Citrus Sinensis ID: 003786

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-----
Protein Sequence
MENLHLLYNFISCVFILSIKLSIAADNITPSRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPDTIVWVANRNSPIFDSNAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQSFDHPSDTLLAGMKLGWDLKTGLERYQTSWKSDDDPSPGNYTHRLDIHVLPKLCTYNGSVKLLCSGPWNGAIFAAIPSYSYLYKPTVVDNEDEIYYRYDSYNSPVIMTLKLNPSGKIQHLIWNERNRTWEAFFSLPDRFCQFYGHCGANSICSFDKKPHCECLKGFELKSHHNKTRPGTCVRSQSSDCKSGDRFIMLDDVKLPDFVEASLNESMNVKECEAECLKNCTCRAYANSKVTGEGSGCLMWFGDLIDIRKADDRNNGQSIYIRVPASELETKKSQDMLQFDINMSIATRANELCKGNKAANSRTRDSWFPMFSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPRQPAFSSIRGLKNTILPANGKARVCSGNCLTLSEMDAR
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHHccccccccccccccccccccEEEEcccEEEEEEcccccccccEEEEEEcccccEEEEEccccccccccccEEEEEEccEEEEEcccccEEEEEcccccccccEEEEEccccEEEEcccccccccccEEEcccccccccccccEEEEEcccccEEEEEEcccccccccccEEEEEEcccccEEEEEEccEEEEEEEcccccEEEEcccccccEEEEEEEcccEEEEEEEEccccEEEEEEEcccccEEEEEEEcccccEEEEEEccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccEEEEcccccccccccEEcccccHHHHHHHHHccccEEEEEcccccccccEEEEEccccccccccccccccEEEEEEEcccccccccccccEEEEEEEHHHHHHHHHHHccccccccccccccccccHHHHHHHHcccccccccccccccccEEEEcccccEEEEEEccccccccHHHHHHHHHHHHHHccccccEEEEccccccEEEEEEEEccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccccEEccccccccccccccccccccccccHHHcccccccccccEEEEEcccccHHHHcccccEEEccEEEHHEEEEEEEcccccccccccccccHHHHHHHHHccccccccccccccccccHHHHHHEEEEEEEcccccccccccHHHHHHHHcccccccccccccEEEEccccccccccccccccccccccEEEEEEEcc
Secondary Structure Prediction (SSPRO)
cccHHHHEEEEEHHHHHHHHHcccccccccccccccccEEEccccEEEEEEEcccccccEEEEEEEEccccEEEEEEccccccccccEEEEEccccEEEEEEccccEEEEccccccccccEEEEEccccEEEEEcccccccccEEEEcccccccccccccEccccccccccEEEEEcccccccccccEEEEEccccccEEEEEcccEEEEEccccccEEEccccccccEEEEEEEEcccEEEEEEEEEcccEEEEEEEccccEEEEEEEEcccccEEEEEEccccccccHcccccccEEccccccccccccccccccHcHcccccccEEcccccccccccEEEEccccccccccEEEcccccHHHHHHHHHHcccEEEEEEEcccccccEEEEEEcccEHHHHccccccccEEEEEEcHHHHHHccccHHHHHHHHHEHEHEEEEEEcccccccccccccccccEcHHHHHHHHcccccccccccccccccEccEcccccEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEcccccccEEEEcccccccccHHHHHHHHHHHHHHHHHHHHccHccEEcccccHHHEEEcccccEEEccccccEEccHHcccccccEEEEEccHccHHHHHHccccHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHccccHHHHcHHHcccccHHHHHHHHHHHHHHHcccccccccccEEEEEEcccccccccccccEEEEEccccccccccccccccccccEEEEEEEccc
Coil and Loop (DISEMBL)
MENLHLLYNFISCVFILSIKLSiaadnitpsrfirdgeklvsssqrfelgffspgkskyryLGIWYKQIPDTIVWVAnrnspifdsnavltisnggklvllnqtngtiwssnlsrevknpvaqlldtgnlvvrdnfssnssedylwqsfdhpsdtlLAGMKLGWDLKTGLERYqtswksdddpspgnythrldihvlpklctyngsvkllcsgpwngaifaaipsysylykptvvdnedeiyyrydsynspvimtlklnpsgkiqHLIWNERNRtweaffslpdrfcqfyghcgansicsfdkkphceclkgfelkshhnktrpgtcvrsqssdcksgdrfimlddvklpdFVEASLNESMNVKECEAeclknctcrayanskvtgegsgclmwfGDLIDirkaddrnngqsiyirvpaseletkksqDMLQFDINMSIATRANELckgnkaansrtrdswfpmFSLASVSAAtanfstenklgeggfgpvykgrllnGQEVAVKRLssqsgqgqeEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYeympnksldfflfdstkenllgwgtRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASnilldkdmnpkisdfgmarifggdelqskTKRIvgtygymspeyaqqGLFSIKSDVFSFGVLLLETLsskrntdfsntnsltLLGHAwdlwkddrawelidptlqnEASYLILNRYINVGLLcvqedaadrptMFEVVSMLTNktinlphprqpafssirglkntilpangkarvcsgncltlsemdar
Flexible Loop (DISEMBL)
MENLHLLYNFISCVFILSIKLSIAADNITPSRFIRDGeklvsssqrfelgffspgkskyRYLGIWYKQIPDTIVWVANRNSPIFDSNAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQSFDHPSDTLLAGMKLGWDLKTGLERYQTswksdddpspgNYTHRLDIHVLPKLCTYNGSVKLLCSGPWNGAIFAAIPSYSYLYKPTVVDNEDEIYYRYDSYNSPVIMTLKLNPSGKIQHLIWNERNRTWEAFFSLPDRFCQFYGHCGANSICSFDKKPHCECLKGFelkshhnktrpgtcvrsqssdcksgDRFIMLDDVKLPDFVEASLNESMNVKECEAECLKNCTCRAYAnskvtgegsgCLMWFGDLIDIRKADDRNNGQSIyirvpaseletkkSQDMLQFDINMSIATRANELCKGNKAANSRTRDSWFPMFSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLssqsgqgqeeFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKAsnilldkdmnpkISDFGMarifggdelqskTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSskrntdfsntnsLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPRQPAFSSIRGLKNTilpangkarvcsgncltlsemdar
Low Complexity Region (SEG)
MENLHLLYNFISCVFILSIKLSIAADNITPSRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPDTIVWVANRNSPIFDSNAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQSFDHPSDTLLAGMKLGWDLKTGLERYQTSWKSDDDPSPGNYTHRLDIHVLPKLCTYNGSVKLLCSGPWNGAIFAAIPSYSYLYKPTVVDNEDEIYYRYDSYNSPVIMTLKLNPSGKIQHLIWNERNRTWEAFFSLPDRFCQFYGHCGANSICSFDKKPHCECLKGFELKSHHNKTRPGTCVRSQSSDCKSGDRFIMLDDVKLPDFVEASLNESMNVKECEAECLKNCTCRAYANSKVTGEGSGCLMWFGDLIDIRKADDRNNGQSIYIRVPASELETKKSQDMLQFDINMSIATRANELCKGNKAANSRTRDSWFPMFSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRllgccieleekiliyeyMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPRQPAFSSIRGLKNTILPANGKARVCSGNCLTLSEMDAR
Disordered region (IsUnstruct)
***LHLLYNFISCVFILSIKLSIAADNITPSRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPDTIVWVANRNSPIFDSNAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSS**SEDYLWQSFDHPSDTLLAGMKLGWDLKTGLERYQTSW*********NYTHRLDIHVLPKLCTYNGSVKLLCSGPWNGAIFAAIPSYSYLYKPTVVDNEDEIYYRYDSYNSPVIMTLKLNPSGKIQHLIWNERNRTWEAFFSLPDRFCQFYGHCGANSICSFDKKPHCECLKGFELK**********************DRFIMLDDVKLPDFVEASLNESMNVKECEAECLKNCTCRAYANSKVTGEGSGCLMWFGDLIDIRKADDRNNGQSIYIRVP************LQFDINMSIATRANELCK**********DSWFPMFSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEV*****************NEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPH****AFSSIRGLKNTILPANGKARVCSGNCLT*******
Disordered Region (DISOPRED)
**NLHLLYNFISCVFILSIKLSIAADNITPSRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPDTIVWVANRNSPIFDSNAVLTISNGGKLVLLNQTNGTIWSSNL******PVAQLLDTGNLVVRDNFSSNSSEDYLWQSFDHPSDTLLAGMKLGWDLKTGLERYQTSWKSDDDPSPGNYTHRLDIHVLPKLCTYNGSVKLLCSGPWNGAIFAAIPSYSYLYKPTVVDNEDEIYYRYDSYNSPVIMTLKLNPSGKIQHLIWNERNRTWEAFFSLPDRFCQFYGHCGANSICSFDKKPHCECLKGFELKSHHNKTRPGTCVRSQSSD*K*GDRFIMLDDVKLPDFVEASLNESMNVKECEAECLKNCTCRAYANSKVTGEGSGCLMWFGDLIDIRKADDRNNGQSIYIRVPASELETKKSQDMLQFDINMSIATRANELC**************FPMFSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPRQPAFS**********************CLTLSEMDAR
Disordered Region (DISEMBL)
MENLHLLYNFISCVFILSIKLSIAADNITPSRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPDTIVWVANRNSPIFDSNAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQSFDHPSDTLLAGMKLGWDLKTGLERY**********SPGNYTHRLDIHVLPKLCTYNGSVKLLCSGPWNGAIFAAIPSYSYLYKPTVVDNEDEIYYRYDSYNSPVIMTLKLNPSGKIQHLIWNERNRTWEAFFSLPDRFCQFYGHCGANSICSFDKKPHCECLKGFELKSH*****************KSGDRFIMLDDVKLPDFVEASLNESMNVKECEAECLKNCTCRAYANSKVTGEGSGCLMWFGDLIDIRKADDRNNGQSIYIRVPASELETKKSQDMLQFDINMSIATRANELCKGNKAANSRTRDSWFPMFSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVK***********EFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPRQPAFSSIRGLKNTILPANGKARVCSGNCLTLSEMDAR
Disordered Region (DISPRO)
*ENLHLLYNFISCVFILSIKLSIAADNITPSRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPDTIVWVANRNSPIFDSNAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQSFDHPSDTLLAGMKLGWDLKTGLERYQTSWKSDDDPSPGNYTHRLDIHVLPKLCTYNGSVKLLCSGPWNGAIFAAIPSYSYLYKPTVVDNEDEIYYRYDSYNSPVIMTLKLNPSGKIQHLIWNERNRTWEAFFSLPDRFCQFYGHCGANSICSFDKKPHCECLKGFELKSHHNKTRPGTCVRSQSSDCKSGDRFIMLDDVKLPDFVEASLNESMNVKECEAECLKNCTCRAYANSKVTGEGSGCLMWFGDLIDIRKADDRNNGQSIYIRVPASELETKKSQDMLQFDINMSIATRANELCKGNKA**SRTRDSWFPMFSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPRQPAFSSIRG**************CSGNCLTLSEMDA*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MENLHLLYNFISCVFILSIKLSIAADNITPSRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPDTIVWVANRNSPIFDSNAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQSFDHPSDTLLAGMKLGWDLKTGLERYQTSWKSDDDPSPGNYTHRLDIHVLPKLCTYNGSVKLLCSGPWNGAIFAAIPSYSYLYKPTVVDNEDEIYYRYDSYNSPVIMTLKLNPSGKIQHLIWNERNRTWEAFFSLPDRFCQFYGHCGANSICSFDKKPHCECLKGFELKSHHNKTRPGTCVRSQSSDCKSGDRFIMLDDVKLPDFVEASLNESMNVKECEAECLKNCTCRAYANSKVTGEGSGCLMWFGDLIDIRKADDRNNGQSIYIRVPASELETKKSQDMLQFDINMSIATRANELCKGNKAANSRTRDSWFPMFSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPRQPAFSSIRGLKNTILPANGKARVCSGNCLTLSEMDAR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	795	2.2.26 [Sep-21-2011]
O81832	783	G-type lectin S-receptor-	yes	no	0.963	0.978	0.465	0.0
O81905	850	Receptor-like serine/thre	no	no	0.923	0.863	0.462	0.0
Q9S972	847	Receptor-like serine/thre	no	no	0.969	0.910	0.443	0.0
Q9ZT07	833	G-type lectin S-receptor-	no	no	0.927	0.884	0.450	0.0
O81906	849	G-type lectin S-receptor-	no	no	0.925	0.866	0.446	0.0
Q39086	843	Receptor-like serine/thre	no	no	0.952	0.897	0.438	0.0
Q9LPZ3	845	G-type lectin S-receptor-	no	no	0.927	0.872	0.428	1e-178
Q09092	857	Putative serine/threonine	N/A	no	0.945	0.877	0.427	1e-175
Q9SY89	842	Putative G-type lectin S-	no	no	0.955	0.902	0.418	1e-172
O81833	815	G-type lectin S-receptor-	no	no	0.916	0.894	0.441	1e-171

>sp|O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=3 SV=4

 Score =  691 bits (1783), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/812 (46%), Positives = 519/812 (63%), Gaps = 46/812 (5%)

Query: 1   MENLHLLYNFISCVFILSIKLSIAADNITPSRFIRDGEKLVSSSQRFELGFFSPGKSKYR 60
           ME  ++L+  I  +F  +I L+ A D +  ++ ++DG+ +VS    FE+GFFSPG S+ R
Sbjct: 1   MEATNVLHLLIISLFS-TILLAQATDILIANQTLKDGDTIVSQGGSFEVGFFSPGGSRNR 59

Query: 61  YLGIWYKQIP-DTIVWVANRNSPIFDSNAVLTISNGGKLVLLNQTNGTIWSSNLSR---- 115
           YLGIWYK+I   T+VWVANR+SP++D +  L +S  G L L N  N  IWSS+ S     
Sbjct: 60  YLGIWYKKISLQTVVWVANRDSPLYDLSGTLKVSENGSLCLFNDRNHIIWSSSSSPSSQK 119

Query: 116 -EVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQSFDHPSDTLLAGMKLGWDLKTGLERYQ 174
             ++NP+ Q+LDTGNLVVR+   S   +DY+WQS D+P D  L GMK G +  TGL R+ 
Sbjct: 120 ASLRNPIVQILDTGNLVVRN---SGDDQDYIWQSLDYPGDMFLPGMKYGLNFVTGLNRFL 176

Query: 175 TSWKSDDDPSPGNYTHRLDIHVLPKLCTYNGSVKLLCSGPWNGAIFAAIPSY--SYLYKP 232
           TSW++ DDPS GNYT+++D + +P+      SV +  +GPWNG  F  +P+   + +Y+ 
Sbjct: 177 TSWRAIDDPSTGNYTNKMDPNGVPQFFLKKNSVVVFRTGPWNGLRFTGMPNLKPNPIYRY 236

Query: 233 TVVDNEDEIYYRYDSYNSPVIMTLKLNPSGKIQHLIWNERNRTWEAFFSLPDRFCQFYGH 292
             V  E+E+YY Y   N  V+  ++LNP+G +Q   W +  ++W  + S     C  Y  
Sbjct: 237 EYVFTEEEVYYTYKLENPSVLTRMQLNPNGALQRYTWVDNLQSWNFYLSAMMDSCDQYTL 296

Query: 293 CGANSICSFDKKPHCECLKGFELKSHHNKTR---PGTCVRSQSSDCKSG-DRFIMLDDVK 348
           CG+   C+ ++ P C CLKGF  K+            CVR    DC  G D F+ +  +K
Sbjct: 297 CGSYGSCNINESPACRCLKGFVAKTPQAWVAGDWSEGCVRRVKLDCGKGEDGFLKISKLK 356

Query: 349 LPDFVEASLNESMNVKECEAECLKNCTCRAYANSKVTGEGSGCLMWFGDLIDIRKADDRN 408
           LPD   +  +++M++ EC+  CL+NCTC AY+   +   G GC++WFGDLIDIR+ ++  
Sbjct: 357 LPDTRTSWYDKNMDLNECKKVCLRNCTCSAYSPFDIRDGGKGCILWFGDLIDIREYNE-- 414

Query: 409 NGQSIYIRVPASELETKKSQDMLQFDINMSIATRANELCKGNKAANSRTRDSWFPMFSLA 468
           NGQ +Y+R+ +SE+ET + +       +  +++R  E             D   P   L 
Sbjct: 415 NGQDLYVRLASSEIETLQRE-------SSRVSSRKQE-----------EEDLELPFLDLD 456

Query: 469 SVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKL 528
           +VS AT+ FS  NKLG+GGFGPVYKG L  GQEVAVKRLS  S QG EEFKNEIKLIAKL
Sbjct: 457 TVSEATSGFSAGNKLGQGGFGPVYKGTLACGQEVAVKRLSRTSRQGVEEFKNEIKLIAKL 516

Query: 529 QHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLL 588
           QHRNLV++LG C++ EE++LIYEY PNKSLD F+FD  +   L W  RV II+GIA+G+L
Sbjct: 517 QHRNLVKILGYCVDEEERMLIYEYQPNKSLDSFIFDKERRRELDWPKRVEIIKGIARGML 576

Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSP 648
           YLH+ SRLR+IHRDLKASN+LLD DMN KISDFG+AR  GGDE ++ T R+VGTYGYMSP
Sbjct: 577 YLHEDSRLRIIHRDLKASNVLLDSDMNAKISDFGLARTLGGDETEANTTRVVGTYGYMSP 636

Query: 649 EYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSN-TNSLTLLGHAWDLWKDDRAWELID 707
           EY   G FS+KSDVFSFGVL+LE +S +RN  F N  + L LLGHAW  + +D+A+E+ID
Sbjct: 637 EYQIDGYFSLKSDVFSFGVLVLEIVSGRRNRGFRNEEHKLNLLGHAWRQFLEDKAYEIID 696

Query: 708 PTLQNEASYLI--LNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPRQPAFSSI 765
             + NE+   I  + R I++GLLCVQ+D  DRP M  VV ++ +  + L  PRQP F + 
Sbjct: 697 EAV-NESCTDISEVLRVIHIGLLCVQQDPKDRPNM-SVVVLMLSSEMLLLDPRQPGFFNE 754

Query: 766 RGL--KNTILPANGKARVCSGNCLTLSEMDAR 795
           R L   +T+   +    + S N  T+S +D R
Sbjct: 755 RNLLFSDTV---SINLEIPSNNFQTMSVIDPR 783

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|O81905|SD18_ARATH Receptor-like serine/threonine-protein kinase SD1-8 OS=Arabidopsis thaliana GN=SD18 PE=1 SV=1

 Score =  664 bits (1714), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/797 (46%), Positives = 493/797 (61%), Gaps = 63/797 (7%)

Query: 22  SIAADNITPSR--FIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPD-TIVWVAN 78
           SI+A+ ++ S    I     +VS    FELGFF PG     YLGIWYK I   T VWVAN
Sbjct: 26  SISANTLSASESLTISSNNTIVSPGNVFELGFFKPGLDSRWYLGIWYKAISKRTYVWVAN 85

Query: 79  RNSPIFDSNAVLTISNGGKLVLLNQTNGTIWSSNLSR-EVKNP-VAQLLDTGNLVVRDNF 136
           R++P+  S   L IS+   LV+L+Q++  +WS+NL+  +V++P VA+LLD GN V+RD  
Sbjct: 86  RDTPLSSSIGTLKISDS-NLVVLDQSDTPVWSTNLTGGDVRSPLVAELLDNGNFVLRD-- 142

Query: 137 SSNSSED-YLWQSFDHPSDTLLAGMKLGWDLKTGLERYQTSWKSDDDPSPGNYTHRLDIH 195
           S NS+ D  LWQSFD P+DTLL  MKLGWD KTG  R+  SWKS DDPS G+++ +L+  
Sbjct: 143 SKNSAPDGVLWQSFDFPTDTLLPEMKLGWDAKTGFNRFIRSWKSPDDPSSGDFSFKLETE 202

Query: 196 VLPKLCTYNGSVKLLCSGPWNGAIFAAIPS---YSYLYKPTVVDNEDEIYYRYDSYNSPV 252
             P++  +N   ++  SGPWNG  F+ +P    + Y+       +++E+ Y +    S V
Sbjct: 203 GFPEIFLWNRESRMYRSGPWNGIRFSGVPEMQPFEYMVF-NFTTSKEEVTYSFRITKSDV 261

Query: 253 IMTLKLNPSGKIQHLIWNERNRTWEAFFSLPDRFCQFYGHCGANSICSFDKKPHCECLKG 312
              L ++ SG +Q   W E  + W  F+  P   C  Y  CG    C  +  P C C+KG
Sbjct: 262 YSRLSISSSGLLQRFTWIETAQNWNQFWYAPKDQCDEYKECGVYGYCDSNTSPVCNCIKG 321

Query: 313 FELKSHHN-KTRPGT--CVRSQSSDCKSGDRFIMLDDVKLPDFVEASLNESMNVKECEAE 369
           F+ ++      R G+  CVR     C  GD F+ L  +KLPD   AS++  + VKECE +
Sbjct: 322 FKPRNPQVWGLRDGSDGCVRKTLLSCGGGDGFVRLKKMKLPDTTTASVDRGIGVKECEQK 381

Query: 370 CLKNCTCRAYANSKVTGEGSGCLMWFGDLIDIRKADDRNNGQSIYIRVPASELETKKSQD 429
           CL++C C A+AN+ + G GSGC+ W G+L DIR       GQ +Y+R+ A++LE K+++ 
Sbjct: 382 CLRDCNCTAFANTDIRGSGSGCVTWTGELFDIRNY--AKGGQDLYVRLAATDLEDKRNRS 439

Query: 430 --------------MLQFDI----------NMSIAT-------RANELCKGNKAANSR-- 456
                         +L F I          ++ I T       R+ +L       +SR  
Sbjct: 440 AKIIGSSIGVSVLLLLSFIIFFLWKRKQKRSILIETPIVDHQLRSRDLLMNEVVISSRRH 499

Query: 457 ------TRDSWFPMFSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQ 510
                 T D   P+     V+ AT NFS  NKLG+GGFG VYKG+LL+GQE+AVKRLS  
Sbjct: 500 ISRENNTDDLELPLMEFEEVAMATNNFSNANKLGQGGFGIVYKGKLLDGQEMAVKRLSKT 559

Query: 511 SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENL 570
           S QG +EFKNE+KLIA+LQH NLVRLL CC++  EK+LIYEY+ N SLD  LFD ++ + 
Sbjct: 560 SVQGTDEFKNEVKLIARLQHINLVRLLACCVDAGEKMLIYEYLENLSLDSHLFDKSRNSK 619

Query: 571 LGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD 630
           L W  R  II GIA+GLLYLHQ SR R+IHRDLKASNILLDK M PKISDFGMARIFG D
Sbjct: 620 LNWQMRFDIINGIARGLLYLHQDSRFRIIHRDLKASNILLDKYMTPKISDFGMARIFGRD 679

Query: 631 ELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTN-SLTL 689
           E ++ T+++VGTYGYMSPEYA  G+FS+KSDVFSFGVLLLE +SSKRN  F N++  L L
Sbjct: 680 ETEANTRKVVGTYGYMSPEYAMDGIFSMKSDVFSFGVLLLEIISSKRNKGFYNSDRDLNL 739

Query: 690 LGHAWDLWKDDRAWELIDPTLQNEAS----YLILNRYINVGLLCVQEDAADRPTMFEVVS 745
           LG  W  WK+ +  E+IDP + + +S    + IL R I +GLLCVQE A DRPTM  V+ 
Sbjct: 740 LGCVWRNWKEGKGLEIIDPIITDSSSTFRQHEIL-RCIQIGLLCVQERAEDRPTMSLVIL 798

Query: 746 MLTNKTINLPHPRQPAF 762
           ML +++  +P P+ P +
Sbjct: 799 MLGSESTTIPQPKAPGY 815

Involved in the regulation of cellular expansion and differentiation.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9S972|SD16_ARATH Receptor-like serine/threonine-protein kinase SD1-6 OS=Arabidopsis thaliana GN=SD16 PE=1 SV=2

 Score =  662 bits (1709), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/829 (44%), Positives = 501/829 (60%), Gaps = 58/829 (6%)

Query: 21  LSIAADNI--TPSRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIP-DTIVWVA 77
            S+ A N   T S  I   + ++S SQ FELGFF+P  S   YLGIWYK IP  T VWVA
Sbjct: 23  FSVYASNFSATESLTISSNKTIISPSQIFELGFFNPDSSSRWYLGIWYKIIPIRTYVWVA 82

Query: 78  NRNSPIFDSNAVLTISNGGKLVLLNQTNGTIWSSNLSR-EVKNPVA-QLLDTGNLVVRDN 135
           NR++P+  SN  L IS+   LV+ +Q++  +WS+N++  +V++PVA +LLD GN V+RD+
Sbjct: 83  NRDNPLSSSNGTLKISDN-NLVIFDQSDRPVWSTNITGGDVRSPVAAELLDYGNFVLRDS 141

Query: 136 FSSNSSEDYLWQSFDHPSDTLLAGMKLGWDLKTG-LERYQTSWKSDDDPSPGNYTHRLDI 194
             +N    +LWQSFD P+DTLL+ MK+GWD K+G   R   SWK+ DDPS G+++ +L  
Sbjct: 142 -KNNKPSGFLWQSFDFPTDTLLSDMKMGWDNKSGGFNRILRSWKTTDDPSSGDFSTKLRT 200

Query: 195 HVLPKLCTYNGSVKLLCSGPWNGAIFAAIPSYSYL--YKPTVVDNEDEIYYRYDSYNSPV 252
              P+   YN       SGPW G  F+++P    +     +  +N  ++ Y Y    + +
Sbjct: 201 SGFPEFYIYNKESITYRSGPWLGNRFSSVPGMKPVDYIDNSFTENNQQVVYSYRVNKTNI 260

Query: 253 IMTLKLNPSGKIQHLIWNERNRTWEAFFSLPDRFCQFYGHCGANSICSFDKKPHCECLKG 312
              L L+ +G +Q L W E  ++W+  +  P   C  Y  CG    C  +  P C C+KG
Sbjct: 261 YSILSLSSTGLLQRLTWMEAAQSWKQLWYSPKDLCDNYKECGNYGYCDANTSPICNCIKG 320

Query: 313 FELKSHHNKTRPGT--CVRSQSSDCKSGDRFIMLDDVKLPDFVEASLNESMNVKECEAEC 370
           FE  +     R  +  CVR     C   D F+ L  ++LPD  E S+++ + +KECE  C
Sbjct: 321 FEPMNEQAALRDDSVGCVRKTKLSCDGRDGFVRLKKMRLPDTTETSVDKGIGLKECEERC 380

Query: 371 LKNCTCRAYANSKVTGEGSGCLMWFGDLIDIRKADDRNNGQSIYIRVPASELETK--KSQ 428
           LK C C A+AN+ +   GSGC++W G L DIR       GQ +Y+RV A +LE K  KS+
Sbjct: 381 LKGCNCTAFANTDIRNGGSGCVIWSGGLFDIRNY--AKGGQDLYVRVAAGDLEDKRIKSK 438

Query: 429 DMLQFDINMSIA---------------------------------TRANELCKGNKAANS 455
            ++   I +SI                                  +  NEL K +++  S
Sbjct: 439 KIIGSSIGVSILLLLSFIIFHFWKRKQKRSITIQTPIVDLVRSQDSLMNELVKASRSYTS 498

Query: 456 RTRDSWF---PMFSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSG 512
           +   + +   P+    +++ AT NFST+NKLG+GGFG VYKG LL+G+E+AVKRLS  S 
Sbjct: 499 KENKTDYLELPLMEWKALAMATNNFSTDNKLGQGGFGIVYKGMLLDGKEIAVKRLSKMSS 558

Query: 513 QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLG 572
           QG +EF NE++LIAKLQH NLVRLLGCC++  EK+LIYEY+ N SLD  LFD T+ + L 
Sbjct: 559 QGTDEFMNEVRLIAKLQHINLVRLLGCCVDKGEKMLIYEYLENLSLDSHLFDQTRSSNLN 618

Query: 573 WGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL 632
           W  R  II GIA+GLLYLHQ SR R+IHRDLKASN+LLDK+M PKISDFGMARIFG +E 
Sbjct: 619 WQKRFDIINGIARGLLYLHQDSRCRIIHRDLKASNVLLDKNMTPKISDFGMARIFGREET 678

Query: 633 QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTN-SLTLLG 691
           ++ T+R+VGTYGYMSPEYA  G+FS+KSDVFSFGVLLLE +S KRN  F N+N  L LLG
Sbjct: 679 EANTRRVVGTYGYMSPEYAMDGIFSMKSDVFSFGVLLLEIISGKRNKGFYNSNRDLNLLG 738

Query: 692 HAWDLWKDDRAWELIDP----TLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML 747
             W  WK+ +  E++DP     L +E     + R I +GLLCVQE A DRP M  V+ ML
Sbjct: 739 FVWRHWKEGKELEIVDPINIDALSSEFPTHEILRCIQIGLLCVQERAEDRPVMSSVMVML 798

Query: 748 TNKTINLPHPRQPAFSSIR-GLKNTILPANGKARVCSGNCLTLSEMDAR 795
            ++T  +P P++P F   R  L+     +  +   C+ N +TLS +DAR
Sbjct: 799 GSETTAIPQPKRPGFCVGRSSLEVDSSSSTQRDDECTVNQVTLSVIDAR 847

Involved in the regulation of cellular expansion and differentiation.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9ZT07|RKS1_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 OS=Arabidopsis thaliana GN=RKS1 PE=2 SV=3

 Score =  658 bits (1697), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/795 (45%), Positives = 487/795 (61%), Gaps = 58/795 (7%)

Query: 23  IAADNITPSRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPD-TIVWVANRNS 81
           I+ D I   + +RDGE ++S+ +RF  GFFS G S+ RY+GIWY QI   TIVWVANR+ 
Sbjct: 17  ISVDTIMRRQSLRDGEVILSAGKRFAFGFFSLGDSELRYVGIWYAQISQQTIVWVANRDH 76

Query: 82  PIFDSNAVLTISNGGKLVLLNQTNGT--IWSSNLSREVKNP--VAQLLDTGNLVVRDNFS 137
           PI D++ ++  SN G L +    N T  IWS+N+S  +  P  VA L D GNLV+ D  +
Sbjct: 77  PINDTSGMVKFSNRGNLSVYASDNETELIWSTNVSDSMLEPTLVATLSDLGNLVLFDPVT 136

Query: 138 SNSSEDYLWQSFDHPSDTLLAGMKLGWDLKTGLERYQTSWKSDDDPSPGNYTHRLDIHVL 197
             S     W+SFDHP+DT L  M+LG+  K GL+R  TSWKS  DP  G+   R++    
Sbjct: 137 GRS----FWESFDHPTDTFLPFMRLGFTRKDGLDRSLTSWKSHGDPGSGDLILRMERRGF 192

Query: 198 PKLCTYNGSVKLLCSGPWNGAIFAAIPSY--SYLYKPTVVDNEDEIYYRYDSYNSPVIMT 255
           P+L  Y G       G W G  ++ +P     Y++  + V+NEDE+ + Y   ++ VI  
Sbjct: 193 PQLILYKGVTPWWRMGSWTGHRWSGVPEMPIGYIFNNSFVNNEDEVSFTYGVTDASVITR 252

Query: 256 LKLNPSGKIQHLIWNERNRTWEAFFSLPDRFCQFYGHCGANSICSF--DKKPHCECLKGF 313
             +N +G +    W  R++ W  F+S+P   C  Y HCG N  C     K   C CL GF
Sbjct: 253 TMVNETGTMHRFTWIARDKRWNDFWSVPKEQCDNYAHCGPNGYCDSPSSKTFECTCLPGF 312

Query: 314 ELKSHHN---KTRPGTCVRSQ-SSDCKSGDRFIMLDDVKLPDFVEASLNESMNVKECEAE 369
           E K   +   +   G C + + +S C   D F+ L  +K+PD  +AS++ ++ +KEC+  
Sbjct: 313 EPKFPRHWFLRDSSGGCTKKKRASICSEKDGFVKLKRMKIPDTSDASVDMNITLKECKQR 372

Query: 370 CLKNCTCRAYANS-KVTGEGS-GCLMWFGDLIDIRKADDRNNGQSIYIRVPASELET--- 424
           CLKNC+C AYA++   +  G+ GCL W G ++D R     N+GQ  YIRV   EL     
Sbjct: 373 CLKNCSCVAYASAYHESKRGAIGCLKWHGGMLDARTY--LNSGQDFYIRVDKEELARWNR 430

Query: 425 ---KKSQDMLQFDINMSIATR---------ANELCKGNKAANS----------------- 455
                 + +L   I++  A             E  K N+  +S                 
Sbjct: 431 NGLSGKRRVLLILISLIAAVMLLTVILFCVVRERRKSNRHRSSSANFAPVPFDFDESFRF 490

Query: 456 ---RTRDSWFPMFSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSG 512
              + R+   P+F L ++ AAT NFS++NKLG GGFGPVYKG L N  E+AVKRLS  SG
Sbjct: 491 EQDKARNRELPLFDLNTIVAATNNFSSQNKLGAGGFGPVYKGVLQNRMEIAVKRLSRNSG 550

Query: 513 QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLG 572
           QG EEFKNE+KLI+KLQHRNLVR+LGCC+ELEEK+L+YEY+PNKSLD+F+F   +   L 
Sbjct: 551 QGMEEFKNEVKLISKLQHRNLVRILGCCVELEEKMLVYEYLPNKSLDYFIFHEEQRAELD 610

Query: 573 WGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL 632
           W  R+ I+ GIA+G+LYLHQ SRLR+IHRDLKASNILLD +M PKISDFGMARIFGG+++
Sbjct: 611 WPKRMEIVRGIARGILYLHQDSRLRIIHRDLKASNILLDSEMIPKISDFGMARIFGGNQM 670

Query: 633 QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGH 692
           +  T R+VGT+GYM+PEYA +G FSIKSDV+SFGVL+LE ++ K+N+ F   +S  L+GH
Sbjct: 671 EGCTSRVVGTFGYMAPEYAMEGQFSIKSDVYSFGVLMLEIITGKKNSAFHEESS-NLVGH 729

Query: 693 AWDLWKDDRAWELIDPTLQNEA-SYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKT 751
            WDLW++  A E+ID  +  E      + + I +GLLCVQE+A+DR  M  VV ML +  
Sbjct: 730 IWDLWENGEATEIIDNLMDQETYDEREVMKCIQIGLLCVQENASDRVDMSSVVIMLGHNA 789

Query: 752 INLPHPRQPAFSSIR 766
            NLP+P+ PAF+S R
Sbjct: 790 TNLPNPKHPAFTSAR 804

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O81906|B120_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase B120 OS=Arabidopsis thaliana GN=B120 PE=1 SV=1

 Score =  641 bits (1653), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/815 (44%), Positives = 492/815 (60%), Gaps = 79/815 (9%)

Query: 22  SIAADNITPSRFIRDG---EKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPD-TIVWVA 77
           S+AA+ I     +RDG   + LVS  + FELGFFSPG S +R+LGIWY  I D  +VWVA
Sbjct: 23  SMAANTIRRGESLRDGINHKPLVSPQKTFELGFFSPGSSTHRFLGIWYGNIEDKAVVWVA 82

Query: 78  NRNSPIFDSNAVLTISNGGKLVLLNQTNGTIWSSNLSREV---KNPVAQLLDTGNLVVRD 134
           NR +PI D + VL ISN G LVLL+  N T+WSSN+        N V  + DTGN V+  
Sbjct: 83  NRATPISDQSGVLMISNDGNLVLLDGKNITVWSSNIESSTTNNNNRVVSIHDTGNFVL-- 140

Query: 135 NFSSNSSEDYLWQSFDHPSDTLLAGMKLGWDLKTGLERYQTSWKSDDDPSPGNYTHRLDI 194
             S   ++  +W+SF+HP+DT L  M++  + +TG      SW+S+ DPSPGNY+  +D 
Sbjct: 141 --SETDTDRPIWESFNHPTDTFLPQMRVRVNPQTGDNHAFVSWRSETDPSPGNYSLGVDP 198

Query: 195 HVLPKLCTYNGS-VKLLCSGPWNGAIFAAIPSYS----YLYKPTVVDNEDE---IYYRYD 246
              P++  + G+  +   SG WN AIF  IP+ S    YLY   +    DE   +Y+ Y 
Sbjct: 199 SGAPEIVLWEGNKTRKWRSGQWNSAIFTGIPNMSLLTNYLYGFKLSSPPDETGSVYFTYV 258

Query: 247 SYNSPVIMTLKLNPSGKIQHLIWNERNRTWEAFFSLPDRFCQFYGHCGANSICSFD-KKP 305
             +  V++  K+  +G  + L WNE  + W  F S PD  C  Y  CG   IC       
Sbjct: 259 PSDPSVLLRFKVLYNGTEEELRWNETLKKWTKFQSEPDSECDQYNRCGKFGICDMKGSNG 318

Query: 306 HCECLKGFELKSHHNKTRPGTCVRSQSSDCKSG-----DRFIMLDDVKLPDFVEASLNES 360
            C C+ G+E  S  N +R   C R     C+       D F+ L  VKLPDF E   +  
Sbjct: 319 ICSCIHGYEQVSVGNWSR--GCRRRTPLKCERNISVGEDEFLTLKSVKLPDF-EIPEHNL 375

Query: 361 MNVKECEAECLKNCTCRAYANSKVTGEGSGCLMWFGDLIDIRKADDRNNGQSIYIRVPAS 420
           ++ ++C   CL+NC+C AY+   + G G GC++W  DL+D+++ +    G S++IR+  S
Sbjct: 376 VDPEDCRERCLRNCSCNAYS---LVG-GIGCMIWNQDLVDLQQFE--AGGSSLHIRLADS 429

Query: 421 EL-ETKKSQDMLQFDI------------------------------NMSIATRANELCKG 449
           E+ E +K++  +   +                              N   +    +L K 
Sbjct: 430 EVGENRKTKIAVIVAVLVGVILIGIFALLLWRFKRKKDVSGAYCGKNTDTSVVVADLTKS 489

Query: 450 NKAANS------------RTRDSWFPMFSLASVSAATANFSTENKLGEGGFGPVYKGRLL 497
            +  ++                S  P+FSL +++ AT +F  EN+LG GGFGPVYKG L 
Sbjct: 490 KETTSAFSGSVDIMIEGKAVNTSELPVFSLNAIAIATNDFCKENELGRGGFGPVYKGVLE 549

Query: 498 NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKS 557
           +G+E+AVKRLS +SGQG +EFKNEI LIAKLQHRNLVRLLGCC E EEK+L+YEYMPNKS
Sbjct: 550 DGREIAVKRLSGKSGQGVDEFKNEIILIAKLQHRNLVRLLGCCFEGEEKMLVYEYMPNKS 609

Query: 558 LDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPK 617
           LDFFLFD TK+ L+ W  R  IIEGIA+GLLYLH+ SRLR+IHRDLK SN+LLD +MNPK
Sbjct: 610 LDFFLFDETKQALIDWKLRFSIIEGIARGLLYLHRDSRLRIIHRDLKVSNVLLDAEMNPK 669

Query: 618 ISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKR 677
           ISDFGMARIFGG++ ++ T R+VGTYGYMSPEYA +GLFS+KSDV+SFGVLLLE +S KR
Sbjct: 670 ISDFGMARIFGGNQNEANTVRVVGTYGYMSPEYAMEGLFSVKSDVYSFGVLLLEIVSGKR 729

Query: 678 NTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADR 737
           NT   ++   +L+G+AW L+   R+ EL+DP ++   S     R I+V +LCVQ+ AA+R
Sbjct: 730 NTSLRSSEHGSLIGYAWYLYTHGRSEELVDPKIRVTCSKREALRCIHVAMLCVQDSAAER 789

Query: 738 PTMFEVVSMLTNKTINLPHPRQPAFSSIRGLKNTI 772
           P M  V+ ML + T  L  PRQP F+S R  +N+I
Sbjct: 790 PNMASVLLMLESDTATLAAPRQPTFTSTR--RNSI 822

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q39086|SD17_ARATH Receptor-like serine/threonine-protein kinase SD1-7 OS=Arabidopsis thaliana GN=SD17 PE=1 SV=1

 Score =  637 bits (1642), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/821 (43%), Positives = 495/821 (60%), Gaps = 64/821 (7%)

Query: 29  TPSRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIP-DTIVWVANRNSPIFDSN 87
           T S  I   + ++S SQ FELGFF+P  S   YLGIWYK IP  T VWVANR++P+  SN
Sbjct: 33  TESLTISSNKTIISPSQIFELGFFNPASSSRWYLGIWYKIIPIRTYVWVANRDNPLSSSN 92

Query: 88  AVLTISNGGKLVLLNQTNGTIWSSNLSR-EVKNPVA-QLLDTGNLVVRDNFSSNSSEDYL 145
             L IS G  LV+ +Q++  +WS+N++  +V++PVA +LLD GN ++RD     S+   L
Sbjct: 93  GTLKIS-GNNLVIFDQSDRPVWSTNITGGDVRSPVAAELLDNGNFLLRD-----SNNRLL 146

Query: 146 WQSFDHPSDTLLAGMKLGWDLKTGLERYQTSWKSDDDPSPGNYTHRLDIHVLPKLCTYNG 205
           WQSFD P+DTLLA MKLGWD KTG  R   SWK+ DDPS G ++ +L+    P+    + 
Sbjct: 147 WQSFDFPTDTLLAEMKLGWDQKTGFNRILRSWKTTDDPSSGEFSTKLETSEFPEFYICSK 206

Query: 206 SVKLLCSGPWNGAIFAAIP---SYSYL-YKPTVVDNEDEIYYRYDSYNSPVIMTLKLNPS 261
              L  SGPWNG  F+++P      Y+ Y  T   +++E+ Y Y    + +   L LN +
Sbjct: 207 ESILYRSGPWNGMRFSSVPGTIQVDYMVYNFTA--SKEEVTYSYRINKTNLYSRLYLNSA 264

Query: 262 GKIQHLIWNERNRTWEAFFSLPDRFCQFYGHCGANSICSFDKKPHCECLKGFE-LKSHHN 320
           G +Q L W E  ++W+  +  P   C  Y  CG    C  +  P+C C+KGF+ +     
Sbjct: 265 GLLQRLTWFETTQSWKQLWYSPKDLCDNYKVCGNFGYCDSNSLPNCYCIKGFKPVNEQAW 324

Query: 321 KTRPGT--CVRSQSSDCKSGDRFIMLDDVKLPDFVEASLNESMNVKECEAECLKNCTCRA 378
             R G+  C+R     C   D F  L  +KLPD     ++  + +K C+  CL++C C A
Sbjct: 325 DLRDGSAGCMRKTRLSCDGRDGFTRLKRMKLPDTTATIVDREIGLKVCKERCLEDCNCTA 384

Query: 379 YANSKVTGEGSGCLMWFGDLIDIRKADDRNNGQSIYIRVPASELETK--KSQDMLQFDIN 436
           +AN+ +   GSGC++W  +++D+R       GQ +Y+R+ A+ELE K  K++ ++   I 
Sbjct: 385 FANADIRNGGSGCVIWTREILDMRNY--AKGGQDLYVRLAAAELEDKRIKNEKIIGSSIG 442

Query: 437 MSIA---------------------------------TRANELCKGNKAANSRTRDSWFP 463
           +SI                                  +  N++    +   S+ + S + 
Sbjct: 443 VSILLLLSFVIFHFWKRKQKRSITIQTPNVDQVRSQDSLINDVVVSRRGYTSKEKKSEYL 502

Query: 464 MFSLASV---SAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKN 520
              L  +   + AT NFS +NKLG+GGFG VYKGRLL+G+E+AVKRLS  S QG +EF N
Sbjct: 503 ELPLLELEALATATNNFSNDNKLGQGGFGIVYKGRLLDGKEIAVKRLSKMSSQGTDEFMN 562

Query: 521 EIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRII 580
           E++LIAKLQH NLVRLLGCC++  EK+LIYEY+ N SLD  LFD T+ + L W  R  II
Sbjct: 563 EVRLIAKLQHINLVRLLGCCVDKGEKMLIYEYLENLSLDSHLFDQTRSSNLNWQKRFDII 622

Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIV 640
            GIA+GLLYLHQ SR R+IHRDLKASN+LLDK+M PKISDFGMARIFG +E ++ T+R+V
Sbjct: 623 NGIARGLLYLHQDSRCRIIHRDLKASNVLLDKNMTPKISDFGMARIFGREETEANTRRVV 682

Query: 641 GTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTN-SLTLLGHAWDLWKD 699
           GTYGYMSPEYA  G+FS+KSDVFSFGVLLLE +S KRN  F N+N  L LLG  W  WK+
Sbjct: 683 GTYGYMSPEYAMDGIFSMKSDVFSFGVLLLEIISGKRNKGFYNSNRDLNLLGFVWRHWKE 742

Query: 700 DRAWELIDP----TLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLP 755
               E++DP    +L ++     + R I +GLLCVQE A DRP M  V+ ML ++T  +P
Sbjct: 743 GNELEIVDPINIDSLSSKFPTHEILRCIQIGLLCVQERAEDRPVMSSVMVMLGSETTAIP 802

Query: 756 HPRQPAFSSIRG-LKNTILPANGKARVCSGNCLTLSEMDAR 795
            P++P F   R  L+     +  +   C+ N +TLS +DAR
Sbjct: 803 QPKRPGFCIGRSPLEADSSSSTQRDDECTVNQITLSVIDAR 843

Involved in the regulation of cellular expansion and differentiation. Mediates subcellular relocalization of PUB9 from nucleus to plasma membrane in a protein-phosphorylation-dependent manner. May be involved in the abscisic acid-mediated signaling pathway, at least during germination.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LPZ3|Y1141_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410 OS=Arabidopsis thaliana GN=At1g11410 PE=3 SV=3

 Score =  626 bits (1614), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 344/803 (42%), Positives = 493/803 (61%), Gaps = 66/803 (8%)

Query: 22  SIAADN-ITPSRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPD-TIVWVANR 79
           S  +DN I  S+ ++DG+ + S  +RF  GFFS G SK RY+GIWY Q+ + TIVWVANR
Sbjct: 18  SCYSDNTILRSQSLKDGDVIYSEGKRFAFGFFSLGNSKLRYVGIWYAQVSEQTIVWVANR 77

Query: 80  NSPIFDSNAVLTISNGGKLVLLNQTNGT--IWSSNLSREVKNP--VAQLLDTGNLVVRDN 135
           + PI D++ ++  S  G L +    NGT  IWS+++   ++ P  VA+L D GNLV+ D 
Sbjct: 78  DHPINDTSGLIKFSTRGNLCVYASGNGTEPIWSTDVIDMIQEPALVAKLSDLGNLVLLDP 137

Query: 136 FSSNSSEDYLWQSFDHPSDTLLAGMKLGWDLKTGLERYQTSWKSDDDPSPGNYTHRLDIH 195
            +  S     W+SF+HP++TLL  MK G+  ++G++R  TSW+S  DP  GN T+R++  
Sbjct: 138 VTGKS----FWESFNHPTNTLLPFMKFGFTRQSGVDRIMTSWRSPGDPGSGNITYRIERR 193

Query: 196 VLPKLCTYNGSVKLLCSGPWNGAIFAAIPSYS--YLYKPTVVDNEDEIYYRYDSYNSPVI 253
             P++  Y G      +G W G  ++ +P  +  +++  + V+N DE+   Y   ++ V 
Sbjct: 194 GFPQMMMYKGLTLWWRTGSWTGQRWSGVPEMTNKFIFNISFVNNPDEVSITYGVLDASVT 253

Query: 254 MTLKLNPSGKIQHLIWNERNRTWEAFFSLPDRFCQFYGHCGANSIC--SFDKKPHCECLK 311
             + LN +G +Q   WN R++ W  F+S P+  C  Y HCG N  C  +  +K  C CL 
Sbjct: 254 TRMVLNETGTLQRFRWNGRDKKWIGFWSAPEDKCDIYNHCGFNGYCDSTSTEKFECSCLP 313

Query: 312 GFELKSHHN---KTRPGTCVRSQS-SDCKSGDRFIMLDDVKLPDFVEASLNESMNVKECE 367
           G+E K+  +   +     C R ++ S C   + F  L  VK+P+    +++ ++ +KECE
Sbjct: 314 GYEPKTPRDWFLRDASDGCTRIKADSICNGKEGFAKLKRVKIPNTSAVNVDMNITLKECE 373

Query: 368 AECLKNCTCRAYANSKVTGE--GSGCLMWFGDLIDIRKADDRNNGQSIYIRVPASEL--- 422
             CLKNC+C AYA++    +    GCL W G+++D R     ++GQ  Y+RV  SEL   
Sbjct: 374 QRCLKNCSCVAYASAYHESQDGAKGCLTWHGNMLDTRTY--LSSGQDFYLRVDKSELARW 431

Query: 423 -----ETKKSQDMLQFDINMSIA----------------TRANELCKGNKA--------- 452
                  KK   ++   +   +                 T++N L K   +         
Sbjct: 432 NGNGASGKKRLVLILISLIAVVMLLLISFHCYLRKRRQRTQSNRLRKAPSSFAPSSFDLE 491

Query: 453 -------ANSRTRDSWFPMFSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVK 505
                     ++R    P+F L++++ AT NF+ +NKLG GGFGPVYKG L NG E+AVK
Sbjct: 492 DSFILEELEDKSRSRELPLFELSTIATATNNFAFQNKLGAGGFGPVYKGVLQNGMEIAVK 551

Query: 506 RLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDS 565
           RLS  SGQG EEFKNE+KLI+KLQHRNLVR+LGCC+E EEK+L+YEY+PNKSLD+F+F  
Sbjct: 552 RLSKSSGQGMEEFKNEVKLISKLQHRNLVRILGCCVEFEEKMLVYEYLPNKSLDYFIFHE 611

Query: 566 TKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR 625
            +   L W  R+ II GI +G+LYLHQ SRLR+IHRDLKASN+LLD +M PKI+DFG+AR
Sbjct: 612 EQRAELDWPKRMGIIRGIGRGILYLHQDSRLRIIHRDLKASNVLLDNEMIPKIADFGLAR 671

Query: 626 IFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTN 685
           IFGG++++  T R+VGTYGYMSPEYA  G FSIKSDV+SFGVL+LE ++ KRN+ F    
Sbjct: 672 IFGGNQIEGSTNRVVGTYGYMSPEYAMDGQFSIKSDVYSFGVLILEIITGKRNSAFYE-E 730

Query: 686 SLTLLGHAWDLWKDDRAWELIDPTLQNEASY--LILNRYINVGLLCVQEDAADRPTMFEV 743
           SL L+ H WD W++  A E+ID  L  E +Y    + + +++GLLCVQE+++DRP M  V
Sbjct: 731 SLNLVKHIWDRWENGEAIEIID-KLMGEETYDEGEVMKCLHIGLLCVQENSSDRPDMSSV 789

Query: 744 VSMLTNKTINLPHPRQPAFSSIR 766
           V ML +  I+LP P+ PAF++ R
Sbjct: 790 VFMLGHNAIDLPSPKHPAFTAGR 812

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q09092|SRK6_BRAOE Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=2

 Score =  615 bits (1587), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 350/819 (42%), Positives = 487/819 (59%), Gaps = 67/819 (8%)

Query: 5   HLLYNFISCVFILSI----KLSIAADNI--TPSRFIRDGEKLVSSSQRFELGFFSPGKSK 58
           H  Y     VF++ I     LSI  + +  T S  I   + LVS    FE+GFF    S+
Sbjct: 9   HHSYMSFLLVFVVMILIHPALSIYINTLSSTESLTISSNKTLVSPGSIFEVGFFRTN-SR 67

Query: 59  YRYLGIWYKQIPD-TIVWVANRNSPIFDSNAVLTISNGGKLVLLNQTNGTIWSSNLSR-- 115
           + YLG+WYK++ D T VWVANR++P+ ++   L IS G  LVLL+ +N  +W +NL+R  
Sbjct: 68  W-YLGMWYKKVSDRTYVWVANRDNPLSNAIGTLKIS-GNNLVLLDHSNKPVWWTNLTRGN 125

Query: 116 EVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQSFDHPSDTLLAGMKLGWDLKTGLERYQT 175
           E    VA+LL  GN V+RD+ S+N + +YLWQSFD+P+DTLL  MKLG++LKTGL R+ T
Sbjct: 126 ERSPVVAELLANGNFVMRDS-SNNDASEYLWQSFDYPTDTLLPEMKLGYNLKTGLNRFLT 184

Query: 176 SWKSDDDPSPGNYTHRLDIHVLPKLCTYNGSVKLLCSGPWNGAIFAAIPS---YSYLYKP 232
           SW+S DDPS GN++++L+   LP+      +  +  SGPWNG  F+ IP     SY+   
Sbjct: 185 SWRSSDDPSSGNFSYKLETQSLPEFYLSRENFPMHRSGPWNGIRFSGIPEDQKLSYMVY- 243

Query: 233 TVVDNEDEIYYRYDSYNSPVIMTLKLNPSGKIQHLIWNERNRTWEAFFSLP-DRFCQFYG 291
             ++N +E+ Y +   N+     L L   G  Q L W    R W  F+S P D  C  Y 
Sbjct: 244 NFIENNEEVAYTFRMTNNSFYSRLTLISEGYFQRLTWYPSIRIWNRFWSSPVDPQCDTYI 303

Query: 292 HCGANSICSFDKKPHCECLKGFE---LKSHHNKTRPGTCVRSQSSDCKSGDRFIMLDDVK 348
            CG  + C  +  P C C++GF    ++    +   G C+R     C SGD F  +  +K
Sbjct: 304 MCGPYAYCDVNTSPVCNCIQGFNPRNIQQWDQRVWAGGCIRRTQLSC-SGDGFTRMKKMK 362

Query: 349 LPDFVEASLNESMNVKECEAECLKNCTCRAYANSKVTGEGSGCLMWFGDLIDIRK-ADDR 407
           LP+   A+++ S+ VKEC+  C+ +C C A+AN+ +   GSGC++W   L DIR  A D 
Sbjct: 363 LPETTMATVDRSIGVKECKKRCISDCNCTAFANADIRNGGSGCVIWTERLEDIRNYATDA 422

Query: 408 NNGQSIYIRVPASELETKK--SQDMLQFDINMSIA------------------------- 440
            +GQ +Y+R+ A+++  K+  S  ++   + +S+                          
Sbjct: 423 IDGQDLYVRLAAADIAKKRNASGKIISLTVGVSVLLLLIMFCLWKRKQKRAKASAISIAN 482

Query: 441 TRANELCKGNKAANSRTRDS---------WFPMFSLASVSAATANFSTENKLGEGGFGPV 491
           T+ N+    N+   S  R+            P+  + +V  AT NFS+ NKLG+GGFG V
Sbjct: 483 TQRNQNLPMNEMVLSSKREFSGEYKFEELELPLIEMETVVKATENFSSCNKLGQGGFGIV 542

Query: 492 YKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE 551
           YKGRLL+G+E+AVKRLS  S QG +EF NE+ LIA+LQH NLV++LGCCIE +EK+LIYE
Sbjct: 543 YKGRLLDGKEIAVKRLSKTSVQGTDEFMNEVTLIARLQHINLVQVLGCCIEGDEKMLIYE 602

Query: 552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLD 611
           Y+ N SLD +LF  T+ + L W  R  I  G+A+GLLYLHQ SR R+IHRDLK SNILLD
Sbjct: 603 YLENLSLDSYLFGKTRRSKLNWNERFDITNGVARGLLYLHQDSRFRIIHRDLKVSNILLD 662

Query: 612 KDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
           K+M PKISDFGMARIF  DE ++ T ++VGTYGYMSPEYA  G+FS KSDVFSFGV++LE
Sbjct: 663 KNMIPKISDFGMARIFERDETEANTMKVVGTYGYMSPEYAMYGIFSEKSDVFSFGVIVLE 722

Query: 672 TLSSKRNTDFSNTNSLT-LLGHAWDLWKDDRAWELIDPTLQNEASYLI-------LNRYI 723
            +S K+N  F N +    LL + W  WK+ RA E++DP + +  S          + + I
Sbjct: 723 IVSGKKNRGFYNLDYENDLLSYVWSRWKEGRALEIVDPVIVDSLSSQPSIFQPQEVLKCI 782

Query: 724 NVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPRQPAF 762
            +GLLCVQE A  RP M  VV M  ++   +P P+ P +
Sbjct: 783 QIGLLCVQELAEHRPAMSSVVWMFGSEATEIPQPKPPGY 821

Involved in sporophytic self-incompatibility system (the inability of flowering plants to achieve self-fertilization), probably acting in combination with S-locus-specific glycoproteins. Interaction with a ligand in the extracellular domain triggers the protein kinase activity of the cytoplasmic domain.

Brassica oleracea var. acephala (taxid: 3713)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SY89|Y1661_ARATH Putative G-type lectin S-receptor-like serine/threonine-protein kinase At1g61610 OS=Arabidopsis thaliana GN=At1g61610 PE=2 SV=1

 Score =  605 bits (1561), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 346/827 (41%), Positives = 470/827 (56%), Gaps = 67/827 (8%)

Query: 24  AADNITPSRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQI-PDTIVWVANRNSP 82
            +++ T +  IR+G+ L+S  + FELGFF+P  S  RY+GIWYK I P T+VWVANR  P
Sbjct: 28  TSNSFTRNHTIREGDSLISEDESFELGFFTPKNSTLRYVGIWYKNIEPQTVVWVANREKP 87

Query: 83  IFDSNAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSE 142
           + D    L I++ G LV++N  N TIWS+N+  E  N VA L  TG+LV+    S +   
Sbjct: 88  LLDHKGALKIADDGNLVIVNGQNETIWSTNVEPESNNTVAVLFKTGDLVL---CSDSDRR 144

Query: 143 DYLWQSFDHPSDTLLAGMKLGWDLKTGLERYQTSWKSDDDPSPGNYTHRLDIHVLPKLCT 202
            + W+SF++P+DT L GM++  +   G  R    WKS+ DPSPG Y+  +D     ++  
Sbjct: 145 KWYWESFNNPTDTFLPGMRVRVNPSLGENRAFIPWKSESDPSPGKYSMGIDPVGALEIVI 204

Query: 203 YNGSVKLLCSGPWNGAIFAAIP------SYSYLYK-PTVVDNEDEIYYRYDSYNSPVIMT 255
           + G  +   SGPWN AIF  IP      +Y Y +K  +  D +  +Y+ Y + +S   + 
Sbjct: 205 WEGEKRKWRSGPWNSAIFTGIPDMLRFTNYIYGFKLSSPPDRDGSVYFTYVASDSSDFLR 264

Query: 256 LKLNPSGKIQHLIWNERNRTWEAFFSLPDRFCQFYGHCGANSICSFDKK---PHCECLKG 312
             + P G  +   WN+  R W      P   C+ Y  CG  S+C   K+     C C+ G
Sbjct: 265 FWIRPDGVEEQFRWNKDIRNWNLLQWKPSTECEKYNRCGNYSVCDDSKEFDSGKCSCIDG 324

Query: 313 FELKSH---HNKTRPGTCVRSQSSDCKSG------DRFIMLDDVKLPDFVEASLNESMNV 363
           FE       +N+   G C R    +C         D F +L  +K+PDF    L+   N 
Sbjct: 325 FEPVHQDQWNNRDFSGGCQRRVPLNCNQSLVAGQEDGFTVLKGIKVPDFGSVVLHN--NS 382

Query: 364 KECEAECLKNCTCRAYANSKVTGEGSGCLMWFGDLIDIRKADDRNNGQSIYIRVPASELE 423
           + C+  C ++C+C+AYA       G GC++W  DLID+   +    G SI IR+  S+L 
Sbjct: 383 ETCKDVCARDCSCKAYA----LVVGIGCMIWTRDLIDMEHFE--RGGNSINIRLAGSKLG 436

Query: 424 TKKSQDMLQFDINMSIATRANELC--------KGNKAANSRTRDSW-------------- 461
             K    L   +   I      LC        K  KA   + +D                
Sbjct: 437 GGKENSTLWIIVFSVIGAFLLGLCIWILWKFKKSLKAFLWKKKDITVSDIIENRDYSSSP 496

Query: 462 -------------FPMFSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLS 508
                         P+FS  SV++AT +F+ ENKLG+GGFG VYKG    G+E+AVKRLS
Sbjct: 497 IKVLVGDQVDTPDLPIFSFDSVASATGDFAEENKLGQGGFGTVYKGNFSEGREIAVKRLS 556

Query: 509 SQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKE 568
            +S QG EEFKNEI LIAKLQHRNLVRLLGCCIE  EK+L+YEYMPNKSLD FLFD +K+
Sbjct: 557 GKSKQGLEEFKNEILLIAKLQHRNLVRLLGCCIEDNEKMLLYEYMPNKSLDRFLFDESKQ 616

Query: 569 NLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG 628
             L W  R  +I GIA+GLLYLH+ SRL++IHRDLKASNILLD +MNPKISDFGMARIF 
Sbjct: 617 GSLDWRKRWEVIGGIARGLLYLHRDSRLKIIHRDLKASNILLDTEMNPKISDFGMARIFN 676

Query: 629 GDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLT 688
             +  + T R+VGTYGYM+PEYA +G+FS KSDV+SFGVL+LE +S ++N  F  T+  +
Sbjct: 677 YRQDHANTIRVVGTYGYMAPEYAMEGIFSEKSDVYSFGVLILEIVSGRKNVSFRGTDHGS 736

Query: 689 LLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT 748
           L+G+AW LW   +  E+IDP +++        R I+VG+LC Q+    RP M  V+ ML 
Sbjct: 737 LIGYAWHLWSQGKTKEMIDPIVKDTRDVTEAMRCIHVGMLCTQDSVIHRPNMGSVLLMLE 796

Query: 749 NKTINLPHPRQPAFSSIRGLKNTILPANGKARVCSGNCLTLSEMDAR 795
           ++T  LP PRQP F S     +  L  +G   V S N +T + +  R
Sbjct: 797 SQTSQLPPPRQPTFHSFLNSGDIELNFDGHD-VASVNDVTFTTIVGR 842

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O81833|SD11_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1 OS=Arabidopsis thaliana GN=SD11 PE=1 SV=1

 Score =  603 bits (1556), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 345/781 (44%), Positives = 483/781 (61%), Gaps = 52/781 (6%)

Query: 28  ITPSRFIRDGEKLVSSSQRFELGFFS---PGKSKYRYLGIWYKQIPDTIVWVANRNSPIF 84
           ITP  F++DG+ L S  Q F+LGFFS     + ++R+LG+WY + P  +VWVANRN+P++
Sbjct: 28  ITPKEFLKDGDTLSSPDQVFQLGFFSLDQEEQPQHRFLGLWYME-PFAVVWVANRNNPLY 86

Query: 85  DSNAVLTISNGGKLVLLNQTNGTIWSSNLSREV-----KNPVAQLLDTGNLVVRDNFSSN 139
            ++  L +S+ G L L +  +  +WSS+ S         NP+ ++  +GNL+     SS+
Sbjct: 87  GTSGFLNLSSLGDLQLFDGEHKALWSSSSSSTKASKTANNPLLKISCSGNLI-----SSD 141

Query: 140 SSEDYLWQSFDHPSDTLLAGMKLGWDLKTGLERYQTSWKSDDDPSPGNYTHRLDIHVLPK 199
             E  LWQSFD+P +T+LAGMKLG + KT +E   +SWK+  DPSPG++T  LD   LP+
Sbjct: 142 GEEAVLWQSFDYPMNTILAGMKLGKNFKTQMEWSLSSWKTLKDPSPGDFTLSLDTRGLPQ 201

Query: 200 LCTY-NG----SVKLLCSGPWNGAIFAAIPSY---SYLYKPTVVDNEDEIYYRYDSYNSP 251
           L    NG    S +L   G WNG  F   P+    + L+      +  E+ Y +   +  
Sbjct: 202 LILRKNGDSSYSYRL---GSWNGLSFTGAPAMGRENSLFDYKFTSSAQEVNYSWTPRHR- 257

Query: 252 VIMTLKLNPSGKIQHLIWNERNRTWEAFFSLPDRFCQFYGHCGANSICSFDKK--PHCEC 309
           ++  L LN +GK+   I +++N+ W    + P+  C +Y  CGA ++C  + K  P C C
Sbjct: 258 IVSRLVLNNTGKLHRFIQSKQNQ-WILANTAPEDECDYYSICGAYAVCGINSKNTPSCSC 316

Query: 310 LKGFELKSHH--NKTRPG-TCVRSQSSDCKSGDRFIMLDDVKLPD--FVEASLNESMNVK 364
           L+GF+ KS    N +R    CV    ++C+  D F+    +KLPD  +        M ++
Sbjct: 317 LQGFKPKSGRKWNISRGAYGCVHEIPTNCEKKDAFVKFPGLKLPDTSWSWYDAKNEMTLE 376

Query: 365 ECEAECLKNCTCRAYANSKVTGEGSGCLMWFGDLIDIRKADDRNNGQSIYIRVPASELET 424
           +C+ +C  NC+C AYAN+ +   G GCL+WFGDL+D+R+    + GQ +YIR+  +++E 
Sbjct: 377 DCKIKCSSNCSCTAYANTDIREGGKGCLLWFGDLVDMREYS--SFGQDVYIRMGFAKIEF 434

Query: 425 KKSQDMLQFDINMSIATRA---------NELCKGNKAANSRT----RDSWFPMFSLASVS 471
           K  + +     ++                ++ K  +  N R      D   P+F   ++S
Sbjct: 435 KGREVVGMVVGSVVAIAVVLVVVFACFRKKIMKRYRGENFRKGIEEEDLDLPIFDRKTIS 494

Query: 472 AATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHR 531
            AT +FS  N LG GGFGPVYKG+L +GQE+AVKRLS+ SGQG EEFKNE+KLIAKLQHR
Sbjct: 495 IATDDFSYVNFLGRGGFGPVYKGKLEDGQEIAVKRLSANSGQGVEEFKNEVKLIAKLQHR 554

Query: 532 NLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH 591
           NLVRLLGCCI+ EE +LIYEYMPNKSLDFF+FD  +   L W  R+ II G+A+G+LYLH
Sbjct: 555 NLVRLLGCCIQGEECMLIYEYMPNKSLDFFIFDERRSTELDWKKRMNIINGVARGILYLH 614

Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYA 651
           Q SRLR+IHRDLKA N+LLD DMNPKISDFG+A+ FGGD+ +S T R+VGTYGYM PEYA
Sbjct: 615 QDSRLRIIHRDLKAGNVLLDNDMNPKISDFGLAKSFGGDQSESSTNRVVGTYGYMPPEYA 674

Query: 652 QQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTN-SLTLLGHAWDLWKDDRAWELIDPTL 710
             G FS+KSDVFSFGVL+LE ++ K N  F + +  L LLGH W +W +DR  E+ +   
Sbjct: 675 IDGHFSVKSDVFSFGVLVLEIITGKTNRGFRHADHDLNLLGHVWKMWVEDREIEVPEEEW 734

Query: 711 QNEASYLI-LNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPRQPAFSSIRGLK 769
             E S +  + R I+V LLCVQ+   DRPTM  VV M  + + +LPHP QP F + R + 
Sbjct: 735 LEETSVIPEVLRCIHVALLCVQQKPEDRPTMASVVLMFGSDS-SLPHPTQPGFFTNRNVP 793

Query: 770 N 770
           +
Sbjct: 794 D 794

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	795
224115098	802	predicted protein [Populus trichocarpa]	0.963	0.955	0.546	0.0
359493711	1081	PREDICTED: G-type lectin S-receptor-like	0.964	0.709	0.518	0.0
224122858	831	predicted protein [Populus trichocarpa]	0.974	0.932	0.500	0.0
359493721	804	PREDICTED: G-type lectin S-receptor-like	0.954	0.944	0.5	0.0
224115102	784	predicted protein [Populus trichocarpa]	0.924	0.937	0.503	0.0
357446263	839	Serine/threonine protein kinase [Medicag	0.958	0.908	0.489	0.0
359493727	1767	PREDICTED: uncharacterized protein LOC10	0.922	0.414	0.505	0.0
147799241	818	hypothetical protein VITISV_027305 [Viti	0.978	0.951	0.488	0.0
359493730	770	PREDICTED: G-type lectin S-receptor-like	0.959	0.990	0.491	0.0
302143157	818	unnamed protein product [Vitis vinifera]	0.959	0.932	0.485	0.0

>gi|224115098|ref|XP_002316939.1| predicted protein [Populus trichocarpa] gi|222860004|gb|EEE97551.1| predicted protein [Populus trichocarpa]

 Score =  818 bits (2112), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/777 (54%), Positives = 534/777 (68%), Gaps = 11/777 (1%)

Query: 1   MENLHLLYNFISCVFILSIK-LSIAADNITPSRFIRDGEKLVSSSQRFELGFFSPGKSKY 59
           ME+L   + F S +FI S+  LS +AD ITP   ++DG+ L+S SQ FELGFFSPG SKY
Sbjct: 1   MESLPF-FIFFSTLFIQSLHFLSFSADIITPDLPVKDGQTLISVSQSFELGFFSPGTSKY 59

Query: 60  RYLGIWYKQIPDTIVWVANRNSPIFDSNAVLTISNGGKLVLLNQTNGTIWSSNLSREVKN 119
           RY+GIWYK+ P+T+VWVANRN+P+ D   VLTI N G LVLL+Q    IWSSN S  +  
Sbjct: 60  RYVGIWYKKSPETVVWVANRNNPLTDHFGVLTIDNRGNLVLLDQIKNIIWSSNSSSIIAG 119

Query: 120 PVAQLLDTGNLVVRDNFSSNSSEDYLWQSFDHPSDTLLAGMKLGWDLKTGLERYQTSWKS 179
           PVAQLLD+GNLVVRDN SS ++E Y WQSFD PSDTLL GMKLGW+LKTG ERY  +W+S
Sbjct: 120 PVAQLLDSGNLVVRDNGSSRNTESYRWQSFDQPSDTLLPGMKLGWNLKTGQERYLITWRS 179

Query: 180 DDDPSPGNYTHRLDIHVLPKLCTYNGSVKLLCSGPWNGAIFAAIPS-YSYLYKPTVVDNE 238
             DPSPG++T+RLDIH LP+L    GSVK + SGPWNG  F   P  ++ +++P +V NE
Sbjct: 180 ISDPSPGDFTYRLDIHGLPQLFIVVGSVKKVRSGPWNGIFFGGTPKVHNSVFEPILVRNE 239

Query: 239 DEIYYRYDSYNSPVIMTLKLNPSGKIQHLIWNERNRTWEAFFSLPDRFCQFYGHCGANSI 298
           DEIYY Y   N+ V   L LN SG ++ L+   +N  W   +S+P   C+ YG CGAN I
Sbjct: 240 DEIYYTYRLLNNSVCSRLTLNQSGAVERLVMYGQNSGWTTIYSVPVDTCENYGQCGANGI 299

Query: 299 CSFDKKPHCECLKGF-----ELKSHHNKTRPGTCVRSQSSDCKSGDRFIMLDDVKLPDFV 353
           C     P CECLKGF     E     N      C    + DC+SG+ F+ L  VKLPD +
Sbjct: 300 CRTRTSPICECLKGFKSIPEEELDIQNFYGSRKCETRLTLDCQSGEGFLKLPGVKLPDLL 359

Query: 354 EASLNESMNVKECEAECLKNCTCRAYANSKVTG--EGSGCLMWFGDLIDIRKADDRNNGQ 411
           E  LNESMN+KECEAEC KNC+C A+A + ++G  +GSGCLMWFG+LIDIR+      GQ
Sbjct: 360 EFRLNESMNLKECEAECFKNCSCSAFATTNLSGGGDGSGCLMWFGNLIDIREQSGSTIGQ 419

Query: 412 SIYIRVPASELETKKSQDMLQFDINMSIATRANELCKGNKAANSRTRDSWFPMFSLASVS 471
            I+IRVPASELE  +S    +      +A+ +  L       + R      P+F L +++
Sbjct: 420 DIHIRVPASELEMARSSKRKKMLKTALVASMSALLGIFVSGMDRRKEGMEAPLFDLDTIA 479

Query: 472 AATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHR 531
            AT NF+ ++ +G GGFG VYKG+LL GQE+AVK+LS  SGQG EEF+NE+ LIAKLQHR
Sbjct: 480 TATNNFAPDSIIGAGGFGSVYKGKLLTGQEIAVKKLSMNSGQGVEEFRNEVVLIAKLQHR 539

Query: 532 NLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH 591
           NLV LLG CI  EE++LIYEYMPNKSLD+F+FD  +  LLGW  R  II GIA+GLLYLH
Sbjct: 540 NLVGLLGSCIHREERMLIYEYMPNKSLDYFIFDHERSALLGWKERFVIILGIARGLLYLH 599

Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYA 651
           Q S+L+++HRDLK SN+LLD ++ PKISDFG+ARI G D  ++KT+R++GTYGYM+PEYA
Sbjct: 600 QDSKLQIVHRDLKPSNVLLDSNLIPKISDFGLARISGDDGKETKTRRVIGTYGYMAPEYA 659

Query: 652 QQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTN-SLTLLGHAWDLWKDDRAWELIDPTL 710
             G FS+KSDVFS GVLLLE +S K+N  F + +    LLGHAW +W + RA ELID  L
Sbjct: 660 IDGKFSVKSDVFSLGVLLLEIISGKKNRGFVHPDHHHHLLGHAWLMWNEGRASELIDTGL 719

Query: 711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPRQPAFSSIRG 767
           ++ +    L R I VGLLCVQ+   DRP M  VV ML N+   LP P+QP F   RG
Sbjct: 720 EDTSGKSQLLRCIQVGLLCVQKLPEDRPVMSTVVFMLANEGAVLPQPKQPGFFIERG 776

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359493711|ref|XP_002281022.2| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Vitis vinifera]

 Score =  780 bits (2014), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/790 (51%), Positives = 518/790 (65%), Gaps = 23/790 (2%)

Query: 25   ADNITPSRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPDTIVWVANRNSPIF 84
            AD+I   + I D E LVSS Q FELGFFSPG SK RYLGIWYK  P T VWVANRN+PI 
Sbjct: 296  ADSIRMDQSISDSETLVSSGQSFELGFFSPGSSKNRYLGIWYKNTPQTAVWVANRNNPIA 355

Query: 85   DSNAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDY 144
            DS  VLTI N G LVLLNQ+   IWS NLSR  +NPVAQLL+TGNLV+RD  S+ +S+ Y
Sbjct: 356  DSYGVLTIINNGALVLLNQSKSVIWSPNLSRVPENPVAQLLETGNLVLRDG-SNETSKSY 414

Query: 145  LWQSFDHPSDTLLAGMKLGWDLKTGLERYQTSWKSDDDPSPGNYTHRLDIHVLPKLCTYN 204
            +WQSFD PSDT+L GMK+GW+LKTGL+R  TSWKS DDPS G++++  DI+VLP L    
Sbjct: 415  IWQSFDDPSDTMLPGMKVGWNLKTGLQRKLTSWKSSDDPSLGDFSYGFDINVLPYLVLGV 474

Query: 205  GSVKLLCSGPWNGAIFAAIPSY-SYLYKPTVVDNEDEIYYRYDSYNSPVIMTLKLNPSGK 263
            GS K++ SGPWNG  F  +    + +YK   V N DE+Y  Y+S N+ +I  L LN SG 
Sbjct: 475  GSSKIVRSGPWNGLEFNGVYVLDNSVYKAVFVANNDEVYALYESNNNKIISRLTLNHSGF 534

Query: 264  IQHLIWNERNRTWEAFFSLPDRFCQFYGHCGANSICSFDKKPHCECLKGFELKSHHN--- 320
            +Q L+  + +  W+  +S+P   C+ YGHCGAN IC   K   CECL GF  KS      
Sbjct: 535  LQRLLLKKGSSVWDELYSIPSELCENYGHCGANGICRIGKLQICECLTGFTPKSQEEWDM 594

Query: 321  -KTRPGTCVRSQSSDCKSGDRFIMLDDVKLPDFVEASLNESMNVKECEAECLKNCTCRAY 379
              T  G C R    DC+  + F+ +  VKLPD ++  +   ++++EC+  CL NC+C AY
Sbjct: 595  FNTSSG-CTRRMPLDCQIEEGFVKVTGVKLPDLIDFHVIMGVSLRECKVSCLNNCSCTAY 653

Query: 380  ANSKVTGEGSGCLMWFGDLIDIRKADDRNNGQSIYIRVPASELETKKSQDMLQFDINMSI 439
            A +   G G GCLMW GDLIDIR+     + + IYIR+  SEL    +Q   +  I + I
Sbjct: 654  AYTNPNGSG-GCLMWSGDLIDIRELTSEKHAEDIYIRMHTSELGLNTNQKKKKLVIILVI 712

Query: 440  ATRANELCKG-------------NKAANSRTRDSWFPMFSLASVSAATANFSTENKLGEG 486
            +T +  L  G                  S+  +   P+F L +++ AT NFS  NK+G G
Sbjct: 713  STFSGILTLGLSFWFRFWKKRTMGTDQESKKENLELPLFDLPTIATATNNFSNTNKIGAG 772

Query: 487  GFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEK 546
            GFG VYKG L  G  VAVKRLS  S QG +EFKNE  LIAKLQH+NLVRLLGCCI+ EE+
Sbjct: 773  GFGSVYKGNLPEGVAVAVKRLSKNSAQGVQEFKNEAVLIAKLQHKNLVRLLGCCIQGEER 832

Query: 547  ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKAS 606
            IL+YEYMPNKSLD+F+FD  +  LL W  R  I+ GIA+GLLYLHQ SR ++IHRDLK S
Sbjct: 833  ILLYEYMPNKSLDYFIFDQNRRALLAWDKRCEIVMGIARGLLYLHQDSRFQIIHRDLKTS 892

Query: 607  NILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFG 666
            NILLD ++NPKISDFG+ARIFG +E++++TKRIVGTYGYMSPEY   G FSIK DVFSFG
Sbjct: 893  NILLDDNLNPKISDFGLARIFGENEMETRTKRIVGTYGYMSPEYVIDGHFSIKLDVFSFG 952

Query: 667  VLLLETLSSKRNTDFSNTN-SLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINV 725
            VLLLE +S ++N  FS+ +    LLGHAW LW+ +RA EL+D  L++      + R I V
Sbjct: 953  VLLLEIVSGEKNRGFSHPDHHHNLLGHAWLLWEQNRALELMDACLEDSCVASQVLRCIQV 1012

Query: 726  GLLCVQEDAADRPTMFEVVSMLTNKTINLPHPRQPAFSSIRGLKNTILPANGKARVCSGN 785
            GLLCVQ   ADRP M  V+ ML N+   LP P+ P F + R   +T    +GK  + S N
Sbjct: 1013 GLLCVQNLPADRPAMSSVIFMLGNEGATLPQPKHPGFFTERSSVDTD-TMSGKIELHSEN 1071

Query: 786  CLTLSEMDAR 795
             +T+S +  R
Sbjct: 1072 AVTISMLKGR 1081

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224122858|ref|XP_002330381.1| predicted protein [Populus trichocarpa] gi|222871766|gb|EEF08897.1| predicted protein [Populus trichocarpa]

 Score =  760 bits (1963), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/827 (50%), Positives = 534/827 (64%), Gaps = 52/827 (6%)

Query: 10  FISCVFILSIKLSIAADNITPSRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQI 69
            +S VF LSI  S A ++I  ++ + DG+ LVSS   FELGFFSPG S+ RY+GIWYK+I
Sbjct: 16  LLSIVFFLSIP-STAIESINATQSLEDGDTLVSSEGHFELGFFSPGNSRNRYMGIWYKKI 74

Query: 70  PD-TIVWVANRNSPIFDSNAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTG 128
              T+VWVANRN+P+ DS+ +L   + G L  +N TNGTIWSSN+SR   NPVAQLLDTG
Sbjct: 75  SSFTVVWVANRNTPLNDSSGMLKFVDHGNLAFINSTNGTIWSSNISRAAINPVAQLLDTG 134

Query: 129 NLVVRDNFSSNSSEDYLWQSFDHPSDTLLAGMKLGWDLKTGLERYQTSWKSDDDPSPGNY 188
           NLVVR   + N  E++LWQSFD+P D+ L GMK G    TGL RY TSWKS  DPS G Y
Sbjct: 135 NLVVRAE-NDNDPENFLWQSFDYPGDSFLPGMKYGISFVTGLNRYLTSWKSPSDPSTGKY 193

Query: 189 THRLDIHVLPKLCTYNGSVKLLCSGPWNGAIFAAI------PSYSYLYKPTVVDNEDEIY 242
           T++LD + LP+     GSV    SGPWNG  F+ +      P Y++ +    V N++EIY
Sbjct: 194 TNKLDPNGLPQYFLSQGSVDQFRSGPWNGLRFSGMINLKPNPIYTFEF----VFNQEEIY 249

Query: 243 YRYDSYNSPVIMTLKLNPSGKIQHLIWNERNRTWEAFFSLPDRFCQFYGHCGANSICSFD 302
           Y+Y   NS V+  + L+P G +Q   W +R + W  + +     C  +  CGA+ +C+ +
Sbjct: 250 YKYQIANSSVLSRMVLSPDGVLQRFTWIDRTQDWTLYLTANMDNCDRFALCGAHGVCNIN 309

Query: 303 KKPHCECLKGFELKSHHNKTRPG---TCVRSQSSDCKSGDRFIMLDDVKLPDFVEASLNE 359
             P C+CLK FE KS    T       CVR    DC +G+ FI    +K+PD  ++  N+
Sbjct: 310 NSPACDCLKEFEPKSLEEWTAADWSQGCVRKAPLDCSNGEGFIKYTGIKVPDTRKSWYNK 369

Query: 360 SMNVKECEAECLKNCTCRAYANSKVTGEGSGCLMWFGDLIDIRKADDRNNGQSIYIRVPA 419
           ++N++ECE  CLKNC+C AYAN  V   GSGC++WFGDLIDIR+ ++  NGQ IYIR+ A
Sbjct: 370 TINLEECEEVCLKNCSCTAYANLDVRDGGSGCVLWFGDLIDIRQYNE--NGQDIYIRIAA 427

Query: 420 SELET------KKSQDMLQFDINMSIATRANELC----------------KGNKAAN--- 454
           S ++       KK   ++   +++ +A     LC                +GN   N   
Sbjct: 428 SVIDKPVKSRGKKRVRIIVIPVSL-VAFSLLALCLFLRFLRKNKQQQLTREGNVVTNPEQ 486

Query: 455 -----SRTRDSWFPMFSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSS 509
                SR  D   P+F LA+++ AT  FS  NKLG+GGFGPVYKG L +GQE+AVKRLS 
Sbjct: 487 DRTKESRNEDLELPLFDLATLTDATNCFSINNKLGQGGFGPVYKGILQDGQEIAVKRLSK 546

Query: 510 QSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKEN 569
           +S QG  EF+NE+  IAKLQHRNLV+LLGCCIELEE++LIYEYMPNKSLD F+FD  +  
Sbjct: 547 RSRQGINEFRNEVVCIAKLQHRNLVKLLGCCIELEERMLIYEYMPNKSLDSFIFDKRRNM 606

Query: 570 LLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG 629
           LL W  R  II GIA+GLLYLHQ SRLR+IHRDLKASNILLD +MNPKISDFGMAR FGG
Sbjct: 607 LLDWTKRFPIINGIARGLLYLHQDSRLRIIHRDLKASNILLDYEMNPKISDFGMARSFGG 666

Query: 630 DELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNT-NSLT 688
           DE  + T RIVGTYGYMSPEYA  GLFS+KSDVFSFGVL+LE +S ++N  F +  + L 
Sbjct: 667 DETSANTSRIVGTYGYMSPEYAIDGLFSVKSDVFSFGVLVLEIVSGRKNRGFRHAEHKLN 726

Query: 689 LLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT 748
           LLGHAW L K+ R  +LID ++ +      + R I V LLCVQ+   DRP M  VV ML+
Sbjct: 727 LLGHAWMLHKEGRPLDLIDESIVDTCIISEVLRSIEVALLCVQKSPEDRPKMSIVVLMLS 786

Query: 749 NKTINLPHPRQPAFSSIRGLKNTILPANGKARVCSGNCLTLSEMDAR 795
           +  + LP P++P F + R L N    +  K  + S N LT + ++AR
Sbjct: 787 SDIV-LPQPKEPGFFTERDLSNDS-SSTIKHEISSVNELTSTLLEAR 831

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359493721|ref|XP_002280717.2| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Vitis vinifera]

 Score =  746 bits (1925), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/804 (50%), Positives = 526/804 (65%), Gaps = 45/804 (5%)

Query: 7   LYNFISCVFILS-----IKLSIAADNITPSRFIRDGEKLVSSSQRFELGFFSPGKSKYRY 61
           L N    VF+ S     +++S A D+IT ++ I+DGE ++S+   FELGF   G SK +Y
Sbjct: 31  LGNLGKLVFLFSYVISILRISTAVDSITANQHIKDGETIISAGGNFELGFVHLGTSKNQY 90

Query: 62  LGIWYKQI-PDTIVWVANRNSPIFDSNAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNP 120
           LGIWYK++ P T+VWVANR  P+ DS+ VL +++ G LV+LN +NG IWSSN SR  +NP
Sbjct: 91  LGIWYKKVTPRTVVWVANRELPVTDSSGVLKVTDQGSLVILNGSNGLIWSSNSSRSARNP 150

Query: 121 VAQLLDTGNLVVRDNFSSNSSEDYLWQSFDHPSDTLLAGMKLGWDLKTGLERYQTSWKSD 180
            AQLLD+GNLV++    S+  +++LWQSFD+P DTLL GMK G +  TGL+RY +SWKS+
Sbjct: 151 TAQLLDSGNLVIKSGNDSDP-DNFLWQSFDYPGDTLLPGMKHGRNTVTGLDRYLSSWKSN 209

Query: 181 DDPSPGNYTHRLDIHVLPKLCTYNGSVKLLCSGPWNGAIFAAIPSY--SYLYKPTVVDNE 238
           DDPS G++T+ LD    P+L   +GS  +  SGPWNG  F   P    + ++  + V NE
Sbjct: 210 DDPSKGDFTYGLDPSGCPQLFLRSGSTVIFRSGPWNGIRFNGFPELRPNPVFNYSFVFNE 269

Query: 239 DEIYYRYDSYNSPVIMTLKLNPSGKIQHLIWNERNRTWEAFFSLPDRFCQFYGHCGANSI 298
            E+Y+ Y   NS V+  L LNP+G +Q LIW  R ++W  + +     C  Y  CGA S 
Sbjct: 270 KEMYFTYKLVNSSVLSRLVLNPNGNVQRLIWIGRTKSWNVYSTAYKDDCDSYALCGAYST 329

Query: 299 CSFDKKPHCECLKGFELKSHHN---KTRPGTCVRSQSSDCKSGDRFIMLDDVKLPDFVEA 355
           C+  + P C C+KGF  K  +          CVR  S DC+ GD F+    VKLPD   +
Sbjct: 330 CNIHRSPRCGCMKGFVPKFPYQWDTMDWSNGCVRKTSLDCQKGDGFVKCSGVKLPDTRNS 389

Query: 356 SLNESMNVKECEAECLKNCTCRAYANSKVTGEGSGCLMWFGDLIDIRKADDRNNGQSIYI 415
             NESMN+KEC + CL+NC+C AY NS + G GSGCL+WFGDLID+++  +  NGQ  YI
Sbjct: 390 WFNESMNLKECASLCLRNCSCSAYTNSDIKGGGSGCLLWFGDLIDVKEFTE--NGQDFYI 447

Query: 416 RVPASELETKKSQDMLQFDINMSIATRANELCKGNKAANSRTRDSWFPMFSLASVSAATA 475
           R+ ASELE                      L       N R  D   P+F L ++  AT 
Sbjct: 448 RMAASELE----------------------LNNEGAETNERQEDLELPLFDLDTILNATH 485

Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR 535
           NFS  NKLGEGGFGPVYKG L +G+E+AVKRLS +S QG +EFKNE+  I+KLQHRNLV+
Sbjct: 486 NFSRNNKLGEGGFGPVYKGMLQDGKEIAVKRLSKESNQGLDEFKNEVIYISKLQHRNLVK 545

Query: 536 LLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSR 595
           LLGCCI  EEK+LIYEYMPNKSL+FF+FD  +  +L W  R  II GIA+GLLYLHQ SR
Sbjct: 546 LLGCCIHGEEKMLIYEYMPNKSLNFFIFDGIQSMVLDWPKRFVIINGIARGLLYLHQDSR 605

Query: 596 LRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGL 655
           LR+IHRDLKA N+LLD +MNP+ISDFGMAR FGG+E Q++TKR+VGTYGYMSPEYA  G+
Sbjct: 606 LRIIHRDLKADNVLLDNEMNPRISDFGMARSFGGNETQARTKRVVGTYGYMSPEYAIDGV 665

Query: 656 FSIKSDVFSFGVLLLETLSSKRNTDFSNTN-SLTLLGHAWDLWKDDRAWELIDPTLQNEA 714
           +S+KSDVFSFGVLLLE +S KRN  F++ +  L LLGHAW L+ +    ELID ++ +  
Sbjct: 666 YSVKSDVFSFGVLLLEIISGKRNRGFNHPDHDLNLLGHAWTLYMERTPLELIDASVGDTY 725

Query: 715 SYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPRQPAFSSIRGLKNTILP 774
           +   + R +NVGLLCVQ    DRP M  VV ML+++   L  P++P F + R     +L 
Sbjct: 726 NQSEVLRALNVGLLCVQRHPDDRPNMSSVVLMLSSEGA-LRQPKEPGFFTER----NMLE 780

Query: 775 ANG---KARVCSGNCLTLSEMDAR 795
           A+    K  V SGN  T++ ++ R
Sbjct: 781 ADSLQCKHAVFSGNEHTITILEGR 804

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224115102|ref|XP_002316940.1| predicted protein [Populus trichocarpa] gi|222860005|gb|EEE97552.1| predicted protein [Populus trichocarpa]

 Score =  746 bits (1925), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/773 (50%), Positives = 513/773 (66%), Gaps = 38/773 (4%)

Query: 10  FISCVFILSIKLSIAADNITPSRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQI 69
           F+    + +I++S A D I+P +FI DG+ +VS+ Q FELGFFSPG S  RYLGIWYK+ 
Sbjct: 16  FVYSFLLSTIRVSNAPDIISPGQFIGDGDTIVSAGQNFELGFFSPGSSTRRYLGIWYKKF 75

Query: 70  P-DTIVWVANRNSPIFDSNAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTG 128
              T+VWVANR +PIFD + VL  +N G L+LLN T   +WSSN +    NPVAQLL++G
Sbjct: 76  STGTVVWVANRENPIFDHSGVLYFTNQGTLLLLNGTKDVVWSSNRTTPKNNPVAQLLESG 135

Query: 129 NLVVRDNFSSNSSEDYLWQSFDHPSDTLLAGMKLGWDLKTGLERYQTSWKSDDDPSPGNY 188
           NLVV+D   SN  E +LWQSFD+P DT L  MKLG +L TGL+   +SWKS DDP+ G Y
Sbjct: 136 NLVVKDGNDSNP-ESFLWQSFDYPGDTNLPDMKLGRNLVTGLDWSISSWKSLDDPARGEY 194

Query: 189 THRLDIHVLPKLCTYNGSVKLLCSGPWNGAIFAAI------PSYSYLYKPTVVDNEDEIY 242
           +  +D     +L    G      +G WNG  F         P Y Y +    V N+ E+Y
Sbjct: 195 SLGIDPRGYQQLVYKKGRAIQFRAGSWNGIRFTGATRLRPNPVYRYEF----VLNDKEVY 250

Query: 243 YRYDSYNSPVIMTLKLNPSGKIQHLIWNERNRTWEAFFSLPDRFCQFYGHCGANSICSFD 302
           + ++  NS V     +N SG ++ L W  +   W  +F++ +  C  Y  CG+N+ C+ D
Sbjct: 251 FNFELLNSSVASRFVVNASGVVERLTWISQMHRWTRYFAVGEDQCDAYSFCGSNAKCNID 310

Query: 303 KKPHCECLKGFELKSHHN---KTRPGTCVRSQSSDCKSGDRFIMLDDVKLPDFVEASLNE 359
           K P C CL GFE KS  +   +   G CVR  +  C  G+ F+    +KLPD   +  N 
Sbjct: 311 KSPVCACLDGFEPKSARDWSFQDWSGGCVRRTTLTCNRGEGFVKHTGMKLPDTSSSWYNT 370

Query: 360 SMNVKECEAECLKNCTCRAYANSKVTGEGSGCLMWFGDLIDIRKADDRNNGQSIYIRVPA 419
           S+++KEC+  CLK C+C AYAN+ V G GSGCL+WFGDLID+R+    N GQ +YIR+ A
Sbjct: 371 SISLKECQELCLKKCSCMAYANTDVRGGGSGCLLWFGDLIDMREF--VNTGQDLYIRMAA 428

Query: 420 SELETKKSQDMLQFDINMSIATRANELCKGNKAANSRTRDSWFPMFSLASVSAATANFST 479
           S L   K +++L+ D +                ++SR  +   P+  L++++ AT NFS+
Sbjct: 429 SYL--GKMKNILEMDYD----------------SHSRKEELELPIIDLSTIAKATGNFSS 470

Query: 480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGC 539
             KLGEGGFG VYKG L  GQ++AVKRLS  SGQG EEFKNE+ LIAKLQHRNLV+LLGC
Sbjct: 471 NKKLGEGGFGLVYKGTLY-GQDIAVKRLSMYSGQGIEEFKNEVLLIAKLQHRNLVKLLGC 529

Query: 540 CIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
           CIE +E++LIYEYMPNKSLD+F+FD ++  LL W TR+ II+GIA+GLLYLHQ SRLR+I
Sbjct: 530 CIEGDERMLIYEYMPNKSLDYFIFDQSRSKLLDWPTRISIIDGIARGLLYLHQDSRLRII 589

Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRDLKASN+LLD DMNPKISDFGMARIFGG++ ++ TKR+VGTYGYM+PEYA +GLFS+K
Sbjct: 590 HRDLKASNVLLDTDMNPKISDFGMARIFGGNQTEANTKRVVGTYGYMAPEYAVEGLFSVK 649

Query: 660 SDVFSFGVLLLETLSSKRNTD-FSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLI 718
           SD+FSFGVL+LE +S ++N   FS+ + L L+GHAW LW ++R+ EL D TL    +   
Sbjct: 650 SDIFSFGVLVLEIVSGRKNRGFFSHNHHLNLVGHAWKLWMEERSLELTDNTLGASHALSE 709

Query: 719 LNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPRQPAFSSIRGLKNT 771
           + RYI+VGLLCVQ+   DRP M   V ML  ++ +LP P+QP F   R +  T
Sbjct: 710 IIRYIHVGLLCVQQQPDDRPNMSTAVLMLGGES-SLPQPKQPGFFLERNVPRT 761

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357446263|ref|XP_003593409.1| Serine/threonine protein kinase [Medicago truncatula] gi|355482457|gb|AES63660.1| Serine/threonine protein kinase [Medicago truncatula]

 Score =  745 bits (1924), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/797 (48%), Positives = 515/797 (64%), Gaps = 35/797 (4%)

Query: 1   MENLHLLYNFISCVFILSIKLSI---AADNITPSRFIRDGEKLVSSSQRFELGFFSPGKS 57
           ME    ++  ++  F L+    I   A D ITP +FI   + L+S SQ FELGFF+P  S
Sbjct: 1   MEKTEFIFLLLATCFHLTTLFPIPSKAEDTITPPQFITGNQTLISPSQNFELGFFTPKNS 60

Query: 58  KYRYLGIWYKQIP-DTIVWVANRNSPIFDSNAVLTISNGGKLVLLNQTNGTIWSSNLSRE 116
            Y YLGIWYKQI    IVWVANR+ P+ D N  LT +N GKL++LN     +W+SN S  
Sbjct: 61  TYTYLGIWYKQIHIKNIVWVANRDKPLLDHNGTLTFNNDGKLIILNYGGSVLWASNSSGP 120

Query: 117 VKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQSFDHPSDTLLAGMKLGWDLKTGLERYQTS 176
            K PVAQLLDTGN V++ NF   +SE+ LWQSFD+PS+TLL GMKLG + KTGL  + TS
Sbjct: 121 AKTPVAQLLDTGNFVLK-NFEDENSEEILWQSFDYPSNTLLPGMKLGRNFKTGLNIHLTS 179

Query: 177 WKSDDDPSPGNYTHRLDIHVLPKLCTYNGSVKLLCSGPWNGAIFAAIPSY--SYLYKPTV 234
           WK+ D+PS G Y++ +D   LP+L    G  K+  SGPW    +   P    + ++KP  
Sbjct: 180 WKNIDNPSSGEYSYSVDPRGLPQLFLQKGKKKIFRSGPWYVEQYKGDPVLRENPIFKPVF 239

Query: 235 VDNEDEIYYRYDSYNSPVIMTLKLNPSGKIQHLIWNERNRTWEAFFSLPDRFCQFYGHCG 294
           V + DE+YY +++ +  ++    L+ SG IQH  WN+    W + F++    C  YG CG
Sbjct: 240 VFDSDEVYYSFETKDD-IVSRFVLSESGLIQHFTWNDHRSNWFSEFNVQGDRCDDYGICG 298

Query: 295 ANSICSFDKKPHCECLKGFELKSHHNKTR---PGTCVRSQSSDCKSGDRFIMLDDVKLPD 351
           A   C+    P C+CL GFE ++ H+         CVR  S  C++GD F     +KLPD
Sbjct: 299 AYGTCNIKNSPICKCLNGFEPRNMHDWKMLDWSSGCVRENSKVCRNGDVFKKFIGMKLPD 358

Query: 352 FVEASLNESMNVKECEAECLKNCTCRAYANSKVTGEGSGCLMWFGDLIDIRKADDRNNGQ 411
            VE  +N S+N+ +CE EC KNC+C AYA   +   G+GC+ WFGDL DIR  +D  N Q
Sbjct: 359 SVEFHVNYSINIDQCEVECSKNCSCVAYAKLDINASGNGCIAWFGDLFDIR--EDSVNEQ 416

Query: 412 SIYIRVPASEL----ETKKSQDMLQFDINMSIAT--------------RANELCKGNKAA 453
             ++RV ASEL    E  K + ++   +++S+A+              R N   +     
Sbjct: 417 DFFVRVSASELDSNVERNKRKKLILLFVSISVASTIITSALWLIIKKWRRNRAKETGIRL 476

Query: 454 NSRTRDSWF--PMFSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQS 511
           +  T  S F  P F +A + AAT NFS  NK+GEGGFGPVYKG+L +GQE+AVKRLS  S
Sbjct: 477 SVDTSKSEFELPFFEIAIIEAATRNFSFYNKIGEGGFGPVYKGQLPSGQEIAVKRLSENS 536

Query: 512 GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLL 571
           GQG +EFKNE+  I++LQHRNLV+LLGCCI+ E+K+L+YEYMPN+SLD  LFD TK + L
Sbjct: 537 GQGLQEFKNEVIFISQLQHRNLVKLLGCCIQGEDKMLVYEYMPNRSLDSLLFDETKRSAL 596

Query: 572 GWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE 631
            W  R+ II+GIA+GL+YLH+ SRLR+IHRDLKASN+LLD +MNPKISDFGMAR+FGGD+
Sbjct: 597 SWQKRLDIIDGIARGLVYLHRDSRLRIIHRDLKASNVLLDGEMNPKISDFGMARMFGGDQ 656

Query: 632 LQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTN-SLTLL 690
            + KTKR+VGTYGYM PEYA  G FS KSDV+SFGVLLLE LS K+N  F + +  L LL
Sbjct: 657 TEEKTKRVVGTYGYMPPEYAMDGHFSFKSDVYSFGVLLLELLSGKKNRGFFHPDHKLNLL 716

Query: 691 GHAWDLWKDDRAWELIDPTLQNEASYL-ILNRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
           GHAW LW + +  EL+DP L+++ S    + + I +GLLCVQ+   +RPTM  VV ML  
Sbjct: 717 GHAWKLWNEGKVIELMDPLLEDQVSTPESILKCIQIGLLCVQQHPEERPTMSSVVLMLDG 776

Query: 750 KTINLPHPRQPAFSSIR 766
           +++ LP PR+P   S R
Sbjct: 777 ESVLLPKPRRPGLYSER 793

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359493727|ref|XP_002280656.2| PREDICTED: uncharacterized protein LOC100243545 [Vitis vinifera]

 Score =  744 bits (1920), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/777 (50%), Positives = 502/777 (64%), Gaps = 44/777 (5%)

Query: 15  FILSI-KLSIAADNITPSRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPDT- 72
           ++LS+ ++S+A D I  ++ I DGE + S+   FELGFFSPG SK RYLGIWYK+     
Sbjct: 13  YVLSLLRISVAVDTIIVNQNITDGETITSAGGSFELGFFSPGNSKNRYLGIWYKKASKKP 72

Query: 73  IVWVANRNSPIFDSNAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGNLVV 132
           +VWVANR SPI DS+ VL ++  G LVL+N TNG +W+S  SR  ++P AQLL++GNLV+
Sbjct: 73  VVWVANRESPITDSSGVLKVTQPGILVLVNGTNGILWNSTSSRSAQDPNAQLLESGNLVM 132

Query: 133 RDNFSSNSSEDYLWQSFDHPSDTLLAGMKLGWDLKTGLERYQTSWKSDDDPSPGNYTHRL 192
           R N +    E++LWQSFD+P DTLL GMKLG +   GL+RY +SWKS DDPS GN+T+ +
Sbjct: 133 R-NGNDRDPENFLWQSFDYPCDTLLPGMKLGRNRVAGLDRYLSSWKSADDPSKGNFTYWI 191

Query: 193 DIHVLPKLCTYNGSVKLLCSGPWNGAIFAAIPS------YSYLYKPTVVDNEDEIYYRYD 246
           D    P+L   NG       GPWNG  F+ IP       YSY Y    V NE EIYY Y 
Sbjct: 192 DPSGFPQLLLRNGLAVAFRPGPWNGIRFSGIPQLTINPVYSYEY----VSNEKEIYYIYS 247

Query: 247 SYNSPVIMTLKLNPSGKIQHLIWNERNRTWEAFFSLPDRFCQFYGHCGANSICSFDKKPH 306
             NS VIM L L P G  Q  IW ++   W  + +     C  Y  CG N IC  D+ P+
Sbjct: 248 LVNSSVIMRLVLTPDGAAQRSIWTDKKNEWTLYSTAQRDQCDNYAICGVNGICKIDQSPN 307

Query: 307 CECLKGFELKSHHN---KTRPGTCVRSQSSDCKSGDRFIMLDDVKLPDFVEASLNESMNV 363
           CEC+KGF  K   N   +     CVRS   DC+ GD F+    VKLPD   +  NESMN+
Sbjct: 308 CECMKGFRPKFQSNWDMEDWSNGCVRSTPLDCQKGDGFVKYSGVKLPDTRSSWFNESMNL 367

Query: 364 KECEAECLKNCTCRAYANSKVTGEGSGCLMWFGDLIDIRKADDRNNGQSIYIRVPASELE 423
           KEC + CL NC+C AYANS + G GSGCL+WFGDLIDIR  D   NGQ  Y+R+ A++LE
Sbjct: 368 KECASLCLSNCSCTAYANSDIRGGGSGCLLWFGDLIDIR--DFTENGQEFYVRMAAADLE 425

Query: 424 TKKSQ-----------------DMLQFDINMSIATRANELCKGNKAANSRTRDSWFPMFS 466
           T K +                  +L F   M   ++  E  +G +           P+F 
Sbjct: 426 TTKEKRLGNRLNSIFVNSLILHSILHFAAYMEHNSKGGENNEGQEHLE-------LPLFD 478

Query: 467 LASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIA 526
           L ++  AT NFS++NKLGEGGFGPVYKG L  GQE+AVK +S  S QG +EFKNE++ IA
Sbjct: 479 LDTLLNATNNFSSDNKLGEGGFGPVYKGILQEGQEIAVKMMSKTSRQGLKEFKNEVESIA 538

Query: 527 KLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQG 586
           KLQHRNLV+LLGCCI   E++LIYE+MPNKSLD F+FD  +  +L W  R  II GIAQG
Sbjct: 539 KLQHRNLVKLLGCCIHGRERLLIYEHMPNKSLDLFIFDQMRRRVLDWPKRFLIINGIAQG 598

Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           LLYLH+ SRLR+IHRDLKA NILLD +M PKISDFG+   FGG+E+++ T R+  T GYM
Sbjct: 599 LLYLHRDSRLRIIHRDLKAENILLDNEMIPKISDFGITGSFGGNEIETNTTRVARTLGYM 658

Query: 647 SPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNT-NSLTLLGHAWDLWKDDRAWEL 705
           SPEYA++GL+S KSDVFSFGVL+LE +S KRN  F++  + L+LLGHAW  + +DR+ E 
Sbjct: 659 SPEYAREGLYSTKSDVFSFGVLVLEIVSGKRNKGFNHPYHDLSLLGHAWTFFMEDRSSEF 718

Query: 706 IDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPRQPAF 762
           ID ++ N  +   +   IN+GLLCVQ    DRP+M  VV ML ++   LP P++P F
Sbjct: 719 IDASMGNTCNLSEVLCSINLGLLCVQRFPEDRPSMHSVVLMLGSEGA-LPQPKEPYF 774

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147799241|emb|CAN77004.1| hypothetical protein VITISV_027305 [Vitis vinifera]

 Score =  739 bits (1909), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/823 (48%), Positives = 530/823 (64%), Gaps = 45/823 (5%)

Query: 10  FISCVFILS-----IKLSIAADNITPSRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGI 64
           F   VF+ S     +++S A D+IT ++ I+DGE ++S+   FELGF   G SK +YLGI
Sbjct: 4   FTELVFLFSYVISILRISTAVDSITANQHIKDGETIISAGGNFELGFVHLGTSKNQYLGI 63

Query: 65  WYKQI-PDTIVWVANRNSPIFDSNAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQ 123
           WYK++ P T+VWVANR  P+ DS+  L +++ G LV+LN +NG IWSSN SR  +NP AQ
Sbjct: 64  WYKKVTPRTVVWVANRELPVTDSSGXLKVTDQGSLVILNGSNGLIWSSNSSRSARNPTAQ 123

Query: 124 LLDTGNLVVRDNFSSNSSEDYLWQSFDHPSDTLLAGMKLGWDLKTGLERYQTSWKSDDDP 183
           LLD+GNLV++    S+  +++LWQSFD+P DTLL GMK G +  TGL+RY +SWKS+DDP
Sbjct: 124 LLDSGNLVIKSGNDSDP-DNFLWQSFDYPGDTLLPGMKHGRNTVTGLDRYLSSWKSNDDP 182

Query: 184 SPGNYTHRLDIHVLPKLCTYNGSVKLLCSGPWNGAIFAAIPSY--SYLYKPTVVDNEDEI 241
           S G++T+ LD    P+L   +GS  +  SGPWNG  F   P    + ++  + V NE E+
Sbjct: 183 SKGDFTYGLDPSGCPQLFLRSGSTVIFRSGPWNGIRFNGFPELRPNPVFNYSFVFNEKEM 242

Query: 242 YYRYDSYNSPVIMTLKLNPSGKIQHLIWNERNRTWEAFFSLPDRFCQFYGHCGANSICSF 301
           Y+ Y   NS V+  L LNP+G +Q LIW  R ++W  + +     C  Y  CGA S C+ 
Sbjct: 243 YFTYKLVNSSVLSRLVLNPNGNVQRLIWIGRTKSWNVYSTAYKDDCDSYALCGAYSTCNI 302

Query: 302 DKKPHCECLKGFELKSHHN---KTRPGTCVRSQSSDCKSGDRFIMLDDVKLPDFVEASLN 358
            + P C C+KGF  K  +          CVR  S DC+ GD F     VKLPD   +  N
Sbjct: 303 HRSPRCGCMKGFVPKFPYQWDTMDWSNGCVRKTSLDCQKGDGFAKYSGVKLPDTRNSWFN 362

Query: 359 ESMNVKECEAECLKNCTCRAYANSKVTGEGSGCLMWFGDLIDIRKADDRNNGQSIYIRVP 418
           ESMN+KEC + C +NC+C AY NS + G GSGCL+WFGDLIDI++  +  NGQ  YIR+ 
Sbjct: 363 ESMNLKECASLCFRNCSCSAYTNSDIKGGGSGCLLWFGDLIDIKEFTE--NGQDFYIRMA 420

Query: 419 ASELE-----TKK-----------SQDMLQFDINMSIATR------ANELCKGNKAANSR 456
           ASEL+     TK+              +L   + + +  +        EL       N R
Sbjct: 421 ASELDAISKVTKRRWVIVSTVSIAGMILLSLVVTLYLLKKRLKRKGTTELNNEGAETNER 480

Query: 457 TRDSWFPMFSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQE 516
             D   P+F L ++  AT NFS  NKLGEGGFGPVYKG L +G+E+AVKRLS +S QG +
Sbjct: 481 QEDLELPLFXLDTILNATHNFSRNNKLGEGGFGPVYKGMLQDGKEIAVKRLSKESNQGLD 540

Query: 517 EFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTR 576
           EFKNE+  I+KLQHRNLV+LLGCCI  EEK+LIYEYMPNKSL+FF+FD  +  +L W  R
Sbjct: 541 EFKNEVIYISKLQHRNLVKLLGCCIHGEEKMLIYEYMPNKSLNFFIFDGIQSMVLDWPKR 600

Query: 577 VRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKT 636
             II GIA+GLLYLHQ SRLR+IHRDLKA N+LLD +MNP+ISDFGMAR FGG+E  ++T
Sbjct: 601 FVIINGIARGLLYLHQDSRLRIIHRDLKADNVLLDNEMNPRISDFGMARSFGGNETIART 660

Query: 637 KRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTN-SLTLLGHAWD 695
           KR+VGTYGYMSPEYA  G++S+KSDVFSFGVL LE +S KRN  F++ +  L LLGHAW 
Sbjct: 661 KRVVGTYGYMSPEYAIDGVYSVKSDVFSFGVLXLEIISGKRNRGFNHPDHDLNLLGHAWT 720

Query: 696 LWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLP 755
           L+ +    ELID ++    +   + R +NVGLLCVQ    DRP M  VV ML+++   LP
Sbjct: 721 LYMEGTPLELIDASVGYTYNQSEVLRALNVGLLCVQRHPDDRPNMSSVVLMLSSEGA-LP 779

Query: 756 HPRQPAFSSIRGLKNTILPANG---KARVCSGNCLTLSEMDAR 795
            P++P F + R +    L A+    K  V SGN  T++ ++ R
Sbjct: 780 QPKEPGFFTERNM----LEADSLQCKHAVFSGNEHTITILEGR 818

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359493730|ref|XP_003634656.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Vitis vinifera]

 Score =  739 bits (1908), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/802 (49%), Positives = 512/802 (63%), Gaps = 39/802 (4%)

Query: 1   MENLHLLYNFISCVFILSIKLSIAADNITPSRFIRDGEKLVSSSQRFELGFFSPGKSKYR 60
           M+ L  +    S VF L +++S A D I  ++ IRDGE + S+   F+LGFFSPG SK R
Sbjct: 1   MDALATVVFIFSYVFSL-LRISTAVDTINVNQHIRDGETITSAGGTFQLGFFSPGDSKNR 59

Query: 61  YLGIWYKQI-PDTIVWVANRNSPIFDSNAVLTISNGGKLVLLNQTNGTIWSSNLSREVKN 119
           YLGIWYK++ P T+VWVANR SP+ DS+ VL ++  G LV+++ TNG +W+SN SR  ++
Sbjct: 60  YLGIWYKKVAPQTVVWVANRESPLTDSSGVLKVTQQGTLVVVSGTNGILWNSNSSRSAQD 119

Query: 120 PVAQLLDTGNLVVRDNFSSNSSEDYLWQSFDHPSDTLLAGMKLGWDLKTGLERYQTSWKS 179
           P AQLL++GNLV+R N + +  E++LWQSFD+P DTLL GMK GW+  TGL+RY +SWKS
Sbjct: 120 PNAQLLESGNLVMR-NGNDSDPENFLWQSFDYPCDTLLPGMKFGWNRVTGLDRYLSSWKS 178

Query: 180 DDDPSPGNYTHRLDIHVLPKLCTYNGSVKLLCSGPWNGAIFAAIPSYS--YLYKPTVVDN 237
            DDPS GN+T+ +D+   P+    NG      +GPWNG  F  IP  +   L+    V N
Sbjct: 179 ADDPSKGNFTYGIDLSGFPQPFLRNGLTVKFRAGPWNGVRFGGIPQLTNNSLFTFDYVSN 238

Query: 238 EDEIYYRYDSYNSPVIMTLKLNPSGKIQHLIWNERNRTWEAFFSLPDRFCQFYGHCGANS 297
           E EIY+ Y   NS V +   L P G  +   W ++   W  + +     C  Y  CG   
Sbjct: 239 EKEIYFIYYLVNSSVFVRRVLTPDGYSRRFTWTDKKNEWTLYSTAQRDDCDNYAICGVYG 298

Query: 298 ICSFDKKPHCECLKGFELKSHHN---KTRPGTCVRSQSSDCKSGDRFIMLDDVKLPDFVE 354
           IC  D+ P CEC+KGF  K   N         CVRS   DC+ GD F+    VKLPD   
Sbjct: 299 ICKIDESPKCECMKGFRPKFQSNWDMADWSKGCVRSTPLDCQKGDGFVKYSGVKLPDTRN 358

Query: 355 ASLNESMNVKECEAECLKNCTCRAYANSKVTGEGSGCLMWFGDLIDIRKADDRNNGQSIY 414
           +  +ESMN+KEC + CL+NC+C AYANS + G GSGCL+WF DLIDIR  D   NGQ  Y
Sbjct: 359 SWFDESMNLKECASLCLRNCSCTAYANSDIRGGGSGCLLWFDDLIDIR--DFTQNGQEFY 416

Query: 415 IRVPASELETKKSQDMLQFDINMSIATRANELCKGNKAANSRTRDSWFPMFSLASVSAAT 474
            R+ ASE               M   ++  E  +G +  +        P+F+LA++  AT
Sbjct: 417 ARMAASESGY------------MDHKSKEGENNEGQEHLD-------LPLFNLATLLNAT 457

Query: 475 ANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
            NFS ENKLGEGGFGPVYKG L  GQE+AVK +S  S QG +EFKNE++ I KLQHRNLV
Sbjct: 458 NNFSEENKLGEGGFGPVYKGILQEGQEIAVKMMSKTSRQGLKEFKNEVESITKLQHRNLV 517

Query: 535 RLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
           +LLGCCI   E++LIYEYMPNKSLD ++FD  +  +L W  R  II GIA+GLLYLHQ S
Sbjct: 518 KLLGCCIHGRERLLIYEYMPNKSLDLYIFDHMRSRVLDWPKRFLIINGIARGLLYLHQDS 577

Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG 654
           RLR+IHRDLKA NILLD +M PKISDFG+AR FGG+E ++ T R+VGT GYMSPEYA +G
Sbjct: 578 RLRIIHRDLKAENILLDNEMTPKISDFGIARSFGGNETEANTTRVVGTLGYMSPEYASEG 637

Query: 655 LFSIKSDVFSFGVLLLETLSSKRNTDFSNTN-SLTLLGHAWDLWKDDRAWELIDPTLQNE 713
           L+S KSDVFSFGVLLLE +S KRN  FS+ +  L LLGHAW L+ +  + E ID ++ N 
Sbjct: 638 LYSTKSDVFSFGVLLLEIVSGKRNRRFSHPDHDLNLLGHAWTLYIEGGSLEFIDTSIVNT 697

Query: 714 ASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPRQPAFSSIRGLKNTIL 773
            + + + R INVGLLCVQ    DRP+M  V+ ML ++    P P++P F + R +     
Sbjct: 698 CNLIEVLRSINVGLLCVQRFPDDRPSMHSVILMLGSEGAP-PRPKEPCFFTDRNMM---- 752

Query: 774 PANGKARVCSGNCLTLSEMDAR 795
               +A   SG   T++ ++AR
Sbjct: 753 ----EANSSSGIQPTITLLEAR 770

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302143157|emb|CBI20452.3| unnamed protein product [Vitis vinifera]

 Score =  738 bits (1905), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/804 (48%), Positives = 509/804 (63%), Gaps = 41/804 (5%)

Query: 15  FILSI-KLSIAADNITPSRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIP-DT 72
           ++LS+ ++S+A D I  ++ I DGE + S+   FELGFFSPG SK RYLGIWYK++   T
Sbjct: 13  YVLSLLRISVAVDTIIVNQNITDGETITSAGGSFELGFFSPGNSKNRYLGIWYKKVATGT 72

Query: 73  IVWVANRNSPIFDSNAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGNLVV 132
           +VWVANR SP+ DS+ VL ++  G LVL+N TNG +W+S+ SR  ++P AQLL++GNLV+
Sbjct: 73  VVWVANRESPLTDSSGVLKVTEQGILVLVNDTNGILWNSSSSRSAQDPNAQLLESGNLVM 132

Query: 133 RDNFSSNSSEDYLWQSFDHPSDTLLAGMKLGWDLKTGLERYQTSWKSDDDPSPGNYTHRL 192
           R N + +  E++LWQSFD+P DTLL GMK GW+  TGL+RY +SWKS DDPS GN+T+ +
Sbjct: 133 R-NGNDSDPENFLWQSFDYPCDTLLPGMKFGWNRVTGLDRYLSSWKSTDDPSKGNFTYGI 191

Query: 193 DIHVLPKLCTYNGSVKLLCSGPWNGAIFAAIPSYS--YLYKPTVVDNEDEIYYRYDSYNS 250
           D+   P+    NG      +GPWNG  F  IP  +   L+    V NE EIY  Y   NS
Sbjct: 192 DLSGFPQPFLRNGLAVKFRAGPWNGVRFGGIPQLTNNSLFTSDYVSNEKEIYSIYYLVNS 251

Query: 251 PVIMTLKLNPSGKIQHLIWNERNRTWEAFFSLPDRFCQFYGHCGANSICSFDKKPHCECL 310
            V +   L P G  +   W ++   W  + +     C  Y  CG   IC  D+ P CEC+
Sbjct: 252 SVFVRRVLTPDGYSRRFTWTDKKNEWTLYATAQSDDCDNYAICGVYGICKIDESPKCECM 311

Query: 311 KGFELKSHHN---KTRPGTCVRSQSSDCKSGDRFIMLDDVKLPDFVEASLNESMNVKECE 367
           KGF  K   N         C+RS   DC+ GD F+    VKLPD   +  NESMN+KEC 
Sbjct: 312 KGFRPKFQSNWDMADWSNGCIRSTPLDCQKGDGFVKYSGVKLPDTRNSWFNESMNLKECA 371

Query: 368 AECLKNCTCRAYANSKVTGEGSGCLMWFGDLIDIRKADDRNNGQSIYIRVPASELETKKS 427
           + CL+NC+C AYANS + G GSGCL+WFGDLIDIR  D  +NGQ  Y+R+ ASELE   S
Sbjct: 372 SLCLRNCSCTAYANSDIRGGGSGCLLWFGDLIDIR--DFTHNGQEFYVRMAASELEASSS 429

Query: 428 QD---------------------MLQFDINMSIATRANELCKGNKAANSRTRDS------ 460
                                  +L   + + +  +  +  K     +  +RD       
Sbjct: 430 IKSSSKKKKKHVIIISISTTGIVLLSLVLTLYVLKKRKKQLKRKGYMDHNSRDENNEGQA 489

Query: 461 --WFPMFSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEF 518
               P+F L ++  AT NFS+ NKLGEGGFGPVYKG L  GQE+AVK +S+ S QG +EF
Sbjct: 490 HLELPLFDLDTLLNATNNFSSYNKLGEGGFGPVYKGILQEGQEIAVKMMSNTSRQGLKEF 549

Query: 519 KNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVR 578
           KNE++ IAKLQHRNLV+LLGCCI   E++LIYEYMPNKSLDFF+FD  +   L W  R  
Sbjct: 550 KNEVESIAKLQHRNLVKLLGCCIHGRERMLIYEYMPNKSLDFFIFDQMQSVALDWSKRFL 609

Query: 579 IIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKR 638
           II GIA+GLLYLHQ SRLR+IHRDLKA NILLD +M+PKISDFG+AR FGG+E ++ T R
Sbjct: 610 IINGIARGLLYLHQDSRLRIIHRDLKAENILLDNEMSPKISDFGIARCFGGNETEANTTR 669

Query: 639 IVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTN-SLTLLGHAWDLW 697
           + GT GYMSPEYA +GL+S KSDVFSFGVL+LE +S KRN  F++ +  L LLGHAW L+
Sbjct: 670 VAGTLGYMSPEYASEGLYSTKSDVFSFGVLVLEIVSGKRNRGFNHPDHDLNLLGHAWTLF 729

Query: 698 KDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHP 757
            +DR+ E ID ++ N      + R IN+GLLCVQ    DRP+M  V  ML ++   LP P
Sbjct: 730 MEDRSSEFIDASMGNSCILSEVLRSINLGLLCVQRFPDDRPSMHSVALMLGSEGA-LPQP 788

Query: 758 RQPAFSSIRGLKNTILPANGKARV 781
           ++P F   R +     P+  ++ +
Sbjct: 789 KEPCFFIDRNMMEANSPSGIQSTI 812

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	795
TAIR|locus:2141181	850	RK3 "receptor kinase 3" [Arabi	0.475	0.444	0.501	6.6e-175
TAIR|locus:2018506	847	RK2 "receptor kinase 2" [Arabi	0.471	0.442	0.498	2.8e-174
TAIR|locus:2018546	843	RK1 "receptor kinase 1" [Arabi	0.475	0.448	0.497	6.1e-170
TAIR|locus:2141176	849	B120 [Arabidopsis thaliana (ta	0.397	0.372	0.580	3.6e-166
TAIR|locus:2131684	783	AT4G27290 [Arabidopsis thalian	0.964	0.979	0.421	2.7e-148
TAIR|locus:2200151	830	SD1-13 "S-domain-1 13" [Arabid	0.417	0.4	0.508	7.5e-148
TAIR|locus:2200908	842	AT1G61610 [Arabidopsis thalian	0.417	0.394	0.528	2e-145
TAIR|locus:2197704	831	AT1G61390 [Arabidopsis thalian	0.373	0.357	0.534	6.2e-142
TAIR|locus:2197729	805	SD1-29 "S-domain-1 29" [Arabid	0.962	0.950	0.409	1.3e-141
UNIPROTKB|O49974	848	KIK1 "Serine/threonine-protein	0.455	0.426	0.506	5.6e-141

TAIR|locus:2141181 RK3 "receptor kinase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 883 (315.9 bits), Expect = 6.6e-175, Sum P(2) = 6.6e-175
 Identities = 199/397 (50%), Positives = 258/397 (64%)

Query:   407 RNNGQSIYIRVPASELETKKSQDMLQFDINMSIATRANELCKGNKAANSRTRDSWFPMFS 466
             R   +SI I  P  + + + S+D+L  ++   I++R + + + N      T D   P+  
Sbjct:   465 RKQKRSILIETPIVDHQLR-SRDLLMNEV--VISSRRH-ISRENN-----TDDLELPLME 515

Query:   467 LASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIA 526
                V+ AT NFS  NKLG+GGFG VYKG+LL+GQE+AVKRLS  S QG +EFKNE+KLIA
Sbjct:   516 FEEVAMATNNFSNANKLGQGGFGIVYKGKLLDGQEMAVKRLSKTSVQGTDEFKNEVKLIA 575

Query:   527 KLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQG 586
             +LQH NLVR                 + N SLD  LFD ++ + L W  R  II GIA+G
Sbjct:   576 RLQHINLVRLLACCVDAGEKMLIYEYLENLSLDSHLFDKSRNSKLNWQMRFDIINGIARG 635

Query:   587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
             LLYLHQ SR R+IHRDLKASNILLDK M PKISDFGMARIFG DE ++ T+++VGTYGYM
Sbjct:   636 LLYLHQDSRFRIIHRDLKASNILLDKYMTPKISDFGMARIFGRDETEANTRKVVGTYGYM 695

Query:   647 SPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTN-SLTLLGHAWDLWKDDRAWEL 705
             SPEYA  G+FS+KSDVFSFGVLLLE +SSKRN  F N++  L LLG  W  WK+ +  E+
Sbjct:   696 SPEYAMDGIFSMKSDVFSFGVLLLEIISSKRNKGFYNSDRDLNLLGCVWRNWKEGKGLEI 755

Query:   706 IDPTLQNEAS----YLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPRQPA 761
             IDP + + +S    + IL R I +GLLCVQE A DRPTM  V+ ML +++  +P P+ P 
Sbjct:   756 IDPIITDSSSTFRQHEIL-RCIQIGLLCVQERAEDRPTMSLVILMLGSESTTIPQPKAPG 814

Query:   762 FSSIRGLKNTILPANGKARVCSG---NCLTLSEMDAR 795
             +   R L +T   ++ K R       N +T+S +DAR
Sbjct:   815 YCLERSLLDTD-SSSSKQRDDESWTVNQITVSVLDAR 850

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=ISS

GO:0005773 "vacuole" evidence=IDA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0009506 "plasmodesma" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=RCA

TAIR|locus:2018506 RK2 "receptor kinase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 884 (316.2 bits), Expect = 2.8e-174, Sum P(2) = 2.8e-174
 Identities = 199/399 (49%), Positives = 257/399 (64%)

Query:   407 RNNGQSIYIRVPASELETKKSQDMLQFDINMSIATRANELCKGNKAANSRTRDSWF---P 463
             R   +SI I+ P  +L   +SQD L            NEL K +++  S+   + +   P
Sbjct:   463 RKQKRSITIQTPIVDLV--RSQDSLM-----------NELVKASRSYTSKENKTDYLELP 509

Query:   464 MFSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIK 523
             +    +++ AT NFST+NKLG+GGFG VYKG LL+G+E+AVKRLS  S QG +EF NE++
Sbjct:   510 LMEWKALAMATNNFSTDNKLGQGGFGIVYKGMLLDGKEIAVKRLSKMSSQGTDEFMNEVR 569

Query:   524 LIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGI 583
             LIAKLQH NLVR                 + N SLD  LFD T+ + L W  R  II GI
Sbjct:   570 LIAKLQHINLVRLLGCCVDKGEKMLIYEYLENLSLDSHLFDQTRSSNLNWQKRFDIINGI 629

Query:   584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
             A+GLLYLHQ SR R+IHRDLKASN+LLDK+M PKISDFGMARIFG +E ++ T+R+VGTY
Sbjct:   630 ARGLLYLHQDSRCRIIHRDLKASNVLLDKNMTPKISDFGMARIFGREETEANTRRVVGTY 689

Query:   644 GYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTN-SLTLLGHAWDLWKDDRA 702
             GYMSPEYA  G+FS+KSDVFSFGVLLLE +S KRN  F N+N  L LLG  W  WK+ + 
Sbjct:   690 GYMSPEYAMDGIFSMKSDVFSFGVLLLEIISGKRNKGFYNSNRDLNLLGFVWRHWKEGKE 749

Query:   703 WELIDP----TLQNE-ASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHP 757
              E++DP     L +E  ++ IL R I +GLLCVQE A DRP M  V+ ML ++T  +P P
Sbjct:   750 LEIVDPINIDALSSEFPTHEIL-RCIQIGLLCVQERAEDRPVMSSVMVMLGSETTAIPQP 808

Query:   758 RQPAFSSIRG-LKNTILPANGKARVCSGNCLTLSEMDAR 795
             ++P F   R  L+     +  +   C+ N +TLS +DAR
Sbjct:   809 KRPGFCVGRSSLEVDSSSSTQRDDECTVNQVTLSVIDAR 847

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0034613 "cellular protein localization" evidence=IGI

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=ISS

TAIR|locus:2018546 RK1 "receptor kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 889 (318.0 bits), Expect = 6.1e-170, Sum P(2) = 6.1e-170
 Identities = 197/396 (49%), Positives = 257/396 (64%)

Query:   407 RNNGQSIYIRVPASELETKKSQDMLQFDINMSIATRANELCKGNKAANSRTRDSWFPMFS 466
             R   +SI I+ P   ++  +SQD L   IN  + +R     +G  +   ++     P+  
Sbjct:   459 RKQKRSITIQTP--NVDQVRSQDSL---INDVVVSR-----RGYTSKEKKSEYLELPLLE 508

Query:   467 LASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIA 526
             L +++ AT NFS +NKLG+GGFG VYKGRLL+G+E+AVKRLS  S QG +EF NE++LIA
Sbjct:   509 LEALATATNNFSNDNKLGQGGFGIVYKGRLLDGKEIAVKRLSKMSSQGTDEFMNEVRLIA 568

Query:   527 KLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQG 586
             KLQH NLVR                 + N SLD  LFD T+ + L W  R  II GIA+G
Sbjct:   569 KLQHINLVRLLGCCVDKGEKMLIYEYLENLSLDSHLFDQTRSSNLNWQKRFDIINGIARG 628

Query:   587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
             LLYLHQ SR R+IHRDLKASN+LLDK+M PKISDFGMARIFG +E ++ T+R+VGTYGYM
Sbjct:   629 LLYLHQDSRCRIIHRDLKASNVLLDKNMTPKISDFGMARIFGREETEANTRRVVGTYGYM 688

Query:   647 SPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTN-SLTLLGHAWDLWKDDRAWEL 705
             SPEYA  G+FS+KSDVFSFGVLLLE +S KRN  F N+N  L LLG  W  WK+    E+
Sbjct:   689 SPEYAMDGIFSMKSDVFSFGVLLLEIISGKRNKGFYNSNRDLNLLGFVWRHWKEGNELEI 748

Query:   706 IDP----TLQNE-ASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPRQP 760
             +DP    +L ++  ++ IL R I +GLLCVQE A DRP M  V+ ML ++T  +P P++P
Sbjct:   749 VDPINIDSLSSKFPTHEIL-RCIQIGLLCVQERAEDRPVMSSVMVMLGSETTAIPQPKRP 807

Query:   761 AFSSIRG-LKNTILPANGKARVCSGNCLTLSEMDAR 795
              F   R  L+     +  +   C+ N +TLS +DAR
Sbjct:   808 GFCIGRSPLEADSSSSTQRDDECTVNQITLSVIDAR 843

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0009875 "pollen-pistil interaction" evidence=TAS

GO:0016020 "membrane" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0019199 "transmembrane receptor protein kinase activity" evidence=ISS

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

TAIR|locus:2141176 B120 [Arabidopsis thaliana (taxid:3702)]

 Score = 913 (326.5 bits), Expect = 3.6e-166, Sum P(3) = 3.6e-166
 Identities = 187/322 (58%), Positives = 234/322 (72%)

Query:   451 KAANSRTRDSWFPMFSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQ 510
             KA N+    S  P+FSL +++ AT +F  EN+LG GGFGPVYKG L +G+E+AVKRLS +
Sbjct:   507 KAVNT----SELPVFSLNAIAIATNDFCKENELGRGGFGPVYKGVLEDGREIAVKRLSGK 562

Query:   511 SGQGQEEFKNEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENL 570
             SGQG +EFKNEI LIAKLQHRNLVR                 MPNKSLDFFLFD TK+ L
Sbjct:   563 SGQGVDEFKNEIILIAKLQHRNLVRLLGCCFEGEEKMLVYEYMPNKSLDFFLFDETKQAL 622

Query:   571 LGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD 630
             + W  R  IIEGIA+GLLYLH+ SRLR+IHRDLK SN+LLD +MNPKISDFGMARIFGG+
Sbjct:   623 IDWKLRFSIIEGIARGLLYLHRDSRLRIIHRDLKVSNVLLDAEMNPKISDFGMARIFGGN 682

Query:   631 ELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
             + ++ T R+VGTYGYMSPEYA +GLFS+KSDV+SFGVLLLE +S KRNT   ++   +L+
Sbjct:   683 QNEANTVRVVGTYGYMSPEYAMEGLFSVKSDVYSFGVLLLEIVSGKRNTSLRSSEHGSLI 742

Query:   691 GHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK 750
             G+AW L+   R+ EL+DP ++   S     R I+V +LCVQ+ AA+RP M  V+ ML + 
Sbjct:   743 GYAWYLYTHGRSEELVDPKIRVTCSKREALRCIHVAMLCVQDSAAERPNMASVLLMLESD 802

Query:   751 TINLPHPRQPAFSSIRGLKNTI 772
             T  L  PRQP F+S R  +N+I
Sbjct:   803 TATLAAPRQPTFTSTR--RNSI 822

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0006979 "response to oxidative stress" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2131684 AT4G27290 [Arabidopsis thaliana (taxid:3702)]

 Score = 1448 (514.8 bits), Expect = 2.7e-148, P = 2.7e-148
 Identities = 342/811 (42%), Positives = 465/811 (57%)

Query:     1 MENLHLLYNFISCVFILSIKLSIAADNITPSRFIRDGEKLVSSSQRFELGFFSPGKSKYR 60
             ME  ++L+  I  +F  +I L+ A D +  ++ ++DG+ +VS    FE+GFFSPG S+ R
Sbjct:     1 MEATNVLHLLIISLFS-TILLAQATDILIANQTLKDGDTIVSQGGSFEVGFFSPGGSRNR 59

Query:    61 YLGIWYKQIP-DTIVWVANRNSPIFDSNAVLTISNGGKLVLLNQTNGTIWSSNLSREVKN 119
             YLGIWYK+I   T+VWVANR+SP++D +  L +S  G L L N  N  IWSS+ S     
Sbjct:    60 YLGIWYKKISLQTVVWVANRDSPLYDLSGTLKVSENGSLCLFNDRNHIIWSSSSS----- 114

Query:   120 PVAQLLDTGNLVVR--D--NF---SSNSSEDYLWQSFDHPSDTLLAGMKLGWDLKTGLER 172
             P +Q     N +V+  D  N    +S   +DY+WQS D+P D  L GMK G +  TGL R
Sbjct:   115 PSSQKASLRNPIVQILDTGNLVVRNSGDDQDYIWQSLDYPGDMFLPGMKYGLNFVTGLNR 174

Query:   173 YQTSWKSDDDPSPGNYTHRLDIHVLPKLCTYNGSVKLLCSGPWNGAIFAAIPSY--SYLY 230
             + TSW++ DDPS GNYT+++D + +P+      SV +  +GPWNG  F  +P+   + +Y
Sbjct:   175 FLTSWRAIDDPSTGNYTNKMDPNGVPQFFLKKNSVVVFRTGPWNGLRFTGMPNLKPNPIY 234

Query:   231 KPTVVDNEDEIYYRYDSYNSPVIMTLKLNPSGKIQHLIWNERNRTWEAFFSLPDRFCQFY 290
             +   V  E+E+YY Y   N  V+  ++LNP+G +Q   W +  ++W  + S     C  Y
Sbjct:   235 RYEYVFTEEEVYYTYKLENPSVLTRMQLNPNGALQRYTWVDNLQSWNFYLSAMMDSCDQY 294

Query:   291 GHCGANSICSFDKKPHCECLKGFELKSHHNKTRPGTCVRSQSSD-CKSGDRFIMLDDVKL 349
               CG+   C+ ++ P C CLKGF  K+      P   V    S+ C    R + LD  K 
Sbjct:   295 TLCGSYGSCNINESPACRCLKGFVAKT------PQAWVAGDWSEGCV---RRVKLDCGKG 345

Query:   350 PD-FVEASLNESMNVKECEAECLKNCTCRAYANSKVTGEGSGCLMWFGDLIDIRKADDRN 408
              D F++ S  +  + +    +  KN         KV      C  +     DIR   D  
Sbjct:   346 EDGFLKISKLKLPDTRTSWYD--KNMDLNEC--KKVCLRNCTCSAY--SPFDIR---DGG 396

Query:   409 NGQSIYIRVPASELE-TKKSQDMLQFDINMSIATRANELCKGNKAANSRTRDSWFPMFSL 467
              G  ++        E  +  QD+     +  I T   E  + + +      D   P   L
Sbjct:   397 KGCILWFGDLIDIREYNENGQDLYVRLASSEIETLQRESSRVS-SRKQEEEDLELPFLDL 455

Query:   468 ASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAK 527
              +VS AT+ FS  NKLG+GGFGPVYKG L  GQEVAVKRLS  S QG EEFKNEIKLIAK
Sbjct:   456 DTVSEATSGFSAGNKLGQGGFGPVYKGTLACGQEVAVKRLSRTSRQGVEEFKNEIKLIAK 515

Query:   528 LQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGL 587
             LQHRNLV+                  PNKSLD F+FD  +   L W  RV II+GIA+G+
Sbjct:   516 LQHRNLVKILGYCVDEEERMLIYEYQPNKSLDSFIFDKERRRELDWPKRVEIIKGIARGM 575

Query:   588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
             LYLH+ SRLR+IHRDLKASN+LLD DMN KISDFG+AR  GGDE ++ T R+VGTYGYMS
Sbjct:   576 LYLHEDSRLRIIHRDLKASNVLLDSDMNAKISDFGLARTLGGDETEANTTRVVGTYGYMS 635

Query:   648 PEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNT-NSLTLLGHAWDLWKDDRAWELI 706
             PEY   G FS+KSDVFSFGVL+LE +S +RN  F N  + L LLGHAW  + +D+A+E+I
Sbjct:   636 PEYQIDGYFSLKSDVFSFGVLVLEIVSGRRNRGFRNEEHKLNLLGHAWRQFLEDKAYEII 695

Query:   707 DPTLQNEASYLI-LNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPRQPAFSSI 765
             D  +    + +  + R I++GLLCVQ+D  DRP M  VV ML+++ + L  PRQP F + 
Sbjct:   696 DEAVNESCTDISEVLRVIHIGLLCVQQDPKDRPNMSVVVLMLSSEMLLLD-PRQPGFFNE 754

Query:   766 RGLK-NTILPANGKARVCSGNCLTLSEMDAR 795
             R L  +  +  N    + S N  T+S +D R
Sbjct:   755 RNLLFSDTVSIN--LEIPSNNFQTMSVIDPR 783

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0048765 "root hair cell differentiation" evidence=RCA

TAIR|locus:2200151 SD1-13 "S-domain-1 13" [Arabidopsis thaliana (taxid:3702)]

 Score = 832 (297.9 bits), Expect = 7.5e-148, Sum P(2) = 7.5e-148
 Identities = 170/334 (50%), Positives = 219/334 (65%)

Query:   463 PMFSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEI 522
             P+F    ++ AT NFS  NKLG+GGFG VYKGRL  G ++AVKRLS  SGQG EEF NE+
Sbjct:   498 PLFEFQVLAVATNNFSITNKLGQGGFGAVYKGRLQEGLDIAVKRLSRTSGQGVEEFVNEV 557

Query:   523 KLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEG 582
              +I+KLQHRNLVR                 MP   LD +LFD  K+ LL W TR  II+G
Sbjct:   558 VVISKLQHRNLVRLLGFCIEGEERMLVYEFMPENCLDAYLFDPVKQRLLDWKTRFNIIDG 617

Query:   583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
             I +GL+YLH+ SRL++IHRDLKASNILLD+++NPKISDFG+ARIF G+E +  T R+VGT
Sbjct:   618 ICRGLMYLHRDSRLKIIHRDLKASNILLDENLNPKISDFGLARIFQGNEDEVSTVRVVGT 677

Query:   643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTN-SLTLLGHAWDLWKDDR 701
             YGYM+PEYA  GLFS KSDVFS GV+LLE +S +RN+ F N   +  L  +AW LW    
Sbjct:   678 YGYMAPEYAMGGLFSEKSDVFSLGVILLEIVSGRRNSSFYNDGQNPNLSAYAWKLWNTGE 737

Query:   702 AWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPRQPA 761
                L+DP +  E     + R ++VGLLCVQ+ A DRP++  V+ ML+++  NLP P+QPA
Sbjct:   738 DIALVDPVIFEECFENEIRRCVHVGLLCVQDHANDRPSVATVIWMLSSENSNLPEPKQPA 797

Query:   762 FSSIRGLKNTILPANGKARVCSGNCLTLSEMDAR 795
             F   RG            R    N ++L+++  R
Sbjct:   798 FIPRRGTSEVESSGQSDPRASINN-VSLTKITGR 830

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=RCA;IDA

GO:0009637 "response to blue light" evidence=RCA

GO:0010155 "regulation of proton transport" evidence=RCA

GO:0016556 "mRNA modification" evidence=RCA

TAIR|locus:2200908 AT1G61610 [Arabidopsis thaliana (taxid:3702)]

 Score = 854 (305.7 bits), Expect = 2.0e-145, Sum P(2) = 2.0e-145
 Identities = 176/333 (52%), Positives = 224/333 (67%)

Query:   463 PMFSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEI 522
             P+FS  SV++AT +F+ ENKLG+GGFG VYKG    G+E+AVKRLS +S QG EEFKNEI
Sbjct:   511 PIFSFDSVASATGDFAEENKLGQGGFGTVYKGNFSEGREIAVKRLSGKSKQGLEEFKNEI 570

Query:   523 KLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEG 582
              LIAKLQHRNLVR                 MPNKSLD FLFD +K+  L W  R  +I G
Sbjct:   571 LLIAKLQHRNLVRLLGCCIEDNEKMLLYEYMPNKSLDRFLFDESKQGSLDWRKRWEVIGG 630

Query:   583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
             IA+GLLYLH+ SRL++IHRDLKASNILLD +MNPKISDFGMARIF   +  + T R+VGT
Sbjct:   631 IARGLLYLHRDSRLKIIHRDLKASNILLDTEMNPKISDFGMARIFNYRQDHANTIRVVGT 690

Query:   643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRA 702
             YGYM+PEYA +G+FS KSDV+SFGVL+LE +S ++N  F  T+  +L+G+AW LW   + 
Sbjct:   691 YGYMAPEYAMEGIFSEKSDVYSFGVLILEIVSGRKNVSFRGTDHGSLIGYAWHLWSQGKT 750

Query:   703 WELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPRQPAF 762
              E+IDP +++        R I+VG+LC Q+    RP M  V+ ML ++T  LP PRQP F
Sbjct:   751 KEMIDPIVKDTRDVTEAMRCIHVGMLCTQDSVIHRPNMGSVLLMLESQTSQLPPPRQPTF 810

Query:   763 SSIRGLKNTILPANGKARVCSGNCLTLSEMDAR 795
              S     +  L  +G   V S N +T + +  R
Sbjct:   811 HSFLNSGDIELNFDGHD-VASVNDVTFTTIVGR 842

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

TAIR|locus:2197704 AT1G61390 [Arabidopsis thaliana (taxid:3702)]

 Score = 804 (288.1 bits), Expect = 6.2e-142, Sum P(2) = 6.2e-142
 Identities = 161/301 (53%), Positives = 213/301 (70%)

Query:   464 MFSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIK 523
             +F + ++  AT NFS+ NKLG+GGFGPVYKG+L++G+E+AVKRLSS SGQG +EF NEI+
Sbjct:   507 LFDMHTIRTATNNFSSSNKLGQGGFGPVYKGKLVDGKEIAVKRLSSSSGQGTDEFMNEIR 566

Query:   524 LIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGI 583
             LI+KLQH+NLVR                 + NKSLD FLFDST +  + W  R  II+G+
Sbjct:   567 LISKLQHKNLVRLLGCCIKGEEKLLIYEYLVNKSLDVFLFDSTLKFEIDWQKRFNIIQGV 626

Query:   584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
             A+GLLYLH+ SRLRVIHRDLK SNILLD+ M PKISDFG+AR+  G + Q  T+R+VGT 
Sbjct:   627 ARGLLYLHRDSRLRVIHRDLKVSNILLDEKMIPKISDFGLARMSQGTQYQDNTRRVVGTL 686

Query:   644 GYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAW 703
             GYM+PEYA  G+FS KSD++SFGVLLLE +  ++ + FS     TLL +AW+ W + +  
Sbjct:   687 GYMAPEYAWTGVFSEKSDIYSFGVLLLEIIIGEKISRFSEEGK-TLLAYAWESWCETKGV 745

Query:   704 ELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTIN-LPHPRQPAF 762
             +L+D  L + +    + R + +GLLCVQ   ADRP   E++SMLT  TI+ LP P+QP F
Sbjct:   746 DLLDQALADSSHPAEVGRCVQIGLLCVQHQPADRPNTLELMSMLT--TISELPSPKQPTF 803

Query:   763 S 763
             +
Sbjct:   804 T 804

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

TAIR|locus:2197729 SD1-29 "S-domain-1 29" [Arabidopsis thaliana (taxid:3702)]

 Score = 1385 (492.6 bits), Expect = 1.3e-141, P = 1.3e-141
 Identities = 335/818 (40%), Positives = 461/818 (56%)

Query:    12 SCVFILSI--KLSIAADNITPSRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQI 69
             +C+ +L I      AA N +    IR  + L S    +ELGFFSP  ++ +Y+GIW+K+I
Sbjct:     7 ACLLLLIIFPTCGYAAINTSSPLSIR--QTLSSPGGFYELGFFSPNNTQNQYVGIWFKKI 64

Query:    70 -PDTIVWVANRNSPIFDSNAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTG 128
              P  +VWVANR++P+  S A LTIS+ G L+LL+     IWS+  +       A+LLDTG
Sbjct:    65 VPRVVVWVANRDTPVTSSAANLTISSNGSLILLDGKQDVIWSTGKAFTSNKCHAELLDTG 124

Query:   129 NLVVRDNFSSNSSEDYLWQSFDHPSDTLLAGMKLGWDLKTGLERYQTSWKSDDDPSPGNY 188
             N VV D+ S N     LWQSF+H  +T+L    L +D   G +R  T+WKS+ DPSPG +
Sbjct:   125 NFVVIDDVSGNK----LWQSFEHLGNTMLPQSSLMYDTSNGKKRVLTTWKSNSDPSPGEF 180

Query:   189 THRLDIHVLPKLCTYNGSVKLLCSGPWNGAIFAAIPSY--SYLYKPTVVDNE--DEIYYR 244
             +  +   +  +     GSV     GPW    F+ I     SY+   +VV +       + 
Sbjct:   181 SLEITPQIPTQGLIRRGSVPYWRCGPWAKTRFSGISGIDASYVSPFSVVQDTAAGTGSFS 240

Query:   245 YDSYNSPVIMTLKLNPSGKIQHLIWNERNRTWEAFFSLPDRFCQFYGHCGANSICSFDKK 304
             Y +  +  +  + L P GK++ ++W++ N  W+   SLP+  C  YG CG   +C     
Sbjct:   241 YSTLRNYNLSYVTLTPEGKMK-ILWDDGNN-WKLHLSLPENPCDLYGRCGPYGLCVRSDP 298

Query:   305 PHCECLKGFELKSHHNKTR---PGTCVRSQSSDC----------KSGDRFIMLDDVKLPD 351
             P CECLKGF  KS     +      CVR     C          K  D F  + DVK PD
Sbjct:   299 PKCECLKGFVPKSDEEWGKGNWTSGCVRRTKLSCQAKSSMKTQGKDTDIFYRMTDVKTPD 358

Query:   352 FVEASLNESMNVKECEAECLKNCTCRAYANSKVTGEGSGCLMWFGDLIDIRKADDRNNGQ 411
               + +    +N ++C   CL NC+C A+A       G GCL+W G+L D       ++G+
Sbjct:   359 LHQFA--SFLNAEQCYQGCLGNCSCTAFAYIS----GIGCLVWNGELADT--VQFLSSGE 410

Query:   412 SIYIRVPASELE-TKKSQDMLQFDINMSI----ATRANEL----CKGNKA-ANSRTRD-- 459
              ++IR+ +SEL  + + + ++   +++SI       A  L     K N A  N   R   
Sbjct:   411 FLFIRLASSELAGSSRRKIIVGTTVSLSIFLILVFAAIMLWRYRAKQNDAWKNGFERQDV 470

Query:   460 SWFPMFSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFK 519
             S    F + ++  AT NFS  NKLG+GGFGPVYKG+L++G+E+ VKRL+S SGQG EEF 
Sbjct:   471 SGVNFFEMHTIRTATNNFSPSNKLGQGGFGPVYKGKLVDGKEIGVKRLASSSGQGTEEFM 530

Query:   520 NEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRI 579
             NEI LI+KLQHRNLVR                 M NKSLD F+FD   +  L W  R  I
Sbjct:   531 NEITLISKLQHRNLVRLLGYCIDGEEKLLIYEFMVNKSLDIFIFDPCLKFELDWPKRFNI 590

Query:   580 IEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRI 639
             I+GIA+GLLYLH+ SRLRVIHRDLK SNILLD  MNPKISDFG+AR+F G + Q  T+R+
Sbjct:   591 IQGIARGLLYLHRDSRLRVIHRDLKVSNILLDDRMNPKISDFGLARMFQGTQYQDNTRRV 650

Query:   640 VGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFS-NTNSLTLLGHAWDLWK 698
             VGT GYMSPEYA  GLFS KSD++SFGVL+LE +S KR + F     S  LL + WD W 
Sbjct:   651 VGTLGYMSPEYAWAGLFSEKSDIYSFGVLMLEIISGKRISRFIYGDESKGLLAYTWDSWC 710

Query:   699 DDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPR 758
             +     L+D  L +      + R + +GLLCVQ +A DRP   +V+SMLT+ T +LP P+
Sbjct:   711 ETGGSNLLDRDLTDTCQAFEVARCVQIGLLCVQHEAVDRPNTLQVLSMLTSAT-DLPVPK 769

Query:   759 QPAFSSIRGLKNT-ILPANGKARVCSGNCLTLSEMDAR 795
             QP F+ +  L +  +L AN +  + S N +T S +  R
Sbjct:   770 QPIFA-VHTLNDMPMLQANSQDFL-SVNEMTESMIQGR 805

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0046777 "protein autophosphorylation" evidence=RCA;IDA

UNIPROTKB|O49974 KIK1 "Serine/threonine-protein kinase" [Zea mays (taxid:4577)]

 Score = 885 (316.6 bits), Expect = 5.6e-141, Sum P(2) = 5.6e-141
 Identities = 189/373 (50%), Positives = 246/373 (65%)

Query:   424 TKKSQDMLQFDINMSIATRANELCKGNKAANSRTRDSWFPMFSLASVSAATANFSTENKL 483
             T+  Q+    DI+ SI  R ++  +  K+   +       ++SL  +  AT+NFS  NKL
Sbjct:   486 TQSQQNSAMLDISQSI--RFDDDVEDGKSHELK-------VYSLDRIRTATSNFSDSNKL 536

Query:   484 GEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXXXXX 543
             GEGGFGPVY G L  G+EVAVKRL   SGQG EEFKNE+ LIAKLQHRNLVR        
Sbjct:   537 GEGGFGPVYMGTLPGGEEVAVKRLCRNSGQGLEEFKNEVILIAKLQHRNLVRLLGCCIPR 596

Query:   544 XXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDL 603
                      MPNKSLD FLF+  K+ LL W  R  IIEGIA+GLLYLH+ SRLRV+HRDL
Sbjct:   597 EEKILVYEYMPNKSLDAFLFNPEKQRLLDWKKRFDIIEGIARGLLYLHRDSRLRVVHRDL 656

Query:   604 KASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVF 663
             KASNILLD DM PKISDFGMAR+FGGD+ Q  T R+VGT+GYMSPEYA +G+FS+KSDV+
Sbjct:   657 KASNILLDADMKPKISDFGMARMFGGDQNQFNTNRVVGTFGYMSPEYAMEGIFSVKSDVY 716

Query:   664 SFGVLLLETLSSKRNTDFS-NTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRY 722
              FGVL+LE ++ KR   F  + +SL + G+AW  W +D A ELIDP ++   S   + R 
Sbjct:   717 GFGVLILEIITGKRAVSFHCHEDSLNIAGYAWRQWNEDNAAELIDPVIRASCSVRQVLRC 776

Query:   723 INVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPRQPAFSSIRGLKNTILPANGKARVC 782
             I++ LLCVQ+ A +RP +  V+ ML+N + +LP+PR P    +RG +     ++ K R  
Sbjct:   777 IHIALLCVQDHADERPDIPTVILMLSNDSSSLPNPRPPTLM-LRGREIESSKSSEKDRSH 835

Query:   783 SGNCLTLSEMDAR 795
             S   +T++++  R
Sbjct:   836 SIGTVTMTQLHGR 848

GO:0005515 "protein binding" evidence=IPI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O81832	Y4729_ARATH	2, ., 7, ., 1, 1, ., 1	0.4655	0.9635	0.9782	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	0.914
3rd Layer	2.7.11	0.921

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_XI001046 hypothetical protein (802 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	795
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	3e-57
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	7e-56
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	1e-55
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	2e-51
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	2e-50
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	5e-48
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	2e-45
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	9e-42
pfam01453	109	pfam01453, B_lectin, D-mannose binding lectin	5e-40
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	3e-38
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	1e-37
cd00028	116	cd00028, B_lectin, Bulb-type mannose-specific lect	8e-37
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	9e-37
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	4e-36
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	1e-34
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	2e-34
smart00108	114	smart00108, B_lectin, Bulb-type mannose-specific l	5e-34
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	9e-32
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	1e-31
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	1e-31
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	2e-31
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	4e-31
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	4e-31
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	4e-31
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	4e-31
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	9e-31
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	1e-30
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	3e-30
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	3e-30
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	8e-30
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	9e-30
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	7e-29
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	1e-28
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	1e-28
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	2e-27
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	2e-27
pfam08276	66	pfam08276, PAN_2, PAN-like domain	8e-27
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	1e-26
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	1e-26
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	1e-26
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	2e-26
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	2e-26
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	2e-26
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	2e-26
pfam00954	110	pfam00954, S_locus_glycop, S-locus glycoprotein fa	6e-26
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	7e-26
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	1e-25
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	1e-25
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	2e-25
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	2e-25
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	3e-25
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	3e-25
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	5e-25
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	7e-25
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	7e-25
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	9e-25
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	1e-24
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	1e-24
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	1e-24
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	2e-24
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	2e-24
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	2e-24
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	2e-24
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	2e-24
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	3e-24
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	4e-24
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	4e-24
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	4e-24
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	4e-24
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	7e-24
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	8e-24
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	9e-24
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	1e-23
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	1e-23
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	1e-23
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	1e-23
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	4e-23
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	4e-23
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	5e-23
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	6e-23
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	1e-22
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	1e-22
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	1e-22
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	1e-22
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	2e-22
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	3e-22
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	3e-22
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	4e-22
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	6e-22
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	9e-22
cd01098	84	cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain	1e-21
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	1e-21
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	1e-21
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	2e-21
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	2e-21
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	2e-21
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	2e-21
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	3e-21
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	4e-21
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	4e-21
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	5e-21
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	8e-21
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	9e-21
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	9e-21
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	1e-20
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	1e-20
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	2e-20
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	4e-20
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	5e-20
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	5e-20
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	5e-20
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	7e-20
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	7e-20
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	7e-20
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	8e-20
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	9e-20
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	1e-19
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	1e-19
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	2e-19
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	2e-19
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	2e-19
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	2e-19
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	4e-19
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	4e-19
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	4e-19
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	6e-19
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	6e-19
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	1e-18
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	1e-18
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	1e-18
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	1e-18
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	2e-18
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	2e-18
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	2e-18
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	3e-18
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	4e-18
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	5e-18
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	6e-18
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	6e-18
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	6e-18
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	6e-18
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	8e-18
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	1e-17
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	1e-17
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	2e-17
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	2e-17
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	2e-17
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	3e-17
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	4e-17
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	4e-17
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	4e-17
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	5e-17
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	6e-17
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	8e-17
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	8e-17
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	9e-17
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	1e-16
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	1e-16
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	1e-16
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	2e-16
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	2e-16
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	2e-16
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	4e-16
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	5e-16
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	7e-16
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	2e-15
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	2e-15
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	2e-15
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	4e-15
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	4e-15
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	4e-15
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	4e-15
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	4e-15
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	5e-15
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	8e-15
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	9e-15
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	9e-15
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	1e-14
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	1e-14
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	1e-14
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	1e-14
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	2e-14
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	2e-14
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	2e-14
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	3e-14
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	3e-14
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	3e-14
cd05087	269	cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t	4e-14
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	5e-14
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	1e-13
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	2e-13
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	2e-13
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	3e-13
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	3e-13
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	3e-13
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	3e-13
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	4e-13
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	4e-13
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	5e-13
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	6e-13
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	6e-13
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	7e-13
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	9e-13
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	1e-12
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	2e-12
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	2e-12
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	2e-12
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	3e-12
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	3e-12
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	3e-12
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	4e-12
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	4e-12
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	5e-12
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	2e-11
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	2e-11
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	2e-11
cd05086	268	cd05086, PTKc_Aatyk2, Catalytic domain of the Prot	2e-11
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	3e-11
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	3e-11
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	5e-11
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	6e-11
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	6e-11
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	6e-11
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	7e-11
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	1e-10
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	1e-10
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	1e-10
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	1e-10
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	1e-10
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	2e-10
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	2e-10
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	2e-10
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	2e-10
smart00473	78	smart00473, PAN_AP, divergent subfamily of APPLE d	2e-10
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	4e-10
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	5e-10
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	5e-10
PHA03210	501	PHA03210, PHA03210, serine/threonine kinase US3; P	6e-10
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	9e-10
cd05037	259	cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom	1e-09
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	1e-09
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	1e-09
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	1e-09
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	2e-09
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	3e-09
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	3e-09
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	3e-09
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	3e-09
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	3e-09
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	5e-09
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	5e-09
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	6e-09
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	6e-09
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	6e-09
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	7e-09
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	1e-08
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	1e-08
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	1e-08
cd05078	258	cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat	1e-08
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	2e-08
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	3e-08
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	4e-08
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	6e-08
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	6e-08
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	7e-08
PHA02988	283	PHA02988, PHA02988, hypothetical protein; Provisio	8e-08
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	8e-08
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	9e-08
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	9e-08
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	1e-07
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	1e-07
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	1e-07
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	1e-07
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	2e-07
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	2e-07
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	2e-07
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	2e-07
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	3e-07
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	3e-07
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	3e-07
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	3e-07
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	4e-07
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	4e-07
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	4e-07
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	4e-07
cd05120	155	cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphot	6e-07
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	9e-07
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	1e-06
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	1e-06
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	1e-06
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	1e-06
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	2e-06
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	2e-06
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	3e-06
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	3e-06
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	1e-05
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	1e-05
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	2e-05
cd05076	274	cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) do	4e-05
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	5e-05
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	2e-04
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	2e-04
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	2e-04
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	3e-04
PLN03225	566	PLN03225, PLN03225, Serine/threonine-protein kinas	4e-04
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	7e-04
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	8e-04
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	8e-04
cd05077	262	cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) do	9e-04
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	0.002
cd08226	328	cd08226, PK_STRAD_beta, Pseudokinase domain of STE	0.002
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	0.002
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	0.004
cd08227	327	cd08227, PK_STRAD_alpha, Pseudokinase domain of ST	0.004

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score =  195 bits (499), Expect = 3e-57
 Identities = 96/283 (33%), Positives = 134/283 (47%), Gaps = 43/283 (15%)

Query: 480 ENKLGEGGFGPVYKGRLLNG-----QEVAVKRL-SSQSGQGQEEFKNEIKLIAKLQHRNL 533
             KLGEG FG VYKG L         EVAVK L    S Q  EEF  E +++ KL H N+
Sbjct: 4   GKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNI 63

Query: 534 VRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY 593
           V+LLG C E E  +++ EYMP   L  +L    +   L     +     IA+G+ YL   
Sbjct: 64  VKLLGVCTEEEPLMIVMEYMPGGDLLDYLRK-NRPKELSLSDLLSFALQIARGMEYLE-- 120

Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGDELQSKTKRIVGTYGYMSPEYAQ 652
                IHRDL A N L+ +++  KISDFG++R ++  D  + K  ++     +M+PE  +
Sbjct: 121 -SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGKL--PIRWMAPESLK 177

Query: 653 QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHA-WDLWKDDRAWELID---- 707
           +G F+ KSDV+SFGVLL E  +               LG   +    +    E +     
Sbjct: 178 EGKFTSKSDVWSFGVLLWEIFT---------------LGEEPYPGMSNAEVLEYLKKGYR 222

Query: 708 ---PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML 747
              P       Y ++       L C  ED  DRPT  E+V +L
Sbjct: 223 LPKPPNCPPELYKLM-------LQCWAEDPEDRPTFSELVEIL 258

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score =  192 bits (490), Expect = 7e-56
 Identities = 98/299 (32%), Positives = 136/299 (45%), Gaps = 68/299 (22%)

Query: 481 NKLGEGGFGPVYKGRLLNGQ----EVAVKRLSSQ-SGQGQEEFKNEIKLIAKLQHRNLVR 535
            KLGEG FG VYKG+L        EVAVK L    S + +++F  E +++ KL H N+VR
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVR 60

Query: 536 LLGCCIELEEKILIYEYMPNKSLDFFL------FDSTKENLLGWGTRVRIIEGIAQGLLY 589
           LLG C E E   L+ EYM    L  +L      F S +++ L     +     IA+G+ Y
Sbjct: 61  LLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEY 120

Query: 590 LHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGDELQSKTKRIVGTYGYMSP 648
           L      + +HRDL A N L+ +D+  KISDFG++R ++  D  + KT   +    +M+P
Sbjct: 121 LAS---KKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIR-WMAP 176

Query: 649 EYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID- 707
           E  + G+F+ KSDV+SFGVLL                                 WE+   
Sbjct: 177 ESLKDGIFTSKSDVWSFGVLL---------------------------------WEIFTL 203

Query: 708 -----PTLQN-EASYLILNRYI------------NVGLLCVQEDAADRPTMFEVVSMLT 748
                P L N E    +   Y              + L C Q D  DRPT  E+V  L 
Sbjct: 204 GATPYPGLSNEEVLEYLRKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score =  191 bits (487), Expect = 1e-55
 Identities = 94/283 (33%), Positives = 133/283 (46%), Gaps = 44/283 (15%)

Query: 480 ENKLGEGGFGPVYKGRLL-----NGQEVAVKRL-SSQSGQGQEEFKNEIKLIAKLQHRNL 533
             KLGEG FG VYKG+L         EVAVK L    S Q  EEF  E +++ KL H N+
Sbjct: 4   GKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNV 63

Query: 534 VRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY 593
           V+LLG C E E   ++ EYM    L  +L        L     +     IA+G+ YL   
Sbjct: 64  VKLLGVCTEEEPLYIVMEYMEGGDLLSYL--RKNRPKLSLSDLLSFALQIARGMEYLE-- 119

Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGDELQSKTKRIVGTYGYMSPEYAQ 652
                IHRDL A N L+ +++  KISDFG++R ++  D  + +  ++     +M+PE  +
Sbjct: 120 -SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYRKRGGKL--PIRWMAPESLK 176

Query: 653 QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHA-WDLWKDDRAWELID---- 707
           +G F+ KSDV+SFGVLL E  +               LG   +    ++   E +     
Sbjct: 177 EGKFTSKSDVWSFGVLLWEIFT---------------LGEQPYPGMSNEEVLEYLKNGYR 221

Query: 708 ---PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML 747
              P       Y ++       L C  ED  DRPT  E+V +L
Sbjct: 222 LPQPPNCPPELYDLM-------LQCWAEDPEDRPTFSELVEIL 257

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  178 bits (453), Expect = 2e-51
 Identities = 79/193 (40%), Positives = 108/193 (55%), Gaps = 11/193 (5%)

Query: 483 LGEGGFGPVYKGR-LLNGQEVAVKRLS-SQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCC 540
           LGEGGFG VY  R    G++VA+K +    S    EE   EI+++ KL H N+V+L G  
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60

Query: 541 IELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIH 600
            +     L+ EY    SL   L +   E  L     +RI+  I +GL YLH      +IH
Sbjct: 61  EDENHLYLVMEYCEGGSLKDLLKE--NEGKLSEDEILRILLQILEGLEYLHS---NGIIH 115

Query: 601 RDLKASNILLDKD-MNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPE-YAQQGLFSI 658
           RDLK  NILLD D    K++DFG++++   D+   KT  IVGT  YM+PE    +G +S 
Sbjct: 116 RDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKT--IVGTPAYMAPEVLLGKGYYSE 173

Query: 659 KSDVFSFGVLLLE 671
           KSD++S GV+L E
Sbjct: 174 KSDIWSLGVILYE 186

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score =  177 bits (451), Expect = 2e-50
 Identities = 77/200 (38%), Positives = 109/200 (54%), Gaps = 13/200 (6%)

Query: 482 KLGEGGFGPVYKGRLL-----NGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVR 535
           KLGEG FG VYKG L         +VAVK L   +  + +EEF  E  ++ KL H N+VR
Sbjct: 6   KLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVR 65

Query: 536 LLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSR 595
           LLG C + E   ++ EYMP   L  FL        L     +++   IA+G+ YL     
Sbjct: 66  LLGVCTQGEPLYIVTEYMPGGDLLDFL--RKHGEKLTLKDLLQMALQIAKGMEYLE---S 120

Query: 596 LRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGDELQSKTKRIVGTYGYMSPEYAQQG 654
              +HRDL A N L+ +++  KISDFG++R I+  D  + +    +    +M+PE  + G
Sbjct: 121 KNFVHRDLAARNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGKL-PIKWMAPESLKDG 179

Query: 655 LFSIKSDVFSFGVLLLETLS 674
            F+ KSDV+SFGVLL E  +
Sbjct: 180 KFTSKSDVWSFGVLLWEIFT 199

Length = 258

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  170 bits (433), Expect = 5e-48
 Identities = 88/273 (32%), Positives = 126/273 (46%), Gaps = 23/273 (8%)

Query: 477 FSTENKLGEGGFGPVYKGRLLN-GQEVAVKRL--SSQSGQGQEEFKNEIKLIAKLQHRNL 533
           +    KLG G FG VYK +    G+ VAVK L   S+  +  +  + EI+++ +L H N+
Sbjct: 1   YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNI 60

Query: 534 VRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY 593
           VRL+    + +   L+ EY     L  +L   ++   L      +I   I +GL YLH  
Sbjct: 61  VRLIDAFEDKDHLYLVMEYCEGGDLFDYL---SRGGPLSEDEAKKIALQILRGLEYLH-- 115

Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPE-YAQ 652
               +IHRDLK  NILLD++   KI+DFG+A+        S     VGT  YM+PE    
Sbjct: 116 -SNGIIHRDLKPENILLDENGVVKIADFGLAKKLLKS--SSSLTTFVGTPWYMAPEVLLG 172

Query: 653 QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLG-HAWDLWKDDRAWELIDPTLQ 711
              +  K DV+S GV+L E L+      FS  N L  L      L       E    +  
Sbjct: 173 GNGYGPKVDVWSLGVILYELLT--GKPPFSGENILDQLQLIRRILGPPLEFDEPKWSSGS 230

Query: 712 NEASYLILNRYINVGLLCVQEDAADRPTMFEVV 744
            EA  LI          C+ +D + RPT  E++
Sbjct: 231 EEAKDLIKK--------CLNKDPSKRPTAEEIL 255

Length = 260

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  162 bits (413), Expect = 2e-45
 Identities = 85/269 (31%), Positives = 118/269 (43%), Gaps = 23/269 (8%)

Query: 477 FSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEE-FKNEIKLIAKLQHRNLV 534
           +    KLGEG FG VY  R    G+ VA+K +  +  +   E    EIK++ KL+H N+V
Sbjct: 1   YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIV 60

Query: 535 RLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
           RL     + ++  L+ EY     L   L    K   L        +  I   L YLH   
Sbjct: 61  RLYDVFEDEDKLYLVMEYCEGGDLFDLL---KKRGRLSEDEARFYLRQILSALEYLHS-- 115

Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG 654
              ++HRDLK  NILLD+D + K++DFG+AR     E   K    VGT  YM+PE     
Sbjct: 116 -KGIVHRDLKPENILLDEDGHVKLADFGLARQLDPGE---KLTTFVGTPEYMAPEVLLGK 171

Query: 655 LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEA 714
            +    D++S GV+L E L+ K    F   + L  L     + K    +   +  +  EA
Sbjct: 172 GYGKAVDIWSLGVILYELLTGK--PPFPGDDQLLELFKK--IGKPKPPFPPPEWDISPEA 227

Query: 715 SYLILNRYINVGLLCVQEDAADRPTMFEV 743
             LI        LL    D   R T  E 
Sbjct: 228 KDLIRK------LLVK--DPEKRLTAEEA 248

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  153 bits (388), Expect = 9e-42
 Identities = 80/267 (29%), Positives = 126/267 (47%), Gaps = 30/267 (11%)

Query: 481 NKLGEGGFGPVYKGRLL-NGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLL 537
             LG G FG VY       G+ +AVK   LS  S +  E  + EI++++ LQH N+VR  
Sbjct: 6   ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYY 65

Query: 538 GCCIELEEK-ILIY-EYMPNKSLDFFL--FDSTKENLLGWGTRVRIIEGIAQGLLYLHQY 593
           G   + E+  + I+ EY+   SL   L  F    E ++   TR      I +GL YLH  
Sbjct: 66  GSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTR-----QILEGLAYLH-- 118

Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQ 653
               ++HRD+K +NIL+D D   K++DFG A+  G  E    T  + GT  +M+PE  + 
Sbjct: 119 -SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRG 177

Query: 654 GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID-PTLQN 712
             +   +D++S G  ++E  + K    +S   +         L+K   + E  + P   +
Sbjct: 178 EEYGRAADIWSLGCTVIEMATGKP--PWSELGN-----PMAALYKIGSSGEPPEIPEHLS 230

Query: 713 EASYLILNRYINVGLLCVQEDAADRPT 739
           E +   L +       C++ D   RPT
Sbjct: 231 EEAKDFLRK-------CLRRDPKKRPT 250

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|216511 pfam01453, B_lectin, D-mannose binding lectin

 Score =  142 bits (360), Expect = 5e-40
 Identities = 56/115 (48%), Positives = 70/115 (60%), Gaps = 6/115 (5%)

Query: 70  PDTIVWVANRNSPIFDSNAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGN 129
             T+VWVANR +P+ DS+  L + + G LVL +     +WSSN S +    VA L D GN
Sbjct: 1   NQTVVWVANRLNPLTDSSYTLILQSDGNLVLYDGNGRVVWSSNTSGKGSGCVAVLQDDGN 60

Query: 130 LVVRDNFSSNSSEDYLWQSFDHPSDTLLAGMKLGWDLKTGLERYQTSWKSDDDPS 184
           LV+ DN     S   LWQSFDHP+DTLL G K G ++  G  R  TSWKS+ DPS
Sbjct: 61  LVLYDN-----SGKVLWQSFDHPTDTLLPGQKDG-NVVIGGSRRLTSWKSNTDPS 109

These proteins include mannose-specific lectins from plants as well as bacteriocins from bacteria. Length = 109

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score =  142 bits (361), Expect = 3e-38
 Identities = 75/203 (36%), Positives = 110/203 (54%), Gaps = 16/203 (7%)

Query: 477 FSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRL 536
           F+ E KLG G FG V++G   N   VA+K L S     Q++F+ E++ + +L+H++L+ L
Sbjct: 8   FTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISL 67

Query: 537 LGCCIELEEKILIYEYMPNKSLDFFLFDS-----TKENLLGWGTRVRIIEGIAQGLLYLH 591
              C   E   +I E M   SL  FL           +L+    +V      A+G+ YL 
Sbjct: 68  FAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQV------AEGMAYLE 121

Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYA 651
           +      IHRDL A NIL+ +D+  K++DFG+AR+   D   S  K+I   Y + +PE A
Sbjct: 122 EQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKI--PYKWTAPEAA 176

Query: 652 QQGLFSIKSDVFSFGVLLLETLS 674
             G FS KSDV+SFG+LL E  +
Sbjct: 177 SHGTFSTKSDVWSFGILLYEMFT 199

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score =  142 bits (359), Expect = 1e-37
 Identities = 73/225 (32%), Positives = 110/225 (48%), Gaps = 16/225 (7%)

Query: 481 NKLGEGGFGPVYKGRLLN-----GQEVAVKRLS-SQSGQGQEEFKNEIKLIAKLQHRNLV 534
            +LGEG FG V   R        G++VAVK L+ S   Q + +F+ EI+++  L H N+V
Sbjct: 10  KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIV 69

Query: 535 RLLGCCIELEEKI--LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
           +  G C +   +   LI EY+P+ SL  +L    ++ +      +     I +G+ YL  
Sbjct: 70  KYKGVCEKPGGRSLRLIMEYLPSGSLRDYL-QRHRDQINL-KRLLLFSSQICKGMDYLGS 127

Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF--GGDELQSKTKRIVGTYGYMSPEY 650
               R IHRDL A NIL++ +   KISDFG+A++     D    K       + Y +PE 
Sbjct: 128 ---QRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWY-APEC 183

Query: 651 AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWD 695
            +   FS  SDV+SFGV L E  +    +       L ++G A  
Sbjct: 184 LRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQG 228

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|237995 cd00028, B_lectin, Bulb-type mannose-specific lectin

 Score =  133 bits (337), Expect = 8e-37
 Identities = 53/122 (43%), Positives = 70/122 (57%), Gaps = 6/122 (4%)

Query: 31  SRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPDTIVWVANRNSPIFDSNAVL 90
           S  +  G+ LVSS   FELGFF        Y  I YK    T+VWVANR++P   S+  L
Sbjct: 1   SNPLSSGQTLVSSGSLFELGFFKLIMQSRDYNLILYKGSSRTVVWVANRDNPS-GSSCTL 59

Query: 91  TISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQSFD 150
           T+ + G LV+ + +   +WSSN +R   N V  LLD GNLV+ D     S  ++LWQSFD
Sbjct: 60  TLQSDGNLVIYDGSGTVVWSSNTTRVNGNYVLVLLDDGNLVLYD-----SDGNFLWQSFD 114

Query: 151 HP 152
           +P
Sbjct: 115 YP 116

The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses. Length = 116

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score =  138 bits (350), Expect = 9e-37
 Identities = 65/200 (32%), Positives = 108/200 (54%), Gaps = 17/200 (8%)

Query: 477 FSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR 535
           F    K+G+GGFG VYK R    G+EVA+K +  +S + +E+  NEI+++ K +H N+V+
Sbjct: 2   FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVK 61

Query: 536 LLGCCIELEEKILIYEYMPNKSLDFFLFDST----KENLLGWGTRVRIIEGIAQGLLYLH 591
             G  ++ +E  ++ E+    SL   L  ST     E+ + +     + + + +GL YLH
Sbjct: 62  YYGSYLKKDELWIVMEFCSGGSLKD-LLKSTNQTLTESQIAY-----VCKELLKGLEYLH 115

Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYA 651
                 +IHRD+KA+NILL  D   K+ DFG++              +VGT  +M+PE  
Sbjct: 116 SN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQL---SDTKARNTMVGTPYWMAPEVI 169

Query: 652 QQGLFSIKSDVFSFGVLLLE 671
               +  K+D++S G+  +E
Sbjct: 170 NGKPYDYKADIWSLGITAIE 189

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score =  136 bits (345), Expect = 4e-36
 Identities = 70/207 (33%), Positives = 107/207 (51%), Gaps = 17/207 (8%)

Query: 476 NFSTENKLGEGGFGPVYKG-RLLNGQEVAVKRLSSQ--SGQGQEEFKNEIKLIAKLQHRN 532
           N+   + +G G FG VYKG  L  G  VA+K++S +    +  +    EI L+  L+H N
Sbjct: 1   NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPN 60

Query: 533 LVRLLGCCIELEEKILIY-EYMPNKSLDFFL--FDSTKENLLGWGTRVRIIEGIAQGLLY 589
           +V+ +G  IE  + + I  EY  N SL   +  F    E+L+        +  + QGL Y
Sbjct: 61  IVKYIGS-IETSDSLYIILEYAENGSLRQIIKKFGPFPESLVA-----VYVYQVLQGLAY 114

Query: 590 LHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPE 649
           LH+     VIHRD+KA+NIL  KD   K++DFG+A           +  +VGT  +M+PE
Sbjct: 115 LHEQG---VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDAS--VVGTPYWMAPE 169

Query: 650 YAQQGLFSIKSDVFSFGVLLLETLSSK 676
             +    S  SD++S G  ++E L+  
Sbjct: 170 VIEMSGASTASDIWSLGCTVIELLTGN 196

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score =  132 bits (335), Expect = 1e-34
 Identities = 75/198 (37%), Positives = 103/198 (52%), Gaps = 12/198 (6%)

Query: 477 FSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRL 536
              E KLG G FG V+ G      +VAVK L   +    E F  E +++ KL+H  LV+L
Sbjct: 8   LKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQL 66

Query: 537 LGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRL 596
              C E E   ++ EYM   SL  FL     + L      V +   IA+G+ YL      
Sbjct: 67  YAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLR-LPQLVDMAAQIAEGMAYLE---SR 122

Query: 597 RVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT---YGYMSPEYAQQ 653
             IHRDL A NIL+ +++  KI+DFG+AR+   DE  ++     G      + +PE A  
Sbjct: 123 NYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTARE----GAKFPIKWTAPEAANY 178

Query: 654 GLFSIKSDVFSFGVLLLE 671
           G F+IKSDV+SFG+LL E
Sbjct: 179 GRFTIKSDVWSFGILLTE 196

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score =  132 bits (334), Expect = 2e-34
 Identities = 80/231 (34%), Positives = 121/231 (52%), Gaps = 32/231 (13%)

Query: 465 FSLASVSAATANFSTENKLGEGGFGPVYKGRL--LNGQE----VAVKRL-SSQSGQGQEE 517
             L++V      F  E  LGEG FG VYKG L   N +     VA+K L  +   + Q+E
Sbjct: 2   IPLSAV-----RFLEE--LGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQE 54

Query: 518 FKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLF-------------D 564
           F+ E +L++ LQH N+V LLG C + +   +++EY+ +  L  FL              D
Sbjct: 55  FRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGD 114

Query: 565 STKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMA 624
            T ++ L     + I   IA G+ YL   S    +HRDL A N L+ + +  KISDFG++
Sbjct: 115 ETVKSSLDCSDFLHIAIQIAAGMEYL---SSHHFVHRDLAARNCLVGEGLTVKISDFGLS 171

Query: 625 R-IFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           R I+  D  + ++K ++    +M PE    G F+ +SD++SFGV+L E  S
Sbjct: 172 RDIYSADYYRVQSKSLLPVR-WMPPEAILYGKFTTESDIWSFGVVLWEIFS 221

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|214519 smart00108, B_lectin, Bulb-type mannose-specific lectin

 Score =  125 bits (317), Expect = 5e-34
 Identities = 51/121 (42%), Positives = 70/121 (57%), Gaps = 7/121 (5%)

Query: 31  SRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPDTIVWVANRNSPIFDSNAVL 90
           S  +  G+ LVS +  FELGFF+    +  Y  I YK    T+VWVANR++P+ D +  L
Sbjct: 1   SNTLSSGQTLVSGNSLFELGFFTLI-MQNDYNLILYKSSSRTVVWVANRDNPVSD-SCTL 58

Query: 91  TISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQSFD 150
           T+ + G LVL +     +WSSN +    N V  LLD GNLV+ D     S  ++LWQSFD
Sbjct: 59  TLQSDGNLVLYDGDGRVVWSSNTTGANGNYVLVLLDDGNLVIYD-----SDGNFLWQSFD 113

Query: 151 H 151
           +
Sbjct: 114 Y 114

Length = 114

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score =  124 bits (313), Expect = 9e-32
 Identities = 87/283 (30%), Positives = 123/283 (43%), Gaps = 43/283 (15%)

Query: 481 NKLGEGGFGPVYKG--RLLNGQE--VAVKRLS-SQSGQGQEEFKNEIKLIAKLQHRNLVR 535
            +LG G FG V KG   + +G+E  VAVK L       G++EF  E  ++A+L H  +VR
Sbjct: 1   KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVR 60

Query: 536 LLGCCIELEEKILIYEYMPNKSLDFFLFDS---TKENLLGWGTRVRIIEGIAQGLLYLHQ 592
           L+G C   E  +L+ E  P   L  +L         +L     +V      A G+ YL  
Sbjct: 61  LIGVCKG-EPLMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQV------AMGMAYLES 113

Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARI--FGGDELQSKT--KRIVGTYGYMSP 648
                 +HRDL A N+LL      KISDFGM+R    G D  ++ T  +  +  Y   +P
Sbjct: 114 ---KHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWY---AP 167

Query: 649 EYAQQGLFSIKSDVFSFGVLLLETLS--SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELI 706
           E    G FS KSDV+S+GV L E  S  +K   +      + +L     L +        
Sbjct: 168 ECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERLPR-------- 219

Query: 707 DPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
            P    +  Y I+         C +    DRPT  E+ S    
Sbjct: 220 -PEECPQEIYSIMLS-------CWKYRPEDRPTFSELESTFRR 254

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score =  124 bits (313), Expect = 1e-31
 Identities = 89/279 (31%), Positives = 138/279 (49%), Gaps = 36/279 (12%)

Query: 480 ENKLGEGGFGPVYKGRL-LNGQE---VAVKRLSSQSGQGQE-EFKNEIKLIAKLQHRNLV 534
           E  +G G FG V +GRL L G++   VA+K L + S   Q  +F  E  ++ +  H N++
Sbjct: 9   EKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNII 68

Query: 535 RLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
           RL G   +    ++I EYM N SLD FL     +     G  V ++ GIA G+ YL   S
Sbjct: 69  RLEGVVTKSRPVMIITEYMENGSLDKFL--RENDGKFTVGQLVGMLRGIASGMKYL---S 123

Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTK--RIVGTYGYMSPEYAQ 652
            +  +HRDL A NIL++ ++  K+SDFG++R     E    TK  +I     + +PE   
Sbjct: 124 EMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKI--PIRWTAPEAIA 181

Query: 653 QGLFSIKSDVFSFGVLLLETLS--SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL 710
              F+  SDV+SFG+++ E +S   +   D SN + +  +   + L           P  
Sbjct: 182 YRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRL-----------PPP 230

Query: 711 QN--EASYLILNRYINVGLLCVQEDAADRPTMFEVVSML 747
            +   A Y ++       L C Q+D  +RPT  ++VS L
Sbjct: 231 MDCPSALYQLM-------LDCWQKDRNERPTFSQIVSTL 262

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score =  123 bits (311), Expect = 1e-31
 Identities = 79/262 (30%), Positives = 128/262 (48%), Gaps = 29/262 (11%)

Query: 482 KLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCI 541
           ++G G FG V+ G  L  ++VA+K +  +    +E+F  E +++ KL H  LV+L G C 
Sbjct: 11  EIGSGQFGLVWLGYWLEKRKVAIKTIR-EGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCT 69

Query: 542 ELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHR 601
           E     L++E+M +  L  +L    +       T + +   + +G+ YL   +   VIHR
Sbjct: 70  ERSPICLVFEFMEHGCLSDYL--RAQRGKFSQETLLGMCLDVCEGMAYLESSN---VIHR 124

Query: 602 DLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT---YGYMSPEYAQQGLFSI 658
           DL A N L+ ++   K+SDFGM R    D+  S T    GT     + SPE      +S 
Sbjct: 125 DLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSST----GTKFPVKWSSPEVFSFSKYSS 180

Query: 659 KSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRA-WELIDPTLQNEASYL 717
           KSDV+SFGVL+ E  S  +    + +NS        ++ +   A + L  P L +++ Y 
Sbjct: 181 KSDVWSFGVLMWEVFSEGKTPYENRSNS--------EVVETINAGFRLYKPRLASQSVYE 232

Query: 718 ILNRYINVGLLCVQEDAADRPT 739
           ++         C +E   DRP+
Sbjct: 233 LMQH-------CWKERPEDRPS 247

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score =  123 bits (310), Expect = 2e-31
 Identities = 82/277 (29%), Positives = 129/277 (46%), Gaps = 38/277 (13%)

Query: 482 KLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNLVRLLGCC 540
           K+G+G FG VYKG L    EVAVK   S        +F  E +++ +  H N+V+L+G C
Sbjct: 2   KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVC 61

Query: 541 IELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIH 600
           ++ +   ++ E +P  SL  FL    K+N L     +++    A G+ YL   +    IH
Sbjct: 62  VQKQPIYIVMELVPGGSLLTFL--RKKKNRLTVKKLLQMSLDAAAGMEYLESKN---CIH 116

Query: 601 RDLKASNILLDKDMNPKISDFGMAR--IFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSI 658
           RDL A N L+ ++   KISDFGM+R    G   +    K+I     + +PE    G ++ 
Sbjct: 117 RDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQI--PIKWTAPEALNYGRYTS 174

Query: 659 KSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID-------PTLQ 711
           +SDV+S+G+LL ET  S  +T +                 + +  E I+       P L 
Sbjct: 175 ESDVWSYGILLWETF-SLGDTPYPG-------------MSNQQTRERIESGYRMPAPQLC 220

Query: 712 NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT 748
            E  Y ++         C   D  +RP+  E+ + L 
Sbjct: 221 PEEIYRLML-------QCWAYDPENRPSFSEIYNELQ 250

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score =  123 bits (311), Expect = 4e-31
 Identities = 63/195 (32%), Positives = 100/195 (51%), Gaps = 17/195 (8%)

Query: 482 KLGEGGFGPVYKG-RLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCC 540
           K+GEG  G VYK      G+EVA+K++  +  Q +E   NEI ++   +H N+V      
Sbjct: 26  KIGEGASGEVYKATDRATGKEVAIKKMRLRK-QNKELIINEILIMKDCKHPNIVDYYDSY 84

Query: 541 IELEEKILIYEYMPNKSL----DFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRL 596
           +  +E  ++ EYM   SL            +  +        +   + QGL YLH     
Sbjct: 85  LVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQI------AYVCREVLQGLEYLHS---Q 135

Query: 597 RVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLF 656
            VIHRD+K+ NILL KD + K++DFG A      + +SK   +VGT  +M+PE  ++  +
Sbjct: 136 NVIHRDIKSDNILLSKDGSVKLADFGFAAQLT--KEKSKRNSVVGTPYWMAPEVIKRKDY 193

Query: 657 SIKSDVFSFGVLLLE 671
             K D++S G++ +E
Sbjct: 194 GPKVDIWSLGIMCIE 208

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score =  123 bits (310), Expect = 4e-31
 Identities = 69/229 (30%), Positives = 110/229 (48%), Gaps = 35/229 (15%)

Query: 483 LGEGGFGPVYKGRLLNGQE------VAVKRLS-SQSGQGQEEFKNEIKLIAKLQHRNLVR 535
           LGEG FG V+ G   + +       VAVK L  + S   +++F+ E +L+   QH N+V+
Sbjct: 13  LGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVK 72

Query: 536 LLGCCIELEEKILIYEYMPNKSLDFFL-----------------FDSTKENLLGWGTRVR 578
             G C E +  I+++EYM +  L+ FL                  + T   LL      +
Sbjct: 73  FYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLL------Q 126

Query: 579 IIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGDELQSKTK 637
           I   IA G++YL   +    +HRDL   N L+  D+  KI DFGM+R ++  D  +    
Sbjct: 127 IAVQIASGMVYL---ASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGH 183

Query: 638 RIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNS 686
            ++    +M PE      F+ +SDV+SFGV+L E  +  +   +  +N 
Sbjct: 184 TMLPIR-WMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE 231

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score =  122 bits (307), Expect = 4e-31
 Identities = 83/271 (30%), Positives = 125/271 (46%), Gaps = 31/271 (11%)

Query: 483 LGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIE 542
           LG G FG V+ G+     +VA+K +   +   +++F  E K++ KL H NLV+L G C +
Sbjct: 12  LGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTK 70

Query: 543 LEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRD 602
                ++ EYM N  L  +L    ++  LG    + +   + + + YL        IHRD
Sbjct: 71  QRPIFIVTEYMANGCLLNYL--RERKGKLGTEWLLDMCSDVCEAMEYLESNG---FIHRD 125

Query: 603 LKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT---YGYMSPEYAQQGLFSIK 659
           L A N L+ +D   K+SDFG+AR    D+  S      GT     +  PE      FS K
Sbjct: 126 LAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQ----GTKFPVKWAPPEVFDYSRFSSK 181

Query: 660 SDVFSFGVLLLETLSSKRN--TDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYL 717
           SDV+SFGVL+ E  S  +     FSN+  +  +   + L++         P L     Y 
Sbjct: 182 SDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRLYR---------PKLAPTEVYT 232

Query: 718 ILNRYINVGLLCVQEDAADRPTMFEVVSMLT 748
           I+         C  E   DRP   +++S LT
Sbjct: 233 IMY-------SCWHEKPEDRPAFKKLLSQLT 256

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score =  122 bits (309), Expect = 4e-31
 Identities = 79/290 (27%), Positives = 128/290 (44%), Gaps = 41/290 (14%)

Query: 475 ANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRL-SSQSGQGQEEFKNEIKLIAKLQHRN 532
           ++      LG+G  G VYK R    G+  A+K++      + +++   E+K +   +   
Sbjct: 1   SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPY 60

Query: 533 LVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTK--ENLLGWGTRVRIIEGIAQGLLYL 590
           +V+  G   +  E  ++ EYM   SL   L    K  E +L +  R      I +GL YL
Sbjct: 61  VVKCYGAFYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLAYIAR-----QILKGLDYL 115

Query: 591 HQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEY 650
           H   +  +IHRD+K SN+L++     KI+DFG++++      Q  T   VGT  YMSPE 
Sbjct: 116 HT--KRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNT--FVGTVTYMSPER 171

Query: 651 AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID--- 707
            Q   +S  +D++S G+ LLE    K    F      +              +EL+    
Sbjct: 172 IQGESYSYAADIWSLGLTLLECALGK--FPFLPPGQPSF-------------FELMQAIC 216

Query: 708 ----PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTIN 753
               P+L  E        +I+    C+Q+D   RP+  E   +L +  I 
Sbjct: 217 DGPPPSLPAEEFSPEFRDFIS---ACLQKDPKKRPSAAE---LLQHPFIK 260

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score =  121 bits (305), Expect = 9e-31
 Identities = 88/265 (33%), Positives = 129/265 (48%), Gaps = 29/265 (10%)

Query: 482 KLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCI 541
           KLG G FG V++G   N   VAVK L   +    ++F  E +++ KL+H  L++L   C 
Sbjct: 13  KLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMD-PKDFLAEAQIMKKLRHPKLIQLYAVCT 71

Query: 542 ELEEKILIY-EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIH 600
            LEE I I  E M   SL  +L       L      + +   +A G+ YL   +    IH
Sbjct: 72  -LEEPIYIVTELMKYGSLLEYLQGGAGRAL-KLPQLIDMAAQVASGMAYLEAQN---YIH 126

Query: 601 RDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT---YGYMSPEYAQQGLFS 657
           RDL A N+L+ ++   K++DFG+AR+   D  +++     G      + +PE A    FS
Sbjct: 127 RDLAARNVLVGENNICKVADFGLARVIKEDIYEARE----GAKFPIKWTAPEAALYNRFS 182

Query: 658 IKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYL 717
           IKSDV+SFG+LL E ++  R      TN       A  L + D+ + +  P    +  Y 
Sbjct: 183 IKSDVWSFGILLTEIVTYGRMPYPGMTN-------AEVLQQVDQGYRMPCPPGCPKELYD 235

Query: 718 ILNRYINVGLLCVQEDAADRPTMFE 742
           I+       L C +ED  DRPT FE
Sbjct: 236 IM-------LDCWKEDPDDRPT-FE 252

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score =  120 bits (304), Expect = 1e-30
 Identities = 95/286 (33%), Positives = 139/286 (48%), Gaps = 48/286 (16%)

Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKR--LSSQSGQGQE---EFKNEIKLIAKLQHRNLVRL 536
           LG G FG VY+G  L +G   AVK   L+     GQE   + + EI L++KLQH N+V+ 
Sbjct: 8   LGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQY 67

Query: 537 LGCCIELEEKILIY-EYMPNKSLDFFL--FDSTKENLLGWGTRVRIIEGIAQGLLYLHQY 593
           LG   E E+ + I+ E +P  SL   L  + S  E ++   TR      I  GL YLH  
Sbjct: 68  LGTERE-EDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTR-----QILLGLEYLH-- 119

Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEY-AQ 652
            R   +HRD+K +NIL+D +   K++DFGMA+        S  K   G+  +M+PE  AQ
Sbjct: 120 DR-NTVHRDIKGANILVDTNGVVKLADFGMAKQV---VEFSFAKSFKGSPYWMAPEVIAQ 175

Query: 653 QGLFSIKSDVFSFGVLLLETLSSKRN-TDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQ 711
           QG + + +D++S G  +LE  + K   +      ++  +G + +L         I   L 
Sbjct: 176 QGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKEL-------PPIPDHLS 228

Query: 712 NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHP 757
           +EA   I        L C+Q D + RPT     + L      L HP
Sbjct: 229 DEAKDFI--------LKCLQRDPSLRPT----AAEL------LEHP 256

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score =  120 bits (303), Expect = 3e-30
 Identities = 62/202 (30%), Positives = 105/202 (51%), Gaps = 20/202 (9%)

Query: 483 LGEGGFGPVYKGRLL-----NGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRL 536
           LG G FG VYKG  +         VA+K L  ++  +  +E  +E  ++A + H ++VRL
Sbjct: 15  LGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRL 74

Query: 537 LGCCIELEEKILIYEYMPNKSLDFFLFDSTKE----NLLGWGTRVRIIEGIAQGLLYLHQ 592
           LG C+   +  LI + MP   L  ++ +         LL W  +      IA+G+ YL +
Sbjct: 75  LGICLS-SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQ------IAKGMSYLEE 127

Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ 652
               R++HRDL A N+L+    + KI+DFG+A++   DE +   +       +M+ E   
Sbjct: 128 K---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESIL 184

Query: 653 QGLFSIKSDVFSFGVLLLETLS 674
             +++ KSDV+S+GV + E ++
Sbjct: 185 HRIYTHKSDVWSYGVTVWELMT 206

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score =  123 bits (308), Expect = 3e-30
 Identities = 78/311 (25%), Positives = 126/311 (40%), Gaps = 20/311 (6%)

Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQ---SGQGQEEFKNEIKLIAKLQH-R 531
           ++    KLGEG FG VY  R  + + VA+K L+ +     +  E F  EI+++A L H  
Sbjct: 1   SYRILRKLGEGSFGEVYLAR--DRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPP 58

Query: 532 NLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH 591
           N+V+L     +     L+ EY+   SL+  L    ++  L     + I+  I   L YLH
Sbjct: 59  NIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH 118

Query: 592 QYSRLRVIHRDLKASNILLDKDMN-PKISDFGMARIFGGD----ELQSKTKRIVGTYGYM 646
                 +IHRD+K  NILLD+D    K+ DFG+A++         + +     VGT GYM
Sbjct: 119 ---SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYM 175

Query: 647 SPEYAQQGLF---SIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAW 703
           +PE          S  SD++S G+ L E L+      F    + +       +  +    
Sbjct: 176 APEVLLGLSLAYASSSSDIWSLGITLYELLTGL--PPFEGEKNSSATSQTLKIILELPT- 232

Query: 704 ELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPRQPAFS 763
             +   L      LI     ++    + +D  +R +    +S      + L         
Sbjct: 233 PSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKLKESDLSDLL 292

Query: 764 SIRGLKNTILP 774
                    L 
Sbjct: 293 KPDDSAPLRLS 303

Length = 384

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score =  118 bits (299), Expect = 8e-30
 Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 21/207 (10%)

Query: 481 NKLGEGGFGPVYKGR-LLNGQEVAVKR--LSSQSGQGQEEFKNEIKLIAKLQHRNLVRLL 537
            ++G+G FG VY  R   +G+   +K   LS+ S + +E+  NE+K++ KL H N+++  
Sbjct: 6   KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYY 65

Query: 538 GCCIELEEKILIYEYMPNKSLDFFLFDSTKEN-------LLGWGTRVRIIEGIAQGLLYL 590
               E  +  ++ EY     L   +    KE        +L W  +      +   L YL
Sbjct: 66  ESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQ------LCLALKYL 119

Query: 591 HQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEY 650
           H  SR +++HRD+K  NI L  +   K+ DFG++++       +KT  +VGT  Y+SPE 
Sbjct: 120 H--SR-KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKT--VVGTPYYLSPEL 174

Query: 651 AQQGLFSIKSDVFSFGVLLLETLSSKR 677
            Q   ++ KSD++S G +L E  + K 
Sbjct: 175 CQNKPYNYKSDIWSLGCVLYELCTLKH 201

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score =  118 bits (298), Expect = 9e-30
 Identities = 75/210 (35%), Positives = 109/210 (51%), Gaps = 22/210 (10%)

Query: 483 LGEGGFGPVYKGRLLN-------GQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLV 534
           LG G FG VY+G   +          VAVK L   +  Q ++EF  E  L++   H N+V
Sbjct: 3   LGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIV 62

Query: 535 RLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKEN----LLGWGTRVRIIEGIAQGLLYL 590
           +LLG C+  E + +I E M    L  +L D+  E     LL     + I   +A+G +YL
Sbjct: 63  KLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYL 122

Query: 591 HQYSRLRVIHRDLKASNILL-----DKDMNPKISDFGMAR-IFGGDELQSKTKRIVGTYG 644
            Q   +  IHRDL A N L+     D D   KI DFG+AR I+  D  + + + ++    
Sbjct: 123 EQ---MHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVR- 178

Query: 645 YMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           +M+PE    G F+ +SDV+SFGVL+ E L+
Sbjct: 179 WMAPESLLDGKFTTQSDVWSFGVLMWEILT 208

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score =  116 bits (291), Expect = 7e-29
 Identities = 88/266 (33%), Positives = 126/266 (47%), Gaps = 28/266 (10%)

Query: 480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGC 539
             KLG G FG V+ G      +VA+K L   S    E F  E  L+ +LQH  LVRL   
Sbjct: 11  VKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAV 69

Query: 540 CIELEEKILIYEYMPNKSL-DFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRV 598
             + E   +I EYM N SL DF       +  L     + +   IA+G+ ++    R   
Sbjct: 70  VTQ-EPIYIITEYMENGSLVDFLKTPEGIK--LTINKLIDMAAQIAEGMAFIE---RKNY 123

Query: 599 IHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY--GYMSPEYAQQGLF 656
           IHRDL+A+NIL+ + +  KI+DFG+AR+   +E    T R    +   + +PE    G F
Sbjct: 124 IHRDLRAANILVSETLCCKIADFGLARLIEDNEY---TAREGAKFPIKWTAPEAINYGTF 180

Query: 657 SIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASY 716
           +IKSDV+SFG+LL E ++  R      TN   +          +R + +  P    E  Y
Sbjct: 181 TIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNL-------ERGYRMPRPDNCPEELY 233

Query: 717 LILNRYINVGLLCVQEDAADRPTMFE 742
                   +  LC +E   +RPT FE
Sbjct: 234 -------ELMRLCWKEKPEERPT-FE 251

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score =  115 bits (289), Expect = 1e-28
 Identities = 69/220 (31%), Positives = 113/220 (51%), Gaps = 15/220 (6%)

Query: 476 NFSTENKLGEGGFGPVYKG-RLLNGQEVAVKR--LSSQSGQGQEEFKNEIKLIAKLQHRN 532
           +F   NK+G+G FG V+K  R  + +  A+K+  LS  + + +EE  +E +++AKL    
Sbjct: 1   DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSY 60

Query: 533 LVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENL---LGWGTRVRIIEGIAQGLLY 589
           ++R     ++  +  ++ EY  N  L   L       L     W    R    I  GL +
Sbjct: 61  IIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVW----RFFIQILLGLAH 116

Query: 590 LHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPE 649
           LH     +++HRD+K+ N+ LD   N KI D G+A++   +   + T  IVGT  Y+SPE
Sbjct: 117 LHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANT--IVGTPYYLSPE 171

Query: 650 YAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTL 689
             +   ++ KSDV++ GV+L E  + K   D +N  +L L
Sbjct: 172 LCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALIL 211

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score =  115 bits (289), Expect = 1e-28
 Identities = 67/198 (33%), Positives = 103/198 (52%), Gaps = 15/198 (7%)

Query: 483 LGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIE 542
           +G+G FG V  G    GQ+VAVK L   S   Q  F  E  ++  L+H NLV+LLG  ++
Sbjct: 14  IGKGEFGDVMLG-DYRGQKVAVKCLKDDSTAAQA-FLAEASVMTTLRHPNLVQLLGVVLQ 71

Query: 543 LEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRD 602
                ++ EYM   SL  +L  S    ++    ++     + +G+ YL +      +HRD
Sbjct: 72  GNPLYIVTEYMAKGSLVDYL-RSRGRAVITLAQQLGFALDVCEGMEYLEEK---NFVHRD 127

Query: 603 LKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY--GYMSPEYAQQGLFSIKS 660
           L A N+L+ +D+  K+SDFG+A+    +  Q +     G     + +PE  ++  FS KS
Sbjct: 128 LAARNVLVSEDLVAKVSDFGLAK----EASQGQD---SGKLPVKWTAPEALREKKFSTKS 180

Query: 661 DVFSFGVLLLETLSSKRN 678
           DV+SFG+LL E  S  R 
Sbjct: 181 DVWSFGILLWEIYSFGRV 198

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score =  112 bits (283), Expect = 2e-27
 Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 29/210 (13%)

Query: 481 NKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEF----KNEIKLIAKLQHRNLVR 535
            ++GEG +G VYK R    G+ VA+K++  +    +E F      EIKL+ KL+H N+VR
Sbjct: 5   AQIGEGTYGQVYKARNKKTGELVALKKIRME--NEKEGFPITAIREIKLLQKLRHPNIVR 62

Query: 536 LLGCCIELEEK--ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY 593
           L        +    +++EYM +   D      + E           ++ + +GL YLH  
Sbjct: 63  LKEIVTSKGKGSIYMVFEYMDH---DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSN 119

Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPE---- 649
               ++HRD+K SNIL++ D   K++DFG+AR +        T R++ T  Y  PE    
Sbjct: 120 ---GILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVI-TLWYRPPELLLG 175

Query: 650 ---YAQQGLFSIKSDVFSFGVLLLETLSSK 676
              Y        + D++S G +L E    K
Sbjct: 176 ATRY------GPEVDMWSVGCILAELFLGK 199

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score =  112 bits (281), Expect = 2e-27
 Identities = 73/231 (31%), Positives = 107/231 (46%), Gaps = 24/231 (10%)

Query: 471 SAATANFSTENKLGEGGFGPVYKG--RLLNG----QEVAVKRL-SSQSGQGQEEFKNEIK 523
                + +    LG G FG VY+G  R  +G     +VAVK L  S S Q + +F  E  
Sbjct: 2   EVPRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEAL 61

Query: 524 LIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDS----TKENLLGWGTRVRI 579
           +++K  H+N+VRL+G   E   + ++ E M    L  FL ++     + + L     +  
Sbjct: 62  IMSKFNHQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFC 121

Query: 580 IEGIAQGLLYLHQYSRLRVIHRDLKASNILLD---KDMNPKISDFGMARIFGGDELQSKT 636
              +A+G  YL +      IHRD+ A N LL         KI+DFGMAR         K 
Sbjct: 122 ARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKG 178

Query: 637 KRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-------SKRNTD 680
            R +    +M PE    G+F+ K+DV+SFGVLL E  S        + N +
Sbjct: 179 GRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE 229

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|219774 pfam08276, PAN_2, PAN-like domain

 Score =  103 bits (259), Expect = 8e-27
 Identities = 33/67 (49%), Positives = 47/67 (70%), Gaps = 1/67 (1%)

Query: 335 CKSGDRFIMLDDVKLPDFVEASLNESMNVKECEAECLKNCTCRAYANSKVTGEGSGCLMW 394
           C  GD F+ L ++KLPD   A ++ S+ +KECE  CL NC+C AYA + + G GSGCL+W
Sbjct: 1   CGGGDGFLRLPNMKLPDTTAAIVDRSIGLKECEQRCLSNCSCTAYAYADIRG-GSGCLIW 59

Query: 395 FGDLIDI 401
            G+L+D+
Sbjct: 60  TGELVDM 66

Length = 66

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score =  109 bits (274), Expect = 1e-26
 Identities = 64/197 (32%), Positives = 95/197 (48%), Gaps = 14/197 (7%)

Query: 483 LGEGGFGPVYKGRLLN-GQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLG 538
           LG+G FG V   R  + G+  A+K L  +     +  E    E  +++++ H  +V+L  
Sbjct: 1   LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLH- 59

Query: 539 CCIELEEKI-LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLR 597
              + EEK+ L+ EY P   L   L   +KE              I   L YLH    L 
Sbjct: 60  YAFQTEEKLYLVLEYAPGGELFSHL---SKEGRFSEERARFYAAEIVLALEYLH---SLG 113

Query: 598 VIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFS 657
           +I+RDLK  NILLD D + K++DFG+A+    +   S+T    GT  Y++PE      + 
Sbjct: 114 IIYRDLKPENILLDADGHIKLTDFGLAKELSSEG--SRTNTFCGTPEYLAPEVLLGKGYG 171

Query: 658 IKSDVFSFGVLLLETLS 674
              D +S GVLL E L+
Sbjct: 172 KAVDWWSLGVLLYEMLT 188

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score =  109 bits (275), Expect = 1e-26
 Identities = 87/290 (30%), Positives = 124/290 (42%), Gaps = 34/290 (11%)

Query: 475 ANFSTENKLGEGGFGPVYKGRLLNGQE------VAVKRLSSQSGQG-QEEFKNEIKLIAK 527
           +N      LG G FG V+  +    +E      V VK L     +  Q EF+ E+ +  K
Sbjct: 5   SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRK 64

Query: 528 LQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFL------FDSTKENLLGWGTRVRIIE 581
           L H+N+VRLLG C E E   +I EY     L  FL       +  K   L    +V +  
Sbjct: 65  LSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCT 124

Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            IA G+ +L   S  R +HRDL A N L+      K+S   +++     E   K +  + 
Sbjct: 125 QIALGMDHL---SNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYY-KLRNALI 180

Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKR--NTDFSNTNSLTLLGHAWDLWKD 699
              +++PE  Q+  FS KSDV+SFGVL+ E  +         S+   L  L  A  L   
Sbjct: 181 PLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQ-AGKL--- 236

Query: 700 DRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
               EL  P       Y ++ R       C   +  DRP+  E+VS L  
Sbjct: 237 ----ELPVPEGCPSRLYKLMTR-------CWAVNPKDRPSFSELVSALGE 275

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score =  109 bits (274), Expect = 1e-26
 Identities = 87/271 (32%), Positives = 133/271 (49%), Gaps = 30/271 (11%)

Query: 482 KLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCI 541
           KLG G FG V+ G   N  +VAVK L   +    + F  E  L+  LQH  LVRL     
Sbjct: 13  KLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVT 71

Query: 542 ELEEKILIYEYMPNKSL-DFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIH 600
           + E   +I EYM   SL DF   D   + LL     +     IA+G+ Y+    R   IH
Sbjct: 72  KEEPIYIITEYMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIE---RKNYIH 126

Query: 601 RDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKS 660
           RDL+A+N+L+ + +  KI+DFG+AR+   +E  ++         + +PE    G F+IKS
Sbjct: 127 RDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKF-PIKWTAPEAINFGSFTIKS 185

Query: 661 DVFSFGVLLLETLSSKR--NTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQN--EASY 716
           DV+SFG+LL E ++  +      SN++ ++ L   + +           P ++N  +  Y
Sbjct: 186 DVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRM-----------PRMENCPDELY 234

Query: 717 LILNRYINVGLLCVQEDAADRPTMFEVVSML 747
            I+         C +E A +RPT   + S+L
Sbjct: 235 DIMK-------TCWKEKAEERPTFDYLQSVL 258

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score =  109 bits (274), Expect = 2e-26
 Identities = 63/198 (31%), Positives = 96/198 (48%), Gaps = 20/198 (10%)

Query: 481 NKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKN---EIKLIAKLQHRNLVRL 536
            +LG G  G V K      G+ +AVK +  +    +   K    E+ ++ K     +V  
Sbjct: 7   GELGAGNSGVVSKVLHRPTGKIMAVKTI--RLEINEAIQKQILRELDILHKCNSPYIVGF 64

Query: 537 LGCCIELEEKILIYEYMPNKSLDFFL---FDSTKENLLGWGTRVRIIEGIAQGLLYLHQY 593
            G      +  +  EYM   SLD  L        E +LG     +I   + +GL YLH  
Sbjct: 65  YGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILG-----KIAVAVLKGLTYLH-- 117

Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQ 653
            + ++IHRD+K SNIL++     K+ DFG++    G  + S  K  VGT  YM+PE  Q 
Sbjct: 118 EKHKIIHRDVKPSNILVNSRGQIKLCDFGVS----GQLVNSLAKTFVGTSSYMAPERIQG 173

Query: 654 GLFSIKSDVFSFGVLLLE 671
             +S+KSD++S G+ L+E
Sbjct: 174 NDYSVKSDIWSLGLSLIE 191

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score =  109 bits (274), Expect = 2e-26
 Identities = 67/206 (32%), Positives = 102/206 (49%), Gaps = 22/206 (10%)

Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQEV-AVKRLSSQSGQG-QEEFKNEIKLIAKLQHRNL 533
                ++LGEG  G V K RL N   + A+K +++      Q++   E+++    +   +
Sbjct: 2   KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYI 61

Query: 534 VRLLGCCI-ELEEKILI-YEYMPNKSLDFFLFDSTKENLLGWGTRV------RIIEGIAQ 585
           V+  G  + E    I I  EY    SLD     S  + +   G R+      +I E + +
Sbjct: 62  VKYYGAFLDESSSSIGIAMEYCEGGSLD-----SIYKKVKKRGGRIGEKVLGKIAESVLK 116

Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
           GL YLH     ++IHRD+K SNILL +    K+ DFG++    G+ + S      GT  Y
Sbjct: 117 GLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVS----GELVNSLAGTFTGTSFY 169

Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLE 671
           M+PE  Q   +SI SDV+S G+ LLE
Sbjct: 170 MAPERIQGKPYSITSDVWSLGLTLLE 195

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score =  109 bits (275), Expect = 2e-26
 Identities = 87/295 (29%), Positives = 145/295 (49%), Gaps = 39/295 (13%)

Query: 482 KLGEGGFGPVYKGRLLNGQE-----------------VAVKRLSSQSGQ-GQEEFKNEIK 523
           KLGEG FG V+       ++                 VAVK L   + +  + +F  EIK
Sbjct: 12  KLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIK 71

Query: 524 LIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLF------DSTKENL--LGWGT 575
           ++++L+  N++RLL  CI  +   +I EYM N  L+ FL        + K ++  + + T
Sbjct: 72  IMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYST 131

Query: 576 RVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGDELQS 634
            + +   IA G+ YL   S L  +HRDL   N L+ K+   KI+DFGM+R ++ GD  + 
Sbjct: 132 LIFMATQIASGMKYL---SSLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRI 188

Query: 635 KTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAW 694
           +  R V    +MS E    G F+  SDV++FGV L E L+  +   +S  +   ++ +  
Sbjct: 189 Q-GRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTG 247

Query: 695 DLWKDD-RAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT 748
           + ++D  R   L  P L  ++ Y ++       L C + +A +RP+  E+ + L 
Sbjct: 248 EFFRDQGRQVYLPKPALCPDSLYKLM-------LSCWRRNAKERPSFQEIHATLL 295

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score =  109 bits (274), Expect = 2e-26
 Identities = 81/282 (28%), Positives = 130/282 (46%), Gaps = 37/282 (13%)

Query: 483 LGEGGFGPVYKGRLLN------GQEVAVKRLSSQSGQGQE-EFKNEIKLIAKLQHRNLVR 535
           LG+G FG VY+G             VA+K ++  +   +  EF NE  ++ +    ++VR
Sbjct: 14  LGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVR 73

Query: 536 LLGCCIELEEKILIYEYMPNKSLDFFLF----DSTKENLLGWGTRVRIIE---GIAQGLL 588
           LLG     +  +++ E M    L  +L     ++     LG  T  + I+    IA G+ 
Sbjct: 74  LLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMA 133

Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGDELQSKTKRIVGTYGYMS 647
           YL      + +HRDL A N ++ +D+  KI DFGM R I+  D  +   K ++    +M+
Sbjct: 134 YLAA---KKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-WMA 189

Query: 648 PEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWEL 705
           PE  + G+F+ KSDV+SFGV+L E  TL+ +     SN   L  +     L   +     
Sbjct: 190 PESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGHLDLPE----- 244

Query: 706 IDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML 747
                 ++   L+         +C Q +   RPT  E+VS L
Sbjct: 245 ---NCPDKLLELM--------RMCWQYNPKMRPTFLEIVSSL 275

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|201524 pfam00954, S_locus_glycop, S-locus glycoprotein family

 Score =  102 bits (256), Expect = 6e-26
 Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 2/108 (1%)

Query: 212 SGPWNGAIFAAIP--SYSYLYKPTVVDNEDEIYYRYDSYNSPVIMTLKLNPSGKIQHLIW 269
           SGPWNG  F+ IP       Y     +N +E+YY Y   N+ +   L L+  G ++   W
Sbjct: 3   SGPWNGIRFSGIPEMQKLSYYVYNFTENNEEVYYTYRMTNNSIYSRLTLSSEGSLERFTW 62

Query: 270 NERNRTWEAFFSLPDRFCQFYGHCGANSICSFDKKPHCECLKGFELKS 317
              ++ W  F+S P   C  YG CG    C  +  P C C+KGF  K+
Sbjct: 63  IPNSQDWNLFWSAPKDQCDVYGRCGPYGYCDVNTSPKCNCIKGFVPKN 110

In Brassicaceae, self-incompatible plants have a self/non-self recognition system. This is sporophytically controlled by multiple alleles at a single locus (S). S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles. Length = 110

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score =  108 bits (270), Expect = 7e-26
 Identities = 75/201 (37%), Positives = 101/201 (50%), Gaps = 16/201 (7%)

Query: 483 LGEGGFGPV--YKGRLLN---GQEVAVKRLSSQSGQGQEE-FKNEIKLIAKLQHRNLVRL 536
           LGEG FG V  Y     N   G+ VAVK L  + GQ     +K EI ++  L H N+V+ 
Sbjct: 12  LGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKY 71

Query: 537 LGCCIELEEKI--LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
            GCC E   K   LI EY+P  SL  +L     ++ L     +   + I +G+ YLH   
Sbjct: 72  KGCCSEQGGKGLQLIMEYVPLGSLRDYL----PKHKLNLAQLLLFAQQICEGMAYLHSQ- 126

Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGDELQSKTKRIVGTYGYMSPEYAQQ 653
               IHRDL A N+LLD D   KI DFG+A+ +  G E     +       + + E  ++
Sbjct: 127 --HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKE 184

Query: 654 GLFSIKSDVFSFGVLLLETLS 674
             FS  SDV+SFGV L E L+
Sbjct: 185 NKFSYASDVWSFGVTLYELLT 205

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score =  107 bits (269), Expect = 1e-25
 Identities = 88/298 (29%), Positives = 131/298 (43%), Gaps = 43/298 (14%)

Query: 482 KLGEGGFGPVYKGRLLNGQE-----------------VAVKRL-SSQSGQGQEEFKNEIK 523
           KLGEG FG V+       Q+                 VAVK L    S   +E+F  E+K
Sbjct: 12  KLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVK 71

Query: 524 LIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFL--------FDSTKENLLGWGT 575
           ++++L   N+ RLLG C       +I EYM N  L+ FL          +     L + T
Sbjct: 72  ILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFST 131

Query: 576 RVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGD--EL 632
            + +   IA G+ YL     L  +HRDL   N L+ K+   KI+DFGM+R ++  D   +
Sbjct: 132 LLYMATQIASGMRYL---ESLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRV 188

Query: 633 QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGH 692
           Q    R      +M+ E    G F+ KSDV++FGV L E L+  R   + +     ++ +
Sbjct: 189 QG---RAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIEN 245

Query: 693 AWDLWKDDRAWELID-PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
           A   ++DD     +  P    +  Y        + L C + D  DRPT  E+   L  
Sbjct: 246 AGHFFRDDGRQIYLPRPPNCPKDIY-------ELMLECWRRDEEDRPTFREIHLFLQR 296

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score =  107 bits (267), Expect = 1e-25
 Identities = 71/226 (31%), Positives = 112/226 (49%), Gaps = 23/226 (10%)

Query: 482 KLGEGGFGPVYKGR---LLNGQE---VAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR 535
           +LGEG FG V+      LL  Q+   VAVK L   S   +++F+ E +L+  LQH+++VR
Sbjct: 12  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVR 71

Query: 536 LLGCCIELEEKILIYEYMPNKSLDFFL---------FDSTKE---NLLGWGTRVRIIEGI 583
             G C E    ++++EYM +  L+ FL             ++     L  G  + I   I
Sbjct: 72  FYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQI 131

Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           A G++YL   + L  +HRDL   N L+ + +  KI DFGM+R     +      R +   
Sbjct: 132 ASGMVYL---ASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 188

Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNT--DFSNTNSL 687
            +M PE      F+ +SD++SFGV+L E  +  +      SNT ++
Sbjct: 189 RWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAI 234

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score =  106 bits (266), Expect = 2e-25
 Identities = 84/285 (29%), Positives = 142/285 (49%), Gaps = 47/285 (16%)

Query: 480 ENKLGEGGFGPVYKGRL-LNGQE---VAVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNLV 534
           +  +G G FG V++G L + G++   VA+K L     + Q ++F +E  ++ +  H N++
Sbjct: 10  QKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNII 69

Query: 535 RLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKE----NLLGWGTRVRIIEGIAQGLLYL 590
           RL G   + +  ++I EYM N +LD +L D   E     L+G      ++ GIA G+ YL
Sbjct: 70  RLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVG------MLRGIAAGMKYL 123

Query: 591 HQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG------ 644
              S +  +HRDL A NIL++ ++  K+SDFG++R+   D   + T     T G      
Sbjct: 124 ---SDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYT-----TSGGKIPIR 175

Query: 645 YMSPEYAQQGLFSIKSDVFSFGVLLLETLS--SKRNTDFSNTNSLTLLGHAWDLWKDDRA 702
           + +PE      F+  SDV+SFG+++ E +S   +   D SN   +  +         +  
Sbjct: 176 WTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAI---------NDG 226

Query: 703 WELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML 747
           + L  P     A Y ++       L C Q+D A RP   ++V++L
Sbjct: 227 FRLPAPMDCPSAVYQLM-------LQCWQQDRARRPRFVDIVNLL 264

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score =  106 bits (265), Expect = 2e-25
 Identities = 71/211 (33%), Positives = 116/211 (54%), Gaps = 26/211 (12%)

Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKR--LSSQSGQGQ-------EEFKNEIKLIAKLQHRN 532
           +G G FG VY G    +G+ +AVK+  L S S   +       +    EI L+ +LQH N
Sbjct: 8   IGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHEN 67

Query: 533 LVRLLGCCIELEEKILIYEYMPNKSLDFFL--FDSTKENLLGWGTRVR-IIEGIAQGLLY 589
           +V+ LG  ++ +   +  EY+P  S+   L  + + +E L      VR  +  I +GL Y
Sbjct: 68  IVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETL------VRNFVRQILKGLNY 121

Query: 590 LHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKR----IVGTYGY 645
           LH  +R  +IHRD+K +NIL+D     KISDFG+++    + L +KT      + G+  +
Sbjct: 122 LH--NR-GIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFW 178

Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           M+PE  +Q  ++ K+D++S G L++E L+ K
Sbjct: 179 MAPEVVKQTSYTRKADIWSLGCLVVEMLTGK 209

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score =  105 bits (263), Expect = 3e-25
 Identities = 73/200 (36%), Positives = 105/200 (52%), Gaps = 11/200 (5%)

Query: 480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGC 539
             KLG G FG V+ G      +VAVK L   +    E F  E +++ KL+H  LV+L   
Sbjct: 11  IKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGT-MSPESFLEEAQIMKKLRHDKLVQLYAV 69

Query: 540 CIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
             E E   ++ EYM   SL  FL D     L      V +   +A G+ Y+    R+  I
Sbjct: 70  VSE-EPIYIVTEYMSKGSLLDFLKDGEGRAL-KLPNLVDMAAQVAAGMAYIE---RMNYI 124

Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY--GYMSPEYAQQGLFS 657
           HRDL+++NIL+   +  KI+DFG+AR+   +E    T R    +   + +PE A  G F+
Sbjct: 125 HRDLRSANILVGDGLVCKIADFGLARLIEDNEY---TARQGAKFPIKWTAPEAALYGRFT 181

Query: 658 IKSDVFSFGVLLLETLSSKR 677
           IKSDV+SFG+LL E ++  R
Sbjct: 182 IKSDVWSFGILLTELVTKGR 201

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score =  106 bits (265), Expect = 3e-25
 Identities = 68/226 (30%), Positives = 110/226 (48%), Gaps = 31/226 (13%)

Query: 476 NFSTENKLGEGGFGPVYKGR---LLNGQE---VAVKRLSSQ-SGQGQEEFKNEIKLIAKL 528
           N      +G+G FG V++ R   LL  +    VAVK L  + S   Q +F+ E  L+A+ 
Sbjct: 6   NIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF 65

Query: 529 QHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFD---STKENLLGWGTRVR------- 578
            H N+V+LLG C   +   L++EYM    L+ FL       + +L    +  R       
Sbjct: 66  DHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPL 125

Query: 579 ---------IIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFG 628
                    I + +A G+ YL   S  + +HRDL   N L+ ++M  KI+DFG++R I+ 
Sbjct: 126 PLSCTEQLCIAKQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYS 182

Query: 629 GDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
            D  ++     +    +M PE      ++ +SDV+++GV+L E  S
Sbjct: 183 ADYYKASENDAIPIR-WMPPESIFYNRYTTESDVWAYGVVLWEIFS 227

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score =  104 bits (262), Expect = 5e-25
 Identities = 84/277 (30%), Positives = 119/277 (42%), Gaps = 34/277 (12%)

Query: 482 KLGEGGFGPVYKGRLLNGQ----EVAVKRLSSQSGQG-QEEFKNEIKLIAKLQHRNLVRL 536
           KLG+G FG V +G           VAVK L S       ++F  E  ++  L H NL+RL
Sbjct: 2   KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRL 61

Query: 537 LGCCIELEEKI-LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIE---GIAQGLLYLHQ 592
            G  + L   + ++ E  P  SL     D  +++ LG      + +    IA G+ YL  
Sbjct: 62  YG--VVLTHPLMMVTELAPLGSL----LDRLRKDALGHFLISTLCDYAVQIANGMRYLES 115

Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF--GGDELQSKTKRIVGTYGYMSPEY 650
               R IHRDL A NILL  D   KI DFG+ R      D    +    V  + + +PE 
Sbjct: 116 K---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKV-PFAWCAPES 171

Query: 651 AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL 710
            +   FS  SDV+ FGV L E  +      ++  +   +      L K D+  E ++   
Sbjct: 172 LRTRTFSHASDVWMFGVTLWEMFTYGEEP-WAGLSGSQI------LKKIDKEGERLE--- 221

Query: 711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML 747
           + EA         NV L C   + ADRPT   +   L
Sbjct: 222 RPEACPQ---DIYNVMLQCWAHNPADRPTFAALREFL 255

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score =  104 bits (261), Expect = 7e-25
 Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 32/207 (15%)

Query: 477 FSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR 535
           F    KLGEG +G VYK      GQ VA+K +  +     +E   EI ++ +     +V+
Sbjct: 5   FDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE--DLQEIIKEISILKQCDSPYIVK 62

Query: 536 LLGCCIELEEKILIYEY-----------MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIA 584
             G   +  +  ++ EY           + NK+L         E  +       I+    
Sbjct: 63  YYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLT--------EEEIA-----AILYQTL 109

Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG 644
           +GL YLH     + IHRD+KA NILL+++   K++DFG++         +K   ++GT  
Sbjct: 110 KGLEYLHS---NKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDT--MAKRNTVIGTPF 164

Query: 645 YMSPEYAQQGLFSIKSDVFSFGVLLLE 671
           +M+PE  Q+  ++ K+D++S G+  +E
Sbjct: 165 WMAPEVIQEIGYNNKADIWSLGITAIE 191

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score =  104 bits (261), Expect = 7e-25
 Identities = 65/219 (29%), Positives = 113/219 (51%), Gaps = 29/219 (13%)

Query: 483 LGEGGFGPVYKGR-LLNGQEVAVKRLS----SQSGQGQ--EEFKNEIKLIAKLQHRNLVR 535
           LG G F   Y+ R +  G  +AVK+++    + S Q +  E  + EI+L+A+L H +++R
Sbjct: 8   LGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIR 67

Query: 536 LLGCCIELEEKILIYEYMPNKSLDFFL--FDSTKENLLGWGTRVRIIEGIAQGLLYLHQY 593
           +LG   E     L  E+M   S+   L  + + KE ++     +   E + +GL YLH+ 
Sbjct: 68  MLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVI-----INYTEQLLRGLSYLHEN 122

Query: 594 SRLRVIHRDLKASNILLDKD-MNPKISDFGMA-----RIFGGDELQSKTKRIVGTYGYMS 647
              ++IHRD+K +N+L+D      +I+DFG A     +  G  E Q +   ++GT  +M+
Sbjct: 123 ---QIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQ---LLGTIAFMA 176

Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLSSK---RNTDFSN 683
           PE  +   +    DV+S G +++E  ++K        SN
Sbjct: 177 PEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSN 215

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score =  104 bits (261), Expect = 9e-25
 Identities = 77/226 (34%), Positives = 115/226 (50%), Gaps = 27/226 (11%)

Query: 470 VSAATANFSTENKLGEGGFGPVYKGRLLN------GQEVAVKRLSSQS-GQGQEEFKNEI 522
           ++ +T  F  E  LGE  FG VYKG L         Q VA+K L  ++ G  +EEFK+E 
Sbjct: 2   INLSTVRFMEE--LGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEA 59

Query: 523 KLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLF-------------DSTKEN 569
            + ++LQH N+V LLG   + +   +I+ Y  +  L  FL              D T ++
Sbjct: 60  MMRSRLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKS 119

Query: 570 LLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFG 628
            L     V I+  IA G+ +L   S   V+H+DL   N+L+   +N KISD G+ R ++ 
Sbjct: 120 TLEPADFVHIVTQIAAGMEFL---SSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYA 176

Query: 629 GDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
            D  +     ++    +MSPE    G FSI SD++S+GV+L E  S
Sbjct: 177 ADYYKLMGNSLLPIR-WMSPEAIMYGKFSIDSDIWSYGVVLWEVFS 221

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score =  103 bits (259), Expect = 1e-24
 Identities = 86/272 (31%), Positives = 128/272 (47%), Gaps = 37/272 (13%)

Query: 482 KLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCI 541
           +LG G FG V  G+     +VA+K +   S   ++EF  E K++ KL H  LV+L G C 
Sbjct: 11  ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCT 69

Query: 542 ELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIE---GIAQGLLYL--HQYSRL 596
           +     ++ EYM N  L  +L    +E+   +    +++E    + +G+ YL   Q+   
Sbjct: 70  KQRPIYIVTEYMSNGCLLNYL----REHGKRF-QPSQLLEMCKDVCEGMAYLESKQF--- 121

Query: 597 RVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT---YGYMSPEYAQQ 653
             IHRDL A N L+D     K+SDFG++R    DE  S     VG+     +  PE    
Sbjct: 122 --IHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSS----VGSKFPVRWSPPEVLLY 175

Query: 654 GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNE 713
             FS KSDV++FGVL+ E  S  +       NS T+        K  +   L  P L +E
Sbjct: 176 SKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVE-------KVSQGLRLYRPHLASE 228

Query: 714 ASYLILNRYINVGLLCVQEDAADRPTMFEVVS 745
             Y I+         C  E A +RPT  +++S
Sbjct: 229 KVYAIMYS-------CWHEKAEERPTFQQLLS 253

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score =  103 bits (259), Expect = 1e-24
 Identities = 70/198 (35%), Positives = 106/198 (53%), Gaps = 7/198 (3%)

Query: 480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGC 539
           E KLG+G FG V+ G       VA+K L   +    E F  E +++ KL+H  LV+L   
Sbjct: 11  EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV 69

Query: 540 CIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
             E E   ++ EYM   SL  FL     +  L     V +   IA G+ Y+    R+  +
Sbjct: 70  VSE-EPIYIVTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVE---RMNYV 124

Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRDL+A+NIL+ +++  K++DFG+AR+   +E  ++         + +PE A  G F+IK
Sbjct: 125 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIK 183

Query: 660 SDVFSFGVLLLETLSSKR 677
           SDV+SFG+LL E  +  R
Sbjct: 184 SDVWSFGILLTELTTKGR 201

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score =  104 bits (262), Expect = 1e-24
 Identities = 71/217 (32%), Positives = 110/217 (50%), Gaps = 38/217 (17%)

Query: 477 FSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFK----NEIKLIAKLQHR 531
           +    KLGEG +G VYK R    G+ VA+K++  +    +E        EI L+ +L+H 
Sbjct: 1   YEKLEKLGEGTYGVVYKARDKKTGEIVALKKI--RLDNEEEGIPSTALREISLLKELKHP 58

Query: 532 NLVRLLGCCIELEEKI-LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIA----QG 586
           N+V+LL      E K+ L++EY  +  L  +L D     L        +I+ I     +G
Sbjct: 59  NIVKLLDVIHT-ERKLYLVFEYC-DMDLKKYL-DKRPGPL-----SPNLIKSIMYQLLRG 110

Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y H +   R++HRDLK  NIL+++D   K++DFG+AR F G  L++ T  +V T  Y 
Sbjct: 111 LAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAF-GIPLRTYTHEVV-TLWYR 165

Query: 647 SPE-------YAQQGLFSIKSDVFSFGVLLLETLSSK 676
           +PE       Y      S   D++S G +  E ++ K
Sbjct: 166 APEILLGSKHY------STAVDIWSVGCIFAEMITGK 196

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score =  103 bits (258), Expect = 2e-24
 Identities = 81/275 (29%), Positives = 127/275 (46%), Gaps = 37/275 (13%)

Query: 482 KLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCI 541
           +LG G FG V+ G+     +VA+K ++ +    +E+F  E K++ KL H  LV+L G C 
Sbjct: 11  ELGSGQFGVVHLGKWRAQIKVAIKAIN-EGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCT 69

Query: 542 ELEEKILIYEYMPNKSLDFFLFDS----TKENLLGWGTRVRIIEGIAQGLLYLHQYSRLR 597
           + +   ++ E+M N  L  +L       +K+ LL       + + + +G+ YL + S   
Sbjct: 70  QQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLS------MCQDVCEGMEYLERNS--- 120

Query: 598 VIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKT--KRIVGTYGYMSPEYAQQGL 655
            IHRDL A N L+      K+SDFGM R    DE  S +  K  V    +  PE      
Sbjct: 121 FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPV---KWSPPEVFNFSK 177

Query: 656 FSIKSDVFSFGVLLLETLSSKRN--TDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNE 713
           +S KSDV+SFGVL+ E  +  +      SN   + ++   + L++         P L + 
Sbjct: 178 YSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYR---------PKLASM 228

Query: 714 ASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT 748
             Y        V   C  E    RPT  E++  +T
Sbjct: 229 TVY-------EVMYSCWHEKPEGRPTFAELLRAIT 256

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score =  103 bits (258), Expect = 2e-24
 Identities = 77/273 (28%), Positives = 129/273 (47%), Gaps = 34/273 (12%)

Query: 483 LGEGGFGP--VYK----GRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRL 536
           LG+G FG   +Y+      L+  +EV + RLS +    + +  NEI +++ LQH N++  
Sbjct: 8   LGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEK---ERRDALNEIVILSLLQHPNIIAY 64

Query: 537 LGCCIELEEKILI-YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSR 595
               ++ +  +LI  EY    +L +      K  L      +  +  I   + Y+H+   
Sbjct: 65  YNHFMD-DNTLLIEMEYANGGTL-YDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAG- 121

Query: 596 LRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGL 655
             ++HRD+K  NI L K    K+ DFG+++I G +   ++T  +VGT  YMSPE  Q   
Sbjct: 122 --ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAET--VVGTPYYMSPELCQGVK 177

Query: 656 FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWK-DDRAWELIDPTLQNEA 714
           ++ KSD+++ G +L E L+ KR   F  TN L L      + K     +  +     +E 
Sbjct: 178 YNFKSDIWALGCVLYELLTLKRT--FDATNPLNL------VVKIVQGNYTPVVSVYSSEL 229

Query: 715 SYLILNRYINVGLLCVQEDAADRPTMFEVVSML 747
             L+ +         +Q+D   RPT  EV+   
Sbjct: 230 ISLVHS--------LLQQDPEKRPTADEVLDQP 254

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score =  103 bits (258), Expect = 2e-24
 Identities = 84/289 (29%), Positives = 139/289 (48%), Gaps = 45/289 (15%)

Query: 475 ANFSTENKLGEGGFGPVYKGRL-LNGQE---VAVKRLSSQSGQGQE-EFKNEIKLIAKLQ 529
           +    E  +G G FG V  GRL L G+    VA+K L +   + Q  +F +E  ++ +  
Sbjct: 4   SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFD 63

Query: 530 HRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDS----TKENLLGWGTRVRIIEGIAQ 585
           H N++ L G   + +  +++ EYM N SLD FL       T   L+G      ++ GIA 
Sbjct: 64  HPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVG------MLRGIAS 117

Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG- 644
           G+ YL   S +  +HRDL A NIL++ ++  K+SDFG++R+   D   + T R     G 
Sbjct: 118 GMKYL---SDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTR-----GG 169

Query: 645 -----YMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKD 699
                + +PE      F+  SDV+S+G+++ E +S      +  +N         D+ K 
Sbjct: 170 KIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ--------DVIKA 221

Query: 700 -DRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML 747
            +  + L  P     A + ++       L C Q+D  +RP   ++VS+L
Sbjct: 222 IEEGYRLPAPMDCPAALHQLM-------LDCWQKDRNERPKFEQIVSIL 263

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score =  103 bits (258), Expect = 2e-24
 Identities = 65/209 (31%), Positives = 106/209 (50%), Gaps = 22/209 (10%)

Query: 483 LGEGGFGPVYKGRL----LNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRNLVRL 536
           LGEG FG V +G+L     +  +VAVK  +L   +    EEF +E   +    H N+++L
Sbjct: 7   LGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKL 66

Query: 537 LGCCIELEEK------ILIYEYMPNKSLDFFLFDSTKENL---LGWGTRVRIIEGIAQGL 587
           +G C E          ++I  +M +  L  FL  S    L   L   T ++ +  IA G+
Sbjct: 67  IGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGM 126

Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGDEL-QSKTKRIVGTYGY 645
            YL   S    IHRDL A N +L +DM   ++DFG+++ I+ GD   Q +  ++     +
Sbjct: 127 EYL---SNRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKM--PVKW 181

Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           ++ E     +++ KSDV++FGV + E  +
Sbjct: 182 IAIESLADRVYTSKSDVWAFGVTMWEIAT 210

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score =  104 bits (260), Expect = 2e-24
 Identities = 80/273 (29%), Positives = 131/273 (47%), Gaps = 39/273 (14%)

Query: 477 FSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKN---EIKLIAKLQHRN 532
           F+   ++G G FG VY  R +   + VA+K++S    Q  E++++   E++ + +L+H N
Sbjct: 17  FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPN 76

Query: 533 LVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRI---IEGIAQGLLY 589
            +   GC +      L+ EY    + D  + +  K+ L      V I     G  QGL Y
Sbjct: 77  TIEYKGCYLREHTAWLVMEYCLGSASD--ILEVHKKPL----QEVEIAAICHGALQGLAY 130

Query: 590 LHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPE 649
           LH + R   IHRD+KA NILL +    K++DFG A       L S     VGT  +M+PE
Sbjct: 131 LHSHER---IHRDIKAGNILLTEPGTVKLADFGSA------SLVSPANSFVGTPYWMAPE 181

Query: 650 Y---AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELI 706
                 +G +  K DV+S G+  +E   ++R     N N+++ L H   + ++D      
Sbjct: 182 VILAMDEGQYDGKVDVWSLGITCIEL--AERKPPLFNMNAMSALYH---IAQND------ 230

Query: 707 DPTLQNEASYLILNRYINVGLLCVQEDAADRPT 739
            PTL +         +++    C+Q+   DRP+
Sbjct: 231 SPTLSSNDWSDYFRNFVD---SCLQKIPQDRPS 260

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score =  102 bits (255), Expect = 3e-24
 Identities = 79/278 (28%), Positives = 128/278 (46%), Gaps = 27/278 (9%)

Query: 475 ANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
            +   E KLG G FG V+        +VAVK +   S    E F  E  ++  LQH  LV
Sbjct: 6   ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLV 64

Query: 535 RLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
           +L    +  E   +I E+M   SL  FL  S + +       +     IA+G+ ++ Q +
Sbjct: 65  KL-HAVVTKEPIYIITEFMAKGSLLDFL-KSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN 122

Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG 654
               IHRDL+A+NIL+   +  KI+DFG+AR+   +E  ++         + +PE    G
Sbjct: 123 ---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF-PIKWTAPEAINFG 178

Query: 655 LFSIKSDVFSFGVLLLETLSSKRN--TDFSNTNSLTLLGHAWDLWKDDRA-WELIDPTLQ 711
            F+IKSDV+SFG+LL+E ++  R      SN   +  L   + + + +    EL +    
Sbjct: 179 SFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYN---- 234

Query: 712 NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
                        + + C +    +RPT   + S+L +
Sbjct: 235 -------------IMMRCWKNRPEERPTFEYIQSVLDD 259

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score =  102 bits (255), Expect = 4e-24
 Identities = 67/204 (32%), Positives = 107/204 (52%), Gaps = 19/204 (9%)

Query: 483 LGEGGFGPVYKGRLLN-GQEVAVKR-----LSSQSGQGQEEFKNEIKLIAKLQHRNLVRL 536
           LG+G FG VY    ++ G+E+AVK+      S ++ +     + EI+L+  LQH  +V+ 
Sbjct: 10  LGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQY 69

Query: 537 LGCCIELEEKILIY-EYMPNKSLDFFL--FDSTKENLLGWGTRVRIIEGIAQGLLYLHQY 593
            GC +  +E + I+ EYMP  S+   L  + +  E +    TR      I +G+ YLH  
Sbjct: 70  YGC-LRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTR-----QILEGVEYLH-- 121

Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMA-RIFGGDELQSKTKRIVGTYGYMSPEYAQ 652
               ++HRD+K +NIL D   N K+ DFG + R+       +  K + GT  +MSPE   
Sbjct: 122 -SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVIS 180

Query: 653 QGLFSIKSDVFSFGVLLLETLSSK 676
              +  K+DV+S G  ++E L+ K
Sbjct: 181 GEGYGRKADVWSVGCTVVEMLTEK 204

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score =  102 bits (256), Expect = 4e-24
 Identities = 62/204 (30%), Positives = 100/204 (49%), Gaps = 12/204 (5%)

Query: 474 TANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLS----SQSGQGQEEFKNEIKLIAKL 528
             NF  E K+G+G F  VYK   LL+G+ VA+K++       +   Q+  K EI L+ +L
Sbjct: 1   LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLK-EIDLLKQL 59

Query: 529 QHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKEN-LLGWGTRVRIIEGIAQGL 587
            H N+++ L   IE  E  ++ E      L   +    K+  L+   T  +    +   L
Sbjct: 60  DHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSAL 119

Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
            ++H     R++HRD+K +N+ +      K+ D G+ R F      + +   VGT  YMS
Sbjct: 120 EHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSL--VGTPYYMS 174

Query: 648 PEYAQQGLFSIKSDVFSFGVLLLE 671
           PE   +  ++ KSD++S G LL E
Sbjct: 175 PERIHENGYNFKSDIWSLGCLLYE 198

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score =  102 bits (255), Expect = 4e-24
 Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 21/204 (10%)

Query: 483 LGEGGFGPVYKGRLLNGQ-EVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCI 541
           LG+G +G VY  R L+ Q  +A+K +  +  +  +    EI L + L+HRN+V+ LG   
Sbjct: 16  LGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDS 75

Query: 542 ELEEKILIY-EYMPNKSLDFFLFD-----STKENLLGWGTRVRIIEGIAQGLLYLHQYSR 595
           E      I+ E +P  SL   L          E  + + T+      I +GL YLH    
Sbjct: 76  E-NGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTK-----QILEGLKYLHD--- 126

Query: 596 LRVIHRDLKASNILLDKDMNP-KISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG 654
            +++HRD+K  N+L++      KISDFG ++   G  +   T+   GT  YM+PE   +G
Sbjct: 127 NQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAG--INPCTETFTGTLQYMAPEVIDKG 184

Query: 655 L--FSIKSDVFSFGVLLLETLSSK 676
              +   +D++S G  ++E  + K
Sbjct: 185 PRGYGAPADIWSLGCTIVEMATGK 208

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score =  101 bits (254), Expect = 4e-24
 Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 11/211 (5%)

Query: 483 LGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEE---FKNEIKLIAKLQHRNLVRLLGC 539
           +G G FG V+  R    Q++ + +        ++E    +NE +++  L H N++     
Sbjct: 8   VGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYEN 67

Query: 540 CIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
            +E +  +++ EY P  +L  ++       LL   T   I+    Q LL LH      ++
Sbjct: 68  FLEDKALMIVMEYAPGGTLAEYIQKRCNS-LLDEDT---ILHFFVQILLALHHVHTKLIL 123

Query: 600 HRDLKASNILLDK-DMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSI 658
           HRDLK  NILLDK  M  KI DFG+++I      +SK   +VGT  Y+SPE  +   ++ 
Sbjct: 124 HRDLKTQNILLDKHKMVVKIGDFGISKILSS---KSKAYTVVGTPCYISPELCEGKPYNQ 180

Query: 659 KSDVFSFGVLLLETLSSKRNTDFSNTNSLTL 689
           KSD+++ G +L E  S KR  + +N  +L L
Sbjct: 181 KSDIWALGCVLYELASLKRAFEAANLPALVL 211

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score =  102 bits (255), Expect = 7e-24
 Identities = 70/214 (32%), Positives = 100/214 (46%), Gaps = 35/214 (16%)

Query: 483 LGEGGFGPVYKGRL-----LNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLL 537
           LG+G FG V   R        G+ VAVK+L   + +   +F+ EI+++  LQH N+V+  
Sbjct: 12  LGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYK 71

Query: 538 GCCIEL--EEKILIYEYMPNKSLDFFL------FDSTKENLLGWGTRVRIIEGIAQGLLY 589
           G C         L+ EY+P  SL  +L       D  K  L            I +G+ Y
Sbjct: 72  GVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYAS--------QICKGMEY 123

Query: 590 LHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG----- 644
           L      R +HRDL   NIL++ +   KI DFG+ ++      Q K    V   G     
Sbjct: 124 L---GSKRYVHRDLATRNILVESENRVKIGDFGLTKVLP----QDKEYYKVREPGESPIF 176

Query: 645 YMSPEYAQQGLFSIKSDVFSFGVLLLE--TLSSK 676
           + +PE   +  FS+ SDV+SFGV+L E  T S K
Sbjct: 177 WYAPESLTESKFSVASDVWSFGVVLYELFTYSDK 210

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score =  102 bits (254), Expect = 8e-24
 Identities = 73/214 (34%), Positives = 110/214 (51%), Gaps = 25/214 (11%)

Query: 482 KLGEGGFGPVYKGRLL-----NGQEVAVKRLSS-QSGQGQEEFKNEIKLIAKLQHRNLVR 535
           +LGE  FG +YKG L      + Q VA+K L    + Q   EF+ E  L+A+L H N+V 
Sbjct: 12  ELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVC 71

Query: 536 LLGCCIELEEKILIYEYMPNKSLDFFLF--------------DSTKENLLGWGTRVRIIE 581
           LLG   + +   +++EY+    L  FL               D T ++ L  G  + I  
Sbjct: 72  LLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAI 131

Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGDELQSKTKRIV 640
            IA G+ YL  +     +H+DL A NIL+ + ++ KISD G++R I+  D  + + K ++
Sbjct: 132 QIAAGMEYLSSHF---FVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLL 188

Query: 641 GTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
               +M PE    G FS  SD++SFGV+L E  S
Sbjct: 189 PIR-WMPPEAIMYGKFSSDSDIWSFGVVLWEIFS 221

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score =  100 bits (251), Expect = 9e-24
 Identities = 71/198 (35%), Positives = 104/198 (52%), Gaps = 17/198 (8%)

Query: 482 KLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCI 541
            +GEG FG V +G    GQ+VAVK +        + F  E  ++ KL H+NLVRLLG  +
Sbjct: 13  IIGEGEFGAVLQGEYT-GQKVAVKNIKCDVTA--QAFLEETAVMTKLHHKNLVRLLGVIL 69

Query: 542 ELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHR 601
                I++ E M   +L  FL  +    L+     ++    +A+G+ YL      +++HR
Sbjct: 70  HNGLYIVM-ELMSKGNLVNFL-RTRGRALVSVIQLLQFSLDVAEGMEYLESK---KLVHR 124

Query: 602 DLKASNILLDKDMNPKISDFGMARI--FGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           DL A NIL+ +D   K+SDFG+AR+   G D  +   K       + +PE  +   FS K
Sbjct: 125 DLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPVK-------WTAPEALKHKKFSSK 177

Query: 660 SDVFSFGVLLLETLSSKR 677
           SDV+S+GVLL E  S  R
Sbjct: 178 SDVWSYGVLLWEVFSYGR 195

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score =  101 bits (253), Expect = 1e-23
 Identities = 76/270 (28%), Positives = 129/270 (47%), Gaps = 30/270 (11%)

Query: 481 NKLGEGGFGPVYKGRLL-NGQEVAVKRLS-SQSGQGQEEFKNEIKLIAKLQHRNLVRLLG 538
             +G G    VY    L N ++VA+KR+   +     +E + E++ +++  H N+V+   
Sbjct: 7   EVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYT 66

Query: 539 CCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRV 598
             +  +E  L+  Y+   SL   +  S     L       +++ + +GL YLH   +   
Sbjct: 67  SFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQ--- 123

Query: 599 IHRDLKASNILLDKDMNPKISDFGM-ARIF-GGDELQSKTKRIVGTYGYMSPEYAQQGL- 655
           IHRD+KA NILL +D + KI+DFG+ A +  GGD  +   K  VGT  +M+PE  +Q   
Sbjct: 124 IHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHG 183

Query: 656 FSIKSDVFSFGVLLLETLSSKRNTDFSNTNS-----LTLLGHAWDLWKDDRAWELIDPTL 710
           +  K+D++SFG+  +E  +      +S         LTL                  P+L
Sbjct: 184 YDFKADIWSFGITAIELATGA--APYSKYPPMKVLMLTLQNDP--------------PSL 227

Query: 711 QNEASYLILNR-YINVGLLCVQEDAADRPT 739
           +  A Y   ++ +  +  LC+Q+D + RPT
Sbjct: 228 ETGADYKKYSKSFRKMISLCLQKDPSKRPT 257

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score =  100 bits (251), Expect = 1e-23
 Identities = 64/197 (32%), Positives = 104/197 (52%), Gaps = 11/197 (5%)

Query: 478 STENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRL 536
           + ++KLG G +G VY+G        VAVK L   +    EEF  E  ++ +++H NLV+L
Sbjct: 9   TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQL 67

Query: 537 LGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRL 596
           LG C       +I E+M   +L  +L +  ++  +     + +   I+  + YL + +  
Sbjct: 68  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKN-- 124

Query: 597 RVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL--QSKTKRIVGTYGYMSPEYAQQG 654
             IHRDL A N L+ ++   K++DFG++R+  GD     +  K  +    + +PE     
Sbjct: 125 -FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPESLAYN 180

Query: 655 LFSIKSDVFSFGVLLLE 671
            FSIKSDV++FGVLL E
Sbjct: 181 KFSIKSDVWAFGVLLWE 197

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score =  100 bits (250), Expect = 1e-23
 Identities = 83/270 (30%), Positives = 133/270 (49%), Gaps = 21/270 (7%)

Query: 480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGC 539
           + KLG+G FG V+ G      +VA+K L   +    E F  E +++ KL+H  LV L   
Sbjct: 11  DVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAV 69

Query: 540 CIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
             E E   ++ E+M   SL  FL +   + L      V +   IA G+ Y+    R+  I
Sbjct: 70  VSE-EPIYIVTEFMGKGSLLDFLKEGDGKYL-KLPQLVDMAAQIADGMAYIE---RMNYI 124

Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRDL+A+NIL+  ++  KI+DFG+AR+   +E  ++         + +PE A  G F+IK
Sbjct: 125 HRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIK 183

Query: 660 SDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLIL 719
           SDV+SFG+LL E ++  R       N          L + +R + +  P    E+ + ++
Sbjct: 184 SDVWSFGILLTELVTKGRVPYPGMVNREV-------LEQVERGYRMPCPQGCPESLHELM 236

Query: 720 NRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
                   LC ++D  +RPT   + S L +
Sbjct: 237 K-------LCWKKDPDERPTFEYIQSFLED 259

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score =  101 bits (253), Expect = 1e-23
 Identities = 84/303 (27%), Positives = 142/303 (46%), Gaps = 47/303 (15%)

Query: 482 KLGEGGFGPVYKGRLLNGQE-----------------VAVKRLSSQSGQ-GQEEFKNEIK 523
           KLGEG FG V+   ++N Q+                 VAVK L   + +  + +F  E+K
Sbjct: 12  KLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVK 71

Query: 524 LIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFF-----LFDSTKENLLGWG---- 574
           ++++L+  N++RLLG C++ +   +I EYM N  L+ F     L D  +           
Sbjct: 72  ILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHC 131

Query: 575 -------TRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-I 626
                  + + +   IA G+ YL   S L  +HRDL   N L+ +++  KI+DFGM+R +
Sbjct: 132 LPAISYSSLLHVALQIASGMKYL---SSLNFVHRDLATRNCLVGENLTIKIADFGMSRNL 188

Query: 627 FGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNS 686
           + GD  + +  R V    +M+ E    G F+  SDV++FGV L E L   +   +     
Sbjct: 189 YAGDYYRIQ-GRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTD 247

Query: 687 LTLLGHAWDLWKDD-RAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVS 745
             ++ +A + ++D  R   L  P    +  Y ++       L C   D  +RP+  ++ +
Sbjct: 248 EQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELM-------LQCWSRDCRERPSFSDIHA 300

Query: 746 MLT 748
            LT
Sbjct: 301 FLT 303

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score =  100 bits (249), Expect = 4e-23
 Identities = 68/233 (29%), Positives = 111/233 (47%), Gaps = 30/233 (12%)

Query: 480 ENKLGEGGFGPVYKGRLLN------GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNL 533
           + +LGEG FG V+     N         VAVK L   +   +++F+ E +L+  LQH ++
Sbjct: 10  KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI 69

Query: 534 VRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENL-------------LGWGTRVRII 580
           V+  G C + +  I+++EYM +  L+ FL     + +             LG    + I 
Sbjct: 70  VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 129

Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIV 640
             IA G++YL   +    +HRDL   N L+  ++  KI DFGM+R    D   +   R+ 
Sbjct: 130 SQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR----DVYSTDYYRVG 182

Query: 641 G----TYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTL 689
           G       +M PE      F+ +SDV+SFGV+L E  +  +   F  +N+  +
Sbjct: 183 GHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVI 235

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 99.1 bits (247), Expect = 4e-23
 Identities = 69/207 (33%), Positives = 107/207 (51%), Gaps = 25/207 (12%)

Query: 476 NFSTENKLGEGGFGPVYK-GRLLNGQEVAVKR--LSSQSGQGQEEFKNEIKLIAKLQHRN 532
           +F    KLG+G +G VYK  RL + Q  A+K   L S S + +E+  NEI+++A + H N
Sbjct: 1   DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPN 60

Query: 533 LVR-----LLGC--CIELEEKILIYEYMPNKSLDFFLFDSTK-ENLLGWGTRVRIIEGIA 584
           ++      L G   CI       + EY P   L   +    K   L+      RI   + 
Sbjct: 61  IISYKEAFLDGNKLCI-------VMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLL 113

Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG 644
           +GL  LH+    +++HRDLK++NILL  +   KI D G++++      ++  K  +GT  
Sbjct: 114 RGLQALHE---QKILHRDLKSANILLVANDLVKIGDLGISKVLK----KNMAKTQIGTPH 166

Query: 645 YMSPEYAQQGLFSIKSDVFSFGVLLLE 671
           YM+PE  +   +S KSD++S G LL E
Sbjct: 167 YMAPEVWKGRPYSYKSDIWSLGCLLYE 193

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 98.5 bits (245), Expect = 5e-23
 Identities = 68/194 (35%), Positives = 103/194 (53%), Gaps = 9/194 (4%)

Query: 483 LGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQE-EFKNEIKLIAKLQHRNLVRLLGCCI 541
           LG+G FG V+KG L +   VAVK       Q  + +F +E +++ +  H N+V+L+G C 
Sbjct: 3   LGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCT 62

Query: 542 ELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHR 601
           + +   ++ E +P    DF  F   K++ L     V+     A G+ YL   +    IHR
Sbjct: 63  QRQPIYIVMELVPGG--DFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKN---CIHR 117

Query: 602 DLKASNILLDKDMNPKISDFGMARIF-GGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKS 660
           DL A N L+ ++   KISDFGM+R    G    S  K+I     + +PE    G +S +S
Sbjct: 118 DLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQI--PIKWTAPEALNYGRYSSES 175

Query: 661 DVFSFGVLLLETLS 674
           DV+S+G+LL ET S
Sbjct: 176 DVWSYGILLWETFS 189

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 99.2 bits (248), Expect = 6e-23
 Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 35/227 (15%)

Query: 476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQ---SGQGQEEFKNEIKLIAKL-QH 530
           +F     +GEG F  V   +     +E A+K L  +     +  +  K E +++ +L  H
Sbjct: 2   DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGH 61

Query: 531 RNLVRLLGCCIELEEKI-LIYEYMPNKSLDFFL--FDSTKENLLGWGTRVRIIEGIAQGL 587
             +++L     + EE +  + EY PN  L  ++  + S  E    +         I   L
Sbjct: 62  PGIIKLY-YTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRF-----YAAEILLAL 115

Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL--------------- 632
            YLH      +IHRDLK  NILLDKDM+ KI+DFG A++   +                 
Sbjct: 116 EYLHS---KGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQI 172

Query: 633 ---QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
              + +    VGT  Y+SPE   +      SD+++ G ++ + L+ K
Sbjct: 173 EKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGK 219

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 99.0 bits (246), Expect = 1e-22
 Identities = 82/274 (29%), Positives = 128/274 (46%), Gaps = 41/274 (14%)

Query: 477 FSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKN---EIKLIAKLQHRN 532
           FS   ++G G FG VY  R + N + VA+K++S    Q  E++++   E++ + KL+H N
Sbjct: 17  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76

Query: 533 LVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
            ++  GC +      L+ EY    + D  L +  K+ L        +  G  QGL YLH 
Sbjct: 77  TIQYRGCYLREHTAWLVMEYCLGSASD--LLEVHKKPLQEVEIAA-VTHGALQGLAYLHS 133

Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEY-- 650
           ++   +IHRD+KA NILL +    K+ DFG A I       +     VGT  +M+PE   
Sbjct: 134 HN---MIHRDVKAGNILLSEPGLVKLGDFGSASIM------APANXFVGTPYWMAPEVIL 184

Query: 651 -AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT 709
              +G +  K DV+S G+  +E   ++R     N N+++ L H                 
Sbjct: 185 AMDEGQYDGKVDVWSLGITCIEL--AERKPPLFNMNAMSALYH----------------I 226

Query: 710 LQNEASYLILNR----YINVGLLCVQEDAADRPT 739
            QNE+  L        + N    C+Q+   DRPT
Sbjct: 227 AQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPT 260

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 98.1 bits (245), Expect = 1e-22
 Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 15/199 (7%)

Query: 477 FSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNLV 534
           F+    +G+G FG VYK       Q VA+K +  +  + + E+ + EI+ +++ +   + 
Sbjct: 3   FTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYIT 62

Query: 535 RLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
           +  G  ++  +  +I EY    S      D  K   L       I+  +  GL YLH+  
Sbjct: 63  KYYGSFLKGSKLWIIMEYCGGGSC----LDLLKPGKLDETYIAFILREVLLGLEYLHEE- 117

Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD--ELQSKTKRIVGTYGYMSPEYAQ 652
               IHRD+KA+NILL ++ + K++DFG++    G      SK    VGT  +M+PE  +
Sbjct: 118 --GKIHRDIKAANILLSEEGDVKLADFGVS----GQLTSTMSKRNTFVGTPFWMAPEVIK 171

Query: 653 QGLFSIKSDVFSFGVLLLE 671
           Q  +  K+D++S G+  +E
Sbjct: 172 QSGYDEKADIWSLGITAIE 190

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 99.4 bits (247), Expect = 1e-22
 Identities = 82/275 (29%), Positives = 135/275 (49%), Gaps = 33/275 (12%)

Query: 477 FSTENKLGEGGFGPVYKGRLLNGQEV-AVKRLSSQSGQGQEEFKN---EIKLIAKLQHRN 532
           F+   ++G G FG VY  R +   EV A+K++S    Q  E++++   E+K + +++H N
Sbjct: 27  FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPN 86

Query: 533 LVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
            +   GC +      L+ EY    + D  L +  K+ L        I  G  QGL YLH 
Sbjct: 87  SIEYKGCYLREHTAWLVMEYCLGSASD--LLEVHKKPLQEVEIAA-ITHGALQGLAYLHS 143

Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEY-- 650
           ++   +IHRD+KA NILL +    K++DFG A I       S     VGT  +M+PE   
Sbjct: 144 HN---MIHRDIKAGNILLTEPGQVKLADFGSASI------ASPANSFVGTPYWMAPEVIL 194

Query: 651 -AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT 709
              +G +  K DV+S G+  +E   ++R     N N+++ L H   + +++       PT
Sbjct: 195 AMDEGQYDGKVDVWSLGITCIEL--AERKPPLFNMNAMSALYH---IAQNE------SPT 243

Query: 710 LQNEASYLILNRYINVGLLCVQEDAADRPTMFEVV 744
           LQ+         +++    C+Q+   DRPT  E++
Sbjct: 244 LQSNEWSDYFRNFVDS---CLQKIPQDRPTSEELL 275

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 98.1 bits (245), Expect = 1e-22
 Identities = 55/177 (31%), Positives = 92/177 (51%), Gaps = 12/177 (6%)

Query: 482 KLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQG--QEEFKNEIKLIAKLQHRNLVRLLG 538
           ++GEG  G V+K +    G+ VA+K+++ +  +G    +   EIK +   QH  +V+LL 
Sbjct: 7   RIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLD 66

Query: 539 CCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRV 598
                   +L+ EYMP+  L   L D   E  L        +  + +G+ Y+H      +
Sbjct: 67  VFPHGSGFVLVMEYMPS-DLSEVLRDE--ERPLPEAQVKSYMRMLLKGVAYMHA---NGI 120

Query: 599 IHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPE--YAQQ 653
           +HRDLK +N+L+  D   KI+DFG+AR+F  +E +  + + V T  Y +PE  Y  +
Sbjct: 121 MHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQ-VATRWYRAPELLYGAR 176

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 97.8 bits (243), Expect = 2e-22
 Identities = 69/231 (29%), Positives = 113/231 (48%), Gaps = 27/231 (11%)

Query: 476 NFSTENKLGEGGFGPVYKGRLLN---GQE---VAVKRLSSQSGQGQEEFKNEIKLIAKLQ 529
           N   + +LGEG FG V+     N    Q+   VAVK L   S   +++F  E +L+  LQ
Sbjct: 6   NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQ 65

Query: 530 HRNLVRLLGCCIELEEKILIYEYMPNKSLDFFL----------FDSTKENLLGWGTRVRI 579
           H ++V+  G C+E +  I+++EYM +  L+ FL           +  +   L     + I
Sbjct: 66  HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHI 125

Query: 580 IEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRI 639
            + IA G++YL   +    +HRDL   N L+ +++  KI DFGM+R    D   +   R+
Sbjct: 126 AQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSR----DVYSTDYYRV 178

Query: 640 VG----TYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNS 686
            G       +M PE      F+ +SDV+S GV+L E  +  +   +  +N+
Sbjct: 179 GGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN 229

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 97.7 bits (243), Expect = 3e-22
 Identities = 80/285 (28%), Positives = 129/285 (45%), Gaps = 38/285 (13%)

Query: 482 KLGEGGFGPVYKGRLLNGQE---------------VAVKRLSSQ-SGQGQEEFKNEIKLI 525
           KLGEG FG V+        E               VAVK L +  +   + +F  EIK++
Sbjct: 12  KLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIM 71

Query: 526 AKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIE---- 581
           ++L++ N++RLLG C+  +   +I EYM N  L+ FL     E+       +  +     
Sbjct: 72  SRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANL 131

Query: 582 -----GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGDELQSK 635
                 IA G+ YL   + L  +HRDL   N L+      KI+DFGM+R ++ GD  + +
Sbjct: 132 LYMAVQIASGMKYL---ASLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQ 188

Query: 636 TKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWD 695
             R V    +M+ E    G F+  SDV++FGV L E  +  +   +S  +   ++ +  +
Sbjct: 189 -GRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGE 247

Query: 696 LWKDD-RAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPT 739
            +++  R   L    L     + ++ R       C   D  DRPT
Sbjct: 248 FFRNQGRQIYLSQTPLCPSPVFKLMMR-------CWSRDIKDRPT 285

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 97.4 bits (242), Expect = 3e-22
 Identities = 69/203 (33%), Positives = 111/203 (54%), Gaps = 22/203 (10%)

Query: 483 LGEGGFGPVYKGRLLNGQE-----VAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRL 536
           LG G FG VYKG  +   E     VA+K L+  +G +   EF +E  ++A + H +LVRL
Sbjct: 15  LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 74

Query: 537 LGCCIELEEKILIYEYMPNKSLDFFLFDSTKEN-----LLGWGTRVRIIEGIAQGLLYLH 591
           LG C+    + L+ + MP+  L  ++ +  K+N     LL W  +      IA+G++YL 
Sbjct: 75  LGVCLSPTIQ-LVTQLMPHGCLLDYVHEH-KDNIGSQLLLNWCVQ------IAKGMMYLE 126

Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYA 651
           +    R++HRDL A N+L+    + KI+DFG+AR+  GDE +           +M+ E  
Sbjct: 127 ER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 183

Query: 652 QQGLFSIKSDVFSFGVLLLETLS 674
               F+ +SDV+S+GV + E ++
Sbjct: 184 HYRKFTHQSDVWSYGVTIWELMT 206

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 96.5 bits (240), Expect = 4e-22
 Identities = 82/282 (29%), Positives = 136/282 (48%), Gaps = 39/282 (13%)

Query: 480 ENKLGEGGFGPVYKGRL-LNGQE---VAVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNLV 534
           E  +G G FG V +GRL L G+    VA+K L S   + Q  +F +E  ++ +  H N++
Sbjct: 9   EEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNII 68

Query: 535 RLLGCCIELEEKILIYEYMPNKSLDFFLFDS----TKENLLGWGTRVRIIEGIAQGLLYL 590
            L G   +    ++I E+M N +LD FL  +    T   L+G      ++ GIA G+ YL
Sbjct: 69  HLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVG------MLRGIAAGMKYL 122

Query: 591 HQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG---TYGYMS 647
              S +  +HRDL A NIL++ ++  K+SDFG++R    D         +G      + +
Sbjct: 123 ---SEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTA 179

Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLS--SKRNTDFSNTNSLTLLGHAWDLWKDDRAWEL 705
           PE      F+  SDV+S+G+++ E +S   +   D SN + +  +         ++ + L
Sbjct: 180 PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAI---------EQDYRL 230

Query: 706 IDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML 747
             P     A + ++       L C Q+D   RP   ++VS L
Sbjct: 231 PPPMDCPTALHQLM-------LDCWQKDRNARPKFGQIVSTL 265

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 96.5 bits (240), Expect = 6e-22
 Identities = 66/208 (31%), Positives = 108/208 (51%), Gaps = 12/208 (5%)

Query: 466 SLASVSAATANFSTENKLGEGGFGPVYKG-RLLNGQEVAVKRLSSQSGQGQEEFKNEIKL 524
           ++ SV      ++   K+G+G  G VY    +  GQEVA+K+++ Q    +E   NEI +
Sbjct: 10  TIVSVGDPKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILV 69

Query: 525 IAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIA 584
           + + +H N+V  L   +  +E  ++ EY+   SL     D   E  +  G    +     
Sbjct: 70  MRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECL 125

Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGM-ARIFGGDELQSKTKRIVGTY 643
           Q L +LH     +VIHRD+K+ NILL  D + K++DFG  A+I      QSK   +VGT 
Sbjct: 126 QALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQI---TPEQSKRSTMVGTP 179

Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            +M+PE   +  +  K D++S G++ +E
Sbjct: 180 YWMAPEVVTRKAYGPKVDIWSLGIMAIE 207

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 95.4 bits (238), Expect = 9e-22
 Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 26/207 (12%)

Query: 481 NKLGEGGFGPVYK-GRLLNGQEVAVKRLS--SQSGQGQEEFKNEIKLIAKLQHRNLVRLL 537
             +G+G FG V K  R  +G+ +  K +   + + + +++  +E+ ++ +L+H N+VR  
Sbjct: 6   ETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYY 65

Query: 538 GCCIELEEKILIY---EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGI-----AQGLLY 589
              I       +Y   EY     L   +    KE          I E        Q LL 
Sbjct: 66  DR-IIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERK-------YIEEEFIWRILTQLLLA 117

Query: 590 LH-----QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG 644
           L+           V+HRDLK +NI LD + N K+ DFG+A+I G D   S  K  VGT  
Sbjct: 118 LYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHD--SSFAKTYVGTPY 175

Query: 645 YMSPEYAQQGLFSIKSDVFSFGVLLLE 671
           YMSPE      +  KSD++S G L+ E
Sbjct: 176 YMSPEQLNHMSYDEKSDIWSLGCLIYE 202

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|238531 cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins

 Score = 89.4 bits (222), Expect = 1e-21
 Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 10/91 (10%)

Query: 331 QSSDCKSG---DRFIMLDDVKLPDFVEASLNESMNVKECEAECLKNCTCRAYANSKVTGE 387
              +C      D F+ L DVKLPD   AS   +++++EC   CL NC+C AYA +     
Sbjct: 1   TPLNCGGDGSTDGFLKLPDVKLPDN--ASAITAISLEECREACLSNCSCTAYAYNNG--- 55

Query: 388 GSGCLMWFGDLIDIRKADDRNNGQSIYIRVP 418
             GCL+W G L ++R     + G ++Y+R+ 
Sbjct: 56  SGGCLLWNGLLNNLRSLS--SGGGTLYLRLA 84

PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica, one of probably many molecular mechanisms, by which hermaphrodite flowering plants avoid self-fertilization. Length = 84

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 95.2 bits (237), Expect = 1e-21
 Identities = 65/215 (30%), Positives = 112/215 (52%), Gaps = 33/215 (15%)

Query: 483 LGEGGFGPVYKG-RLLNGQEVAVK------RLSSQSGQGQ----EEFKNEIKLIAKLQHR 531
           +G+G +G VY    +  G+ +AVK       ++ +    Q    +  ++EI+ +  L H 
Sbjct: 9   IGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHL 68

Query: 532 NLVRLLGCCIELEEKILIY-EYMPNKSLDFFLFDSTK--ENLLGWGTRVRIIEGIAQGLL 588
           N+V+ LG     EE + I+ EY+P  S+   L    +  E L+ + T       + +GL 
Sbjct: 69  NIVQYLGF-ETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTE-----QVLEGLA 122

Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR----IFGGDELQSKTKRIVGTYG 644
           YLH      ++HRDLKA N+L+D D   KISDFG+++    I+  D+  S    + G+  
Sbjct: 123 YLHSKG---ILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMS----MQGSVF 175

Query: 645 YMSPE--YAQQGLFSIKSDVFSFGVLLLETLSSKR 677
           +M+PE  ++    +S K D++S G ++LE  + +R
Sbjct: 176 WMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRR 210

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 95.5 bits (238), Expect = 1e-21
 Identities = 68/201 (33%), Positives = 104/201 (51%), Gaps = 25/201 (12%)

Query: 482 KLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLG 538
           K+GEG +G VYK R  L G+ VA+K  RL ++          EI L+ +L H N+VRLL 
Sbjct: 6   KIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLD 65

Query: 539 CCIELEEKILIYEYMPNKSLDFFL---FDSTKENLLGWGTRVRIIEG----IAQGLLYLH 591
                 +  L++E+     LD  L    DS+    L       +I+     + QG+ Y H
Sbjct: 66  VVHSENKLYLVFEF-----LDLDLKKYMDSSPLTGLD----PPLIKSYLYQLLQGIAYCH 116

Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYA 651
            +   RV+HRDLK  N+L+D++   K++DFG+AR F G  +++ T  +V T  Y +PE  
Sbjct: 117 SH---RVLHRDLKPQNLLIDREGALKLADFGLARAF-GVPVRTYTHEVV-TLWYRAPEIL 171

Query: 652 QQG-LFSIKSDVFSFGVLLLE 671
                +S   D++S G +  E
Sbjct: 172 LGSRQYSTPVDIWSIGCIFAE 192

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 95.9 bits (238), Expect = 2e-21
 Identities = 78/271 (28%), Positives = 128/271 (47%), Gaps = 33/271 (12%)

Query: 481 NKLGEGGFGPVYKGRLLNGQE-VAVKRLSSQSGQGQEEFKN---EIKLIAKLQHRNLVRL 536
           +++G G FG VY     +  E VAVK++S    Q  E++++   E+K + +L+H N +  
Sbjct: 27  HEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEY 86

Query: 537 LGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRL 596
            GC ++     L+ EY    + D        +  L       I  G  QGL YLH ++  
Sbjct: 87  KGCYLKEHTAWLVMEYCLGSASDLL---EVHKKPLQEVEIAAITHGALQGLAYLHSHNM- 142

Query: 597 RVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEY---AQQ 653
             IHRD+KA NILL +    K++DFG A         S     VGT  +M+PE      +
Sbjct: 143 --IHRDIKAGNILLTEPGQVKLADFGSASK------SSPANSFVGTPYWMAPEVILAMDE 194

Query: 654 GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNE 713
           G +  K DV+S G+  +E   ++R     N N+++ L H   + ++D       PTLQ+ 
Sbjct: 195 GQYDGKVDVWSLGITCIEL--AERKPPLFNMNAMSALYH---IAQND------SPTLQSN 243

Query: 714 ASYLILNRYINVGLLCVQEDAADRPTMFEVV 744
                   +++    C+Q+   +RP   E++
Sbjct: 244 EWTDSFRGFVD---YCLQKIPQERPASAELL 271

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 94.9 bits (236), Expect = 2e-21
 Identities = 67/206 (32%), Positives = 114/206 (55%), Gaps = 13/206 (6%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRN 532
           NF    K+GEG +G VYK R  L G+ VA+K  RL +++         EI L+ +L H N
Sbjct: 1   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 60

Query: 533 LVRLLGCCIELEEKI-LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH 591
           +V+LL   I  E K+ L++E++ ++ L  F+ D++  + +        +  + QGL + H
Sbjct: 61  IVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASPLSGIPLPLIKSYLFQLLQGLAFCH 117

Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPE-Y 650
            +   RV+HRDLK  N+L++ +   K++DFG+AR F G  +++ T  +V T  Y +PE  
Sbjct: 118 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TLWYRAPEIL 172

Query: 651 AQQGLFSIKSDVFSFGVLLLETLSSK 676
                +S   D++S G +  E ++ +
Sbjct: 173 LGCKYYSTAVDIWSLGCIFAEMVTRR 198

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 94.8 bits (236), Expect = 2e-21
 Identities = 70/207 (33%), Positives = 107/207 (51%), Gaps = 14/207 (6%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRN 532
           +++   K+GEG +G VYKGR    GQ VA+K  RL S+          EI L+ +LQH N
Sbjct: 1   DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPN 60

Query: 533 LVRLLGCCIELEEKILIYEYMPNKSLDFFLF-DSTKENLLGWGTRVR-IIEGIAQGLLYL 590
           +V L    ++     LI+E++   S+D   + DS  +        V+  +  I QG+L+ 
Sbjct: 61  IVCLQDVLMQESRLYLIFEFL---SMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFC 117

Query: 591 HQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEY 650
           H     RV+HRDLK  N+L+D     K++DFG+AR F G  ++  T  +V T  Y +PE 
Sbjct: 118 H---SRRVLHRDLKPQNLLIDNKGVIKLADFGLARAF-GIPVRVYTHEVV-TLWYRAPEV 172

Query: 651 AQQG-LFSIKSDVFSFGVLLLETLSSK 676
                 +S   D++S G +  E  + K
Sbjct: 173 LLGSPRYSTPVDIWSIGTIFAEMATKK 199

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 94.1 bits (234), Expect = 2e-21
 Identities = 84/275 (30%), Positives = 133/275 (48%), Gaps = 35/275 (12%)

Query: 483 LGEGGFGPVYKGRLL--NGQEV--AVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNLVRLL 537
           +G+G FG VY G L+  +GQ++  AVK L+  +   + E+F  E  ++    H N++ LL
Sbjct: 3   IGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLL 62

Query: 538 GCCIELE-EKILIYEYMPNKSLDFFLFDSTK----ENLLGWGTRVRIIEGIAQGLLYLHQ 592
           G C+  E   +++  YM +  L  F+   T     ++L+G+G +V      A+G+ YL  
Sbjct: 63  GICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQV------AKGMEYLAS 116

Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY--GYMSPEY 650
               + +HRDL A N +LD+    K++DFG+AR     E  S            +M+ E 
Sbjct: 117 K---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALES 173

Query: 651 AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL 710
            Q   F+ KSDV+SFGVLL E L ++    + + +S  +  +   L +  R   L+ P  
Sbjct: 174 LQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVDSFDITVY---LLQGRR---LLQPEY 226

Query: 711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVS 745
             +  Y        V L C       RPT  E+VS
Sbjct: 227 CPDPLY-------EVMLSCWHPKPEMRPTFSELVS 254

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 94.6 bits (236), Expect = 3e-21
 Identities = 63/219 (28%), Positives = 100/219 (45%), Gaps = 43/219 (19%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKN-----EIKLIAKLQ 529
            +    KLGEG +  VYK R    G+ VA+K++     +  ++  N     EIKL+ +L+
Sbjct: 1   RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELK 60

Query: 530 HRNLVRLLGCCIELEEKILIYEYMP--------NKSLDFFLFDSTKENLLGWGTRVRIIE 581
           H N++ LL          L++E+M         +KS+     D  K            + 
Sbjct: 61  HPNIIGLLDVFGHKSNINLVFEFMETDLEKVIKDKSIVLTPAD-IKS----------YML 109

Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG--GDELQSKTKRI 639
              +GL YLH      ++HRDLK +N+L+  D   K++DFG+AR FG    ++  +    
Sbjct: 110 MTLRGLEYLHSNW---ILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMTHQ---- 162

Query: 640 VGTYGYMSPEYAQQGLFSIKS-----DVFSFGVLLLETL 673
           V T  Y +PE     LF  +      D++S G +  E L
Sbjct: 163 VVTRWYRAPEL----LFGARHYGVGVDMWSVGCIFAELL 197

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 94.1 bits (234), Expect = 4e-21
 Identities = 60/209 (28%), Positives = 97/209 (46%), Gaps = 30/209 (14%)

Query: 547 ILIYEYMPNKSLDFFL--FDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLK 604
            +  E+M   SLD            +LG     +I   + +GL YL  Y+  R++HRD+K
Sbjct: 79  CMCMEFMDCGSLDRIYKKGGPIPVEILG-----KIAVAVVEGLTYL--YNVHRIMHRDIK 131

Query: 605 ASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFS 664
            SNIL++     K+ DFG++    G+ + S     VGT  YMSPE  Q G +++KSDV+S
Sbjct: 132 PSNILVNSRGQIKLCDFGVS----GELINSIADTFVGTSTYMSPERIQGGKYTVKSDVWS 187

Query: 665 FGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYL------- 717
            G+ ++E    K    FSN +          L       +L+   +Q     L       
Sbjct: 188 LGISIIELALGKFPFAFSNIDDDGQDDPMGIL-------DLLQQIVQEPPPRLPSSDFPE 240

Query: 718 ILNRYINVGLLCVQEDAADRPTMFEVVSM 746
            L  +++    C+ +D  +RPT  ++ +M
Sbjct: 241 DLRDFVD---ACLLKDPTERPTPQQLCAM 266

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 93.7 bits (233), Expect = 4e-21
 Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 15/200 (7%)

Query: 483 LGEGGFGPVYKGRLLN-GQEVAVKRLSSQ---SGQGQEEFKNEIKLIAKLQHRNLVRLLG 538
           LG+GGFG V   ++   G+  A K+L  +     +G++   NE K++ K+  R +V L  
Sbjct: 1   LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSL-A 59

Query: 539 CCIELEEKI-LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEG-IAQGLLYLHQYSRL 596
              E ++ + L+   M    L + +++  +        R       I  GL +LHQ    
Sbjct: 60  YAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPE--ARAIFYAAQIICGLEHLHQ---R 114

Query: 597 RVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLF 656
           R+++RDLK  N+LLD   N +ISD G+A    G     K K   GT GYM+PE  Q  ++
Sbjct: 115 RIVYRDLKPENVLLDDHGNVRISDLGLAVELKG---GKKIKGRAGTPGYMAPEVLQGEVY 171

Query: 657 SIKSDVFSFGVLLLETLSSK 676
               D F+ G  L E ++ +
Sbjct: 172 DFSVDWFALGCTLYEMIAGR 191

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 93.1 bits (232), Expect = 5e-21
 Identities = 58/199 (29%), Positives = 102/199 (51%), Gaps = 19/199 (9%)

Query: 481 NKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGC 539
            ++G G +G VYK R +  G+ VA+K +  + G   E  + EI ++ + +H N+V   G 
Sbjct: 9   QRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGS 68

Query: 540 CIELEEKILIYEYMPNKSLDFF---LFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRL 596
            +  ++  ++ EY    SL            E  + +  R  +     +GL YLH+    
Sbjct: 69  YLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETL-----KGLAYLHE---T 120

Query: 597 RVIHRDLKASNILLDKDMNPKISDFGM-ARIFGGDELQSKTKRIVGTYGYMSPEYAQ--- 652
             IHRD+K +NILL +D + K++DFG+ A++       +K K  +GT  +M+PE A    
Sbjct: 121 GKIHRDIKGANILLTEDGDVKLADFGVSAQL---TATIAKRKSFIGTPYWMAPEVAAVER 177

Query: 653 QGLFSIKSDVFSFGVLLLE 671
           +G +  K D+++ G+  +E
Sbjct: 178 KGGYDGKCDIWALGITAIE 196

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 93.1 bits (231), Expect = 8e-21
 Identities = 81/283 (28%), Positives = 135/283 (47%), Gaps = 37/283 (13%)

Query: 482 KLGEGGFGPVYKG---RLLNGQ---EVAVKRLS-SQSGQGQEEFKNEIKLIAKLQHRNLV 534
           +LG+G FG VY+G    ++ G+    VAVK ++ S S + + EF NE  ++      ++V
Sbjct: 13  ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 72

Query: 535 RLLGCCIELEEKILIYEYMPNKSLDFFL--FDSTKENLLG-----WGTRVRIIEGIAQGL 587
           RLLG   + +  +++ E M +  L  +L       EN  G         +++   IA G+
Sbjct: 73  RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 132

Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGDELQSKTKRIVGTYGYM 646
            YL+     + +HRDL A N ++  D   KI DFGM R I+  D  +   K ++     M
Sbjct: 133 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW-M 188

Query: 647 SPEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWE 704
           +PE  + G+F+  SD++SFGV+L E  +L+ +     SN   L  +     L + D   E
Sbjct: 189 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE 248

Query: 705 LIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML 747
            +   ++                +C Q +   RPT  E+V++L
Sbjct: 249 RVTDLMR----------------MCWQFNPKMRPTFLEIVNLL 275

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 93.2 bits (231), Expect = 9e-21
 Identities = 68/226 (30%), Positives = 113/226 (50%), Gaps = 12/226 (5%)

Query: 466 SLASVSAATANFSTENKLGEGGFGPVYKG-RLLNGQEVAVKRLSSQSGQGQEEFKNEIKL 524
           S+ SV      ++   K+G+G  G VY    +  GQEVA+K+++ Q    +E   NEI +
Sbjct: 10  SIVSVGDPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILV 69

Query: 525 IAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIA 584
           + + ++ N+V  L   +  +E  ++ EY+   SL     D   E  +  G    +     
Sbjct: 70  MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECL 125

Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG 644
           Q L +LH     +VIHRD+K+ NILL  D + K++DFG       +  QSK   +VGT  
Sbjct: 126 QALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE--QSKRSTMVGTPY 180

Query: 645 YMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +M+PE   +  +  K D++S G++ +E +  +    + N N L  L
Sbjct: 181 WMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE--PPYLNENPLRAL 224

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 93.2 bits (231), Expect = 9e-21
 Identities = 67/226 (29%), Positives = 113/226 (50%), Gaps = 12/226 (5%)

Query: 466 SLASVSAATANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKL 524
           S+ SV      ++   K+G+G  G VY    +  GQEVA+++++ Q    +E   NEI +
Sbjct: 11  SIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILV 70

Query: 525 IAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIA 584
           + + ++ N+V  L   +  +E  ++ EY+   SL     D   E  +  G    +     
Sbjct: 71  MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECL 126

Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG 644
           Q L +LH     +VIHRD+K+ NILL  D + K++DFG       +  QSK   +VGT  
Sbjct: 127 QALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE--QSKRSTMVGTPY 181

Query: 645 YMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +M+PE   +  +  K D++S G++ +E +  +    + N N L  L
Sbjct: 182 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE--PPYLNENPLRAL 225

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 93.1 bits (231), Expect = 1e-20
 Identities = 66/227 (29%), Positives = 107/227 (47%), Gaps = 31/227 (13%)

Query: 476 NFSTENKLGEGGFGPVYKGRL--LNGQ----EVAVKRLSSQSGQGQ-EEFKNEIKLIAKL 528
           N      LGEG FG V K     L G+     VAVK L   +   +  +  +E  L+ ++
Sbjct: 1   NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQV 60

Query: 529 QHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTK--------------------- 567
            H ++++L G C +    +LI EY    SL  FL +S K                     
Sbjct: 61  NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPD 120

Query: 568 ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF 627
           E  L  G  +     I++G+ YL   + ++++HRDL A N+L+ +    KISDFG++R  
Sbjct: 121 ERALTMGDLISFAWQISRGMQYL---AEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDV 177

Query: 628 GGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             ++   K  +      +M+ E     +++ +SDV+SFGVLL E ++
Sbjct: 178 YEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 224

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 93.1 bits (232), Expect = 1e-20
 Identities = 55/197 (27%), Positives = 87/197 (44%), Gaps = 35/197 (17%)

Query: 471 SAATANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFK----NEIKLI 525
            +   ++    KLGEG FG VYK R +  G+ VA+K++   + +  + F      EIK++
Sbjct: 4   CSKLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEK--DGFPITALREIKIL 61

Query: 526 AKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLD-------FFLFDSTKENLLGWGTRVR 578
            KL+H N+V L+          +  E                   D     LL     V+
Sbjct: 62  KKLKHPNVVPLID---------MAVERPDKSKRKRGSVYMVTPYMDHDLSGLLE-NPSVK 111

Query: 579 --------IIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD 630
                    +  + +G+ YLH+     ++HRD+KA+NIL+D     KI+DFG+AR + G 
Sbjct: 112 LTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADFGLARPYDGP 168

Query: 631 ELQSKTKRIVGTYGYMS 647
               K     GT  Y +
Sbjct: 169 PPNPKGGGGGGTRKYTN 185

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 92.0 bits (229), Expect = 2e-20
 Identities = 61/199 (30%), Positives = 100/199 (50%), Gaps = 16/199 (8%)

Query: 482 KLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKN--EIKLIAKLQHRNLVRLLG 538
           K+GEG +G VYK R  L G+ VA+K++  +            EIKL+ +L H N+++LL 
Sbjct: 6   KIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLD 65

Query: 539 CCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWG-TRVR-IIEGIAQGLLYLHQYSRL 596
                 +  L++E+M     D  L+   K+   G   + ++  +  + QGL + H +   
Sbjct: 66  VFRHKGDLYLVFEFM-----DTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSH--- 117

Query: 597 RVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPE-YAQQGL 655
            ++HRDLK  N+L++ +   K++DFG+AR FG           V T  Y +PE       
Sbjct: 118 GILHRDLKPENLLINTEGVLKLADFGLARSFGSP--VRPYTHYVVTRWYRAPELLLGDKG 175

Query: 656 FSIKSDVFSFGVLLLETLS 674
           +S   D++S G +  E LS
Sbjct: 176 YSTPVDIWSVGCIFAELLS 194

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 90.9 bits (226), Expect = 4e-20
 Identities = 65/202 (32%), Positives = 100/202 (49%), Gaps = 21/202 (10%)

Query: 485 EGGFGPVYKGRLLNG-----QEVAVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNLVRLLG 538
           EG FG ++ G L++      +EV VK +   + + Q      E  L+  L H+N++ +L 
Sbjct: 16  EGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILH 75

Query: 539 CCIELEEK-ILIYEYMPNKSLDFFLFD---STKENLLGWGTR--VRIIEGIAQGLLYLHQ 592
            CIE  E   ++Y YM   +L  FL         N     T+  V +   IA G+ YLH 
Sbjct: 76  VCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLH- 134

Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGDE--LQSKTKRIVGTYGYMSPE 649
             +  VIH+D+ A N ++D+++  KI+D  ++R +F  D   L     R V    +M+ E
Sbjct: 135 --KRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPV---KWMALE 189

Query: 650 YAQQGLFSIKSDVFSFGVLLLE 671
                 +S  SDV+SFGVLL E
Sbjct: 190 SLVNKEYSSASDVWSFGVLLWE 211

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 90.8 bits (226), Expect = 5e-20
 Identities = 63/203 (31%), Positives = 108/203 (53%), Gaps = 21/203 (10%)

Query: 481 NKLGEGGFGPVYKGR-LLNGQEVAVKRLS---SQSGQGQEEFKNEIKLIAKLQ---HRNL 533
            ++GEG +G VYK R L  G+ VA+K++    S+ G      + EI L+ +L+   H N+
Sbjct: 5   AEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLR-EIALLKQLESFEHPNI 63

Query: 534 VRLLGCC--IELEEKI---LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLL 588
           VRLL  C     + ++   L++E++ ++ L  +L     +  L   T   ++  + +G+ 
Sbjct: 64  VRLLDVCHGPRTDRELKLTLVFEHV-DQDLATYL-SKCPKPGLPPETIKDLMRQLLRGVD 121

Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSP 648
           +LH +   R++HRDLK  NIL+  D   KI+DFG+ARI+     +     +V T  Y +P
Sbjct: 122 FLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLARIYS---FEMALTSVVVTLWYRAP 175

Query: 649 EYAQQGLFSIKSDVFSFGVLLLE 671
           E   Q  ++   D++S G +  E
Sbjct: 176 EVLLQSSYATPVDMWSVGCIFAE 198

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 90.1 bits (224), Expect = 5e-20
 Identities = 69/211 (32%), Positives = 109/211 (51%), Gaps = 26/211 (12%)

Query: 481 NKLGEGGFGPVYKGRLLNGQEV-AVKRLSSQSGQGQ--EEFKNEIKLIAKLQHRNLVRLL 537
           NK+G G FG VY    L+  E+ AVK +  Q    +  +E  +E+K++  L+H NLV+  
Sbjct: 6   NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYY 65

Query: 538 GCCIELE-EKILIY-EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSR 595
           G  +E+  EK+ I+ EY    +L+  L      +      RV  ++ + +GL YLH +  
Sbjct: 66  G--VEVHREKVYIFMEYCSGGTLEELLEHGRILDEHV--IRVYTLQ-LLEGLAYLHSH-- 118

Query: 596 LRVIHRDLKASNILLDKDMNPKISDFGMARIFG------GDELQSKTKRIVGTYGYMSPE 649
             ++HRD+K +NI LD +   K+ DFG A          G+E+QS    + GT  YM+PE
Sbjct: 119 -GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQS----LAGTPAYMAPE 173

Query: 650 YAQQGLFSIK---SDVFSFGVLLLETLSSKR 677
               G        +D++S G ++LE  + KR
Sbjct: 174 VITGGKGKGHGRAADIWSLGCVVLEMATGKR 204

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 90.0 bits (223), Expect = 5e-20
 Identities = 66/196 (33%), Positives = 103/196 (52%), Gaps = 13/196 (6%)

Query: 483 LGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIE 542
           +G+G FG V  G    G +VAVK + + +    + F  E  ++ +L+H NLV+LLG  +E
Sbjct: 14  IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 70

Query: 543 LEEKILIY-EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHR 601
            +  + I  EYM   SL  +L  S   ++LG    ++    + + + YL   +    +HR
Sbjct: 71  EKGGLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEANN---FVHR 126

Query: 602 DLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSD 661
           DL A N+L+ +D   K+SDFG+ +       Q   K  V    + +PE  ++  FS KSD
Sbjct: 127 DLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKLPVK---WTAPEALREKKFSTKSD 181

Query: 662 VFSFGVLLLETLSSKR 677
           V+SFG+LL E  S  R
Sbjct: 182 VWSFGILLWEIYSFGR 197

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 90.1 bits (223), Expect = 7e-20
 Identities = 62/206 (30%), Positives = 101/206 (49%), Gaps = 18/206 (8%)

Query: 475 ANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLS---SQSGQGQEEFKNEIKLIAKLQH 530
           ANF  E K+G G F  VY+   LL+ + VA+K++        + +++   EI L+ +L H
Sbjct: 2   ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNH 61

Query: 531 RNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLL-----GWGTRVRIIEGIAQ 585
            N+++ L   IE  E  ++ E      L   +    K+  L      W   V++   +  
Sbjct: 62  PNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVE- 120

Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
                H +SR RV+HRD+K +N+ +      K+ D G+ R F      + +  +VGT  Y
Sbjct: 121 -----HMHSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGTPYY 172

Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLE 671
           MSPE   +  ++ KSD++S G LL E
Sbjct: 173 MSPERIHENGYNFKSDIWSLGCLLYE 198

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 90.4 bits (224), Expect = 7e-20
 Identities = 71/204 (34%), Positives = 103/204 (50%), Gaps = 20/204 (9%)

Query: 483 LGEGGFGPV----YKGRLLN-GQEVAVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNLVRL 536
           LGEG FG V    Y     N G++VAVK L  +SG     + K EI+++  L H N+V+ 
Sbjct: 12  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 71

Query: 537 LGCCIELEEK--ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYL--HQ 592
            G C E       LI E++P+ SL  +L     +N +    +++    I +G+ YL   Q
Sbjct: 72  KGICTEDGGNGIKLIMEFLPSGSLKEYL--PRNKNKINLKQQLKYAVQICKGMDYLGSRQ 129

Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE--LQSKTKRIVGTYGYMSPEY 650
           Y     +HRDL A N+L++ +   KI DFG+ +    D+     K       + Y +PE 
Sbjct: 130 Y-----VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWY-APEC 183

Query: 651 AQQGLFSIKSDVFSFGVLLLETLS 674
             Q  F I SDV+SFGV L E L+
Sbjct: 184 LIQSKFYIASDVWSFGVTLYELLT 207

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 90.6 bits (224), Expect = 7e-20
 Identities = 78/285 (27%), Positives = 134/285 (47%), Gaps = 33/285 (11%)

Query: 466 SLASVSAATANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKL 524
           ++ S+      ++   K+G+G  G V+    +  GQEVA+K+++ Q    +E   NEI +
Sbjct: 10  TIVSIGDPKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILV 69

Query: 525 IAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIA 584
           + +L++ N+V  L   +  +E  ++ EY+   SL     D   E  +       +     
Sbjct: 70  MKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLT----DVVTETCMDEAQIAAVCRECL 125

Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG 644
           Q L +LH     +VIHRD+K+ N+LL  D + K++DFG       +  QSK   +VGT  
Sbjct: 126 QALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPE--QSKRSTMVGTPY 180

Query: 645 YMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWE 704
           +M+PE   +  +  K D++S G++ +E +  +    + N N L             RA  
Sbjct: 181 WMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE--PPYLNENPL-------------RALY 225

Query: 705 LI----DPTLQN-EASYLILNRYINVGLLCVQEDAADRPTMFEVV 744
           LI     P LQN E    I   ++N    C++ D   R +  E++
Sbjct: 226 LIATNGTPELQNPEKLSPIFRDFLN---RCLEMDVEKRGSAKELL 267

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 89.3 bits (221), Expect = 8e-20
 Identities = 66/198 (33%), Positives = 103/198 (52%), Gaps = 13/198 (6%)

Query: 482 KLGEGGFGPVYKGRL-LNGQEVAVKRL-SSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGC 539
           ++G G FG V+ GRL  +   VAVK    +     + +F  E +++ +  H N+VRL+G 
Sbjct: 2   RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 61

Query: 540 CIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
           C + +   ++ E +  +  DF  F  T+   L     ++++E  A G+ YL        I
Sbjct: 62  CTQKQPIYIVMELV--QGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKH---CI 116

Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKT---KRIVGTYGYMSPEYAQQGLF 656
           HRDL A N L+ +    KISDFGM+R    D + + T   K+I     + +PE    G +
Sbjct: 117 HRDLAARNCLVTEKNVLKISDFGMSRE-EEDGVYASTGGMKQI--PVKWTAPEALNYGRY 173

Query: 657 SIKSDVFSFGVLLLETLS 674
           S +SDV+SFG+LL E  S
Sbjct: 174 SSESDVWSFGILLWEAFS 191

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 89.9 bits (223), Expect = 9e-20
 Identities = 69/205 (33%), Positives = 104/205 (50%), Gaps = 22/205 (10%)

Query: 483 LGEGGFGPVY------KGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRL 536
           LG+GGFG V        G+L   +++  KRL  +  +G E    E +++AK+  R +V L
Sbjct: 1   LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKR--KGYEGAMVEKRILAKVHSRFIVSL 58

Query: 537 LGCCIELEEKI-LIYEYMPNKSLDFFLFDSTKENLLGWGTR-VRIIEGIAQGLLYLHQYS 594
                + +  + L+   M    L + +++  +EN      R       I  GL +LHQ  
Sbjct: 59  -AYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR- 116

Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL---QSKTKRIVGTYGYMSPEYA 651
             R+I+RDLK  N+LLD D N +ISD G+A      EL   QSKTK   GT G+M+PE  
Sbjct: 117 --RIIYRDLKPENVLLDNDGNVRISDLGLAV-----ELKDGQSKTKGYAGTPGFMAPELL 169

Query: 652 QQGLFSIKSDVFSFGVLLLETLSSK 676
           Q   +    D F+ GV L E ++++
Sbjct: 170 QGEEYDFSVDYFALGVTLYEMIAAR 194

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 89.7 bits (222), Expect = 1e-19
 Identities = 78/282 (27%), Positives = 134/282 (47%), Gaps = 39/282 (13%)

Query: 482 KLGEGGFGPVYKGRLLNG-------QEVAVKRLS-SQSGQGQEEFKNEIKLIAKLQHRNL 533
           +LG+G FG VY+G +  G         VA+K ++ + S + + EF NE  ++ +    ++
Sbjct: 13  ELGQGSFGMVYEG-IAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 71

Query: 534 VRLLGCCIELEEKILIYEYMPNKSLDFFLF-------DSTKENLLGWGTRVRIIEGIAQG 586
           VRLLG   + +  ++I E M    L  +L        ++  +        +++   IA G
Sbjct: 72  VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADG 131

Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGDELQSKTKRIVGTYGY 645
           + YL+     + +HRDL A N ++ +D   KI DFGM R I+  D  +   K ++    +
Sbjct: 132 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-W 187

Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAW 703
           MSPE  + G+F+  SDV+SFGV+L E  TL+ +     SN   L  +     L K D   
Sbjct: 188 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLLDKPDNCP 247

Query: 704 ELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVS 745
           +++   ++                +C Q +   RP+  E++S
Sbjct: 248 DMLFELMR----------------MCWQYNPKMRPSFLEIIS 273

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 89.7 bits (222), Expect = 1e-19
 Identities = 60/191 (31%), Positives = 98/191 (51%), Gaps = 10/191 (5%)

Query: 482 KLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCC 540
           K+GEG  G V   R   +G++VAVK +  +  Q +E   NE+ ++   QH+N+V +    
Sbjct: 28  KIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSY 87

Query: 541 IELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIH 600
           +  EE  ++ E++   +L     D   +  L       + E + Q L YLH      VIH
Sbjct: 88  LVGEELWVLMEFLQGGALT----DIVSQTRLNEEQIATVCESVLQALCYLHSQG---VIH 140

Query: 601 RDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKS 660
           RD+K+ +ILL  D   K+SDFG       D    K K +VGT  +M+PE   +  +  + 
Sbjct: 141 RDIKSDSILLTLDGRVKLSDFGFCAQISKD--VPKRKSLVGTPYWMAPEVISRTPYGTEV 198

Query: 661 DVFSFGVLLLE 671
           D++S G++++E
Sbjct: 199 DIWSLGIMVIE 209

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 88.9 bits (220), Expect = 2e-19
 Identities = 63/199 (31%), Positives = 108/199 (54%), Gaps = 13/199 (6%)

Query: 482 KLGEGGFGPVYKG--RLLNGQ-EVAVKRLSSQSGQG-QEEFKNEIKLIAKLQHRNLVRLL 537
           +LG G FG V KG  ++   Q +VA+K L +++ +  ++E   E +++ +L +  +VR++
Sbjct: 2   ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMI 61

Query: 538 GCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLR 597
           G C E E  +L+ E      L+ FL  S K++ +     V ++  ++ G+ YL   +   
Sbjct: 62  GVC-EAEALMLVMEMASGGPLNKFL--SGKKDEITVSNVVELMHQVSMGMKYLEGKN--- 115

Query: 598 VIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY--GYMSPEYAQQGL 655
            +HRDL A N+LL      KISDFG+++  G D+   K  R  G +   + +PE      
Sbjct: 116 FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKA-RSAGKWPLKWYAPECINFRK 174

Query: 656 FSIKSDVFSFGVLLLETLS 674
           FS +SDV+S+G+ + E  S
Sbjct: 175 FSSRSDVWSYGITMWEAFS 193

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 90.1 bits (223), Expect = 2e-19
 Identities = 65/212 (30%), Positives = 108/212 (50%), Gaps = 28/212 (13%)

Query: 477 FSTENKLGEGGFGPVYKGRLLNGQE-----VAVKRL-SSQSGQGQEEFKNEIKLIAKLQH 530
           F     LG G FG VYKG  +   E     VA+K L  + S +  +E  +E  ++A + +
Sbjct: 9   FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 68

Query: 531 RNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKEN--------LLGWGTRVRIIEG 582
            ++ RLLG C+    + LI + MP   L     D  +E+        LL W  +      
Sbjct: 69  PHVCRLLGICLTSTVQ-LITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQ------ 117

Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           IA+G+ YL +    R++HRDL A N+L+    + KI+DFG+A++ G DE +   +     
Sbjct: 118 IAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVP 174

Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+ E     +++ +SDV+S+GV + E ++
Sbjct: 175 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 206

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 88.9 bits (221), Expect = 2e-19
 Identities = 65/211 (30%), Positives = 96/211 (45%), Gaps = 36/211 (17%)

Query: 483 LGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKL-QHRNLVRLLGCC 540
           +GEG +G VYK R    GQ VA+K +       +EE K E  ++ K   H N+    G  
Sbjct: 14  IGEGTYGKVYKARHKKTGQLVAIKIMDII-EDEEEEIKEEYNILRKYSNHPNIATFYGAF 72

Query: 541 IELEEKI------LIYEYMPNKSLDFFLFDSTKENLLGWGTRVR------IIEGIAQGLL 588
           I+           L+ E     S+     D  K  L   G R++      I+    +GL 
Sbjct: 73  IKKNPPGNDDQLWLVMELCGGGSVT----DLVK-GLRKKGKRLKEEWIAYILRETLRGLA 127

Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKR---IVGTYGY 645
           YLH+    +VIHRD+K  NILL K+   K+ DFG++      +L S   R    +GT  +
Sbjct: 128 YLHEN---KVIHRDIKGQNILLTKNAEVKLVDFGVSA-----QLDSTLGRRNTFIGTPYW 179

Query: 646 MSPE-----YAQQGLFSIKSDVFSFGVLLLE 671
           M+PE           +  +SDV+S G+  +E
Sbjct: 180 MAPEVIACDEQPDASYDARSDVWSLGITAIE 210

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 89.0 bits (221), Expect = 2e-19
 Identities = 63/196 (32%), Positives = 99/196 (50%), Gaps = 15/196 (7%)

Query: 483 LGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCI 541
           LG+G FG VYK +    G   A K +  +S +  E+F  EI ++++ +H N+V L     
Sbjct: 13  LGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYF 72

Query: 542 ELEEKILIY-EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIH 600
             E K+ I  E+    +LD  +    +  L     R  +   + + L +LH +   +VIH
Sbjct: 73  -YENKLWILIEFCDGGALDS-IMLELERGLTEPQIRY-VCRQMLEALNFLHSH---KVIH 126

Query: 601 RDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFS--- 657
           RDLKA NILL  D + K++DFG++       LQ K    +GT  +M+PE      F    
Sbjct: 127 RDLKAGNILLTLDGDVKLADFGVSAK-NKSTLQ-KRDTFIGTPYWMAPEVVACETFKDNP 184

Query: 658 --IKSDVFSFGVLLLE 671
              K+D++S G+ L+E
Sbjct: 185 YDYKADIWSLGITLIE 200

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 87.8 bits (217), Expect = 4e-19
 Identities = 68/214 (31%), Positives = 103/214 (48%), Gaps = 37/214 (17%)

Query: 483 LGEGGFGPVY------KGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRL 536
           LG+G FG VY       GR L  ++V     S ++ +     + EI+L+  LQH  +V+ 
Sbjct: 10  LGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQY 69

Query: 537 LGCCIELEEKIL--IYEYMPNKSLDFFLFDSTKENLLGWG------TRVRIIEGIAQGLL 588
            GC  +  EK L    EYMP  S+        K+ L  +G      TR +    I +G+ 
Sbjct: 70  YGCLRDRAEKTLTIFMEYMPGGSV--------KDQLKAYGALTESVTR-KYTRQILEGMS 120

Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ------SKTKRIVGT 642
           YLH      ++HRD+K +NIL D   N K+ DFG ++      LQ      +  + + GT
Sbjct: 121 YLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASK-----RLQTICMSGTGIRSVTGT 172

Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
             +MSPE      +  K+DV+S G  ++E L+ K
Sbjct: 173 PYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEK 206

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 87.8 bits (217), Expect = 4e-19
 Identities = 70/209 (33%), Positives = 101/209 (48%), Gaps = 27/209 (12%)

Query: 483 LGEGGFGPVY------KGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRL 536
           LG G FG VY       GR L  ++V     S ++ +     + EI+L+  L+H  +V+ 
Sbjct: 10  LGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQY 69

Query: 537 LGCCIELEEKIL--IYEYMPNKSLDFFLFDSTKENLLGWG------TRVRIIEGIAQGLL 588
            GC  + EEK L    EYMP  S+        K+ L  +G      TR R    I QG+ 
Sbjct: 70  YGCLRDPEEKKLSIFVEYMPGGSI--------KDQLKAYGALTENVTR-RYTRQILQGVS 120

Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMA-RIFGGDELQSKTKRIVGTYGYMS 647
           YLH      ++HRD+K +NIL D   N K+ DFG + RI       +  K + GT  +MS
Sbjct: 121 YLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMS 177

Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           PE      +  K+DV+S    ++E L+ K
Sbjct: 178 PEVISGEGYGRKADVWSVACTVVEMLTEK 206

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 87.8 bits (217), Expect = 4e-19
 Identities = 61/198 (30%), Positives = 105/198 (53%), Gaps = 13/198 (6%)

Query: 477 FSTENKLGEGGFGPVYKGRLLNGQEV-AVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNLV 534
           F+   ++G+G FG VYKG     +EV A+K +  +  + + E+ + EI ++++     + 
Sbjct: 6   FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 65

Query: 535 RLLGCCIELEEKILIYEYMPNKS-LDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY 593
           R  G  ++  +  +I EY+   S LD       +E  +       I+  I +GL YLH  
Sbjct: 66  RYYGSYLKGTKLWIIMEYLGGGSALDLLKPGPLEETYIA-----TILREILKGLDYLHSE 120

Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQ 653
              R IHRD+KA+N+LL +  + K++DFG+A      + Q K    VGT  +M+PE  +Q
Sbjct: 121 ---RKIHRDIKAANVLLSEQGDVKLADFGVAGQL--TDTQIKRNTFVGTPFWMAPEVIKQ 175

Query: 654 GLFSIKSDVFSFGVLLLE 671
             +  K+D++S G+  +E
Sbjct: 176 SAYDFKADIWSLGITAIE 193

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 87.4 bits (216), Expect = 6e-19
 Identities = 79/284 (27%), Positives = 125/284 (44%), Gaps = 36/284 (12%)

Query: 475 ANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSS---QSGQGQEEFKNEIKLIAKLQH 530
           ANF  E K+G G F  VY+   LL+G  VA+K++        + + +   EI L+ +L H
Sbjct: 2   ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 61

Query: 531 RNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLL-----GWGTRVRIIEGIAQ 585
            N+++     IE  E  ++ E      L   +    K+  L      W   V++   +  
Sbjct: 62  PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALE- 120

Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
                H +SR RV+HRD+K +N+ +      K+ D G+ R F      + +  +VGT  Y
Sbjct: 121 -----HMHSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGTPYY 172

Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAW 703
           MSPE   +  ++ KSD++S G LL E   L S    D  N  SL             +  
Sbjct: 173 MSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLC------------KKI 220

Query: 704 ELID-PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM 746
           E  D P L ++     L + +N   +C+  D   RP +  V  +
Sbjct: 221 EQCDYPPLPSDHYSEELRQLVN---MCINPDPEKRPDITYVYDV 261

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 87.8 bits (217), Expect = 6e-19
 Identities = 69/227 (30%), Positives = 117/227 (51%), Gaps = 22/227 (9%)

Query: 482 KLGEGGFGPVYKGRLLN--GQEVAVKRLSSQSGQGQEEFKN--EIKLIAKLQ---HRNLV 534
           ++GEG +G V+K R L   G+ VA+KR+  Q+G+         E+ ++  L+   H N+V
Sbjct: 8   EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 67

Query: 535 RLLGCCI----ELEEKI-LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLY 589
           RL   C     + E K+ L++E++ ++ L  +L D   E  +   T   ++  + +GL +
Sbjct: 68  RLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMMFQLLRGLDF 125

Query: 590 LHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPE 649
           LH +   RV+HRDLK  NIL+      K++DFG+ARI+     Q     +V T  Y +PE
Sbjct: 126 LHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVTLWYRAPE 179

Query: 650 YAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDL 696
              Q  ++   D++S G +  E    +R   F  ++ +  LG   D+
Sbjct: 180 VLLQSSYATPVDLWSVGCIFAEMF--RRKPLFRGSSDVDQLGKILDV 224

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 87.1 bits (216), Expect = 1e-18
 Identities = 64/215 (29%), Positives = 98/215 (45%), Gaps = 28/215 (13%)

Query: 483 LGEGGFGPVYKGRLL------NGQEVAVKRL-SSQSGQGQEEFKNEI---KLIAKLQHRN 532
           LGEG FG V K   +          VAVK L    + +   +  +E+   K+I K  H+N
Sbjct: 20  LGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK--HKN 77

Query: 533 LVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEG---------- 582
           ++ LLG C +     ++ EY  + +L  FL               R  E           
Sbjct: 78  IINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSF 137

Query: 583 ---IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRI 639
              +A+G+ +L      + IHRDL A N+L+ +D   KI+DFG+AR     +   KT   
Sbjct: 138 AYQVARGMEFLASK---KCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNG 194

Query: 640 VGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
                +M+PE     +++ +SDV+SFGVLL E  +
Sbjct: 195 RLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFT 229

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 86.8 bits (215), Expect = 1e-18
 Identities = 58/157 (36%), Positives = 86/157 (54%), Gaps = 10/157 (6%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRN 532
           NF    KLGEG +  VYKGR    G+ VA+K   L ++ G      + EI L+ +L+H N
Sbjct: 1   NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIR-EISLMKELKHEN 59

Query: 533 LVRLLGCCIELEEKI-LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH 591
           +VRL    I  E K+ L++EYM +K L  ++        L   T       + +G+ + H
Sbjct: 60  IVRLHDV-IHTENKLMLVFEYM-DKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCH 117

Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG 628
           +    RV+HRDLK  N+L++K    K++DFG+AR FG
Sbjct: 118 EN---RVLHRDLKPQNLLINKRGELKLADFGLARAFG 151

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 86.1 bits (213), Expect = 1e-18
 Identities = 78/283 (27%), Positives = 126/283 (44%), Gaps = 30/283 (10%)

Query: 481 NKLGEGGFGPVYKG---RLLNGQEVAVKRL-SSQSGQGQEEFKNEIKLIAKLQHRNLVRL 536
           +++G G FG V  G   R ++   V VK L +S +   Q  F  E++   +L H N+++ 
Sbjct: 1   DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQC 60

Query: 537 LGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWG---TRVRIIEGIAQGLLYLHQY 593
           LG CIE    +L+ E+ P   L  +L  S +  +          R+   +A GLL+LHQ 
Sbjct: 61  LGQCIESIPYLLVLEFCPLGDLKNYL-RSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ- 118

Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMARI-FGGDELQSKTKRIVGTYGYMSPEYA- 651
                IH DL   N  L  D++ KI D+G+A   +  D   +K    V    +++PE   
Sbjct: 119 --ADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAV-PLRWLAPELVE 175

Query: 652 --QQGLFSIK----SDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWEL 705
              Q L        S+++S GV + E L +  +  + + +   +L         ++  +L
Sbjct: 176 IRGQDLLPKDQTKKSNIWSLGVTMWE-LFTAADQPYPDLSDEQVLKQV----VREQDIKL 230

Query: 706 IDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT 748
             P L  + S    +R+  V   C   D   RPT  EV  +LT
Sbjct: 231 PKPQLDLKYS----DRWYEVMQFCWL-DPETRPTAEEVHELLT 268

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 85.8 bits (212), Expect = 1e-18
 Identities = 68/206 (33%), Positives = 108/206 (52%), Gaps = 27/206 (13%)

Query: 482 KLGEGGFGPVYKG--RLLNGQE-VAVKRLSSQSGQG--QEEFKNEIKLIAKLQHRNLVRL 536
           +LG G FG V KG  ++   ++ VAVK L + +     ++E   E  ++ +L +  +VR+
Sbjct: 2   ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRM 61

Query: 537 LGCCIELEEKILIYEYMPNKSLDFFLFDS---TKENLLGWGTRVRIIEGIAQGLLYLHQY 593
           +G C E E  +L+ E      L+ FL  +   T++N+        ++  ++ G+ YL + 
Sbjct: 62  IGIC-EAESWMLVMELAELGPLNKFLQKNKHVTEKNI------TELVHQVSMGMKYLEET 114

Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG-----YMSP 648
           +    +HRDL A N+LL      KISDFG+++  G DE   K K    T+G     + +P
Sbjct: 115 N---FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAK----THGKWPVKWYAP 167

Query: 649 EYAQQGLFSIKSDVFSFGVLLLETLS 674
           E      FS KSDV+SFGVL+ E  S
Sbjct: 168 ECMNYYKFSSKSDVWSFGVLMWEAFS 193

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 85.9 bits (212), Expect = 2e-18
 Identities = 64/205 (31%), Positives = 108/205 (52%), Gaps = 21/205 (10%)

Query: 483 LGEGGFGPVYKGRLLNGQ---EVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLL 537
           LGEG FG V +G+L       +VAVK  +++  +    E+F +E   + +  H N++RL+
Sbjct: 7   LGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLI 66

Query: 538 GCCIELEEK------ILIYEYMPNKSLDFFLFDS---TKENLLGWGTRVRIIEGIAQGLL 588
           G C++  E       ++I  +M +  L  FL  S        L     V+ +  IA G+ 
Sbjct: 67  GVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGME 126

Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMA-RIFGGDEL-QSKTKRIVGTYGYM 646
           YL   S    IHRDL A N +L+++MN  ++DFG++ +I+ GD   Q +  ++     ++
Sbjct: 127 YL---SSKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKM--PVKWI 181

Query: 647 SPEYAQQGLFSIKSDVFSFGVLLLE 671
           + E     +++ KSDV+SFGV + E
Sbjct: 182 AIESLADRVYTTKSDVWSFGVTMWE 206

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 85.7 bits (212), Expect = 2e-18
 Identities = 64/208 (30%), Positives = 107/208 (51%), Gaps = 20/208 (9%)

Query: 481 NKLGEGGFGPVYKGRLLNGQEVAVKRL---SSQSGQGQEEFKN---EIKLIAKLQHRNLV 534
             LG+G +G VY G    GQ +AVK++   +S     ++E++    E+ L+  L+H N+V
Sbjct: 6   EVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIV 65

Query: 535 RLLGCCIELEEKILIYEYMPNKSLDFFL--FDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
           + LG C++     +  E++P  S+   L  F    E +    T+ +I++G+A    YLH 
Sbjct: 66  QYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTK-QILDGVA----YLHN 120

Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMAR---IFGGDELQSKT-KRIVGTYGYMSP 648
                V+HRD+K +N++L  +   K+ DFG AR     G     S   K + GT  +M+P
Sbjct: 121 NC---VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAP 177

Query: 649 EYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           E   +  +  KSD++S G  + E  + K
Sbjct: 178 EVINESGYGRKSDIWSIGCTVFEMATGK 205

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 85.5 bits (211), Expect = 2e-18
 Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 27/209 (12%)

Query: 483 LGEGGFGPVYKGRLLN-GQEVAVKRL-----SSQSGQGQEEFKNEIKLIAKLQHRNLVRL 536
           LG+G FG VY     + G+E+AVK++     S ++ +     + EI+L+  L H  +V+ 
Sbjct: 10  LGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQY 69

Query: 537 LGCCIELEEKIL--IYEYMPNKSLDFFLFDSTKENLLGWG------TRVRIIEGIAQGLL 588
            GC  +  E+ L    E+MP  S+        K+ L  +G      TR +    I +G+ 
Sbjct: 70  YGCLRDPMERTLSIFMEHMPGGSI--------KDQLKSYGALTENVTR-KYTRQILEGVS 120

Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ-SKTKRIVGTYGYMS 647
           YLH      ++HRD+K +NIL D   N K+ DFG ++      L  +  K + GT  +MS
Sbjct: 121 YLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMS 177

Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           PE      +  K+D++S G  ++E L+ K
Sbjct: 178 PEVISGEGYGRKADIWSVGCTVVEMLTEK 206

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 84.6 bits (209), Expect = 3e-18
 Identities = 65/225 (28%), Positives = 109/225 (48%), Gaps = 24/225 (10%)

Query: 476 NFSTENKLGEGGFGPVY--KGRLLNGQEVAVK-RLSSQSGQGQEEFKNEIKLIAKLQHRN 532
            +    K+GEG FG +Y  K +  +   V  +  L+    + +E  K E+ L+AK++H N
Sbjct: 1   RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPN 60

Query: 533 LVRLLGCCIELEEKILIYEYMPNKSL-------DFFLFDSTKENLLGWGTRVRIIEGIAQ 585
           +V       E     ++ EY     L          LF  +++ +L W  +      I+ 
Sbjct: 61  IVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLF--SEDQILSWFVQ------ISL 112

Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKD-MNPKISDFGMARIFGGDELQSKTKRIVGTYG 644
           GL ++H     +++HRD+K+ NI L K+ M  K+ DFG+AR        + T   VGT  
Sbjct: 113 GLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYT--CVGTPY 167

Query: 645 YMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTL 689
           Y+SPE  Q   ++ K+D++S G +L E  + K   + +N + L L
Sbjct: 168 YLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVL 212

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 85.8 bits (212), Expect = 4e-18
 Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 24/213 (11%)

Query: 480 ENKLGEGGFGPVYKGRLLNG---QEVAVKRLSSQSGQG-QEEFKNEIKLIAKL-QHRNLV 534
           ++ +GEG FG V K R+       + A+KR+   + +    +F  E++++ KL  H N++
Sbjct: 12  QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 71

Query: 535 RLLGCCIELEEKILIYEYMPNKSL-DF------------FLFDSTKENLLGWGTRVRIIE 581
            LLG C       L  EY P+ +L DF            F   ++  + L     +    
Sbjct: 72  NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 131

Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            +A+G+ YL Q    + IHRDL A NIL+ ++   KI+DFG++R   G E+  K      
Sbjct: 132 DVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRL 185

Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
              +M+ E     +++  SDV+S+GVLL E +S
Sbjct: 186 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 218

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 84.8 bits (210), Expect = 5e-18
 Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 28/207 (13%)

Query: 475 ANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNL 533
           +      K+GEG  G V      + G++VAVK++  +  Q +E   NE+ ++   QH N+
Sbjct: 19  SYLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNI 78

Query: 534 VRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIE-GIA-------Q 585
           V +    +  +E  ++ E++   +L   +            T  R+ E  IA       +
Sbjct: 79  VEMYSSYLVGDELWVVMEFLEGGALTDIV------------THTRMNEEQIATVCLAVLK 126

Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGM-ARIFGGDELQSKTKRIVGTYG 644
            L +LH      VIHRD+K+ +ILL  D   K+SDFG  A++    E+  + K +VGT  
Sbjct: 127 ALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQV--SKEV-PRRKSLVGTPY 180

Query: 645 YMSPEYAQQGLFSIKSDVFSFGVLLLE 671
           +M+PE   +  +  + D++S G++++E
Sbjct: 181 WMAPEVISRLPYGTEVDIWSLGIMVIE 207

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 84.8 bits (210), Expect = 6e-18
 Identities = 78/284 (27%), Positives = 129/284 (45%), Gaps = 51/284 (17%)

Query: 483 LGEGGFGPVYKGR-LLNGQEVAVKRLSSQ-SGQGQEEFKNEIKLIAKLQH-RNLVRLLGC 539
           LG G +G V K R +  G  +AVKR+ +  + Q Q+    ++ +  +       V   G 
Sbjct: 9   LGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGA 68

Query: 540 CIELEEKILIYEYMPNKSLDFF---LFD---STKENLLGWGTRVRIIEGIAQGLLYLHQY 593
                +  +  E M + SLD F   ++D   +  E++LG     +I   I + L YLH  
Sbjct: 69  LFREGDVWICMEVM-DTSLDKFYKKVYDKGLTIPEDILG-----KIAVSIVKALEYLH-- 120

Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRI-VGTYGYMSPE--- 649
           S+L VIHRD+K SN+L++++   K+ DFG++    G  + S  K I  G   YM+PE   
Sbjct: 121 SKLSVIHRDVKPSNVLINRNGQVKLCDFGIS----GYLVDSVAKTIDAGCKPYMAPERIN 176

Query: 650 --YAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKD-----DRA 702
               Q+G + +KSDV+S G+ ++E               L      +D WK       + 
Sbjct: 177 PELNQKG-YDVKSDVWSLGITMIE---------------LATGRFPYDSWKTPFQQLKQV 220

Query: 703 WELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM 746
            E   P L  E        ++N    C++++  +RP   E++  
Sbjct: 221 VEEPSPQLPAEKFSPEFQDFVNK---CLKKNYKERPNYPELLQH 261

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 84.2 bits (209), Expect = 6e-18
 Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 19/198 (9%)

Query: 483 LGEGGFGPVYKGRLLNGQEV-AVKRLS----SQSGQGQEEFKNEIKLIAKLQHRNLVRLL 537
           LG GGFG V   ++ +     A+K +      ++GQ QE   +E +++ +  H  +V+L 
Sbjct: 1   LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQ-QEHIFSEKEILEECNHPFIVKLY 59

Query: 538 GCCIELEEKI-LIYEYMPNKSLDFFLFDSTKEN-LLGWGTRVRIIEGIAQGLLYLHQYSR 595
               + ++ I ++ EY     L    +   ++  L    T    I  +     YLH    
Sbjct: 60  -RTFKDKKYIYMLMEYCLGGEL----WTILRDRGLFDEYTARFYIACVVLAFEYLH---N 111

Query: 596 LRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGL 655
             +I+RDLK  N+LLD +   K+ DFG A+     +   KT    GT  Y++PE      
Sbjct: 112 RGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ---KTWTFCGTPEYVAPEIILNKG 168

Query: 656 FSIKSDVFSFGVLLLETL 673
           +    D +S G+LL E L
Sbjct: 169 YDFSVDYWSLGILLYELL 186

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 84.4 bits (208), Expect = 6e-18
 Identities = 61/201 (30%), Positives = 103/201 (51%), Gaps = 18/201 (8%)

Query: 483 LGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKL-QHRNLVRLLGCCI 541
           +G G +G VYKGR +   ++A  ++   +G  +EE K EI ++ K   HRN+    G  I
Sbjct: 14  VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFI 73

Query: 542 E-----LEEKI-LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSR 595
           +     +++++ L+ E+    S+   L  +TK N L       I   I +GL +LHQ+  
Sbjct: 74  KKNPPGMDDQLWLVMEFCGAGSVT-DLIKNTKGNTLKEEWIAYICREILRGLSHLHQH-- 130

Query: 596 LRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ--- 652
            +VIHRD+K  N+LL ++   K+ DFG++     D    +    +GT  +M+PE      
Sbjct: 131 -KVIHRDIKGQNVLLTENAEVKLVDFGVSAQL--DRTVGRRNTFIGTPYWMAPEVIACDE 187

Query: 653 --QGLFSIKSDVFSFGVLLLE 671
                +  KSD++S G+  +E
Sbjct: 188 NPDATYDFKSDLWSLGITAIE 208

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 84.2 bits (208), Expect = 6e-18
 Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 23/211 (10%)

Query: 475 ANFSTENKLGEGGFGPVYKG--RLLNGQE--VAVKRL-SSQSGQGQEEFKNEIKLIAKLQ 529
            +   E  LG G FG + +G  +L + +E  VA+  L +  S + +  F  E   + +  
Sbjct: 5   KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFD 64

Query: 530 HRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLY 589
           H N+VRL G        +++ EYM N +LD FL     E  L  G  + ++ G+A G+ Y
Sbjct: 65  HSNIVRLEGVITRGNTMMIVTEYMSNGALDSFL--RKHEGQLVAGQLMGMLPGLASGMKY 122

Query: 590 LHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG----- 644
           L   S +  +H+ L A  +L++ D+  KIS F   +       + K++ I  T       
Sbjct: 123 L---SEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQ-------EDKSEAIYTTMSGKSPV 172

Query: 645 -YMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
            + +PE  Q   FS  SDV+SFG+++ E +S
Sbjct: 173 LWAAPEAIQYHHFSSASDVWSFGIVMWEVMS 203

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 84.2 bits (208), Expect = 8e-18
 Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 28/206 (13%)

Query: 483 LGEGGFGPVYKGRLLNGQE-----VAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRL 536
           LG G FG V+KG  +   +     VA+K +  +SG Q  +E  + +  +  L H  +VRL
Sbjct: 15  LGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRL 74

Query: 537 LGCCIELEEKILIYEYMPNKSLDFFLFDSTKEN--------LLGWGTRVRIIEGIAQGLL 588
           LG C     + L+ +  P  SL     D  +++        LL W  +      IA+G+ 
Sbjct: 75  LGICPGASLQ-LVTQLSPLGSL----LDHVRQHRDSLDPQRLLNWCVQ------IAKGMY 123

Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSP 648
           YL ++   R++HR+L A NILL  D   +I+DFG+A +   D+ +           +M+ 
Sbjct: 124 YLEEH---RMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMAL 180

Query: 649 EYAQQGLFSIKSDVFSFGVLLLETLS 674
           E    G ++ +SDV+S+GV + E +S
Sbjct: 181 ESILFGRYTHQSDVWSYGVTVWEMMS 206

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 84.4 bits (209), Expect = 1e-17
 Identities = 57/187 (30%), Positives = 92/187 (49%), Gaps = 29/187 (15%)

Query: 481 NKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFK----NEIKLIAKLQHRNLVR 535
            K+G+G FG V+K R     Q VA+K++       +E F      EIK++  L+H N+V 
Sbjct: 18  AKIGQGTFGEVFKARHKKTKQIVALKKV--LMENEKEGFPITALREIKILQLLKHENVVN 75

Query: 536 LLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRV----------RIIEGIAQ 585
           L+  C           Y   K   + +F+  + +L G  +            ++++ +  
Sbjct: 76  LIEICRTKATP-----YNRYKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLN 130

Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK---TKRIVGT 642
           GL Y+H   R +++HRD+KA+NIL+ KD   K++DFG+AR F   +       T R+V T
Sbjct: 131 GLYYIH---RNKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVV-T 186

Query: 643 YGYMSPE 649
             Y  PE
Sbjct: 187 LWYRPPE 193

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 83.1 bits (206), Expect = 1e-17
 Identities = 61/207 (29%), Positives = 97/207 (46%), Gaps = 15/207 (7%)

Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQEV-AVKRLSSQSGQGQEEFKN---EIKLIAKLQHR 531
           +F     +G+G FG V   +  + +++ A+K ++ Q    +   +N   E +++ +L H 
Sbjct: 1   HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHP 60

Query: 532 NLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRI-IEGIAQGLLYL 590
            LV L     + E   L+ + +    L + L    K +      +V+  I  I   L YL
Sbjct: 61  FLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKVKFS----EEQVKFWICEIVLALEYL 116

Query: 591 HQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEY 650
           H      +IHRD+K  NILLD+  +  I+DF +A     D L   T    GT GYM+PE 
Sbjct: 117 HSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTL---TTSTSGTPGYMAPEV 170

Query: 651 AQQGLFSIKSDVFSFGVLLLETLSSKR 677
             +  +S+  D +S GV   E L  KR
Sbjct: 171 LCRQGYSVAVDWWSLGVTAYECLRGKR 197

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 83.4 bits (207), Expect = 2e-17
 Identities = 63/200 (31%), Positives = 100/200 (50%), Gaps = 24/200 (12%)

Query: 482 KLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFK-NEIKLIAKLQ-HRNLVRLLG 538
           +LG+G FG VY  R    G+ VA+K++  +    +E     E+K + KL  H N+V+L  
Sbjct: 6   QLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKE 65

Query: 539 CCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVR-IIEGIAQGLLYLHQ--YSR 595
              E +E   ++EYM   +L + L    K         +R II  I QGL ++H+  +  
Sbjct: 66  VFRENDELYFVFEYM-EGNL-YQLMKDRKGKPFSESV-IRSIIYQILQGLAHIHKHGF-- 120

Query: 596 LRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK---TKRIVGTYGYMSPE-YA 651
               HRDLK  N+L+      KI+DFG+AR     E++S+   T   V T  Y +PE   
Sbjct: 121 ---FHRDLKPENLLVSGPEVVKIADFGLAR-----EIRSRPPYTD-YVSTRWYRAPEILL 171

Query: 652 QQGLFSIKSDVFSFGVLLLE 671
           +   +S   D+++ G ++ E
Sbjct: 172 RSTSYSSPVDIWALGCIMAE 191

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 83.5 bits (206), Expect = 2e-17
 Identities = 66/213 (30%), Positives = 105/213 (49%), Gaps = 24/213 (11%)

Query: 480 ENKLGEGGFGPVYKGRLL---NGQEVAVKRLSSQSGQG-QEEFKNEIKLIAKL-QHRNLV 534
           E+ +GEG FG V +  +         A+K L   + +    +F  E++++ KL  H N++
Sbjct: 7   EDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNII 66

Query: 535 RLLGCCIELEEKILIYEYMPNKSLDFFLFDS---------TKE----NLLGWGTRVRIIE 581
            LLG C       +  EY P  +L  FL  S          KE    + L     ++   
Sbjct: 67  NLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFAS 126

Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            +A G+ YL   S  + IHRDL A N+L+ +++  KI+DFG++R   G+E+  K      
Sbjct: 127 DVATGMQYL---SEKQFIHRDLAARNVLVGENLASKIADFGLSR---GEEVYVKKTMGRL 180

Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
              +M+ E     +++ KSDV+SFGVLL E +S
Sbjct: 181 PVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVS 213

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 82.3 bits (203), Expect = 2e-17
 Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 23/204 (11%)

Query: 480 ENKLGEGGFGPVY---------KGRLLNGQEVAVKRLS-SQSGQGQEEFKNEIKLIAKLQ 529
           + +LG+G FG VY         + RL   +E+ V  L+ +++ Q  +E     +L++KL 
Sbjct: 5   QQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQE----AQLLSKLD 60

Query: 530 HRNLVRLLGCCIELEEKILIYEYMPNKSLDFFL--FDSTKENLLGWGTRVRIIEGIAQGL 587
           H  +V+     +E +   +I EY   + LD  L     T + L    +  ++ E   Q L
Sbjct: 61  HPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTL----SENQVCEWFIQLL 116

Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
           L +H   + R++HRDLKA NI L  ++  KI DFG++R+  G    + T    GT  YMS
Sbjct: 117 LGVHYMHQRRILHRDLKAKNIFLKNNL-LKIGDFGVSRLLMGSCDLATT--FTGTPYYMS 173

Query: 648 PEYAQQGLFSIKSDVFSFGVLLLE 671
           PE  +   +  KSD++S G +L E
Sbjct: 174 PEALKHQGYDSKSDIWSLGCILYE 197

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 82.9 bits (205), Expect = 3e-17
 Identities = 68/215 (31%), Positives = 116/215 (53%), Gaps = 32/215 (14%)

Query: 477 FSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLS-SQSGQGQEEFK-NEIKLIAKLQHRNL 533
           +    K+GEG +G VYK R  +  + +A+K++   Q  +G       EI L+ ++QH N+
Sbjct: 4   YEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI 63

Query: 534 VRLLGCCIELEEKI-LIYEYMPNKSLDFFL---FDSTKENLLGWGTRVRIIEG----IAQ 585
           VRL    +  E+++ L++EY     LD  L    DS+ +    +    R+I+     I +
Sbjct: 64  VRLQDV-VHSEKRLYLVFEY-----LDLDLKKHMDSSPD----FAKNPRLIKTYLYQILR 113

Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNP-KISDFGMARIFGGDELQSKTKRIVGTYG 644
           G+ Y H +   RV+HRDLK  N+L+D+  N  K++DFG+AR F G  +++ T  +V T  
Sbjct: 114 GIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAF-GIPVRTFTHEVV-TLW 168

Query: 645 YMSPEY---AQQGLFSIKSDVFSFGVLLLETLSSK 676
           Y +PE    ++   +S   D++S G +  E ++ K
Sbjct: 169 YRAPEILLGSRH--YSTPVDIWSVGCIFAEMVNQK 201

Length = 294

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 82.4 bits (203), Expect = 4e-17
 Identities = 79/282 (28%), Positives = 125/282 (44%), Gaps = 46/282 (16%)

Query: 483 LGEGGFGPVYKGRLLNGQE-----VAVKRL-SSQSGQGQEEFKNEIKLIAKLQHRNLVRL 536
           LG G FG VYKG  +   E     VA+K L  + S +  +E  +E  ++A +    + RL
Sbjct: 15  LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRL 74

Query: 537 LGCCIELEEKILIYEYMPNKSLDFFLFDSTKEN--------LLGWGTRVRIIEGIAQGLL 588
           LG C+    + L+ + MP   L     D  +EN        LL W  +      IA+G+ 
Sbjct: 75  LGICLTSTVQ-LVTQLMPYGCL----LDYVRENKDRIGSQDLLNWCVQ------IAKGMS 123

Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSP 648
           YL +   +R++HRDL A N+L+    + KI+DFG+AR+   DE +           +M+ 
Sbjct: 124 YLEE---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMAL 180

Query: 649 EYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELI 706
           E      F+ +SDV+S+GV + E  T  +K            LL         ++   L 
Sbjct: 181 ESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLL---------EKGERLP 231

Query: 707 DPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT 748
            P +     Y+I+ +       C   D+  RP   E+V   +
Sbjct: 232 QPPICTIDVYMIMVK-------CWMIDSECRPRFRELVDEFS 266

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 82.5 bits (204), Expect = 4e-17
 Identities = 67/208 (32%), Positives = 100/208 (48%), Gaps = 28/208 (13%)

Query: 483 LGEGGFGPVYKGR---LLNGQ---EVAVKRLSSQSGQGQEE-FKNEIKLIAKL-QHRNLV 534
           LG G FG V +     L       +VAVK L   +   + E   +E+K+++ L  H N+V
Sbjct: 43  LGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIV 102

Query: 535 RLLGCCIELEEKILIYEYMPNKSLDFFLFDS-----TKENLLGWGTRVRIIEGIAQGLLY 589
            LLG C      ++I EY     L  FL        T E+LL +  +V      A+G+ +
Sbjct: 103 NLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQV------AKGMAF 156

Query: 590 LHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE---LQSKTKRIVGTYGYM 646
           L   +    IHRDL A N+LL      KI DFG+AR    D    ++   +  V    +M
Sbjct: 157 LASKN---CIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPV---KWM 210

Query: 647 SPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           +PE     +++ +SDV+S+G+LL E  S
Sbjct: 211 APESIFNCVYTFESDVWSYGILLWEIFS 238

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 82.4 bits (203), Expect = 4e-17
 Identities = 58/198 (29%), Positives = 107/198 (54%), Gaps = 17/198 (8%)

Query: 482 KLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCC 540
           +LG+G FG VYK +    G   A K + ++S +  E++  EI+++A   H  +V+LLG  
Sbjct: 19  ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAF 78

Query: 541 IELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIH 600
               +  ++ E+ P  ++D  + +  +  L     +V I   + + L YLH    +++IH
Sbjct: 79  YWDGKLWIMIEFCPGGAVDAIMLELDR-GLTEPQIQV-ICRQMLEALQYLHS---MKIIH 133

Query: 601 RDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKR--IVGTYGYMSPEYA-----QQ 653
           RDLKA N+LL  D + K++DFG++       +++  +R   +GT  +M+PE       + 
Sbjct: 134 RDLKAGNVLLTLDGDIKLADFGVS----AKNVKTLQRRDSFIGTPYWMAPEVVMCETMKD 189

Query: 654 GLFSIKSDVFSFGVLLLE 671
             +  K+D++S G+ L+E
Sbjct: 190 TPYDYKADIWSLGITLIE 207

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 82.1 bits (203), Expect = 5e-17
 Identities = 65/219 (29%), Positives = 112/219 (51%), Gaps = 31/219 (14%)

Query: 477 FSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFK----NEIKLIAKLQHR 531
           F    ++GEG +G VYK R    G+ VA+K++   + +  E F      EIK++ +L HR
Sbjct: 9   FDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEK--EGFPITAIREIKILRQLNHR 66

Query: 532 NLVRLLGCCIE----LEEK------ILIYEYMPNK---SLDFFLFDSTKENLLGWGTRVR 578
           N+V L     +    L+ K       L++EYM +     L+  L   +++++        
Sbjct: 67  NIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHI------KS 120

Query: 579 IIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKR 638
            ++ + +GL Y H+ + L   HRD+K SNILL+     K++DFG+AR++  +E +  T +
Sbjct: 121 FMKQLLEGLNYCHKKNFL---HRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNK 177

Query: 639 IVGTYGYMSPE-YAQQGLFSIKSDVFSFGVLLLETLSSK 676
           ++ T  Y  PE    +  +    DV+S G +L E  + K
Sbjct: 178 VI-TLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKK 215

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 81.6 bits (201), Expect = 6e-17
 Identities = 58/198 (29%), Positives = 105/198 (53%), Gaps = 13/198 (6%)

Query: 477 FSTENKLGEGGFGPVYKGRLLNGQEV-AVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNLV 534
           F+   ++G+G FG V+KG     Q+V A+K +  +  + + E+ + EI ++++     + 
Sbjct: 6   FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 65

Query: 535 RLLGCCIELEEKILIYEYMPNKS-LDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY 593
           +  G  ++  +  +I EY+   S LD        E  +       +++ I +GL YLH  
Sbjct: 66  KYYGSYLKGTKLWIIMEYLGGGSALDLLRAGPFDEFQIA-----TMLKEILKGLDYLHSE 120

Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQ 653
            +   IHRD+KA+N+LL +  + K++DFG+A      + Q K    VGT  +M+PE  QQ
Sbjct: 121 KK---IHRDIKAANVLLSEQGDVKLADFGVAGQL--TDTQIKRNTFVGTPFWMAPEVIQQ 175

Query: 654 GLFSIKSDVFSFGVLLLE 671
             +  K+D++S G+  +E
Sbjct: 176 SAYDSKADIWSLGITAIE 193

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 81.1 bits (200), Expect = 8e-17
 Identities = 61/192 (31%), Positives = 100/192 (52%), Gaps = 18/192 (9%)

Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSSQ-SGQGQEEFKNEIKLIAKLQHRNLVRLLGCC 540
           LG G  G VYK   LL  + +AVK +    + + Q++  +E++++ K     ++   G  
Sbjct: 9   LGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAF 68

Query: 541 IELEEKILI-YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
             +E +I I  E+M   SLD  ++    E++LG     RI   + +GL YL     L+++
Sbjct: 69  F-VENRISICTEFMDGGSLD--VYRKIPEHVLG-----RIAVAVVKGLTYLWS---LKIL 117

Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRD+K SN+L++     K+ DFG++       + S  K  VGT  YM+PE      + I 
Sbjct: 118 HRDVKPSNMLVNTRGQVKLCDFGVSTQL----VNSIAKTYVGTNAYMAPERISGEQYGIH 173

Query: 660 SDVFSFGVLLLE 671
           SDV+S G+  +E
Sbjct: 174 SDVWSLGISFME 185

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 84.9 bits (210), Expect = 8e-17
 Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 24/273 (8%)

Query: 480 ENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLG 538
           EN +  G  G  YKG+ + NG +  VK ++  +        +EI  + KLQH N+V+L+G
Sbjct: 695 ENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPS----SEIADMGKLQHPNIVKLIG 750

Query: 539 CCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRV 598
            C   +   LI+EY+  K+L   L        L W  R +I  GIA+ L +LH      V
Sbjct: 751 LCRSEKGAYLIHEYIEGKNLSEVL------RNLSWERRRKIAIGIAKALRFLHCRCSPAV 804

Query: 599 IHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSI 658
           +  +L    I++D    P +             L     +   +  Y++PE  +    + 
Sbjct: 805 VVGNLSPEKIIIDGKDEPHL-------RLSLPGLLCTDTKCFISSAYVAPETRETKDITE 857

Query: 659 KSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLI 718
           KSD++ FG++L+E L+ K   D       +++  A   + D      IDP+++ + S  +
Sbjct: 858 KSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVS--V 915

Query: 719 LNRYI----NVGLLCVQEDAADRPTMFEVVSML 747
               I    N+ L C   D   RP   +V+  L
Sbjct: 916 NQNEIVEVMNLALHCTATDPTARPCANDVLKTL 948

Length = 968

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 81.9 bits (202), Expect = 9e-17
 Identities = 71/215 (33%), Positives = 106/215 (49%), Gaps = 26/215 (12%)

Query: 483 LGEGGFGPVY--------KGRLLNGQEVAVKRLSSQ-SGQGQEEFKNEIKLIAKL-QHRN 532
           LGEG FG V         K R      VAVK L    + +   +  +E++L+  + +H+N
Sbjct: 20  LGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKN 79

Query: 533 LVRLLGCCIELEEKILIYEYMPNKSLDFFL-----------FDSTK--ENLLGWGTRVRI 579
           ++ LLG C +     +I EY    +L  FL           FD TK  E  L +   V  
Sbjct: 80  IINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSC 139

Query: 580 IEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRI 639
              +A+G+ YL   SR R IHRDL A N+L+ +D   KI+DFG+AR     +   KT   
Sbjct: 140 AYQVARGMEYLE--SR-RCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNG 196

Query: 640 VGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
                +M+PE     +++ +SDV+SFG+L+ E  +
Sbjct: 197 RLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFT 231

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 80.9 bits (200), Expect = 1e-16
 Identities = 56/198 (28%), Positives = 101/198 (51%), Gaps = 21/198 (10%)

Query: 483 LGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQ-EEFKNEIKLIAKLQH---RNLVRLL 537
           +G G +G VY+G+ +  G+ VA+K ++  +      + + E+ L+++L+     N+ +  
Sbjct: 9   IGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYY 68

Query: 538 GCCIELEEKILIYEYMPNKSLDFFLFDST-KENLLGWGTRVRIIEGIAQGLLYLHQYSRL 596
           G  ++     +I EY    S+   +      E  +       II  +   L Y+H+    
Sbjct: 69  GSYLKGPRLWIIMEYAEGGSVRTLMKAGPIAEKYISV-----IIREVLVALKYIHKVG-- 121

Query: 597 RVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRI--VGTYGYMSPEYAQQG 654
            VIHRD+KA+NIL+    N K+ DFG+A +      Q+ +KR   VGT  +M+PE   +G
Sbjct: 122 -VIHRDIKAANILVTNTGNVKLCDFGVAALLN----QNSSKRSTFVGTPYWMAPEVITEG 176

Query: 655 -LFSIKSDVFSFGVLLLE 671
             +  K+D++S G+ + E
Sbjct: 177 KYYDTKADIWSLGITIYE 194

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 80.8 bits (199), Expect = 1e-16
 Identities = 66/226 (29%), Positives = 109/226 (48%), Gaps = 21/226 (9%)

Query: 482 KLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKN--EIKLIAKLQ---HRNLVR 535
           ++G G +G VYK R   +G  VA+K +  Q+ +         E+ L+ +L+   H N+VR
Sbjct: 7   EIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVR 66

Query: 536 LLGCCIEL----EEKI-LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYL 590
           L+  C       E K+ L++E++ ++ L  +L D      L   T   ++    +GL +L
Sbjct: 67  LMDVCATSRTDRETKVTLVFEHV-DQDLRTYL-DKVPPPGLPAETIKDLMRQFLRGLDFL 124

Query: 591 HQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEY 650
           H      ++HRDLK  NIL+      K++DFG+ARI+     Q     +V T  Y +PE 
Sbjct: 125 HAN---CIVHRDLKPENILVTSGGQVKLADFGLARIY---SCQMALTPVVVTLWYRAPEV 178

Query: 651 AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDL 696
             Q  ++   D++S G +  E    +R   F   +    LG  +DL
Sbjct: 179 LLQSTYATPVDMWSVGCIFAEMF--RRKPLFCGNSEADQLGKIFDL 222

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 80.5 bits (198), Expect = 1e-16
 Identities = 59/198 (29%), Positives = 103/198 (52%), Gaps = 13/198 (6%)

Query: 477 FSTENKLGEGGFGPVYKGRLLNGQEV-AVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNLV 534
           F+   K+G+G FG V+KG     Q+V A+K +  +  + + E+ + EI ++++     + 
Sbjct: 6   FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 65

Query: 535 RLLGCCIELEEKILIYEYMPNKS-LDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY 593
           +  G  ++  +  +I EY+   S LD        E  +       I+  I +GL YLH  
Sbjct: 66  KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-----TILREILKGLDYLHSE 120

Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQ 653
            +   IHRD+KA+N+LL +    K++DFG+A      + Q K    VGT  +M+PE  +Q
Sbjct: 121 KK---IHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNTFVGTPFWMAPEVIKQ 175

Query: 654 GLFSIKSDVFSFGVLLLE 671
             +  K+D++S G+  +E
Sbjct: 176 SAYDSKADIWSLGITAIE 193

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 80.0 bits (197), Expect = 2e-16
 Identities = 66/216 (30%), Positives = 109/216 (50%), Gaps = 24/216 (11%)

Query: 477 FSTENKLGEGGFGPVYKGRLL----NGQEVAVKRLSSQ--SGQGQEEFKNEIKLIAKLQH 530
           F+    LG+G FG V + +L     + Q+VAVK L +   S    EEF  E   + +  H
Sbjct: 1   FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDH 60

Query: 531 RNLVRLLGCCIELEEK------ILIYEYMPNKSLDFFLFDS-TKEN--LLGWGTRVRIIE 581
            N+++L+G  +    K      ++I  +M +  L  FL  S   E    L   T VR + 
Sbjct: 61  PNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMI 120

Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGDELQ--SKTKR 638
            IA G+ YL   S    IHRDL A N +L+++M   ++DFG+++ I+ GD  +    +K 
Sbjct: 121 DIASGMEYL---SSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKL 177

Query: 639 IVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
            V    +++ E     +++  SDV++FGV + E ++
Sbjct: 178 PV---KWLALESLADNVYTTHSDVWAFGVTMWEIMT 210

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 79.9 bits (197), Expect = 2e-16
 Identities = 78/296 (26%), Positives = 132/296 (44%), Gaps = 49/296 (16%)

Query: 476 NFSTENKLGEGGFGPVYK-------GRLLNGQEVAVKRLSSQSGQGQ-----EEFKNEIK 523
            ++    LG G FG VYK         LL  +E+ V   +    + +      +  +E+ 
Sbjct: 1   EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVT 60

Query: 524 LIAK-LQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEG 582
           +I + L+H N+VR     +E +   ++ + +    L    F+S KE      T  RI   
Sbjct: 61  IIKEQLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGE-HFNSLKEKK-QRFTEERIWNI 118

Query: 583 IAQ---GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRI 639
             Q    L YLH+  R  ++HRDL  +NI+L +D    I+DFG+A+     + +SK   +
Sbjct: 119 FVQMVLALRYLHKEKR--IVHRDLTPNNIMLGEDDKVTITDFGLAK---QKQPESKLTSV 173

Query: 640 VGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKD 699
           VGT  Y  PE  +   +  K+DV++FG +L +         F +TN L+L          
Sbjct: 174 VGTILYSCPEIVKNEPYGEKADVWAFGCILYQM--CTLQPPFYSTNMLSL---------- 221

Query: 700 DRAWELIDPTLQNEASYLILNRYINVGLL------CVQEDAADRPTMFEVVSMLTN 749
             A +++      EA Y  L   +    +      C+  DA  RP + +V +M+++
Sbjct: 222 --ATKIV------EAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMISD 269

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 79.7 bits (196), Expect = 2e-16
 Identities = 65/210 (30%), Positives = 105/210 (50%), Gaps = 24/210 (11%)

Query: 483 LGEGGFGPVYKGRLLNG---QEVAVKRLSSQSGQG-QEEFKNEIKLIAKL-QHRNLVRLL 537
           +GEG FG V K R+       + A+KR+   + +    +F  E++++ KL  H N++ LL
Sbjct: 3   IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 62

Query: 538 GCCIELEEKILIYEYMPNKSL-DF------------FLFDSTKENLLGWGTRVRIIEGIA 584
           G C       L  EY P+ +L DF            F   ++  + L     +     +A
Sbjct: 63  GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 122

Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG 644
           +G+ YL   S+ + IHRDL A NIL+ ++   KI+DFG++R   G E+  K         
Sbjct: 123 RGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVR 176

Query: 645 YMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           +M+ E     +++  SDV+S+GVLL E +S
Sbjct: 177 WMAIESLNYSVYTTNSDVWSYGVLLWEIVS 206

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 79.8 bits (197), Expect = 4e-16
 Identities = 44/123 (35%), Positives = 71/123 (57%), Gaps = 13/123 (10%)

Query: 551 EYMPNKSLDFFLFDSTK--ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNI 608
           E+M   SLD  L  + +  EN+LG     +I   + +GL YL +  + +++HRD+K SNI
Sbjct: 79  EHMDGGSLDQVLKKAGRIPENILG-----KISIAVLRGLTYLRE--KHKIMHRDVKPSNI 131

Query: 609 LLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVL 668
           L++     K+ DFG++    G  + S     VGT  YMSPE  Q   ++++SD++S G+ 
Sbjct: 132 LVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLS 187

Query: 669 LLE 671
           L+E
Sbjct: 188 LVE 190

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 79.8 bits (197), Expect = 5e-16
 Identities = 64/246 (26%), Positives = 104/246 (42%), Gaps = 27/246 (10%)

Query: 477 FSTENKLGEGGFGPVYKGRLLNGQE-VAVKRLSSQSGQGQEEFK---NEIKLIAKLQHRN 532
           F    ++G+GG+G V+  +  +  E VA+KR+         E +    E  ++   +   
Sbjct: 3   FQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEW 62

Query: 533 LVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
           LV+LL    + E   L  EY+P    DF    +    L     R  + E     +  LH 
Sbjct: 63  LVKLLYAFQDDEYLYLAMEYVPGG--DFRTLLNNLGVLSEDHARFYMAEMFE-AVDALH- 118

Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ 652
              L  IHRDLK  N L+D   + K++DFG+++      + +    +VG+  YM+PE  +
Sbjct: 119 --ELGYIHRDLKPENFLIDASGHIKLTDFGLSK-----GIVTYANSVVGSPDYMAPEVLR 171

Query: 653 QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTN-SLTLLGH-----AWDLWKD------D 700
              +    D +S G +L E L        S  N +   L +        ++ D      D
Sbjct: 172 GKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSD 231

Query: 701 RAWELI 706
            AW+LI
Sbjct: 232 EAWDLI 237

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 77.9 bits (192), Expect = 7e-16
 Identities = 58/214 (27%), Positives = 108/214 (50%), Gaps = 15/214 (7%)

Query: 482 KLGEGGFGPVYKGRLL----NGQEVAVKRL--SSQSGQGQEEFKNEIKLIAKLQHRNLVR 535
           K+GEG FG   K  L+    +G++  +K +  S  S + +EE + E+ +++ ++H N+V+
Sbjct: 7   KIGEGSFG---KAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQ 63

Query: 536 LLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSR 595
                 E     ++ +Y     L +   ++ +  L       +I++   Q  L L     
Sbjct: 64  YQESFEENGNLYIVMDYCEGGDL-YKKINAQRGVLF---PEDQILDWFVQICLALKHVHD 119

Query: 596 LRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGL 655
            +++HRD+K+ NI L KD   K+ DFG+AR+       ++T   +GT  Y+SPE  +   
Sbjct: 120 RKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELART--CIGTPYYLSPEICENRP 177

Query: 656 FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTL 689
           ++ KSD+++ G +L E  + K   +  N  +L L
Sbjct: 178 YNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVL 211

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 78.1 bits (193), Expect = 2e-15
 Identities = 54/194 (27%), Positives = 88/194 (45%), Gaps = 31/194 (15%)

Query: 477 FSTENKLGEGGFGPVYKGRLLN---GQEVAVKRLSSQSGQGQ---EEFKNEIKLIAKLQH 530
           +  E  +G G +G VYK +  N   G+E A+K+      Q     +    EI L+ +L+H
Sbjct: 2   YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKH 61

Query: 531 RNLVRLLGCCIELEEKI--LIYEYMPNKSLDFFLFDSTKENLLGWGTRVR-IIEGIAQGL 587
            N+V L+   +E  +K   L+++Y  +       F    + +    + V+ ++  I  G+
Sbjct: 62  ENVVSLVEVFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGV 121

Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNP----KISDFGMARIF--------GGDELQSK 635
            YLH      V+HRDLK +NIL+  +       KI D G+AR+F          D     
Sbjct: 122 HYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLD----- 173

Query: 636 TKRIVGTYGYMSPE 649
              +V T  Y +PE
Sbjct: 174 --PVVVTIWYRAPE 185

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 77.1 bits (190), Expect = 2e-15
 Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 16/200 (8%)

Query: 482 KLGEGGFGPVYKG--RLLNGQE--VAVKRLSSQSGQG-QEEFKNEIKLIAKLQHRNLVRL 536
            +GEG FG VY+G       ++  VAVK   + +    +E+F  E  ++ +  H ++V+L
Sbjct: 13  CIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKL 72

Query: 537 LGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRL 596
           +G   E     ++ E  P   L  +L     +  L   + +     ++  L YL      
Sbjct: 73  IGVITE-NPVWIVMELAPLGELRSYL--QVNKYSLDLASLILYSYQLSTALAYLES---K 126

Query: 597 RVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL--QSKTKRIVGTYGYMSPEYAQQG 654
           R +HRD+ A N+L+      K+ DFG++R    +     SK K  +    +M+PE     
Sbjct: 127 RFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPI---KWMAPESINFR 183

Query: 655 LFSIKSDVFSFGVLLLETLS 674
            F+  SDV+ FGV + E L 
Sbjct: 184 RFTSASDVWMFGVCMWEILM 203

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 77.4 bits (191), Expect = 2e-15
 Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 40/210 (19%)

Query: 483 LGEGGFGPVYKGRLLN-GQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQH-RNLVRLLG- 538
           +G G FG V K      G  +AVKR+ S    + Q+    ++ ++ +      +V+  G 
Sbjct: 12  IGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGA 71

Query: 539 ------C--CIELEEKILIYEYMPNKSLDFFLFDSTK----ENLLGWGTRVRIIEGIAQG 586
                 C  C+EL +  L   Y        ++++  K    E +LG     +I     + 
Sbjct: 72  LFREGDCWICMELMDISLDKFYK-------YVYEVLKSVIPEEILG-----KIAVATVKA 119

Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTK-RIVGTYGY 645
           L YL +   L++IHRD+K SNILLD++ N K+ DFG++    G  + S  K R  G   Y
Sbjct: 120 LNYLKE--ELKIIHRDVKPSNILLDRNGNIKLCDFGIS----GQLVDSIAKTRDAGCRPY 173

Query: 646 MSPE----YAQQGLFSIKSDVFSFGVLLLE 671
           M+PE     A+ G + ++SDV+S G+ L E
Sbjct: 174 MAPERIDPSARDG-YDVRSDVWSLGITLYE 202

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 76.2 bits (187), Expect = 4e-15
 Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 18/217 (8%)

Query: 467 LASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIA 526
           L+++      F     +G G +G VYKGR +   ++A  ++   +   +EE K EI ++ 
Sbjct: 8   LSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLK 67

Query: 527 KL-QHRNLVRLLGCCIEL------EEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRI 579
           K   HRN+    G  I+       ++  L+ E+    S+   L  +TK N L       I
Sbjct: 68  KYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVT-DLVKNTKGNALKEDWIAYI 126

Query: 580 IEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRI 639
              I +GL +LH +   +VIHRD+K  N+LL ++   K+ DFG++     D    +    
Sbjct: 127 CREILRGLAHLHAH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQL--DRTVGRRNTF 181

Query: 640 VGTYGYMSPEYAQ-----QGLFSIKSDVFSFGVLLLE 671
           +GT  +M+PE           +  +SD++S G+  +E
Sbjct: 182 IGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIE 218

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 76.6 bits (189), Expect = 4e-15
 Identities = 65/221 (29%), Positives = 106/221 (47%), Gaps = 40/221 (18%)

Query: 475 ANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKN--EIKLIAKLQHR 531
             F   N++GEG +G VY+ R   +G+ VA+K++   + +      +  EI L+  L+H 
Sbjct: 7   TEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHP 66

Query: 532 NLVRLLGCCI--ELEEKILIYEY--------MPNKSLDFFLFDSTKENLLGWGTRVR-II 580
           N+V L    +   L+   L+ EY        + N    F    S  +        V+ ++
Sbjct: 67  NIVELKEVVVGKHLDSIFLVMEYCEQDLASLLDNMPTPF----SESQ--------VKCLM 114

Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIV 640
             + +GL YLH+     +IHRDLK SN+LL      KI+DFG+AR + G   +  T ++V
Sbjct: 115 LQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLARTY-GLPAKPMTPKVV 170

Query: 641 GTYGYMSPEYAQQGLFSIKS-----DVFSFGVLLLETLSSK 676
            T  Y +PE     L    +     D+++ G +L E L+ K
Sbjct: 171 -TLWYRAPEL----LLGCTTYTTAIDMWAVGCILAELLAHK 206

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 77.2 bits (190), Expect = 4e-15
 Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 43/210 (20%)

Query: 481 NKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKN----EIKLIAKLQHRNLVR 535
           N++G G  G VYK      G+  A+K +    G  ++  +     EI+++  + H N+V+
Sbjct: 80  NRIGSGAGGTVYKVIHRPTGRLYALKVIY---GNHEDTVRRQICREIEILRDVNHPNVVK 136

Query: 536 LLGCCIELEEKILIYEYMPNKSLD-------FFLFDSTKENLLGWGTRVRIIEGIAQGLL 588
                    E  ++ E+M   SL+        FL D  ++          I+ GIA    
Sbjct: 137 CHDMFDHNGEIQVLLEFMDGGSLEGTHIADEQFLADVARQ----------ILSGIA---- 182

Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG--DELQSKTKRIVGTYGYM 646
           YLH   R  ++HRD+K SN+L++   N KI+DFG++RI     D   S     VGT  YM
Sbjct: 183 YLH---RRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSS----VGTIAYM 235

Query: 647 SPEYA----QQGLFS-IKSDVFSFGVLLLE 671
           SPE        G +     D++S GV +LE
Sbjct: 236 SPERINTDLNHGAYDGYAGDIWSLGVSILE 265

Length = 353

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 77.0 bits (189), Expect = 4e-15
 Identities = 65/215 (30%), Positives = 105/215 (48%), Gaps = 26/215 (12%)

Query: 483 LGEGGFGPVY--------KGRLLNGQEVAVKRLSSQ-SGQGQEEFKNEIKLIAKL-QHRN 532
           LGEG FG V         K +      VAVK L    + +   +  +E++++  + +H+N
Sbjct: 20  LGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKN 79

Query: 533 LVRLLGCCIELEEKILIYEYMPNKSLDFFL-----------FDSTK--ENLLGWGTRVRI 579
           ++ LLG C +     ++ EY    +L  +L           FD+ K  E  L +   V  
Sbjct: 80  IINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSC 139

Query: 580 IEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRI 639
              +A+G+ YL   +  + IHRDL A N+L+ +D   KI+DFG+AR     +   KT   
Sbjct: 140 AYQVARGMEYL---ASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNG 196

Query: 640 VGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
                +M+PE     +++ +SDV+SFGVLL E  +
Sbjct: 197 RLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFT 231

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 76.6 bits (188), Expect = 4e-15
 Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 26/215 (12%)

Query: 483 LGEGGFGPVYKGRLLNGQE--------VAVKRLSSQSGQGQ-EEFKNEIKLIAKL-QHRN 532
           LGEG FG V     +   +        VAVK L S + +    +  +E++++  + +H+N
Sbjct: 26  LGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 85

Query: 533 LVRLLGCCIELEEKILIYEYMPNKSLDFFLF-------------DSTKENLLGWGTRVRI 579
           ++ LLG C +     +I EY    +L  +L                  E  L +   V  
Sbjct: 86  IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSC 145

Query: 580 IEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRI 639
              +A+G+ YL   +  + IHRDL A N+L+ +D   KI+DFG+AR     +   KT   
Sbjct: 146 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 202

Query: 640 VGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
                +M+PE     +++ +SDV+SFGVLL E  +
Sbjct: 203 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 237

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 76.6 bits (189), Expect = 5e-15
 Identities = 61/200 (30%), Positives = 95/200 (47%), Gaps = 21/200 (10%)

Query: 483 LGEGGFGPVYKGRLLNGQEV-AVKRLSSQSGQGQEEFK---NEIKLIAKL-QHRNLVRLL 537
           LG+G FG V    L    E+ AVK L        ++ +    E +++A   +H  L +L 
Sbjct: 3   LGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLH 62

Query: 538 GCCIELEEKI-LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEG-IAQGLLYLHQYSR 595
             C + ++++  + EY+    L F +  S + +      R R     I  GL +LH+   
Sbjct: 63  -SCFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDE----PRARFYAAEIVLGLQFLHERG- 116

Query: 596 LRVIHRDLKASNILLDKDMNPKISDFGMAR--IFGGDELQSKTKRIVGTYGYMSPEYAQQ 653
             +I+RDLK  N+LLD + + KI+DFGM +  I GG      T    GT  Y++PE    
Sbjct: 117 --IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGV----TTSTFCGTPDYIAPEILSY 170

Query: 654 GLFSIKSDVFSFGVLLLETL 673
             +    D ++ GVLL E L
Sbjct: 171 QPYGPAVDWWALGVLLYEML 190

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 75.1 bits (184), Expect = 8e-15
 Identities = 54/202 (26%), Positives = 104/202 (51%), Gaps = 16/202 (7%)

Query: 476 NFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
           +F    ++G G +G VYK R +N G+  A+K +  + G+     + EI ++   +H N+V
Sbjct: 10  DFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIV 69

Query: 535 RLLGCCIELEEKILIYEYMPNKSLD--FFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
              G  +  ++  +  E+    SL   + +     E+ + + +R  +     QGL YLH 
Sbjct: 70  AYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETL-----QGLYYLHS 124

Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYA- 651
             +   +HRD+K +NILL  + + K++DFG++         +K K  +GT  +M+PE A 
Sbjct: 125 KGK---MHRDIKGANILLTDNGHVKLADFGVSAQITAT--IAKRKSFIGTPYWMAPEVAA 179

Query: 652 --QQGLFSIKSDVFSFGVLLLE 671
             ++G ++   D+++ G+  +E
Sbjct: 180 VERKGGYNQLCDIWAVGITAIE 201

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 74.7 bits (183), Expect = 9e-15
 Identities = 57/202 (28%), Positives = 100/202 (49%), Gaps = 16/202 (7%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
           ++    ++G G +G VYK R L  G+  AVK +  + G      + EI ++ + +H N+V
Sbjct: 10  DYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIV 69

Query: 535 RLLGCCIELEEKILIYEYMPNKSLD--FFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
              G  +  E+  +  EY    SL   + +     E  + +  R  +     QGL YLH 
Sbjct: 70  AYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETL-----QGLAYLHS 124

Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYA- 651
             ++   HRD+K +NILL  + + K++DFG+A         +K K  +GT  +M+PE A 
Sbjct: 125 KGKM---HRDIKGANILLTDNGDVKLADFGVAAKITAT--IAKRKSFIGTPYWMAPEVAA 179

Query: 652 --QQGLFSIKSDVFSFGVLLLE 671
             + G ++   D+++ G+  +E
Sbjct: 180 VEKNGGYNQLCDIWAVGITAIE 201

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 75.2 bits (185), Expect = 9e-15
 Identities = 49/150 (32%), Positives = 85/150 (56%), Gaps = 9/150 (6%)

Query: 482 KLGEGGFGPVYKGRLLNGQE-VAVKRLSSQS-GQGQEEFK-NEIKLIAKLQHRNLVRLLG 538
           K+GEG +G V+K +     E VA+KR+      +G       EI L+ +L+H+N+VRL  
Sbjct: 7   KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYD 66

Query: 539 CCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRV 598
                ++  L++EY  ++ L  + FDS   ++     +  + + + +GL + H +    V
Sbjct: 67  VLHSDKKLTLVFEYC-DQDLKKY-FDSCNGDIDPEIVKSFMFQ-LLKGLAFCHSH---NV 120

Query: 599 IHRDLKASNILLDKDMNPKISDFGMARIFG 628
           +HRDLK  N+L++K+   K++DFG+AR FG
Sbjct: 121 LHRDLKPQNLLINKNGELKLADFGLARAFG 150

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 75.3 bits (186), Expect = 1e-14
 Identities = 70/223 (31%), Positives = 112/223 (50%), Gaps = 46/223 (20%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFK----NEIKLIAKLQH 530
            +   N++ EG +G VY+ R    G+ VA+K+L  +  +  E F      EI ++ KLQH
Sbjct: 6   EYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK--EGFPITSLREINILLKLQH 63

Query: 531 RNLVRL----LGCCIELEEKI-LIYEYMPN--KSL-----DFFLFDSTKENLLGWGTRVR 578
            N+V +    +G  ++   KI ++ EY+ +  KSL       FL    K  L+     ++
Sbjct: 64  PNIVTVKEVVVGSNLD---KIYMVMEYVEHDLKSLMETMKQPFLQSEVK-CLM-----LQ 114

Query: 579 IIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKR 638
           ++ G+A    +LH      ++HRDLK SN+LL+     KI DFG+AR + G  L+  T+ 
Sbjct: 115 LLSGVA----HLHDNW---ILHRDLKTSNLLLNNRGILKICDFGLAREY-GSPLKPYTQL 166

Query: 639 IVGTYGYMSPEYAQQGLFSIKS-----DVFSFGVLLLETLSSK 676
           +V T  Y +PE     L   K      D++S G +  E L+ K
Sbjct: 167 VV-TLWYRAPEL----LLGAKEYSTAIDMWSVGCIFAELLTKK 204

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 74.6 bits (184), Expect = 1e-14
 Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 22/202 (10%)

Query: 486 GGFGPVYKGR-LLNGQEVAVKRLSSQSGQG---QEEFKNEIKLIAKLQHRNLVRLLGCCI 541
           G +G V+  +    G   A+K +           ++   E  ++++ Q   +V+L     
Sbjct: 4   GAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLY-YSF 62

Query: 542 ELEEKI-LIYEYMPNKSLDFFL--FDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRV 598
           + ++ + L+ EY+P   L   L    S  E++     R+ I E I   L YLH      +
Sbjct: 63  QGKKNLYLVMEYLPGGDLASLLENVGSLDEDV----ARIYIAE-IVLALEYLHSNG---I 114

Query: 599 IHRDLKASNILLDKDMNPKISDFG------MARIFGGDELQSKTKRIVGTYGYMSPEYAQ 652
           IHRDLK  NIL+D + + K++DFG      + R    ++ + + KRIVGT  Y++PE   
Sbjct: 115 IHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVIL 174

Query: 653 QGLFSIKSDVFSFGVLLLETLS 674
               S   D +S G +L E L 
Sbjct: 175 GQGHSKTVDWWSLGCILYEFLV 196

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 78.0 bits (192), Expect = 1e-14
 Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 24/194 (12%)

Query: 499 GQEVAVKRLSSQSGQGQEE---FKNEIKLIAKLQHRNLVRLL--GCCIELEEKIL--IYE 551
           G EVA+K L + + + + +   F+ E  L A+L H N+V LL  G        +L  ++E
Sbjct: 3   GHEVAIKLLRTDAPEEEHQRARFRRETALCARLYHPNIVALLDSGEA---PPGLLFAVFE 59

Query: 552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILL- 610
           Y+P ++L   L     +  L  G   R++  +   L   H      ++HRDLK  NI++ 
Sbjct: 60  YVPGRTLREVL---AADGALPAGETGRLMLQVLDALACAH---NQGIVHRDLKPQNIMVS 113

Query: 611 --DKDMNPKISDFGMARIFGG----DELQ-SKTKRIVGTYGYMSPEYAQQGLFSIKSDVF 663
                 + K+ DFG+  +  G    D    ++T  ++GT  Y +PE  +    +  SD++
Sbjct: 114 QTGVRPHAKVLDFGIGTLLPGVRDADVATLTRTTEVLGTPTYCAPEQLRGEPVTPNSDLY 173

Query: 664 SFGVLLLETLSSKR 677
           ++G++ LE L+ +R
Sbjct: 174 AWGLIFLECLTGQR 187

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 75.0 bits (185), Expect = 1e-14
 Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 14/179 (7%)

Query: 476 NFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKN----EIKLIAKLQH 530
            +     +GEG +G V K R    G+ VA+K+   +  +  E+ K     E+K++ +L+H
Sbjct: 2   KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKF--KESEDDEDVKKTALREVKVLRQLRH 59

Query: 531 RNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYL 590
            N+V L           L++EY+    L+  L +++   L     R   I  + Q + Y 
Sbjct: 60  ENIVNLKEAFRRKGRLYLVFEYVERTLLE--LLEASPGGLPPDAVR-SYIWQLLQAIAYC 116

Query: 591 HQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPE 649
           H      +IHRD+K  NIL+ +    K+ DFG AR          T   V T  Y +PE
Sbjct: 117 H---SHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTD-YVATRWYRAPE 171

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 74.5 bits (184), Expect = 2e-14
 Identities = 60/203 (29%), Positives = 90/203 (44%), Gaps = 31/203 (15%)

Query: 483 LGEGGFGPVYKGRLLNGQEV-AVKRLSSQS--GQGQEE-FKNEIKLIAKLQHRNLVRLLG 538
           LG G FG V   R     +  A+K LS        Q E   NE +++  ++H  LV L G
Sbjct: 9   LGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYG 68

Query: 539 CCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQ--------GLLYL 590
              +     L+ EY+P   L F     +           R  E +A+         L YL
Sbjct: 69  SFQDDSNLYLVMEYVPGGEL-FSHLRKSG----------RFPEPVARFYAAQVVLALEYL 117

Query: 591 HQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEY 650
           H    L +++RDLK  N+LLD D   KI+DFG A+      ++ +T  + GT  Y++PE 
Sbjct: 118 HS---LDIVYRDLKPENLLLDSDGYIKITDFGFAK-----RVKGRTYTLCGTPEYLAPEI 169

Query: 651 AQQGLFSIKSDVFSFGVLLLETL 673
                +    D ++ G+L+ E L
Sbjct: 170 ILSKGYGKAVDWWALGILIYEML 192

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 74.7 bits (183), Expect = 2e-14
 Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 26/215 (12%)

Query: 483 LGEGGFGPVY--------KGRLLNGQEVAVKRLSSQSGQGQ-EEFKNEIKLIAKL-QHRN 532
           LGEG FG V         K +      VAVK L   + +    +  +E++++  + +H+N
Sbjct: 23  LGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 82

Query: 533 LVRLLGCCIELEEKILIYEYMPNKSLDFFL-----------FDSTK--ENLLGWGTRVRI 579
           ++ LLG C +     +I EY    +L  +L           +D  +  +  + +   V  
Sbjct: 83  IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSC 142

Query: 580 IEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRI 639
              +A+G+ YL   +  + IHRDL A N+L+ ++   KI+DFG+AR     +   KT   
Sbjct: 143 TYQVARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNG 199

Query: 640 VGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
                +M+PE     +++ +SDV+SFGVL+ E  +
Sbjct: 200 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 234

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 73.9 bits (182), Expect = 2e-14
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 19/175 (10%)

Query: 482 KLGEGGFGPVYKGR-LLNGQEVAVKRL--SSQSGQGQEEFKNEIKLIAKLQHRNLVRLLG 538
           K+GEG +G V+K R    GQ VA+K+   S      ++    EI+++ +L+H NLV L+ 
Sbjct: 8   KIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIE 67

Query: 539 CCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGW--GTRVRIIEGIAQGLLYLHQYSRL 596
                 +  L++EY      D  + +  ++N  G       +II    Q + + H+++  
Sbjct: 68  VFRRKRKLHLVFEY-----CDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHN-- 120

Query: 597 RVIHRDLKASNILLDKDMNPKISDFGMARIF--GGDELQSKTKRIVGTYGYMSPE 649
             IHRD+K  NIL+ K    K+ DFG ARI    GD+        V T  Y +PE
Sbjct: 121 -CIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTD----YVATRWYRAPE 170

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 73.9 bits (181), Expect = 3e-14
 Identities = 54/197 (27%), Positives = 96/197 (48%), Gaps = 12/197 (6%)

Query: 482 KLGEGGFGPV-YKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCC 540
           K+GEG  G V        G++VAVK++  +  Q +E   NE+ ++    H N+V +    
Sbjct: 29  KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSY 88

Query: 541 IELEEKILIYEYMPNKSL-DFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
           +  +E  ++ E++   +L D        E  +       +   + + L YLH      VI
Sbjct: 89  LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----TVCLSVLRALSYLHNQG---VI 140

Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRD+K+ +ILL  D   K+SDFG       +    K K +VGT  +M+PE   +  +  +
Sbjct: 141 HRDIKSDSILLTSDGRIKLSDFGFCAQVSKE--VPKRKSLVGTPYWMAPEVISRLPYGTE 198

Query: 660 SDVFSFGVLLLETLSSK 676
            D++S G++++E +  +
Sbjct: 199 VDIWSLGIMVIEMIDGE 215

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 74.1 bits (183), Expect = 3e-14
 Identities = 49/178 (27%), Positives = 75/178 (42%), Gaps = 57/178 (32%)

Query: 483 LGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKN---------EIKLIAKLQHRN 532
           +G G +G V        G++VA+K++          F +         EIKL+  L+H N
Sbjct: 8   IGSGAYGVVCSAVDKRTGRKVAIKKI-------SNVFDDLIDAKRILREIKLLRHLRHEN 60

Query: 533 LVRLLGCCI-----ELEEKILIYEYMP---------NKSLD-----FFLFDSTKENLLGW 573
           ++ LL         +  +  ++ E M           + L      +FL+      +L  
Sbjct: 61  IIGLLDILRPPSPEDFNDVYIVTELMETDLHKVIKSPQPLTDDHIQYFLY-----QIL-- 113

Query: 574 GTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE 631
                      +GL YLH      VIHRDLK SNIL++ + + KI DFG+AR    DE
Sbjct: 114 -----------RGLKYLH---SANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDE 157

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 73.5 bits (180), Expect = 3e-14
 Identities = 55/193 (28%), Positives = 99/193 (51%), Gaps = 14/193 (7%)

Query: 482 KLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCC 540
           K+GEG  G V    +  +G+ VAVK++  +  Q +E   NE+ ++   QH N+V +    
Sbjct: 27  KIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86

Query: 541 IELEEKILIYEYMPNKSL-DFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
           +  +E  ++ E++   +L D        E  +       +   + + L  LH      VI
Sbjct: 87  LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLKALSVLHAQG---VI 138

Query: 600 HRDLKASNILLDKDMNPKISDFGM-ARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSI 658
           HRD+K+ +ILL  D   K+SDFG  A++    E+  + K +VGT  +M+PE   +  +  
Sbjct: 139 HRDIKSDSILLTHDGRVKLSDFGFCAQV--SKEVPRR-KSLVGTPYWMAPELISRLPYGP 195

Query: 659 KSDVFSFGVLLLE 671
           + D++S G++++E
Sbjct: 196 EVDIWSLGIMVIE 208

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

 Score = 73.0 bits (179), Expect = 4e-14
 Identities = 52/149 (34%), Positives = 74/149 (49%), Gaps = 9/149 (6%)

Query: 482 KLGEGGFGPVYKGRL---LNGQEVAVKRL-SSQSGQGQEEFKNEIKLIAKLQHRNLVRLL 537
           ++G G FG V  G +       +V VK L  S S Q Q +F  E +    LQH NL++ L
Sbjct: 2   EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCL 61

Query: 538 GCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRV--RIIEGIAQGLLYLHQYSR 595
           G C E+   +L+ E+ P   L  +L    K  L+        R+   IA GLL+LH+ + 
Sbjct: 62  GQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN- 120

Query: 596 LRVIHRDLKASNILLDKDMNPKISDFGMA 624
              IH DL   N LL  D+  KI D+G++
Sbjct: 121 --FIHSDLALRNCLLTADLTVKIGDYGLS 147

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 72.7 bits (178), Expect = 5e-14
 Identities = 58/198 (29%), Positives = 103/198 (52%), Gaps = 17/198 (8%)

Query: 482 KLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCC 540
           +LG+G FG VYK +    G   A K + ++S +  E++  EI ++A   H N+V+LL   
Sbjct: 12  ELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 71

Query: 541 IELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIH 600
                  ++ E+    ++D  + +  +  L     RV + +   + L YLH+    ++IH
Sbjct: 72  YYENNLWILIEFCAGGAVDAVMLELERP-LTEPQIRV-VCKQTLEALNYLHEN---KIIH 126

Query: 601 RDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKR--IVGTYGYMSPEY-----AQQ 653
           RDLKA NIL   D + K++DFG++        ++  +R   +GT  +M+PE      ++ 
Sbjct: 127 RDLKAGNILFTLDGDIKLADFGVS----AKNTRTIQRRDSFIGTPYWMAPEVVMCETSKD 182

Query: 654 GLFSIKSDVFSFGVLLLE 671
             +  K+DV+S G+ L+E
Sbjct: 183 RPYDYKADVWSLGITLIE 200

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 72.5 bits (178), Expect = 1e-13
 Identities = 63/231 (27%), Positives = 102/231 (44%), Gaps = 50/231 (21%)

Query: 467 LASVSAATANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLS---SQSGQGQEEFKNEI 522
             +V   T  +     +G G FG V   R  L GQ VA+K++    S     +  ++ E+
Sbjct: 2   FGTVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYR-EL 60

Query: 523 KLIAKLQHRNLVRLLGCCIE-LEEKILIYEYM-------------PNKSLDFFLFDSTKE 568
           KL+  L+H N++ L    I  LE+   + E +               + + +FL+     
Sbjct: 61  KLLKHLRHENIISLSDIFISPLEDIYFVTELLGTDLHRLLTSRPLEKQFIQYFLYQ---- 116

Query: 569 NLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG 628
                         I +GL Y+H      V+HRDLK SNIL++++ + KI DFG+ARI  
Sbjct: 117 --------------ILRGLKYVHSAG---VVHRDLKPSNILINENCDLKICDFGLARI-- 157

Query: 629 GDELQSKTKRIVGTYGYMSPEYA---QQGLFSIKSDVFSFGVLLLETLSSK 676
                 +    V T  Y +PE     Q+  + ++ D++S G +  E L  K
Sbjct: 158 ---QDPQMTGYVSTRYYRAPEIMLTWQK--YDVEVDIWSAGCIFAEMLEGK 203

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 71.3 bits (175), Expect = 2e-13
 Identities = 54/213 (25%), Positives = 99/213 (46%), Gaps = 29/213 (13%)

Query: 475 ANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQ---SGQGQEEFKNEIKLIAKLQH 530
            +      +G G FG V+  R  ++    A+K ++       + ++   NE +++ ++ H
Sbjct: 1   DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSH 60

Query: 531 RNLVRLLGCCIELEEKIL--IYEYMPNKSLDFFL-----FDSTKENLLGWGTRVRIIEGI 583
             ++RL     E +++ L  + EY+P   L  +L     F ++                I
Sbjct: 61  PFIIRLF--WTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYA--------SEI 110

Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
              L YLH      +++RDLK  NILLDK+ + K++DFG A+     +L+ +T  + GT 
Sbjct: 111 VCALEYLHS---KEIVYRDLKPENILLDKEGHIKLTDFGFAK-----KLRDRTWTLCGTP 162

Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
            Y++PE  Q    +   D ++ G+L+ E L   
Sbjct: 163 EYLAPEVIQSKGHNKAVDWWALGILIYEMLVGY 195

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 71.9 bits (177), Expect = 2e-13
 Identities = 59/225 (26%), Positives = 101/225 (44%), Gaps = 47/225 (20%)

Query: 476 NFSTENKLGEGGFGPVYKG-RLLNGQEVAVKRLSSQSGQ--GQEEFKNEIKLIAKLQHRN 532
            +   + +GEG +G V        G +VA+K++S    Q   Q   + EIK++ + +H N
Sbjct: 6   RYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLR-EIKILRRFKHEN 64

Query: 533 LVRLLGCCI-----ELEEKILIYEYMP-------------NKSLDFFLFDSTKENLLGWG 574
           ++ +L            +  ++ E M              N  + +FL+           
Sbjct: 65  IIGILDIIRPPSFESFNDVYIVQELMETDLYKLIKTQHLSNDHIQYFLYQ---------- 114

Query: 575 TRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQS 634
                   I +GL Y+H  +   V+HRDLK SN+LL+ + + KI DFG+ARI   +   +
Sbjct: 115 --------ILRGLKYIHSAN---VLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHT 163

Query: 635 KT-KRIVGTYGYMSPE--YAQQGLFSIKSDVFSFGVLLLETLSSK 676
                 V T  Y +PE     +G ++   D++S G +L E LS++
Sbjct: 164 GFLTEYVATRWYRAPEIMLNSKG-YTKAIDIWSVGCILAEMLSNR 207

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 71.0 bits (174), Expect = 3e-13
 Identities = 66/207 (31%), Positives = 97/207 (46%), Gaps = 23/207 (11%)

Query: 482 KLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRN-LVRLL 537
           K+GEG +G VYK R    G+ VA+K  RL             EI L+  L     +VRLL
Sbjct: 8   KIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLL 67

Query: 538 GCCIELEEKI------LIYEYMPNKSLDFFLFDSTKE---NLLGWGTRVRIIEGIAQGLL 588
                +EEK       L++EY+ +  L  F+ DS        L   T    +  + +G+ 
Sbjct: 68  -DVEHVEEKNGKPSLYLVFEYL-DSDLKKFM-DSNGRGPGRPLPAKTIKSFMYQLLKGVA 124

Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNP-KISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
           + H++    V+HRDLK  N+L+DK     KI+D G+ R F    ++S T  IV T  Y +
Sbjct: 125 HCHKHG---VMHRDLKPQNLLVDKQKGLLKIADLGLGRAF-SIPVKSYTHEIV-TLWYRA 179

Query: 648 PEYAQQGL-FSIKSDVFSFGVLLLETL 673
           PE       +S   D++S G +  E  
Sbjct: 180 PEVLLGSTHYSTPVDIWSVGCIFAEMS 206

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 71.3 bits (175), Expect = 3e-13
 Identities = 63/251 (25%), Positives = 111/251 (44%), Gaps = 51/251 (20%)

Query: 481 NKLGEGGFGPVYKGR-LLNGQEVAVKR--LSSQSGQGQEEFKN------------EIKLI 525
             LGEG +G V K    L G+ VA+K+  +   S    ++ +             E+K++
Sbjct: 15  AHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIM 74

Query: 526 AKLQHRNLVRLLGCCIELEEKILIYEYMPN---KSLD--FFLFDSTKENLLGWGTRVRII 580
            +++H N++ L+   +E +   L+ + M +   K +D    L +S  +          I+
Sbjct: 75  NEIKHENIMGLVDVYVEGDFINLVMDIMASDLKKVVDRKIRLTESQVKC---------IL 125

Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRI- 639
             I  GL  LH++     +HRDL  +NI ++     KI+DFG+AR +G         +  
Sbjct: 126 LQILNGLNVLHKWY---FMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDE 182

Query: 640 -----------VGTYGYMSPEY---AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTN 685
                      V T  Y +PE    A++  F++  D++S G +  E L+ K    F   N
Sbjct: 183 TMQRREEMTSKVVTLWYRAPELLMGAEKYHFAV--DMWSVGCIFAELLTGK--PLFPGEN 238

Query: 686 SLTLLGHAWDL 696
            +  LG  ++L
Sbjct: 239 EIDQLGRIFEL 249

Length = 335

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 70.5 bits (173), Expect = 3e-13
 Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 15/173 (8%)

Query: 482 KLGEGGFGPVYKGRLLN-GQEVAVKRL--SSQSGQGQEEFKNEIKLIAKLQHRNLVRLLG 538
            +GEG +G V K +    GQ VA+K+   S      ++    EI+++ +L+H NLV L+ 
Sbjct: 8   LVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIE 67

Query: 539 CCIELEEKILIYEYMPNKSLDFFLFDSTK-ENLLGWGTRVRIIEGIAQGLLYLHQYSRLR 597
                +   L++E++ +  LD    D  K  N L      + +  I +G+ + H ++   
Sbjct: 68  VFRRKKRLYLVFEFVDHTVLD----DLEKYPNGLDESRVRKYLFQILRGIEFCHSHN--- 120

Query: 598 VIHRDLKASNILLDKDMNPKISDFGMAR-IFGGDELQSKTKRIVGTYGYMSPE 649
           +IHRD+K  NIL+ +    K+ DFG AR +    E+ +     V T  Y +PE
Sbjct: 121 IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTD---YVATRWYRAPE 170

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 70.6 bits (173), Expect = 3e-13
 Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 18/210 (8%)

Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQE----VAVKRLSS----QSGQGQEEFKNEIKLIAK 527
           NF     LG G +G V+  R + G +     A+K L      Q  +  E  + E +++  
Sbjct: 1   NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEA 60

Query: 528 LQHRNLVRLLGCCIELEEKI-LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQG 586
           ++    +  L    + + K+ LI +Y+    L   L+           + VR+   IA+ 
Sbjct: 61  VRRCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREHFTE----SEVRVY--IAEI 114

Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           +L L    +L +I+RD+K  NILLD + +  ++DFG+++ F  +E + +     GT  YM
Sbjct: 115 VLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEE-RAYSFCGTIEYM 173

Query: 647 SPEYAQQGL--FSIKSDVFSFGVLLLETLS 674
           +PE  + G        D +S GVL  E L+
Sbjct: 174 APEVIRGGSGGHDKAVDWWSLGVLTFELLT 203

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 70.4 bits (172), Expect = 4e-13
 Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 23/204 (11%)

Query: 483 LGEGGFGPVYKGRL-LNGQEVAVKRLSSQ---SGQGQEEFKNEIKLIAKLQHRNLVRLLG 538
           LG+GGFG V   ++   G+  A KRL  +     +G+    NE +++ K+  + +V L  
Sbjct: 8   LGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAY 67

Query: 539 CCIELEEKILIYEYMPNKSLDFFLFDS-----TKENLLGWGTRVRIIEGIAQGLLYLHQY 593
                +   L+   M    L F +++       +E  L +         I  GL  LH+ 
Sbjct: 68  AYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAE------ILCGLEDLHRE 121

Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMA-RIFGGDELQSKTKRIVGTYGYMSPEYAQ 652
           +    ++RDLK  NILLD   + +ISD G+A +I  G+ ++ +    VGT GYM+PE   
Sbjct: 122 N---TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRGR----VGTVGYMAPEVLN 174

Query: 653 QGLFSIKSDVFSFGVLLLETLSSK 676
              +++  D +  G L+ E +  +
Sbjct: 175 NQRYTLSPDYWGLGCLIYEMIEGQ 198

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 70.4 bits (172), Expect = 4e-13
 Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 17/201 (8%)

Query: 483 LGEGGFGPV------YKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRL 536
           LG+GGFG V        G++   +++  KR+  + G+      NE +++ K+  R +V L
Sbjct: 8   LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMA--LNEKQILEKVNSRFVVSL 65

Query: 537 LGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRL 596
                  +   L+   M    L F ++    E     G  V     I  GL  LHQ    
Sbjct: 66  AYAYETKDALCLVLTLMNGGDLKFHIY-HMGEAGFEEGRAVFYAAEICCGLEDLHQE--- 121

Query: 597 RVIHRDLKASNILLDKDMNPKISDFGMA-RIFGGDELQSKTKRIVGTYGYMSPEYAQQGL 655
           R+++RDLK  NILLD   + +ISD G+A  +  G  ++ +    VGT GYM+PE  +   
Sbjct: 122 RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR----VGTVGYMAPEVVKNER 177

Query: 656 FSIKSDVFSFGVLLLETLSSK 676
           ++   D ++ G LL E ++ +
Sbjct: 178 YTFSPDWWALGCLLYEMIAGQ 198

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 70.2 bits (172), Expect = 5e-13
 Identities = 63/204 (30%), Positives = 103/204 (50%), Gaps = 26/204 (12%)

Query: 483 LGEGGFGPVYKGRLLN----GQEVAVKRLSSQSGQGQEEF--KNEIKLIAKLQHRNLVRL 536
           LG+G FG V+  R +     GQ  A+K L   + + ++    K E  ++A++ H  +V+L
Sbjct: 4   LGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKL 63

Query: 537 LGCCIELEEKI-LIYEYMPNKSLDFF----LFDSTKENLLGWGTRVRI-IEGIAQGLLYL 590
                + E K+ LI        LDF     LF    + ++     V+  +  +A  L +L
Sbjct: 64  -HYAFQTEGKLYLI--------LDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHL 114

Query: 591 HQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEY 650
           H    L +I+RDLK  NILLD++ + K++DFG+++     E   K     GT  YM+PE 
Sbjct: 115 H---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE--KKAYSFCGTVEYMAPEV 169

Query: 651 AQQGLFSIKSDVFSFGVLLLETLS 674
             +   +  +D +SFGVL+ E L+
Sbjct: 170 VNRRGHTQSADWWSFGVLMFEMLT 193

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 70.1 bits (172), Expect = 6e-13
 Identities = 64/215 (29%), Positives = 96/215 (44%), Gaps = 53/215 (24%)

Query: 483 LGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKN---EIKLIAKLQHR--NLVRL 536
           +G G  G VYK R    G  +AVK++     +  EE K    ++ ++ K  H    +V+ 
Sbjct: 23  IGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNK--EENKRILMDLDVVLK-SHDCPYIVKC 79

Query: 537 LGC---------CIELEE------KILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIE 581
            G          C+EL           I   +P             E++LG     ++  
Sbjct: 80  YGYFITDSDVFICMELMSTCLDKLLKRIQGPIP-------------EDILG-----KMTV 121

Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTK-RIV 640
            I + L YL +  +  VIHRD+K SNILLD   N K+ DFG++    G  + SK K R  
Sbjct: 122 AIVKALHYLKE--KHGVIHRDVKPSNILLDASGNVKLCDFGIS----GRLVDSKAKTRSA 175

Query: 641 GTYGYMSPEY----AQQGLFSIKSDVFSFGVLLLE 671
           G   YM+PE          + I++DV+S G+ L+E
Sbjct: 176 GCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVE 210

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 70.5 bits (172), Expect = 6e-13
 Identities = 57/200 (28%), Positives = 101/200 (50%), Gaps = 15/200 (7%)

Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQG--QEEFKNEIKLIAKLQHRNL 533
           +F   ++LG G  G V K +      +  ++L     +   + +   E++++ +     +
Sbjct: 6   DFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 65

Query: 534 VRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTK--ENLLGWGTRVRIIEGIAQGLLYLH 591
           V   G      E  +  E+M   SLD  L ++ +  E +LG   +V I   + +GL YL 
Sbjct: 66  VGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILG---KVSI--AVLRGLAYLR 120

Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYA 651
           +  + +++HRD+K SNIL++     K+ DFG++    G  + S     VGT  YMSPE  
Sbjct: 121 E--KHQIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERL 174

Query: 652 QQGLFSIKSDVFSFGVLLLE 671
           Q   +S++SD++S G+ L+E
Sbjct: 175 QGTHYSVQSDIWSMGLSLVE 194

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 70.2 bits (172), Expect = 7e-13
 Identities = 38/94 (40%), Positives = 54/94 (57%), Gaps = 9/94 (9%)

Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR--IFGGDELQSKTKRIV 640
           IA GL +LH      +I+RDLK  N++LD + + KI+DFGM +  IFGG      T+   
Sbjct: 110 IAIGLFFLHSKG---IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGK----TTRTFC 162

Query: 641 GTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           GT  Y++PE      +    D ++FGVLL E L+
Sbjct: 163 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA 196

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 69.2 bits (169), Expect = 9e-13
 Identities = 67/247 (27%), Positives = 116/247 (46%), Gaps = 43/247 (17%)

Query: 483 LGEGGFGPV------YKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRL 536
           LG+GGFG V        G++   +++  KRL  +SG+     + EI     L+  N   +
Sbjct: 1   LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEI-----LEKVNSPFI 55

Query: 537 LGCCIELEEKI---LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQ---GLLYL 590
           +      E K    L+   M    L + +++  +  L       R+I   AQ   G+L+L
Sbjct: 56  VNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGL----EMERVIHYSAQITCGILHL 111

Query: 591 HQYSRLRVIHRDLKASNILLDKDMNPKISDFGMA-RIFGGDELQSKTKRIVGTYGYMSPE 649
           H    + +++RD+K  N+LLD   N ++SD G+A  +  G   ++ T+R  GT GYM+PE
Sbjct: 112 HS---MDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG---KTITQR-AGTNGYMAPE 164

Query: 650 YAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT 709
             ++  +S   D F+ G  + E ++ +  T F +        H   + K+    EL   T
Sbjct: 165 ILKEEPYSYPVDWFAMGCSIYEMVAGR--TPFKD--------HKEKVAKE----ELKRRT 210

Query: 710 LQNEASY 716
           L++E  +
Sbjct: 211 LEDEVKF 217

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 69.3 bits (169), Expect = 1e-12
 Identities = 45/123 (36%), Positives = 71/123 (57%), Gaps = 13/123 (10%)

Query: 551 EYMPNKSLDFFLFDSTK--ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNI 608
           E+M   SLD  L  + +  E +LG   +V I   + +GL YL +  + +++HRD+K SNI
Sbjct: 83  EHMDGGSLDQVLKKAGRIPEQILG---KVSI--AVIKGLTYLRE--KHKIMHRDVKPSNI 135

Query: 609 LLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVL 668
           L++     K+ DFG++    G  + S     VGT  YMSPE  Q   +S++SD++S G+ 
Sbjct: 136 LVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLS 191

Query: 669 LLE 671
           L+E
Sbjct: 192 LVE 194

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 68.8 bits (168), Expect = 2e-12
 Identities = 61/200 (30%), Positives = 90/200 (45%), Gaps = 19/200 (9%)

Query: 483 LGEGGFGPVYKGRLL-NGQEVAVKRLSS----QSGQGQEEFKNEIKLIAKLQHRNLVRLL 537
           LG+G FG V   RL  +G+  AVK L      Q    +     +  L     H  L +L 
Sbjct: 3   LGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLY 62

Query: 538 GCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEG-IAQGLLYLHQYSRL 596
            C    +    + E++    L F +  S + +      R R     I   L++LH     
Sbjct: 63  CCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFD----EARARFYAAEITSALMFLHDKG-- 116

Query: 597 RVIHRDLKASNILLDKDMNPKISDFGMAR--IFGGDELQSKTKRIVGTYGYMSPEYAQQG 654
            +I+RDLK  N+LLD + + K++DFGM +  IF G      T    GT  Y++PE  Q+ 
Sbjct: 117 -IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG----KTTSTFCGTPDYIAPEILQEM 171

Query: 655 LFSIKSDVFSFGVLLLETLS 674
           L+    D ++ GVLL E L 
Sbjct: 172 LYGPSVDWWAMGVLLYEMLC 191

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 68.9 bits (169), Expect = 2e-12
 Identities = 59/217 (27%), Positives = 95/217 (43%), Gaps = 49/217 (22%)

Query: 483 LGEGGFGPVYKGRL-LNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRLLGC 539
           +G G +G V        G++VA+K+LS   QS    +    E++L+  + H N++ LL  
Sbjct: 23  VGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDV 82

Query: 540 CIELEEKILIYEYMPNKSLDFF--------LFDSTKENLLGW----GTRVR-IIEGIAQG 586
                       + P  SL+ F        L  +   N++         ++ ++  I +G
Sbjct: 83  ------------FTPASSLEDFQDVYLVTHLMGADLNNIVKCQKLSDDHIQFLVYQILRG 130

Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SNI +++D   KI DFG+AR         +    V T  Y 
Sbjct: 131 LKYIHS---AGIIHRDLKPSNIAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYR 182

Query: 647 SPE-------YAQQGLFSIKSDVFSFGVLLLETLSSK 676
           +PE       Y Q        D++S G ++ E L+ K
Sbjct: 183 APEIMLNWMHYNQT------VDIWSVGCIMAELLTGK 213

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 67.9 bits (166), Expect = 2e-12
 Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 15/200 (7%)

Query: 483 LGEGGFGPVYKGRL-LNGQEVAVKRLSSQ---SGQGQEEFKNEIKLIAKLQHRNLVRLLG 538
           LG+GGFG V   ++   G+  A K+L  +     +G+    NE +++ K+  R +V L  
Sbjct: 8   LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAY 67

Query: 539 CCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWG-TRVRIIEGIAQGLLYLHQYSRLR 597
                +   L+   M    L F ++     N+   G    R +   A+    L    R R
Sbjct: 68  AYETKDALCLVLTLMNGGDLKFHIY-----NMGNPGFDEERAVFYAAEITCGLEDLHRER 122

Query: 598 VIHRDLKASNILLDKDMNPKISDFGMA-RIFGGDELQSKTKRIVGTYGYMSPEYAQQGLF 656
           +++RDLK  NILLD   + +ISD G+A  I  G+ ++ +    VGT GYM+PE  +   +
Sbjct: 123 IVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRGR----VGTVGYMAPEVVKNERY 178

Query: 657 SIKSDVFSFGVLLLETLSSK 676
           +   D +  G L+ E +  K
Sbjct: 179 TFSPDWWGLGCLIYEMIEGK 198

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 68.3 bits (167), Expect = 3e-12
 Identities = 38/93 (40%), Positives = 54/93 (58%), Gaps = 9/93 (9%)

Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR--IFGGDELQSKTKRIV 640
           I  GL +LH+     +I+RDLK  N+LLDKD + KI+DFGM +  + G    + K     
Sbjct: 105 IICGLQFLHKKG---IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNG----EGKASTFC 157

Query: 641 GTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETL 673
           GT  Y++PE  +   ++   D +SFGVLL E L
Sbjct: 158 GTPDYIAPEILKGQKYNESVDWWSFGVLLYEML 190

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 68.1 bits (166), Expect = 3e-12
 Identities = 51/148 (34%), Positives = 79/148 (53%), Gaps = 10/148 (6%)

Query: 481 NKLGEGGFGPVYKGRL-LNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLL 537
           +KLGEG +  VYKGR  L    VA+K  RL  + G      + E+ L+  L+H N+V L 
Sbjct: 12  DKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIR-EVSLLKDLKHANIVTLH 70

Query: 538 GCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLR 597
                 +   L++EY+ +K L  +L D    N +        +  + +GL Y H   R +
Sbjct: 71  DIIHTEKSLTLVFEYL-DKDLKQYLDDCG--NSINMHNVKLFLFQLLRGLNYCH---RRK 124

Query: 598 VIHRDLKASNILLDKDMNPKISDFGMAR 625
           V+HRDLK  N+L+++    K++DFG+AR
Sbjct: 125 VLHRDLKPQNLLINERGELKLADFGLAR 152

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 67.7 bits (165), Expect = 3e-12
 Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 19/199 (9%)

Query: 483 LGEGGFGPV------YKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRL 536
           LG+GGFG V        G++   +++  KR+  + G+      NE +++ K+  R +V L
Sbjct: 8   LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA--LNEKRILEKVNSRFVVSL 65

Query: 537 LGCCIELEEKI-LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSR 595
                E ++ + L+   M    L F +++             R I   A+    L    R
Sbjct: 66  -AYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGF----DEQRAIFYAAELCCGLEDLQR 120

Query: 596 LRVIHRDLKASNILLDKDMNPKISDFGMA-RIFGGDELQSKTKRIVGTYGYMSPEYAQQG 654
            R+++RDLK  NILLD   + +ISD G+A +I  G+ ++ +    VGT GYM+PE     
Sbjct: 121 ERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRGR----VGTVGYMAPEVINNE 176

Query: 655 LFSIKSDVFSFGVLLLETL 673
            ++   D +  G L+ E +
Sbjct: 177 KYTFSPDWWGLGCLIYEMI 195

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 69.1 bits (169), Expect = 4e-12
 Identities = 37/99 (37%), Positives = 57/99 (57%)

Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG 644
           Q LL +H      +IHRD+K++NILL  +   K+ DFG ++++         +   GT  
Sbjct: 151 QVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPY 210

Query: 645 YMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSN 683
           Y++PE  ++  +S K+D+FS GVLL E L+ KR  D  N
Sbjct: 211 YVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN 249

Length = 496

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 67.7 bits (165), Expect = 4e-12
 Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 15/201 (7%)

Query: 481 NKLGEGGFGPVYKGRL-LNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLL 537
            KLGEG +  V+KGR  L    VA+K  RL  + G      + E+ L+  L+H N+V L 
Sbjct: 12  EKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIR-EVSLLKDLKHANIVTLH 70

Query: 538 GCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLR 597
                 +   L++EY+ +K L  ++ D    N++        +  I +GL Y H   R +
Sbjct: 71  DIVHTDKSLTLVFEYL-DKDLKQYMDDCG--NIMSMHNVKIFLYQILRGLAYCH---RRK 124

Query: 598 VIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKT-KRIVGTYGYMSPE-YAQQGL 655
           V+HRDLK  N+L+++    K++DFG+AR      + +KT    V T  Y  P+       
Sbjct: 125 VLHRDLKPQNLLINERGELKLADFGLAR---AKSVPTKTYSNEVVTLWYRPPDVLLGSSE 181

Query: 656 FSIKSDVFSFGVLLLETLSSK 676
           +S + D++  G +  E  S +
Sbjct: 182 YSTQIDMWGVGCIFFEMASGR 202

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 67.7 bits (165), Expect = 5e-12
 Identities = 63/225 (28%), Positives = 106/225 (47%), Gaps = 31/225 (13%)

Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQEV----AVKRLSS----QSGQGQEEFKNEIKLIAK 527
           NF     LG G +G V+  R + G +     A+K L      Q  +  E  + E  ++  
Sbjct: 1   NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEH 60

Query: 528 LQHRNLVRLLGCCIELEEKI-LIYEYMPNKSLDFFLF--DSTKENLLGWGTRVRIIEG-I 583
           ++    +  L    + E K+ LI +Y+    +   L+  D+  E+       VR   G I
Sbjct: 61  VRQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFSED------EVRFYSGEI 114

Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
              L +LH   +L +++RD+K  NILLD + +  ++DFG+++ F  +E + +T    GT 
Sbjct: 115 ILALEHLH---KLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEE-KERTYSFCGTI 170

Query: 644 GYMSPEYAQ-QGLFSIKSDVFSFGVLLLE--------TLSSKRNT 679
            YM+PE  + +G      D +S G+L+ E        TL  +RNT
Sbjct: 171 EYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNT 215

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 65.7 bits (160), Expect = 2e-11
 Identities = 60/199 (30%), Positives = 95/199 (47%), Gaps = 19/199 (9%)

Query: 483 LGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKN---EIKLIAKLQHRNLVRLLG 538
           LG+G FG V    L   G+  AVK L        ++ +    E +++A       +  L 
Sbjct: 3   LGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLY 62

Query: 539 CCIELEEKIL-IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEG-IAQGLLYLHQYSRL 596
           C  + +E +  + E++    L F + D  + +L     R       I  GL +LH     
Sbjct: 63  CTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLY----RATFYAAEIVCGLQFLHSKG-- 116

Query: 597 RVIHRDLKASNILLDKDMNPKISDFGMAR--IFGGDELQSKTKRIVGTYGYMSPEYAQQG 654
            +I+RDLK  N++LD+D + KI+DFGM +  +FG     ++     GT  Y++PE  Q  
Sbjct: 117 -IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG----DNRASTFCGTPDYIAPEILQGL 171

Query: 655 LFSIKSDVFSFGVLLLETL 673
            ++   D +SFGVLL E L
Sbjct: 172 KYTFSVDWWSFGVLLYEML 190

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 65.0 bits (158), Expect = 2e-11
 Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 12/210 (5%)

Query: 483 LGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEE--FKNEIKLIAKLQHRNLVRLLGC 539
           +G+G +G V   R   +G++  +K+L+ ++   +E    + E +L+++L+H N+V     
Sbjct: 8   VGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRES 67

Query: 540 CIELEEKIL--IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLR 597
             E E+ +L  +  +     L +      K  LL     V     IA  L YLH+     
Sbjct: 68  W-EGEDGLLYIVMGFCEGGDL-YHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK---H 122

Query: 598 VIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFS 657
           ++HRDLK  N+ L +    K+ D G+AR+       + T  ++GT  YMSPE      ++
Sbjct: 123 ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMAST--LIGTPYYMSPELFSNKPYN 180

Query: 658 IKSDVFSFGVLLLETLSSKRNTDFSNTNSL 687
            KSDV++ G  + E  + K   +  + NSL
Sbjct: 181 YKSDVWALGCCVYEMATLKHAFNAKDMNSL 210

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 65.0 bits (158), Expect = 2e-11
 Identities = 35/84 (41%), Positives = 53/84 (63%), Gaps = 6/84 (7%)

Query: 591 HQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEY 650
           H ++R  V++RDLK +NILLD+  + +ISD G+A  F     + K    VGT+GYM+PE 
Sbjct: 112 HMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFS----KKKPHASVGTHGYMAPEV 166

Query: 651 AQQGL-FSIKSDVFSFGVLLLETL 673
            Q+G+ +   +D FS G +L + L
Sbjct: 167 LQKGVAYDSSADWFSLGCMLFKLL 190

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

 Score = 64.5 bits (157), Expect = 2e-11
 Identities = 72/282 (25%), Positives = 125/282 (44%), Gaps = 31/282 (10%)

Query: 482 KLGEGGFGPVYKGRLLNGQEVA---VKRL-SSQSGQGQEEFKNEIKLIAKLQHRNLVRLL 537
           ++G G FG V    +     VA   VK L ++ S + Q EF  +      LQH N+++ L
Sbjct: 2   EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCL 61

Query: 538 GCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRV---RIIEGIAQGLLYLHQYS 594
           G C+E    +L++EY     L  +L  S ++        +   R+   IA G+ ++H+++
Sbjct: 62  GQCVEAIPYLLVFEYCELGDLKSYL--SQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN 119

Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARI-FGGDELQSKTKRIVGTYGYMSPEYA-- 651
            L   H DL   N  L  D+  K+ D+G+    +  D ++++  + V    +++PE    
Sbjct: 120 FL---HSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCV-PLRWLAPELVGE 175

Query: 652 -QQGLFSIK----SDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELI 706
              GL + +    S+V++ GV L E   +     +S+ +   +L H       D+  +L 
Sbjct: 176 FHGGLITAEQTKPSNVWALGVTLWELFENAAQP-YSHLSDREVLNHVI----KDQQVKLF 230

Query: 707 DPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT 748
            P L+   S     R+  V   C       R T  EV  +LT
Sbjct: 231 KPQLELPYS----ERWYEVLQFCWLS-PEKRATAEEVHRLLT 267

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 65.3 bits (159), Expect = 3e-11
 Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 19/202 (9%)

Query: 483 LGEGGFGPVYKGRLLNGQEV-AVKRLSSQSGQGQEEFK---NEIKLIAKLQHRNLVRLLG 538
           LG+G FG V    L    EV A+K L        ++      E +++A       +  L 
Sbjct: 3   LGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALH 62

Query: 539 CCIELEEKIL-IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEG-IAQGLLYLHQYSRL 596
           CC + ++++  + EY+    L F +  S K +      R R     +   L++LH++   
Sbjct: 63  CCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFD----EPRSRFYAAEVTLALMFLHRHG-- 116

Query: 597 RVIHRDLKASNILLDKDMNPKISDFGMAR--IFGGDELQSKTKRIVGTYGYMSPEYAQQG 654
            VI+RDLK  NILLD + + K++DFGM +  I  G      T    GT  Y++PE  Q+ 
Sbjct: 117 -VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG----VTTTTFCGTPDYIAPEILQEL 171

Query: 655 LFSIKSDVFSFGVLLLETLSSK 676
            +    D ++ GVL+ E ++ +
Sbjct: 172 EYGPSVDWWALGVLMYEMMAGQ 193

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 64.6 bits (157), Expect = 3e-11
 Identities = 54/158 (34%), Positives = 86/158 (54%), Gaps = 13/158 (8%)

Query: 472 AATANFSTENKLGEGGFGPVYKG-RLLNGQEVAVKRLSSQSGQGQEEFK--NEIKLIAKL 528
           AAT+  + E KLGEG +  VYKG   +NGQ VA+K +S ++ +G   F    E  L+  L
Sbjct: 3   AATSYLNLE-KLGEGSYATVYKGISRINGQLVALKVISMKTEEGVP-FTAIREASLLKGL 60

Query: 529 QHRNLVRLLGCCIELEEKI-LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGL 587
           +H N+V LL   I  +E +  ++EYM      + +       L  +  R+ + + + +GL
Sbjct: 61  KHANIV-LLHDIIHTKETLTFVFEYMHTDLAQYMI--QHPGGLHPYNVRLFMFQ-LLRGL 116

Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR 625
            Y+H      ++HRDLK  N+L+      K++DFG+AR
Sbjct: 117 AYIH---GQHILHRDLKPQNLLISYLGELKLADFGLAR 151

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 63.9 bits (155), Expect = 5e-11
 Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 18/210 (8%)

Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQEV----AVKRLSS----QSGQGQEEFKNEIKLIAK 527
           NF     LG G +G V+  R ++G +     A+K L      Q  +  E  + E +++  
Sbjct: 1   NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 60

Query: 528 LQHRNLVRLLGCCIELEEKI-LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQG 586
           ++    +  L    + + K+ LI +Y+    L  F   S +E       ++   E I   
Sbjct: 61  IRQSPFLVTLHYAFQTDTKLHLILDYINGGEL--FTHLSQRERFKEQEVQIYSGE-IVLA 117

Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L +LH   +L +I+RD+K  NILLD + +  ++DFG+++ F  DE++ +     GT  YM
Sbjct: 118 LEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVE-RAYSFCGTIEYM 173

Query: 647 SPEYAQQGL--FSIKSDVFSFGVLLLETLS 674
           +P+  + G        D +S GVL+ E L+
Sbjct: 174 APDIVRGGDGGHDKAVDWWSMGVLMYELLT 203

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 63.7 bits (155), Expect = 6e-11
 Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 16/200 (8%)

Query: 481 NKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLL 537
           ++LG+G +G VYK      G  +A+K  RL     +  +    E+ ++ K     +V   
Sbjct: 7   DELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIM-ELDILHKAVSPYIVDFY 65

Query: 538 GCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLR 597
           G         +  EYM   SLD           +      RI   + +GL +L +     
Sbjct: 66  GAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKE--EHN 123

Query: 598 VIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEY------A 651
           +IHRD+K +N+L++ +   K+ DFG++    G+ + S  K  +G   YM+PE        
Sbjct: 124 IIHRDVKPTNVLVNGNGQVKLCDFGVS----GNLVASLAKTNIGCQSYMAPERIKSGGPN 179

Query: 652 QQGLFSIKSDVFSFGVLLLE 671
           Q   ++++SDV+S G+ +LE
Sbjct: 180 QNPTYTVQSDVWSLGLSILE 199

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 63.9 bits (156), Expect = 6e-11
 Identities = 54/166 (32%), Positives = 77/166 (46%), Gaps = 48/166 (28%)

Query: 482 KLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFK-----NEIKLIAKLQHRNLVR 535
           KLGEG +  VYKGR  L GQ VA+K +  +     EE        E  L+  L+H N+V 
Sbjct: 12  KLGEGSYATVYKGRSKLTGQLVALKEIRLE----HEEGAPFTAIREASLLKDLKHANIV- 66

Query: 536 LLGCCIELEEKI-LIYEYM-----------PN----KSLDFFLFDSTKENLLGWGTRVRI 579
            L   I  ++ + L++EY+                  ++  FLF      LL        
Sbjct: 67  TLHDIIHTKKTLTLVFEYLDTDLKQYMDDCGGGLSMHNVRLFLF-----QLL-------- 113

Query: 580 IEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR 625
                +GL Y HQ    RV+HRDLK  N+L+ +    K++DFG+AR
Sbjct: 114 -----RGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLAR 151

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 64.2 bits (156), Expect = 6e-11
 Identities = 63/202 (31%), Positives = 92/202 (45%), Gaps = 25/202 (12%)

Query: 483 LGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAK------LQHRNLVR 535
           LG+G FG V+   L    Q  A+K L        ++   E  ++ K       +H  L  
Sbjct: 3   LGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDV--ECTMVEKRVLSLAWEHPFLTH 60

Query: 536 LLGCCIELEEKIL-IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEG-IAQGLLYLHQY 593
           L  C  + +E +  + EY+    L F +    K +L     R       I  GL +LH  
Sbjct: 61  LY-CTFQTKENLFFVMEYLNGGDLMFHIQSCHKFDL----PRATFYAAEIICGLQFLHSK 115

Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMAR--IFGGDELQSKTKRIVGTYGYMSPEYA 651
               +++RDLK  NILLD D + KI+DFGM +  + G     +KT    GT  Y++PE  
Sbjct: 116 G---IVYRDLKLDNILLDTDGHIKIADFGMCKENMLG----DAKTCTFCGTPDYIAPEIL 168

Query: 652 QQGLFSIKSDVFSFGVLLLETL 673
               ++   D +SFGVLL E L
Sbjct: 169 LGQKYNTSVDWWSFGVLLYEML 190

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 65.6 bits (160), Expect = 7e-11
 Identities = 63/224 (28%), Positives = 98/224 (43%), Gaps = 37/224 (16%)

Query: 482 KLGEGGFGPVYKGR-LLNGQEVAVKRLS---SQSGQGQEEFKNEIKLIAKLQHRNLVRLL 537
            +G+GG G VY     +  + VA+K++    S++   ++ F  E K+ A L H  +V + 
Sbjct: 9   LIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVY 68

Query: 538 GCCIELEEKILIYEYMPN------KSL--DFFLFDSTKENL---LGWGTRVRIIEGIAQG 586
             C    +   +Y  MP       KSL    +  +S  + L      G  + I   I   
Sbjct: 69  SIC---SDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICAT 125

Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE--------------L 632
           + Y+H  S+  V+HRDLK  NILL       I D+G A     +E               
Sbjct: 126 IEYVH--SK-GVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICY 182

Query: 633 QSKTK--RIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
            S T   +IVGT  YM+PE       S  +D+++ GV+L + L+
Sbjct: 183 SSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLT 226

Length = 932

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 63.7 bits (155), Expect = 1e-10
 Identities = 39/156 (25%), Positives = 74/156 (47%), Gaps = 13/156 (8%)

Query: 521 EIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRII 580
           E  L+  + H +++R+    +      ++   +P+ S D + + + +   L     + I 
Sbjct: 107 EAMLLQNVNHPSVIRMKDTLVSGAITCMV---LPHYSSDLYTYLTKRSRPLPIDQALIIE 163

Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR--IFGGDELQSKTKR 638
           + I +GL YLH     R+IHRD+K  NI ++      I D G A+  +     L      
Sbjct: 164 KQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLG----- 215

Query: 639 IVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           + GT    +PE   +  ++ K+D++S G++L E L+
Sbjct: 216 LAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLA 251

Length = 357

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 63.1 bits (153), Expect = 1e-10
 Identities = 67/226 (29%), Positives = 104/226 (46%), Gaps = 29/226 (12%)

Query: 464 MFSLASVSAATANFSTENKLGEGGFGPVYK-GRLLNGQEVAVKRLSSQSGQGQEEFKNEI 522
           M  L S+   T  +     +G+G +G VYK     +G   AVK L   S    EE + E 
Sbjct: 11  MLGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDV-DEEIEAEY 69

Query: 523 KLIAKL-QHRNLVRLLGCCIELEEKI-----LIYEYMPNKSLDFFLFDSTKENLLGWGTR 576
            ++  L  H N+V+  G   + ++ +     L+ E     S+   +     + LL  G R
Sbjct: 70  NILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELV-----KGLLICGQR 124

Query: 577 VR------IIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD 630
           +       I+ G   GL +LH     R+IHRD+K +NILL  +   K+ DFG++      
Sbjct: 125 LDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTST 181

Query: 631 ELQSKTKRIVGTYGYMSPEY---AQQGLFS--IKSDVFSFGVLLLE 671
            L+  T   VGT  +M+PE     QQ  +S   + DV+S G+  +E
Sbjct: 182 RLRRNTS--VGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIE 225

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 62.7 bits (152), Expect = 1e-10
 Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 6/84 (7%)

Query: 591 HQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEY 650
           H ++R  V++RDLK +NILLD+  + +ISD G+A  F     + K    VGT+GYM+PE 
Sbjct: 112 HMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFS----KKKPHASVGTHGYMAPEV 166

Query: 651 AQQGL-FSIKSDVFSFGVLLLETL 673
            Q+G  +   +D FS G +L + L
Sbjct: 167 LQKGTAYDSSADWFSLGCMLFKLL 190

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 62.3 bits (151), Expect = 1e-10
 Identities = 53/196 (27%), Positives = 94/196 (47%), Gaps = 18/196 (9%)

Query: 483 LGEGGFG-PVYKGRLLNGQEVAVKRLS-SQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCC 540
           +GEG FG  +    + + Q+ A+K +   +S    E+ + E  L+AK++H N+V      
Sbjct: 8   VGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESF 67

Query: 541 IELEEKILIYEYMPNKSLDFFLFDS-----TKENLLGWGTRVRIIEGIAQGLLYLHQYSR 595
                  ++ EY     L   +         ++ +L W  +      +  G+ ++H+   
Sbjct: 68  EADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQ------MCLGVQHIHEK-- 119

Query: 596 LRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGL 655
            RV+HRD+K+ NI L ++   K+ DFG AR+       + T   VGT  Y+ PE  +   
Sbjct: 120 -RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACT--YVGTPYYVPPEIWENMP 176

Query: 656 FSIKSDVFSFGVLLLE 671
           ++ KSD++S G +L E
Sbjct: 177 YNNKSDIWSLGCILYE 192

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 62.7 bits (153), Expect = 1e-10
 Identities = 56/203 (27%), Positives = 94/203 (46%), Gaps = 22/203 (10%)

Query: 481 NKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKN--EIKLIAKLQ-HRNLVRL 536
            K+GEG F  V K +    G+  A+K +  +  +  E+  N  EI+ + +L  H N++RL
Sbjct: 5   GKIGEGTFSEVLKAQSRKTGKYYAIKCMK-KHFKSLEQVNNLREIQALRRLSPHPNILRL 63

Query: 537 LGCCIELEEK--ILIYEYMPNKSLDFFLFDSTK--ENLLGWGTRVRIIEGIAQGLLYLHQ 592
           +    + +     L++E M     D  L++  K  +  L        +  + + L ++H 
Sbjct: 64  IEVLFDRKTGRLALVFELM-----DMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMH- 117

Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPE-YA 651
             R  + HRD+K  NIL+  D   K++DFG  R  G       T+ I  T  Y +PE   
Sbjct: 118 --RNGIFHRDIKPENILIKDD-ILKLADFGSCR--GIYSKPPYTEYI-STRWYRAPECLL 171

Query: 652 QQGLFSIKSDVFSFGVLLLETLS 674
             G +  K D+++ G +  E LS
Sbjct: 172 TDGYYGPKMDIWAVGCVFFEILS 194

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 62.8 bits (152), Expect = 2e-10
 Identities = 48/147 (32%), Positives = 76/147 (51%), Gaps = 10/147 (6%)

Query: 482 KLGEGGFGPVYKGRL-LNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLG 538
           KLGEG +  VYKG+  +NG+ VA+K  RL  + G      + E  L+  L+H N+V L  
Sbjct: 12  KLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIR-EASLLKGLKHANIVLLHD 70

Query: 539 CCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRV 598
                E   L++EY+      +   D     L     ++ + + + +GL Y+HQ     +
Sbjct: 71  IIHTKETLTLVFEYVHTDLCQYM--DKHPGGLHPENVKLFLFQ-LLRGLSYIHQRY---I 124

Query: 599 IHRDLKASNILLDKDMNPKISDFGMAR 625
           +HRDLK  N+L+      K++DFG+AR
Sbjct: 125 LHRDLKPQNLLISDTGELKLADFGLAR 151

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 62.7 bits (153), Expect = 2e-10
 Identities = 55/229 (24%), Positives = 94/229 (41%), Gaps = 57/229 (24%)

Query: 475 ANFSTENKLGEGGFGPVYKG-RLLNGQEVAVKRLSSQSGQGQEEFKN--EIKLIAKLQHR 531
           + +     +G G +G V       +G++VA+K++           +   E+K++   +H 
Sbjct: 5   SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHD 64

Query: 532 NLVRLLGCCIELEEKILIYEYMPNKSLD---FFLFDSTKENLLGWGTRVRIIEG------ 582
           N++ +          IL     P  +     + + D  + +L        II        
Sbjct: 65  NIIAIR--------DIL----RPPGADFKDVYVVMDLMESDLH------HIIHSDQPLTE 106

Query: 583 ---------IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ 633
                    + +GL Y+H  +   VIHRDLK SN+L+++D   +I DFGMAR  G     
Sbjct: 107 EHIRYFLYQLLRGLKYIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMAR--GLSSSP 161

Query: 634 SKTKRI----VGTYGYMSPEYAQQGLFSI-----KSDVFSFGVLLLETL 673
           ++ K      V T  Y +PE     L S+       D++S G +  E L
Sbjct: 162 TEHKYFMTEYVATRWYRAPEL----LLSLPEYTTAIDMWSVGCIFAEML 206

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 62.9 bits (153), Expect = 2e-10
 Identities = 39/94 (41%), Positives = 58/94 (61%), Gaps = 7/94 (7%)

Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGG-DELQSKTKRIV 640
           +A+G+ +L   SR + IHRDL A NILL ++   KI DFG+AR I+   D ++    R+ 
Sbjct: 182 VARGMEFLA--SR-KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARL- 237

Query: 641 GTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
               +M+PE     +++ +SDV+SFGVLL E  S
Sbjct: 238 -PLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFS 270

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 62.0 bits (150), Expect = 2e-10
 Identities = 46/148 (31%), Positives = 76/148 (51%), Gaps = 10/148 (6%)

Query: 481 NKLGEGGFGPVYKGRL-LNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLL 537
           +KLGEG +  V+KGR  L    VA+K  RL  + G      + E+ L+  L+H N+V L 
Sbjct: 11  DKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIR-EVSLLKNLKHANIVTLH 69

Query: 538 GCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLR 597
                     L++EY+ +   D   +     NL+        +  + +GL Y H   + +
Sbjct: 70  DIIHTERCLTLVFEYLDS---DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCH---KRK 123

Query: 598 VIHRDLKASNILLDKDMNPKISDFGMAR 625
           ++HRDLK  N+L+++    K++DFG+AR
Sbjct: 124 ILHRDLKPQNLLINEKGELKLADFGLAR 151

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|214680 smart00473, PAN_AP, divergent subfamily of APPLE domains

 Score = 56.8 bits (137), Expect = 2e-10
 Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 8/84 (9%)

Query: 336 KSGDRFIMLDDVKLPDFVEASLNESMNVKECEAECLK-NCTCRAYANSKVTGEGSGCLMW 394
           KS D F+ L + KLP F    ++   +++EC ++CL  NC+CR++  +  T    GCL+W
Sbjct: 1   KSDDCFVRLPNTKLPGFSRIVIS-VASLEECASKCLNSNCSCRSFTYNNGT---KGCLLW 56

Query: 395 -FGDLIDIRKADDRNNGQSIYIRV 417
               L D R     + G  +Y ++
Sbjct: 57  SESSLGDARLF--PSGGVDLYEKI 78

Apple-like domains present in Plasminogen, C. elegans hypothetical ORFs and the extracellular portion of plant receptor-like protein kinases. Predicted to possess protein- and/or carbohydrate-binding functions. Length = 78

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 61.7 bits (150), Expect = 4e-10
 Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 20/202 (9%)

Query: 483 LGEGGFGPVYKGRLLNGQE----VAVKRLSS----QSGQGQEEFKNEIKLIAKLQHRNLV 534
           LG+GG+G V++ R + G +     A+K L      ++ +     K E  ++  ++H  +V
Sbjct: 4   LGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIV 63

Query: 535 RLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
            L+       +  LI EY+    L   L    +E +    T    +  I+  L +LHQ  
Sbjct: 64  DLIYAFQTGGKLYLILEYLSGGELFMHL---EREGIFMEDTACFYLSEISLALEHLHQ-- 118

Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMAR--IFGGDELQSKTKRIVGTYGYMSPEYAQ 652
              +I+RDLK  NILLD   + K++DFG+ +  I  G    + T    GT  YM+PE   
Sbjct: 119 -QGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG----TVTHTFCGTIEYMAPEILM 173

Query: 653 QGLFSIKSDVFSFGVLLLETLS 674
           +       D +S G L+ + L+
Sbjct: 174 RSGHGKAVDWWSLGALMYDMLT 195

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 61.3 bits (149), Expect = 5e-10
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 52/179 (29%)

Query: 499 GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRL--------------LGCCIELE 544
            + VAVK++     Q  +    EIK+I +L H N+V++              +G   EL 
Sbjct: 30  DKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELN 89

Query: 545 EKILIYEYMPNKSLDFFLFDSTKENLLGWGT----RVRIIE-GIAQGLLYLHQYSRLRVI 599
              ++ EYM          ++   N+L  G       R+    + +GL Y+H  +   V+
Sbjct: 90  SVYIVQEYM----------ETDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSAN---VL 136

Query: 600 HRDLKASNILLD-KDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFS 657
           HRDLK +N+ ++ +D+  KI DFG+ARI                   + P Y+ +G  S
Sbjct: 137 HRDLKPANVFINTEDLVLKIGDFGLARI-------------------VDPHYSHKGYLS 176

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 61.4 bits (150), Expect = 5e-10
 Identities = 61/182 (33%), Positives = 90/182 (49%), Gaps = 25/182 (13%)

Query: 481 NKLGEGGFGPVYKGR-LLNGQEVAVKRLS---SQSGQGQEEFKNEIKLIAKL-QHRNLVR 535
            KLG+G +G V+K       + VA+K++      +   Q  F+ EI  + +L  H N+V+
Sbjct: 13  QKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFR-EIMFLQELGDHPNIVK 71

Query: 536 LLGCCIELEEKILIY---EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
           LL   I+ E    IY   EYM     +  L    + N+L    +  I+  + + L Y+H 
Sbjct: 72  LLNV-IKAENDKDIYLVFEYM-----ETDLHAVIRANILEDVHKRYIMYQLLKALKYIH- 124

Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRI-----VGTYGYMS 647
            S   VIHRDLK SNILL+ D   K++DFG+AR     EL+   +       V T  Y +
Sbjct: 125 -SG-NVIHRDLKPSNILLNSDCRVKLADFGLARSL--SELEENPENPVLTDYVATRWYRA 180

Query: 648 PE 649
           PE
Sbjct: 181 PE 182

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional

 Score = 62.0 bits (150), Expect = 6e-10
 Identities = 56/190 (29%), Positives = 90/190 (47%), Gaps = 30/190 (15%)

Query: 495 RLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE--- 551
           RL+  +  A  R + Q        +NEI  + +L H N++++        E+IL  E   
Sbjct: 194 RLIAKRVKAGSRAAIQ-------LENEILALGRLNHENILKI--------EEILRSEANT 238

Query: 552 YMPNKSLDF----FLFDST---KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLK 604
           YM  +  DF    F++D     K+  L   TR  I++ +   + Y+H     ++IHRD+K
Sbjct: 239 YMITQKYDFDLYSFMYDEAFDWKDRPLLKQTR-AIMKQLLCAVEYIHDK---KLIHRDIK 294

Query: 605 ASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFS 664
             NI L+ D    + DFG A  F   E ++     VGT    SPE      +   +D++S
Sbjct: 295 LENIFLNCDGKIVLGDFGTAMPF-EKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWS 353

Query: 665 FGVLLLETLS 674
            G++LL+ LS
Sbjct: 354 CGLILLDMLS 363

Length = 501

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 60.8 bits (147), Expect = 9e-10
 Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 5/94 (5%)

Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           IA GL +LH      +I+RDLK  N++LD + + KI+DFGM +    D + +KT    GT
Sbjct: 110 IAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKT--FCGT 164

Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
             Y++PE      +    D ++FGVLL E L+ +
Sbjct: 165 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 198

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 59.8 bits (145), Expect = 1e-09
 Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 33/209 (15%)

Query: 483 LGEGGFGPVYKGRLLN---------GQEVAVKR-LSSQSGQGQEEFKNEIKLIAKLQHRN 532
           LG+G F  +YKG L           GQEV+V   +     +    F     L+++L H++
Sbjct: 3   LGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKH 62

Query: 533 LVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
           LV+L G C+   E I++ EY+    LD FL        L W  ++ + + +A  L YL  
Sbjct: 63  LVKLYGVCVRD-ENIMVEEYVKFGPLDVFLHREKNNVSLHW--KLDVAKQLASALHYLED 119

Query: 593 YSRLRVIHRDLKASNILLDKDMNP-------KISDFGMARIFGG-DELQSKTKRIVGTYG 644
               +++H ++   NIL+ +           K+SD G+       +E   +         
Sbjct: 120 ---KKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSREERVERIP------- 169

Query: 645 YMSPEYAQQGLFSIKS--DVFSFGVLLLE 671
           +++PE  + G  S+    D +SFG  LLE
Sbjct: 170 WIAPECIRNGQASLTIAADKWSFGTTLLE 198

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 61.0 bits (148), Expect = 1e-09
 Identities = 46/176 (26%), Positives = 72/176 (40%), Gaps = 8/176 (4%)

Query: 510 QSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKEN 569
           ++  G +    EI ++  + HR ++ L+        K  +   MP    D F +      
Sbjct: 125 KAVTGGKTPGREIDILKTISHRAIINLIHA---YRWKSTVCMVMPKYKCDLFTYVDRSGP 181

Query: 570 LLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG 629
           L      + I   + + L YLH      +IHRD+K  NI LD+  N  + DFG A     
Sbjct: 182 L-PLEQAITIQRRLLEALAYLHGRG---IIHRDVKTENIFLDEPENAVLGDFGAACKLDA 237

Query: 630 DELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTN 685
                +     GT    SPE      +  K+D++S G++L E +S K  T F    
Sbjct: 238 HPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFE-MSVKNVTLFGKQV 292

Length = 392

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 60.5 bits (147), Expect = 1e-09
 Identities = 56/191 (29%), Positives = 85/191 (44%), Gaps = 40/191 (20%)

Query: 499 GQEVAVKRLSSQSGQGQEEFKN---EIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPN 555
           GQ VA+K+LS +  Q     K    E+ L+  + H+N++ LL              + P 
Sbjct: 41  GQNVAIKKLS-RPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNV------------FTPQ 87

Query: 556 KSLDFF--------LFDSTKENL-------LGWGTRVRIIEGIAQGLLYLHQYSRLRVIH 600
           KSL+ F        L D+   NL       L       ++  +  G+ +LH      +IH
Sbjct: 88  KSLEEFQDVYLVMELMDA---NLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAG---IIH 141

Query: 601 RDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKS 660
           RDLK SNI++  D   KI DFG+AR  G   +   T  +V  Y Y +PE      +    
Sbjct: 142 RDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-YRAPEVILGMGYKENV 198

Query: 661 DVFSFGVLLLE 671
           D++S G ++ E
Sbjct: 199 DIWSVGCIMGE 209

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 60.1 bits (146), Expect = 1e-09
 Identities = 48/184 (26%), Positives = 79/184 (42%), Gaps = 23/184 (12%)

Query: 498 NGQEVAVKRLSSQSGQGQEEFK---NEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMP 554
               VAVK+++  S   +E+ K    EI    +LQH N++  +   I   E  ++   M 
Sbjct: 24  TNTLVAVKKINLDS-CSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMA 82

Query: 555 NKS----LDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILL 610
             S    L     +   E  + +     I++ +   L Y+H       IHR +KAS+ILL
Sbjct: 83  YGSCEDLLKTHFPEGLPELAIAF-----ILKDVLNALDYIHS---KGFIHRSVKASHILL 134

Query: 611 DKDMNPKISDFGMAR-IFGGDELQSK----TKRIVGTYGYMSPEYAQQGL--FSIKSDVF 663
             D    +S    +  +    + Q       K  V    ++SPE  QQ L  ++ KSD++
Sbjct: 135 SGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIY 194

Query: 664 SFGV 667
           S G+
Sbjct: 195 SVGI 198

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 59.6 bits (144), Expect = 2e-09
 Identities = 36/105 (34%), Positives = 59/105 (56%), Gaps = 5/105 (4%)

Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           I+ GL +LH   R  +I+RDLK  N++LD + + KI+DFGM +    D + ++T    GT
Sbjct: 110 ISVGLFFLH---RRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRT--FCGT 164

Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSL 687
             Y++PE      +    D +++GVLL E L+ +   D  + + L
Sbjct: 165 PDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDEL 209

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 59.3 bits (143), Expect = 3e-09
 Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 3/92 (3%)

Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ +L   SR + IHRDL A NILL ++   KI DFG+AR    D    +       
Sbjct: 188 VAKGMEFLA--SR-KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLP 244

Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++I+SDV+SFGVLL E  S
Sbjct: 245 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 276

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 59.3 bits (143), Expect = 3e-09
 Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 39/225 (17%)

Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRLLGC 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++ LL  
Sbjct: 25  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 84

Query: 540 CIELEEKILIYEYMPNKSLDFF--------LFDSTKENLLGWGTRVR-----IIEGIAQG 586
                       + P +SL+ F        L  +   N++            +I  I +G
Sbjct: 85  ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 132

Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 133 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YVATRWYR 184

Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 185 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 227

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 59.3 bits (143), Expect = 3e-09
 Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 41/213 (19%)

Query: 483 LGEGGFGPV---YKGRLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRLL 537
           +G G +G V   Y  RL   Q+VAVK+LS   QS         E++L+  ++H N++ LL
Sbjct: 23  VGSGAYGSVCSAYDTRLR--QKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLL 80

Query: 538 GCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIA 584
                         + P  S++ F       NL+G      V+           +I  + 
Sbjct: 81  DV------------FTPATSIENFNEVYLVTNLMGADLNNIVKCQKLSDEHVQFLIYQLL 128

Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG 644
           +GL Y+H      +IHRDLK SN+ +++D   +I DFG+AR    DE+       V T  
Sbjct: 129 RGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQ-ADDEMTG----YVATRW 180

Query: 645 YMSPEYAQQGL-FSIKSDVFSFGVLLLETLSSK 676
           Y +PE     + ++   D++S G ++ E L  K
Sbjct: 181 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGK 213

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 59.2 bits (143), Expect = 3e-09
 Identities = 45/123 (36%), Positives = 71/123 (57%), Gaps = 13/123 (10%)

Query: 554 PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKD 613
           P ++ D +    T E+L+ +  +V      A+G+ +L   SR + IHRDL A NILL ++
Sbjct: 160 PQETDDLWKSPLTMEDLICYSFQV------ARGMEFLA--SR-KCIHRDLAARNILLSEN 210

Query: 614 MNPKISDFGMAR-IFGG-DELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
              KI DFG+AR I+   D ++  + R+     +M+PE     +++ +SDV+SFGVLL E
Sbjct: 211 NVVKICDFGLARDIYKDPDYVRKGSARL--PLKWMAPESIFDKVYTTQSDVWSFGVLLWE 268

Query: 672 TLS 674
             S
Sbjct: 269 IFS 271

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 59.4 bits (144), Expect = 3e-09
 Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 9/97 (9%)

Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           I +GL YLH      ++HRD+K  N+L++ +   KI DFG+AR+   DE +  T+ +V  
Sbjct: 112 ILRGLKYLHS---AGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQ 168

Query: 643 YGYMSPEY---AQQGLFSIKSDVFSFGVLLLETLSSK 676
           Y Y +PE    ++   ++   D++S G +  E L  +
Sbjct: 169 Y-YRAPEILMGSRH--YTSAVDIWSVGCIFAELLGRR 202

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 58.5 bits (142), Expect = 5e-09
 Identities = 58/230 (25%), Positives = 98/230 (42%), Gaps = 72/230 (31%)

Query: 483 LGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKN---------EIKLIAKLQHRN 532
           +G G +G V   +     ++VA+K++++        F N         EIKL+  L H N
Sbjct: 13  IGRGAYGIVCSAKNSETNEKVAIKKIANA-------FDNRIDAKRTLREIKLLRHLDHEN 65

Query: 533 LVRLLGCCI-----ELEEKILIYEYM---------PNKSL-----DFFLFDSTKENLLGW 573
           ++ +             +  ++YE M          +++L      +FL+          
Sbjct: 66  VIAIKDIMPPPHREAFNDVYIVYELMDTDLHQIIRSSQTLSDDHCQYFLYQ--------- 116

Query: 574 GTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ 633
                    + +GL Y+H  +   V+HRDLK SN+LL+ + + KI DFG+AR    ++  
Sbjct: 117 ---------LLRGLKYIHSAN---VLHRDLKPSNLLLNANCDLKICDFGLART-TSEKGD 163

Query: 634 SKTKRIVGTYGYMSPE-------YAQQGLFSIKSDVFSFGVLLLETLSSK 676
             T+ +V T  Y +PE       Y      +I  DV+S G +  E L  K
Sbjct: 164 FMTEYVV-TRWYRAPELLLNCSEYTT----AI--DVWSVGCIFAELLGRK 206

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 58.1 bits (140), Expect = 5e-09
 Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 14/194 (7%)

Query: 483 LGEGGFGPVYKGRLLNGQE-VAVKRLSSQSGQGQEEFKN----EIKLIAKLQHRNLVRLL 537
           +GEG +G V K R    +E VA+K+   +  +  EE K     E+K++  L+  N+V L 
Sbjct: 9   VGEGAYGVVLKCRHKETKEIVAIKKF--KDSEENEEVKETTLRELKMLRTLKQENIVELK 66

Query: 538 GCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLR 597
                  +  L++EY+    L+        E +       ++   I Q +  +H   +  
Sbjct: 67  EAFRRRGKLYLVFEYVEKNMLELL------EEMPNGVPPEKVRSYIYQLIKAIHWCHKND 120

Query: 598 VIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFS 657
           ++HRD+K  N+L+  +   K+ DFG AR        + T+  V T  Y SPE      + 
Sbjct: 121 IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTE-YVATRWYRSPELLLGAPYG 179

Query: 658 IKSDVFSFGVLLLE 671
              D++S G +L E
Sbjct: 180 KAVDMWSVGCILGE 193

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 58.3 bits (141), Expect = 6e-09
 Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 53/222 (23%)

Query: 475 ANFSTENKLGEGGFGPV----YKGRLLNGQEVAVKRLSSQS---GQGQEEFKNEIKLIAK 527
           ++F     LG G FG V    +KG    G+  A+K L  +     +  +    E  ++ +
Sbjct: 18  SDFEMGETLGTGSFGRVRIAKHKGT---GEYYAIKCLKKREILKMKQVQHVAQEKSILME 74

Query: 528 LQHRNLVRLLGCCIELEEKI-LIYEYM---------------PNKSLDFFLFDSTKENLL 571
           L H  +V ++ C  + E ++  + E++               PN    F+      E +L
Sbjct: 75  LSHPFIVNMM-CSFQDENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFY----HAELVL 129

Query: 572 GWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE 631
            +               YLH      +I+RDLK  N+LLD   + K++DFG A+     +
Sbjct: 130 AFE--------------YLHS---KDIIYRDLKPENLLLDNKGHVKVTDFGFAK-----K 167

Query: 632 LQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETL 673
           +  +T  + GT  Y++PE  Q        D ++ GVLL E +
Sbjct: 168 VPDRTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFI 209

Length = 329

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 58.5 bits (141), Expect = 6e-09
 Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 18/204 (8%)

Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQ--EVAVKRLSSQSGQGQEEFK---NEIKLIAKLQH 530
           +F+    LG G FG V      N     VA+KR        Q++     +E K++  + H
Sbjct: 31  DFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINH 90

Query: 531 RNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTK-ENLLGWGTRVRIIEGIAQGLLY 589
              V L G   +     L+ E++       FL  + +  N +G     +I+       L 
Sbjct: 91  PFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIV-------LI 143

Query: 590 LHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPE 649
                 L +++RDLK  N+LLDKD   K++DFG A++     + ++T  + GT  Y++PE
Sbjct: 144 FEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKV-----VDTRTYTLCGTPEYIAPE 198

Query: 650 YAQQGLFSIKSDVFSFGVLLLETL 673
                     +D ++ G+ + E L
Sbjct: 199 ILLNVGHGKAADWWTLGIFIYEIL 222

Length = 340

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 58.1 bits (141), Expect = 6e-09
 Identities = 58/230 (25%), Positives = 95/230 (41%), Gaps = 53/230 (23%)

Query: 483 LGEGGFGPVYKGRLLNGQEV-AVKRLSS----QSGQGQEEFKNEIKLIAKLQHRNLVRLL 537
           +G G FG V+  R  +  +V A+K L      +  Q     + E  ++A      +V+L 
Sbjct: 9   IGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAH-VRAERDILADADSPWIVKLY 67

Query: 538 GCCIELEEKI-LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEG------IAQGLLYL 590
               + EE + L+ EYMP              +L+    R  +         IA+ +L L
Sbjct: 68  -YSFQDEEHLYLVMEYMPGG------------DLMNLLIRKDVFPEETARFYIAELVLAL 114

Query: 591 HQYSRLRVIHRDLKASNILLDKDMNPKISDFGMA-------------------------R 625
               +L  IHRD+K  NIL+D D + K++DFG+                           
Sbjct: 115 DSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVL 174

Query: 626 IFGGDELQSKTKR--IVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETL 673
           +   D  Q + +    VGT  Y++PE  +   + ++ D +S GV+L E L
Sbjct: 175 VRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEML 224

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 57.8 bits (140), Expect = 7e-09
 Identities = 58/213 (27%), Positives = 90/213 (42%), Gaps = 46/213 (21%)

Query: 483 LGEGGFGPV----YKGRLLNGQEVAVKRLSSQSGQGQEEF------KNEIKLIAKLQHRN 532
           LG G FG V    YK     G+  A+K L       ++E       K   +     +H  
Sbjct: 7   LGRGHFGKVLLAEYKK---TGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPF 63

Query: 533 LVRLLGCCIELEEKI-LIYEYMPNKSL------DFFLFDSTKENLLGWGTRVRIIEGIAQ 585
           LV L   C + E+ +  + EY     L      D F             +  R +   A 
Sbjct: 64  LVNLF-ACFQTEDHVCFVMEYAAGGDLMMHIHTDVF-------------SEPRAVFYAAC 109

Query: 586 ---GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR--IFGGDELQSKTKRIV 640
              GL YLH+    ++++RDLK  N+LLD +   KI+DFG+ +  +  GD    +T    
Sbjct: 110 VVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGD----RTSTFC 162

Query: 641 GTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETL 673
           GT  +++PE   +  ++   D +  GVL+ E L
Sbjct: 163 GTPEFLAPEVLTETSYTRAVDWWGLGVLIYEML 195

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 57.3 bits (138), Expect = 1e-08
 Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 17/201 (8%)

Query: 483 LGEGGFGPV-YKGRLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRLLGC 539
           +G G +G V        G +VA+K+L    QS    +    E++L+  ++H N++ LL  
Sbjct: 23  VGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDV 82

Query: 540 C---IELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRL 596
               + L+     Y  MP    D  L    K   L       ++  + +GL Y+H     
Sbjct: 83  FTPDLSLDRFHDFYLVMPFMGTD--LGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAAG-- 138

Query: 597 RVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGL- 655
            +IHRDLK  N+ +++D   KI DFG+AR     +  S+    V T  Y +PE     + 
Sbjct: 139 -IIHRDLKPGNLAVNEDCELKILDFGLAR-----QTDSEMTGYVVTRWYRAPEVILNWMH 192

Query: 656 FSIKSDVFSFGVLLLETLSSK 676
           ++   D++S G ++ E L+ K
Sbjct: 193 YTQTVDIWSVGCIMAEMLTGK 213

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 57.0 bits (137), Expect = 1e-08
 Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 24/224 (10%)

Query: 482 KLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQG-QEEFKNEIKLIAKLQHRNLVRLLGCC 540
           K+G G +G VYK +  +G++     L    G G       EI L+ +L+H N++ L    
Sbjct: 8   KVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVF 67

Query: 541 IELEEK--ILIYEYMPNKSLDFFLFD-STKENLLGWGTRVRIIEGIAQGLLY-----LHQ 592
           +   ++   L+++Y  +       F  ++K N       V++  G+ + LLY     +H 
Sbjct: 68  LSHADRKVWLLFDYAEHDLWHIIKFHRASKAN----KKPVQLPRGMVKSLLYQILDGIHY 123

Query: 593 YSRLRVIHRDLKASNILL----DKDMNPKISDFGMARIFGGD-ELQSKTKRIVGTYGYMS 647
                V+HRDLK +NIL+     +    KI+D G AR+F    +  +    +V T+ Y +
Sbjct: 124 LHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRA 183

Query: 648 PEYAQQGLFSIKS-DVFSFGVLLLETLSSK-----RNTDFSNTN 685
           PE         K+ D+++ G +  E L+S+     R  D   +N
Sbjct: 184 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSN 227

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 56.3 bits (136), Expect = 1e-08
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 55/212 (25%)

Query: 486 GGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELE 544
           G FG VY  +    G   A+K L                +IAK Q  N+        + E
Sbjct: 7   GAFGSVYLAKKRSTGDYFAIKVLKKSD------------MIAKNQVTNV--------KAE 46

Query: 545 EKILIYE-YMPNKSLDFFLFDSTKENLL---------GWGTRVRIIEGIAQ--------- 585
             I++ +   P  +  ++ F S K+ L             + ++ + G+ +         
Sbjct: 47  RAIMMIQGESPYVAKLYYSFQS-KDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAE 105

Query: 586 ---GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
              G+  LHQ     +IHRD+K  N+L+D+  + K++DFG++R   G E     K+ VGT
Sbjct: 106 VVLGVEDLHQRG---IIHRDIKPENLLIDQTGHLKLTDFGLSRN--GLE----NKKFVGT 156

Query: 643 YGYMSPEYAQQGLFSIK-SDVFSFGVLLLETL 673
             Y++PE    G+   K SD +S G ++ E L
Sbjct: 157 PDYLAPE-TILGVGDDKMSDWWSLGCVIFEFL 187

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 56.4 bits (136), Expect = 1e-08
 Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 28/209 (13%)

Query: 483 LGEGGFGPVYKG--------RLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
           LG+G F  ++KG          L+  EV +K L        E F     ++++L H++LV
Sbjct: 3   LGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLV 62

Query: 535 RLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
              G C+  +E I++ EY+   SLD +L     +NL+    ++ + + +A  L +L    
Sbjct: 63  LNYGVCVCGDESIMVQEYVKFGSLDTYL--KKNKNLINISWKLEVAKQLAWALHFLEDKG 120

Query: 595 RLRVIHRDLKASNILL-----DKDMNP---KISDFGMARIFGGDELQSKTKRIVGTYGYM 646
              + H ++ A N+LL      K  NP   K+SD G++      E+    +RI     ++
Sbjct: 121 ---LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPKEIL--LERI----PWV 171

Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLS 674
            PE  +     S+ +D +SFG  L E  S
Sbjct: 172 PPECIENPQNLSLAADKWSFGTTLWEIFS 200

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 56.6 bits (136), Expect = 2e-08
 Identities = 68/265 (25%), Positives = 116/265 (43%), Gaps = 41/265 (15%)

Query: 482 KLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQG-QEEFKNEIKLIAKLQHRNLVRLLGCC 540
           K+G G +G VYK +  +G++     L    G G       EI L+ +L+H N++ L    
Sbjct: 8   KVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVF 67

Query: 541 IELEEK--ILIYEYMPNKSLDFFLFD-STKEN----LLGWGTRVRIIEGIAQGLLYLHQY 593
           +   ++   L+++Y  +       F  ++K N     L       ++  I  G+ YLH  
Sbjct: 68  LSHSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN 127

Query: 594 SRLRVIHRDLKASNILL----DKDMNPKISDFGMARIFGGD-ELQSKTKRIVGTYGYMSP 648
               V+HRDLK +NIL+     +    KI+D G AR+F    +  +    +V T+ Y +P
Sbjct: 128 ---WVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAP 184

Query: 649 EYAQQGLFSIKS-DVFSFGVLLLETLSSK-----RNTDFSNTNS---------LTLLGHA 693
           E         K+ D+++ G +  E L+S+     R  D   +N           +++G  
Sbjct: 185 ELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMG-- 242

Query: 694 WDLWKDDRAWELID-----PTLQNE 713
              +  D+ WE I      PTLQ +
Sbjct: 243 ---FPADKDWEDIRKMPEYPTLQKD 264

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 55.9 bits (134), Expect = 3e-08
 Identities = 55/199 (27%), Positives = 92/199 (46%), Gaps = 14/199 (7%)

Query: 483 LGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKN---EIKLIAKLQHRNLVRLLG 538
           LG+G FG V   R   +G+  A+K L  +    ++E  +   E +++   +H  L  L  
Sbjct: 3   LGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKY 62

Query: 539 CCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEG-IAQGLLYLHQYSRLR 597
                +    + EY+    L F L   ++E +     R R     I   L YLH     +
Sbjct: 63  SFQTKDRLCFVMEYVNGGELFFHL---SRERVFS-EDRTRFYGAEIVSALDYLHSG---K 115

Query: 598 VIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFS 657
           +++RDLK  N++LDKD + KI+DFG+ +    D    KT    GT  Y++PE  +   + 
Sbjct: 116 IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKT--FCGTPEYLAPEVLEDNDYG 173

Query: 658 IKSDVFSFGVLLLETLSSK 676
              D +  GV++ E +  +
Sbjct: 174 RAVDWWGLGVVMYEMMCGR 192

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 55.7 bits (134), Expect = 4e-08
 Identities = 56/206 (27%), Positives = 90/206 (43%), Gaps = 28/206 (13%)

Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRLLG- 538
           +G G +G V        G++VA+K+LS   QS    +    E+ L+  +QH N++ LL  
Sbjct: 23  VGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDV 82

Query: 539 --CCIELEEKILIYEYMPNKSLDF-----FLFDSTKENLLGWGTRVRIIEGIAQGLLYLH 591
               +  +E    Y  MP    D            K   L        +  +  GL Y+H
Sbjct: 83  FTSAVSGDEFQDFYLVMPYMQTDLQKIMGHPLSEDKVQYL--------VYQMLCGLKYIH 134

Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYA 651
                 +IHRDLK  N+ +++D   KI DFG+AR        ++    V T  Y +PE  
Sbjct: 135 SAG---IIHRDLKPGNLAVNEDCELKILDFGLAR-----HADAEMTGYVVTRWYRAPEVI 186

Query: 652 QQGLFSIKS-DVFSFGVLLLETLSSK 676
              +   ++ D++S G ++ E L+ K
Sbjct: 187 LNWMHYNQTVDIWSVGCIMAEMLTGK 212

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 55.1 bits (133), Expect = 6e-08
 Identities = 38/101 (37%), Positives = 50/101 (49%), Gaps = 14/101 (13%)

Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF--GGDELQSKTKRIV 640
           I  GL Y+H  +   V+HRDLK  N+L++ D   KI DFG+AR F     E        V
Sbjct: 114 ILCGLKYIHSAN---VLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYV 170

Query: 641 GTYGYMSPEYAQQGLFSIKS-----DVFSFGVLLLETLSSK 676
            T  Y +PE     + S +S     DV+S G +L E L  K
Sbjct: 171 ATRWYRAPEI----MLSFQSYTKAIDVWSVGCILAELLGRK 207

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 55.0 bits (132), Expect = 6e-08
 Identities = 57/196 (29%), Positives = 90/196 (45%), Gaps = 13/196 (6%)

Query: 483 LGEGGFGPVY-KGRLLNGQEVAVKRLSSQSGQGQEEFKNEIK----LIAKLQHRNLVRLL 537
           +G+G FG V    R  +G   AVK L  ++   ++E  + +     L+  L+H  LV L 
Sbjct: 3   IGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLH 62

Query: 538 GCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLR 597
                 E+   + +Y+    L F L    +   L    R    E +A  + YLH    L 
Sbjct: 63  YSFQTAEKLYFVLDYVNGGELFFHL--QRERCFLEPRARFYAAE-VASAIGYLHS---LN 116

Query: 598 VIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFS 657
           +I+RDLK  NILLD   +  ++DFG+ +   G E +  T    GT  Y++PE  ++  + 
Sbjct: 117 IIYRDLKPENILLDSQGHVVLTDFGLCK--EGVEPEETTSTFCGTPEYLAPEVLRKEPYD 174

Query: 658 IKSDVFSFGVLLLETL 673
              D +  G +L E L
Sbjct: 175 RTVDWWCLGAVLYEML 190

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 55.2 bits (133), Expect = 7e-08
 Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 21/105 (20%)

Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR---------IFGGDELQ 633
           +AQG+ +L   +    IHRD+ A N+LL      KI DFG+AR         + G   L 
Sbjct: 221 VAQGMDFL---ASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLP 277

Query: 634 SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRN 678
            K         +M+PE     +++++SDV+S+G+LL E  S  ++
Sbjct: 278 VK---------WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKS 313

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional

 Score = 54.4 bits (131), Expect = 8e-08
 Identities = 49/196 (25%), Positives = 88/196 (44%), Gaps = 22/196 (11%)

Query: 491 VYKGRLLNGQEVAVKRL---SSQSGQGQEEFKNEIKLIAKLQHRNLVRLLG----CCIEL 543
           +YKG   N +EV ++             +  +NEIK + ++   N++++ G       +L
Sbjct: 36  IYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDL 94

Query: 544 EEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDL 603
               LI EY     L   L    KE  L + T++ +     +GL  L++Y+     +++L
Sbjct: 95  PRLSLILEYCTRGYLREVL---DKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKP--YKNL 149

Query: 604 KASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFS---IKS 660
            + + L+ ++   KI   G+ +I     L S   + V    Y S +     +FS   IK 
Sbjct: 150 TSVSFLVTENYKLKIICHGLEKI-----LSSPPFKNVNFMVYFSYKMLND-IFSEYTIKD 203

Query: 661 DVFSFGVLLLETLSSK 676
           D++S GV+L E  + K
Sbjct: 204 DIYSLGVVLWEIFTGK 219

Length = 283

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 54.9 bits (132), Expect = 8e-08
 Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 3/92 (3%)

Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ +L   +    IHRDL A NILL      KI DFG+AR    D            
Sbjct: 223 VAKGMSFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLP 279

Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++ +SDV+S+G+LL E  S
Sbjct: 280 VKWMAPESIFNCVYTFESDVWSYGILLWEIFS 311

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 54.7 bits (131), Expect = 9e-08
 Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 17/210 (8%)

Query: 483 LGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEF---KNEIKLIAKLQHRNLVRLLG 538
           +G G +  V   RL  N Q  A+K +  +     E+    + E  +  +      +  L 
Sbjct: 3   IGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLH 62

Query: 539 CCIELEEKI-LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLR 597
            C +   ++ L+ EY+    L F +    +  L     R    E I   L +LH+     
Sbjct: 63  SCFQTTSRLFLVIEYVNGGDLMFHM--QRQRKLPEEHARFYAAE-ICIALNFLHERG--- 116

Query: 598 VIHRDLKASNILLDKDMNPKISDFGMAR--IFGGDELQSKTKRIVGTYGYMSPEYAQQGL 655
           +I+RDLK  N+LLD D + K++D+GM +  +  GD     T    GT  Y++PE  +   
Sbjct: 117 IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGD----TTSTFCGTPNYIAPEILRGEE 172

Query: 656 FSIKSDVFSFGVLLLETLSSKRNTDFSNTN 685
           +    D ++ GVL+ E ++ +   D    N
Sbjct: 173 YGFSVDWWALGVLMFEMMAGRSPFDIITDN 202

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 54.3 bits (130), Expect = 9e-08
 Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 4/94 (4%)

Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           I   L YLH  S   V++RDLK  N++LDKD + KI+DFG+ +   G +  +  K   GT
Sbjct: 104 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGT 159

Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
             Y++PE  +   +    D +  GV++ E +  +
Sbjct: 160 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 193

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 54.4 bits (131), Expect = 1e-07
 Identities = 59/202 (29%), Positives = 88/202 (43%), Gaps = 22/202 (10%)

Query: 483 LGEGGFGPVYKGRLLNGQEV-AVKRLSSQSGQGQEE---FKNEIKLIAKLQHRNLVRLLG 538
           +G G FG V   R  + ++V A+K LS      + +   F  E  ++A      +V+L  
Sbjct: 51  IGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQL-- 108

Query: 539 CCIELEEKIL--IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRL 596
                ++K L  + EYMP    D     S  +    W  R    E +   L  +H     
Sbjct: 109 HYAFQDDKYLYMVMEYMPGG--DLVNLMSNYDIPEKW-ARFYTAE-VVLALDAIHSMG-- 162

Query: 597 RVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL-QSKTKRIVGTYGYMSPEY----A 651
             IHRD+K  N+LLDK  + K++DFG       + + +  T   VGT  Y+SPE      
Sbjct: 163 -FIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRCDTA--VGTPDYISPEVLKSQG 219

Query: 652 QQGLFSIKSDVFSFGVLLLETL 673
             G +  + D +S GV L E L
Sbjct: 220 GDGYYGRECDWWSVGVFLYEML 241

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 54.0 bits (130), Expect = 1e-07
 Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 9/93 (9%)

Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR--IFGGDELQSKTKRIV 640
           I   L YLH      V++RDLK  N++LDKD + KI+DFG+ +  I  G       K   
Sbjct: 104 IVSALGYLH---SCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGA----TMKTFC 156

Query: 641 GTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETL 673
           GT  Y++PE  +   +    D +  GV++ E +
Sbjct: 157 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 189

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 53.9 bits (129), Expect = 1e-07
 Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 5/94 (5%)

Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           I   L YLH      V++RD+K  N++LDKD + KI+DFG+ +    D    KT    GT
Sbjct: 104 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGT 158

Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
             Y++PE  +   +    D +  GV++ E +  +
Sbjct: 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 192

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 53.5 bits (128), Expect = 1e-07
 Identities = 61/207 (29%), Positives = 94/207 (45%), Gaps = 29/207 (14%)

Query: 483 LGEGGFGPVYK-GRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQ-HRNLVRLLGCC 540
           +G+G +G V+K     NG + AVK L        EE + E  ++  L  H N+V+  G  
Sbjct: 26  IGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMY 84

Query: 541 IELEEKI-----LIYEYMPNKSLDFFLFDSTKENLLGWGTRVR------IIEGIAQGLLY 589
            + + K      L+ E     S+     D  K   L  G R+       I+     GL +
Sbjct: 85  YKKDVKNGDQLWLVLELCNGGSVT----DLVK-GFLKRGERMEEPIIAYILHEALMGLQH 139

Query: 590 LHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPE 649
           LH     + IHRD+K +NILL  +   K+ DFG++       L+  T   VGT  +M+PE
Sbjct: 140 LHVN---KTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTS--VGTPFWMAPE 194

Query: 650 Y--AQQGL---FSIKSDVFSFGVLLLE 671
               +Q L   +  + DV+S G+  +E
Sbjct: 195 VIACEQQLDSTYDARCDVWSLGITAIE 221

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 53.6 bits (129), Expect = 2e-07
 Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 8/97 (8%)

Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMA-RIFGGDELQSKTKRIVG 641
           +A+ +L +    +L  +HRD+K  N+LLDK+ + +++DFG   R+     +QS     VG
Sbjct: 108 LAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVA--VG 165

Query: 642 TYGYMSPEYAQ-----QGLFSIKSDVFSFGVLLLETL 673
           T  Y+SPE  Q     +G +  + D +S GV + E L
Sbjct: 166 TPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEML 202

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 53.5 bits (128), Expect = 2e-07
 Identities = 51/182 (28%), Positives = 82/182 (45%), Gaps = 22/182 (12%)

Query: 499 GQEVAVKRLSSQSGQGQEEFKN---EIKLIAKLQHRNLVRLLGCCI------ELEEKILI 549
           G  VAVK+LS +  Q Q   K    E+ L+  + H+N++ LL          E ++  L+
Sbjct: 46  GINVAVKKLS-RPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLV 104

Query: 550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNIL 609
            E M          +   E +        ++  +  G+ +LH      +IHRDLK SNI+
Sbjct: 105 MELMDANLCQVIHMELDHERM------SYLLYQMLCGIKHLHSAG---IIHRDLKPSNIV 155

Query: 610 LDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLL 669
           +  D   KI DFG+AR    + +   T  +V  Y Y +PE      +    D++S G ++
Sbjct: 156 VKSDCTLKILDFGLARTACTNFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIM 212

Query: 670 LE 671
            E
Sbjct: 213 GE 214

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 54.3 bits (130), Expect = 2e-07
 Identities = 43/159 (27%), Positives = 78/159 (49%), Gaps = 2/159 (1%)

Query: 519 KNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVR 578
           ++E+  +A   H  +V+        ++ +LI EY     L+  +    KE+L      V 
Sbjct: 113 RSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVG 172

Query: 579 IIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKR 638
           ++    Q +L L +    +++HRDLK++NI L      K+ DFG ++ +           
Sbjct: 173 LL--FYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASS 230

Query: 639 IVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKR 677
             GT  Y++PE  ++  +S K+D++S GV+L E L+  R
Sbjct: 231 FCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHR 269

Length = 478

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 53.1 bits (127), Expect = 2e-07
 Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 13/196 (6%)

Query: 483 LGEGGFGPVY-KGRLLNGQEVAVKRLSSQSGQGQEEFKNEIK----LIAKLQHRNLVRLL 537
           +G+G FG V    R L+G+  AVK L  +    ++E K+ +     L+  ++H  LV L 
Sbjct: 3   IGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLH 62

Query: 538 GCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLR 597
                 E+   + +++    L F L    +E              IA  L YLH    + 
Sbjct: 63  YSFQTTEKLYFVLDFVNGGELFFHL---QRERSFPEPRARFYAAEIASALGYLHS---IN 116

Query: 598 VIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFS 657
           +++RDLK  NILLD   +  ++DFG+ +   G      T    GT  Y++PE  ++  + 
Sbjct: 117 IVYRDLKPENILLDSQGHVVLTDFGLCK--EGIAQSDTTTTFCGTPEYLAPEVIRKQPYD 174

Query: 658 IKSDVFSFGVLLLETL 673
              D +  G +L E L
Sbjct: 175 NTVDWWCLGAVLYEML 190

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 53.1 bits (127), Expect = 3e-07
 Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 8/97 (8%)

Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD-ELQSKTKRIVG 641
           IA+ +L +H   +L  +HRD+K  N+LLD + + +++DFG       D  +QS     VG
Sbjct: 108 IAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVA--VG 165

Query: 642 TYGYMSPEYAQ-----QGLFSIKSDVFSFGVLLLETL 673
           T  Y+SPE  Q      G +  + D +S GV + E L
Sbjct: 166 TPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEML 202

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 52.8 bits (126), Expect = 3e-07
 Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 5/98 (5%)

Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           I+  L YLH+     +I+RDLK  N+LLD + + K++D+GM +   G      T    GT
Sbjct: 105 ISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSTFCGT 159

Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTD 680
             Y++PE  +   +    D ++ GVL+ E ++ +   D
Sbjct: 160 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 197

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 52.6 bits (126), Expect = 3e-07
 Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 2/92 (2%)

Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
            A+ L  L    +  VI+RDLK  NILLD   +  + DFG+ ++   D+   KT    GT
Sbjct: 99  TAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD--DKTNTFCGT 156

Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             Y++PE      ++   D ++ GVLL E L+
Sbjct: 157 PEYLAPELLLGHGYTKAVDWWTLGVLLYEMLT 188

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 52.5 bits (126), Expect = 3e-07
 Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 9/100 (9%)

Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR--IFGGDELQSKTKRIV 640
           I+  L +LH+     +I+RDLK  N+LLD + + K++D+GM +  I  GD     T    
Sbjct: 105 ISLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGD----TTSTFC 157

Query: 641 GTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTD 680
           GT  Y++PE  +   +    D ++ GVL+ E ++ +   D
Sbjct: 158 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 197

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 52.7 bits (126), Expect = 4e-07
 Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 3/92 (3%)

Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ +L   +    +HRDL A N+LL +    KI DFG+AR    D            
Sbjct: 246 VARGMEFL---ASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLP 302

Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     L++  SDV+S+G+LL E  S
Sbjct: 303 VKWMAPESIFDNLYTTLSDVWSYGILLWEIFS 334

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 53.6 bits (128), Expect = 4e-07
 Identities = 63/243 (25%), Positives = 104/243 (42%), Gaps = 44/243 (18%)

Query: 482 KLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKN---EIKLIAKLQHRNLVRLLG 538
           K+G G FG V+  +    QE    +  S  G  + E      E+ ++ +L+H+N+VR + 
Sbjct: 20  KIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYID 79

Query: 539 CCIELEEKIL--IYEYMPNKSLD------FFLFDSTKENLLGWGTRVRIIEGIAQGLLYL 590
             +    + L  + E+     L       + +F   +E+ +     V I   +   L Y 
Sbjct: 80  RFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAI-----VDITRQLLHALAYC 134

Query: 591 HQY----SRLRVIHRDLKASNILLD-------------KDMN----PKISDFGMARIFGG 629
           H      +  RV+HRDLK  NI L               ++N     KI DFG+++  G 
Sbjct: 135 HNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIG- 193

Query: 630 DELQSKTKRIVGTYGYMSPEYA--QQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSL 687
             ++S     VGT  Y SPE    +   +  KSD+++ G ++ E  S K  T F   N+ 
Sbjct: 194 --IESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGK--TPFHKANNF 249

Query: 688 TLL 690
           + L
Sbjct: 250 SQL 252

Length = 1021

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 52.5 bits (126), Expect = 4e-07
 Identities = 56/198 (28%), Positives = 90/198 (45%), Gaps = 15/198 (7%)

Query: 483 LGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIK----LIAKLQHRNLVRLL 537
           +G+G FG V   +   +G+  AVK L  ++   ++E K+ +     L+  ++H  LV L 
Sbjct: 3   IGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLH 62

Query: 538 GCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEG-IAQGLLYLHQYSRL 596
                 ++   + +Y+    L FF     +        R R     IA  L YLH    L
Sbjct: 63  YSFQTADKLYFVLDYVNGGEL-FFHLQRERSFP---EPRARFYAAEIASALGYLHS---L 115

Query: 597 RVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLF 656
            +I+RDLK  NILLD   +  ++DFG+ +   G E    T    GT  Y++PE  ++  +
Sbjct: 116 NIIYRDLKPENILLDSQGHVVLTDFGLCK--EGIEHSKTTSTFCGTPEYLAPEVLRKQPY 173

Query: 657 SIKSDVFSFGVLLLETLS 674
               D +  G +L E L 
Sbjct: 174 DRTVDWWCLGAVLYEMLY 191

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 52.4 bits (125), Expect = 4e-07
 Identities = 51/186 (27%), Positives = 84/186 (45%), Gaps = 22/186 (11%)

Query: 500 QEVAVKRLSSQSGQGQEEFKN---EIKLIAKLQHRNLVRLLGCCI------ELEEKILIY 550
           + VA+K+LS +  Q Q   K    E+ L+  + H+N++ LL          E ++  L+ 
Sbjct: 43  RNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVM 101

Query: 551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILL 610
           E M          +   E +        ++  +  G+ +LH      +IHRDLK SNI++
Sbjct: 102 ELMDANLCQVIQMELDHERM------SYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVV 152

Query: 611 DKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLL 670
             D   KI DFG+AR  G   +   T  +V  Y Y +PE      +    D++S G ++ 
Sbjct: 153 KSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMG 209

Query: 671 ETLSSK 676
           E +  K
Sbjct: 210 EMVRHK 215

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|240159 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

 Score = 49.7 bits (119), Expect = 6e-07
 Identities = 33/147 (22%), Positives = 60/147 (40%), Gaps = 15/147 (10%)

Query: 482 KLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV--RLLGC 539
            L  G    VY       ++  +K   S+  +   + + E+ ++  L  + L   ++L  
Sbjct: 5   LLKGGLTNRVYLLGT-KDEDYVLKINPSR--EKGADREREVAILQLLARKGLPVPKVLAS 61

Query: 540 CIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                   L+ E++  ++LD    + ++E       +  I E +A+ L  LHQ   L + 
Sbjct: 62  GESDGWSYLLMEWIEGETLD----EVSEEE------KEDIAEQLAELLAKLHQLPLLVLC 111

Query: 600 HRDLKASNILLDKDMNPKISDFGMARI 626
           H DL   NIL+D      I D+  A  
Sbjct: 112 HGDLHPGNILVDDGKILGIIDWEYAGY 138

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. Length = 155

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 51.4 bits (123), Expect = 9e-07
 Identities = 62/253 (24%), Positives = 108/253 (42%), Gaps = 67/253 (26%)

Query: 476 NFSTENKLGEGGFGPVYKGRLL----NGQEVAVKRLSSQSGQGQEEF---KNEIKLIAKL 528
           +F T   +G+G FG V   RL+     G+  A+K L       +++    K E  ++A+ 
Sbjct: 2   DFHTVKVIGKGAFGEV---RLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAES 58

Query: 529 QHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFL--FDSTKENLLGWGTRVRIIEGIAQG 586
               +V L     + +   LI E++P   L   L  +D+  E++    TR  + E +   
Sbjct: 59  DSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDTFSEDV----TRFYMAECV--- 111

Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMA-------------RIFGGDELQ 633
            L +    +L  IHRD+K  NIL+D+  + K+SDFG++             ++  G   +
Sbjct: 112 -LAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNK 170

Query: 634 S---------------------------KTKRI-----VGTYGYMSPE-YAQQGLFSIKS 660
           +                           K +R+     VGT  Y++PE + QQG +  + 
Sbjct: 171 NRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQG-YGQEC 229

Query: 661 DVFSFGVLLLETL 673
           D +S G ++ E L
Sbjct: 230 DWWSLGAIMFECL 242

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 51.6 bits (123), Expect = 1e-06
 Identities = 57/202 (28%), Positives = 90/202 (44%), Gaps = 22/202 (10%)

Query: 483 LGEGGFGPVYKGRLLNGQEVAVKRLSSQ---SGQGQEEFKNEIKLIAKLQHRNLVRLLGC 539
           +G G FG V   R  + Q+V   +L S+     +    F  E + I    +   V  L C
Sbjct: 51  IGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFC 110

Query: 540 CIELEEKI-LIYEYMPNKSLDFFL--FDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRL 596
             + ++ + ++ EYMP   L   +  +D  ++    W          A+ +L L     +
Sbjct: 111 AFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEK----WAKFY-----TAEVVLALDAIHSM 161

Query: 597 RVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL-QSKTKRIVGTYGYMSPEYAQQ-- 653
            +IHRD+K  N+LLDK  + K++DFG       DE    +    VGT  Y+SPE  +   
Sbjct: 162 GLIHRDVKPDNMLLDKHGHLKLADFGTCMKM--DETGMVRCDTAVGTPDYISPEVLKSQG 219

Query: 654 --GLFSIKSDVFSFGVLLLETL 673
             G +  + D +S GV L E L
Sbjct: 220 GDGYYGRECDWWSVGVFLFEML 241

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 51.2 bits (122), Expect = 1e-06
 Identities = 63/238 (26%), Positives = 99/238 (41%), Gaps = 40/238 (16%)

Query: 458 RDSWFPMFSLA-SVSAATANFSTENKLGEGGFGPV---YKGRLLNGQEVAVKRLSSQSGQ 513
           RD+ F    +  S       +     +G G  G V   Y   L   + VA+K+LS +  Q
Sbjct: 6   RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLS-RPFQ 62

Query: 514 GQEEFKN---EIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFF-----LFDS 565
            Q   K    E+ L+  + H+N++ LL              + P KSL+ F     + + 
Sbjct: 63  NQTHAKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMEL 110

Query: 566 TKENL-------LGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKI 618
              NL       L       ++  +  G+ +LH      +IHRDLK SNI++  D   KI
Sbjct: 111 MDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKI 167

Query: 619 SDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
            DFG+AR  G   +   T  +V  Y Y +PE      +    D++S G ++ E +   
Sbjct: 168 LDFGLARTAGTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 222

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 50.5 bits (121), Expect = 1e-06
 Identities = 61/228 (26%), Positives = 95/228 (41%), Gaps = 64/228 (28%)

Query: 483 LGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKN---------EIKLIAKLQHRN 532
           +G+G +G V        G++VA+K++        + F++         EIKL+  L+H +
Sbjct: 8   IGKGSYGVVCSAIDTHTGEKVAIKKI-------NDVFEHVSDATRILREIKLLRLLRHPD 60

Query: 533 LVRLLGCCI-----ELEEKILIYEYM---------PNKSL-----DFFLFDSTKENLLGW 573
           +V +    +     E ++  +++E M          N  L      FFL+      LL  
Sbjct: 61  IVEIKHIMLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHHQFFLY-----QLL-- 113

Query: 574 GTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARI-FGGDEL 632
                      + L Y+H  +   V HRDLK  NIL + D   KI DFG+AR+ F     
Sbjct: 114 -----------RALKYIHTAN---VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 159

Query: 633 QSKTKRIVGTYGYMSPEYAQQGLFSIKS----DVFSFGVLLLETLSSK 676
                  V T  Y +PE    G F  K     D++S G +  E L+ K
Sbjct: 160 AIFWTDYVATRWYRAPELC--GSFFSKYTPAIDIWSIGCIFAEVLTGK 205

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 50.6 bits (121), Expect = 1e-06
 Identities = 53/224 (23%), Positives = 99/224 (44%), Gaps = 24/224 (10%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEE---FKNEIKLIAKLQHR 531
           +F  ++ +G G FG V   R    G   A+K +       QE    F+ E  +++     
Sbjct: 2   DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSP 61

Query: 532 NLVRLLGCCIELEEKILIYEYMPNKSLDFFL---FDSTKENLLGWGTRVRIIEGIAQGLL 588
            + +L     + +   L+ EY P   L   L    D   E++       +    +A+ +L
Sbjct: 62  WIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDM------AQFY--LAELVL 113

Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSP 648
            +H   ++  +HRD+K  N+L+D+  + K++DFG A     ++    +K  VGT  Y++P
Sbjct: 114 AIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANK-MVNSKLPVGTPDYIAP 172

Query: 649 EYAQ------QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNS 686
           E         +G + ++ D +S GV+  E +  +  + F    S
Sbjct: 173 EVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGR--SPFHEGTS 214

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 50.0 bits (119), Expect = 2e-06
 Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 13/196 (6%)

Query: 483 LGEGGFGPVYKGRLLNGQEV-AVKRLSSQSGQGQEEFKNEIK----LIAKLQHRNLVRLL 537
           +G+G FG V   R    ++  AVK L  ++   ++E K+ +     L+  ++H  LV L 
Sbjct: 3   IGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLH 62

Query: 538 GCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLR 597
                 ++   + +Y+    L + L    +   L    R    E IA  L YLH    L 
Sbjct: 63  FSFQTADKLYFVLDYINGGELFYHL--QRERCFLEPRARFYAAE-IASALGYLHS---LN 116

Query: 598 VIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFS 657
           +++RDLK  NILLD   +  ++DFG+ +     E    T    GT  Y++PE   +  + 
Sbjct: 117 IVYRDLKPENILLDSQGHIVLTDFGLCK--ENIEHNGTTSTFCGTPEYLAPEVLHKQPYD 174

Query: 658 IKSDVFSFGVLLLETL 673
              D +  G +L E L
Sbjct: 175 RTVDWWCLGAVLYEML 190

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 50.1 bits (120), Expect = 2e-06
 Identities = 64/244 (26%), Positives = 99/244 (40%), Gaps = 58/244 (23%)

Query: 476 NFSTENKLGEGGFGPVYKGRL----LNGQEVAVKRL--SSQSGQGQ-EEFKNEIKLIAKL 528
           +F +   +G G FG V   RL      G   A+K+L  S    + Q    + E  ++A+ 
Sbjct: 2   DFESIKVIGRGAFGEV---RLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEA 58

Query: 529 QHRNLVRLLGCCIELEEKI-LIYEYMPNKSLDFFL--FDSTKENLLGWGTRVRIIEGIAQ 585
            +  +V+L     + E  + LI EY+P   +   L   D+  E      TR  I E I  
Sbjct: 59  DNPWVVKLY-YSFQDENYLYLIMEYLPGGDMMTLLMKKDTFTEE----ETRFYIAETI-- 111

Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGM------------ARIFGGDEL- 632
             L +    +L  IHRD+K  N+LLD   + K+SDFG+             RI       
Sbjct: 112 --LAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPS 169

Query: 633 ---------QSKTKRI--------------VGTYGYMSPEYAQQGLFSIKSDVFSFGVLL 669
                     S  ++               VGT  Y++PE   Q  ++ + D +S GV++
Sbjct: 170 NFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIM 229

Query: 670 LETL 673
            E L
Sbjct: 230 YEML 233

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 50.0 bits (119), Expect = 3e-06
 Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 8/151 (5%)

Query: 521 EIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRII 580
           E  ++  + H ++++L G     +   LI   +P    D + + + K N+      + I 
Sbjct: 133 EAHILRAINHPSIIQLKGTFTYNKFTCLI---LPRYKTDLYCYLAAKRNI-AICDILAIE 188

Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIV 640
             + + + YLH+    R+IHRD+KA NI ++   +  + DFG A  F  D   +K     
Sbjct: 189 RSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAA-CFPVDINANKYYGWA 244

Query: 641 GTYGYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
           GT    +PE   +  +    D++S G++L E
Sbjct: 245 GTIATNAPELLARDPYGPAVDIWSAGIVLFE 275

Length = 391

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 50.0 bits (119), Expect = 3e-06
 Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 5/93 (5%)

Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGDELQSKTKRIVG 641
           +A G+ +L   +    +HRDL A N+L+ +    KI DFG+AR I       SK    + 
Sbjct: 248 VANGMEFL---ASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFL- 303

Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
              +M+PE     L++  SDV+SFG+LL E  +
Sbjct: 304 PLKWMAPESIFNNLYTTLSDVWSFGILLWEIFT 336

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 48.1 bits (114), Expect = 1e-05
 Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 5/94 (5%)

Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           A+ +L L     +  IHRD+K  N+LLDK  + K++DFG       + +  +    VGT 
Sbjct: 149 AEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM-VRCDTAVGTP 207

Query: 644 GYMSPEYAQQ----GLFSIKSDVFSFGVLLLETL 673
            Y+SPE  +     G +  + D +S GV L E L
Sbjct: 208 DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 241

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 47.8 bits (113), Expect = 1e-05
 Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 8/97 (8%)

Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMA-RIFGGDELQSKTKRIVG 641
           +A+ ++ +    +L  +HRD+K  NIL+D + + +++DFG   ++     +QS     VG
Sbjct: 108 LAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVA--VG 165

Query: 642 TYGYMSPEYAQ-----QGLFSIKSDVFSFGVLLLETL 673
           T  Y+SPE  Q     +G +  + D +S GV + E L
Sbjct: 166 TPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEML 202

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 47.2 bits (112), Expect = 2e-05
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 3/90 (3%)

Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           IA+ +L L    +  +++RDLK  NILLD   +  + DFG+++    D     T    GT
Sbjct: 102 IAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDN--KTTNTFCGT 159

Query: 643 YGYMSPE-YAQQGLFSIKSDVFSFGVLLLE 671
             Y++PE    +  ++   D +S GVL+ E
Sbjct: 160 TEYLAPEVLLDEKGYTKHVDFWSLGVLVFE 189

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|133207 cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 46.1 bits (109), Expect = 4e-05
 Identities = 55/222 (24%), Positives = 95/222 (42%), Gaps = 44/222 (19%)

Query: 483 LGEGGFGPVYKGRLL-----------------------NGQE--VAVKRLSSQSGQGQEE 517
           LG+G    +Y GRL                        NG+E  V +K L          
Sbjct: 3   LGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALA 62

Query: 518 FKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRV 577
           F     L++++ H +L  + G C+   E I++ E++ +  LD  L        + W  ++
Sbjct: 63  FFETASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAW--KI 120

Query: 578 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDK-----DMNP--KISDFGMARIFGGD 630
            + + +A  L YL   +   ++H ++ A NILL +       +P  K+SD G++  F   
Sbjct: 121 TVAQQLASALSYLEDKN---LVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVS--FTAL 175

Query: 631 ELQSKTKRIVGTYGYMSPEYAQQGL-FSIKSDVFSFGVLLLE 671
             + + +RI     +++PE    G   S  +D +SFG  LLE
Sbjct: 176 SREERVERI----PWIAPECVPGGNSLSTAADKWSFGTTLLE 213

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 274

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 45.5 bits (108), Expect = 5e-05
 Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 16/100 (16%)

Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARI---------FGG----DELQ 633
           L YLH Y    ++HRDLK  N+L+    + K++DFG+++I         + G    D  +
Sbjct: 114 LEYLHNYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTRE 170

Query: 634 SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETL 673
              K++ GT  Y++PE   +  +    D ++ G++L E L
Sbjct: 171 FLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFL 210

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 44.9 bits (106), Expect = 2e-04
 Identities = 19/52 (36%), Positives = 34/52 (65%), Gaps = 3/52 (5%)

Query: 575 TRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARI 626
             V+ I  +A  L YLH++    +IHRDLK  N+L+  + + K++DFG++++
Sbjct: 105 MAVKYISEVALALDYLHRHG---IIHRDLKPDNMLISNEGHIKLTDFGLSKV 153

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 44.3 bits (104), Expect = 2e-04
 Identities = 58/238 (24%), Positives = 95/238 (39%), Gaps = 49/238 (20%)

Query: 476 NFSTENKLGEGGFGPVYKGRLLN----GQEVAVKRLSSQSGQGQEE---FKNEIKLIAKL 528
           +F +   +G G FG V   RL+     G   A+K L       +E+    + E  ++ + 
Sbjct: 2   DFESLKVIGRGAFGEV---RLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEA 58

Query: 529 QHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLL 588
               +V++     +     LI E++P   +   L    K+ L    T+  I    A+ +L
Sbjct: 59  DSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLM--KKDTLTEEETQFYI----AETVL 112

Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMA--------------------RIFG 628
            +    +L  IHRD+K  N+LLD   + K+SDFG+                       F 
Sbjct: 113 AIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFT 172

Query: 629 GDELQSKTK-------------RIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETL 673
              + SK K               VGT  Y++PE   Q  ++   D +S GV++ E L
Sbjct: 173 FQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEML 230

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 43.7 bits (104), Expect = 2e-04
 Identities = 45/156 (28%), Positives = 67/156 (42%), Gaps = 29/156 (18%)

Query: 530 HRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTK-ENLLGWGTRVRIIEGIAQGLL 588
           + N ++L      L+  +LI +Y+     D  LFD  K E  L      +II  + + L 
Sbjct: 68  NPNFIKLYYSVTTLKGHVLIMDYIK----DGDLFDLLKKEGKLSEAEVKKIIRQLVEALN 123

Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNP-KISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
            LH++    +IH D+K  N+L D+  +   + D+G+ +I G            GT  Y S
Sbjct: 124 DLHKH---NIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPSCYD------GTLDYFS 174

Query: 648 PEYAQQGLFSIKSDV--FSF-----GVLLLETLSSK 676
           PE        IK      SF     GVL  E L+ K
Sbjct: 175 PE-------KIKGHNYDVSFDWWAVGVLTYELLTGK 203

Length = 267

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 43.5 bits (102), Expect = 3e-04
 Identities = 58/238 (24%), Positives = 94/238 (39%), Gaps = 49/238 (20%)

Query: 476 NFSTENKLGEGGFGPVYKGRLLN----GQEVAVKRLSSQSGQGQEE---FKNEIKLIAKL 528
           +F +   +G G FG V   RL+     G   A+K L       +E+    + E  ++ + 
Sbjct: 2   DFESLKVIGRGAFGEV---RLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEA 58

Query: 529 QHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLL 588
               +V++     +     LI E++P   +   L    K+ L    T+  I E +    L
Sbjct: 59  DGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLM--KKDTLSEEATQFYIAETV----L 112

Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMA--------------------RIFG 628
            +    +L  IHRD+K  N+LLD   + K+SDFG+                       F 
Sbjct: 113 AIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFS 172

Query: 629 GDELQSKTK-------------RIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETL 673
              + SK K               VGT  Y++PE   Q  ++   D +S GV++ E L
Sbjct: 173 FQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEML 230

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|215638 PLN03225, PLN03225, Serine/threonine-protein kinase SNT7; Provisional

 Score = 43.6 bits (103), Expect = 4e-04
 Identities = 48/195 (24%), Positives = 79/195 (40%), Gaps = 36/195 (18%)

Query: 462 FPMFSLASV------SAATANFSTENKLGEGGFGPVYKGRLLN-----GQEVAVKRLSSQ 510
             MF LA +      S    +F    KLGEG FG VYK  L+N       +  +K+ +++
Sbjct: 113 VDMFVLAPLEGLFRPSFKKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKK-ATE 171

Query: 511 SGQGQEEFKNE------IKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSL------ 558
            G   E + NE          A   +  L  +     + +E  L++ Y    +L      
Sbjct: 172 YGAV-EIWMNERVRRACPNSCADFVYGFLEPVSS--KKEDEYWLVWRYEGESTLADLMQS 228

Query: 559 -DF------FLFDSTKENLLGWGTRVRIIEGIAQGLLY-LHQYSRLRVIHRDLKASNILL 610
            +F      +L    ++   G     +II+ I + +L+ L       ++HRD+K  NI+ 
Sbjct: 229 KEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIF 288

Query: 611 DKDMNP-KISDFGMA 624
            +     KI D G A
Sbjct: 289 SEGSGSFKIIDLGAA 303

Length = 566

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 42.5 bits (100), Expect = 7e-04
 Identities = 32/132 (24%), Positives = 53/132 (40%), Gaps = 41/132 (31%)

Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF--------------- 627
           IA+    +    ++  IHRD+K  NIL+D+D + K++DFG+   F               
Sbjct: 107 IAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHH 166

Query: 628 --------------GGDELQSKTKR------------IVGTYGYMSPEYAQQGLFSIKSD 661
                             L+   +R            +VGT  Y++PE   +  ++   D
Sbjct: 167 RQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCD 226

Query: 662 VFSFGVLLLETL 673
            +S GV+L E L
Sbjct: 227 WWSVGVILYEML 238

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 42.3 bits (99), Expect = 8e-04
 Identities = 35/136 (25%), Positives = 56/136 (41%), Gaps = 45/136 (33%)

Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG-------------- 628
           IA+  L +    ++  IHRD+K  NIL+D D + K++DFG+   F               
Sbjct: 107 IAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHI 166

Query: 629 -------------------GDELQSKTKR------------IVGTYGYMSPEYAQQGLFS 657
                              GD L++  +R            +VGT  Y++PE   +  ++
Sbjct: 167 RQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYT 226

Query: 658 IKSDVFSFGVLLLETL 673
              D +S GV+L E L
Sbjct: 227 QLCDWWSVGVILFEML 242

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 42.3 bits (99), Expect = 8e-04
 Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 25/206 (12%)

Query: 481 NKLGEGGFGPVYKGRLLNGQE-VAVKRLSSQSGQGQEEFKN-EIKLIAKLQHRNLVRLLG 538
           N +G G FG VY+   ++  E VA+K++         ++KN E+ ++  L H N++ L  
Sbjct: 72  NIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-----QYKNRELLIMKNLNHINIIFLKD 126

Query: 539 C----CIELEEKIL----IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYL 590
                C +  EK +    + E++P     +    +   + L           + + L Y+
Sbjct: 127 YYYTECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYI 186

Query: 591 HQYSRLRVIHRDLKASNILLDKDMNP-KISDFGMAR-IFGGDELQSKTKRIVGTYGYMSP 648
           H  S+  + HRDLK  N+L+D + +  K+ DFG A+ +  G   Q     I   + Y +P
Sbjct: 187 H--SKF-ICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAG---QRSVSYICSRF-YRAP 239

Query: 649 EYAQQGL-FSIKSDVFSFGVLLLETL 673
           E       ++   D++S G ++ E +
Sbjct: 240 ELMLGATNYTTHIDLWSLGCIIAEMI 265

Length = 440

>gnl|CDD|173643 cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 41.5 bits (97), Expect = 9e-04
 Identities = 53/215 (24%), Positives = 91/215 (42%), Gaps = 42/215 (19%)

Query: 483 LGEGGFGPVYKGRLL-----------NGQEVAV--KRLSSQSGQGQEEFKNEIKLIAKLQ 529
           LG G    +Y G L              +E+ V  K L          F     ++ ++ 
Sbjct: 3   LGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVS 62

Query: 530 HRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLY 589
           H+++V L G C+   E I++ E++    LD F+    K ++L    + ++ + +A  L Y
Sbjct: 63  HKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFM--HRKSDVLTTPWKFKVAKQLASALSY 120

Query: 590 LHQYSRLRVIHRDLKASNILL-----DKDMNP--KISDFG-----MARIFGGDELQSKTK 637
           L       ++H ++   NILL     D +  P  K+SD G     ++R       Q   +
Sbjct: 121 LEDK---DLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSR-------QECVE 170

Query: 638 RIVGTYGYMSPEYAQQG-LFSIKSDVFSFGVLLLE 671
           RI     +++PE  +     SI +D +SFG  L E
Sbjct: 171 RI----PWIAPECVEDSKNLSIAADKWSFGTTLWE 201

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 262

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 41.0 bits (96), Expect = 0.002
 Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 8/78 (10%)

Query: 483 LGEGGFGPVYK------GRLLNGQEVAVKRL-SSQSGQGQEEFKNEIKLIAKL-QHRNLV 534
           LG G FG V +      G+  N   VAVK L +S     +E   +E+K+++ L QH+N+V
Sbjct: 46  LGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIV 105

Query: 535 RLLGCCIELEEKILIYEY 552
            LLG C      ++I EY
Sbjct: 106 NLLGACTHGGPVLVITEY 123

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|173766 cd08226, PK_STRAD_beta, Pseudokinase domain of STE20-related kinase adapter protein beta

 Score = 41.1 bits (96), Expect = 0.002
 Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 26/108 (24%)

Query: 579 IIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTK- 637
           I+ G  +GL YLHQ      IHR++KAS+IL        IS  G+  + G   L S  + 
Sbjct: 106 ILFGALRGLNYLHQNG---YIHRNIKASHIL--------ISGDGLVSLSGLSHLYSLVRN 154

Query: 638 ----RIVGTY--------GYMSPEYAQQGL--FSIKSDVFSFGVLLLE 671
               ++V  +         ++SPE  +Q L  +++KSD++S G+   E
Sbjct: 155 GQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACE 202

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. STRAD-beta is also referred to as ALS2CR2 (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 2 protein), since the human gene encoding it is located within the juvenile ALS2 critical region on chromosome 2q33-q34. It is not linked to the development of ALS2. Length = 328

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 40.8 bits (95), Expect = 0.002
 Identities = 34/136 (25%), Positives = 55/136 (40%), Gaps = 45/136 (33%)

Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG-------------- 628
           IA+    +    ++  IHRD+K  NIL+D+D + K++DFG+   F               
Sbjct: 107 IAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHV 166

Query: 629 -------------------GDELQSKTKR------------IVGTYGYMSPEYAQQGLFS 657
                              GD L+   +R            +VGT  Y++PE   +  ++
Sbjct: 167 RQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYT 226

Query: 658 IKSDVFSFGVLLLETL 673
              D +S GV+L E L
Sbjct: 227 QLCDWWSVGVILYEML 242

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 40.0 bits (94), Expect = 0.004
 Identities = 60/249 (24%), Positives = 92/249 (36%), Gaps = 60/249 (24%)

Query: 482 KLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKN---EIKLIAKLQHRNLVRLL 537
            LG+G  G V+  RL   G+  A+K L  +    + + K    E +++A L H  L  L 
Sbjct: 8   LLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLY 67

Query: 538 GCCIELEEKI-LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQ--------GLL 588
               + E  + L+ +Y P   L F L                + E +A+         L 
Sbjct: 68  -ASFQTETYLCLVMDYCPGGEL-FRLLQRQPGK--------CLSEEVARFYAAEVLLALE 117

Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDF---------GMARIFGGDELQSKTKRI 639
           YLH    L +++RDLK  NILL +  +  +SDF                  +   ++   
Sbjct: 118 YLHL---LGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVN 174

Query: 640 ------------------VGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETL-------S 674
                             VGT  Y++PE           D ++ G+LL E L        
Sbjct: 175 SIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKG 234

Query: 675 SKRNTDFSN 683
           S R+  FSN
Sbjct: 235 SNRDETFSN 243

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173767 cd08227, PK_STRAD_alpha, Pseudokinase domain of STE20-related kinase adapter protein alpha

 Score = 39.9 bits (93), Expect = 0.004
 Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 14/102 (13%)

Query: 579 IIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKD----MNPKISDFGMARIFGGDELQ- 633
           I++G+ + L Y+H    +  +HR +KAS+IL+  D    ++   S+  M  I  G  L+ 
Sbjct: 106 ILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSM--INHGQRLRV 160

Query: 634 --SKTKRIVGTYGYMSPEYAQQGL--FSIKSDVFSFGVLLLE 671
                K  V    ++SPE  QQ L  +  KSD++S G+   E
Sbjct: 161 VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACE 202

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha, stabilized through ATP and MO25, may be needed to activate LKB1. A mutation which results in a truncation of a C-terminal part of the human STRAD-alpha pseudokinase domain and disrupts its association with LKB1, leads to PMSE (polyhydramnios, megalencephaly, symptomatic epilepsy) syndrome. Several splice variants of STRAD-alpha exist which exhibit different effects on the localization and activation of LKB1. Length = 327

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	795
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
KOG0610	459	consensus Putative serine/threonine protein kinase	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
KOG4717	864	consensus Serine/threonine protein kinase [Signal	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	100.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	100.0
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	100.0
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	100.0
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	100.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	100.0
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
KOG0690	516	consensus Serine/threonine protein kinase [Signal	100.0
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	100.0
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	100.0
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	100.0
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	100.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
KOG0577	948	consensus Serine/threonine protein kinase [Signal	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
PTZ00284	467	protein kinase; Provisional	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	100.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	100.0
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
KOG0596	677	consensus Dual specificity; serine/threonine and t	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	100.0
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	100.0
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	100.0
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	100.0
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	100.0
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	100.0
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	100.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	100.0
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	100.0
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	100.0
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	100.0
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	100.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	100.0
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	100.0
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	100.0
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	100.0
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	100.0
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	100.0
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	100.0
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	100.0
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	100.0
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	100.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	100.0
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	100.0
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	100.0
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	100.0
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	100.0
KOG0607	463	consensus MAP kinase-interacting kinase and relate	100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	100.0
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	100.0
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	100.0
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	100.0
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	100.0
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	100.0
KOG0586	596	consensus Serine/threonine protein kinase [General	100.0
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	100.0
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	100.0
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	100.0
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	100.0
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	100.0
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	100.0
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	100.0
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	100.0
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	100.0
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	100.0
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	100.0
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	100.0
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	100.0
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	100.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	100.0
PHA03210	501	serine/threonine kinase US3; Provisional	100.0
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	100.0
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	100.0
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	100.0
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	100.0
KOG0584	632	consensus Serine/threonine protein kinase [General	100.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	100.0
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	100.0
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	100.0
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	100.0
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	100.0
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	100.0
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	100.0
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	100.0
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	100.0
PLN00009	294	cyclin-dependent kinase A; Provisional	100.0
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	100.0
PHA02882	294	putative serine/threonine kinase; Provisional	100.0
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	100.0
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	100.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	100.0
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	100.0
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	100.0
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	100.0
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	100.0
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	100.0
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	100.0
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	100.0
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	100.0
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	100.0
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	100.0
KOG0696	683	consensus Serine/threonine protein kinase [Signal	100.0
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	100.0
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	100.0
PTZ00024	335	cyclin-dependent protein kinase; Provisional	100.0
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	100.0
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	100.0
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	100.0
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	100.0
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	100.0
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	100.0
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	100.0
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	100.0
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	100.0
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	100.0
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	100.0
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	100.0
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	100.0
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.98
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.98
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.98
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.98
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.98
KOG3653	534	consensus Transforming growth factor beta/activin	99.98
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.98
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.98
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.97
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.97
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.97
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.97
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.97
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.97
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.97
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.97
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.97
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.97
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.97
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.97
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.97
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.97
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.97
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.96
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.96
PF01453	114	B_lectin: D-mannose binding lectin; InterPro: IPR0	99.96
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.96
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.96
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.96
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.95
KOG1152	772	consensus Signal transduction serine/threonine kin	99.95
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.95
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.95
PF00954	110	S_locus_glycop: S-locus glycoprotein family; Inter	99.94
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.94
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.94
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.94
cd00028	116	B_lectin Bulb-type mannose-specific lectin. The do	99.94
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.94
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.93
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.92
smart00108	114	B_lectin Bulb-type mannose-specific lectin.	99.92
PLN00181	793	protein SPA1-RELATED; Provisional	99.91
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.9
PRK09188	365	serine/threonine protein kinase; Provisional	99.89
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.87
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.87
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.86
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.84
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.84
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.84
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.83
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.82
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.81
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.81
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.8
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.79
PRK12274	218	serine/threonine protein kinase; Provisional	99.78
PRK10345	210	hypothetical protein; Provisional	99.75
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.75
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.74
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.72
smart00090	237	RIO RIO-like kinase.	99.71
PF08276	66	PAN_2: PAN-like domain; InterPro: IPR013227 PAN do	99.7
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.7
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.69
PRK14879	211	serine/threonine protein kinase; Provisional	99.69
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.68
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.67
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.65
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.6
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.59
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.58
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.54
cd00129	80	PAN_APPLE PAN/APPLE-like domain; present in N-term	99.46
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.38
KOG1266	458	consensus Protein kinase [Signal transduction mech	99.38
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.3
cd01098	84	PAN_AP_plant Plant PAN/APPLE-like domain; present	99.3
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.29
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.26
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.12
KOG1243	690	consensus Protein kinase [General function predict	99.11
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.09
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.08
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.01
KOG3087	229	consensus Serine/threonine protein kinase [General	98.96
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.94
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	98.9
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.83
COG4248	637	Uncharacterized protein with protein kinase and he	98.8
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.76
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.68
KOG2137	700	consensus Protein kinase [Signal transduction mech	98.53
PF01453	114	B_lectin: D-mannose binding lectin; InterPro: IPR0	98.45
PRK09902	216	hypothetical protein; Provisional	98.45
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.45
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.38
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.35
smart00473	78	PAN_AP divergent subfamily of APPLE domains. Apple	98.33
smart00108	114	B_lectin Bulb-type mannose-specific lectin.	98.31
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.31
KOG0576	829	consensus Mitogen-activated protein kinase kinase	98.21
cd00028	116	B_lectin Bulb-type mannose-specific lectin. The do	98.17
PF01636	239	APH: Phosphotransferase enzyme family This family	98.13
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	98.04
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	98.0
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	98.0
KOG1235	538	consensus Predicted unusual protein kinase [Genera	97.91
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	97.88
PLN02876	822	acyl-CoA dehydrogenase	97.87
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	97.85
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	97.83
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	97.75
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	97.75
PRK10593	297	hypothetical protein; Provisional	97.65
PRK09550	401	mtnK methylthioribose kinase; Reviewed	97.63
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	97.61
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	97.49
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	97.39
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	97.31
KOG2268	465	consensus Serine/threonine protein kinase [Signal	97.18
PF11883	48	DUF3403: Domain of unknown function (DUF3403); Int	97.12
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	97.1
PLN02236	344	choline kinase	97.03
PRK05231	319	homoserine kinase; Provisional	97.0
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	96.95
KOG2270	520	consensus Serine/threonine protein kinase involved	96.87
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	96.76
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	96.66
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	96.63
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	96.47
cd01100	73	APPLE_Factor_XI_like Subfamily of PAN/APPLE-like d	96.37
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	96.34
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	96.24

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.9e-50  Score=435.77  Aligned_cols=286  Identities=45%  Similarity=0.759  Sum_probs=252.5

Q ss_pred             CCCcccHHhHHHHccCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeee
Q 003786          461 WFPMFSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCC  540 (795)
Q Consensus       461 ~~~~~~~~~i~~~~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~  540 (795)
                      ....|++.++..+|++|...+.||+|+||.||+|...+++.||||++.....+...+|.+|+++|.+++|||+|+|+|||
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC  140 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC  140 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence            45679999999999999999999999999999999999999999988765433155699999999999999999999999


Q ss_pred             eecc-eeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeee
Q 003786          541 IELE-EKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKIS  619 (795)
Q Consensus       541 ~~~~-~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~  619 (795)
                      .+.+ +.+||||||++|+|+++|+..... .++|..+++|+.++|+||+|||+....+||||||||+|||||+++.+||+
T Consensus       141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKls  219 (361)
T KOG1187|consen  141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLS  219 (361)
T ss_pred             ecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEcc
Confidence            9999 599999999999999999875544 78999999999999999999999988889999999999999999999999


Q ss_pred             ccccccccCCCccccccccc-ccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCC-CcchhHhHhHhhhc
Q 003786          620 DFGMARIFGGDELQSKTKRI-VGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSN-TNSLTLLGHAWDLW  697 (795)
Q Consensus       620 DFGla~~~~~~~~~~~~~~~-~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~-~~~~~~~~~~~~~~  697 (795)
                      |||+|+.....  ....... .||.+|+|||++..+..+.|+|||||||+|+||++|+++.+... .....+..+++..+
T Consensus       220 DFGLa~~~~~~--~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~  297 (361)
T KOG1187|consen  220 DFGLAKLGPEG--DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLL  297 (361)
T ss_pred             CccCcccCCcc--ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHH
Confidence            99999765431  1111222 79999999999999999999999999999999999999988654 44445788888888


Q ss_pred             cCcccccccCcccc-chhhH-HHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          698 KDDRAWELIDPTLQ-NEASY-LILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       698 ~~~~~~~~id~~l~-~~~~~-~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      ...+..+++|+.+. ..... .+..++..++.+|++.+|++||+|.||+++|+.
T Consensus       298 ~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~  351 (361)
T KOG1187|consen  298 EEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEG  351 (361)
T ss_pred             HCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHh
Confidence            99999999999987 44443 678889999999999999999999999999955

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-46  Score=383.11  Aligned_cols=253  Identities=26%  Similarity=0.371  Sum_probs=209.4

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecce-eeEEee
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEE-KILIYE  551 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~lv~E  551 (795)
                      .+.+..+.||+|..|+||+++++ +++.+|+|++.... ....+++.+|++++++.+||+||++|+.|..... ..++||
T Consensus        79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mE  158 (364)
T KOG0581|consen   79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICME  158 (364)
T ss_pred             HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehh
Confidence            45677889999999999999976 58889999995443 3445789999999999999999999999999994 999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      ||++|||+.++...   +.+++....+++.+|++||.|||+.  ++||||||||+||||+..|.|||||||.+..+-+. 
T Consensus       159 YMDgGSLd~~~k~~---g~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS-  232 (364)
T KOG0581|consen  159 YMDGGSLDDILKRV---GRIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS-  232 (364)
T ss_pred             hcCCCCHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEeccccccHHhhhh-
Confidence            99999999998433   5589999999999999999999963  24999999999999999999999999999876533 


Q ss_pred             ccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcccc
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQ  711 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~  711 (795)
                         ...+++||..|||||.+.+..|+.++||||||++++|+++|+.|+...................++.          
T Consensus       233 ---~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~pp----------  299 (364)
T KOG0581|consen  233 ---IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPP----------  299 (364)
T ss_pred             ---hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCC----------
Confidence               4466899999999999999999999999999999999999999997653222222211111111111          


Q ss_pred             chhhH-HHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          712 NEASY-LILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       712 ~~~~~-~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ...+. .+..++.+++..||+.||.+||++.|+++|
T Consensus       300 P~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H  335 (364)
T KOG0581|consen  300 PRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH  335 (364)
T ss_pred             CCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            11222 366788999999999999999999999986

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=9.1e-46  Score=399.44  Aligned_cols=248  Identities=26%  Similarity=0.393  Sum_probs=214.3

Q ss_pred             cCCccccccCcCCcccEEEeEe-cCcceEEEEEeccc---CccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          475 ANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQ---SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      .+|...+.||+|||+.||.++. ..|+.||+|++.+.   .....+.+.+|++|.+.|+|||||+++++|++.++.|+|.
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            5699999999999999999997 67999999999764   3445678999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      |+|+.++|..++   .+++.+++.++..++.||+.||.|||+++   |||||||..|++|+++.+|||+|||||..+..+
T Consensus        98 ELC~~~sL~el~---Krrk~ltEpEary~l~QIv~GlkYLH~~~---IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~  171 (592)
T KOG0575|consen   98 ELCHRGSLMELL---KRRKPLTEPEARYFLRQIVEGLKYLHSLG---IIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD  171 (592)
T ss_pred             EecCCccHHHHH---HhcCCCCcHHHHHHHHHHHHHHHHHHhcC---ceecccchhheeecCcCcEEecccceeeeecCc
Confidence            999999999988   36678999999999999999999999998   999999999999999999999999999987654


Q ss_pred             cccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccc
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL  710 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l  710 (795)
                      .  ....+.+|||.|.|||++....++..+||||+|||||.||.|++||+.....+...      ..+.   .+.     
T Consensus       172 ~--Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~------~Ik~---~~Y-----  235 (592)
T KOG0575|consen  172 G--ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYN------KIKL---NEY-----  235 (592)
T ss_pred             c--cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHH------HHHh---cCc-----
Confidence            3  34566899999999999999999999999999999999999999998654222211      0000   011     


Q ss_pred             cchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       711 ~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                        ..+.....+..+||.++|+.||.+|||+++|+.+
T Consensus       236 --~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h  269 (592)
T KOG0575|consen  236 --SMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH  269 (592)
T ss_pred             --ccccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence              1222445677899999999999999999999986

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=5.7e-46  Score=381.94  Aligned_cols=253  Identities=26%  Similarity=0.355  Sum_probs=207.5

Q ss_pred             ccCCccccccCcCCcccEEEeEe-cCcceEEEEEecccCcc-------chHHHHHHHHHHHhcCCcccceeeeeeeecce
Q 003786          474 TANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQ-------GQEEFKNEIKLIAKLQHRNLVRLLGCCIELEE  545 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  545 (795)
                      .+.|.+.+.||+|+||.|-+|.. .+|+.||||+++++...       .....++|+++|++|+|||||+++++|...+.
T Consensus       171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds  250 (475)
T KOG0615|consen  171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS  250 (475)
T ss_pred             cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence            35688999999999999999975 46999999999775221       12335799999999999999999999999999


Q ss_pred             eeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCC---CCeeeeccc
Q 003786          546 KILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKD---MNPKISDFG  622 (795)
Q Consensus       546 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~---~~vkL~DFG  622 (795)
                      .|+||||+.||.|.+.+.   ..+.+.+..-..++.|++.|+.|||++|   |+||||||+|||+..+   ..+||+|||
T Consensus       251 ~YmVlE~v~GGeLfd~vv---~nk~l~ed~~K~~f~Qll~avkYLH~~G---I~HRDiKPeNILl~~~~e~~llKItDFG  324 (475)
T KOG0615|consen  251 SYMVLEYVEGGELFDKVV---ANKYLREDLGKLLFKQLLTAVKYLHSQG---IIHRDIKPENILLSNDAEDCLLKITDFG  324 (475)
T ss_pred             eEEEEEEecCccHHHHHH---hccccccchhHHHHHHHHHHHHHHHHcC---cccccCCcceEEeccCCcceEEEecccc
Confidence            999999999999998884   4556888888999999999999999999   9999999999999765   779999999


Q ss_pred             cccccCCCcccccccccccccccccccccccCC---CCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccC
Q 003786          623 MARIFGGDELQSKTKRIVGTYGYMSPEYAQQGL---FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKD  699 (795)
Q Consensus       623 la~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~---~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~  699 (795)
                      +|+..+..   ...++++|||.|.|||++.++.   +..|+|+||+||+||-+++|.+||........ +    ..+...
T Consensus       325 lAK~~g~~---sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~s-l----~eQI~~  396 (475)
T KOG0615|consen  325 LAKVSGEG---SFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPS-L----KEQILK  396 (475)
T ss_pred             hhhccccc---eehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCcc-H----HHHHhc
Confidence            99987633   3567799999999999997653   44588999999999999999999975443221 0    111122


Q ss_pred             cccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          700 DRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       700 ~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ++..      +.........++..++|.+||..||++|||+.|++++
T Consensus       397 G~y~------f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h  437 (475)
T KOG0615|consen  397 GRYA------FGPLQWDRISEEALDLINWMLVVDPENRPSADEALNH  437 (475)
T ss_pred             Cccc------ccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence            2211      1223445567788999999999999999999999985

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=3.7e-45  Score=376.94  Aligned_cols=205  Identities=32%  Similarity=0.529  Sum_probs=183.6

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEeccc--CccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQ--SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      ..+|.+.++||+|+||+||+|+++ ++.+||||.+.+.  .....+.+..|+.+|+.++|||||++++++..++..+|||
T Consensus         9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM   88 (429)
T KOG0595|consen    9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM   88 (429)
T ss_pred             cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence            478999999999999999999975 4899999999766  4556677889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCC------CCeeeeccccc
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKD------MNPKISDFGMA  624 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~------~~vkL~DFGla  624 (795)
                      |||.||+|.++++.   .+.+++..+..++.|||.||++||+++   ||||||||+||||+..      -.+||+|||+|
T Consensus        89 EyC~gGDLs~yi~~---~~~l~e~t~r~Fm~QLA~alq~L~~~~---IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfA  162 (429)
T KOG0595|consen   89 EYCNGGDLSDYIRR---RGRLPEATARHFMQQLASALQFLHENN---IIHRDLKPQNILLSTTARNDTSPVLKIADFGFA  162 (429)
T ss_pred             EeCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCcceEEeccCCCCCCCceEEecccchh
Confidence            99999999999944   446999999999999999999999998   9999999999999764      56899999999


Q ss_pred             cccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcch
Q 003786          625 RIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSL  687 (795)
Q Consensus       625 ~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~  687 (795)
                      +.+....   ...+.+|++-|||||+++...|+.|+|+||+|+|||+|++|+.||+.....+.
T Consensus       163 R~L~~~~---~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL  222 (429)
T KOG0595|consen  163 RFLQPGS---MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKEL  222 (429)
T ss_pred             hhCCchh---HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHH
Confidence            9887544   34568999999999999999999999999999999999999999986554433

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-45  Score=378.19  Aligned_cols=251  Identities=25%  Similarity=0.333  Sum_probs=209.6

Q ss_pred             HccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeE
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKIL  548 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  548 (795)
                      ..++|++.+.||+|+||+||+++.+ +++.+|+|++++..   ....+..++|..+|.+++||+||+++..|++.+++||
T Consensus        23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl  102 (357)
T KOG0598|consen   23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL  102 (357)
T ss_pred             ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence            4578999999999999999999865 48899999997753   2345678899999999999999999999999999999


Q ss_pred             EeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccC
Q 003786          549 IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      |+||+.||.|..+|   .+++.+++..+..++.+|+.||.|||+++   ||||||||+|||||.+|+++|+||||++..-
T Consensus       103 Vld~~~GGeLf~hL---~~eg~F~E~~arfYlaEi~lAL~~LH~~g---IiyRDlKPENILLd~~GHi~LtDFgL~k~~~  176 (357)
T KOG0598|consen  103 VLDYLNGGELFYHL---QREGRFSEDRARFYLAEIVLALGYLHSKG---IIYRDLKPENILLDEQGHIKLTDFGLCKEDL  176 (357)
T ss_pred             EEeccCCccHHHHH---HhcCCcchhHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHeeecCCCcEEEeccccchhcc
Confidence            99999999999999   45566999999999999999999999999   9999999999999999999999999999543


Q ss_pred             CCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCc
Q 003786          629 GDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP  708 (795)
Q Consensus       629 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~  708 (795)
                      ..  ...+.+++||+.|||||++.+..|+..+|+||||+++|||++|.+||...+.....      .....++       
T Consensus       177 ~~--~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~------~~I~~~k-------  241 (357)
T KOG0598|consen  177 KD--GDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMY------DKILKGK-------  241 (357)
T ss_pred             cC--CCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHH------HHHhcCc-------
Confidence            22  23456689999999999999999999999999999999999999999876533221      1111111       


Q ss_pred             cccchhhHHHHHHHHHHHHhhccCCCCCCC----CHHHHHHH
Q 003786          709 TLQNEASYLILNRYINVGLLCVQEDAADRP----TMFEVVSM  746 (795)
Q Consensus       709 ~l~~~~~~~~~~~l~~li~~cL~~dP~~RP----t~~evl~~  746 (795)
                        ....+.....+..+++.++|+.+|++|.    .+.+|-+|
T Consensus       242 --~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~H  281 (357)
T KOG0598|consen  242 --LPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRH  281 (357)
T ss_pred             --CCCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcC
Confidence              0112222445778899999999999995    56666554

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=9.5e-44  Score=382.90  Aligned_cols=258  Identities=32%  Similarity=0.497  Sum_probs=210.7

Q ss_pred             CCccccccCcCCcccEEEeEecCcceEEEEEecccCccc--hHHHHHHHHHHHhcCCcccceeeeeeeecc-eeeEEeec
Q 003786          476 NFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQG--QEEFKNEIKLIAKLQHRNLVRLLGCCIELE-EKILIYEY  552 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~E~  552 (795)
                      +..+.+.||+|+||+||+|.+.....||||++.......  .+.|.+|+.+|.+++|||||+++|+|.+.. ...+||||
T Consensus        42 ~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy  121 (362)
T KOG0192|consen   42 ELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEY  121 (362)
T ss_pred             HhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEe
Confidence            345556799999999999998554449999997643222  568999999999999999999999999988 79999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCC-CeeeeccccccccCCCc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDM-NPKISDFGMARIFGGDE  631 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~-~vkL~DFGla~~~~~~~  631 (795)
                      |++|+|..+++.. ....+++..+..++.+||+||.|||+++.  ||||||||+||||+.++ ++||+|||+++......
T Consensus       122 ~~~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~~~~--iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~  198 (362)
T KOG0192|consen  122 MPGGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHSEGP--IIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK  198 (362)
T ss_pred             CCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcCCC--eeecccChhhEEEcCCCCEEEECCCccceeecccc
Confidence            9999999999764 45679999999999999999999999863  99999999999999998 99999999998754322


Q ss_pred             ccccccccccccccccccccc--cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcc
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQ--QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT  709 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~--~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~  709 (795)
                        ...+...||+.|||||++.  ...|+.|+|||||||+||||+||+.||.......  ..   ......         .
T Consensus       199 --~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~--~~---~~v~~~---------~  262 (362)
T KOG0192|consen  199 --TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQ--VA---SAVVVG---------G  262 (362)
T ss_pred             --ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHH--HH---HHHHhc---------C
Confidence              1223368999999999999  6699999999999999999999999997654411  11   111111         1


Q ss_pred             ccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccccC
Q 003786          710 LQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTI  752 (795)
Q Consensus       710 l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~~  752 (795)
                      .+...+......+..++.+||+.||+.||++.+++..|+....
T Consensus       263 ~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~  305 (362)
T KOG0192|consen  263 LRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMS  305 (362)
T ss_pred             CCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHH
Confidence            1222233356788899999999999999999999999976433

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=2.9e-43  Score=373.44  Aligned_cols=255  Identities=27%  Similarity=0.332  Sum_probs=213.9

Q ss_pred             HccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhc-CCcccceeeeeeeecceee
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEEKI  547 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~  547 (795)
                      ...+|.+++.||+|+|++|++|+.. ++++||||++.+..   ......+..|-.+|.+| .||.|++||..|+++..+|
T Consensus        71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLY  150 (604)
T KOG0592|consen   71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLY  150 (604)
T ss_pred             ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceE
Confidence            3478999999999999999999854 59999999997753   23345677899999999 8999999999999999999


Q ss_pred             EEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccccc
Q 003786          548 LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF  627 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~  627 (795)
                      +|+||+++|+|.++|   .+.+.+++..+..++.+|+.||+|||+.|   ||||||||+|||||+|+++||+|||-|+.+
T Consensus       151 FvLe~A~nGdll~~i---~K~Gsfde~caR~YAAeIldAleylH~~G---IIHRDlKPENILLd~dmhikITDFGsAK~l  224 (604)
T KOG0592|consen  151 FVLEYAPNGDLLDLI---KKYGSFDETCARFYAAEILDALEYLHSNG---IIHRDLKPENILLDKDGHIKITDFGSAKIL  224 (604)
T ss_pred             EEEEecCCCcHHHHH---HHhCcchHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeEcCCCcEEEeeccccccC
Confidence            999999999999999   44577999999999999999999999998   999999999999999999999999999987


Q ss_pred             CCCccc---------cc--ccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhh
Q 003786          628 GGDELQ---------SK--TKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDL  696 (795)
Q Consensus       628 ~~~~~~---------~~--~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~  696 (795)
                      ......         ..  ...++||..|.+||++..+..+..+|+|+||||||+|+.|.+||-..++...  .+.... 
T Consensus       225 ~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyli--FqkI~~-  301 (604)
T KOG0592|consen  225 SPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLI--FQKIQA-  301 (604)
T ss_pred             ChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHH--HHHHHH-
Confidence            543221         11  2458999999999999999999999999999999999999999976543322  111100 


Q ss_pred             ccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          697 WKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       697 ~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                                   +.-..+...++...+||.+.|..||.+|+|..+|.+|.=.
T Consensus       302 -------------l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF  341 (604)
T KOG0592|consen  302 -------------LDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFF  341 (604)
T ss_pred             -------------hcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhCccc
Confidence                         1112333344677889999999999999999999998544

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=5.1e-44  Score=350.13  Aligned_cols=257  Identities=27%  Similarity=0.398  Sum_probs=208.9

Q ss_pred             ccCCccccccCcCCcccEEEeE-ecCcceEEEEEeccc--CccchHHHHHHHHHHHhcCCcccceeee-eeeecce-eeE
Q 003786          474 TANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQ--SGQGQEEFKNEIKLIAKLQHRNLVRLLG-CCIELEE-KIL  548 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~-~~~~~~~-~~l  548 (795)
                      ..+|++.++||+|.||.||+++ ..+|..+|.|.+.-.  +....+....|+.+|++|+|||||++++ .|.++.. +++
T Consensus        18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlni   97 (375)
T KOG0591|consen   18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNI   97 (375)
T ss_pred             HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHH
Confidence            4679999999999999999997 457999999988633  2334566789999999999999999998 5666655 889


Q ss_pred             EeecCCCCChhhhhhcc-CCcccCChhhHHHHHHHHHHHHHHHHhcC-CCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          549 IYEYMPNKSLDFFLFDS-TKENLLGWGTRVRIIEGIAQGLLYLHQYS-RLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                      |||+|.+|+|..++..- ...+.+++..+++++.|++.||..+|++- +..|+||||||.||+|+.+|.|||+||||++.
T Consensus        98 vmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~  177 (375)
T KOG0591|consen   98 VMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRF  177 (375)
T ss_pred             HHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhH
Confidence            99999999999998543 34567999999999999999999999943 22499999999999999999999999999999


Q ss_pred             cCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCccccccc
Q 003786          627 FGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELI  706 (795)
Q Consensus       627 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i  706 (795)
                      +....  ......+|||.||+||.+....|+.|+||||+||++|||..-++||.+.+  -..+...    ...+.     
T Consensus       178 l~s~~--tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n--~~~L~~K----I~qgd-----  244 (375)
T KOG0591|consen  178 LSSKT--TFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDN--LLSLCKK----IEQGD-----  244 (375)
T ss_pred             hcchh--HHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCccccc--HHHHHHH----HHcCC-----
Confidence            87554  34456899999999999999999999999999999999999999997652  1111111    11111     


Q ss_pred             Cccccchhh-HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          707 DPTLQNEAS-YLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       707 d~~l~~~~~-~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                          ....+ ...+..+..||..|+..||+.||+...+++.+
T Consensus       245 ----~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di  282 (375)
T KOG0591|consen  245 ----YPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDI  282 (375)
T ss_pred             ----CCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHH
Confidence                11233 45677888999999999999999865555544

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=5.4e-43  Score=346.25  Aligned_cols=264  Identities=22%  Similarity=0.303  Sum_probs=209.5

Q ss_pred             cCCccccccCcCCcccEEEeEecC-cceEEEEEecccCc-c-chHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSG-Q-GQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~-~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      ++|+...++|+|+||+||++++++ |+.||||++..... . -.+-..+|+++|++|+|+|+|.++++|......+||+|
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE   81 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE   81 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence            468888999999999999999764 99999999865432 2 23456799999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      ||+..-|+++-.   ...-++.+.+.+++.|+++|+.|+|+++   +|||||||+||||+.+|.+||||||+|+.+....
T Consensus        82 ~~dhTvL~eLe~---~p~G~~~~~vk~~l~Q~l~ai~~cHk~n---~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pg  155 (396)
T KOG0593|consen   82 YCDHTVLHELER---YPNGVPSELVKKYLYQLLKAIHFCHKNN---CIHRDIKPENILITQNGVVKLCDFGFARTLSAPG  155 (396)
T ss_pred             ecchHHHHHHHh---ccCCCCHHHHHHHHHHHHHHhhhhhhcC---eecccCChhheEEecCCcEEeccchhhHhhcCCc
Confidence            999887776542   2334788999999999999999999998   9999999999999999999999999999886322


Q ss_pred             cccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhH---------hhhc-cCc
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHA---------WDLW-KDD  700 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~---------~~~~-~~~  700 (795)
                        ...+..+.|.+|.|||.+.+ ..|...+||||+||++.||++|.+-|++.++-++.+....         ...+ ..+
T Consensus       156 --d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~  233 (396)
T KOG0593|consen  156 --DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNP  233 (396)
T ss_pred             --chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCC
Confidence              22344688999999998877 7999999999999999999999999998776555333221         1111 111


Q ss_pred             ccccccCcccc-----chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          701 RAWELIDPTLQ-----NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       701 ~~~~~id~~l~-----~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ....+.-|...     +...+.....+++++..||+.||.+|++-+|++.+
T Consensus       234 ~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H  284 (396)
T KOG0593|consen  234 FFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH  284 (396)
T ss_pred             ceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence            11111111111     11223344577899999999999999999999876

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-42  Score=370.21  Aligned_cols=254  Identities=33%  Similarity=0.501  Sum_probs=214.9

Q ss_pred             cCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCC
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMP  554 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~  554 (795)
                      +.+.+++.||+|.||.||.|++.....||+|.+... ....+.|.+|+++|++|+|++||+++++|..++.++||||||+
T Consensus       206 ~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~  284 (468)
T KOG0197|consen  206 EELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMP  284 (468)
T ss_pred             HHHHHHHHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecc
Confidence            345677899999999999999977779999999654 3456788999999999999999999999999999999999999


Q ss_pred             CCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcccc
Q 003786          555 NKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQS  634 (795)
Q Consensus       555 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~  634 (795)
                      .|+|.++|.. .....+...+.+.++.|||+|++||++++   +|||||.++||||+++..+||+|||||+....+....
T Consensus       285 ~GsLl~yLr~-~~~~~l~~~~Ll~~a~qIaeGM~YLes~~---~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~  360 (468)
T KOG0197|consen  285 KGSLLDYLRT-REGGLLNLPQLLDFAAQIAEGMAYLESKN---YIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTA  360 (468)
T ss_pred             cCcHHHHhhh-cCCCccchHHHHHHHHHHHHHHHHHHhCC---ccchhhhhhheeeccCceEEEcccccccccCCCceee
Confidence            9999999965 34456888999999999999999999998   9999999999999999999999999999655444432


Q ss_pred             cccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCccccch
Q 003786          635 KTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNE  713 (795)
Q Consensus       635 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~  713 (795)
                      . ....-...|.|||.+....|+.|+|||||||+|+||+| |+.|++.....               ++.+.++...+-+
T Consensus       361 ~-~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~---------------ev~~~le~GyRlp  424 (468)
T KOG0197|consen  361 S-EGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNE---------------EVLELLERGYRLP  424 (468)
T ss_pred             c-CCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHH---------------HHHHHHhccCcCC
Confidence            2 22233668999999999999999999999999999998 55565543321               2233445555566


Q ss_pred             hhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          714 ASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       714 ~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      .+..++..+.+|+..||+.+|++|||++.+...|+.
T Consensus       425 ~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~  460 (468)
T KOG0197|consen  425 RPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLED  460 (468)
T ss_pred             CCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHH
Confidence            777788899999999999999999999999988876

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=3.2e-41  Score=328.76  Aligned_cols=274  Identities=25%  Similarity=0.326  Sum_probs=212.8

Q ss_pred             cCCccccccCcCCcccEEEeEe-cCcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          475 ANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      .+|...++||+|.||.||+|++ ++|+.||||++....  +.-.....+|++.|+.++|+||+.++++|.+.+...+|+|
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE   81 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE   81 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence            4688889999999999999985 569999999996542  2224567899999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      ||+. +|+..+.+  +...+....+..++.++++||+|||.+.   |+||||||+|+|++++|.+||+|||+++.+....
T Consensus        82 fm~t-dLe~vIkd--~~i~l~pa~iK~y~~m~LkGl~y~H~~~---IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~  155 (318)
T KOG0659|consen   82 FMPT-DLEVVIKD--KNIILSPADIKSYMLMTLKGLAYCHSKW---ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPN  155 (318)
T ss_pred             eccc-cHHHHhcc--cccccCHHHHHHHHHHHHHHHHHHHhhh---hhcccCCccceEEcCCCcEEeecccchhccCCCC
Confidence            9975 78777744  3456888999999999999999999998   9999999999999999999999999999987654


Q ss_pred             cccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcch-hHhHhHhhhccCcccccc----
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSL-TLLGHAWDLWKDDRAWEL----  705 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~----  705 (795)
                      ...  ...+-|..|.|||.+.+ ..|+..+|+||.|||+.||+.|.+-|++.++-++ ..+-.+-....+....++    
T Consensus       156 ~~~--~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lp  233 (318)
T KOG0659|consen  156 RIQ--THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLP  233 (318)
T ss_pred             ccc--ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccc
Confidence            322  22377999999998877 5899999999999999999999988776553332 221111111111111111    


Q ss_pred             -------cCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccccCCCCC
Q 003786          706 -------IDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPH  756 (795)
Q Consensus       706 -------id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~~~l~~  756 (795)
                             ..+...+..-.......++++..|+..||.+|++++|+++|-.....+.|.
T Consensus       234 dY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~pt  291 (318)
T KOG0659|consen  234 DYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPLPT  291 (318)
T ss_pred             cHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCCCC
Confidence                   111111112334455679999999999999999999999987665433333

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-41  Score=362.26  Aligned_cols=250  Identities=27%  Similarity=0.406  Sum_probs=211.9

Q ss_pred             cCCccccccCcCCcccEEEeEe-cCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecC
Q 003786          475 ANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYM  553 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  553 (795)
                      ..|...++||+|+.|.||.++. .+++.||||++........+-+.+|+.+|+..+|+|||++++.|...+.++.|||||
T Consensus       273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym  352 (550)
T KOG0578|consen  273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM  352 (550)
T ss_pred             hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence            5678889999999999999974 468899999998877677788999999999999999999999999999999999999


Q ss_pred             CCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccc
Q 003786          554 PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ  633 (795)
Q Consensus       554 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~  633 (795)
                      +||+|.+.+.    ...+++.++..+++++++||+|||.++   |+|||||.+|||++.+|.+||+|||++..+..... 
T Consensus       353 ~ggsLTDvVt----~~~~~E~qIA~Icre~l~aL~fLH~~g---IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~-  424 (550)
T KOG0578|consen  353 EGGSLTDVVT----KTRMTEGQIAAICREILQGLKFLHARG---IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS-  424 (550)
T ss_pred             CCCchhhhhh----cccccHHHHHHHHHHHHHHHHHHHhcc---eeeeccccceeEeccCCcEEEeeeeeeeccccccC-
Confidence            9999999883    344899999999999999999999998   99999999999999999999999999998765543 


Q ss_pred             ccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccch
Q 003786          634 SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNE  713 (795)
Q Consensus       634 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~  713 (795)
                       ...+.+|||.|||||++....|++|+||||||+++.||+-|.+|+-....-     ...+.....+.      +  .-.
T Consensus       425 -KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~Pl-----rAlyLIa~ng~------P--~lk  490 (550)
T KOG0578|consen  425 -KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPL-----RALYLIATNGT------P--KLK  490 (550)
T ss_pred             -ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChH-----HHHHHHhhcCC------C--CcC
Confidence             445689999999999999999999999999999999999999998542211     11111111111      1  112


Q ss_pred             hhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          714 ASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       714 ~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .+......+.+++.+||+.|+++||++.|+|+|
T Consensus       491 ~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H  523 (550)
T KOG0578|consen  491 NPEKLSPELKDFLDRCLVVDVEQRASAKELLEH  523 (550)
T ss_pred             CccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence            334455678899999999999999999999985

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=7e-41  Score=355.99  Aligned_cols=273  Identities=22%  Similarity=0.279  Sum_probs=214.3

Q ss_pred             HccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCc---cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeE
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG---QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKIL  548 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  548 (795)
                      ..++|+++++||+|+||.||+|+.+ +|..+|+|++++...   ...+..+.|-.+|...++|.||+||..|++.+.+||
T Consensus       139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL  218 (550)
T KOG0605|consen  139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL  218 (550)
T ss_pred             CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence            5689999999999999999999865 599999999987643   344667899999999999999999999999999999


Q ss_pred             EeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccC
Q 003786          549 IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      ||||++||++..+|   .+.+.|+++.+..++.+++.||..||+.|   +|||||||+|+|||..|++||+||||+.-+.
T Consensus       219 iMEylPGGD~mTLL---~~~~~L~e~~arfYiaE~vlAI~~iH~~g---yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~  292 (550)
T KOG0605|consen  219 IMEYLPGGDMMTLL---MRKDTLTEDWARFYIAETVLAIESIHQLG---YIHRDIKPDNLLIDAKGHIKLSDFGLSTGLD  292 (550)
T ss_pred             EEEecCCccHHHHH---HhcCcCchHHHHHHHHHHHHHHHHHHHcC---cccccCChhheeecCCCCEeeccccccchhh
Confidence            99999999999999   45677999999999999999999999998   9999999999999999999999999985321


Q ss_pred             C----------------------Ccccc-----c------------------ccccccccccccccccccCCCCcccchh
Q 003786          629 G----------------------DELQS-----K------------------TKRIVGTYGYMSPEYAQQGLFSIKSDVF  663 (795)
Q Consensus       629 ~----------------------~~~~~-----~------------------~~~~~gt~~y~APE~~~~~~~~~k~Dvw  663 (795)
                      .                      .+...     .                  ....+|||.|||||++.+..|+..+|+|
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwW  372 (550)
T KOG0605|consen  293 KKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWW  372 (550)
T ss_pred             hhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHH
Confidence            0                      00010     0                  1235799999999999999999999999


Q ss_pred             hHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCC---CH
Q 003786          664 SFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRP---TM  740 (795)
Q Consensus       664 SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RP---t~  740 (795)
                      |||||+||||.|.+||........---...|...            +..+.......+..++|.+||. ||++|.   .+
T Consensus       373 SLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~------------l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~  439 (550)
T KOG0605|consen  373 SLGCIMYEMLVGYPPFCSETPQETYRKIVNWRET------------LKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGA  439 (550)
T ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhh------------ccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccH
Confidence            9999999999999999765543321111112110            0001111122577889999999 999997   57


Q ss_pred             HHHHHHHccccCC------CCCCCCCCccc
Q 003786          741 FEVVSMLTNKTIN------LPHPRQPAFSS  764 (795)
Q Consensus       741 ~evl~~L~~~~~~------l~~p~~p~~~~  764 (795)
                      .||.+|--.....      .+.|..|....
T Consensus       440 ~EIK~HPfF~~v~W~~l~~~~apfvP~v~~  469 (550)
T KOG0605|consen  440 EEIKKHPFFKGVDWDHLREMPAPFVPQVNS  469 (550)
T ss_pred             HHHhcCCccccCCcchhhcCCCCCCCCCCC
Confidence            8888764332222      34555555443

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=6.6e-41  Score=331.14  Aligned_cols=237  Identities=27%  Similarity=0.364  Sum_probs=200.6

Q ss_pred             ccCCccccccCcCCcccEEEeEecC-cceEEEEEecccCc---cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSG---QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      .++|+..+.||.|+||.|.+++.+. |..+|+|++.+..-   ...+...+|..+|+.+.||+++++++.|.+.+.++||
T Consensus        43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv  122 (355)
T KOG0616|consen   43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV  122 (355)
T ss_pred             hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence            4789999999999999999999764 78899999987532   2345677899999999999999999999999999999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      |||++||.|..+++.   .+.+++..+..++.||+.||+|||+.+   |++|||||+|||||.+|.+||+|||+|+....
T Consensus       123 meyv~GGElFS~Lrk---~~rF~e~~arFYAAeivlAleylH~~~---iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~  196 (355)
T KOG0616|consen  123 MEYVPGGELFSYLRK---SGRFSEPHARFYAAEIVLALEYLHSLD---IIYRDLKPENLLLDQNGHIKITDFGFAKRVSG  196 (355)
T ss_pred             EeccCCccHHHHHHh---cCCCCchhHHHHHHHHHHHHHHHHhcC---eeeccCChHHeeeccCCcEEEEeccceEEecC
Confidence            999999999999954   345899999999999999999999998   99999999999999999999999999997642


Q ss_pred             CcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcc
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT  709 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~  709 (795)
                           .+-+.+|||.|+|||++..+.|..++|+|||||++|||+.|.+||-....  ......    .-+++        
T Consensus       197 -----rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~--~~iY~K----I~~~~--------  257 (355)
T KOG0616|consen  197 -----RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP--IQIYEK----ILEGK--------  257 (355)
T ss_pred             -----cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh--HHHHHH----HHhCc--------
Confidence                 35678999999999999999999999999999999999999999965443  211111    11111        


Q ss_pred             ccchhhHHHHHHHHHHHHhhccCCCCCC
Q 003786          710 LQNEASYLILNRYINVGLLCVQEDAADR  737 (795)
Q Consensus       710 l~~~~~~~~~~~l~~li~~cL~~dP~~R  737 (795)
                      +  ..+......+.+|+...|+.|-.+|
T Consensus       258 v--~fP~~fs~~~kdLl~~LL~vD~t~R  283 (355)
T KOG0616|consen  258 V--KFPSYFSSDAKDLLKKLLQVDLTKR  283 (355)
T ss_pred             c--cCCcccCHHHHHHHHHHHhhhhHhh
Confidence            1  1233344567789999999999999

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.2e-40  Score=351.03  Aligned_cols=268  Identities=24%  Similarity=0.307  Sum_probs=208.4

Q ss_pred             HccCCccccccCcCCcccEEEeEe-cCcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeec--ceee
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL--EEKI  547 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~  547 (795)
                      ..+.|+.+++||+|.||.||+|+. .+|+.||+|+++...  ......+.+|+.||++|+||||++|.+...+.  ..+|
T Consensus       115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siY  194 (560)
T KOG0600|consen  115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIY  194 (560)
T ss_pred             chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEE
Confidence            346789999999999999999985 569999999997654  44456778999999999999999999998876  6899


Q ss_pred             EEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccccc
Q 003786          548 LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF  627 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~  627 (795)
                      ||+|||++. |.-++.  ...-.+++.++..++.|++.||.|+|..+   |+|||||.+|||||.+|.+||+|||||+++
T Consensus       195 lVFeYMdhD-L~GLl~--~p~vkft~~qIKc~mkQLl~Gl~~cH~~g---vlHRDIK~SNiLidn~G~LKiaDFGLAr~y  268 (560)
T KOG0600|consen  195 LVFEYMDHD-LSGLLS--SPGVKFTEPQIKCYMKQLLEGLEYCHSRG---VLHRDIKGSNILIDNNGVLKIADFGLARFY  268 (560)
T ss_pred             EEEecccch-hhhhhc--CCCcccChHHHHHHHHHHHHHHHHHhhcC---eeeccccccceEEcCCCCEEeccccceeec
Confidence            999999874 444442  22335889999999999999999999998   999999999999999999999999999988


Q ss_pred             CCCccccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcch-hHhHhHhh-----hccCc
Q 003786          628 GGDELQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSL-TLLGHAWD-----LWKDD  700 (795)
Q Consensus       628 ~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~-~~~~~~~~-----~~~~~  700 (795)
                      ....... .+..+-|..|.|||++.+ ..|+.++|+||.||||.||+.|++.+.+..+-.+ ..+-....     .|...
T Consensus       269 ~~~~~~~-~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~  347 (560)
T KOG0600|consen  269 TPSGSAP-YTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVS  347 (560)
T ss_pred             cCCCCcc-cccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccc
Confidence            6554332 344677999999998877 5899999999999999999999999988764332 22211111     11111


Q ss_pred             cc--ccccCcccc-----chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          701 RA--WELIDPTLQ-----NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       701 ~~--~~~id~~l~-----~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                      ++  ...+.+...     .+.....+...++|+..+|..||.+|.|+.++|+.=
T Consensus       348 kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~se  401 (560)
T KOG0600|consen  348 KLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSE  401 (560)
T ss_pred             cCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCc
Confidence            11  111111110     111233456778999999999999999999999853

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-41  Score=355.02  Aligned_cols=267  Identities=24%  Similarity=0.306  Sum_probs=209.1

Q ss_pred             HccCCccccccCcCCcccEEEeEe-cCcceEEEEEecccCccchHH-HHHHHHHHHhcC-Ccccceeeeeeeecc-eeeE
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQEE-FKNEIKLIAKLQ-HRNLVRLLGCCIELE-EKIL  548 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~-~~~E~~~l~~l~-h~niv~l~~~~~~~~-~~~l  548 (795)
                      ..++|.+.++||.|.||.||+|+. .++..||||+++++...-.+. =.+|++.|++|+ |||||+|++++.+.+ .+++
T Consensus         8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f   87 (538)
T KOG0661|consen    8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF   87 (538)
T ss_pred             HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence            347899999999999999999984 468899999997654332222 248999999998 999999999999988 9999


Q ss_pred             EeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccC
Q 003786          549 IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      |||||+. +|..++.+.  ++.+++..+..|+.||++||+|+|.+|   ++|||+||+|||+.....+||+|||+|+...
T Consensus        88 VfE~Md~-NLYqLmK~R--~r~fse~~irnim~QilqGL~hiHk~G---fFHRDlKPENiLi~~~~~iKiaDFGLARev~  161 (538)
T KOG0661|consen   88 VFEFMDC-NLYQLMKDR--NRLFSESDIRNIMYQILQGLAHIHKHG---FFHRDLKPENILISGNDVIKIADFGLAREVR  161 (538)
T ss_pred             eHHhhhh-hHHHHHhhc--CCcCCHHHHHHHHHHHHHHHHHHHhcC---cccccCChhheEecccceeEecccccccccc
Confidence            9999975 677777443  778999999999999999999999998   9999999999999989999999999999875


Q ss_pred             CCccccccccccccccccccccc-ccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhH--hHh----HhhhccCc-
Q 003786          629 GDELQSKTKRIVGTYGYMSPEYA-QQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTL--LGH----AWDLWKDD-  700 (795)
Q Consensus       629 ~~~~~~~~~~~~gt~~y~APE~~-~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~--~~~----~~~~~~~~-  700 (795)
                      ....   .+..+.|.+|.|||++ +...|+.+.|+|++|||++|+.+-++-|++.++-++-+  +..    .+..|.++ 
T Consensus       162 SkpP---YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~  238 (538)
T KOG0661|consen  162 SKPP---YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGY  238 (538)
T ss_pred             cCCC---cchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHH
Confidence            4432   3446789999999976 66899999999999999999999999998876444321  110    01111110 


Q ss_pred             ccccccC--------ccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          701 RAWELID--------PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       701 ~~~~~id--------~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      .....+.        ..+.. .-.....++++++..|++.||.+|||+.|.+++--.
T Consensus       239 ~La~~mnf~~P~~~~~~l~~-L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pff  294 (538)
T KOG0661|consen  239 NLASAMNFRFPQVKPSPLKD-LLPNASSEAASLIERLLAWDPDKRPTASQALQHPFF  294 (538)
T ss_pred             HHHHHhccCCCcCCCCChHH-hCcccCHHHHHHHHHHhcCCCccCccHHHHhcCccc
Confidence            0000011        11111 112256788999999999999999999999998533

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.6e-40  Score=343.32  Aligned_cols=264  Identities=23%  Similarity=0.345  Sum_probs=212.7

Q ss_pred             HccCCccccccCcCCcccEEEeEe-cCcceEEEEEecccCc-cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      ..++|++...||.|..++||+|+. +.+..||||++.-+.- ...+.+++|++.|+.++||||++++..|..+..+++||
T Consensus        24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVm  103 (516)
T KOG0582|consen   24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVM  103 (516)
T ss_pred             CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEee
Confidence            457899999999999999999984 5689999999975432 33588999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      .||.+||+.+++...-..+ +++..+..|.+++++||.|||++|   .||||||+.||||+.+|.|||+|||....+-..
T Consensus       104 pfMa~GS~ldIik~~~~~G-l~E~~Ia~iLre~LkaL~YLH~~G---~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~  179 (516)
T KOG0582|consen  104 PFMAGGSLLDIIKTYYPDG-LEEASIATILREVLKALDYLHQNG---HIHRDVKAGNILIDSDGTVKLADFGVSASLFDS  179 (516)
T ss_pred             hhhcCCcHHHHHHHHcccc-ccHHHHHHHHHHHHHHHHHHHhcC---ceecccccccEEEcCCCcEEEcCceeeeeeccc
Confidence            9999999999996544433 889999999999999999999998   999999999999999999999999997754222


Q ss_pred             c--cccccccccccccccccccccc--CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCccccccc
Q 003786          631 E--LQSKTKRIVGTYGYMSPEYAQQ--GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELI  706 (795)
Q Consensus       631 ~--~~~~~~~~~gt~~y~APE~~~~--~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i  706 (795)
                      .  .......++||+.|||||+++.  ..|+.|+||||||++..||.+|..||.....-...+....      +....+.
T Consensus       180 G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLq------n~pp~~~  253 (516)
T KOG0582|consen  180 GDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQ------NDPPTLL  253 (516)
T ss_pred             CceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhc------CCCCCcc
Confidence            1  1122256799999999999654  4799999999999999999999999975443333222111      1111111


Q ss_pred             CccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          707 DPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       707 d~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      -..+..+........+.+++..||+.||.+|||+++++++
T Consensus       254 t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh  293 (516)
T KOG0582|consen  254 TSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH  293 (516)
T ss_pred             cccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence            1122223334445578899999999999999999999986

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=7e-41  Score=349.74  Aligned_cols=256  Identities=29%  Similarity=0.421  Sum_probs=204.0

Q ss_pred             ccCCccccccCcCCcccEEEeEecC-cceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecc--eeeEEe
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELE--EKILIY  550 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv~  550 (795)
                      ..+|...+.||+|+||.||++...+ |...|||.+........+.+.+|+.+|.+++|||||+++|.....+  ..+++|
T Consensus        16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~m   95 (313)
T KOG0198|consen   16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFM   95 (313)
T ss_pred             cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeee
Confidence            3567888999999999999998654 8999999986653333677999999999999999999999855544  588999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECC-CCCeeeeccccccccCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDK-DMNPKISDFGMARIFGG  629 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~-~~~vkL~DFGla~~~~~  629 (795)
                      ||+++|+|.+++.....  .+++..+..+..||++||.|||+++   ||||||||+||||+. ++.+||+|||+++....
T Consensus        96 Ey~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylHs~g---~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~  170 (313)
T KOG0198|consen   96 EYAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLHSKG---IVHCDIKPANILLDPSNGDVKLADFGLAKKLES  170 (313)
T ss_pred             eccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhCC---EeccCcccceEEEeCCCCeEEeccCcccccccc
Confidence            99999999999954432  5999999999999999999999998   999999999999999 79999999999987653


Q ss_pred             -CcccccccccccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccC
Q 003786          630 -DELQSKTKRIVGTYGYMSPEYAQQG-LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID  707 (795)
Q Consensus       630 -~~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id  707 (795)
                       ...........||+.|||||++..+ ....++|||||||++.||+||.+||...........    ......       
T Consensus       171 ~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~----~ig~~~-------  239 (313)
T KOG0198|consen  171 KGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALL----LIGRED-------  239 (313)
T ss_pred             ccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHH----HHhccC-------
Confidence             1112233457899999999999864 334599999999999999999999864210000000    001111       


Q ss_pred             ccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          708 PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       708 ~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                        ....++...+....+++.+|++.+|++||||+++|++.
T Consensus       240 --~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hp  277 (313)
T KOG0198|consen  240 --SLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHP  277 (313)
T ss_pred             --CCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhCh
Confidence              11134444566778999999999999999999999975

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.8e-40  Score=359.51  Aligned_cols=251  Identities=26%  Similarity=0.388  Sum_probs=208.0

Q ss_pred             HHccCCccccccCcCCcccEEEeEe-cCcceEEEEEeccc----Cc-cchHHHHHHHHHHHhcC-Ccccceeeeeeeecc
Q 003786          472 AATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQ----SG-QGQEEFKNEIKLIAKLQ-HRNLVRLLGCCIELE  544 (795)
Q Consensus       472 ~~~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~  544 (795)
                      ...++|.+++.||+|+||+|+.|++ .+++.||+|++.+.    .. ...+.+.+|+.++++++ ||||+++++++....
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~   93 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT   93 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence            3457899999999999999999975 46899999977654    22 34567789999999999 999999999999999


Q ss_pred             eeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCC-CCeeeecccc
Q 003786          545 EKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKD-MNPKISDFGM  623 (795)
Q Consensus       545 ~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~-~~vkL~DFGl  623 (795)
                      +.++||||+.+|.|.+++..   .+.+.+..+..++.|++.|++|+|+.+   |+||||||+|||++.+ +++||+|||+
T Consensus        94 ~~~ivmEy~~gGdL~~~i~~---~g~l~E~~ar~~F~Qlisav~y~H~~g---i~HRDLK~ENilld~~~~~~Kl~DFG~  167 (370)
T KOG0583|consen   94 KIYIVMEYCSGGDLFDYIVN---KGRLKEDEARKYFRQLISAVAYCHSRG---IVHRDLKPENILLDGNEGNLKLSDFGL  167 (370)
T ss_pred             eEEEEEEecCCccHHHHHHH---cCCCChHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEecCCCCCEEEecccc
Confidence            99999999999999999954   456888999999999999999999998   9999999999999999 9999999999


Q ss_pred             ccccCCCcccccccccccccccccccccccCC-CC-cccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcc
Q 003786          624 ARIFGGDELQSKTKRIVGTYGYMSPEYAQQGL-FS-IKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDR  701 (795)
Q Consensus       624 a~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~-~~-~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~  701 (795)
                      +....  .........+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||+..........      ...+.
T Consensus       168 s~~~~--~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~k------i~~~~  239 (370)
T KOG0583|consen  168 SAISP--GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRK------IRKGE  239 (370)
T ss_pred             ccccC--CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHH------HhcCC
Confidence            99873  1123456689999999999999877 75 889999999999999999999986332222111      11110


Q ss_pred             cccccCccccchhhHHH-HHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          702 AWELIDPTLQNEASYLI-LNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       702 ~~~~id~~l~~~~~~~~-~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                         .       ..+... ...+..++.+||+.+|.+|+++.+|+++
T Consensus       240 ---~-------~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h  275 (370)
T KOG0583|consen  240 ---F-------KIPSYLLSPEARSLIEKMLVPDPSTRITLLEILEH  275 (370)
T ss_pred             ---c-------cCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhC
Confidence               0       111112 5678899999999999999999999965

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-40  Score=361.13  Aligned_cols=272  Identities=21%  Similarity=0.287  Sum_probs=220.3

Q ss_pred             HHHccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcC-Ccccceeeeeeeecce
Q 003786          471 SAATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQ-HRNLVRLLGCCIELEE  545 (795)
Q Consensus       471 ~~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~  545 (795)
                      ....++|.+.++||+|.||+|+++..+ +++.+|||++++..   ..+.+..+.|.+|+.... ||+++.++.+|+..++
T Consensus       364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~  443 (694)
T KOG0694|consen  364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEH  443 (694)
T ss_pred             cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCe
Confidence            445689999999999999999999875 47889999998753   345677889999988775 9999999999999999


Q ss_pred             eeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccc
Q 003786          546 KILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR  625 (795)
Q Consensus       546 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~  625 (795)
                      +++||||+.||++..+    .+...+++..+..++..|+.||+|||+++   |||||||.+|||||.+|++||+||||++
T Consensus       444 l~fvmey~~Ggdm~~~----~~~~~F~e~rarfyaAev~l~L~fLH~~~---IIYRDlKLdNiLLD~eGh~kiADFGlcK  516 (694)
T KOG0694|consen  444 LFFVMEYVAGGDLMHH----IHTDVFSEPRARFYAAEVVLGLQFLHENG---IIYRDLKLDNLLLDTEGHVKIADFGLCK  516 (694)
T ss_pred             EEEEEEecCCCcEEEE----EecccccHHHHHHHHHHHHHHHHHHHhcC---ceeeecchhheEEcccCcEEeccccccc
Confidence            9999999999994332    34467999999999999999999999998   9999999999999999999999999999


Q ss_pred             ccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccc
Q 003786          626 IFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWEL  705 (795)
Q Consensus       626 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  705 (795)
                      ..-.  ....+++++|||.|||||++.+..|+.++|+|||||+|||||.|..||++.++++..-...     ..      
T Consensus       517 e~m~--~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~-----~d------  583 (694)
T KOG0694|consen  517 EGMG--QGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIV-----ND------  583 (694)
T ss_pred             ccCC--CCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHh-----cC------
Confidence            6432  2246778999999999999999999999999999999999999999998766544321110     00      


Q ss_pred             cCccccchhhHHHHHHHHHHHHhhccCCCCCCCCH-----HHHHHHHcc--------ccCCCCCCCCCCcccccc
Q 003786          706 IDPTLQNEASYLILNRYINVGLLCVQEDAADRPTM-----FEVVSMLTN--------KTINLPHPRQPAFSSIRG  767 (795)
Q Consensus       706 id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~-----~evl~~L~~--------~~~~l~~p~~p~~~~~~~  767 (795)
                       ++    ..+.....+.+.++.++|..+|++|.-+     .+|.++-=.        +...+++|..|...+.+.
T Consensus       584 -~~----~yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~L~~r~i~PPf~P~i~~~~D  653 (694)
T KOG0694|consen  584 -EV----RYPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDWDDLLNRRIKPPFVPTIKGPED  653 (694)
T ss_pred             -CC----CCCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCHHHHhhccCCCCCCcccCChhh
Confidence             11    1233455678889999999999999855     555554111        233467777777665444

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-40  Score=345.81  Aligned_cols=249  Identities=25%  Similarity=0.356  Sum_probs=211.3

Q ss_pred             cCCccccccCcCCcccEEEeEe-cCcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          475 ANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      ..|...+.||+|.||.||+|.. .+++.||+|++.-.. ....+.+++|+.+|..++++||.++|+.+..+..++++|||
T Consensus        13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey   92 (467)
T KOG0201|consen   13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY   92 (467)
T ss_pred             cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence            4577778999999999999985 468999999997654 34468899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      |.||++.+.+   .....+++..+.-++++++.|+.|||.++   .+|||||+.|||+..+|.+||+|||.+........
T Consensus        93 ~~gGsv~~lL---~~~~~~~E~~i~~ilre~l~~l~ylH~~~---kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~  166 (467)
T KOG0201|consen   93 CGGGSVLDLL---KSGNILDEFEIAVILREVLKGLDYLHSEK---KIHRDIKAANILLSESGDVKLADFGVAGQLTNTVK  166 (467)
T ss_pred             hcCcchhhhh---ccCCCCccceeeeehHHHHHHhhhhhhcc---eecccccccceeEeccCcEEEEecceeeeeechhh
Confidence            9999999988   33445588889999999999999999998   99999999999999999999999999987765543


Q ss_pred             cccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccc
Q 003786          633 QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQN  712 (795)
Q Consensus       633 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~  712 (795)
                      .  ..+++|||.|||||+++...|+.|+||||||++.+||++|.+|+.....               .++..+|.+....
T Consensus       167 r--r~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hP---------------mrvlflIpk~~PP  229 (467)
T KOG0201|consen  167 R--RKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHP---------------MRVLFLIPKSAPP  229 (467)
T ss_pred             c--cccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCc---------------ceEEEeccCCCCC
Confidence            3  3678999999999999988999999999999999999999999865433               2222233322222


Q ss_pred             hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          713 EASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       713 ~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .........+.+++..||..||+.||++.+++++
T Consensus       230 ~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh  263 (467)
T KOG0201|consen  230 RLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKH  263 (467)
T ss_pred             ccccccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence            2333556678899999999999999999999986

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=9.4e-40  Score=357.16  Aligned_cols=260  Identities=28%  Similarity=0.385  Sum_probs=202.7

Q ss_pred             ccCCccccccCcCCcccEEEeEe------cCcceEEEEEecccCc-cchHHHHHHHHHHHhc-CCcccceeeeeeeecc-
Q 003786          474 TANFSTENKLGEGGFGPVYKGRL------LNGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELE-  544 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~-  544 (795)
                      .++|++.++||+|+||.||+|++      .+++.||||++..... .....+.+|+.+|+++ +||||+++++++...+ 
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~   85 (338)
T cd05102           6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG   85 (338)
T ss_pred             hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence            46799999999999999999964      2356799999865432 2345788999999999 8999999999887654 


Q ss_pred             eeeEEeecCCCCChhhhhhccCC---------------------------------------------------------
Q 003786          545 EKILIYEYMPNKSLDFFLFDSTK---------------------------------------------------------  567 (795)
Q Consensus       545 ~~~lv~E~~~~gsL~~~l~~~~~---------------------------------------------------------  567 (795)
                      ..++||||+++|+|.+++.....                                                         
T Consensus        86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (338)
T cd05102          86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD  165 (338)
T ss_pred             ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence            57899999999999998864221                                                         


Q ss_pred             --cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccccccccccccccc
Q 003786          568 --ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY  645 (795)
Q Consensus       568 --~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y  645 (795)
                        ...+++..+..++.||++||.|||+.+   |+||||||+|||++.++.+||+|||+++...............+++.|
T Consensus       166 ~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y  242 (338)
T cd05102         166 LWKSPLTMEDLICYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKW  242 (338)
T ss_pred             cccCCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccc
Confidence              124677788999999999999999988   999999999999999999999999999865332222222334567889


Q ss_pred             ccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhhHHHHHHHHH
Q 003786          646 MSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYIN  724 (795)
Q Consensus       646 ~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~  724 (795)
                      +|||++.+..++.++|||||||++|||++ |..||+....... ...    ....+...         ..+...+..+.+
T Consensus       243 ~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~-~~~----~~~~~~~~---------~~~~~~~~~l~~  308 (338)
T cd05102         243 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE-FCQ----RLKDGTRM---------RAPENATPEIYR  308 (338)
T ss_pred             cCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH-HHH----HHhcCCCC---------CCCCCCCHHHHH
Confidence            99999999999999999999999999997 9999876432221 111    11111110         011223456789


Q ss_pred             HHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          725 VGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       725 li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                      ++.+||+.+|++|||+.||+++|+..
T Consensus       309 li~~cl~~dp~~RPs~~el~~~l~~~  334 (338)
T cd05102         309 IMLACWQGDPKERPTFSALVEILGDL  334 (338)
T ss_pred             HHHHHccCChhhCcCHHHHHHHHHHH
Confidence            99999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=4.9e-40  Score=355.49  Aligned_cols=247  Identities=27%  Similarity=0.358  Sum_probs=210.1

Q ss_pred             cCCccccccCcCCcccEEEeEe-cCcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          475 ANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      +-|++++.||.|+.|.|-+|++ .+|+..|||++.+..   ......+.+|+.+|+.+.||||+++|+++.+..++|+|.
T Consensus        12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl   91 (786)
T KOG0588|consen   12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL   91 (786)
T ss_pred             cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence            5689999999999999999986 579999999997652   223467889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      ||+++|.|.+++   .+.+.+++.++.+++.||+.|+.|+|..+   |+||||||+|+|||..+++||+|||||.+-.++
T Consensus        92 Eyv~gGELFdyl---v~kG~l~e~eaa~ff~QIi~gv~yCH~~~---icHRDLKpENlLLd~~~nIKIADFGMAsLe~~g  165 (786)
T KOG0588|consen   92 EYVPGGELFDYL---VRKGPLPEREAAHFFRQILDGVSYCHAFN---ICHRDLKPENLLLDVKNNIKIADFGMASLEVPG  165 (786)
T ss_pred             EecCCchhHHHH---HhhCCCCCHHHHHHHHHHHHHHHHHhhhc---ceeccCCchhhhhhcccCEeeeccceeecccCC
Confidence            999999999988   45567999999999999999999999998   999999999999999999999999999875443


Q ss_pred             cccccccccccccccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcc
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQQGLF-SIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT  709 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~~~~~-~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~  709 (795)
                      .   .-.+.||+|.|.|||++++.+| +.++||||.|||||.||+|+.||+..+...+  +..+    ..+.        
T Consensus       166 k---lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~L--LlKV----~~G~--------  228 (786)
T KOG0588|consen  166 K---LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVL--LLKV----QRGV--------  228 (786)
T ss_pred             c---cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHH--HHHH----HcCc--------
Confidence            3   3345799999999999999887 5899999999999999999999984433222  2111    1111        


Q ss_pred             ccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          710 LQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       710 l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                        -+.+..++.++.+|+.+||..||++|.|++||++|
T Consensus       229 --f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH  263 (786)
T KOG0588|consen  229 --FEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKH  263 (786)
T ss_pred             --ccCCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence              12334456678899999999999999999999997

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=5.1e-40  Score=348.21  Aligned_cols=247  Identities=27%  Similarity=0.383  Sum_probs=207.9

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      ++|.+.+.||+|.||.||+|+.+ +.+.||+|.+.+..  ....+.+.+|++|+++++|||||.+++.|+...+.++|+|
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte   81 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE   81 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence            57889999999999999999854 58899999997653  3345678899999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      |+.| +|..+|.   ..+.++++.+..++.++..||.|||+..   |+|||+||.|||++..|.+|++|||+|+......
T Consensus        82 ~a~g-~L~~il~---~d~~lpEe~v~~~a~~LVsaL~yLhs~r---ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t  154 (808)
T KOG0597|consen   82 YAVG-DLFTILE---QDGKLPEEQVRAIAYDLVSALYYLHSNR---ILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNT  154 (808)
T ss_pred             hhhh-hHHHHHH---hccCCCHHHHHHHHHHHHHHHHHHHhcC---cccccCCcceeeecCCCceeechhhhhhhcccCc
Confidence            9988 9999994   4556999999999999999999999987   9999999999999999999999999999775433


Q ss_pred             ccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcccc
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQ  711 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~  711 (795)
                        ...+...|||.|||||+..+++|+..+|.||||||+|||++|++||-....     .........++-.         
T Consensus       155 --~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si-----~~Lv~~I~~d~v~---------  218 (808)
T KOG0597|consen  155 --SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSI-----TQLVKSILKDPVK---------  218 (808)
T ss_pred             --eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHH-----HHHHHHHhcCCCC---------
Confidence              234557899999999999999999999999999999999999999853221     1111111111111         


Q ss_pred             chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          712 NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       712 ~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                        .+......+.+++...|+.||..|.+..+++.|
T Consensus       219 --~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H  251 (808)
T KOG0597|consen  219 --PPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGH  251 (808)
T ss_pred             --CcccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence              122455678899999999999999999999986

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=6.2e-40  Score=334.60  Aligned_cols=248  Identities=23%  Similarity=0.369  Sum_probs=210.9

Q ss_pred             ccCCccccccCcCCcccEEEeEe-cCcceEEEEEeccc---CccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          474 TANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQ---SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      -.+|++.+.||+|.||+|-+++. ..|+.||||.+++.   +.++...+++|++||..|+||||+.+|.+|...+...+|
T Consensus        52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv  131 (668)
T KOG0611|consen   52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV  131 (668)
T ss_pred             hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence            35799999999999999999974 77999999999765   344556788999999999999999999999999999999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      |||..+|.|.+++   ...+.+++.++.++++||..|+.|+|.++   ++|||||.+|||||.++++||+||||+.++..
T Consensus       132 MEYaS~GeLYDYi---Ser~~LsErEaRhfFRQIvSAVhYCHknr---VvHRDLKLENILLD~N~NiKIADFGLSNly~~  205 (668)
T KOG0611|consen  132 MEYASGGELYDYI---SERGSLSEREARHFFRQIVSAVHYCHKNR---VVHRDLKLENILLDQNNNIKIADFGLSNLYAD  205 (668)
T ss_pred             EEecCCccHHHHH---HHhccccHHHHHHHHHHHHHHHHHHhhcc---ceecccchhheeecCCCCeeeeccchhhhhcc
Confidence            9999999999999   44566999999999999999999999987   99999999999999999999999999998765


Q ss_pred             CcccccccccccccccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCc
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQGLF-SIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP  708 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~~~~-~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~  708 (795)
                      ..   ...+++|+|.|.+||++.+.+| .+.+|-|||||+||.|+.|..||++.+...+  +    .+...+...+   |
T Consensus       206 ~k---fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~l--v----rQIs~GaYrE---P  273 (668)
T KOG0611|consen  206 KK---FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRL--V----RQISRGAYRE---P  273 (668)
T ss_pred             cc---HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHH--H----HHhhcccccC---C
Confidence            54   3456899999999999999988 5889999999999999999999987553221  1    1122222211   1


Q ss_pred             cccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          709 TLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       709 ~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                              ..+....-||.|||..||++|.|+.+|..+.
T Consensus       274 --------~~PSdA~gLIRwmLmVNP~RRATieDiAsHW  304 (668)
T KOG0611|consen  274 --------ETPSDASGLIRWMLMVNPERRATIEDIASHW  304 (668)
T ss_pred             --------CCCchHHHHHHHHHhcCcccchhHHHHhhhh
Confidence                    1123456799999999999999999999874

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=7e-39  Score=344.87  Aligned_cols=267  Identities=28%  Similarity=0.448  Sum_probs=203.6

Q ss_pred             ccCCccccccCcCCcccEEEeEecC-----------------cceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccce
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLN-----------------GQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVR  535 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~  535 (795)
                      .++|++.++||+|+||.||+++..+                 +..||+|++.... ......+.+|+++|.+++||||++
T Consensus         4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~   83 (304)
T cd05096           4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR   83 (304)
T ss_pred             hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence            3578899999999999999997532                 3469999987543 233467899999999999999999


Q ss_pred             eeeeeeecceeeEEeecCCCCChhhhhhccC----------------CcccCChhhHHHHHHHHHHHHHHHHhcCCCcEE
Q 003786          536 LLGCCIELEEKILIYEYMPNKSLDFFLFDST----------------KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVI  599 (795)
Q Consensus       536 l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~----------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ii  599 (795)
                      +++++.+.+..++||||+++++|.+++....                ....+++..+..++.||+.||.|||+.+   |+
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---iv  160 (304)
T cd05096          84 LLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN---FV  160 (304)
T ss_pred             EEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC---cc
Confidence            9999999999999999999999999885421                1134677888999999999999999988   99


Q ss_pred             eccCCCCcEEECCCCCeeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCC
Q 003786          600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNT  679 (795)
Q Consensus       600 HrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~  679 (795)
                      ||||||+|||++.++.+||+|||+++...............++..|+|||++....++.++|||||||++|||+++..+.
T Consensus       161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~  240 (304)
T cd05096         161 HRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQ  240 (304)
T ss_pred             ccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCC
Confidence            99999999999999999999999998654333222233345678999999998889999999999999999999754443


Q ss_pred             CCCCCcchhHhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          680 DFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       680 ~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      ++........................      ...+...+..+.+++.+||+.+|++|||+.+|.++|+.
T Consensus       241 p~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~  304 (304)
T cd05096         241 PYGELTDEQVIENAGEFFRDQGRQVY------LFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE  304 (304)
T ss_pred             CCCcCCHHHHHHHHHHHhhhcccccc------ccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence            33332222222222111111110000      00112234578899999999999999999999998863

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=2.6e-39  Score=347.31  Aligned_cols=261  Identities=28%  Similarity=0.456  Sum_probs=208.8

Q ss_pred             HccCCccccccCcCCcccEEEeEecCcceEEEEEecccCc--cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSG--QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      ..+.+.+.++||+|.||+||+|++  ...||||++.....  +..+.|++|+.++++-+|.||+-+.|+|..... .+|+
T Consensus       390 p~~ev~l~~rIGsGsFGtV~Rg~w--hGdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiT  466 (678)
T KOG0193|consen  390 PPEEVLLGERIGSGSFGTVYRGRW--HGDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIIT  466 (678)
T ss_pred             CHHHhhccceeccccccceeeccc--ccceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeee
Confidence            345678889999999999999986  35799999976543  345789999999999999999999999998888 9999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      .+|.|-+|..+++...  ..++....+.|+.|||+|+.|||.++   |||||||..||+|.+++.|||+||||+..-..-
T Consensus       467 qwCeGsSLY~hlHv~e--tkfdm~~~idIAqQiaqGM~YLHAK~---IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w  541 (678)
T KOG0193|consen  467 QWCEGSSLYTHLHVQE--TKFDMNTTIDIAQQIAQGMDYLHAKN---IIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRW  541 (678)
T ss_pred             hhccCchhhhhccchh--hhhhHHHHHHHHHHHHHhhhhhhhhh---hhhhhccccceEEccCCcEEEecccceeeeeee
Confidence            9999999999996543  55888899999999999999999998   999999999999999999999999999753221


Q ss_pred             ccccccccccccccccccccccc---CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccC
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQQ---GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID  707 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~~---~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id  707 (795)
                      .-........|...|||||+++.   .+|++.+||||||+++|||++|..|+.....+++.        |..++-.-..|
T Consensus       542 ~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIi--------fmVGrG~l~pd  613 (678)
T KOG0193|consen  542 SGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQII--------FMVGRGYLMPD  613 (678)
T ss_pred             ccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheE--------EEecccccCcc
Confidence            11122233467889999999864   47999999999999999999999998743332221        11122111111


Q ss_pred             ccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccccC
Q 003786          708 PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTI  752 (795)
Q Consensus       708 ~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~~  752 (795)
                      ..   ....+.+.++.+|+..||..++++||.+.+|+.+|+....
T Consensus       614 ~s---~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~  655 (678)
T KOG0193|consen  614 LS---KIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP  655 (678)
T ss_pred             ch---hhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence            11   1233456688899999999999999999999998887443

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=6.7e-40  Score=367.26  Aligned_cols=259  Identities=30%  Similarity=0.451  Sum_probs=214.4

Q ss_pred             ccCCccccccCcCCcccEEEeEec------CcceEEEEEecccCcc-chHHHHHHHHHHHhcCCcccceeeeeeeeccee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL------NGQEVAVKRLSSQSGQ-GQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEK  546 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  546 (795)
                      ..+.+..+.||+|.||+||+|+..      +.+-||||.++..... ...+|++|+++|..++|||||+|+|+|.+++..
T Consensus       485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~  564 (774)
T KOG1026|consen  485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPL  564 (774)
T ss_pred             hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCee
Confidence            345667789999999999999742      3456999999876555 778999999999999999999999999999999


Q ss_pred             eEEeecCCCCChhhhhhccCC-----------cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCC
Q 003786          547 ILIYEYMPNKSLDFFLFDSTK-----------ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMN  615 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~-----------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~  615 (795)
                      ++|+|||..|+|.+||.....           ...++..+.+.|+.|||.|+.||-++.   +|||||..+|+||.++..
T Consensus       565 ~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~---FVHRDLATRNCLVge~l~  641 (774)
T KOG1026|consen  565 CMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH---FVHRDLATRNCLVGENLV  641 (774)
T ss_pred             EEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc---ccccchhhhhceeccceE
Confidence            999999999999999964332           223778899999999999999999887   999999999999999999


Q ss_pred             eeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHh
Q 003786          616 PKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAW  694 (795)
Q Consensus       616 vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~  694 (795)
                      |||+||||++.....++........-..+|||||.+..+.|+.++|||||||+|||+++ |+-|+.....++.-      
T Consensus       642 VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVI------  715 (774)
T KOG1026|consen  642 VKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVI------  715 (774)
T ss_pred             EEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHH------
Confidence            99999999998766655444333445789999999999999999999999999999997 66666543322211      


Q ss_pred             hhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          695 DLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       695 ~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                      .....+++         -+.+..++.++..|+..||+.+|++||+++||-..|..-
T Consensus       716 e~i~~g~l---------L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~  762 (774)
T KOG1026|consen  716 ECIRAGQL---------LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAW  762 (774)
T ss_pred             HHHHcCCc---------ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHH
Confidence            11122222         346667788999999999999999999999999998763

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=6.1e-39  Score=334.98  Aligned_cols=255  Identities=25%  Similarity=0.366  Sum_probs=202.9

Q ss_pred             HHccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC--------------ccchHHHHHHHHHHHhcCCccccee
Q 003786          472 AATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--------------GQGQEEFKNEIKLIAKLQHRNLVRL  536 (795)
Q Consensus       472 ~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--------------~~~~~~~~~E~~~l~~l~h~niv~l  536 (795)
                      ...++|++.+.||+|.||+|-+|+.. +++.||||++.+..              ....+..++|+.||++++|||||+|
T Consensus        94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L  173 (576)
T KOG0585|consen   94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL  173 (576)
T ss_pred             eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence            34588999999999999999999864 58999999997531              1123578899999999999999999


Q ss_pred             eeeeeec--ceeeEEeecCCCCChhhhhhccCCccc-CChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCC
Q 003786          537 LGCCIEL--EEKILIYEYMPNKSLDFFLFDSTKENL-LGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKD  613 (795)
Q Consensus       537 ~~~~~~~--~~~~lv~E~~~~gsL~~~l~~~~~~~~-l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~  613 (795)
                      +.+..+.  +++|||+|||..|.+...-    ..+. +++.++++++.++..||.|||.++   ||||||||+|+||+++
T Consensus       174 iEvLDDP~s~~~YlVley~s~G~v~w~p----~d~~els~~~Ar~ylrDvv~GLEYLH~Qg---iiHRDIKPsNLLl~~~  246 (576)
T KOG0585|consen  174 IEVLDDPESDKLYLVLEYCSKGEVKWCP----PDKPELSEQQARKYLRDVVLGLEYLHYQG---IIHRDIKPSNLLLSSD  246 (576)
T ss_pred             EEeecCcccCceEEEEEeccCCccccCC----CCcccccHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEEcCC
Confidence            9998754  6789999999999885432    2333 899999999999999999999998   9999999999999999


Q ss_pred             CCeeeeccccccccCCC---cccccccccccccccccccccccC----CCCcccchhhHHHHHHHHHhCCCCCCCCCCcc
Q 003786          614 MNPKISDFGMARIFGGD---ELQSKTKRIVGTYGYMSPEYAQQG----LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNS  686 (795)
Q Consensus       614 ~~vkL~DFGla~~~~~~---~~~~~~~~~~gt~~y~APE~~~~~----~~~~k~DvwSlGvil~elltG~~p~~~~~~~~  686 (795)
                      |+|||+|||.+..+...   ..........|||.|||||....+    ..+.+.||||+||+||.|+.|+.||-....  
T Consensus       247 g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~--  324 (576)
T KOG0585|consen  247 GTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFE--  324 (576)
T ss_pred             CcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchH--
Confidence            99999999999876221   222334457899999999987652    236788999999999999999999854221  


Q ss_pred             hhHhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          687 LTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       687 ~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                      +.+.    .        ++++..+.-...+++.+++.+||.++|+.||+.|.+..+|..|.
T Consensus       325 ~~l~----~--------KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hp  373 (576)
T KOG0585|consen  325 LELF----D--------KIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHP  373 (576)
T ss_pred             HHHH----H--------HHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecc
Confidence            1111    1        11222222223335566788999999999999999999999886

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.1e-39  Score=310.66  Aligned_cols=250  Identities=28%  Similarity=0.352  Sum_probs=210.5

Q ss_pred             HccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeE
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKIL  548 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  548 (795)
                      ..++|++++.||+|.||.||.|+.+ ++-.||+|++.+..   .+...++.+|++|-..|+||||+++|++|.+....||
T Consensus        20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyL   99 (281)
T KOG0580|consen   20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYL   99 (281)
T ss_pred             chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEE
Confidence            3478999999999999999999865 57789999997642   3445789999999999999999999999999999999


Q ss_pred             EeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccC
Q 003786          549 IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      ++||.+.|++...|... +.+.+++..+..++.|+|.||.|+|.++   ||||||||+|+|++..+.+||+|||.+..-.
T Consensus       100 ilEya~~gel~k~L~~~-~~~~f~e~~~a~Yi~q~A~Al~y~h~k~---VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p  175 (281)
T KOG0580|consen  100 ILEYAPRGELYKDLQEG-RMKRFDEQRAATYIKQLANALLYCHLKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAP  175 (281)
T ss_pred             EEEecCCchHHHHHHhc-ccccccccchhHHHHHHHHHHHHhccCC---cccCCCCHHHhccCCCCCeeccCCCceeecC
Confidence            99999999999988532 3456889999999999999999999988   9999999999999999999999999987543


Q ss_pred             CCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCc
Q 003786          629 GDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP  708 (795)
Q Consensus       629 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~  708 (795)
                          .....+.+||..|.+||...+..++.++|+|++|++.||++.|.+||+.... ...+-..        ...++.  
T Consensus       176 ----~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~-~etYkrI--------~k~~~~--  240 (281)
T KOG0580|consen  176 ----SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSH-SETYKRI--------RKVDLK--  240 (281)
T ss_pred             ----CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhh-HHHHHHH--------HHcccc--
Confidence                2345668999999999999999999999999999999999999999976542 1111110        111111  


Q ss_pred             cccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          709 TLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       709 ~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                           .+........++|..|+..+|.+|.+..|++++
T Consensus       241 -----~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h  273 (281)
T KOG0580|consen  241 -----FPSTISGGAADLISRLLVKNPIERLALTEVMDH  273 (281)
T ss_pred             -----CCcccChhHHHHHHHHhccCccccccHHHHhhh
Confidence                 123345577889999999999999999999886

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=2.3e-38  Score=350.72  Aligned_cols=259  Identities=28%  Similarity=0.367  Sum_probs=202.5

Q ss_pred             ccCCccccccCcCCcccEEEeEe------cCcceEEEEEecccC-ccchHHHHHHHHHHHhc-CCcccceeeeeeeecce
Q 003786          474 TANFSTENKLGEGGFGPVYKGRL------LNGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEE  545 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~  545 (795)
                      .++|++.++||+|+||.||+|+.      .++..||||++.... ....+.+.+|+.+|+.+ +||||+++++++.+.+.
T Consensus        34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~  113 (375)
T cd05104          34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP  113 (375)
T ss_pred             hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence            35789999999999999999963      235689999986432 23346788999999999 89999999999999999


Q ss_pred             eeEEeecCCCCChhhhhhccCC----------------------------------------------------------
Q 003786          546 KILIYEYMPNKSLDFFLFDSTK----------------------------------------------------------  567 (795)
Q Consensus       546 ~~lv~E~~~~gsL~~~l~~~~~----------------------------------------------------------  567 (795)
                      .++||||+++|+|.+++.....                                                          
T Consensus       114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (375)
T cd05104         114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS  193 (375)
T ss_pred             ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence            9999999999999988854221                                                          


Q ss_pred             --------------cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccc
Q 003786          568 --------------ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ  633 (795)
Q Consensus       568 --------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~  633 (795)
                                    ...+++..+..++.||++||.|||+.+   |+||||||+|||++.++.+||+|||+++........
T Consensus       194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~  270 (375)
T cd05104         194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY  270 (375)
T ss_pred             ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence                          124678889999999999999999988   999999999999999999999999999865433221


Q ss_pred             ccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCccccc
Q 003786          634 SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQN  712 (795)
Q Consensus       634 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~  712 (795)
                      .......++..|+|||.+.+..++.++|||||||++|||++ |..|+........ ...    .......         .
T Consensus       271 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~-~~~----~~~~~~~---------~  336 (375)
T cd05104         271 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSK-FYK----MIKEGYR---------M  336 (375)
T ss_pred             cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHH-HHH----HHHhCcc---------C
Confidence            12222345678999999999999999999999999999998 7877754332211 111    1111100         0


Q ss_pred             hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          713 EASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       713 ~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      ..+...+.++.+++.+||+.+|++||++.||+++|+.
T Consensus       337 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~  373 (375)
T cd05104         337 LSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ  373 (375)
T ss_pred             CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence            0111123568899999999999999999999999976

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=5.4e-38  Score=342.12  Aligned_cols=264  Identities=22%  Similarity=0.312  Sum_probs=205.3

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      .++|++.+.||+|+||.||+++.. ++..+|+|++.... ....+.+.+|+++|++++||||+++++++...+..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence            478999999999999999999865 58889999986542 2334678999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      |+++++|.+++..   ...+++..+..++.|++.||.|||+.+  +|+||||||+|||++.++.+||+|||++...... 
T Consensus        84 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-  157 (331)
T cd06649          84 HMDGGSLDQVLKE---AKRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-  157 (331)
T ss_pred             cCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCccccccccc-
Confidence            9999999999843   335788999999999999999999853  4999999999999999999999999998765322 


Q ss_pred             ccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhcc-Cccc--------
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWK-DDRA--------  702 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~-~~~~--------  702 (795)
                         ......|++.|+|||++.+..++.++|||||||++|||++|+.||............. ..... ....        
T Consensus       158 ---~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  233 (331)
T cd06649         158 ---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFG-RPVVDGEEGEPHSISPRP  233 (331)
T ss_pred             ---ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhc-ccccccccCCccccCccc
Confidence               2234578999999999999999999999999999999999999996543221110000 00000 0000        


Q ss_pred             --------------------ccccC----ccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          703 --------------------WELID----PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       703 --------------------~~~id----~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                                          .++.+    ..............+.+++.+||+.||++|||++||+++.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~  302 (331)
T cd06649         234 RPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHT  302 (331)
T ss_pred             ccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence                                00000    0000000112446788999999999999999999999864

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=3.7e-38  Score=335.55  Aligned_cols=243  Identities=22%  Similarity=0.321  Sum_probs=197.1

Q ss_pred             cccCcCCcccEEEeEecCcceEEEEEecccCccc---hHHHHHHHHHHHhcCCcccceeeeeeee----cceeeEEeecC
Q 003786          481 NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQG---QEEFKNEIKLIAKLQHRNLVRLLGCCIE----LEEKILIYEYM  553 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~E~~  553 (795)
                      ..||+|+++.||+|.. +|+.||||++.......   .+.+.+|+.+|++++||||+++++++.+    ....++||||+
T Consensus        26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~  104 (283)
T PHA02988         26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC  104 (283)
T ss_pred             eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence            6799999999999987 78999999997653333   4677899999999999999999999877    34678999999


Q ss_pred             CCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhc-CCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          554 PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY-SRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       554 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      ++|+|.+++..   ...+++..+..++.+++.||.|||+. +   ++||||||+|||+++++.+||+|||+++...... 
T Consensus       105 ~~g~L~~~l~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~---~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~-  177 (283)
T PHA02988        105 TRGYLREVLDK---EKDLSFKTKLDMAIDCCKGLYNLYKYTN---KPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP-  177 (283)
T ss_pred             CCCcHHHHHhh---CCCCChhHHHHHHHHHHHHHHHHHhcCC---CCCCcCChhhEEECCCCcEEEcccchHhhhcccc-
Confidence            99999999853   34588899999999999999999985 5   8899999999999999999999999998654322 


Q ss_pred             ccccccccccccccccccccc--CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccc
Q 003786          633 QSKTKRIVGTYGYMSPEYAQQ--GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL  710 (795)
Q Consensus       633 ~~~~~~~~gt~~y~APE~~~~--~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l  710 (795)
                          ....|+..|+|||++.+  ..++.++|||||||++|||++|+.||........  ....   ......     +  
T Consensus       178 ----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~--~~~i---~~~~~~-----~--  241 (283)
T PHA02988        178 ----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEI--YDLI---INKNNS-----L--  241 (283)
T ss_pred             ----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHH--HHHH---HhcCCC-----C--
Confidence                23468899999999976  6899999999999999999999999975432221  1111   001100     0  


Q ss_pred             cchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       711 ~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                        ..+...+..+.+++.+||+.||++|||++||++.|+.
T Consensus       242 --~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~  278 (283)
T PHA02988        242 --KLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSL  278 (283)
T ss_pred             --CCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHH
Confidence              1111234568899999999999999999999999876

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=1.1e-37  Score=332.40  Aligned_cols=252  Identities=24%  Similarity=0.320  Sum_probs=201.7

Q ss_pred             CCccccccCcCCcccEEEeEe-cCcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          476 NFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      .|+..+.||+|+||.||++.. .+++.||+|++.+..   ......+.+|+.++++++|+||+++++++.+.+..++|||
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence            377889999999999999986 468999999986532   2233567899999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      |+++|+|..++.... ...+++..+..++.|++.||+|||+.+   |+||||||+|||+++++.+||+|||++.......
T Consensus        81 ~~~~g~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~  156 (285)
T cd05631          81 IMNGGDLKFHIYNMG-NPGFDEQRAIFYAAELCCGLEDLQRER---IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE  156 (285)
T ss_pred             ecCCCcHHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC
Confidence            999999988775322 235788999999999999999999988   9999999999999999999999999998654322


Q ss_pred             ccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcccc
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQ  711 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~  711 (795)
                         ......||+.|+|||++.+..++.++|||||||++|||++|+.||...........  ........          .
T Consensus       157 ---~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~--~~~~~~~~----------~  221 (285)
T cd05631         157 ---TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREE--VDRRVKED----------Q  221 (285)
T ss_pred             ---eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHH--HHHHhhcc----------c
Confidence               12335789999999999999999999999999999999999999976443211100  00000000          0


Q ss_pred             chhhHHHHHHHHHHHHhhccCCCCCCCC-----HHHHHHH
Q 003786          712 NEASYLILNRYINVGLLCVQEDAADRPT-----MFEVVSM  746 (795)
Q Consensus       712 ~~~~~~~~~~l~~li~~cL~~dP~~RPt-----~~evl~~  746 (795)
                      ...+......+.+|+.+||+.||++||+     +++++++
T Consensus       222 ~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h  261 (285)
T cd05631         222 EEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH  261 (285)
T ss_pred             ccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence            1112223456788999999999999997     8888875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.9e-38  Score=344.69  Aligned_cols=254  Identities=22%  Similarity=0.320  Sum_probs=204.9

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      ++|++.++||+|+||.||+|+.. +++.||||++.+..   ....+.+.+|++++..++||||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   80 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM   80 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence            46899999999999999999875 48899999997542   223456889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      ||+++++|.+++..   ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++..... 
T Consensus        81 e~~~g~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~-  153 (333)
T cd05600          81 EYVPGGDFRTLLNN---LGVLSEDHARFYMAEMFEAVDALHELG---YIHRDLKPENFLIDASGHIKLTDFGLSKGIVT-  153 (333)
T ss_pred             eCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEEEeCcCCccccc-
Confidence            99999999999843   345888999999999999999999998   99999999999999999999999999986532 


Q ss_pred             cccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccc
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL  710 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l  710 (795)
                          ......||+.|+|||++.+..++.++|||||||++|||++|..||..............   +... .   -.+..
T Consensus       154 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~---~~~~-~---~~~~~  222 (333)
T cd05600         154 ----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKY---WKET-L---QRPVY  222 (333)
T ss_pred             ----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHh---cccc-c---cCCCC
Confidence                23346799999999999999999999999999999999999999975442221110000   0000 0   00100


Q ss_pred             cchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       711 ~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                       ..........+.+++.+||+.+|++||++.+++++.
T Consensus       223 -~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~  258 (333)
T cd05600         223 -DDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHP  258 (333)
T ss_pred             -CccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCc
Confidence             000122345778899999999999999999999873

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.2e-38  Score=338.83  Aligned_cols=246  Identities=23%  Similarity=0.260  Sum_probs=201.5

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      ++|++.+.||+|+||.||+|+.. +++.||+|++....   ....+.+.+|++++++++||||+++++++.+....++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   80 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM   80 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence            46889999999999999999875 58899999986432   223456889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      ||+++++|.+++..   ...+++..+..++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+++.....
T Consensus        81 e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~  154 (291)
T cd05612          81 EYVPGGELFSYLRN---SGRFSNSTGLFYASEIVCALEYLHSKE---IVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR  154 (291)
T ss_pred             eCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEEecCcchhccCC
Confidence            99999999998843   345888999999999999999999988   999999999999999999999999999865322


Q ss_pred             cccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccc
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL  710 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l  710 (795)
                           .....|++.|+|||++.+..++.++|||||||++|+|++|+.||........  ....    .....        
T Consensus       155 -----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~--~~~i----~~~~~--------  215 (291)
T cd05612         155 -----TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGI--YEKI----LAGKL--------  215 (291)
T ss_pred             -----cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHH----HhCCc--------
Confidence                 2235789999999999998999999999999999999999999865432111  1110    00000        


Q ss_pred             cchhhHHHHHHHHHHHHhhccCCCCCCCC-----HHHHHHHH
Q 003786          711 QNEASYLILNRYINVGLLCVQEDAADRPT-----MFEVVSML  747 (795)
Q Consensus       711 ~~~~~~~~~~~l~~li~~cL~~dP~~RPt-----~~evl~~L  747 (795)
                        ..+......+.+++.+||+.||.+||+     +++++++-
T Consensus       216 --~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~  255 (291)
T cd05612         216 --EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHR  255 (291)
T ss_pred             --CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCc
Confidence              011122346778999999999999995     89988763

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=2.2e-38  Score=350.52  Aligned_cols=259  Identities=29%  Similarity=0.403  Sum_probs=202.3

Q ss_pred             ccCCccccccCcCCcccEEEeEec------CcceEEEEEecccC-ccchHHHHHHHHHHHhc-CCcccceeeeeeeecce
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL------NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEE  545 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~  545 (795)
                      .++|++.+.||+|+||.||+|+..      +++.||||++.... ....+.+.+|+++++.+ +|||||++++++.....
T Consensus        37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~  116 (374)
T cd05106          37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP  116 (374)
T ss_pred             HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence            357999999999999999998732      24579999997543 22345688999999999 89999999999999999


Q ss_pred             eeEEeecCCCCChhhhhhccCC----------------------------------------------------------
Q 003786          546 KILIYEYMPNKSLDFFLFDSTK----------------------------------------------------------  567 (795)
Q Consensus       546 ~~lv~E~~~~gsL~~~l~~~~~----------------------------------------------------------  567 (795)
                      .++||||+++|+|.+++.....                                                          
T Consensus       117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (374)
T cd05106         117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD  196 (374)
T ss_pred             eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence            9999999999999988853211                                                          


Q ss_pred             ---------cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcccccccc
Q 003786          568 ---------ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKR  638 (795)
Q Consensus       568 ---------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~~~~  638 (795)
                               ...+++..+.+++.||+.||.|||+.+   |+||||||+|||+++++.+||+|||+++.............
T Consensus       197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~  273 (374)
T cd05106         197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN---CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGN  273 (374)
T ss_pred             ccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---EEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccC
Confidence                     123677888999999999999999988   99999999999999999999999999986543221112222


Q ss_pred             cccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhhHH
Q 003786          639 IVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYL  717 (795)
Q Consensus       639 ~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~  717 (795)
                      ..+++.|||||++.+..++.++|||||||++|||++ |+.||........ ....    .....         ....+..
T Consensus       274 ~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~-~~~~----~~~~~---------~~~~~~~  339 (374)
T cd05106         274 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSK-FYKM----VKRGY---------QMSRPDF  339 (374)
T ss_pred             CCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHH-HHHH----HHccc---------CccCCCC
Confidence            345678999999998999999999999999999997 9999865432211 1110    01100         0001111


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          718 ILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       718 ~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      .+..+.+++.+||+.+|++||++.+|+++|+.
T Consensus       340 ~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~  371 (374)
T cd05106         340 APPEIYSIMKMCWNLEPTERPTFSQISQLIQR  371 (374)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            23567889999999999999999999999976

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=4.9e-38  Score=324.16  Aligned_cols=257  Identities=21%  Similarity=0.237  Sum_probs=209.7

Q ss_pred             HccCCccccccCcCCcccEEEeEecC-cceEEEEEecccCcc---chHHHHHHHHHHHhcCCcccceeeeeeeecceeeE
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQ---GQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKIL  548 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  548 (795)
                      ...+|++.+.||.|.-|+||++++.. +..+|+|++.+....   ...+.+.|.+||+.++||.++.||..|+.+...++
T Consensus        75 ~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl  154 (459)
T KOG0610|consen   75 GLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCL  154 (459)
T ss_pred             CHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEE
Confidence            34678999999999999999999764 688999999876433   34566789999999999999999999999999999


Q ss_pred             EeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccC
Q 003786          549 IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      |||||+||+|..+++. +..+.+++..+..++.+|+.||+|||..|   ||+|||||+||||.++|+|-|+||.|+....
T Consensus       155 ~meyCpGGdL~~Lrqk-Qp~~~fse~~aRFYaAEvl~ALEYLHmlG---ivYRDLKPENILvredGHIMLsDFDLS~~~~  230 (459)
T KOG0610|consen  155 VMEYCPGGDLHSLRQK-QPGKRFSESAARFYAAEVLLALEYLHMLG---IVYRDLKPENILVREDGHIMLSDFDLSLRCP  230 (459)
T ss_pred             EEecCCCccHHHHHhh-CCCCccchhhHHHHHHHHHHHHHHHHhhc---eeeccCCcceeEEecCCcEEeeeccccccCC
Confidence            9999999999887744 45577999999999999999999999998   9999999999999999999999999975321


Q ss_pred             C---------------------------------C-c--------------------ccccccccccccccccccccccC
Q 003786          629 G---------------------------------D-E--------------------LQSKTKRIVGTYGYMSPEYAQQG  654 (795)
Q Consensus       629 ~---------------------------------~-~--------------------~~~~~~~~~gt~~y~APE~~~~~  654 (795)
                      .                                 . .                    .......++||-+|+|||++++.
T Consensus       231 ~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~  310 (459)
T KOG0610|consen  231 VSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGE  310 (459)
T ss_pred             CCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecC
Confidence            0                                 0 0                    00123356899999999999999


Q ss_pred             CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCC
Q 003786          655 LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDA  734 (795)
Q Consensus       655 ~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP  734 (795)
                      ..+.++|+|+|||++|||+.|..||-+.+......-              ++-..+.-...+.....+.+||.+.|..||
T Consensus       311 GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~N--------------Iv~~~l~Fp~~~~vs~~akDLIr~LLvKdP  376 (459)
T KOG0610|consen  311 GHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRN--------------IVGQPLKFPEEPEVSSAAKDLIRKLLVKDP  376 (459)
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHH--------------HhcCCCcCCCCCcchhHHHHHHHHHhccCh
Confidence            999999999999999999999999987664332111              000111111112455678899999999999


Q ss_pred             CCCCC----HHHHHHHH
Q 003786          735 ADRPT----MFEVVSML  747 (795)
Q Consensus       735 ~~RPt----~~evl~~L  747 (795)
                      ++|.-    +.||.+|-
T Consensus       377 ~kRlg~~rGA~eIK~Hp  393 (459)
T KOG0610|consen  377 SKRLGSKRGAAEIKRHP  393 (459)
T ss_pred             hhhhccccchHHhhcCc
Confidence            99998    99998874

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=8.4e-38  Score=313.51  Aligned_cols=273  Identities=23%  Similarity=0.295  Sum_probs=206.4

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCcc--chHHHHHHHHHHHhcCCcccceeeeeee--ecceeeE
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQ--GQEEFKNEIKLIAKLQHRNLVRLLGCCI--ELEEKIL  548 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~l  548 (795)
                      .++|+..++|++|.||.||+|+.+ +++.||+|+++.....  -.-.-.+|+.+|.+++|||||.+..+..  +-+..|+
T Consensus        75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~  154 (419)
T KOG0663|consen   75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI  154 (419)
T ss_pred             HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence            467999999999999999999865 5889999999764321  1234679999999999999999988765  4467999


Q ss_pred             EeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccC
Q 003786          549 IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      |||||++ +|..++....  ..+...++..+..|+++|++|||...   |+||||||+|+|+...|.+||+|||+|+.++
T Consensus       155 VMe~~Eh-DLksl~d~m~--q~F~~~evK~L~~QlL~glk~lH~~w---ilHRDLK~SNLLm~~~G~lKiaDFGLAR~yg  228 (419)
T KOG0663|consen  155 VMEYVEH-DLKSLMETMK--QPFLPGEVKTLMLQLLRGLKHLHDNW---ILHRDLKTSNLLLSHKGILKIADFGLAREYG  228 (419)
T ss_pred             eHHHHHh-hHHHHHHhcc--CCCchHHHHHHHHHHHHHHHHHhhce---eEecccchhheeeccCCcEEecccchhhhhc
Confidence            9999976 6777774333  45788999999999999999999987   9999999999999999999999999999887


Q ss_pred             CCccccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHh---------Hhhhcc
Q 003786          629 GDELQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGH---------AWDLWK  698 (795)
Q Consensus       629 ~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~---------~~~~~~  698 (795)
                      ...  ...+..+-|..|.|||++.+ ..|+.++|+||+|||+.||+++++-|++.++-++.....         .|..+.
T Consensus       229 sp~--k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~  306 (419)
T KOG0663|consen  229 SPL--KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYS  306 (419)
T ss_pred             CCc--ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCcc
Confidence            552  23455778999999998876 579999999999999999999999988776433311111         111111


Q ss_pred             CcccccccC--c----cccchhhHH-HHHHHHHHHHhhccCCCCCCCCHHHHHHHHccccCCC
Q 003786          699 DDRAWELID--P----TLQNEASYL-ILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINL  754 (795)
Q Consensus       699 ~~~~~~~id--~----~l~~~~~~~-~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~~~l  754 (795)
                      .......+.  +    .+...+... ..+.-.+++..+|..||.+|.|++|.|++=-....++
T Consensus       307 ~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~  369 (419)
T KOG0663|consen  307 ELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPL  369 (419)
T ss_pred             ccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCCC
Confidence            111111000  0    001111111 3355678999999999999999999999754433333

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.4e-39  Score=326.29  Aligned_cols=269  Identities=25%  Similarity=0.316  Sum_probs=207.8

Q ss_pred             HHccCCccccccCcCCcccEEEeEec-CcceEEEEEecc--cCccchHHHHHHHHHHHhcCCcccceeeeeeee-----c
Q 003786          472 AATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIE-----L  543 (795)
Q Consensus       472 ~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-----~  543 (795)
                      .....|...+.||+|+||.|..+... +|+.||||++..  +.....++..+|+++|+.++|+||+.+++.+..     -
T Consensus        19 ~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f   98 (359)
T KOG0660|consen   19 EIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKF   98 (359)
T ss_pred             eccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccc
Confidence            34456777899999999999999864 689999999973  344556788899999999999999999998865     4


Q ss_pred             ceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccc
Q 003786          544 EEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGM  623 (795)
Q Consensus       544 ~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGl  623 (795)
                      ...|+|+|+| ..+|...+.   .+..++...+..++.||++||.|+|+.+   |+||||||.|+|++.+..+||+|||+
T Consensus        99 ~DvYiV~elM-etDL~~iik---~~~~L~d~H~q~f~YQiLrgLKyiHSAn---ViHRDLKPsNll~n~~c~lKI~DFGL  171 (359)
T KOG0660|consen   99 NDVYLVFELM-ETDLHQIIK---SQQDLTDDHAQYFLYQILRGLKYIHSAN---VIHRDLKPSNLLLNADCDLKICDFGL  171 (359)
T ss_pred             ceeEEehhHH-hhHHHHHHH---cCccccHHHHHHHHHHHHHhcchhhccc---ccccccchhheeeccCCCEEeccccc
Confidence            5789999999 567888873   3444889999999999999999999998   99999999999999999999999999


Q ss_pred             ccccCCCcccccccccccccccccccccc-cCCCCcccchhhHHHHHHHHHhCCCCCCCCCC-cchhHhHhHhhhccCc-
Q 003786          624 ARIFGGDELQSKTKRIVGTYGYMSPEYAQ-QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNT-NSLTLLGHAWDLWKDD-  700 (795)
Q Consensus       624 a~~~~~~~~~~~~~~~~gt~~y~APE~~~-~~~~~~k~DvwSlGvil~elltG~~p~~~~~~-~~~~~~~~~~~~~~~~-  700 (795)
                      |+...........+..+.|..|.|||++. ...|+.+.||||.||||.||++|++-|++.+. .+..++...-....+. 
T Consensus       172 AR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~  251 (359)
T KOG0660|consen  172 ARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEED  251 (359)
T ss_pred             eeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHH
Confidence            99875432233345678899999999764 57899999999999999999999999988763 3333322211111111 


Q ss_pred             -------ccccccCc--ccc----chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          701 -------RAWELIDP--TLQ----NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       701 -------~~~~~id~--~l~----~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                             .....+..  ...    ...-+......++++.+||..||.+|+|++|.|+|-
T Consensus       252 l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hP  311 (359)
T KOG0660|consen  252 LQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHP  311 (359)
T ss_pred             HHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcCh
Confidence                   11111110  000    111123345678999999999999999999999974

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=9.7e-38  Score=332.95  Aligned_cols=265  Identities=20%  Similarity=0.279  Sum_probs=203.5

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      ++|++.+.||+|+||.||+++.. +++.||||++....  ....+.+.+|++++++++||||+++++++...+..++|||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE   80 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence            46899999999999999999875 57889999986542  2335678899999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      |++++.+..+..   ....+++..+..++.||+.||.|||+.+   |+||||||+||+++.++.+||+|||++.......
T Consensus        81 ~~~~~~l~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~  154 (287)
T cd07848          81 YVEKNMLELLEE---MPNGVPPEKVRSYIYQLIKAIHWCHKND---IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS  154 (287)
T ss_pred             cCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccCcccccccc
Confidence            999988876542   2345888999999999999999999988   9999999999999999999999999998754322


Q ss_pred             ccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhH-hHhH--------hhh-ccCcc
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTL-LGHA--------WDL-WKDDR  701 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~-~~~~--------~~~-~~~~~  701 (795)
                      . .......|++.|+|||++.+..++.++|||||||++|||++|+.||+......... ....        ... .....
T Consensus       155 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (287)
T cd07848         155 N-ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPR  233 (287)
T ss_pred             c-ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccch
Confidence            1 12233568999999999998889999999999999999999999997644222111 0000        000 00000


Q ss_pred             cccccCcccc------chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          702 AWELIDPTLQ------NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       702 ~~~~id~~l~------~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ......+...      .......+..+.+++.+||+.||++|||++|+++|
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h  284 (287)
T cd07848         234 FHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH  284 (287)
T ss_pred             hcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            0000001000      01111234568899999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.5e-38  Score=339.88  Aligned_cols=252  Identities=26%  Similarity=0.385  Sum_probs=215.2

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEeccc--CccchHHHHHHHHHHHhcCCcccceeeeeeeecce-eeEE
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQ--SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEE-KILI  549 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~lv  549 (795)
                      .++|..++++|+|+||.++.++++ +++.+++|++...  .....+...+|+.++++++|||||.+++.|.+++. .++|
T Consensus         3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv   82 (426)
T KOG0589|consen    3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV   82 (426)
T ss_pred             cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence            367899999999999999999875 4778999988654  33334568899999999999999999999999988 9999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      |+||+||+|.+.|.... ...++++.+..++.||+.|+.|||++.   |+|||||+.||+++.++.|||+|||+|+..+.
T Consensus        83 m~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH~~~---iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~  158 (426)
T KOG0589|consen   83 MEYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLHENR---VLHRDLKCANIFLTKDKKVKLGDFGLAKILNP  158 (426)
T ss_pred             EeecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhhh---hhcccchhhhhhccccCceeecchhhhhhcCC
Confidence            99999999999996544 567899999999999999999999776   99999999999999999999999999999876


Q ss_pred             CcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcc
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT  709 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~  709 (795)
                      ..  ....+..||+.||.||++.+.+|..|+|||||||++|||++-+++|...+......-               +.+.
T Consensus       159 ~~--~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~k---------------i~~~  221 (426)
T KOG0589|consen  159 ED--SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILK---------------INRG  221 (426)
T ss_pred             ch--hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHH---------------Hhhc
Confidence            54  234568999999999999999999999999999999999999999876543322111               1112


Q ss_pred             ccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          710 LQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       710 l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .....+.....++..++..||+.+|+.||++.++|.+
T Consensus       222 ~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  222 LYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             cCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence            2344566677888999999999999999999999986

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=4.4e-38  Score=342.49  Aligned_cols=247  Identities=22%  Similarity=0.260  Sum_probs=202.1

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      ..+|++.+.||+|+||.||+|+.. +++.||||++.+..   ....+.+.+|+.+|++++||||+++++++.+.+..++|
T Consensus        17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv   96 (329)
T PTZ00263         17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFL   96 (329)
T ss_pred             chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEE
Confidence            367999999999999999999875 58899999986532   23346788999999999999999999999999999999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      |||+++++|.+++..   ...+++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++....
T Consensus        97 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~  170 (329)
T PTZ00263         97 LEFVVGGELFTHLRK---AGRFPNDVAKFYHAELVLAFEYLHSKD---IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD  170 (329)
T ss_pred             EcCCCCChHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEECCCCCEEEeeccCceEcCC
Confidence            999999999988853   345788899999999999999999988   99999999999999999999999999986543


Q ss_pred             CcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcc
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT  709 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~  709 (795)
                      .     .....||+.|+|||++.+..++.++|||||||++|||++|+.||.......  ...    .......       
T Consensus       171 ~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~--~~~----~i~~~~~-------  232 (329)
T PTZ00263        171 R-----TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFR--IYE----KILAGRL-------  232 (329)
T ss_pred             C-----cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHH--HHH----HHhcCCc-------
Confidence            2     223579999999999999999999999999999999999999986433211  111    1111110       


Q ss_pred             ccchhhHHHHHHHHHHHHhhccCCCCCCCC-----HHHHHHHH
Q 003786          710 LQNEASYLILNRYINVGLLCVQEDAADRPT-----MFEVVSML  747 (795)
Q Consensus       710 l~~~~~~~~~~~l~~li~~cL~~dP~~RPt-----~~evl~~L  747 (795)
                         ..+.....++.+++.+||+.||++||+     ++++++|-
T Consensus       233 ---~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp  272 (329)
T PTZ00263        233 ---KFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHP  272 (329)
T ss_pred             ---CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCC
Confidence               011112346778999999999999997     78888763

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=5.6e-38  Score=340.82  Aligned_cols=242  Identities=23%  Similarity=0.275  Sum_probs=196.3

Q ss_pred             cccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCCCC
Q 003786          481 NKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNK  556 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g  556 (795)
                      +.||+|+||.||+++.. +++.||||++.+..   ......+.+|+.++++++||||+++++++...+..++||||++++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            46999999999999864 58899999997542   223456778999999999999999999999999999999999999


Q ss_pred             ChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcccccc
Q 003786          557 SLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKT  636 (795)
Q Consensus       557 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~~  636 (795)
                      +|..++..   ...+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++......  ...
T Consensus        81 ~L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~--~~~  152 (323)
T cd05571          81 ELFFHLSR---ERVFSEDRARFYGAEIVSALGYLHSCD---VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG--ATM  152 (323)
T ss_pred             cHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC--Ccc
Confidence            99888843   345889999999999999999999998   9999999999999999999999999987532211  123


Q ss_pred             cccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhhH
Q 003786          637 KRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASY  716 (795)
Q Consensus       637 ~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~  716 (795)
                      ....||+.|+|||++.+..++.++|||||||++|||++|+.||...+....  ....   .. ..      .    ..+.
T Consensus       153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~--~~~~---~~-~~------~----~~p~  216 (323)
T cd05571         153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL--FELI---LM-EE------I----RFPR  216 (323)
T ss_pred             cceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHH--HHHH---Hc-CC------C----CCCC
Confidence            346799999999999999999999999999999999999999864332111  1100   00 00      0    1112


Q ss_pred             HHHHHHHHHHHhhccCCCCCCC-----CHHHHHHH
Q 003786          717 LILNRYINVGLLCVQEDAADRP-----TMFEVVSM  746 (795)
Q Consensus       717 ~~~~~l~~li~~cL~~dP~~RP-----t~~evl~~  746 (795)
                      .....+.+++.+||+.||++||     ++.+++++
T Consensus       217 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h  251 (323)
T cd05571         217 TLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH  251 (323)
T ss_pred             CCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence            2345678899999999999999     89999876

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=1.2e-37  Score=331.50  Aligned_cols=257  Identities=30%  Similarity=0.464  Sum_probs=206.6

Q ss_pred             cCCccccccCcCCcccEEEeEecC------cceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceee
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLN------GQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKI  547 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  547 (795)
                      ++|++.+.||+|+||.||+|+...      .+.||+|.+.... ......+.+|++++++++||||+++++++......+
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC   84 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence            578899999999999999998543      2579999986443 233467899999999999999999999999999999


Q ss_pred             EEeecCCCCChhhhhhccCC-------------cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCC
Q 003786          548 LIYEYMPNKSLDFFLFDSTK-------------ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDM  614 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~  614 (795)
                      ++|||+++++|.+++.....             ...+++..+..++.|++.||.|||+.+   ++||||||+||++++++
T Consensus        85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nil~~~~~  161 (283)
T cd05048          85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH---FVHRDLAARNCLVGEGL  161 (283)
T ss_pred             EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccccceEEEcCCC
Confidence            99999999999998854321             145788889999999999999999988   99999999999999999


Q ss_pred             CeeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhH
Q 003786          615 NPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHA  693 (795)
Q Consensus       615 ~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~  693 (795)
                      .+||+|||+++...............+++.|+|||.+.+..++.++|||||||++|||++ |..||........  ..  
T Consensus       162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~--~~--  237 (283)
T cd05048         162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEV--IE--  237 (283)
T ss_pred             cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHH--HH--
Confidence            999999999986543332223334567889999999988899999999999999999998 9888864332211  11  


Q ss_pred             hhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          694 WDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       694 ~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                        ......         ....+...+.++.+++.+||+.+|.+||+++||+++|+.
T Consensus       238 --~i~~~~---------~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         238 --MIRSRQ---------LLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS  282 (283)
T ss_pred             --HHHcCC---------cCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence              111111         111233455788899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=2.4e-37  Score=332.72  Aligned_cols=266  Identities=24%  Similarity=0.273  Sum_probs=198.7

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCc-cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      .++|++.++||+|+||.||+|+.. +++.||||++..... .....+.+|+.++++++||||+++++++.+.+..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   83 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE   83 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence            468999999999999999999875 588999999875432 234567889999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      |+++ +|.+++..  ....+++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||++.......
T Consensus        84 ~~~~-~l~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~  157 (303)
T cd07869          84 YVHT-DLCQYMDK--HPGGLHPENVKLFLFQLLRGLSYIHQRY---ILHRDLKPQNLLISDTGELKLADFGLARAKSVPS  157 (303)
T ss_pred             CCCc-CHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECCCCcceeccCCC
Confidence            9974 56555533  2345788899999999999999999998   9999999999999999999999999987543221


Q ss_pred             cccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhh--hccCccc------
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWD--LWKDDRA------  702 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~--~~~~~~~------  702 (795)
                        .......+++.|+|||++.+ ..++.++|||||||++|||++|..||.........+......  .......      
T Consensus       158 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (303)
T cd07869         158 --HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSL  235 (303)
T ss_pred             --ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhc
Confidence              12233568999999998865 568999999999999999999999997543222111111000  0000000      


Q ss_pred             -------ccccCc-cccchh-hHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          703 -------WELIDP-TLQNEA-SYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       703 -------~~~id~-~l~~~~-~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                             .....+ .+.... .......+.+++.+||+.||++|||+.|++++-
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~  289 (303)
T cd07869         236 PHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHE  289 (303)
T ss_pred             cccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCc
Confidence                   000000 000000 001124577899999999999999999999853

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=1.6e-37  Score=331.66  Aligned_cols=265  Identities=22%  Similarity=0.300  Sum_probs=200.5

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      .++|++.++||+|+||.||+|+.. +++.||+|++.... ......+.+|++++++++||||+++++++...+..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   83 (288)
T cd07871           4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFE   83 (288)
T ss_pred             cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEe
Confidence            367999999999999999999865 58899999986543 2334578899999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      |+++ +|..++...  ...+++..+..++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+++......
T Consensus        84 ~~~~-~l~~~l~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~  157 (288)
T cd07871          84 YLDS-DLKQYLDNC--GNLMSMHNVKIFMFQLLRGLSYCHKRK---ILHRDLKPQNLLINEKGELKLADFGLARAKSVPT  157 (288)
T ss_pred             CCCc-CHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEECcCcceeeccCCC
Confidence            9985 787777432  234788899999999999999999988   9999999999999999999999999997643222


Q ss_pred             cccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhH-hHhHh-----hhccC----c
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTL-LGHAW-----DLWKD----D  700 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~-~~~~~-----~~~~~----~  700 (795)
                        .......+++.|+|||++.+ ..++.++|||||||++|||++|+.||.......... .....     ..+..    .
T Consensus       158 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (288)
T cd07871         158 --KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNE  235 (288)
T ss_pred             --ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccch
Confidence              12233568999999998865 568999999999999999999999987654222111 10000     00000    0


Q ss_pred             ccccccCccccch----hhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          701 RAWELIDPTLQNE----ASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       701 ~~~~~id~~l~~~----~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .......+.....    ........+.+++.+||+.||.+|||++|+++|
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h  285 (288)
T cd07871         236 EFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH  285 (288)
T ss_pred             hhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence            0001111111000    011223567899999999999999999999874

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-38  Score=335.03  Aligned_cols=246  Identities=29%  Similarity=0.424  Sum_probs=203.1

Q ss_pred             ccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCCCCC
Q 003786          478 STENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKS  557 (795)
Q Consensus       478 ~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gs  557 (795)
                      ...+-||.|+.|.||+|++ .++.||||+++..       -..+++=|++|+||||+.+.|+|...--+++|||||+.|-
T Consensus       127 sELeWlGSGaQGAVF~Grl-~netVAVKKV~el-------kETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~Gq  198 (904)
T KOG4721|consen  127 SELEWLGSGAQGAVFLGRL-HNETVAVKKVREL-------KETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQ  198 (904)
T ss_pred             hhhhhhccCcccceeeeec-cCceehhHHHhhh-------hhhhHHHHHhccCcceeeEeeeecCCceeEEeeecccccc
Confidence            3456799999999999998 5789999988532       2347788999999999999999999999999999999999


Q ss_pred             hhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccccccc
Q 003786          558 LDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTK  637 (795)
Q Consensus       558 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~~~  637 (795)
                      |..+|.   ....+.......+..+||.|+.|||.+.   |||||||.-||||..+..|||+|||.++.....   ...-
T Consensus       199 L~~VLk---a~~~itp~llv~Wsk~IA~GM~YLH~hK---IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~---STkM  269 (904)
T KOG4721|consen  199 LYEVLK---AGRPITPSLLVDWSKGIAGGMNYLHLHK---IIHRDLKSPNILISYDDVVKISDFGTSKELSDK---STKM  269 (904)
T ss_pred             HHHHHh---ccCccCHHHHHHHHHHhhhhhHHHHHhh---HhhhccCCCceEeeccceEEeccccchHhhhhh---hhhh
Confidence            999994   4456788899999999999999999987   999999999999999999999999999976543   2334


Q ss_pred             ccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhhHH
Q 003786          638 RIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYL  717 (795)
Q Consensus       638 ~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~  717 (795)
                      .+.||..|||||+++..+.+.|+|||||||+|||||||..|+..-+...              .+|..-...+.-..+..
T Consensus       270 SFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssA--------------IIwGVGsNsL~LpvPst  335 (904)
T KOG4721|consen  270 SFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSA--------------IIWGVGSNSLHLPVPST  335 (904)
T ss_pred             hhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhe--------------eEEeccCCcccccCccc
Confidence            5899999999999999999999999999999999999998874322111              11222222233334455


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCHHHHHHHHccccCCC
Q 003786          718 ILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINL  754 (795)
Q Consensus       718 ~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~~~l  754 (795)
                      ++.-+.-|+.+||+..|..||++++|+.||.-....+
T Consensus       336 cP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~pel  372 (904)
T KOG4721|consen  336 CPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASPEL  372 (904)
T ss_pred             CchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCHHH
Confidence            6667777899999999999999999999997644443

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=2.1e-37  Score=328.94  Aligned_cols=257  Identities=28%  Similarity=0.441  Sum_probs=206.2

Q ss_pred             ccCCccccccCcCCcccEEEeEecC------cceEEEEEecccCcc-chHHHHHHHHHHHhcCCcccceeeeeeeeccee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLN------GQEVAVKRLSSQSGQ-GQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEK  546 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  546 (795)
                      .++|.+.+.||+|+||.||+|+..+      ++.||||++...... ..+.+.+|+++|++++||||+++++++......
T Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   83 (280)
T cd05049           4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP   83 (280)
T ss_pred             hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCe
Confidence            3568889999999999999997532      478999998765433 457899999999999999999999999999999


Q ss_pred             eEEeecCCCCChhhhhhccC-----------CcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCC
Q 003786          547 ILIYEYMPNKSLDFFLFDST-----------KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMN  615 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~-----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~  615 (795)
                      ++||||+++++|.+++....           ....+++..+..++.||+.||.|||+++   ++||||||+||+++.++.
T Consensus        84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~  160 (280)
T cd05049          84 IMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH---FVHRDLATRNCLVGYDLV  160 (280)
T ss_pred             EEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eeccccccceEEEcCCCe
Confidence            99999999999999986432           2345788899999999999999999988   999999999999999999


Q ss_pred             eeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHh
Q 003786          616 PKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAW  694 (795)
Q Consensus       616 vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~  694 (795)
                      +||+|||++................+++.|+|||++.+..++.++|||||||++|||++ |..|+........  .... 
T Consensus       161 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~--~~~~-  237 (280)
T cd05049         161 VKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEV--IECI-  237 (280)
T ss_pred             EEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHH--HHHH-
Confidence            99999999976533322222233456788999999999999999999999999999998 9988764432221  1111 


Q ss_pred             hhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHc
Q 003786          695 DLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT  748 (795)
Q Consensus       695 ~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~  748 (795)
                         ..+...         ..+...+..+.+++.+||+.+|++||++.||++.|+
T Consensus       238 ---~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~  279 (280)
T cd05049         238 ---TQGRLL---------QRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ  279 (280)
T ss_pred             ---HcCCcC---------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence               111110         111223456789999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=1.4e-37  Score=339.63  Aligned_cols=247  Identities=22%  Similarity=0.259  Sum_probs=201.5

Q ss_pred             HccCCccccccCcCCcccEEEeEecC--cceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceee
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLLN--GQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKI  547 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~~--~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  547 (795)
                      ..++|++.+.||+|+||.||+|+...  +..||+|++.+..   ....+.+.+|+.+++.++||||+++++++.+....+
T Consensus        28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~  107 (340)
T PTZ00426         28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLY  107 (340)
T ss_pred             ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEE
Confidence            34679999999999999999998543  3689999986532   233457889999999999999999999999999999


Q ss_pred             EEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccccc
Q 003786          548 LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF  627 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~  627 (795)
                      +||||+++|+|.+++..   ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++...
T Consensus       108 lv~Ey~~~g~L~~~i~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~ikL~DFG~a~~~  181 (340)
T PTZ00426        108 LVLEFVIGGEFFTFLRR---NKRFPNDVGCFYAAQIVLIFEYLQSLN---IVYRDLKPENLLLDKDGFIKMTDFGFAKVV  181 (340)
T ss_pred             EEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEecCCCCeec
Confidence            99999999999998843   345889999999999999999999998   999999999999999999999999999865


Q ss_pred             CCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccC
Q 003786          628 GGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID  707 (795)
Q Consensus       628 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id  707 (795)
                      ...     .....||+.|||||++.+..++.++|||||||++|||++|..||.......  ....   .. ....     
T Consensus       182 ~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~--~~~~---i~-~~~~-----  245 (340)
T PTZ00426        182 DTR-----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLL--IYQK---IL-EGII-----  245 (340)
T ss_pred             CCC-----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHH--HHHH---Hh-cCCC-----
Confidence            322     234679999999999998889999999999999999999999996533211  1111   10 1100     


Q ss_pred             ccccchhhHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHH
Q 003786          708 PTLQNEASYLILNRYINVGLLCVQEDAADRP-----TMFEVVSM  746 (795)
Q Consensus       708 ~~l~~~~~~~~~~~l~~li~~cL~~dP~~RP-----t~~evl~~  746 (795)
                           ..+......+.+++.+||+.+|++|+     ++++++++
T Consensus       246 -----~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h  284 (340)
T PTZ00426        246 -----YFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH  284 (340)
T ss_pred             -----CCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence                 01112234567899999999999995     89999987

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=8.1e-39  Score=307.50  Aligned_cols=252  Identities=24%  Similarity=0.317  Sum_probs=205.8

Q ss_pred             ccCCccccccCcCCcccEEEeEe-cCcceEEEEEecc--cCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          474 TANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      .+.|++.+.||+|.|+.||++.+ ++|+.+|+|++..  .+..+.+++.+|+.|-+.|+|||||+|.+...+....++|+
T Consensus        10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF   89 (355)
T KOG0033|consen   10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   89 (355)
T ss_pred             chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence            46789999999999999999864 5799999998853  23447789999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECC---CCCeeeecccccccc
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDK---DMNPKISDFGMARIF  627 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~---~~~vkL~DFGla~~~  627 (795)
                      |+|.|+.|-.-|-   .+..+++..+...+.||+.||.|+|..+   |||||+||+|+++..   .--+||+|||+|..+
T Consensus        90 e~m~G~dl~~eIV---~R~~ySEa~aSH~~rQiLeal~yCH~n~---IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l  163 (355)
T KOG0033|consen   90 DLVTGGELFEDIV---AREFYSEADASHCIQQILEALAYCHSNG---IVHRDLKPENLLLASKAKGAAVKLADFGLAIEV  163 (355)
T ss_pred             ecccchHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeeeeccCCCceeecccceEEEe
Confidence            9999999965552   3356888899999999999999999988   999999999999953   345999999999988


Q ss_pred             CCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccC
Q 003786          628 GGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID  707 (795)
Q Consensus       628 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id  707 (795)
                      +...   ..-...|||+|||||+++..+|+..+|||+.|||||-|+.|.+||-..+....  .+..    ..+..     
T Consensus       164 ~~g~---~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rl--ye~I----~~g~y-----  229 (355)
T KOG0033|consen  164 NDGE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL--YEQI----KAGAY-----  229 (355)
T ss_pred             CCcc---ccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHH--HHHH----hcccc-----
Confidence            7332   34457899999999999999999999999999999999999999865443322  1111    11100     


Q ss_pred             ccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          708 PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       708 ~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                       ...........++..+|+.+||..||.+|.|+.|.|.+
T Consensus       230 -d~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~H  267 (355)
T KOG0033|consen  230 -DYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKH  267 (355)
T ss_pred             -CCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCC
Confidence             11112233445577789999999999999999999875

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=100.00  E-value=3e-38  Score=305.07  Aligned_cols=266  Identities=24%  Similarity=0.243  Sum_probs=211.3

Q ss_pred             HHHHccCCccccccCcCCcccEEEeE-ecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecce---
Q 003786          470 VSAATANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEE---  545 (795)
Q Consensus       470 i~~~~~~~~~~~~LG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---  545 (795)
                      +....++|.+.+.||+|||+-||+++ ..+++.||+|++.-...++.+..++|++.-++++||||++++++...+..   
T Consensus        16 v~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~   95 (302)
T KOG2345|consen   16 VIINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGK   95 (302)
T ss_pred             EEEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCc
Confidence            34566889999999999999999998 45688999999876667788899999999999999999999998775544   


Q ss_pred             --eeEEeecCCCCChhhhhhccCC-cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccc
Q 003786          546 --KILIYEYMPNKSLDFFLFDSTK-ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFG  622 (795)
Q Consensus       546 --~~lv~E~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFG  622 (795)
                        .|++++|...|+|.+.+..... ...+++.++..++.+|++||++||+.. .++.||||||.|||+.+.+.++|.|||
T Consensus        96 ~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~G  174 (302)
T KOG2345|consen   96 HEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDLG  174 (302)
T ss_pred             eeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEecc
Confidence              8999999999999888865443 458999999999999999999999986 479999999999999999999999999


Q ss_pred             cccccCCCccc-------cccccccccccccccccccc---CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHh
Q 003786          623 MARIFGGDELQ-------SKTKRIVGTYGYMSPEYAQQ---GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGH  692 (795)
Q Consensus       623 la~~~~~~~~~-------~~~~~~~gt~~y~APE~~~~---~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~  692 (795)
                      .+....-....       .....-..|..|.|||.+.-   ...+.++|||||||+||+|+.|..||+..-.        
T Consensus       175 S~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~--------  246 (302)
T KOG2345|consen  175 SATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ--------  246 (302)
T ss_pred             CccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh--------
Confidence            98754211100       01112246889999998853   4678999999999999999999999974221        


Q ss_pred             HhhhccCccccc-ccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          693 AWDLWKDDRAWE-LIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       693 ~~~~~~~~~~~~-~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                           ..+.+.- ...+.+.-+...-.++.+.++|.+|||.||.+||++.+++..+..
T Consensus       247 -----~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~  299 (302)
T KOG2345|consen  247 -----QGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDD  299 (302)
T ss_pred             -----cCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHh
Confidence                 1111111 111122111122267789999999999999999999999998865

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=2.7e-37  Score=343.17  Aligned_cols=254  Identities=21%  Similarity=0.292  Sum_probs=197.2

Q ss_pred             CCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      .|++++.||+|+||.||+|+.. +++.||||++.+..   ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            5888999999999999999864 58899999996542   2234568899999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      |+++|+|.+++..   ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++..+....
T Consensus        82 ~~~gg~L~~~l~~---~~~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~  155 (381)
T cd05626          82 YIPGGDMMSLLIR---MEVFPEVLARFYIAELTLAIESVHKMG---FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTH  155 (381)
T ss_pred             cCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCcHHHEEECCCCCEEEeeCcCCccccccc
Confidence            9999999998843   345888899999999999999999988   9999999999999999999999999976431100


Q ss_pred             c---------------------------------------------cccccccccccccccccccccCCCCcccchhhHH
Q 003786          632 L---------------------------------------------QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFG  666 (795)
Q Consensus       632 ~---------------------------------------------~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlG  666 (795)
                      .                                             ........||+.|+|||++.+..++.++||||||
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG  235 (381)
T cd05626         156 NSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVG  235 (381)
T ss_pred             ccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehh
Confidence            0                                             0011235799999999999988999999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHh--hccCCCCCCCCHHHHH
Q 003786          667 VLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLL--CVQEDAADRPTMFEVV  744 (795)
Q Consensus       667 vil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~--cL~~dP~~RPt~~evl  744 (795)
                      |++|||++|..||..............   +. .. ..       ..........+.+++.+  |+..+|..||++.|++
T Consensus       236 ~il~elltG~~Pf~~~~~~~~~~~i~~---~~-~~-~~-------~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l  303 (381)
T cd05626         236 VILFEMLVGQPPFLAPTPTETQLKVIN---WE-NT-LH-------IPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIK  303 (381)
T ss_pred             hHHHHHHhCCCCCcCCCHHHHHHHHHc---cc-cc-cC-------CCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHh
Confidence            999999999999975442221111000   00 00 00       00011123456677777  4556666799999999


Q ss_pred             HHH
Q 003786          745 SML  747 (795)
Q Consensus       745 ~~L  747 (795)
                      ++-
T Consensus       304 ~hp  306 (381)
T cd05626         304 AHP  306 (381)
T ss_pred             cCc
Confidence            973

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=2.1e-37  Score=326.69  Aligned_cols=254  Identities=27%  Similarity=0.391  Sum_probs=202.4

Q ss_pred             cCCccccccCcCCcccEEEeEec----CcceEEEEEecccCc-cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL----NGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      .+|++.+.||+|+||.||+|++.    .+..||+|.+..... ...+.+.+|+.++++++||||+++++++...+..++|
T Consensus         5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   84 (266)
T cd05064           5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV   84 (266)
T ss_pred             HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence            56889999999999999999753    356899999876432 3345788999999999999999999999999999999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      |||+++++|++++...  ...+++..+..++.||+.||+|||+.+   ++||||||+||+++.++.+||+|||.+.....
T Consensus        85 ~e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~~i~~al~~lH~~~---iiH~dikp~nili~~~~~~~l~dfg~~~~~~~  159 (266)
T cd05064          85 TEYMSNGALDSFLRKH--EGQLVAGQLMGMLPGLASGMKYLSEMG---YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKS  159 (266)
T ss_pred             EEeCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeeccccHhhEEEcCCCcEEECCCcccccccc
Confidence            9999999999998543  245889999999999999999999988   99999999999999999999999998765422


Q ss_pred             CcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCc
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP  708 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~  708 (795)
                      ... .......++..|+|||.+.+..++.++|||||||++|||++ |..||.......  .....    ....       
T Consensus       160 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~--~~~~~----~~~~-------  225 (266)
T cd05064         160 EAI-YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD--VIKAV----EDGF-------  225 (266)
T ss_pred             cch-hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH--HHHHH----HCCC-------
Confidence            211 11112345678999999999999999999999999999775 998886443221  11111    1110       


Q ss_pred             cccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          709 TLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       709 ~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                        ....+...+..+.+++..||+.+|++||++++|++.|+.
T Consensus       226 --~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~  264 (266)
T cd05064         226 --RLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSK  264 (266)
T ss_pred             --CCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHh
Confidence              011122345577889999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=2.3e-37  Score=343.93  Aligned_cols=260  Identities=25%  Similarity=0.349  Sum_probs=204.4

Q ss_pred             ccCCccccccCcCCcccEEEeEec------CcceEEEEEecccCc-cchHHHHHHHHHHHhcC-Ccccceeeeeeeecce
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL------NGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQ-HRNLVRLLGCCIELEE  545 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~  545 (795)
                      .++|+++++||+|+||.||+|+..      .+..||||++..... ...+.+.+|+++|+++. ||||+++++++.+...
T Consensus        36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~  115 (400)
T cd05105          36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP  115 (400)
T ss_pred             ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence            468999999999999999999752      134699999965432 23467899999999996 9999999999999999


Q ss_pred             eeEEeecCCCCChhhhhhccCC----------------------------------------------------------
Q 003786          546 KILIYEYMPNKSLDFFLFDSTK----------------------------------------------------------  567 (795)
Q Consensus       546 ~~lv~E~~~~gsL~~~l~~~~~----------------------------------------------------------  567 (795)
                      .++||||+++|+|.+++.....                                                          
T Consensus       116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (400)
T cd05105         116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK  195 (400)
T ss_pred             eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence            9999999999999988854211                                                          


Q ss_pred             -----------------------------------cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECC
Q 003786          568 -----------------------------------ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDK  612 (795)
Q Consensus       568 -----------------------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~  612 (795)
                                                         ...+++..+..++.||++||.|||+.+   |+||||||+|||++.
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dikp~Nill~~  272 (400)
T cd05105         196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN---CVHRDLAARNVLLAQ  272 (400)
T ss_pred             hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHhEEEeC
Confidence                                               123677788899999999999999988   999999999999999


Q ss_pred             CCCeeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhH
Q 003786          613 DMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLG  691 (795)
Q Consensus       613 ~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~  691 (795)
                      ++.+||+|||+++...............+++.|+|||.+.+..++.++|||||||++|||++ |..|++........ ..
T Consensus       273 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~-~~  351 (400)
T cd05105         273 GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTF-YN  351 (400)
T ss_pred             CCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHH-HH
Confidence            99999999999986543322222233456788999999998899999999999999999997 88888653322111 10


Q ss_pred             hHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          692 HAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       692 ~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                          ......         ....+...+..+.+++.+||+.+|++||++.+|+++|+..
T Consensus       352 ----~~~~~~---------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l  397 (400)
T cd05105         352 ----KIKSGY---------RMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESL  397 (400)
T ss_pred             ----HHhcCC---------CCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHH
Confidence                001110         0011123345788999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=4.3e-38  Score=321.64  Aligned_cols=262  Identities=23%  Similarity=0.300  Sum_probs=197.5

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecce-----eeE
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEE-----KIL  548 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-----~~l  548 (795)
                      -.|+..+.+|.|+||.||+|+.. ++++||||+.-..    .+.-.+|+++|+++.|||||+|..+|.....     ..+
T Consensus        24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d----~r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnl   99 (364)
T KOG0658|consen   24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQD----KRYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNL   99 (364)
T ss_pred             EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCC----CCcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHH
Confidence            34677899999999999999864 4789999988543    2344579999999999999999998875432     348


Q ss_pred             EeecCCCCChhhhhhc-cCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCC-CCeeeeccccccc
Q 003786          549 IYEYMPNKSLDFFLFD-STKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKD-MNPKISDFGMARI  626 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~-~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~-~~vkL~DFGla~~  626 (795)
                      ||||||. +|.+.+.. ...+..++...+.-+..||++||+|||+.+   |+||||||.|+|+|.+ |.+||||||.|+.
T Consensus       100 VleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~---IcHRDIKPqNlLvD~~tg~LKicDFGSAK~  175 (364)
T KOG0658|consen  100 VLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG---ICHRDIKPQNLLVDPDTGVLKICDFGSAKV  175 (364)
T ss_pred             HHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC---cccCCCChheEEEcCCCCeEEeccCCccee
Confidence            9999987 56566643 223455788889999999999999999988   9999999999999976 9999999999998


Q ss_pred             cCCCccccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchh-HhHhHhhhccCcccc-
Q 003786          627 FGGDELQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLT-LLGHAWDLWKDDRAW-  703 (795)
Q Consensus       627 ~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~-~~~~~~~~~~~~~~~-  703 (795)
                      +...+..   ....-|..|.|||.+.+ ..|+.+.||||.||++.||+-|++-|++.+..++. .+...-.....+.+. 
T Consensus       176 L~~~epn---iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~  252 (364)
T KOG0658|consen  176 LVKGEPN---ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKS  252 (364)
T ss_pred             eccCCCc---eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhh
Confidence            7655432   33456889999998876 58999999999999999999999999886643332 111111111111110 


Q ss_pred             ------cccCcccc-----chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          704 ------ELIDPTLQ-----NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       704 ------~~id~~l~-----~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                            +.-.+.+.     .-.......+.++++.++|+.+|.+|.++.|++.+-
T Consensus       253 mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~  307 (364)
T KOG0658|consen  253 MNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHP  307 (364)
T ss_pred             cCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcch
Confidence                  11111111     112334556788999999999999999999999873

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=4.4e-37  Score=322.20  Aligned_cols=252  Identities=30%  Similarity=0.431  Sum_probs=202.7

Q ss_pred             cCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCC
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMP  554 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~  554 (795)
                      .+|++.+.||+|+||.||+++..++..+|+|.+... ....+.+.+|+++|++++||||+++++++.+.+..++||||++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~   82 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME   82 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEeccCceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence            468889999999999999999888889999988643 3345678999999999999999999999999999999999999


Q ss_pred             CCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcccc
Q 003786          555 NKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQS  634 (795)
Q Consensus       555 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~  634 (795)
                      +++|.+++....  ..+++..+..++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||+++........ 
T Consensus        83 ~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~-  156 (256)
T cd05114          83 NGCLLNYLRQRQ--GKLSKDMLLSMCQDVCEGMEYLERNS---FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT-  156 (256)
T ss_pred             CCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcceEEEcCCCeEEECCCCCccccCCCcee-
Confidence            999999885432  35788999999999999999999988   999999999999999999999999999865332221 


Q ss_pred             cccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCccccch
Q 003786          635 KTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNE  713 (795)
Q Consensus       635 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~  713 (795)
                      ......++..|+|||.+....++.++||||||+++|||++ |+.|+.......  .......   ..+   ...+     
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~--~~~~i~~---~~~---~~~~-----  223 (256)
T cd05114         157 SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYE--VVEMISR---GFR---LYRP-----  223 (256)
T ss_pred             ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHHHC---CCC---CCCC-----
Confidence            1122345678999999988889999999999999999999 888886443211  1111111   101   0011     


Q ss_pred             hhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHc
Q 003786          714 ASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT  748 (795)
Q Consensus       714 ~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~  748 (795)
                        ......+.+++.+||+.+|++||++.++++.|+
T Consensus       224 --~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~  256 (256)
T cd05114         224 --KLASMTVYEVMYSCWHEKPEGRPTFAELLRAIT  256 (256)
T ss_pred             --CCCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence              112346789999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=4.9e-37  Score=322.79  Aligned_cols=255  Identities=29%  Similarity=0.408  Sum_probs=205.5

Q ss_pred             ccCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecC
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYM  553 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  553 (795)
                      .++|++.+.||+|++|.||+|...+++.||+|.+.... ...+++.+|++++++++||||+++++++...+..++||||+
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   83 (261)
T cd05068           5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELM   83 (261)
T ss_pred             hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecc
Confidence            45689999999999999999988778889999986543 34677999999999999999999999999999999999999


Q ss_pred             CCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccc
Q 003786          554 PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ  633 (795)
Q Consensus       554 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~  633 (795)
                      ++++|.+++.... ...+++..+..++.|++.||.|||+.+   |+||||||+||++++++.+||+|||++.........
T Consensus        84 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~  159 (261)
T cd05068          84 KYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEAQN---YIHRDLAARNVLVGENNICKVADFGLARVIKEDIYE  159 (261)
T ss_pred             cCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCcceEEEcCCCCEEECCcceEEEccCCccc
Confidence            9999999985433 345789999999999999999999988   999999999999999999999999999876532211


Q ss_pred             ccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCccccc
Q 003786          634 SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQN  712 (795)
Q Consensus       634 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~  712 (795)
                       .......+..|+|||++.+..++.++||||||+++|||++ |+.|+.......  .....    .....         .
T Consensus       160 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~~----~~~~~---------~  223 (261)
T cd05068         160 -AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE--VLQQV----DQGYR---------M  223 (261)
T ss_pred             -ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH--HHHHH----HcCCC---------C
Confidence             1111223468999999998899999999999999999999 888875432111  11111    00000         0


Q ss_pred             hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          713 EASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       713 ~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      ..+...+..+.+++.+|++.+|++||++.+|++.|+.
T Consensus       224 ~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~  260 (261)
T cd05068         224 PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED  260 (261)
T ss_pred             CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence            1112234578899999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-37  Score=349.50  Aligned_cols=258  Identities=24%  Similarity=0.332  Sum_probs=210.2

Q ss_pred             HHccCCccccccCcCCcccEEEeEecCc-ceEEEEEecccCccchHHHHHHHHHHHhcC-Ccccceeeeeee-e------
Q 003786          472 AATANFSTENKLGEGGFGPVYKGRLLNG-QEVAVKRLSSQSGQGQEEFKNEIKLIAKLQ-HRNLVRLLGCCI-E------  542 (795)
Q Consensus       472 ~~~~~~~~~~~LG~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~-~------  542 (795)
                      ....++++.+.|.+|||+.||+|+...+ .+||+|++...+....+.+++|+++|++|+ |+|||.+++... .      
T Consensus        34 Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~  113 (738)
T KOG1989|consen   34 VGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNG  113 (738)
T ss_pred             ECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCc
Confidence            3446788899999999999999998765 999999987777788899999999999997 999999999322 1      


Q ss_pred             cceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccc
Q 003786          543 LEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFG  622 (795)
Q Consensus       543 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFG  622 (795)
                      .-+.+|.||||.+|.|-+++......+ |.+.++++|+.++++|+++||... .+|||||||-|||||..++..||||||
T Consensus       114 ~~EvllLmEyC~gg~Lvd~mn~Rlq~~-lte~eVLkIf~dv~~AVa~mH~~~-pPiIHRDLKiENvLls~~g~~KLCDFG  191 (738)
T KOG1989|consen  114 VWEVLLLMEYCKGGSLVDFMNTRLQTR-LTEDEVLKIFYDVCEAVAAMHYLK-PPIIHRDLKIENVLLSADGNYKLCDFG  191 (738)
T ss_pred             eeEEEeehhhccCCcHHHHHHHHHhcc-CChHHHHHHHHHHHHHHHHHhcCC-CccchhhhhhhheEEcCCCCEEeCccc
Confidence            235679999999999999986554444 999999999999999999999985 789999999999999999999999999


Q ss_pred             cccccCCCcccc-------ccccccccccccccccc---ccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHh
Q 003786          623 MARIFGGDELQS-------KTKRIVGTYGYMSPEYA---QQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGH  692 (795)
Q Consensus       623 la~~~~~~~~~~-------~~~~~~gt~~y~APE~~---~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~  692 (795)
                      -+...-......       ..-...-|+.|.|||.+   .+.++++|+|||+|||+||-|+....||+....-.      
T Consensus       192 Satt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~la------  265 (738)
T KOG1989|consen  192 SATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLA------  265 (738)
T ss_pred             ccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCccee------
Confidence            987432211000       01122468999999976   67899999999999999999999999998543221      


Q ss_pred             HhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          693 AWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       693 ~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                                  +++..+.-...+....++.+||..||+.||++||++-+|+..+-.
T Consensus       266 ------------Ilng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~  310 (738)
T KOG1989|consen  266 ------------ILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFE  310 (738)
T ss_pred             ------------EEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHH
Confidence                        223333333335677899999999999999999999999987644

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=2.5e-37  Score=324.76  Aligned_cols=255  Identities=31%  Similarity=0.471  Sum_probs=210.1

Q ss_pred             ccCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecC
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYM  553 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  553 (795)
                      ..+|++.++||+|+||.||+|+..+++.+|+|++........+.+.+|+.+++.++||||+++++++.+.+..++||||+
T Consensus         5 ~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   84 (261)
T cd05148           5 REEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELM   84 (261)
T ss_pred             HHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeec
Confidence            45789999999999999999998888999999997766556778999999999999999999999999999999999999


Q ss_pred             CCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccc
Q 003786          554 PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ  633 (795)
Q Consensus       554 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~  633 (795)
                      ++++|.+++.... ...+++..+..++.||+.||.|||+.+   |+|+||||+||+++.++.+||+|||++.........
T Consensus        85 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~~---i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~  160 (261)
T cd05148          85 EKGSLLAFLRSPE-GQVLPVASLIDMACQVAEGMAYLEEQN---SIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYL  160 (261)
T ss_pred             ccCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccCcceEEEcCCceEEEccccchhhcCCcccc
Confidence            9999999996533 345788999999999999999999988   999999999999999999999999999866432211


Q ss_pred             ccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCccccc
Q 003786          634 SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQN  712 (795)
Q Consensus       634 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~  712 (795)
                        .....++..|+|||.+.+..++.++||||||+++|+|++ |+.|+........  .....    ..         ...
T Consensus       161 --~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~--~~~~~----~~---------~~~  223 (261)
T cd05148         161 --SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEV--YDQIT----AG---------YRM  223 (261)
T ss_pred             --ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHH--HHHHH----hC---------CcC
Confidence              123346778999999988899999999999999999998 7888865432111  11110    00         011


Q ss_pred             hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          713 EASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       713 ~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      ..+...+..+.+++.+||+.+|++|||+.++++.|+.
T Consensus       224 ~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~  260 (261)
T cd05148         224 PCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN  260 (261)
T ss_pred             CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence            1122334577899999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=2.4e-37  Score=336.44  Aligned_cols=242  Identities=23%  Similarity=0.271  Sum_probs=196.1

Q ss_pred             cccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCCCC
Q 003786          481 NKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNK  556 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g  556 (795)
                      +.||+|+||.||+++.. +++.||||++.+..   ......+.+|+++|+.++||||+++++++...+..++||||++++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            46999999999999864 58999999997542   233456788999999999999999999999999999999999999


Q ss_pred             ChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcccccc
Q 003786          557 SLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKT  636 (795)
Q Consensus       557 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~~  636 (795)
                      +|..++..   ...+++..+..++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+++......  ...
T Consensus        81 ~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~--~~~  152 (328)
T cd05593          81 ELFFHLSR---ERVFSEDRTRFYGAEIVSALDYLHSGK---IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA--ATM  152 (328)
T ss_pred             CHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeEECCCCcEEEecCcCCccCCCcc--ccc
Confidence            99888743   345889999999999999999999988   9999999999999999999999999987532211  122


Q ss_pred             cccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhhH
Q 003786          637 KRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASY  716 (795)
Q Consensus       637 ~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~  716 (795)
                      ....||+.|+|||++.+..++.++|||||||++|+|++|+.||........  ...   ... ..      .    ..+.
T Consensus       153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~--~~~---~~~-~~------~----~~p~  216 (328)
T cd05593         153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL--FEL---ILM-ED------I----KFPR  216 (328)
T ss_pred             ccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHH--HHH---hcc-CC------c----cCCC
Confidence            345799999999999999999999999999999999999999865332111  110   000 00      0    0111


Q ss_pred             HHHHHHHHHHHhhccCCCCCCC-----CHHHHHHH
Q 003786          717 LILNRYINVGLLCVQEDAADRP-----TMFEVVSM  746 (795)
Q Consensus       717 ~~~~~l~~li~~cL~~dP~~RP-----t~~evl~~  746 (795)
                      .....+.+++.+||+.||++||     ++.|++++
T Consensus       217 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h  251 (328)
T cd05593         217 TLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH  251 (328)
T ss_pred             CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence            2345678899999999999997     89999886

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=7.3e-37  Score=333.38  Aligned_cols=264  Identities=23%  Similarity=0.327  Sum_probs=202.9

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      .++|++.++||+|+||.||+++.. +++.+|+|++.... ....+.+.+|++++++++||||++++++|.+.+..++|||
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence            478999999999999999999875 57889999886542 2334678999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      |+++++|.+++..   .+.+++..+..++.|++.||.|||+.+  +|+||||||+|||++.++.+||+|||++...... 
T Consensus        84 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~-  157 (333)
T cd06650          84 HMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-  157 (333)
T ss_pred             cCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh-
Confidence            9999999999843   345788899999999999999999752  3999999999999999999999999998755322 


Q ss_pred             ccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHh-Hhh-hccCcc--------
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGH-AWD-LWKDDR--------  701 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~-~~~-~~~~~~--------  701 (795)
                         ......|+..|+|||++.+..++.++|||||||++|||++|+.|+............. ... ......        
T Consensus       158 ---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (333)
T cd06650         158 ---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPP  234 (333)
T ss_pred             ---ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCc
Confidence               1233568999999999998899999999999999999999999987544222111000 000 000000        


Q ss_pred             ----------------cccccCccccc---h-hhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          702 ----------------AWELIDPTLQN---E-ASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       702 ----------------~~~~id~~l~~---~-~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                                      ...+.+.....   . .......++.+++.+||+.||++|||+.|++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h  299 (333)
T cd06650         235 GRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVH  299 (333)
T ss_pred             cchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhC
Confidence                            00000000000   0 000123567899999999999999999999886

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=3.9e-37  Score=315.63  Aligned_cols=268  Identities=24%  Similarity=0.332  Sum_probs=204.5

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCc--cchHHHHHHHHHHHhcCCcc-cceeeeeeeecc-----
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG--QGQEEFKNEIKLIAKLQHRN-LVRLLGCCIELE-----  544 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~-----  544 (795)
                      ...|+..++||+|+||+||+|+.+ +|+.||+|+++-...  .......+|+.+|++|+|+| ||++++++...+     
T Consensus        10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~   89 (323)
T KOG0594|consen   10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI   89 (323)
T ss_pred             HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence            355777889999999999999854 689999999976543  24466789999999999999 999999999887     


Q ss_pred             -eeeEEeecCCCCChhhhhhccCCc-ccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccc
Q 003786          545 -EKILIYEYMPNKSLDFFLFDSTKE-NLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFG  622 (795)
Q Consensus       545 -~~~lv~E~~~~gsL~~~l~~~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFG  622 (795)
                       ..++|+||++. +|..++...... ..++...+..++.||++||+|||+++   |+||||||+||||++.|.+||+|||
T Consensus        90 ~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~---IlHRDLKPQNlLi~~~G~lKlaDFG  165 (323)
T KOG0594|consen   90 GKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG---ILHRDLKPQNLLISSSGVLKLADFG  165 (323)
T ss_pred             ceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCcceEEECCCCcEeeeccc
Confidence             78899999865 677777543322 34666889999999999999999998   9999999999999999999999999


Q ss_pred             cccccCCCcccccccccccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCc-
Q 003786          623 MARIFGGDELQSKTKRIVGTYGYMSPEYAQQG-LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDD-  700 (795)
Q Consensus       623 la~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~-  700 (795)
                      +|+.+.-..  .....-++|..|.|||++.+. .|+...||||+|||++||++++.-|++..+.++..  ........+ 
T Consensus       166 lAra~~ip~--~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~--~If~~lGtP~  241 (323)
T KOG0594|consen  166 LARAFSIPM--RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLF--RIFRLLGTPN  241 (323)
T ss_pred             hHHHhcCCc--ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHH--HHHHHcCCCC
Confidence            999765332  123446789999999988775 89999999999999999999998888766533321  111111111 


Q ss_pred             -cccc---------ccCcccc--chhhHHHH---HHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          701 -RAWE---------LIDPTLQ--NEASYLIL---NRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       701 -~~~~---------~id~~l~--~~~~~~~~---~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                       ..|.         ..-+...  ......++   ....+++.+||+.+|.+|.|++.+++|-..
T Consensus       242 e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf  305 (323)
T KOG0594|consen  242 EKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYF  305 (323)
T ss_pred             ccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhh
Confidence             1111         1001110  01111111   367899999999999999999999997443

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=3e-37  Score=330.06  Aligned_cols=260  Identities=27%  Similarity=0.436  Sum_probs=208.8

Q ss_pred             cCCccccccCcCCcccEEEeEec------CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeE
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL------NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKIL  548 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  548 (795)
                      .+|.+.+.||+|+||.||+|+..      ++..+++|.+........+.+.+|++++++++||||+++++++......++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM   84 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence            56888899999999999999742      355689999876555556789999999999999999999999999999999


Q ss_pred             EeecCCCCChhhhhhccC-------------CcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCC
Q 003786          549 IYEYMPNKSLDFFLFDST-------------KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMN  615 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~  615 (795)
                      ||||+++++|.+++....             ....+++..+..++.||+.||+|||+++   |+||||||+||+++.++.
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil~~~~~~  161 (291)
T cd05094          85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH---FVHRDLATRNCLVGANLL  161 (291)
T ss_pred             EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCc
Confidence            999999999999985432             1234788999999999999999999988   999999999999999999


Q ss_pred             eeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHh
Q 003786          616 PKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAW  694 (795)
Q Consensus       616 vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~  694 (795)
                      +||+|||++................++..|+|||.+.+..++.++|||||||++|||++ |..|+.......  ...   
T Consensus       162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--~~~---  236 (291)
T cd05094         162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE--VIE---  236 (291)
T ss_pred             EEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHH---
Confidence            99999999986543332222333456889999999998999999999999999999998 888875433221  111   


Q ss_pred             hhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccccC
Q 003786          695 DLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTI  752 (795)
Q Consensus       695 ~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~~  752 (795)
                       ........+         .....+..+.+++.+||+.+|++||++++|+++|+....
T Consensus       237 -~~~~~~~~~---------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~  284 (291)
T cd05094         237 -CITQGRVLE---------RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK  284 (291)
T ss_pred             -HHhCCCCCC---------CCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence             111111111         111234567899999999999999999999999988543

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=2.7e-37  Score=327.79  Aligned_cols=259  Identities=26%  Similarity=0.420  Sum_probs=202.3

Q ss_pred             HccCCccccccCcCCcccEEEeEec------CcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecce
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL------NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEE  545 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  545 (795)
                      ..++|++.+.||+|+||.||+|...      .+..||||++.... .....++.+|+.+++.++||||+++++++.+...
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~   83 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP   83 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            4577999999999999999998742      25679999986432 2234568899999999999999999999999999


Q ss_pred             eeEEeecCCCCChhhhhhccCC-------cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeee
Q 003786          546 KILIYEYMPNKSLDFFLFDSTK-------ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKI  618 (795)
Q Consensus       546 ~~lv~E~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL  618 (795)
                      .++||||+++++|.+++.....       ...+++..+..++.|+++||.|||+.+   ++||||||+||++++++.+||
T Consensus        84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~vH~dlkp~Nil~~~~~~~~l  160 (277)
T cd05062          84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKI  160 (277)
T ss_pred             eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCcchheEEEcCCCCEEE
Confidence            9999999999999998854321       123567788899999999999999987   999999999999999999999


Q ss_pred             eccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhc
Q 003786          619 SDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLW  697 (795)
Q Consensus       619 ~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~  697 (795)
                      +|||+++...............+++.|+|||++.+..++.++|||||||++|||++ |..|+.......  .....    
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~--~~~~~----  234 (277)
T cd05062         161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQ--VLRFV----  234 (277)
T ss_pred             CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHH----
Confidence            99999886543332222222345788999999998899999999999999999998 677775433211  11110    


Q ss_pred             cCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          698 KDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       698 ~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      .......         .+...+..+.+++.+||+.+|++||++.|++++|+.
T Consensus       235 ~~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~  277 (277)
T cd05062         235 MEGGLLD---------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE  277 (277)
T ss_pred             HcCCcCC---------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence            0111100         111234567899999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=3.5e-37  Score=351.53  Aligned_cols=254  Identities=18%  Similarity=0.211  Sum_probs=204.3

Q ss_pred             cCCccccccCcCCcccEEEeEec-C-cceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-N-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      ..|.+.+.||+|+||.||+|... + ++.||+|.+..........+++|+.+|+.++|||||++++++...+..++||||
T Consensus        67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~  146 (478)
T PTZ00267         67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEY  146 (478)
T ss_pred             eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEEC
Confidence            34899999999999999999754 3 677889877555444456788999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccC-CcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          553 MPNKSLDFFLFDST-KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       553 ~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      +++|+|.+++.... ....+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+++.+....
T Consensus       147 ~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~  223 (478)
T PTZ00267        147 GSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK---MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSV  223 (478)
T ss_pred             CCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCcCHHhEEECCCCcEEEEeCcCceecCCcc
Confidence            99999998875432 2345788899999999999999999988   9999999999999999999999999998765433


Q ss_pred             ccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcccc
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQ  711 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~  711 (795)
                      .........||+.|+|||++.+..++.++|||||||++|||++|+.||.......  .....   .. +..         
T Consensus       224 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~--~~~~~---~~-~~~---------  288 (478)
T PTZ00267        224 SLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQRE--IMQQV---LY-GKY---------  288 (478)
T ss_pred             ccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHH---Hh-CCC---------
Confidence            2223345679999999999999999999999999999999999999986533211  11110   00 000         


Q ss_pred             chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          712 NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       712 ~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ...+......+.+++.+||+.+|++||++.+++.+
T Consensus       289 ~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~  323 (478)
T PTZ00267        289 DPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHT  323 (478)
T ss_pred             CCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence            01112234567899999999999999999998753

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=7.3e-37  Score=336.28  Aligned_cols=249  Identities=25%  Similarity=0.354  Sum_probs=195.7

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCc-cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      ..+|+..++||+|+||.||+|+.. +++.||||++..... ...+.+.+|++++++++|+||+++++++.+.+..++|||
T Consensus        73 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  152 (353)
T PLN00034         73 LSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLE  152 (353)
T ss_pred             HHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEe
Confidence            356778899999999999999865 589999999865432 234678899999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      |+++++|....       ...+..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++......
T Consensus       153 ~~~~~~L~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~  222 (353)
T PLN00034        153 FMDGGSLEGTH-------IADEQFLADVARQILSGIAYLHRRH---IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM  222 (353)
T ss_pred             cCCCCcccccc-------cCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEcccccceeccccc
Confidence            99999985432       2456778899999999999999988   9999999999999999999999999998654321


Q ss_pred             cccccccccccccccccccccc-----CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCccccccc
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQ-----GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELI  706 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~-----~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i  706 (795)
                        .......||..|+|||.+..     ...+.++|||||||++|||++|+.||.................  ..      
T Consensus       223 --~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~--~~------  292 (353)
T PLN00034        223 --DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICM--SQ------  292 (353)
T ss_pred             --ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhc--cC------
Confidence              11234579999999998743     2345799999999999999999999974332222111111000  00      


Q ss_pred             CccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          707 DPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       707 d~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                          ...........+.+++.+||+.+|++||++.||+++
T Consensus       293 ----~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h  328 (353)
T PLN00034        293 ----PPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH  328 (353)
T ss_pred             ----CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                011122334578899999999999999999999986

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=2.9e-37  Score=335.17  Aligned_cols=242  Identities=23%  Similarity=0.270  Sum_probs=195.3

Q ss_pred             cccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCCCC
Q 003786          481 NKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNK  556 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g  556 (795)
                      +.||+|+||.||+++.. +++.||+|++....   ......+.+|++++++++||||+++++++...+..++||||++++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            46999999999999864 58999999997542   223456778999999999999999999999999999999999999


Q ss_pred             ChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcccccc
Q 003786          557 SLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKT  636 (795)
Q Consensus       557 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~~  636 (795)
                      +|..++..   ...+++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||++.......  ...
T Consensus        81 ~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~--~~~  152 (323)
T cd05595          81 ELFFHLSR---ERVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG--ATM  152 (323)
T ss_pred             cHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEEcCCCCEEecccHHhccccCCC--Ccc
Confidence            99888743   345889999999999999999999988   9999999999999999999999999987532221  122


Q ss_pred             cccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhhH
Q 003786          637 KRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASY  716 (795)
Q Consensus       637 ~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~  716 (795)
                      ....||+.|+|||++.+..++.++|||||||++|||++|+.||...+....  ....   .. ..      ..    .+.
T Consensus       153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~--~~~~---~~-~~------~~----~p~  216 (323)
T cd05595         153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL--FELI---LM-EE------IR----FPR  216 (323)
T ss_pred             ccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHH--HHHH---hc-CC------CC----CCC
Confidence            345799999999999999999999999999999999999999864432211  1100   00 00      00    111


Q ss_pred             HHHHHHHHHHHhhccCCCCCCC-----CHHHHHHH
Q 003786          717 LILNRYINVGLLCVQEDAADRP-----TMFEVVSM  746 (795)
Q Consensus       717 ~~~~~l~~li~~cL~~dP~~RP-----t~~evl~~  746 (795)
                      .....+.+++.+||+.+|++||     ++.+++++
T Consensus       217 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h  251 (323)
T cd05595         217 TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  251 (323)
T ss_pred             CCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence            2345677899999999999998     89999875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=4.4e-37  Score=323.09  Aligned_cols=255  Identities=30%  Similarity=0.433  Sum_probs=205.9

Q ss_pred             ccCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecC
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYM  553 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  553 (795)
                      .++|++.++||+|+||.||+|...+++.||+|.+.... ...+.+.+|+.++++++|+||+++++.+...+..+++|||+
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   83 (261)
T cd05072           5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM   83 (261)
T ss_pred             hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence            36789999999999999999998788899999986432 34578899999999999999999999999999999999999


Q ss_pred             CCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccc
Q 003786          554 PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ  633 (795)
Q Consensus       554 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~  633 (795)
                      ++++|.+++... ....+++..+..++.|+++||+|||+.+   ++||||||+||+++.++.+||+|||++.........
T Consensus        84 ~~~~L~~~l~~~-~~~~~~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~  159 (261)
T cd05072          84 AKGSLLDFLKSD-EGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT  159 (261)
T ss_pred             CCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEecCCCcEEECCCccceecCCCcee
Confidence            999999988543 2345778889999999999999999987   999999999999999999999999999876433211


Q ss_pred             ccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCccccc
Q 003786          634 SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQN  712 (795)
Q Consensus       634 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~  712 (795)
                       ......++..|+|||.+....++.++|||||||++|+|++ |..|+.......  .....    ......         
T Consensus       160 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~--~~~~~----~~~~~~---------  223 (261)
T cd05072         160 -AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD--VMSAL----QRGYRM---------  223 (261)
T ss_pred             -ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH--HHHHH----HcCCCC---------
Confidence             1222345778999999988889999999999999999998 888886433211  11111    111000         


Q ss_pred             hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          713 EASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       713 ~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      ......+..+.+++.+|++.+|++||++++++++|+.
T Consensus       224 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  260 (261)
T cd05072         224 PRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD  260 (261)
T ss_pred             CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            0111234567889999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=5.7e-37  Score=333.17  Aligned_cols=252  Identities=26%  Similarity=0.319  Sum_probs=213.8

Q ss_pred             HccCCccccccCcCCcccEEEeEecC-cceEEEEEecccCcc---chHHHHHHHHHHHhcC-Ccccceeeeeeeecceee
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQ---GQEEFKNEIKLIAKLQ-HRNLVRLLGCCIELEEKI  547 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~  547 (795)
                      ....|++.+.||+|.||.||+++.+. |+.+|+|.+.+....   ..+.+.+|+++|+++. |||||.+++.|.+....+
T Consensus        33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~  112 (382)
T KOG0032|consen   33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY  112 (382)
T ss_pred             ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence            34679999999999999999998765 999999999776443   3468999999999998 999999999999999999


Q ss_pred             EEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCC----CCeeeecccc
Q 003786          548 LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKD----MNPKISDFGM  623 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~----~~vkL~DFGl  623 (795)
                      +|||++.||.|.+.+...    .+++..+..++.||+.++.|||+.+   |+||||||+|+|+...    +.+|++|||+
T Consensus       113 lvmEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH~~g---vvHrDlKpEN~L~~~~~~~~~~ik~~DFGl  185 (382)
T KOG0032|consen  113 LVMELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYLHSLG---VVHRDLKPENLLLASKDEGSGRIKLIDFGL  185 (382)
T ss_pred             EEEEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHHhCC---ceeccCCHHHeeeccccCCCCcEEEeeCCC
Confidence            999999999999888655    2899999999999999999999988   9999999999999533    5799999999


Q ss_pred             ccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccc
Q 003786          624 ARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAW  703 (795)
Q Consensus       624 a~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~  703 (795)
                      +.....   .......+||+.|+|||++....|+..+||||+||++|.|++|.+||..............      .   
T Consensus       186 a~~~~~---~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~------~---  253 (382)
T KOG0032|consen  186 AKFIKP---GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILR------G---  253 (382)
T ss_pred             ceEccC---CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHc------C---
Confidence            998765   2345668999999999999999999999999999999999999999977654333221110      1   


Q ss_pred             cccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          704 ELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       704 ~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                         +..+..+........+.++|..||..||.+|+|+.++++|
T Consensus       254 ---~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H  293 (382)
T KOG0032|consen  254 ---DFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH  293 (382)
T ss_pred             ---CCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence               1122333445556778899999999999999999999996

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6e-38  Score=341.74  Aligned_cols=261  Identities=31%  Similarity=0.406  Sum_probs=206.8

Q ss_pred             ccCCccccccCcCCcccEEEeEecC--c--ce-EEEEEecc---cCccchHHHHHHHHHHHhcCCcccceeeeeeeecce
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLN--G--QE-VAVKRLSS---QSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEE  545 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~--~--~~-vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  545 (795)
                      .++..+.++||+|+||.||+|++..  +  .. ||||....   .......+|.+|+++|++++|||||++||++.....
T Consensus       156 H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~P  235 (474)
T KOG0194|consen  156 HSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEP  235 (474)
T ss_pred             ccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCc
Confidence            3556677999999999999998643  2  23 89998874   234566789999999999999999999999999999


Q ss_pred             eeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccc
Q 003786          546 KILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR  625 (795)
Q Consensus       546 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~  625 (795)
                      +++|||+|+||+|+++|.....  .++..+...++.+.|.||+|||+++   +|||||..+|+|++.++.+||+||||++
T Consensus       236 l~ivmEl~~gGsL~~~L~k~~~--~v~~~ek~~~~~~AA~Gl~YLh~k~---~IHRDIAARNcL~~~~~~vKISDFGLs~  310 (474)
T KOG0194|consen  236 LMLVMELCNGGSLDDYLKKNKK--SLPTLEKLRFCYDAARGLEYLHSKN---CIHRDIAARNCLYSKKGVVKISDFGLSR  310 (474)
T ss_pred             cEEEEEecCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHhHHHHHHHCC---CcchhHhHHHheecCCCeEEeCcccccc
Confidence            9999999999999999954332  5889999999999999999999998   9999999999999999999999999988


Q ss_pred             ccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCccccc
Q 003786          626 IFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWE  704 (795)
Q Consensus       626 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  704 (795)
                      ......  .......-...|+|||.+....|+.++|||||||++||+++ |..|+......+..      ...       
T Consensus       311 ~~~~~~--~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~------~kI-------  375 (474)
T KOG0194|consen  311 AGSQYV--MKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVK------AKI-------  375 (474)
T ss_pred             CCccee--eccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHH------HHH-------
Confidence            643111  11111234678999999999999999999999999999998 77777654422111      000       


Q ss_pred             ccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccccCCCC
Q 003786          705 LIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLP  755 (795)
Q Consensus       705 ~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~~~l~  755 (795)
                       +........+...+..+..++.+|++.+|++||+|.++.+.|+.......
T Consensus       376 -~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~  425 (474)
T KOG0194|consen  376 -VKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE  425 (474)
T ss_pred             -HhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence             01111222233445667788889999999999999999999877544433

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=4.8e-37  Score=326.98  Aligned_cols=257  Identities=30%  Similarity=0.427  Sum_probs=202.9

Q ss_pred             cCCccccccCcCCcccEEEeEe-----cCcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeE
Q 003786          475 ANFSTENKLGEGGFGPVYKGRL-----LNGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKIL  548 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  548 (795)
                      .+|++.+.||+|+||.||+|+.     ..++.+|+|.+.... ......+.+|++++++++||||+++++++......++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l   84 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM   84 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence            5688889999999999999974     245789999986432 2334678899999999999999999999999999999


Q ss_pred             EeecCCCCChhhhhhccC--------------CcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCC
Q 003786          549 IYEYMPNKSLDFFLFDST--------------KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDM  614 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~--------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~  614 (795)
                      ||||+++++|.+++....              ....+++..+..++.||+.||.|||+++   |+||||||+|||++.++
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~nili~~~~  161 (283)
T cd05090          85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF---FVHKDLAARNILIGEQL  161 (283)
T ss_pred             EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC---eehhccccceEEEcCCC
Confidence            999999999999884321              1234778889999999999999999988   99999999999999999


Q ss_pred             CeeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhH
Q 003786          615 NPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHA  693 (795)
Q Consensus       615 ~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~  693 (795)
                      .+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..|+......  ......
T Consensus       162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~--~~~~~~  239 (283)
T cd05090         162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQ--EVIEMV  239 (283)
T ss_pred             cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHH
Confidence            999999999986543332222333456778999999988889999999999999999998 88887543221  111111


Q ss_pred             hhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          694 WDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       694 ~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                          ......         ..+...+.++.+++.+||+.+|++||++.+|+++|..
T Consensus       240 ----~~~~~~---------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         240 ----RKRQLL---------PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             ----HcCCcC---------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence                011100         1111234567889999999999999999999998854

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.1e-37  Score=333.32  Aligned_cols=240  Identities=23%  Similarity=0.263  Sum_probs=193.5

Q ss_pred             cCcCCcccEEEeEec-CcceEEEEEeccc---CccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCCCCCh
Q 003786          483 LGEGGFGPVYKGRLL-NGQEVAVKRLSSQ---SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSL  558 (795)
Q Consensus       483 LG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL  558 (795)
                      ||+|+||.||+|+.. +++.||+|++.+.   .......+.+|+.+|++++||||+++++++.+.+..++||||+++++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            799999999999875 4788999998653   223346678899999999999999999999999999999999999999


Q ss_pred             hhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcccccccc
Q 003786          559 DFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKR  638 (795)
Q Consensus       559 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~~~~  638 (795)
                      .+++..   ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+++......  .....
T Consensus        81 ~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--~~~~~  152 (312)
T cd05585          81 FHHLQR---EGRFDLSRARFYTAELLCALENLHKFN---VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD--DKTNT  152 (312)
T ss_pred             HHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHeEECCCCcEEEEECcccccCccCC--Ccccc
Confidence            988843   345889999999999999999999988   9999999999999999999999999998543221  12334


Q ss_pred             cccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhhHHH
Q 003786          639 IVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLI  718 (795)
Q Consensus       639 ~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~  718 (795)
                      ..||+.|+|||++.+..++.++|||||||++|||++|+.||........  ..   ..... .          ...+...
T Consensus       153 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~--~~---~~~~~-~----------~~~~~~~  216 (312)
T cd05585         153 FCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEM--YR---KILQE-P----------LRFPDGF  216 (312)
T ss_pred             ccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHH--HH---HHHcC-C----------CCCCCcC
Confidence            6799999999999999999999999999999999999999865332111  11   11110 0          0111223


Q ss_pred             HHHHHHHHHhhccCCCCCCCC---HHHHHHH
Q 003786          719 LNRYINVGLLCVQEDAADRPT---MFEVVSM  746 (795)
Q Consensus       719 ~~~l~~li~~cL~~dP~~RPt---~~evl~~  746 (795)
                      ...+.+++.+||+.||++||+   +.|++++
T Consensus       217 ~~~~~~li~~~L~~dp~~R~~~~~~~e~l~h  247 (312)
T cd05585         217 DRDAKDLLIGLLSRDPTRRLGYNGAQEIKNH  247 (312)
T ss_pred             CHHHHHHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence            456778999999999999985   5666664

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=3.9e-37  Score=328.62  Aligned_cols=258  Identities=29%  Similarity=0.446  Sum_probs=206.2

Q ss_pred             cCCccccccCcCCcccEEEeEec------CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeE
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL------NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKIL  548 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  548 (795)
                      .+|.+.+.||+|+||.||++...      ++..+|+|.+........+.+.+|++++++++||||+++++++...+..++
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   84 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence            57889999999999999999742      245689999876655556789999999999999999999999999999999


Q ss_pred             EeecCCCCChhhhhhccC----------CcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeee
Q 003786          549 IYEYMPNKSLDFFLFDST----------KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKI  618 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL  618 (795)
                      ||||+++++|.+++....          +...+++..+..++.|++.||+|||+++   ++||||||+||++++++.+||
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~---i~H~dlkp~Nili~~~~~~kl  161 (288)
T cd05093          85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKI  161 (288)
T ss_pred             EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCcEEe
Confidence            999999999999885432          2234889999999999999999999988   999999999999999999999


Q ss_pred             eccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhc
Q 003786          619 SDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLW  697 (795)
Q Consensus       619 ~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~  697 (795)
                      +|||++................+++.|+|||.+.+..++.++|||||||++|+|++ |..|+.......  ....    .
T Consensus       162 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~--~~~~----i  235 (288)
T cd05093         162 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE--VIEC----I  235 (288)
T ss_pred             ccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHH----H
Confidence            99999986543332222233446788999999998899999999999999999998 888875433211  1111    1


Q ss_pred             cCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          698 KDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       698 ~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                      .......         .+...+..+.+++.+||+.+|.+|||+.++++.|+..
T Consensus       236 ~~~~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~  279 (288)
T cd05093         236 TQGRVLQ---------RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNL  279 (288)
T ss_pred             HcCCcCC---------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence            1111110         0112334688999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=6.3e-37  Score=333.96  Aligned_cols=251  Identities=24%  Similarity=0.310  Sum_probs=198.6

Q ss_pred             CCccccccCcCCcccEEEeEe----cCcceEEEEEecccC----ccchHHHHHHHHHHHhc-CCcccceeeeeeeeccee
Q 003786          476 NFSTENKLGEGGFGPVYKGRL----LNGQEVAVKRLSSQS----GQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEEK  546 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~  546 (795)
                      +|++.++||+|+||.||+++.    .+++.||+|++.+..    ....+.+.+|+.+++++ +||||+++++++...+..
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            588899999999999999975    257889999986532    22345678899999999 599999999999999999


Q ss_pred             eEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          547 ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                      ++||||+++|+|..++..   ...+++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++.
T Consensus        81 ~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nili~~~~~~kl~DfG~~~~  154 (332)
T cd05614          81 HLILDYVSGGEMFTHLYQ---RDNFSEDEVRFYSGEIILALEHLHKLG---IVYRDIKLENILLDSEGHVVLTDFGLSKE  154 (332)
T ss_pred             EEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHeEECCCCCEEEeeCcCCcc
Confidence            999999999999988843   345889999999999999999999988   99999999999999999999999999986


Q ss_pred             cCCCcccccccccccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchh-HhHhHhhhccCccccc
Q 003786          627 FGGDELQSKTKRIVGTYGYMSPEYAQQG-LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLT-LLGHAWDLWKDDRAWE  704 (795)
Q Consensus       627 ~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~  704 (795)
                      +..... .......||+.|+|||++.+. .++.++|||||||++|||++|..||......... ....  ....      
T Consensus       155 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~--~~~~------  225 (332)
T cd05614         155 FLSEEK-ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSR--RILK------  225 (332)
T ss_pred             ccccCC-CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHH--HHhc------
Confidence            533221 122345799999999998765 5889999999999999999999999654322111 1110  0000      


Q ss_pred             ccCccccchhhHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHH
Q 003786          705 LIDPTLQNEASYLILNRYINVGLLCVQEDAADRP-----TMFEVVSM  746 (795)
Q Consensus       705 ~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RP-----t~~evl~~  746 (795)
                       .++.    .+......+.+++.+||+.||++||     ++++++++
T Consensus       226 -~~~~----~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h  267 (332)
T cd05614         226 -CDPP----FPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH  267 (332)
T ss_pred             -CCCC----CCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence             1111    1112344677899999999999999     77888876

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.6e-37  Score=323.61  Aligned_cols=248  Identities=23%  Similarity=0.324  Sum_probs=210.7

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      .-|.+.+.||+|.|.+|-++++. +|.+||||++.+..  ......+.+|++.|+.++|||||+||++......+|||+|
T Consensus        18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE   97 (864)
T KOG4717|consen   18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE   97 (864)
T ss_pred             eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence            45888899999999999999864 79999999997653  3345678899999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEE-CCCCCeeeeccccccccCCC
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILL-DKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll-~~~~~vkL~DFGla~~~~~~  630 (795)
                      .=++|+|.++|..+.  .-+.+..+.+++.||..|+.|+|+.+   +|||||||+|+.+ .+-|-|||+|||++..+.+.
T Consensus        98 LGD~GDl~DyImKHe--~Gl~E~La~kYF~QI~~AI~YCHqLH---VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG  172 (864)
T KOG4717|consen   98 LGDGGDLFDYIMKHE--EGLNEDLAKKYFAQIVHAISYCHQLH---VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG  172 (864)
T ss_pred             ecCCchHHHHHHhhh--ccccHHHHHHHHHHHHHHHHHHhhhh---hhcccCCcceeEEeeecCceEeeeccccccCCCc
Confidence            999999999996543  45889999999999999999999998   9999999999877 56789999999999887655


Q ss_pred             cccccccccccccccccccccccCCCC-cccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcc
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQQGLFS-IKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT  709 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~~~~~~-~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~  709 (795)
                      .   ...+.+|+..|.|||++.+..|+ +++||||||||||.|++|++||+..++....              ..++|-.
T Consensus       173 ~---kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETL--------------TmImDCK  235 (864)
T KOG4717|consen  173 K---KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETL--------------TMIMDCK  235 (864)
T ss_pred             c---hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhh--------------hhhhccc
Confidence            4   34557999999999999998886 6789999999999999999999765432221              1222322


Q ss_pred             ccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          710 LQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       710 l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                        -..+.....++.+||..||+.||++|.+.+||+..
T Consensus       236 --YtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~  270 (864)
T KOG4717|consen  236 --YTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVST  270 (864)
T ss_pred             --ccCchhhhHHHHHHHHHHHhcCchhhccHHHHhcc
Confidence              23456677899999999999999999999999874

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3e-37  Score=340.92  Aligned_cols=253  Identities=22%  Similarity=0.276  Sum_probs=199.5

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      ++|++.+.||+|+||.||+++.. +++.||||++.+..   ......+.+|+.+|+.++||||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM   80 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence            47899999999999999999865 58899999996532   233456789999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      ||+++|+|.+++..   ...+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++..+...
T Consensus        81 E~~~~g~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~  154 (364)
T cd05599          81 EYLPGGDMMTLLMK---KDTFTEEETRFYIAETILAIDSIHKLG---YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKS  154 (364)
T ss_pred             CCCCCcHHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEeecccceecccc
Confidence            99999999998843   345889999999999999999999998   999999999999999999999999998754321


Q ss_pred             cccc------------------------------------cccccccccccccccccccCCCCcccchhhHHHHHHHHHh
Q 003786          631 ELQS------------------------------------KTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS  674 (795)
Q Consensus       631 ~~~~------------------------------------~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt  674 (795)
                      ....                                    .....+||+.|+|||++.+..++.++|||||||++|||++
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~  234 (364)
T cd05599         155 HRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLV  234 (364)
T ss_pred             ccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhc
Confidence            1000                                    0112469999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCC---HHHHHHH
Q 003786          675 SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPT---MFEVVSM  746 (795)
Q Consensus       675 G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt---~~evl~~  746 (795)
                      |..||........  ...   ..........  +     ........+.+++.+|+. +|.+|++   +.|++++
T Consensus       235 G~~Pf~~~~~~~~--~~~---i~~~~~~~~~--~-----~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h  296 (364)
T cd05599         235 GYPPFCSDNPQET--YRK---IINWKETLQF--P-----DEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH  296 (364)
T ss_pred             CCCCCCCCCHHHH--HHH---HHcCCCccCC--C-----CCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence            9999975432111  110   0000000000  0     000123456788888997 9999998   9999886

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=4.6e-37  Score=335.33  Aligned_cols=259  Identities=28%  Similarity=0.395  Sum_probs=201.3

Q ss_pred             ccCCccccccCcCCcccEEEeEec------CcceEEEEEecccCc-cchHHHHHHHHHHHhc-CCcccceeeeeeeec-c
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL------NGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKL-QHRNLVRLLGCCIEL-E  544 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~-~  544 (795)
                      .++|++.+.||+|+||.||+|+..      +++.||+|++..... ...+.+.+|+++++++ +|+||+++++++... .
T Consensus         6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~   85 (337)
T cd05054           6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG   85 (337)
T ss_pred             HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence            357999999999999999999632      247899999864322 2335678899999999 899999999988654 5


Q ss_pred             eeeEEeecCCCCChhhhhhccCC---------------------------------------------------------
Q 003786          545 EKILIYEYMPNKSLDFFLFDSTK---------------------------------------------------------  567 (795)
Q Consensus       545 ~~~lv~E~~~~gsL~~~l~~~~~---------------------------------------------------------  567 (795)
                      ..+++|||+++++|.+++.....                                                         
T Consensus        86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (337)
T cd05054          86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL  165 (337)
T ss_pred             CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence            67899999999999988853221                                                         


Q ss_pred             -cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcccccccccccccccc
Q 003786          568 -ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM  646 (795)
Q Consensus       568 -~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~  646 (795)
                       ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+++.+.............++..|+
T Consensus       166 ~~~~l~~~~~~~~~~qi~~aL~~lH~~~---ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~  242 (337)
T cd05054         166 YKEPLTLEDLISYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM  242 (337)
T ss_pred             hhcCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcccc
Confidence             125788889999999999999999987   9999999999999999999999999998754332222233345678899


Q ss_pred             cccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhhHHHHHHHHHH
Q 003786          647 SPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINV  725 (795)
Q Consensus       647 APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l  725 (795)
                      |||++.+..++.++|||||||++|||++ |..|+........ +..    .......         ...+......+.++
T Consensus       243 aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~-~~~----~~~~~~~---------~~~~~~~~~~~~~l  308 (337)
T cd05054         243 APESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE-FCR----RLKEGTR---------MRAPEYATPEIYSI  308 (337)
T ss_pred             CcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH-HHH----HHhccCC---------CCCCccCCHHHHHH
Confidence            9999999999999999999999999998 9888864322111 110    0011100         01112234567899


Q ss_pred             HHhhccCCCCCCCCHHHHHHHHcc
Q 003786          726 GLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       726 i~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      +.+||+.+|++||++.||+++|+.
T Consensus       309 ~~~cl~~~p~~RPs~~ell~~l~~  332 (337)
T cd05054         309 MLDCWHNNPEDRPTFSELVEILGD  332 (337)
T ss_pred             HHHHccCChhhCcCHHHHHHHHHH
Confidence            999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=3.3e-37  Score=352.02  Aligned_cols=259  Identities=21%  Similarity=0.292  Sum_probs=206.5

Q ss_pred             HHHHccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecc--
Q 003786          470 VSAATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELE--  544 (795)
Q Consensus       470 i~~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--  544 (795)
                      +....++|++.+.||+|+||.||+++.. +++.||||++....  ......+.+|+.++..++|+||++++..+...+  
T Consensus        27 ~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~  106 (496)
T PTZ00283         27 AKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPR  106 (496)
T ss_pred             ccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceeccccc
Confidence            3445679999999999999999999854 68999999986542  334467889999999999999999988775433  


Q ss_pred             ------eeeEEeecCCCCChhhhhhccC-CcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCee
Q 003786          545 ------EKILIYEYMPNKSLDFFLFDST-KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPK  617 (795)
Q Consensus       545 ------~~~lv~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vk  617 (795)
                            ..++||||+++|+|.+++.... ....+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+|
T Consensus       107 ~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~---IiHrDLKP~NILl~~~~~vk  183 (496)
T PTZ00283        107 NPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH---MIHRDIKSANILLCSNGLVK  183 (496)
T ss_pred             CcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEeCCCCEE
Confidence                  3679999999999999886433 2356889999999999999999999988   99999999999999999999


Q ss_pred             eeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhc
Q 003786          618 ISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLW  697 (795)
Q Consensus       618 L~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~  697 (795)
                      |+|||+++.+.............||+.|+|||++.+..++.++|||||||++|||++|+.||.......  .....    
T Consensus       184 L~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~--~~~~~----  257 (496)
T PTZ00283        184 LGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEE--VMHKT----  257 (496)
T ss_pred             EEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH--HHHHH----
Confidence            999999987654332233345679999999999999999999999999999999999999986543211  11100    


Q ss_pred             cCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          698 KDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       698 ~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .....         ...+...+..+.+++.+||+.+|++||++.+++++
T Consensus       258 ~~~~~---------~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~  297 (496)
T PTZ00283        258 LAGRY---------DPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM  297 (496)
T ss_pred             hcCCC---------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence            00100         11122334578899999999999999999999875

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=1e-36  Score=325.51  Aligned_cols=264  Identities=26%  Similarity=0.347  Sum_probs=195.5

Q ss_pred             cCCccccccCcCCcccEEEeEec--CcceEEEEEecccCc--cchHHHHHHHHHHHhc---CCcccceeeeeee-----e
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL--NGQEVAVKRLSSQSG--QGQEEFKNEIKLIAKL---QHRNLVRLLGCCI-----E  542 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~~~~~-----~  542 (795)
                      ++|++.+.||+|+||.||+|+..  +++.||||++.....  .....+.+|+.+++.+   +||||+++++++.     .
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~   80 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   80 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence            46899999999999999999863  367899998865322  2234566788877766   6999999999885     3


Q ss_pred             cceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccc
Q 003786          543 LEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFG  622 (795)
Q Consensus       543 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFG  622 (795)
                      ....++||||++ ++|..++.... ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||
T Consensus        81 ~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~---iiH~dlkp~Nil~~~~~~~kl~Dfg  155 (290)
T cd07862          81 ETKLTLVFEHVD-QDLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFG  155 (290)
T ss_pred             CCcEEEEEccCC-CCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEcCCCCEEEcccc
Confidence            456889999997 57877774332 344788999999999999999999988   9999999999999999999999999


Q ss_pred             cccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchh-HhHhHhhhccCcc
Q 003786          623 MARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLT-LLGHAWDLWKDDR  701 (795)
Q Consensus       623 la~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~-~~~~~~~~~~~~~  701 (795)
                      +++.....   .......|++.|+|||.+.+..++.++|||||||++|||++|++||......... .............
T Consensus       156 ~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~  232 (290)
T cd07862         156 LARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEED  232 (290)
T ss_pred             ceEeccCC---cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhh
Confidence            99865433   2233457899999999998889999999999999999999999998765432211 0000000000000


Q ss_pred             cc-------cccCccc---cchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          702 AW-------ELIDPTL---QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       702 ~~-------~~id~~l---~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ..       ....+..   ...........+.+++.+||+.+|++|||+.|++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h  287 (290)
T cd07862         233 WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  287 (290)
T ss_pred             chhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence            00       0000000   011112234567799999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=4.2e-37  Score=341.98  Aligned_cols=252  Identities=22%  Similarity=0.295  Sum_probs=195.5

Q ss_pred             CCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      +|+++++||+|+||.||+|+.. +++.||||++.+..   ....+.+.+|+.++++++||||+++++.+.+.+..++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E   81 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD   81 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence            5889999999999999999864 58889999986542   2234578899999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      |+++|+|..++..   ...+++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||++..+....
T Consensus        82 ~~~gg~L~~~l~~---~~~~~e~~~~~~~~qi~~al~~lH~~~---ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~  155 (382)
T cd05625          82 YIPGGDMMSLLIR---MGIFPEDLARFYIAELTCAVESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH  155 (382)
T ss_pred             CCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEeECCCCccccccc
Confidence            9999999998843   345788899999999999999999998   9999999999999999999999999975331000


Q ss_pred             ---------------------------------------------ccccccccccccccccccccccCCCCcccchhhHH
Q 003786          632 ---------------------------------------------LQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFG  666 (795)
Q Consensus       632 ---------------------------------------------~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlG  666 (795)
                                                                   .........||+.|+|||++.+..++.++||||||
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG  235 (382)
T cd05625         156 DSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG  235 (382)
T ss_pred             cccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEech
Confidence                                                         00011235799999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCC---HHHH
Q 003786          667 VLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPT---MFEV  743 (795)
Q Consensus       667 vil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt---~~ev  743 (795)
                      |++|||++|+.||............   ..+.  .       .+.............+++.+|+ .+|++|++   +.|+
T Consensus       236 vil~elltG~~Pf~~~~~~~~~~~i---~~~~--~-------~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei  302 (382)
T cd05625         236 VILYEMLVGQPPFLAQTPLETQMKV---INWQ--T-------SLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEI  302 (382)
T ss_pred             HHHHHHHhCCCCCCCCCHHHHHHHH---HccC--C-------CcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHH
Confidence            9999999999999754322111100   0000  0       0000011122345567777765 49999997   8888


Q ss_pred             HHH
Q 003786          744 VSM  746 (795)
Q Consensus       744 l~~  746 (795)
                      ++|
T Consensus       303 ~~h  305 (382)
T cd05625         303 KAH  305 (382)
T ss_pred             hcC
Confidence            875

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.5e-37  Score=339.64  Aligned_cols=254  Identities=25%  Similarity=0.343  Sum_probs=204.1

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      ++|++.+.||+|+||.||+|+.. +++.||||++.+..   ......+.+|++++..++||||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM   80 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence            47899999999999999999865 58999999997542   234567889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      ||+++++|.+++...   ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++......
T Consensus        81 e~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~g---iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~  154 (350)
T cd05573          81 EYMPGGDLMNLLIRK---DVFPEETARFYIAELVLALDSVHKLG---FIHRDIKPDNILIDADGHIKLADFGLCKKMNKA  154 (350)
T ss_pred             cCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEeecCCCCccCccc
Confidence            999999999998543   56889999999999999999999988   999999999999999999999999999865432


Q ss_pred             c---------------------------ccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCC
Q 003786          631 E---------------------------LQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSN  683 (795)
Q Consensus       631 ~---------------------------~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~  683 (795)
                      .                           .........||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~  234 (350)
T cd05573         155 KDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT  234 (350)
T ss_pred             CcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC
Confidence            2                           0012234579999999999999999999999999999999999999987544


Q ss_pred             CcchhHhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCC-HHHHHHHH
Q 003786          684 TNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPT-MFEVVSML  747 (795)
Q Consensus       684 ~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt-~~evl~~L  747 (795)
                      ....  .... ..+...         +........+..+.+++..||+ +|.+||+ +.+++++.
T Consensus       235 ~~~~--~~~i-~~~~~~---------~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp  286 (350)
T cd05573         235 LQET--YNKI-INWKES---------LRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHP  286 (350)
T ss_pred             HHHH--HHHH-hccCCc---------ccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCC
Confidence            2111  1000 000000         0000001134567889999998 9999999 99999874

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=8.6e-37  Score=325.00  Aligned_cols=266  Identities=30%  Similarity=0.400  Sum_probs=202.1

Q ss_pred             CccccccCcCCcccEEEeEe-----cCcceEEEEEecccCc-cchHHHHHHHHHHHhcCCcccceeeeeeeec--ceeeE
Q 003786          477 FSTENKLGEGGFGPVYKGRL-----LNGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL--EEKIL  548 (795)
Q Consensus       477 ~~~~~~LG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l  548 (795)
                      |++.+.||+|+||+||++..     .+++.||+|.+..... .....+.+|+++|++++||||+++++++...  ...++
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL   85 (283)
T ss_pred             ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence            38889999999999988652     3577899999865432 3456788999999999999999999987754  35789


Q ss_pred             EeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccC
Q 003786          549 IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      ||||+++++|.+++..    ..+++..+..++.|+++||.|||+.+   |+||||||+||+++.++.+||+|||+++...
T Consensus        86 v~e~~~~~~l~~~~~~----~~l~~~~~~~i~~~l~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~  158 (283)
T cd05080          86 IMEYVPLGSLRDYLPK----HKLNLAQLLLFAQQICEGMAYLHSQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVP  158 (283)
T ss_pred             EecCCCCCCHHHHHHH----cCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccChheEEEcCCCcEEEeecccccccC
Confidence            9999999999998843    24889999999999999999999988   9999999999999999999999999998654


Q ss_pred             CCcccc-cccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccC
Q 003786          629 GDELQS-KTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID  707 (795)
Q Consensus       629 ~~~~~~-~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id  707 (795)
                      ...... ......++..|+|||.+.+..++.++||||||+++|||++|..|+........................+.++
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (283)
T cd05080         159 EGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLE  238 (283)
T ss_pred             CcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhh
Confidence            322111 1122345667999999988889999999999999999999999875433221111111111111111111222


Q ss_pred             ccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          708 PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       708 ~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      .......+...+..+.+++.+||+.+|++||++++|+++|+.
T Consensus       239 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~  280 (283)
T cd05080         239 RGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKE  280 (283)
T ss_pred             cCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence            221112233345678899999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.7e-36  Score=336.77  Aligned_cols=261  Identities=19%  Similarity=0.193  Sum_probs=196.8

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      ..+|++.++||+|+||.||++... +++.||+|...      ...+.+|+++|++++||||+++++++......++|+|+
T Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~  164 (391)
T PHA03212         91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR  164 (391)
T ss_pred             cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence            367999999999999999999864 58899999753      23578999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      +. ++|..++..   ...+++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++...... 
T Consensus       165 ~~-~~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~ylH~~~---IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~-  236 (391)
T PHA03212        165 YK-TDLYCYLAA---KRNIAICDILAIERSVLRAIQYLHENR---IIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN-  236 (391)
T ss_pred             CC-CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHhEEEcCCCCEEEEeCCccccccccc-
Confidence            86 577766633   235788999999999999999999988   9999999999999999999999999997543211 


Q ss_pred             cccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCc-----chhHhHhHhhhccCc--c----
Q 003786          633 QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTN-----SLTLLGHAWDLWKDD--R----  701 (795)
Q Consensus       633 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~-----~~~~~~~~~~~~~~~--~----  701 (795)
                      ........||+.|+|||++.+..++.++|||||||++|||++|..|+-.....     ....+..........  .    
T Consensus       237 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~  316 (391)
T PHA03212        237 ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPID  316 (391)
T ss_pred             ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcc
Confidence            11223467999999999999999999999999999999999999876432210     000000000000000  0    


Q ss_pred             ----ccc---------ccCccccc--hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHc
Q 003786          702 ----AWE---------LIDPTLQN--EASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT  748 (795)
Q Consensus       702 ----~~~---------~id~~l~~--~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~  748 (795)
                          ..+         ...+....  ......+..+.+++.+||+.||++|||++|++++--
T Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~  378 (391)
T PHA03212        317 AQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAA  378 (391)
T ss_pred             hhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChh
Confidence                000         00000000  011124557889999999999999999999998643

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=4.5e-37  Score=335.83  Aligned_cols=264  Identities=23%  Similarity=0.288  Sum_probs=195.6

Q ss_pred             CCccccccCcCCcccEEEeEec-CcceEEEEEeccc--CccchHHHHHHHHHHHhcCCcccceeeeeeeec-----ceee
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQ--SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL-----EEKI  547 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~~  547 (795)
                      +|++.++||+|+||.||+|+.. +++.||||++...  .......+.+|++++++++||||+++++++...     ...+
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   80 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY   80 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence            5888999999999999999864 5899999998643  223345688999999999999999999987643     2479


Q ss_pred             EEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccccc
Q 003786          548 LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF  627 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~  627 (795)
                      +||||+. ++|..++..   ...+++..+..++.||++||.|||+.+   |+||||||+|||++.++.+||+|||+++..
T Consensus        81 lv~e~~~-~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~  153 (338)
T cd07859          81 VVFELME-SDLHQVIKA---NDDLTPEHHQFFLYQLLRALKYIHTAN---VFHRDLKPKNILANADCKLKICDFGLARVA  153 (338)
T ss_pred             EEEecCC-CCHHHHHHh---cccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEccCcccccc
Confidence            9999996 578777743   345889999999999999999999998   999999999999999999999999999854


Q ss_pred             CCCcc-ccccccccccccccccccccc--CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchh-HhHhH--------hh
Q 003786          628 GGDEL-QSKTKRIVGTYGYMSPEYAQQ--GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLT-LLGHA--------WD  695 (795)
Q Consensus       628 ~~~~~-~~~~~~~~gt~~y~APE~~~~--~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~-~~~~~--------~~  695 (795)
                      ..... ........||+.|+|||++.+  ..++.++|||||||++|||++|+.||......... .....        ..
T Consensus       154 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  233 (338)
T cd07859         154 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETIS  233 (338)
T ss_pred             ccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHH
Confidence            32211 111234578999999999876  67899999999999999999999998754421110 00000        00


Q ss_pred             hccCcccc---cccCccccch---hhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          696 LWKDDRAW---ELIDPTLQNE---ASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       696 ~~~~~~~~---~~id~~l~~~---~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .+......   ..+.+.....   ........+.+++.+||+.+|++||+++|++++
T Consensus       234 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h  290 (338)
T cd07859         234 RVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD  290 (338)
T ss_pred             HhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence            00000000   0000000000   001123457799999999999999999999986

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=100.00  E-value=2e-36  Score=324.16  Aligned_cols=265  Identities=30%  Similarity=0.437  Sum_probs=205.7

Q ss_pred             ccCCccccccCcCCcccEEEeEecC-----------------cceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccce
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLN-----------------GQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVR  535 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~  535 (795)
                      ..+|++.++||+|+||.||+++...                 +..||+|.+.... ....+.+.+|++++++++||||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   83 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR   83 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence            4679999999999999999987542                 2458999987543 234567889999999999999999


Q ss_pred             eeeeeeecceeeEEeecCCCCChhhhhhccC--------CcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCc
Q 003786          536 LLGCCIELEEKILIYEYMPNKSLDFFLFDST--------KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASN  607 (795)
Q Consensus       536 l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~--------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~N  607 (795)
                      +++++..+...++++||+++++|..++....        ....+++..+..++.|++.||+|||+.+   |+||||||+|
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~---i~H~dlkp~N  160 (296)
T cd05051          84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN---FVHRDLATRN  160 (296)
T ss_pred             EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhc
Confidence            9999999999999999999999999986533        1235889999999999999999999988   9999999999


Q ss_pred             EEECCCCCeeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh--CCCCCCCCCCc
Q 003786          608 ILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS--SKRNTDFSNTN  685 (795)
Q Consensus       608 Ill~~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt--G~~p~~~~~~~  685 (795)
                      |+++.++.++|+|||+++...............+++.|+|||.+.+..++.++|||||||++|||++  +..|+....  
T Consensus       161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~--  238 (296)
T cd05051         161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLT--  238 (296)
T ss_pred             eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcC--
Confidence            9999999999999999986543332233334556789999999988889999999999999999998  455554322  


Q ss_pred             chhHhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          686 SLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       686 ~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      ...........+.........      ..+...+.++.+++.+||+.+|++||++.||+++|..
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~  296 (296)
T cd05051         239 DQQVIENAGHFFRDDGRQIYL------PRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR  296 (296)
T ss_pred             hHHHHHHHHhccccccccccC------CCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence            222222222111111111111      1112234578899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=8.4e-37  Score=321.95  Aligned_cols=255  Identities=31%  Similarity=0.472  Sum_probs=203.5

Q ss_pred             cCCccccccCcCCcccEEEeEecC----cceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLN----GQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      ++|++.+.||+|+||.||+|+...    ...||||++.... ......+.+|+.++++++||||+++++++.+.+..++|
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv   83 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII   83 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence            578999999999999999998642    4579999986543 23346788999999999999999999999999999999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      |||+++++|.+++....  ..+++..+..++.|++.||.|||+.+   |+|+||||+||+++.++.+||+|||+++....
T Consensus        84 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~  158 (266)
T cd05033          84 TEYMENGSLDKFLREND--GKFTVGQLVGMLRGIASGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRRLED  158 (266)
T ss_pred             EEcCCCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCCEEECccchhhcccc
Confidence            99999999999985432  36889999999999999999999987   99999999999999999999999999997652


Q ss_pred             CcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCc
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP  708 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~  708 (795)
                      ...........+++.|+|||.+.+..++.++||||||+++|+|++ |..|+.......  .....    .....      
T Consensus       159 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~--~~~~~----~~~~~------  226 (266)
T cd05033         159 SEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQD--VIKAV----EDGYR------  226 (266)
T ss_pred             cccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHH--HHHHH----HcCCC------
Confidence            221112222345678999999998899999999999999999997 888875332111  11111    11100      


Q ss_pred             cccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          709 TLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       709 ~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                         ...+...+..+.+++.+||+.+|++||++.||+++|+.
T Consensus       227 ---~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~  264 (266)
T cd05033         227 ---LPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDK  264 (266)
T ss_pred             ---CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence               01112234567899999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=7.9e-37  Score=337.27  Aligned_cols=254  Identities=22%  Similarity=0.303  Sum_probs=195.6

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      ++|++.+.||+|+||.||+++.. +++.||||++.+..   ......+++|+.++.+++||||+++++.+.+....++||
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence            47899999999999999999865 58899999996532   223456888999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      ||+++|+|.+++..   .+.+++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++.....
T Consensus        81 E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~~g---ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~~  154 (363)
T cd05628          81 EFLPGGDMMTLLMK---KDTLTEEETQFYIAETVLAIDSIHQLG---FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKA  154 (363)
T ss_pred             cCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCCEEEeeccCccccccc
Confidence            99999999999843   345889999999999999999999988   999999999999999999999999998754321


Q ss_pred             ccc---------------------------------ccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCC
Q 003786          631 ELQ---------------------------------SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKR  677 (795)
Q Consensus       631 ~~~---------------------------------~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~  677 (795)
                      ...                                 ......+||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~  234 (363)
T cd05628         155 HRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP  234 (363)
T ss_pred             ccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCC
Confidence            100                                 00123579999999999999999999999999999999999999


Q ss_pred             CCCCCCCcchhHhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhcc--CCCCCCCCHHHHHHH
Q 003786          678 NTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQ--EDAADRPTMFEVVSM  746 (795)
Q Consensus       678 p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~--~dP~~RPt~~evl~~  746 (795)
                      ||........  ...... +... .  .+.+.      ......+.+++.+++.  .++..||+++||+++
T Consensus       235 Pf~~~~~~~~--~~~i~~-~~~~-~--~~p~~------~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h  293 (363)
T cd05628         235 PFCSETPQET--YKKVMN-WKET-L--IFPPE------VPISEKAKDLILRFCCEWEHRIGAPGVEEIKTN  293 (363)
T ss_pred             CCCCCCHHHH--HHHHHc-CcCc-c--cCCCc------CCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence            9965432211  111100 0000 0  00110      0122345566666443  344457999999987

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=8.6e-37  Score=321.39  Aligned_cols=254  Identities=28%  Similarity=0.412  Sum_probs=204.4

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecC
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYM  553 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  553 (795)
                      .+|++.++||+|+||.||+|... .++.||+|++... ....+++.+|++++++++||||+++++++......+++|||+
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM   84 (263)
T ss_pred             HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence            45888899999999999999865 4888999998643 334567899999999999999999999999999999999999


Q ss_pred             CCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccc
Q 003786          554 PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ  633 (795)
Q Consensus       554 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~  633 (795)
                      ++++|.+++.... ...+++..+..++.|+++||+|||+.+   ++||||||+||++++++.+||+|||++.........
T Consensus        85 ~~~~L~~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~  160 (263)
T cd05052          85 TYGNLLDYLRECN-RQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT  160 (263)
T ss_pred             CCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCcEEeCCCccccccccceee
Confidence            9999999885432 345788899999999999999999987   999999999999999999999999999876433221


Q ss_pred             ccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCccccc
Q 003786          634 SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQN  712 (795)
Q Consensus       634 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~  712 (795)
                       ......++..|+|||.+.+..++.++|||||||++|||++ |..|++.......  .    ......         ...
T Consensus       161 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~--~----~~~~~~---------~~~  224 (263)
T cd05052         161 -AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV--Y----ELLEKG---------YRM  224 (263)
T ss_pred             -ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH--H----HHHHCC---------CCC
Confidence             1112234678999999998999999999999999999998 8888865332111  1    111110         011


Q ss_pred             hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          713 EASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       713 ~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      ..+...+..+.+++.+||+.+|++||++.+++++|+.
T Consensus       225 ~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~  261 (263)
T cd05052         225 ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFET  261 (263)
T ss_pred             CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHh
Confidence            1122234578889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.2e-37  Score=340.59  Aligned_cols=254  Identities=22%  Similarity=0.264  Sum_probs=197.3

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      ++|++.++||+|+||.||+++.. +++.||||++.+..   ....+.+++|++++++++||||+++++++.+....++||
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~   80 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM   80 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence            47899999999999999999854 68899999986532   223456889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      ||+++|+|.+++..   ...+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++.+...
T Consensus        81 E~~~gg~L~~~l~~---~~~~~~~~~~~~~~ql~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~~  154 (377)
T cd05629          81 EFLPGGDLMTMLIK---YDTFSEDVTRFYMAECVLAIEAVHKLG---FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQ  154 (377)
T ss_pred             eCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEEeecccccccccc
Confidence            99999999998843   345788899999999999999999998   999999999999999999999999998643210


Q ss_pred             cc-------------c--------------------------------ccccccccccccccccccccCCCCcccchhhH
Q 003786          631 EL-------------Q--------------------------------SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSF  665 (795)
Q Consensus       631 ~~-------------~--------------------------------~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSl  665 (795)
                      ..             .                                .......||+.|+|||++.+..++.++|||||
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl  234 (377)
T cd05629         155 HDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSL  234 (377)
T ss_pred             cccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEec
Confidence            00             0                                00012469999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCC---CCHHH
Q 003786          666 GVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADR---PTMFE  742 (795)
Q Consensus       666 Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~R---Pt~~e  742 (795)
                      ||++|||++|..||........  ....   ........+  +     ........+.+++.+||+ +|.+|   |++.|
T Consensus       235 Gvil~elltG~~Pf~~~~~~~~--~~~i---~~~~~~~~~--p-----~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~  301 (377)
T cd05629         235 GAIMFECLIGWPPFCSENSHET--YRKI---INWRETLYF--P-----DDIHLSVEAEDLIRRLIT-NAENRLGRGGAHE  301 (377)
T ss_pred             chhhhhhhcCCCCCCCCCHHHH--HHHH---HccCCccCC--C-----CCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHH
Confidence            9999999999999965442211  1100   000000000  0     001123457789999998 66665   69999


Q ss_pred             HHHHH
Q 003786          743 VVSML  747 (795)
Q Consensus       743 vl~~L  747 (795)
                      ++++.
T Consensus       302 ~l~hp  306 (377)
T cd05629         302 IKSHP  306 (377)
T ss_pred             HhcCC
Confidence            99874

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=6.3e-37  Score=332.56  Aligned_cols=242  Identities=25%  Similarity=0.325  Sum_probs=194.7

Q ss_pred             cccCcCCcccEEEeEe----cCcceEEEEEecccC----ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          481 NKLGEGGFGPVYKGRL----LNGQEVAVKRLSSQS----GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      ++||+|+||.||+++.    ..++.||||++.+..    ......+.+|+.+|+.++||||+++++++..++..++||||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            6899999999999975    357889999986532    22335678899999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      +++++|..++..   .+.+.+..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++...... 
T Consensus        82 ~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-  154 (323)
T cd05584          82 LSGGELFMHLER---EGIFMEDTACFYLSEISLALEHLHQQG---IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG-  154 (323)
T ss_pred             CCCchHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEeeCcCCeecccCC-
Confidence            999999888843   345778889999999999999999988   9999999999999999999999999987532221 


Q ss_pred             cccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccc
Q 003786          633 QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQN  712 (795)
Q Consensus       633 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~  712 (795)
                       .......||+.|+|||++.+..++.++|||||||++|||++|+.||........  ...   .. ....          
T Consensus       155 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~--~~~---~~-~~~~----------  217 (323)
T cd05584         155 -TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKT--IDK---IL-KGKL----------  217 (323)
T ss_pred             -CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHH--HHH---HH-cCCC----------
Confidence             122345799999999999988899999999999999999999999875432111  111   00 0100          


Q ss_pred             hhhHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHH
Q 003786          713 EASYLILNRYINVGLLCVQEDAADRP-----TMFEVVSM  746 (795)
Q Consensus       713 ~~~~~~~~~l~~li~~cL~~dP~~RP-----t~~evl~~  746 (795)
                      ..+......+.+++.+||+.+|++||     ++.+++++
T Consensus       218 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h  256 (323)
T cd05584         218 NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH  256 (323)
T ss_pred             CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence            01112335678999999999999999     89998885

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=8.3e-37  Score=320.25  Aligned_cols=252  Identities=29%  Similarity=0.424  Sum_probs=202.5

Q ss_pred             cCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCC
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMP  554 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~  554 (795)
                      ++|++.+.||+|+||.||+|+..++..+|||.+... ....+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS   82 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCC-cccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence            568889999999999999998877778999988643 3345779999999999999999999999999999999999999


Q ss_pred             CCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcccc
Q 003786          555 NKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQS  634 (795)
Q Consensus       555 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~  634 (795)
                      +++|.+++....  ..+++..+..++.||+.||+|||+.+   ++|+||||+||+++.++.+||+|||+++........ 
T Consensus        83 ~~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~-  156 (256)
T cd05113          83 NGCLLNYLREHG--KRFQPSQLLEMCKDVCEGMAYLESKQ---FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYT-  156 (256)
T ss_pred             CCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCCEEECCCccceecCCCcee-
Confidence            999999885432  25789999999999999999999988   999999999999999999999999998865433221 


Q ss_pred             cccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCccccch
Q 003786          635 KTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNE  713 (795)
Q Consensus       635 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~  713 (795)
                      ......++..|+|||.+.+..++.++|||||||++|+|++ |..|+........  ....   ....+.          .
T Consensus       157 ~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~--~~~~---~~~~~~----------~  221 (256)
T cd05113         157 SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSET--VEKV---SQGLRL----------Y  221 (256)
T ss_pred             ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHH--HHHH---hcCCCC----------C
Confidence            1112345678999999988889999999999999999998 8888764332111  1111   000000          0


Q ss_pred             hhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHc
Q 003786          714 ASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT  748 (795)
Q Consensus       714 ~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~  748 (795)
                      .+......+.+++.+||+.+|++||++.+|++.|+
T Consensus       222 ~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         222 RPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence            01112457789999999999999999999998774

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=6.1e-37  Score=331.72  Aligned_cols=255  Identities=26%  Similarity=0.428  Sum_probs=200.3

Q ss_pred             cCCccccccCcCCcccEEEeEec-Ccc----eEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeE
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQ----EVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKIL  548 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  548 (795)
                      .+|++.+.||+|+||.||+|+.. +++    .||||++.... ....+++.+|+.+++.++||||+++++++... ..++
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~   85 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   85 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence            56999999999999999999853 333    38999986543 33456788999999999999999999998764 5779


Q ss_pred             EeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccC
Q 003786          549 IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      ++||+++|+|.+++...  ...+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++...
T Consensus        86 v~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~LH~~~---iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~  160 (316)
T cd05108          86 ITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEERR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG  160 (316)
T ss_pred             eeecCCCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEecCCCcEEEcccccccccc
Confidence            99999999999988543  234788899999999999999999988   9999999999999999999999999998765


Q ss_pred             CCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccC
Q 003786          629 GDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID  707 (795)
Q Consensus       629 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id  707 (795)
                      ............++..|+|||.+.+..++.++|||||||++|||++ |..|++.......  ..    .......     
T Consensus       161 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~--~~----~~~~~~~-----  229 (316)
T cd05108         161 ADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI--SS----ILEKGER-----  229 (316)
T ss_pred             CCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHH--HH----HHhCCCC-----
Confidence            4332222222334678999999999999999999999999999997 9988865332211  11    0111100     


Q ss_pred             ccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          708 PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       708 ~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                          ...+......+.+++.+||+.+|++||++.+++..|...
T Consensus       230 ----~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~  268 (316)
T cd05108         230 ----LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM  268 (316)
T ss_pred             ----CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence                001111234677899999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=1.8e-37  Score=325.96  Aligned_cols=250  Identities=34%  Similarity=0.515  Sum_probs=193.6

Q ss_pred             cccccCcCCcccEEEeEec-----CcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          479 TENKLGEGGFGPVYKGRLL-----NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       479 ~~~~LG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      +.+.||.|.||.||+|.+.     .+..|+||.+.... ....+.+.+|++.+++++||||+++++++.+.+..++|+||
T Consensus         3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~   82 (259)
T PF07714_consen    3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY   82 (259)
T ss_dssp             EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred             EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence            4678999999999999865     26779999996533 23468899999999999999999999999988889999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      +++|+|.+++... ....+++..+..++.||++||+|||+.+   ++|++|+++||+++.++.+||+|||++........
T Consensus        83 ~~~g~L~~~L~~~-~~~~~~~~~~~~i~~~i~~~l~~Lh~~~---iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~  158 (259)
T PF07714_consen   83 CPGGSLDDYLKSK-NKEPLSEQQRLSIAIQIAEALSYLHSNN---IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK  158 (259)
T ss_dssp             -TTEBHHHHHHHT-CTTTSBHHHHHHHHHHHHHHHHHHHHTT---EEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS
T ss_pred             ccccccccccccc-cccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccc
Confidence            9999999999654 2345889999999999999999999987   99999999999999999999999999987633332


Q ss_pred             cccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCcccc
Q 003786          633 QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQ  711 (795)
Q Consensus       633 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~  711 (795)
                      ............|+|||.+....++.++||||||+++|||++ |+.|+.....  .......    .....         
T Consensus       159 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~--~~~~~~~----~~~~~---------  223 (259)
T PF07714_consen  159 YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN--EEIIEKL----KQGQR---------  223 (259)
T ss_dssp             EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH--HHHHHHH----HTTEE---------
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccc--ccccccc----ccccc---------
Confidence            223333457789999999999889999999999999999999 6777654321  1111111    11111         


Q ss_pred             chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          712 NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       712 ~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                      ...+...+..+.+++..||+.+|++||++.+|++.|
T Consensus       224 ~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  224 LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence            111222345678999999999999999999999876

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=3.8e-37  Score=341.62  Aligned_cols=253  Identities=22%  Similarity=0.299  Sum_probs=197.6

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      .+|++.++||+|+||.||+++.. +++.||||++.+..   ......+.+|+++|++++||||+++++.+.+.+..++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM   80 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence            36899999999999999999864 58899999986532   223466889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      ||+++|+|.+++..   ...+++..+..++.||+.||+|||+++   |+||||||+|||++.++.+||+|||++..+...
T Consensus        81 E~~~~g~L~~~i~~---~~~~~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~  154 (376)
T cd05598          81 DYIPGGDMMSLLIR---LGIFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT  154 (376)
T ss_pred             eCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHEEECCCCCEEEEeCCCCcccccc
Confidence            99999999999843   345788899999999999999999988   999999999999999999999999997533100


Q ss_pred             c-----------------------------------------ccccccccccccccccccccccCCCCcccchhhHHHHH
Q 003786          631 E-----------------------------------------LQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLL  669 (795)
Q Consensus       631 ~-----------------------------------------~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil  669 (795)
                      .                                         .........||+.|||||++.+..++.++|||||||++
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil  234 (376)
T cd05598         155 HDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL  234 (376)
T ss_pred             ccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeecccee
Confidence            0                                         00001235799999999999999999999999999999


Q ss_pred             HHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCC---CHHHHHHH
Q 003786          670 LETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRP---TMFEVVSM  746 (795)
Q Consensus       670 ~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RP---t~~evl~~  746 (795)
                      |||++|+.||.............   .+...  ..  .+     ........+.+++.+|+ .+|++|+   ++.|++++
T Consensus       235 yell~G~~Pf~~~~~~~~~~~i~---~~~~~--~~--~~-----~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h  301 (376)
T cd05598         235 YEMLVGQPPFLADTPAETQLKVI---NWETT--LH--IP-----SQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAH  301 (376)
T ss_pred             eehhhCCCCCCCCCHHHHHHHHh---ccCcc--cc--CC-----CCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence            99999999997654322111100   00000  00  00     01112345566777766 4999999   89999987

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=2.6e-36  Score=320.93  Aligned_cols=247  Identities=25%  Similarity=0.309  Sum_probs=196.6

Q ss_pred             cCcCCcccEEEeEec-CcceEEEEEecccCc---cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCCCCCh
Q 003786          483 LGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG---QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSL  558 (795)
Q Consensus       483 LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL  558 (795)
                      ||+|+||+||+++.. +++.||+|++.+...   ...+.+..|++++++++||||+++++++......++||||+++++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            799999999999865 588999999865322   2335678899999999999999999999999999999999999999


Q ss_pred             hhhhhccC-CcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccccccc
Q 003786          559 DFFLFDST-KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTK  637 (795)
Q Consensus       559 ~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~~~  637 (795)
                      ...+.... ....+++..+..++.||+.||.|||+.+   |+||||||+||+++.++.+||+|||++........  ...
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~--~~~  155 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR---IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS--KTK  155 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCccceecCCCCc--ccc
Confidence            88775422 3456889999999999999999999988   99999999999999999999999999976543321  223


Q ss_pred             ccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhhHH
Q 003786          638 RIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYL  717 (795)
Q Consensus       638 ~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~  717 (795)
                      ...||+.|+|||.+.+..++.++|||||||++|||++|+.||........... ......         ...  ...+..
T Consensus       156 ~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~-~~~~~~---------~~~--~~~~~~  223 (280)
T cd05608         156 GYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE-LKQRIL---------NDS--VTYPDK  223 (280)
T ss_pred             ccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHH-HHHhhc---------ccC--CCCccc
Confidence            45789999999999999999999999999999999999999875432211100 000000         000  011223


Q ss_pred             HHHHHHHHHHhhccCCCCCCC-----CHHHHHHH
Q 003786          718 ILNRYINVGLLCVQEDAADRP-----TMFEVVSM  746 (795)
Q Consensus       718 ~~~~l~~li~~cL~~dP~~RP-----t~~evl~~  746 (795)
                      .+..+.+++.+||+.+|++||     ++++++++
T Consensus       224 ~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h  257 (280)
T cd05608         224 FSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH  257 (280)
T ss_pred             CCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence            445678899999999999999     77888875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.9e-36  Score=324.53  Aligned_cols=265  Identities=28%  Similarity=0.411  Sum_probs=200.0

Q ss_pred             cCCccccccCcCCcccEEEeEecC---------------cceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeee
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLN---------------GQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLG  538 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~---------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~  538 (795)
                      .+|++.++||+|+||.||+++...               ...||+|.+.... ....+.+.+|++++++++||||+++++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~   84 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG   84 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence            579999999999999999987532               2348999986542 233457899999999999999999999


Q ss_pred             eeeecceeeEEeecCCCCChhhhhhccCC---------cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEE
Q 003786          539 CCIELEEKILIYEYMPNKSLDFFLFDSTK---------ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNIL  609 (795)
Q Consensus       539 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~---------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIl  609 (795)
                      ++...+..++||||+++++|.+++.....         ...+++..+..++.|++.||+|||+.+   ++||||||+||+
T Consensus        85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil  161 (295)
T cd05097          85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN---FVHRDLATRNCL  161 (295)
T ss_pred             EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC---eeccccChhhEE
Confidence            99999999999999999999998854221         123678888999999999999999988   999999999999


Q ss_pred             ECCCCCeeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhH
Q 003786          610 LDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTL  689 (795)
Q Consensus       610 l~~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~  689 (795)
                      ++.++.+||+|||++................++..|+|||.+..+.++.++|||||||++|+|+++..+.++........
T Consensus       162 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~  241 (295)
T cd05097         162 VGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQV  241 (295)
T ss_pred             EcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHH
Confidence            99999999999999986543322222223345778999999988889999999999999999998543333322222222


Q ss_pred             hHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHc
Q 003786          690 LGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT  748 (795)
Q Consensus       690 ~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~  748 (795)
                      .......+.......      ....+...+..+.+++.+|++.+|++||++.+|++.|.
T Consensus       242 ~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         242 IENTGEFFRNQGRQI------YLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             HHHHHHhhhhccccc------cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence            211111111110000      00111123457889999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=1.2e-36  Score=317.95  Aligned_cols=248  Identities=27%  Similarity=0.390  Sum_probs=195.4

Q ss_pred             cccCcCCcccEEEeEec-CcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCCCCCh
Q 003786          481 NKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSL  558 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL  558 (795)
                      ++||+|+||.||+|+.. +++.+|+|.+.... ......+.+|++++++++||||+++++++......++||||+++++|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF   80 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence            46999999999999864 68899999886543 23456789999999999999999999999999999999999999999


Q ss_pred             hhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcccccccc
Q 003786          559 DFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKR  638 (795)
Q Consensus       559 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~~~~  638 (795)
                      .+++...  ...+++..+..++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||++..............
T Consensus        81 ~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~  155 (252)
T cd05084          81 LTFLRTE--GPRLKVKELIQMVENAAAGMEYLESKH---CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGM  155 (252)
T ss_pred             HHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEEcCCCcEEECccccCcccccccccccCCC
Confidence            9988432  235788999999999999999999988   99999999999999999999999999875432211111111


Q ss_pred             cccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhhHH
Q 003786          639 IVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYL  717 (795)
Q Consensus       639 ~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~  717 (795)
                      ...+..|+|||.+.++.++.++|||||||++|||++ |..|+........  ....    ..         ......+..
T Consensus       156 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~--~~~~----~~---------~~~~~~~~~  220 (252)
T cd05084         156 KQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQT--REAI----EQ---------GVRLPCPEL  220 (252)
T ss_pred             CCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHH--HHHH----Hc---------CCCCCCccc
Confidence            223467999999998899999999999999999997 7777754322111  1000    00         000111222


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCHHHHHHHHc
Q 003786          718 ILNRYINVGLLCVQEDAADRPTMFEVVSMLT  748 (795)
Q Consensus       718 ~~~~l~~li~~cL~~dP~~RPt~~evl~~L~  748 (795)
                      .+..+.+++.+||+.+|++||++.+|+++|.
T Consensus       221 ~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         221 CPDAVYRLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence            3457788999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.5e-37  Score=357.63  Aligned_cols=258  Identities=31%  Similarity=0.480  Sum_probs=211.0

Q ss_pred             cCCccccccCcCCcccEEEeEecC--cc----eEEEEEeccc-CccchHHHHHHHHHHHhcCCcccceeeeeeeecceee
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLN--GQ----EVAVKRLSSQ-SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKI  547 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~--~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  547 (795)
                      ...++.+.||+|.||.||.|...+  +.    .||||.+.+. +.+...+|.+|..+|++++|||||+++|++.+....+
T Consensus       692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~  771 (1025)
T KOG1095|consen  692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPL  771 (1025)
T ss_pred             hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcE
Confidence            456778899999999999998643  33    3899999765 4456688999999999999999999999999999999


Q ss_pred             EEeecCCCCChhhhhhccCC----cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccc
Q 003786          548 LIYEYMPNKSLDFFLFDSTK----ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGM  623 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGl  623 (795)
                      +++|||.+|+|..+|++.+.    ...+...+.+.++.+||+|+.|||+++   +|||||..+|+||+....|||+||||
T Consensus       772 i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~---fvHRDLAaRNCLL~~~r~VKIaDFGl  848 (1025)
T KOG1095|consen  772 ILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH---FVHRDLAARNCLLDERRVVKIADFGL  848 (1025)
T ss_pred             EEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC---CcCcchhhhheeecccCcEEEcccch
Confidence            99999999999999976532    345788899999999999999999998   99999999999999999999999999


Q ss_pred             ccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCccc
Q 003786          624 ARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRA  702 (795)
Q Consensus       624 a~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~  702 (795)
                      |+.+...++........-...|||||.++.+.|+.|+|||||||+|||+++ |..|++..+..+...  .+   ...+  
T Consensus       849 ArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~--~~---~~gg--  921 (1025)
T KOG1095|consen  849 ARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLL--DV---LEGG--  921 (1025)
T ss_pred             hHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHH--HH---HhCC--
Confidence            996655554443333233568999999999999999999999999999997 666766544322211  11   1111  


Q ss_pred             ccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          703 WELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       703 ~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                              +-+.+..++..+.+|+..||+.+|++||++..|++.+...
T Consensus       922 --------RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i  961 (1025)
T KOG1095|consen  922 --------RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAI  961 (1025)
T ss_pred             --------ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhh
Confidence                    2234556777888999999999999999999999977653

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=3.2e-36  Score=325.95  Aligned_cols=242  Identities=27%  Similarity=0.355  Sum_probs=191.0

Q ss_pred             cccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHh-cCCcccceeeeeeeecceeeEEeecCCC
Q 003786          481 NKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAK-LQHRNLVRLLGCCIELEEKILIYEYMPN  555 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~~~~~~lv~E~~~~  555 (795)
                      +.||+|+||.||+|+.. +++.||||++.+..   ....+.+..|..++.. .+||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            46999999999999865 47889999987532   2234455667777765 4899999999999999999999999999


Q ss_pred             CChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccccc
Q 003786          556 KSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK  635 (795)
Q Consensus       556 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~  635 (795)
                      ++|..++..   ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+++......  ..
T Consensus        81 g~L~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~--~~  152 (316)
T cd05592          81 GDLMFHIQS---SGRFDEARARFYAAEIICGLQFLHKKG---IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE--GK  152 (316)
T ss_pred             CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC--Cc
Confidence            999888843   345888999999999999999999988   9999999999999999999999999997543222  22


Q ss_pred             ccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhh
Q 003786          636 TKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEAS  715 (795)
Q Consensus       636 ~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~  715 (795)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+....  ....   .. ..      +    ..+
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~--~~~i---~~-~~------~----~~~  216 (316)
T cd05592         153 ASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDEL--FDSI---LN-DR------P----HFP  216 (316)
T ss_pred             cccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHH--HHHH---Hc-CC------C----CCC
Confidence            3346799999999999998999999999999999999999999875432211  1110   00 00      0    011


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCHH-HHHHH
Q 003786          716 YLILNRYINVGLLCVQEDAADRPTMF-EVVSM  746 (795)
Q Consensus       716 ~~~~~~l~~li~~cL~~dP~~RPt~~-evl~~  746 (795)
                      ......+.+++.+||+.+|++||++. +++++
T Consensus       217 ~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h  248 (316)
T cd05592         217 RWISKEAKDCLSKLFERDPTKRLGVDGDIRQH  248 (316)
T ss_pred             CCCCHHHHHHHHHHccCCHHHcCCChHHHHcC
Confidence            12334667899999999999999875 56553

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=9.6e-37  Score=331.32  Aligned_cols=246  Identities=23%  Similarity=0.330  Sum_probs=195.6

Q ss_pred             CccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHH---HhcCCcccceeeeeeeecceeeEE
Q 003786          477 FSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLI---AKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       477 ~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l---~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      |++.+.||+|+||.||+|+.. +++.||||++.+..   ....+.+.+|++++   +.++||||+++++++.+.+..++|
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            677899999999999999864 58999999997542   22345677776665   466799999999999999999999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      |||+++++|...+.    ...+++..+..++.||+.||.|||+.+   |+||||||+||+++.++.+||+|||+++....
T Consensus        81 ~E~~~~~~L~~~~~----~~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~  153 (324)
T cd05589          81 MEYAAGGDLMMHIH----TDVFSEPRAVFYAACVVLGLQYLHENK---IVYRDLKLDNLLLDTEGFVKIADFGLCKEGMG  153 (324)
T ss_pred             EcCCCCCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCcEEeCcccCCccCCC
Confidence            99999999988773    245899999999999999999999988   99999999999999999999999999875322


Q ss_pred             CcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcc
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT  709 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~  709 (795)
                      ..  .......|++.|+|||++.+..++.++|||||||++|||++|+.||........  ....   .. ..      . 
T Consensus       154 ~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~--~~~i---~~-~~------~-  218 (324)
T cd05589         154 FG--DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEV--FDSI---VN-DE------V-  218 (324)
T ss_pred             CC--CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHH--HHHH---Hh-CC------C-
Confidence            11  223346799999999999999999999999999999999999999875432211  1100   00 00      0 


Q ss_pred             ccchhhHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHHH
Q 003786          710 LQNEASYLILNRYINVGLLCVQEDAADRP-----TMFEVVSML  747 (795)
Q Consensus       710 l~~~~~~~~~~~l~~li~~cL~~dP~~RP-----t~~evl~~L  747 (795)
                         ..+......+.+++.+||+.||++||     ++.+++++.
T Consensus       219 ---~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~  258 (324)
T cd05589         219 ---RYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQP  258 (324)
T ss_pred             ---CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCC
Confidence               01112345677899999999999999     677887753

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.2e-36  Score=318.91  Aligned_cols=252  Identities=29%  Similarity=0.438  Sum_probs=201.7

Q ss_pred             cCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCC
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMP  554 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~  554 (795)
                      .+|++.+.||+|+||.||+++...+..+|+|++.... .....+.+|++++++++||||+++++++.+.+..++||||++
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA   82 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCC
Confidence            4588899999999999999988777889999986432 345678899999999999999999999999999999999999


Q ss_pred             CCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcccc
Q 003786          555 NKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQS  634 (795)
Q Consensus       555 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~  634 (795)
                      +++|.+++....  ..+++..+..++.||++||+|||+.+   |+||||||+||+++.++.+||+|||+++........ 
T Consensus        83 ~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~-  156 (256)
T cd05059          83 NGCLLNYLRERK--GKLGTEWLLDMCSDVCEAMEYLESNG---FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT-  156 (256)
T ss_pred             CCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHhhEEECCCCcEEECCcccceeccccccc-
Confidence            999999885432  35789999999999999999999988   999999999999999999999999999865422211 


Q ss_pred             cccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCccccch
Q 003786          635 KTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNE  713 (795)
Q Consensus       635 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~  713 (795)
                      ......++..|+|||.+.+..++.++||||||+++|+|++ |..|+.......  .....    ...         ....
T Consensus       157 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~~----~~~---------~~~~  221 (256)
T cd05059         157 SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE--VVESV----SAG---------YRLY  221 (256)
T ss_pred             ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH--HHHHH----HcC---------CcCC
Confidence            1111234567999999998899999999999999999998 788876433211  11111    000         0001


Q ss_pred             hhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHc
Q 003786          714 ASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT  748 (795)
Q Consensus       714 ~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~  748 (795)
                      .+...+..+.+++.+||+.+|++||++.|++++|.
T Consensus       222 ~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l~  256 (256)
T cd05059         222 RPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQLT  256 (256)
T ss_pred             CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHhC
Confidence            11123557889999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=7.4e-37  Score=325.45  Aligned_cols=257  Identities=30%  Similarity=0.411  Sum_probs=202.3

Q ss_pred             cCCccccccCcCCcccEEEeEec------CcceEEEEEecccCcc-chHHHHHHHHHHHhcCCcccceeeeeeeecceee
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL------NGQEVAVKRLSSQSGQ-GQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKI  547 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  547 (795)
                      .+|++.++||+|+||.||+|+..      .++.||||++...... ..+.+.+|+.++.+++||||+++++++.+....+
T Consensus         5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~   84 (283)
T cd05091           5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLS   84 (283)
T ss_pred             HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceE
Confidence            45788899999999999999753      2578999999754322 2466889999999999999999999999999999


Q ss_pred             EEeecCCCCChhhhhhccC-------------CcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCC
Q 003786          548 LIYEYMPNKSLDFFLFDST-------------KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDM  614 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~  614 (795)
                      +++||+++++|..++....             ....+++..+..++.|++.||.|||+.+   |+||||||+||++++++
T Consensus        85 ~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g---i~H~dlkp~Nil~~~~~  161 (283)
T cd05091          85 MIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH---VVHKDLATRNVLVFDKL  161 (283)
T ss_pred             EEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhheEecCCC
Confidence            9999999999998884221             1234778889999999999999999988   99999999999999999


Q ss_pred             CeeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhH
Q 003786          615 NPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHA  693 (795)
Q Consensus       615 ~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~  693 (795)
                      .+||+|||+++...............+++.|+|||.+.+..++.++|||||||++|||++ |..|+......  ..... 
T Consensus       162 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--~~~~~-  238 (283)
T cd05091         162 NVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ--DVIEM-  238 (283)
T ss_pred             ceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHH-
Confidence            999999999886543332222233456789999999988889999999999999999998 77776543221  11111 


Q ss_pred             hhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          694 WDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       694 ~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                         ......         ...+...+..+.+++..||+.+|++||++.+|++.|+.
T Consensus       239 ---i~~~~~---------~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         239 ---IRNRQV---------LPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             ---HHcCCc---------CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence               111111         11122345567899999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=6.1e-37  Score=333.77  Aligned_cols=253  Identities=19%  Similarity=0.295  Sum_probs=201.4

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      ++|++.+.||+|+||.||+++.. +++.||||++.+..   ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM   80 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence            46899999999999999999865 58899999997542   234456889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      ||+++++|.+++...  ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++......
T Consensus        81 e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~lH~~~---i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~  155 (330)
T cd05601          81 EYQPGGDLLSLLNRY--EDQFDEDMAQFYLAELVLAIHSVHQMG---YVHRDIKPENVLIDRTGHIKLADFGSAARLTAN  155 (330)
T ss_pred             CCCCCCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEcccCchHheEECCCCCEEeccCCCCeECCCC
Confidence            999999999998543  245889999999999999999999988   999999999999999999999999999876433


Q ss_pred             cccccccccccccccccccccc------cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCccccc
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQ------QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWE  704 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~------~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  704 (795)
                      ... ......||+.|+|||++.      ...++.++|||||||++|||++|+.||........  ..   ..........
T Consensus       156 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~--~~---~i~~~~~~~~  229 (330)
T cd05601         156 KMV-NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKT--YN---NIMNFQRFLK  229 (330)
T ss_pred             Cce-eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHH--HH---HHHcCCCccC
Confidence            221 223357899999999986      45688999999999999999999999865432111  11   1111111000


Q ss_pred             ccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          705 LIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       705 ~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .       .........+.+++..||+ +|++||++.+++++
T Consensus       230 ~-------~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h  263 (330)
T cd05601         230 F-------PEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH  263 (330)
T ss_pred             C-------CCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence            0       0111234567789999998 99999999999986

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=2e-36  Score=320.01  Aligned_cols=255  Identities=26%  Similarity=0.417  Sum_probs=200.1

Q ss_pred             CccccccCcCCcccEEEeEecC----cceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecce-----
Q 003786          477 FSTENKLGEGGFGPVYKGRLLN----GQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEE-----  545 (795)
Q Consensus       477 ~~~~~~LG~G~~g~Vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-----  545 (795)
                      |++.+.||+|+||.||+|+...    +..||||++....  ....+.+.+|++.++.++||||+++++++.+.+.     
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            5678999999999999998642    3679999986532  2234678999999999999999999998876554     


Q ss_pred             -eeEEeecCCCCChhhhhhccC---CcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecc
Q 003786          546 -KILIYEYMPNKSLDFFLFDST---KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDF  621 (795)
Q Consensus       546 -~~lv~E~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DF  621 (795)
                       .++++||+++++|..++....   ....+++..+..++.|++.||.|||+.+   |+||||||+||++++++.+||+||
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~df  157 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN---FIHRDLAARNCMLREDMTVCVADF  157 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchheEEECCCCeEEECCc
Confidence             689999999999998885432   2346888999999999999999999987   999999999999999999999999


Q ss_pred             ccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCc
Q 003786          622 GMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDD  700 (795)
Q Consensus       622 Gla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~  700 (795)
                      |+++...............++..|+|||.+....++.++|||||||++|||++ |..|+.......  .....    ...
T Consensus       158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~--~~~~~----~~~  231 (273)
T cd05035         158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHE--IYDYL----RHG  231 (273)
T ss_pred             cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHH----HcC
Confidence            99986543332222222345678999999988899999999999999999999 888875432211  11111    011


Q ss_pred             ccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          701 RAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       701 ~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      ..         ...+......+.+++.+||+.+|++||++.|+++.|+.
T Consensus       232 ~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~  271 (273)
T cd05035         232 NR---------LKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLEN  271 (273)
T ss_pred             CC---------CCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence            10         01122344578899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=1.1e-36  Score=330.97  Aligned_cols=247  Identities=23%  Similarity=0.310  Sum_probs=197.0

Q ss_pred             CCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcCCc-ccceeeeeeeecceeeEEe
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHR-NLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~~lv~  550 (795)
                      +|++.+.||+|+||.||+|+.. +++.||||++.+..   ....+.+..|.+++..+.|+ +|+++++++.+.+..++||
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            5888999999999999999865 47889999997532   23456778899999999765 5888999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      ||+++++|..++..   ...+++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||++......
T Consensus        81 E~~~~g~L~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~  154 (324)
T cd05587          81 EYVNGGDLMYHIQQ---VGKFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG  154 (324)
T ss_pred             cCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEEcCCCCEEEeecCcceecCCC
Confidence            99999999988843   345788999999999999999999988   999999999999999999999999998743211


Q ss_pred             cccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccc
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL  710 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l  710 (795)
                      .  .......||+.|+|||++.+..++.++|||||||++|||++|+.||........  .....    ...      .  
T Consensus       155 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~--~~~i~----~~~------~--  218 (324)
T cd05587         155 G--KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDEL--FQSIM----EHN------V--  218 (324)
T ss_pred             C--CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH--HHHHH----cCC------C--
Confidence            1  123345799999999999999999999999999999999999999975432211  11110    000      0  


Q ss_pred             cchhhHHHHHHHHHHHHhhccCCCCCCCCH-----HHHHHH
Q 003786          711 QNEASYLILNRYINVGLLCVQEDAADRPTM-----FEVVSM  746 (795)
Q Consensus       711 ~~~~~~~~~~~l~~li~~cL~~dP~~RPt~-----~evl~~  746 (795)
                        ..+......+.+++.+||+.+|++||+.     .+++++
T Consensus       219 --~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h  257 (324)
T cd05587         219 --SYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREH  257 (324)
T ss_pred             --CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence              0111234467789999999999999976     677665

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=7.7e-37  Score=332.21  Aligned_cols=242  Identities=24%  Similarity=0.278  Sum_probs=194.7

Q ss_pred             cccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCCCC
Q 003786          481 NKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNK  556 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g  556 (795)
                      +.||+|+||.||+++.. +++.||+|++.+..   ......+.+|+++++.++||||+++++++...+..++||||++++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            46999999999999864 68899999997542   223456778999999999999999999999999999999999999


Q ss_pred             ChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHh-cCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccccc
Q 003786          557 SLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ-YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK  635 (795)
Q Consensus       557 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~  635 (795)
                      +|..++..   ...+++..+..++.||+.||.|||+ .+   |+||||||+|||++.++.+||+|||+++......  ..
T Consensus        81 ~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~~~~---ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~--~~  152 (325)
T cd05594          81 ELFFHLSR---ERVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG--AT  152 (325)
T ss_pred             cHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCCCCeEEECCCCCEEEecCCCCeecCCCC--cc
Confidence            99888743   3458899999999999999999997 56   9999999999999999999999999987532221  12


Q ss_pred             ccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhh
Q 003786          636 TKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEAS  715 (795)
Q Consensus       636 ~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~  715 (795)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||........  ....  ......            .+
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~--~~~i--~~~~~~------------~p  216 (325)
T cd05594         153 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL--FELI--LMEEIR------------FP  216 (325)
T ss_pred             cccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHH--HHHH--hcCCCC------------CC
Confidence            2345799999999999999999999999999999999999999865432211  1100  000000            11


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHH
Q 003786          716 YLILNRYINVGLLCVQEDAADRP-----TMFEVVSM  746 (795)
Q Consensus       716 ~~~~~~l~~li~~cL~~dP~~RP-----t~~evl~~  746 (795)
                      ......+.+++.+||+.||++|+     ++.+++++
T Consensus       217 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h  252 (325)
T cd05594         217 RTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH  252 (325)
T ss_pred             CCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence            12234677899999999999996     89999986

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=1.4e-36  Score=342.79  Aligned_cols=262  Identities=18%  Similarity=0.257  Sum_probs=193.8

Q ss_pred             HccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeec--------
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL--------  543 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--------  543 (795)
                      ...+|++.+.||+|+||.||+|... +++.||||++...    .....+|+.+|++++|||||++++++...        
T Consensus        64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~----~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~  139 (440)
T PTZ00036         64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD----PQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN  139 (440)
T ss_pred             cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC----cchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence            3467999999999999999999864 5889999988543    23456799999999999999999886432        


Q ss_pred             ceeeEEeecCCCCChhhhhhc-cCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCC-Ceeeecc
Q 003786          544 EEKILIYEYMPNKSLDFFLFD-STKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDM-NPKISDF  621 (795)
Q Consensus       544 ~~~~lv~E~~~~gsL~~~l~~-~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~-~vkL~DF  621 (795)
                      ...++||||+++ +|..++.. ......+++..+..++.||++||+|||+.+   |+||||||+||||+.++ .+||+||
T Consensus       140 ~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~---IiHrDLKp~NILl~~~~~~vkL~DF  215 (440)
T PTZ00036        140 IFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF---ICHRDLKPQNLLIDPNTHTLKLCDF  215 (440)
T ss_pred             eEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCcCHHHEEEcCCCCceeeecc
Confidence            235689999986 55554432 233456889999999999999999999998   99999999999999665 6999999


Q ss_pred             ccccccCCCccccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCc
Q 003786          622 GMARIFGGDELQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDD  700 (795)
Q Consensus       622 Gla~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~  700 (795)
                      |+++.+....   ......||+.|+|||++.+ ..++.++|||||||++|||++|.+||........ +.. ........
T Consensus       216 Gla~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~-~~~-i~~~~~~p  290 (440)
T PTZ00036        216 GSAKNLLAGQ---RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQ-LVR-IIQVLGTP  290 (440)
T ss_pred             ccchhccCCC---CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH-HHH-HHHHhCCC
Confidence            9998654322   1223578999999998865 4799999999999999999999999876442221 111 10100000


Q ss_pred             c----------ccc-----ccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          701 R----------AWE-----LIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       701 ~----------~~~-----~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                      .          ..+     .....+....+...+..+.+++.+||+.+|++|||+.|++++-
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp  352 (440)
T PTZ00036        291 TEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADP  352 (440)
T ss_pred             CHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCCh
Confidence            0          000     0000111111222345788999999999999999999999863

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=7.9e-37  Score=337.74  Aligned_cols=255  Identities=22%  Similarity=0.261  Sum_probs=201.7

Q ss_pred             HccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeE
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKIL  548 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  548 (795)
                      ..++|++.++||+|+||.||+++.. +++.||+|++.+..   ....+.+.+|+.+++.++||||+++++++.+....++
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l  120 (370)
T cd05596          41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM  120 (370)
T ss_pred             CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence            4578999999999999999999865 58899999986432   2234557889999999999999999999999999999


Q ss_pred             EeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccC
Q 003786          549 IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      ||||+++|+|..++..    ..+++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||++....
T Consensus       121 v~Ey~~gg~L~~~l~~----~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~  193 (370)
T cd05596         121 VMEYMPGGDLVNLMSN----YDIPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMD  193 (370)
T ss_pred             EEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEcCCCCEEEEeccceeecc
Confidence            9999999999998843    24788889999999999999999988   9999999999999999999999999998654


Q ss_pred             CCcccccccccccccccccccccccC----CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCccccc
Q 003786          629 GDELQSKTKRIVGTYGYMSPEYAQQG----LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWE  704 (795)
Q Consensus       629 ~~~~~~~~~~~~gt~~y~APE~~~~~----~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  704 (795)
                      .... .......||+.|+|||++.+.    .++.++|||||||++|||++|+.||........  ..   ..........
T Consensus       194 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~--~~---~i~~~~~~~~  267 (370)
T cd05596         194 ANGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT--YS---KIMDHKNSLT  267 (370)
T ss_pred             CCCc-ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHH--HH---HHHcCCCcCC
Confidence            3221 122345799999999988653    488999999999999999999999875432111  11   1111100000


Q ss_pred             ccCccccchhhHHHHHHHHHHHHhhccCCCCC--CCCHHHHHHHH
Q 003786          705 LIDPTLQNEASYLILNRYINVGLLCVQEDAAD--RPTMFEVVSML  747 (795)
Q Consensus       705 ~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~--RPt~~evl~~L  747 (795)
                      .       ......+..+.+++.+||+.+|++  ||++.|++++.
T Consensus       268 ~-------~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~  305 (370)
T cd05596         268 F-------PDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHP  305 (370)
T ss_pred             C-------CCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCc
Confidence            0       011123456778999999999988  99999999873

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=100.00  E-value=1.6e-36  Score=322.57  Aligned_cols=256  Identities=28%  Similarity=0.432  Sum_probs=203.4

Q ss_pred             cCCccccccCcCCcccEEEeEec------CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeE
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL------NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKIL  548 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  548 (795)
                      .+|...++||+|+||.||+++..      ++..+|+|.+........+.+.+|+++++.++|+||+++++++.+....++
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM   84 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence            56788899999999999999632      356799999876665666789999999999999999999999999999999


Q ss_pred             EeecCCCCChhhhhhccCC------------cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCe
Q 003786          549 IYEYMPNKSLDFFLFDSTK------------ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNP  616 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~v  616 (795)
                      +|||+++++|.+++.....            ...+++..+..++.||+.||+|||+.+   |+||||||+|||+++++.+
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~nil~~~~~~~  161 (280)
T cd05092          85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH---FVHRDLATRNCLVGQGLVV  161 (280)
T ss_pred             EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC---eecccccHhhEEEcCCCCE
Confidence            9999999999999864321            134788899999999999999999988   9999999999999999999


Q ss_pred             eeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhh
Q 003786          617 KISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWD  695 (795)
Q Consensus       617 kL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~  695 (795)
                      ||+|||++................+++.|+|||.+.+..++.++|||||||++|||++ |..|+........  ....  
T Consensus       162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~--~~~~--  237 (280)
T cd05092         162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEA--IECI--  237 (280)
T ss_pred             EECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHH--HHHH--
Confidence            9999999976543322222223345788999999998899999999999999999998 8888753322111  1100  


Q ss_pred             hccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHc
Q 003786          696 LWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT  748 (795)
Q Consensus       696 ~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~  748 (795)
                        ......         ..+...+..+.+++.+||+.+|++||++.||++.|+
T Consensus       238 --~~~~~~---------~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~  279 (280)
T cd05092         238 --TQGREL---------ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ  279 (280)
T ss_pred             --HcCccC---------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence              000000         011123356789999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=100.00  E-value=2e-36  Score=321.27  Aligned_cols=258  Identities=28%  Similarity=0.404  Sum_probs=202.5

Q ss_pred             HccCCccccccCcCCcccEEEeEecC------cceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecce
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLLN------GQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEE  545 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  545 (795)
                      ..++|++.+.||+|+||.||+|....      +..||+|.+.... ......+.+|+.++++++|+||+++++++.+...
T Consensus         4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   83 (277)
T cd05036           4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP   83 (277)
T ss_pred             CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence            34679999999999999999998653      5678999886433 2334578999999999999999999999999999


Q ss_pred             eeEEeecCCCCChhhhhhccCC----cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCC---Ceee
Q 003786          546 KILIYEYMPNKSLDFFLFDSTK----ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDM---NPKI  618 (795)
Q Consensus       546 ~~lv~E~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~---~vkL  618 (795)
                      .++||||+++++|.+++.....    ...+++..+..++.||+.||+|||+.+   ++||||||+||+++.++   .+||
T Consensus        84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~nil~~~~~~~~~~kl  160 (277)
T cd05036          84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH---FIHRDIAARNCLLTCKGPGRVAKI  160 (277)
T ss_pred             cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchheEEEeccCCCcceEe
Confidence            9999999999999998854321    135888999999999999999999988   99999999999998765   5999


Q ss_pred             eccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhc
Q 003786          619 SDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLW  697 (795)
Q Consensus       619 ~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~  697 (795)
                      +|||+++................+..|+|||++.+..++.++|||||||++|||++ |..||+.......  ....    
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~--~~~~----  234 (277)
T cd05036         161 ADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEV--MEFV----  234 (277)
T ss_pred             ccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH--HHHH----
Confidence            99999987643322222222334568999999998899999999999999999997 8888865432221  1111    


Q ss_pred             cCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHc
Q 003786          698 KDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT  748 (795)
Q Consensus       698 ~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~  748 (795)
                      .....         ...+...+..+.+++.+||+.+|++||++.+|+++|.
T Consensus       235 ~~~~~---------~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         235 TGGGR---------LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             HcCCc---------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence            00000         0111223457789999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=1.7e-36  Score=324.01  Aligned_cols=257  Identities=29%  Similarity=0.422  Sum_probs=201.8

Q ss_pred             CCccccccCcCCcccEEEeEec------CcceEEEEEecccCc-cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeE
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL------NGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKIL  548 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  548 (795)
                      +|++.+.||+|+||.||+|+..      ....+++|.+..... ...+.+.+|+.+++.++||||+++++.+...+..++
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   80 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL   80 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence            4788899999999999999753      235688988865432 234678899999999999999999999999999999


Q ss_pred             EeecCCCCChhhhhhccC---------------------CcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCc
Q 003786          549 IYEYMPNKSLDFFLFDST---------------------KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASN  607 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~---------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~N  607 (795)
                      ++||+++++|.+++....                     ....+++..+..++.|++.||.|||+.+   |+||||||+|
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---ivH~dikp~n  157 (290)
T cd05045          81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK---LVHRDLAARN  157 (290)
T ss_pred             EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC---eehhhhhhhe
Confidence            999999999999875321                     1234778889999999999999999987   9999999999


Q ss_pred             EEECCCCCeeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcc
Q 003786          608 ILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNS  686 (795)
Q Consensus       608 Ill~~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~  686 (795)
                      ||+++++.+||+|||+++...............++..|+|||.+.+..++.++||||||++++||++ |..|++......
T Consensus       158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~  237 (290)
T cd05045         158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPER  237 (290)
T ss_pred             EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence            9999999999999999986533222122223446778999999988889999999999999999998 888886433221


Q ss_pred             hhHhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          687 LTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       687 ~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                        +..    ......         ....+......+.+++.+||+.+|++||++.|+++.|+..
T Consensus       238 --~~~----~~~~~~---------~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~  286 (290)
T cd05045         238 --LFN----LLKTGY---------RMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKM  286 (290)
T ss_pred             --HHH----HHhCCC---------CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHH
Confidence              111    111110         0111122345788999999999999999999999999763

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=1.8e-36  Score=328.76  Aligned_cols=242  Identities=23%  Similarity=0.324  Sum_probs=194.7

Q ss_pred             cccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhc-CCcccceeeeeeeecceeeEEeecCCC
Q 003786          481 NKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEEKILIYEYMPN  555 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~  555 (795)
                      ++||+|+||.||+|+.. +++.||||++.+..   ....+.+..|.+++..+ +||||+++++++.+.+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            46999999999999865 47899999987542   23345677899998866 799999999999999999999999999


Q ss_pred             CChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccccc
Q 003786          556 KSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK  635 (795)
Q Consensus       556 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~  635 (795)
                      ++|...+..   ...+++..+..++.||++||.|||+++   |+||||||+|||++.++.+||+|||++.......  ..
T Consensus        81 ~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~--~~  152 (321)
T cd05591          81 GDLMFQIQR---SRKFDEPRSRFYAAEVTLALMFLHRHG---VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG--VT  152 (321)
T ss_pred             CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeecccceecccCC--cc
Confidence            999888843   345788999999999999999999998   9999999999999999999999999987543222  12


Q ss_pred             ccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhh
Q 003786          636 TKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEAS  715 (795)
Q Consensus       636 ~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~  715 (795)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||........  ....   ....    ..       .+
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~--~~~i---~~~~----~~-------~p  216 (321)
T cd05591         153 TTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDL--FESI---LHDD----VL-------YP  216 (321)
T ss_pred             ccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHH--HHHH---HcCC----CC-------CC
Confidence            3345799999999999999999999999999999999999999975442221  1111   0100    00       11


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCC-------CHHHHHHH
Q 003786          716 YLILNRYINVGLLCVQEDAADRP-------TMFEVVSM  746 (795)
Q Consensus       716 ~~~~~~l~~li~~cL~~dP~~RP-------t~~evl~~  746 (795)
                      ......+.+++.+||+.+|++||       ++.+++++
T Consensus       217 ~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h  254 (321)
T cd05591         217 VWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH  254 (321)
T ss_pred             CCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence            11235677899999999999999       88899876

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=100.00  E-value=1e-36  Score=326.00  Aligned_cols=259  Identities=28%  Similarity=0.401  Sum_probs=205.2

Q ss_pred             HccCCccccccCcCCcccEEEeEecC------cceEEEEEecccC-ccchHHHHHHHHHHHhc-CCcccceeeeeeeecc
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLLN------GQEVAVKRLSSQS-GQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELE  544 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~  544 (795)
                      ..++|++.+.||+|+||.||++....      ...+|+|.+.... .....++.+|+++++++ +||||+++++++....
T Consensus        10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~   89 (293)
T cd05053          10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG   89 (293)
T ss_pred             CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC
Confidence            34678999999999999999997532      3679999987532 23345688999999999 7999999999999999


Q ss_pred             eeeEEeecCCCCChhhhhhcc-------------CCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEEC
Q 003786          545 EKILIYEYMPNKSLDFFLFDS-------------TKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLD  611 (795)
Q Consensus       545 ~~~lv~E~~~~gsL~~~l~~~-------------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~  611 (795)
                      ..+++|||+++++|..++...             .....+++..+..++.|++.||.|||+.+   |+||||||+||+++
T Consensus        90 ~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~Nil~~  166 (293)
T cd05053          90 PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK---CIHRDLAARNVLVT  166 (293)
T ss_pred             CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---ccccccceeeEEEc
Confidence            999999999999999998542             22345888899999999999999999987   99999999999999


Q ss_pred             CCCCeeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHh
Q 003786          612 KDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLL  690 (795)
Q Consensus       612 ~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~  690 (795)
                      .++.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |..|+........  .
T Consensus       167 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~--~  244 (293)
T cd05053         167 EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEEL--F  244 (293)
T ss_pred             CCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHH--H
Confidence            999999999999987654332222223345678999999988899999999999999999997 8888764332211  1


Q ss_pred             HhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          691 GHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       691 ~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      .    .......         ...+......+.+++.+|++.+|++|||+.|+++.|+.
T Consensus       245 ~----~~~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~  290 (293)
T cd05053         245 K----LLKEGYR---------MEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDR  290 (293)
T ss_pred             H----HHHcCCc---------CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHH
Confidence            1    1111110         01112234567899999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=2.2e-36  Score=319.68  Aligned_cols=255  Identities=25%  Similarity=0.416  Sum_probs=197.0

Q ss_pred             CccccccCcCCcccEEEeEecC-cc--eEEEEEeccc--CccchHHHHHHHHHHHhcCCcccceeeeeeeec------ce
Q 003786          477 FSTENKLGEGGFGPVYKGRLLN-GQ--EVAVKRLSSQ--SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL------EE  545 (795)
Q Consensus       477 ~~~~~~LG~G~~g~Vy~~~~~~-~~--~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~  545 (795)
                      |.+.++||+|+||.||+|+... ++  .+|+|.+...  .....+.+.+|++++++++||||+++++++...      ..
T Consensus         1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   80 (272)
T cd05075           1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS   80 (272)
T ss_pred             CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence            3567899999999999998654 32  5899988653  233456788999999999999999999987532      24


Q ss_pred             eeEEeecCCCCChhhhhhccC---CcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccc
Q 003786          546 KILIYEYMPNKSLDFFLFDST---KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFG  622 (795)
Q Consensus       546 ~~lv~E~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFG  622 (795)
                      .+++|||+++++|..++....   ....+++..+..++.||+.||+|||+++   |+||||||+|||+++++.+||+|||
T Consensus        81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg  157 (272)
T cd05075          81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS---FIHRDLAARNCMLNENMNVCVADFG  157 (272)
T ss_pred             cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhheEEcCCCCEEECCCC
Confidence            689999999999988874321   2345889999999999999999999987   9999999999999999999999999


Q ss_pred             cccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcc
Q 003786          623 MARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDR  701 (795)
Q Consensus       623 la~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~  701 (795)
                      +++...............+++.|+|||.+.+..++.++|||||||++|||++ |..|+.......  ...    ......
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~~----~~~~~~  231 (272)
T cd05075         158 LSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSE--IYD----YLRQGN  231 (272)
T ss_pred             cccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHH--HHH----HHHcCC
Confidence            9987643332222223346778999999999999999999999999999999 788876432211  111    111111


Q ss_pred             cccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          702 AWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       702 ~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      ...         ........+.+++.+||+.+|++|||+.+|++.|+.
T Consensus       232 ~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~  270 (272)
T cd05075         232 RLK---------QPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEK  270 (272)
T ss_pred             CCC---------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence            100         111234567899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=1.8e-36  Score=328.52  Aligned_cols=242  Identities=24%  Similarity=0.350  Sum_probs=193.9

Q ss_pred             cccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhc-CCcccceeeeeeeecceeeEEeecCCC
Q 003786          481 NKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEEKILIYEYMPN  555 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~  555 (795)
                      +.||+|+||.||+|+.. +++.||||++.+..   ....+.+..|..++..+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            46999999999999865 58899999986532   23445677888888876 699999999999999999999999999


Q ss_pred             CChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccccc
Q 003786          556 KSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK  635 (795)
Q Consensus       556 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~  635 (795)
                      ++|..++..   ...+++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++......  ..
T Consensus        81 g~L~~~i~~---~~~l~~~~~~~~~~ql~~~L~~lH~~~---ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~--~~  152 (320)
T cd05590          81 GDLMFHIQK---SRRFDEARARFYAAEITSALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG--KT  152 (320)
T ss_pred             chHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC--Cc
Confidence            999888843   345889999999999999999999988   9999999999999999999999999987532221  12


Q ss_pred             ccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhh
Q 003786          636 TKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEAS  715 (795)
Q Consensus       636 ~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~  715 (795)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||........  ...    ......   .       .+
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~--~~~----i~~~~~---~-------~~  216 (320)
T cd05590         153 TSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDL--FEA----ILNDEV---V-------YP  216 (320)
T ss_pred             ccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHH--HHH----HhcCCC---C-------CC
Confidence            3345799999999999999999999999999999999999999975442221  111    011100   0       11


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCH------HHHHHH
Q 003786          716 YLILNRYINVGLLCVQEDAADRPTM------FEVVSM  746 (795)
Q Consensus       716 ~~~~~~l~~li~~cL~~dP~~RPt~------~evl~~  746 (795)
                      ......+.+++.+||+.||++||++      ++++++
T Consensus       217 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h  253 (320)
T cd05590         217 TWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRH  253 (320)
T ss_pred             CCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcC
Confidence            1234567889999999999999998      677765

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=1.9e-36  Score=329.63  Aligned_cols=248  Identities=21%  Similarity=0.293  Sum_probs=194.0

Q ss_pred             cccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhc-CCcccceeeeeeeecceeeEEeecCCC
Q 003786          481 NKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEEKILIYEYMPN  555 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~  555 (795)
                      +.||+|+||.||+++.. +++.||+|++.+..   ......+.+|+.++.++ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            46999999999999865 57899999997642   22345677899988877 799999999999999999999999999


Q ss_pred             CChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccccc
Q 003786          556 KSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK  635 (795)
Q Consensus       556 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~  635 (795)
                      ++|..++..   ...+++..+..++.||+.||.|||+++   |+||||||+||+++.++.+||+|||+++......  ..
T Consensus        81 ~~L~~~~~~---~~~l~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~--~~  152 (329)
T cd05618          81 GDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG--DT  152 (329)
T ss_pred             CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCCEEEeeCCccccccCCC--Cc
Confidence            999888743   345889999999999999999999998   9999999999999999999999999987532211  12


Q ss_pred             ccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcc---hhHhHhHhhhccCcccccccCccccc
Q 003786          636 TKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNS---LTLLGHAWDLWKDDRAWELIDPTLQN  712 (795)
Q Consensus       636 ~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~id~~l~~  712 (795)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||.......   ...............          .
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~----------~  222 (329)
T cd05618         153 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ----------I  222 (329)
T ss_pred             cccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCC----------C
Confidence            234679999999999999999999999999999999999999996422111   111111111111110          0


Q ss_pred             hhhHHHHHHHHHHHHhhccCCCCCCCC------HHHHHHH
Q 003786          713 EASYLILNRYINVGLLCVQEDAADRPT------MFEVVSM  746 (795)
Q Consensus       713 ~~~~~~~~~l~~li~~cL~~dP~~RPt------~~evl~~  746 (795)
                      ..+......+.+++.+||+.||++||+      +.+++++
T Consensus       223 ~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h  262 (329)
T cd05618         223 RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH  262 (329)
T ss_pred             CCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence            112223456778999999999999998      5687765

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=1.6e-36  Score=329.53  Aligned_cols=247  Identities=23%  Similarity=0.312  Sum_probs=196.8

Q ss_pred             CCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhc-CCcccceeeeeeeecceeeEEe
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      +|++.+.||+|+||.||+|+.. +++.||||++.+..   ....+.+..|..++..+ +|++|+++++++.+.+..++||
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            5888999999999999999865 47889999987542   22334567788888777 5899999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      ||+++|+|...+..   ...+++..+..++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+++.....
T Consensus        81 E~~~~g~L~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~  154 (323)
T cd05616          81 EYVNGGDLMYQIQQ---VGRFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD  154 (323)
T ss_pred             cCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEecCCCHHHeEECCCCcEEEccCCCceecCCC
Confidence            99999999888843   345888999999999999999999988   999999999999999999999999999754322


Q ss_pred             cccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccc
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL  710 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l  710 (795)
                      .  .......||+.|+|||++.+..++.++|||||||++|||++|+.||........  .....    ....        
T Consensus       155 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~--~~~i~----~~~~--------  218 (323)
T cd05616         155 G--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL--FQSIM----EHNV--------  218 (323)
T ss_pred             C--CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHH--HHHHH----hCCC--------
Confidence            1  122346799999999999999999999999999999999999999975432211  11110    0000        


Q ss_pred             cchhhHHHHHHHHHHHHhhccCCCCCCCCH-----HHHHHH
Q 003786          711 QNEASYLILNRYINVGLLCVQEDAADRPTM-----FEVVSM  746 (795)
Q Consensus       711 ~~~~~~~~~~~l~~li~~cL~~dP~~RPt~-----~evl~~  746 (795)
                        ..+......+.+++.+||+.+|++|++.     .+++++
T Consensus       219 --~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h  257 (323)
T cd05616         219 --AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH  257 (323)
T ss_pred             --CCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcC
Confidence              0111234567889999999999999984     677654

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=6.7e-36  Score=315.08  Aligned_cols=259  Identities=25%  Similarity=0.386  Sum_probs=207.7

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      ++|++.+.||+|+||.||+|+.. +++.||||.+....   ......+.+|+++++.++||||+++++++.+.+..++|+
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL   81 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence            57899999999999999999864 68999999875432   223456889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccC-CcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          551 EYMPNKSLDFFLFDST-KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      ||+++++|..++.... ....+++..+..++.||++||.|||+.+   ++|+||||+||+++.++.++|+|||++.....
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~  158 (267)
T cd08228          82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence            9999999988875432 2345788899999999999999999987   99999999999999999999999999887643


Q ss_pred             CcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcc
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT  709 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~  709 (795)
                      ...  ......|++.|+|||.+.+..++.++|+||||+++|||++|+.|+..............    ....     .+ 
T Consensus       159 ~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~----~~~~-----~~-  226 (267)
T cd08228         159 KTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKI----EQCD-----YP-  226 (267)
T ss_pred             hhH--HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHH----hcCC-----CC-
Confidence            321  12235688999999999888899999999999999999999999854332222221111    0000     00 


Q ss_pred             ccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          710 LQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       710 l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                        ..........+.+++.+||+.+|++||++.+|++.|.+.
T Consensus       227 --~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~  265 (267)
T cd08228         227 --PLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM  265 (267)
T ss_pred             --CCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence              111223446788999999999999999999999998763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.8e-36  Score=321.29  Aligned_cols=257  Identities=27%  Similarity=0.425  Sum_probs=204.8

Q ss_pred             ccCCccccccCcCCcccEEEeEecC------cceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeeccee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLN------GQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEK  546 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  546 (795)
                      .++|++.+.||+|+||.||+|....      +..||+|.+.... ......+.+|+.+++.++||||+++++++......
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~   84 (277)
T cd05032           5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT   84 (277)
T ss_pred             hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence            3678899999999999999997542      4679999986543 23345788999999999999999999999999999


Q ss_pred             eEEeecCCCCChhhhhhccCC-------cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeee
Q 003786          547 ILIYEYMPNKSLDFFLFDSTK-------ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKIS  619 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~  619 (795)
                      ++||||+++++|..++.....       ...+++..+..++.||+.||.|||+.+   |+||||||+||+++.++.+||+
T Consensus        85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~di~p~nill~~~~~~kl~  161 (277)
T cd05032          85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK---FVHRDLAARNCMVAEDLTVKIG  161 (277)
T ss_pred             EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccChheEEEcCCCCEEEC
Confidence            999999999999999854322       234678889999999999999999987   9999999999999999999999


Q ss_pred             ccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhcc
Q 003786          620 DFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWK  698 (795)
Q Consensus       620 DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~  698 (795)
                      |||+++...............++..|+|||.+.+..++.++|||||||++|||++ |..|+........  ....    .
T Consensus       162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~--~~~~----~  235 (277)
T cd05032         162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEV--LKFV----I  235 (277)
T ss_pred             CcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHH--HHHH----h
Confidence            9999986544332222333456789999999988889999999999999999998 8888764332211  1111    1


Q ss_pred             CcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHc
Q 003786          699 DDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT  748 (795)
Q Consensus       699 ~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~  748 (795)
                      ......         .+...+..+.+++.+||+.+|++|||+.++++.|+
T Consensus       236 ~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~  276 (277)
T cd05032         236 DGGHLD---------LPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK  276 (277)
T ss_pred             cCCCCC---------CCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence            111111         11112567889999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=2e-36  Score=329.46  Aligned_cols=248  Identities=20%  Similarity=0.276  Sum_probs=195.1

Q ss_pred             cccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhc-CCcccceeeeeeeecceeeEEeecCCC
Q 003786          481 NKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEEKILIYEYMPN  555 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~  555 (795)
                      +.||+|+||.||+++.. +++.||||++.+..   ......+.+|..++.++ +||||+++++++.+.+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            46999999999999865 58899999997542   23345678899999988 799999999999999999999999999


Q ss_pred             CChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccccc
Q 003786          556 KSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK  635 (795)
Q Consensus       556 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~  635 (795)
                      ++|..++..   .+.+++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++......  ..
T Consensus        81 g~L~~~~~~---~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~--~~  152 (329)
T cd05588          81 GDLMFHMQR---QRKLPEEHARFYSAEISLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPG--DT  152 (329)
T ss_pred             CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEECcCccccccccCC--Cc
Confidence            999888743   345899999999999999999999998   9999999999999999999999999987422111  12


Q ss_pred             ccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcc---hhHhHhHhhhccCcccccccCccccc
Q 003786          636 TKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNS---LTLLGHAWDLWKDDRAWELIDPTLQN  712 (795)
Q Consensus       636 ~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~id~~l~~  712 (795)
                      .....||+.|+|||++.+..++.++|||||||++|+|++|+.||+......   ................          
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~----------  222 (329)
T cd05588         153 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQI----------  222 (329)
T ss_pred             cccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCC----------
Confidence            334679999999999999999999999999999999999999997432111   1001111111111100          


Q ss_pred             hhhHHHHHHHHHHHHhhccCCCCCCCC------HHHHHHH
Q 003786          713 EASYLILNRYINVGLLCVQEDAADRPT------MFEVVSM  746 (795)
Q Consensus       713 ~~~~~~~~~l~~li~~cL~~dP~~RPt------~~evl~~  746 (795)
                      ..+......+.+++.+||+.||++||+      +.+++++
T Consensus       223 ~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h  262 (329)
T cd05588         223 RIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH  262 (329)
T ss_pred             CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence            011123456788999999999999997      6788875

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=3.8e-37  Score=300.18  Aligned_cols=253  Identities=27%  Similarity=0.359  Sum_probs=204.3

Q ss_pred             HccCCccccccCcCCcccEEEeEe-cCcceEEEEEecccC----ccch----HHHHHHHHHHHhc-CCcccceeeeeeee
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQS----GQGQ----EEFKNEIKLIAKL-QHRNLVRLLGCCIE  542 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~----~~~~~E~~~l~~l-~h~niv~l~~~~~~  542 (795)
                      ...+|...+.||.|..++|-++-+ ++++++|+|++....    .+..    +.-.+|+.||+++ -||+|+++.++++.
T Consensus        15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes   94 (411)
T KOG0599|consen   15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES   94 (411)
T ss_pred             HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC
Confidence            346788889999999999998865 468999999885421    1122    3455799999998 59999999999999


Q ss_pred             cceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccc
Q 003786          543 LEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFG  622 (795)
Q Consensus       543 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFG  622 (795)
                      +.-.++|+|.|+.|.|.++|   ...-.+++.+..+|+.|+..|+.|||..+   ||||||||+|||++++.++||+|||
T Consensus        95 ~sF~FlVFdl~prGELFDyL---ts~VtlSEK~tR~iMrqlfegVeylHa~~---IVHRDLKpENILlddn~~i~isDFG  168 (411)
T KOG0599|consen   95 DAFVFLVFDLMPRGELFDYL---TSKVTLSEKETRRIMRQLFEGVEYLHARN---IVHRDLKPENILLDDNMNIKISDFG  168 (411)
T ss_pred             cchhhhhhhhcccchHHHHh---hhheeecHHHHHHHHHHHHHHHHHHHHhh---hhhcccChhheeeccccceEEeccc
Confidence            99999999999999999999   34456899999999999999999999988   9999999999999999999999999


Q ss_pred             cccccCCCccccccccccccccccccccccc------CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhh
Q 003786          623 MARIFGGDELQSKTKRIVGTYGYMSPEYAQQ------GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDL  696 (795)
Q Consensus       623 la~~~~~~~~~~~~~~~~gt~~y~APE~~~~------~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~  696 (795)
                      ++..+....   .....+|||+|+|||.++.      ..|+..+|+|++|||+|.|+.|.+||--.  .++..+..    
T Consensus       169 Fa~~l~~Ge---kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR--kQmlMLR~----  239 (411)
T KOG0599|consen  169 FACQLEPGE---KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR--KQMLMLRM----  239 (411)
T ss_pred             eeeccCCch---hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHH--HHHHHHHH----
Confidence            999876554   3445899999999998853      46889999999999999999999997421  11111111    


Q ss_pred             ccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          697 WKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       697 ~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ..++..      .+..+...+......++|.+||+.||.+|.|++|+|+|
T Consensus       240 ImeGky------qF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH  283 (411)
T KOG0599|consen  240 IMEGKY------QFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAH  283 (411)
T ss_pred             HHhccc------ccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence            111111      12233445566778899999999999999999999986

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=4.4e-36  Score=315.89  Aligned_cols=254  Identities=29%  Similarity=0.430  Sum_probs=202.7

Q ss_pred             ccCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecC
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYM  553 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  553 (795)
                      .++|++.++||+|+||.||+|+..+...||+|++.... ...+.+.+|++++++++||||+++++++. ....++||||+
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~   82 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYM   82 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcC
Confidence            35799999999999999999988777789999997533 34567899999999999999999999874 45679999999


Q ss_pred             CCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccc
Q 003786          554 PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ  633 (795)
Q Consensus       554 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~  633 (795)
                      ++++|.+++... ....+++..+..++.|+++||+|||+.+   |+||||||+||+++.++.+||+|||++.........
T Consensus        83 ~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~  158 (262)
T cd05071          83 SKGSLLDFLKGE-MGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT  158 (262)
T ss_pred             CCCcHHHHHhhc-cccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcccEEEcCCCcEEeccCCceeeccccccc
Confidence            999999998543 2345788999999999999999999988   999999999999999999999999999866433221


Q ss_pred             ccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCccccc
Q 003786          634 SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQN  712 (795)
Q Consensus       634 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~  712 (795)
                       ......++..|+|||.+.+..++.++|||||||++|||++ |..|++.......  ....    ....         ..
T Consensus       159 -~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~--~~~~----~~~~---------~~  222 (262)
T cd05071         159 -ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV--LDQV----ERGY---------RM  222 (262)
T ss_pred             -cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHH--HHHH----hcCC---------CC
Confidence             1122346778999999988899999999999999999999 7777754332111  1100    0000         00


Q ss_pred             hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          713 EASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       713 ~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      ......+..+.+++.+|++.+|++||++.+++++|+.
T Consensus       223 ~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~  259 (262)
T cd05071         223 PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED  259 (262)
T ss_pred             CCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence            1122345677899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=1.7e-36  Score=334.76  Aligned_cols=256  Identities=21%  Similarity=0.251  Sum_probs=200.2

Q ss_pred             HHccCCccccccCcCCcccEEEeEec-CcceEEEEEeccc---CccchHHHHHHHHHHHhcCCcccceeeeeeeecceee
Q 003786          472 AATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQ---SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKI  547 (795)
Q Consensus       472 ~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  547 (795)
                      ...++|++.+.||+|+||.||+++.. +++.+|+|++.+.   .....+.+.+|+.+++.++||||+++++++.+++..+
T Consensus        40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~  119 (370)
T cd05621          40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLY  119 (370)
T ss_pred             CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEE
Confidence            34578999999999999999999875 4788999998642   1223456889999999999999999999999999999


Q ss_pred             EEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccccc
Q 003786          548 LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF  627 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~  627 (795)
                      +||||+++|+|.+++..    ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++...
T Consensus       120 lv~Ey~~gg~L~~~l~~----~~~~~~~~~~~~~qil~aL~~LH~~~---IvHrDLKp~NILl~~~~~~kL~DFG~a~~~  192 (370)
T cd05621         120 MVMEYMPGGDLVNLMSN----YDVPEKWAKFYTAEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMKM  192 (370)
T ss_pred             EEEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEEecccceec
Confidence            99999999999998843    24788899999999999999999988   999999999999999999999999999876


Q ss_pred             CCCcccccccccccccccccccccccC----CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccc
Q 003786          628 GGDELQSKTKRIVGTYGYMSPEYAQQG----LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAW  703 (795)
Q Consensus       628 ~~~~~~~~~~~~~gt~~y~APE~~~~~----~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~  703 (795)
                      ..... .......||+.|+|||++.+.    .++.++|||||||++|||++|+.||........  .   ..........
T Consensus       193 ~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~--~---~~i~~~~~~~  266 (370)
T cd05621         193 DETGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGT--Y---SKIMDHKNSL  266 (370)
T ss_pred             ccCCc-eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHH--H---HHHHhCCccc
Confidence            43221 122346799999999998653    378999999999999999999999975432111  1   0111110000


Q ss_pred             cccCccccchhhHHHHHHHHHHHHhhccCCCCC--CCCHHHHHHHH
Q 003786          704 ELIDPTLQNEASYLILNRYINVGLLCVQEDAAD--RPTMFEVVSML  747 (795)
Q Consensus       704 ~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~--RPt~~evl~~L  747 (795)
                      ..       .........+.+++..||+.+|.+  ||++.|++++-
T Consensus       267 ~~-------p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp  305 (370)
T cd05621         267 NF-------PEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHP  305 (370)
T ss_pred             CC-------CCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCc
Confidence            00       011123456678889999866654  89999999973

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=100.00  E-value=4.4e-36  Score=315.36  Aligned_cols=254  Identities=31%  Similarity=0.452  Sum_probs=202.8

Q ss_pred             ccCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecC
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYM  553 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  553 (795)
                      .++|++.++||+|+||.||+|...++..+|+|.+.... ...+.+.+|+.++++++|+|++++++++. ....+++|||+
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~   82 (260)
T cd05070           5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGT-MSPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYM   82 (260)
T ss_pred             hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCC-CCHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEec
Confidence            35789999999999999999998888899999986543 34567999999999999999999999875 45689999999


Q ss_pred             CCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccc
Q 003786          554 PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ  633 (795)
Q Consensus       554 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~  633 (795)
                      ++++|.+++.... ...+++..+..++.|++.||.|||+.+   |+||||||+||++++++.+||+|||++.........
T Consensus        83 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~  158 (260)
T cd05070          83 SKGSLLDFLKDGE-GRALKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYT  158 (260)
T ss_pred             CCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEEeCCceEEeCCceeeeeccCcccc
Confidence            9999999885432 334788999999999999999999988   999999999999999999999999999865432211


Q ss_pred             ccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCccccc
Q 003786          634 SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQN  712 (795)
Q Consensus       634 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~  712 (795)
                       ......++..|+|||.+.+..++.++||||||+++|+|++ |..|+.......  .....    ...         ...
T Consensus       159 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~--~~~~~----~~~---------~~~  222 (260)
T cd05070         159 -ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE--VLEQV----ERG---------YRM  222 (260)
T ss_pred             -cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHH--HHHHH----HcC---------CCC
Confidence             1112345678999999988889999999999999999999 888875432211  11111    000         001


Q ss_pred             hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          713 EASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       713 ~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      ..+...+..+.+++.+|++.+|++|||+.++++.|+.
T Consensus       223 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         223 PCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             CCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            1122334568899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=100.00  E-value=7.9e-37  Score=325.11  Aligned_cols=264  Identities=28%  Similarity=0.426  Sum_probs=217.2

Q ss_pred             ccCCccccccCcCCcccEEEeEecCcceEEEEEecccCccc-hHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQG-QEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      .....++++||+|-||.|.++....+..||||+++...... ..+|.+|+++|.+|+|||||+++++|..++.+++|+||
T Consensus       537 Rs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EY  616 (807)
T KOG1094|consen  537 RSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEY  616 (807)
T ss_pred             hhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHH
Confidence            35567889999999999999998778999999998765444 47899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      |++|+|..++..+.... +.-....+|+.||+.|++||.+.+   +|||||.++|+|++.++++||+|||+++-+...+.
T Consensus       617 mEnGDLnqFl~aheapt-~~t~~~vsi~tqiasgmaYLes~n---fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~y  692 (807)
T KOG1094|consen  617 MENGDLNQFLSAHELPT-AETAPGVSICTQIASGMAYLESLN---FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDY  692 (807)
T ss_pred             HhcCcHHHHHHhccCcc-cccchhHHHHHHHHHHHHHHHhhc---hhhccccccceeecCcccEEecCcccccccccCCc
Confidence            99999999997654433 455667789999999999999987   99999999999999999999999999997665555


Q ss_pred             cccccccccccccccccccccCCCCcccchhhHHHHHHHHHh--CCCCCCCCCCcchhHhHhHhhhccCcccccccCccc
Q 003786          633 QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS--SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL  710 (795)
Q Consensus       633 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt--G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l  710 (795)
                      .....+.+-...|||||.+.-+.++.++|||+||+++||+++  ...|++.  ....+.+.........+....      
T Consensus       693 y~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~--lt~e~vven~~~~~~~~~~~~------  764 (807)
T KOG1094|consen  693 YRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQ--LTDEQVVENAGEFFRDQGRQV------  764 (807)
T ss_pred             eeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhh--hhHHHHHHhhhhhcCCCCcce------
Confidence            555555667889999999999999999999999999999875  4555543  333333444444433333222      


Q ss_pred             cchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       711 ~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      ....+..++..+.+++..|+..+-++||+++++..+|..
T Consensus       765 ~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~  803 (807)
T KOG1094|consen  765 VLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQE  803 (807)
T ss_pred             eccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHH
Confidence            122344566788899999999999999999999998865

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=2.8e-36  Score=320.44  Aligned_cols=255  Identities=28%  Similarity=0.374  Sum_probs=198.4

Q ss_pred             cCCccccccCcCCcccEEEeEec-Ccc----eEEEEEecccCc-cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeE
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQ----EVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKIL  548 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  548 (795)
                      ++|++.+.||+|+||.||+|+.. +++    .+++|.+..... ....++..|+.++++++||||+++++++. ....++
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~   85 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQL   85 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEE
Confidence            57888999999999999999864 344    477787754322 23356788888999999999999999875 455789


Q ss_pred             EeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccC
Q 003786          549 IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      ++||+++|+|.+++...  ...+++..+..++.||+.||.|||+.+   ++||||||+||+++.++.+||+|||+++...
T Consensus        86 i~e~~~~gsL~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~  160 (279)
T cd05111          86 VTQLSPLGSLLDHVRQH--RDSLDPQRLLNWCVQIAKGMYYLEEHR---MVHRNLAARNILLKSDSIVQIADFGVADLLY  160 (279)
T ss_pred             EEEeCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEEcCCccceecc
Confidence            99999999999998542  245889999999999999999999988   9999999999999999999999999998654


Q ss_pred             CCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccC
Q 003786          629 GDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID  707 (795)
Q Consensus       629 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id  707 (795)
                      ............++..|+|||.+.+..++.++|||||||++|||++ |..|+........  .    .........  ..
T Consensus       161 ~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~--~----~~~~~~~~~--~~  232 (279)
T cd05111         161 PDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEV--P----DLLEKGERL--AQ  232 (279)
T ss_pred             CCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH--H----HHHHCCCcC--CC
Confidence            3332222334557789999999988899999999999999999998 9888865432211  1    111111110  01


Q ss_pred             ccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          708 PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       708 ~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                      +.       .....+.+++.+|++.+|++||++.|+++.|...
T Consensus       233 ~~-------~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~  268 (279)
T cd05111         233 PQ-------ICTIDVYMVMVKCWMIDENVRPTFKELANEFTRM  268 (279)
T ss_pred             CC-------CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence            11       1234567889999999999999999999998773

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=100.00  E-value=1.1e-35  Score=313.10  Aligned_cols=259  Identities=25%  Similarity=0.383  Sum_probs=208.7

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      ++|++.+.||+|+||.||+|... +++.||+|.++...   ....+.+.+|++++++++|+||+++++++.+.+..++||
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~   81 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL   81 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            57999999999999999999876 68999999886422   233567889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccC-CcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          551 EYMPNKSLDFFLFDST-KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      ||+++++|..++.... ....+++..+..++.++++||.|||+.+   |+||||+|+||+++.++.++|+|||++.....
T Consensus        82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~  158 (267)
T cd08224          82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR---IMHRDIKPANVFITATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence            9999999998885432 2345788999999999999999999988   99999999999999999999999999886543


Q ss_pred             CcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcc
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT  709 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~  709 (795)
                      ...  ......+++.|+|||.+.+..++.++|||||||++|+|++|+.|+.............    ......       
T Consensus       159 ~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~----~~~~~~-------  225 (267)
T cd08224         159 KTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKK----IEKCDY-------  225 (267)
T ss_pred             CCc--ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhh----hhcCCC-------
Confidence            221  1223468899999999988889999999999999999999999985443221111111    000000       


Q ss_pred             ccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          710 LQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       710 l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                       ...........+.+++.+||+.+|++||++.+|+++|...
T Consensus       226 -~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~  265 (267)
T cd08224         226 -PPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM  265 (267)
T ss_pred             -CCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence             0011113455778999999999999999999999999763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=100.00  E-value=1.1e-35  Score=318.82  Aligned_cols=263  Identities=29%  Similarity=0.437  Sum_probs=200.7

Q ss_pred             cCCccccccCcCCcccEEEeEec-----------------CcceEEEEEecccC-ccchHHHHHHHHHHHhcCCccccee
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-----------------NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRL  536 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-----------------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l  536 (795)
                      ++|++.++||+|+||.||+++..                 ++..+|+|++.... ....+.+.+|+++|++++|+||+++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~   84 (296)
T cd05095           5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL   84 (296)
T ss_pred             hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence            57999999999999999998532                 23468999987542 3345678999999999999999999


Q ss_pred             eeeeeecceeeEEeecCCCCChhhhhhccCC--------cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcE
Q 003786          537 LGCCIELEEKILIYEYMPNKSLDFFLFDSTK--------ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNI  608 (795)
Q Consensus       537 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NI  608 (795)
                      ++++...+..++||||+++++|.+++.....        ...+++..+..++.||+.||+|||+.+   |+||||||+||
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dlkp~Ni  161 (296)
T cd05095          85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN---FVHRDLATRNC  161 (296)
T ss_pred             EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---eecccCChheE
Confidence            9999999999999999999999998864321        134677789999999999999999998   99999999999


Q ss_pred             EECCCCCeeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh--CCCCCCCCCCcc
Q 003786          609 LLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS--SKRNTDFSNTNS  686 (795)
Q Consensus       609 ll~~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt--G~~p~~~~~~~~  686 (795)
                      +++.++.+||+|||+++.+.............+++.|+|||....+.++.++|||||||++|||++  |..|+.....  
T Consensus       162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~--  239 (296)
T cd05095         162 LVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSD--  239 (296)
T ss_pred             EEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccCh--
Confidence            999999999999999986543322222223345678999998888889999999999999999998  5556543222  


Q ss_pred             hhHhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHc
Q 003786          687 LTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT  748 (795)
Q Consensus       687 ~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~  748 (795)
                      ...................      ...+..++..+.+++.+||+.+|++||++.+|++.|.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~  295 (296)
T cd05095         240 EQVIENTGEFFRDQGRQVY------LPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL  295 (296)
T ss_pred             HHHHHHHHHHHhhcccccc------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            1111111111111100000      0111223467889999999999999999999999885

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.6e-36  Score=319.23  Aligned_cols=252  Identities=26%  Similarity=0.328  Sum_probs=201.7

Q ss_pred             CCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      +|++.+.||+|+||.||++... +++.||||++....   ......+.+|+.++++++||||+++++.+...+..++|||
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence            4788899999999999999864 58899999986532   2223457789999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      |+++++|..++... ....+++..+..++.|++.||.|||+.+   |+||||||+||++++++.++|+|||++.......
T Consensus        81 ~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~  156 (285)
T cd05605          81 LMNGGDLKFHIYNM-GNPGFDEERAVFYAAEITCGLEDLHRER---IVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE  156 (285)
T ss_pred             ccCCCcHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHEEECCCCCEEEeeCCCceecCCCC
Confidence            99999999887543 2345889999999999999999999998   9999999999999999999999999998653222


Q ss_pred             ccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcccc
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQ  711 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~  711 (795)
                         ......|++.|+|||++.+..++.++||||+||++|||++|+.||.........  ..........          .
T Consensus       157 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~--~~~~~~~~~~----------~  221 (285)
T cd05605         157 ---TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKR--EEVERRVKED----------Q  221 (285)
T ss_pred             ---ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHH--HHHHHHhhhc----------c
Confidence               122357899999999999889999999999999999999999999754322110  0000000000          0


Q ss_pred             chhhHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHH
Q 003786          712 NEASYLILNRYINVGLLCVQEDAADRP-----TMFEVVSM  746 (795)
Q Consensus       712 ~~~~~~~~~~l~~li~~cL~~dP~~RP-----t~~evl~~  746 (795)
                      ...+......+.+++.+||+.||++||     ++.+++++
T Consensus       222 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05605         222 EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH  261 (285)
T ss_pred             cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence            112223455678999999999999999     88899875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=4e-36  Score=316.91  Aligned_cols=255  Identities=25%  Similarity=0.366  Sum_probs=202.5

Q ss_pred             ccCCccccccCcCCcccEEEeEe-cCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          474 TANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      ..+|++.+.||+|+||.||+|+. .+++.||+|++..........+++|+.++++++||||+++++.+...+..++||||
T Consensus         8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~   87 (267)
T cd06646           8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY   87 (267)
T ss_pred             hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence            36799999999999999999986 46889999999765555566788999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      +++++|.+++..   ...+++..+..++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||++....... 
T Consensus        88 ~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~-  160 (267)
T cd06646          88 CGGGSLQDIYHV---TGPLSELQIAYVCRETLQGLAYLHSKG---KMHRDIKGANILLTDNGDVKLADFGVAAKITATI-  160 (267)
T ss_pred             CCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEECcCccceeecccc-
Confidence            999999998843   345788999999999999999999987   9999999999999999999999999998653221 


Q ss_pred             cccccccccccccccccccc---cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcc
Q 003786          633 QSKTKRIVGTYGYMSPEYAQ---QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT  709 (795)
Q Consensus       633 ~~~~~~~~gt~~y~APE~~~---~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~  709 (795)
                       .......|++.|+|||.+.   ...++.++|||||||++|||++|+.|+......... .     ......   ...+.
T Consensus       161 -~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~-~-----~~~~~~---~~~~~  230 (267)
T cd06646         161 -AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL-F-----LMSKSN---FQPPK  230 (267)
T ss_pred             -cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhh-e-----eeecCC---CCCCC
Confidence             1123356889999999874   345788999999999999999999988533211110 0     000000   00011


Q ss_pred             ccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          710 LQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       710 l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                      ..  .....+..+.+++.+||+.+|++||++++|+++|
T Consensus       231 ~~--~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l  266 (267)
T cd06646         231 LK--DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL  266 (267)
T ss_pred             Cc--cccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence            10  0112345778999999999999999999999865

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=2.2e-36  Score=327.21  Aligned_cols=242  Identities=26%  Similarity=0.355  Sum_probs=192.0

Q ss_pred             cccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhc-CCcccceeeeeeeecceeeEEeecCCC
Q 003786          481 NKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEEKILIYEYMPN  555 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~  555 (795)
                      +.||+|+||.||+|+.. +++.||+|++.+..   ....+.+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            46999999999999875 58899999997542   23345677788888754 899999999999999999999999999


Q ss_pred             CChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccccc
Q 003786          556 KSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK  635 (795)
Q Consensus       556 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~  635 (795)
                      ++|..++..   ...+++..+..++.||++||+|||+++   |+||||||+|||++.++.+||+|||+++......  ..
T Consensus        81 g~L~~~i~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~  152 (316)
T cd05620          81 GDLMFHIQD---KGRFDLYRATFYAAEIVCGLQFLHSKG---IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD--NR  152 (316)
T ss_pred             CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEeCccCCCeecccCC--Cc
Confidence            999888843   345788999999999999999999988   9999999999999999999999999987432111  12


Q ss_pred             ccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhh
Q 003786          636 TKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEAS  715 (795)
Q Consensus       636 ~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~  715 (795)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+...  .....    ...      .+.+    +
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~--~~~~~----~~~------~~~~----~  216 (316)
T cd05620         153 ASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDE--LFESI----RVD------TPHY----P  216 (316)
T ss_pred             eeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH--HHHHH----HhC------CCCC----C
Confidence            334679999999999999999999999999999999999999996543221  11111    000      0111    1


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCHH-HHHHH
Q 003786          716 YLILNRYINVGLLCVQEDAADRPTMF-EVVSM  746 (795)
Q Consensus       716 ~~~~~~l~~li~~cL~~dP~~RPt~~-evl~~  746 (795)
                      ......+.+++.+||+.||++||++. ++++|
T Consensus       217 ~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h  248 (316)
T cd05620         217 RWITKESKDILEKLFERDPTRRLGVVGNIRGH  248 (316)
T ss_pred             CCCCHHHHHHHHHHccCCHHHcCCChHHHHcC
Confidence            11334677899999999999999984 67644

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=100.00  E-value=5.6e-36  Score=314.53  Aligned_cols=254  Identities=31%  Similarity=0.438  Sum_probs=204.4

Q ss_pred             ccCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecC
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYM  553 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  553 (795)
                      .++|++.++||+|+||.||+|...+++.||+|.+.... ...+.+.+|+.++++++|+||+++++++ ..+..+++|||+
T Consensus         5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~e~~   82 (260)
T cd05067           5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITEYM   82 (260)
T ss_pred             hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEEEcC
Confidence            36789999999999999999998888999999986543 3457889999999999999999999986 456789999999


Q ss_pred             CCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccc
Q 003786          554 PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ  633 (795)
Q Consensus       554 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~  633 (795)
                      ++++|.+++.... ...+++..+..++.|++.||+|||+.+   ++||||||+||+++.++.++|+|||++.........
T Consensus        83 ~~~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~  158 (260)
T cd05067          83 ENGSLVDFLKTPE-GIKLTINKLIDMAAQIAEGMAFIERKN---YIHRDLRAANILVSETLCCKIADFGLARLIEDNEYT  158 (260)
T ss_pred             CCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHHhEEEcCCCCEEEccCcceeecCCCCcc
Confidence            9999998885432 345788899999999999999999987   999999999999999999999999999866432221


Q ss_pred             ccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCccccc
Q 003786          634 SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQN  712 (795)
Q Consensus       634 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~  712 (795)
                       ......++..|+|||.+....++.++||||||+++|||++ |+.|+........  ....    ....         ..
T Consensus       159 -~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~--~~~~----~~~~---------~~  222 (260)
T cd05067         159 -AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEV--IQNL----ERGY---------RM  222 (260)
T ss_pred             -cccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHH--HHHH----HcCC---------CC
Confidence             1122345678999999998899999999999999999998 9998865432211  1111    1110         00


Q ss_pred             hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          713 EASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       713 ~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      ..+...+.++.+++.+||+.+|++||++++++++|+.
T Consensus       223 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         223 PRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence            1112234578899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=6e-36  Score=324.80  Aligned_cols=247  Identities=23%  Similarity=0.322  Sum_probs=195.8

Q ss_pred             CCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcC-CcccceeeeeeeecceeeEEe
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQ-HRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~  550 (795)
                      +|+..+.||+|+||.||+|+.. +++.||||++.+..   ....+.+..|..+++.+. |++|+++++++.+.+..++||
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM   80 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence            4778899999999999999865 58899999987532   233456778999998885 577888999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      ||+++++|..++..   ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+++.....
T Consensus        81 Ey~~~g~L~~~i~~---~~~l~~~~~~~i~~qi~~al~~lH~~~---ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~  154 (323)
T cd05615          81 EYVNGGDLMYHIQQ---VGKFKEPQAVFYAAEISVGLFFLHRRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD  154 (323)
T ss_pred             cCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeccccccccCCC
Confidence            99999999988843   345889999999999999999999988   999999999999999999999999998754322


Q ss_pred             cccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccc
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL  710 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l  710 (795)
                      .  .......||+.|+|||++.+..++.++|||||||++|||++|+.||.......  ......    ....        
T Consensus       155 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~--~~~~i~----~~~~--------  218 (323)
T cd05615         155 G--VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE--LFQSIM----EHNV--------  218 (323)
T ss_pred             C--ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHH--HHHHHH----hCCC--------
Confidence            1  12234569999999999999999999999999999999999999987543211  111110    0000        


Q ss_pred             cchhhHHHHHHHHHHHHhhccCCCCCCCCH-----HHHHHH
Q 003786          711 QNEASYLILNRYINVGLLCVQEDAADRPTM-----FEVVSM  746 (795)
Q Consensus       711 ~~~~~~~~~~~l~~li~~cL~~dP~~RPt~-----~evl~~  746 (795)
                        ..+......+.+++.+||+.+|.+|++.     .+++++
T Consensus       219 --~~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h  257 (323)
T cd05615         219 --SYPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREH  257 (323)
T ss_pred             --CCCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcC
Confidence              0111233467789999999999999974     566554

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=100.00  E-value=2.5e-36  Score=320.84  Aligned_cols=260  Identities=27%  Similarity=0.373  Sum_probs=205.7

Q ss_pred             HccCCccccccCcCCcccEEEeEecC-----cceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeee-cce
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLLN-----GQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIE-LEE  545 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~  545 (795)
                      ..++|++.+.||+|+||.||+|....     ++.|++|++.... ....+.+.+|+.++++++||||+++++++.+ ...
T Consensus         4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~   83 (280)
T cd05043           4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP   83 (280)
T ss_pred             chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            35789999999999999999998765     6889999886432 2335668899999999999999999998776 467


Q ss_pred             eeEEeecCCCCChhhhhhccCCc-----ccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeec
Q 003786          546 KILIYEYMPNKSLDFFLFDSTKE-----NLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISD  620 (795)
Q Consensus       546 ~~lv~E~~~~gsL~~~l~~~~~~-----~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~D  620 (795)
                      .++++||+++++|..++......     ..+++..+..++.||+.||+|||+.+   ++||||||+||++++++.+||+|
T Consensus        84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kl~d  160 (280)
T cd05043          84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG---VIHKDIAARNCVIDEELQVKITD  160 (280)
T ss_pred             CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCHhhEEEcCCCcEEECC
Confidence            88999999999999998543322     45889999999999999999999987   99999999999999999999999


Q ss_pred             cccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccC
Q 003786          621 FGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKD  699 (795)
Q Consensus       621 FGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~  699 (795)
                      ||+++.+.............++..|+|||.+.+..++.++|||||||++|||++ |+.|+.....  ..+....    ..
T Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~----~~  234 (280)
T cd05043         161 NALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP--FEMAAYL----KD  234 (280)
T ss_pred             CCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH--HHHHHHH----Hc
Confidence            999986543332222223456778999999988889999999999999999998 9988864322  1111111    11


Q ss_pred             cccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          700 DRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       700 ~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                      ....         ......+..+.+++.+||+.+|++|||+.++++.|+..
T Consensus       235 ~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~  276 (280)
T cd05043         235 GYRL---------AQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDF  276 (280)
T ss_pred             CCCC---------CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence            1000         01112345678999999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=100.00  E-value=3.3e-36  Score=324.09  Aligned_cols=259  Identities=27%  Similarity=0.395  Sum_probs=204.6

Q ss_pred             HccCCccccccCcCCcccEEEeEec--------CcceEEEEEecccC-ccchHHHHHHHHHHHhc-CCcccceeeeeeee
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL--------NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIE  542 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~  542 (795)
                      ...+|++.+.||+|+||.||+++..        ++..||+|.+.... ......+.+|+.+++.+ +||||+++++++..
T Consensus        13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~   92 (304)
T cd05101          13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ   92 (304)
T ss_pred             cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence            3577899999999999999999741        24579999886542 33456789999999999 89999999999999


Q ss_pred             cceeeEEeecCCCCChhhhhhccCC-------------cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEE
Q 003786          543 LEEKILIYEYMPNKSLDFFLFDSTK-------------ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNIL  609 (795)
Q Consensus       543 ~~~~~lv~E~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIl  609 (795)
                      ....++||||+++++|.+++.....             ...+++..+..++.||++||.|||+.+   |+||||||+||+
T Consensus        93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nil  169 (304)
T cd05101          93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK---CIHRDLAARNVL  169 (304)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC---eeecccccceEE
Confidence            9999999999999999999865321             234777889999999999999999988   999999999999


Q ss_pred             ECCCCCeeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchh
Q 003786          610 LDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLT  688 (795)
Q Consensus       610 l~~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~  688 (795)
                      ++.++.+||+|||+++...............+++.|+|||.+.+..++.++||||||+++|+|++ |..|+........ 
T Consensus       170 i~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~-  248 (304)
T cd05101         170 VTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL-  248 (304)
T ss_pred             EcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHH-
Confidence            99999999999999987654332222333446778999999988899999999999999999998 7777754322111 


Q ss_pred             HhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          689 LLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       689 ~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                       ..    ........         ..+...+..+.+++.+||+.+|++||++.||++.|..
T Consensus       249 -~~----~~~~~~~~---------~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~  295 (304)
T cd05101         249 -FK----LLKEGHRM---------DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDR  295 (304)
T ss_pred             -HH----HHHcCCcC---------CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHH
Confidence             11    11111100         1112234577889999999999999999999999976

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=4.9e-36  Score=314.50  Aligned_cols=246  Identities=28%  Similarity=0.405  Sum_probs=194.2

Q ss_pred             ccCcCCcccEEEeEe---cCcceEEEEEecccCc--cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCCCC
Q 003786          482 KLGEGGFGPVYKGRL---LNGQEVAVKRLSSQSG--QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNK  556 (795)
Q Consensus       482 ~LG~G~~g~Vy~~~~---~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g  556 (795)
                      +||+|+||.||+|..   .+++.+|+|++.....  ...+++.+|+.++++++||||+++++++. .+..++||||++++
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~   80 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG   80 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence            699999999999964   3578899999864432  23467899999999999999999999875 55678999999999


Q ss_pred             ChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcccc-c
Q 003786          557 SLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQS-K  635 (795)
Q Consensus       557 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~-~  635 (795)
                      +|.+++..   ...+++..+..++.|++.||+|||+++   |+||||||.||+++.++.+||+|||++.......... .
T Consensus        81 ~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~  154 (257)
T cd05116          81 PLNKFLQK---NKHVTEKNITELVHQVSMGMKYLEETN---FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKA  154 (257)
T ss_pred             cHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchhhEEEcCCCeEEECCCccccccCCCCCeeee
Confidence            99998843   345889999999999999999999988   9999999999999999999999999998764332211 1


Q ss_pred             ccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchh
Q 003786          636 TKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEA  714 (795)
Q Consensus       636 ~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~  714 (795)
                      .....++..|+|||.+....++.++|||||||++|||++ |..||.......  .....    .....         ...
T Consensus       155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~i----~~~~~---------~~~  219 (257)
T cd05116         155 KTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNE--VTQMI----ESGER---------MEC  219 (257)
T ss_pred             cCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHH----HCCCC---------CCC
Confidence            122234678999999988889999999999999999998 898886533221  11111    11111         111


Q ss_pred             hHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          715 SYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       715 ~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      +...+..+.++|.+||+.+|++||++.+|++.|++
T Consensus       220 ~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~  254 (257)
T cd05116         220 PQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN  254 (257)
T ss_pred             CCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence            22234567899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.9e-36  Score=314.65  Aligned_cols=252  Identities=27%  Similarity=0.365  Sum_probs=201.3

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccCc-----cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeE
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG-----QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKIL  548 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  548 (795)
                      ++|++.+.||+|++|.||++... +++++|+|.+.....     .....+.+|++++++++||||+++++++.+.+..++
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI   81 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence            56899999999999999999864 589999998864321     123568899999999999999999999999999999


Q ss_pred             EeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccC
Q 003786          549 IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      |+||+++++|.+.+..   ...+++..+..++.|++.||.|||+.+   |+||||+|+||+++.++.++|+|||+++...
T Consensus        82 v~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~  155 (263)
T cd06625          82 FMEYMPGGSVKDQLKA---YGALTETVTRKYTRQILEGVEYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRLQ  155 (263)
T ss_pred             EEEECCCCcHHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecc
Confidence            9999999999988843   345788899999999999999999988   9999999999999999999999999997654


Q ss_pred             CCccccc-ccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccC
Q 003786          629 GDELQSK-TKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID  707 (795)
Q Consensus       629 ~~~~~~~-~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id  707 (795)
                      ....... .....++..|+|||.+.+..++.++||||||+++|||++|+.||........  ..   .......      
T Consensus       156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~--~~---~~~~~~~------  224 (263)
T cd06625         156 TICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAA--IF---KIATQPT------  224 (263)
T ss_pred             ccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHH--HH---HHhccCC------
Confidence            3221111 1235678899999999998899999999999999999999999854321111  10   0000000      


Q ss_pred             ccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          708 PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       708 ~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                         ....+......+.+++.+||+.+|++||++.+++++
T Consensus       225 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  260 (263)
T cd06625         225 ---NPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH  260 (263)
T ss_pred             ---CCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence               111222344567889999999999999999999975

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=3.1e-36  Score=324.80  Aligned_cols=259  Identities=28%  Similarity=0.385  Sum_probs=203.3

Q ss_pred             ccCCccccccCcCCcccEEEeEec--------CcceEEEEEecccC-ccchHHHHHHHHHHHhc-CCcccceeeeeeeec
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL--------NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIEL  543 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~  543 (795)
                      .++|.+.+.||+|+||.||+++..        +.+.+|+|.+.... .....++.+|+++++++ +||||+++++++...
T Consensus        17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~   96 (307)
T cd05098          17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD   96 (307)
T ss_pred             hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence            467999999999999999999742        23569999987542 23446788899999999 799999999999999


Q ss_pred             ceeeEEeecCCCCChhhhhhccCC-------------cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEE
Q 003786          544 EEKILIYEYMPNKSLDFFLFDSTK-------------ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILL  610 (795)
Q Consensus       544 ~~~~lv~E~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll  610 (795)
                      +..++||||+++++|.+++.....             ...+++..+..++.||+.||+|||+.+   ++||||||+||++
T Consensus        97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill  173 (307)
T cd05098          97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLV  173 (307)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHHheEE
Confidence            999999999999999999865321             234788899999999999999999987   9999999999999


Q ss_pred             CCCCCeeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhH
Q 003786          611 DKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTL  689 (795)
Q Consensus       611 ~~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~  689 (795)
                      +.++.+||+|||++................+++.|+|||.+.+..++.++|||||||++|||++ |..|+.......  .
T Consensus       174 ~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~--~  251 (307)
T cd05098         174 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE--L  251 (307)
T ss_pred             cCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHH--H
Confidence            9999999999999876543222122222234578999999998899999999999999999998 778875432211  1


Q ss_pred             hHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          690 LGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       690 ~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                      ...    ......         ...+......+.+++.+||+.+|++||++.+|++.|...
T Consensus       252 ~~~----~~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~  299 (307)
T cd05098         252 FKL----LKEGHR---------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI  299 (307)
T ss_pred             HHH----HHcCCC---------CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence            111    011110         111222345777899999999999999999999999763

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=3.9e-36  Score=325.22  Aligned_cols=242  Identities=26%  Similarity=0.339  Sum_probs=192.0

Q ss_pred             cccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHh-cCCcccceeeeeeeecceeeEEeecCCC
Q 003786          481 NKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAK-LQHRNLVRLLGCCIELEEKILIYEYMPN  555 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~~~~~~lv~E~~~~  555 (795)
                      +.||+|+||.||+|+.. +++.||||++....   ....+.+..|..++.. ++||||+++++++.+.+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            46999999999999865 47889999997542   2334556678888876 4899999999999999999999999999


Q ss_pred             CChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccccc
Q 003786          556 KSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK  635 (795)
Q Consensus       556 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~  635 (795)
                      |+|..++..   ...+++..+..++.||++||.|||+.+   |+||||||+|||++.++.+||+|||+++......  ..
T Consensus        81 g~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~  152 (316)
T cd05619          81 GDLMFHIQS---CHKFDLPRATFYAAEIICGLQFLHSKG---IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD--AK  152 (316)
T ss_pred             CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEccCCcceECCCCC--Cc
Confidence            999988843   345788899999999999999999988   9999999999999999999999999987532211  12


Q ss_pred             ccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhh
Q 003786          636 TKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEAS  715 (795)
Q Consensus       636 ~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~  715 (795)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||.......  .....    ...      .+.    .+
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~--~~~~i----~~~------~~~----~~  216 (316)
T cd05619         153 TCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEE--LFQSI----RMD------NPC----YP  216 (316)
T ss_pred             eeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHH--HHHHH----HhC------CCC----CC
Confidence            234578999999999999899999999999999999999999986543211  11111    000      011    11


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCHH-HHHHH
Q 003786          716 YLILNRYINVGLLCVQEDAADRPTMF-EVVSM  746 (795)
Q Consensus       716 ~~~~~~l~~li~~cL~~dP~~RPt~~-evl~~  746 (795)
                      ......+.+++.+||+.+|++||++. +++++
T Consensus       217 ~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h  248 (316)
T cd05619         217 RWLTREAKDILVKLFVREPERRLGVKGDIRQH  248 (316)
T ss_pred             ccCCHHHHHHHHHHhccCHhhcCCChHHHHcC
Confidence            12334677899999999999999997 67654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=3.9e-36  Score=320.08  Aligned_cols=270  Identities=26%  Similarity=0.388  Sum_probs=200.5

Q ss_pred             cCCccccccCcCCcccEEEeEec-----CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeec--ceee
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-----NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL--EEKI  547 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~  547 (795)
                      .+|++.+.||+|+||.||++...     +++.||+|++........+.+.+|++++++++||||+++++++...  ...+
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   83 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR   83 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence            57888999999999999999742     4788999998766555567899999999999999999999987543  4678


Q ss_pred             EEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccccc
Q 003786          548 LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF  627 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~  627 (795)
                      +|+||+++++|.+++...  ...+++..+..++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||++...
T Consensus        84 lv~e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~~l~~aL~~LH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~  158 (284)
T cd05081          84 LVMEYLPYGSLRDYLQKH--RERLDHRKLLLYASQICKGMEYLGSKR---YVHRDLATRNILVESENRVKIGDFGLTKVL  158 (284)
T ss_pred             EEEEecCCCCHHHHHHhc--CcCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHhhEEECCCCeEEECCCcccccc
Confidence            999999999999998432  235889999999999999999999988   999999999999999999999999999876


Q ss_pred             CCCcccc-cccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhh-hccCcccccc
Q 003786          628 GGDELQS-KTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWD-LWKDDRAWEL  705 (795)
Q Consensus       628 ~~~~~~~-~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~  705 (795)
                      ....... ......++..|+|||.+.+..++.++|||||||+++||++|..++................ ........+.
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
T cd05081         159 PQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIEL  238 (284)
T ss_pred             cCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHH
Confidence            4322111 1111223456999999988899999999999999999999876653221110000000000 0000000000


Q ss_pred             cCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          706 IDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       706 id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      +............+..+.+++.+||+.+|++|||+.||++.|+.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~  282 (284)
T cd05081         239 LKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEA  282 (284)
T ss_pred             HhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHh
Confidence            11110111112234578899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=100.00  E-value=3.3e-36  Score=334.60  Aligned_cols=258  Identities=26%  Similarity=0.358  Sum_probs=201.6

Q ss_pred             cCCccccccCcCCcccEEEeEec------CcceEEEEEecccCc-cchHHHHHHHHHHHhcC-Ccccceeeeeeeeccee
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL------NGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQ-HRNLVRLLGCCIELEEK  546 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~  546 (795)
                      ++|.+.++||+|+||.||+|++.      .++.||||++..... ...+.+.+|+++|.++. ||||+++++++......
T Consensus        37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~  116 (401)
T cd05107          37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPI  116 (401)
T ss_pred             HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCc
Confidence            56888899999999999999742      346799999975432 22457889999999997 99999999999999999


Q ss_pred             eEEeecCCCCChhhhhhccCC-----------------------------------------------------------
Q 003786          547 ILIYEYMPNKSLDFFLFDSTK-----------------------------------------------------------  567 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~-----------------------------------------------------------  567 (795)
                      ++||||+++|+|.++++....                                                           
T Consensus       117 ~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (401)
T cd05107         117 YIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMK  196 (401)
T ss_pred             EEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcch
Confidence            999999999999999864321                                                           


Q ss_pred             ------------------------------------cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEEC
Q 003786          568 ------------------------------------ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLD  611 (795)
Q Consensus       568 ------------------------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~  611 (795)
                                                          ...+++..+..++.||+.||.|||+.+   |+||||||+|||++
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrdlkp~NiLl~  273 (401)
T cd05107         197 GTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN---CVHRDLAARNVLIC  273 (401)
T ss_pred             hhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---cCcccCCcceEEEe
Confidence                                                123566678889999999999999987   99999999999999


Q ss_pred             CCCCeeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHh
Q 003786          612 KDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLL  690 (795)
Q Consensus       612 ~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~  690 (795)
                      +++.+||+|||+++...............+++.|+|||.+.+..++.++|||||||++|||++ |+.|+......... .
T Consensus       274 ~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~-~  352 (401)
T cd05107         274 EGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQF-Y  352 (401)
T ss_pred             CCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHH-H
Confidence            999999999999986532221112223456789999999998889999999999999999998 88887643322211 1


Q ss_pred             HhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          691 GHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       691 ~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      ..    ...+.         ....+......+.+++.+||+.+|++||++++|++.|+.
T Consensus       353 ~~----~~~~~---------~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~  398 (401)
T cd05107         353 NA----IKRGY---------RMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGD  398 (401)
T ss_pred             HH----HHcCC---------CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            00    00010         001111234578899999999999999999999999976

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=100.00  E-value=3.8e-36  Score=323.30  Aligned_cols=258  Identities=28%  Similarity=0.387  Sum_probs=203.6

Q ss_pred             ccCCccccccCcCCcccEEEeEec------CcceEEEEEecccC-ccchHHHHHHHHHHHhc-CCcccceeeeeeeecce
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL------NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEE  545 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~  545 (795)
                      .++|++.+.||+|+||.||+++..      .+..+|||++.... ....+.+.+|+++++++ +||||+++++++...+.
T Consensus        34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  113 (302)
T cd05055          34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP  113 (302)
T ss_pred             HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence            357999999999999999999741      34579999987543 23346789999999999 79999999999999999


Q ss_pred             eeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccc
Q 003786          546 KILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR  625 (795)
Q Consensus       546 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~  625 (795)
                      .++||||+++++|..++.... ...+++..+..++.||+.||+|||+++   |+|+||||+|||++.++.+||+|||+++
T Consensus       114 ~~lv~e~~~~~~L~~~i~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~dfg~~~  189 (302)
T cd05055         114 ILVITEYCCYGDLLNFLRRKR-ESFLTLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNVLLTHGKIVKICDFGLAR  189 (302)
T ss_pred             eEEEEEcCCCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eehhhhccceEEEcCCCeEEECCCcccc
Confidence            999999999999999885422 234789999999999999999999988   9999999999999999999999999998


Q ss_pred             ccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCccccc
Q 003786          626 IFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWE  704 (795)
Q Consensus       626 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  704 (795)
                      ...............++..|+|||.+.+..++.++|||||||++|||++ |..|+........ ....    .....   
T Consensus       190 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~-~~~~----~~~~~---  261 (302)
T cd05055         190 DIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSK-FYKL----IKEGY---  261 (302)
T ss_pred             cccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHH-HHHH----HHcCC---
Confidence            6543321111222346788999999999999999999999999999998 8888754332211 1110    11110   


Q ss_pred             ccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          705 LIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       705 ~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                            ....+......+.+++.+||+.+|++||++.|+++.|..
T Consensus       262 ------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~  300 (302)
T cd05055         262 ------RMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGK  300 (302)
T ss_pred             ------cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHh
Confidence                  000111224568899999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=3.5e-36  Score=321.27  Aligned_cols=260  Identities=27%  Similarity=0.426  Sum_probs=202.2

Q ss_pred             HccCCccccccCcCCcccEEEeEec------CcceEEEEEecccCc-cchHHHHHHHHHHHhcCCcccceeeeeeeecce
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL------NGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEE  545 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  545 (795)
                      ..++|++.++||+|+||.||+|+..      .+..||+|.+..... .....+.+|+.+++.++||||+++++++.+...
T Consensus         4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   83 (288)
T cd05061           4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP   83 (288)
T ss_pred             cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            4578999999999999999999753      245799998864432 233467889999999999999999999999999


Q ss_pred             eeEEeecCCCCChhhhhhccCC-------cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeee
Q 003786          546 KILIYEYMPNKSLDFFLFDSTK-------ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKI  618 (795)
Q Consensus       546 ~~lv~E~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL  618 (795)
                      .++||||+++|+|.+++.....       ...+.+..+..++.|++.||.|||+++   |+||||||+||+++.++.+||
T Consensus        84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dikp~nili~~~~~~~L  160 (288)
T cd05061          84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKI  160 (288)
T ss_pred             cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCCChheEEEcCCCcEEE
Confidence            9999999999999999854221       233456678899999999999999988   999999999999999999999


Q ss_pred             eccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhc
Q 003786          619 SDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLW  697 (795)
Q Consensus       619 ~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~  697 (795)
                      +|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |..|+.......  .....   .
T Consensus       161 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~--~~~~~---~  235 (288)
T cd05061         161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ--VLKFV---M  235 (288)
T ss_pred             CcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHH---H
Confidence            99999986543332222223345778999999998899999999999999999998 677775432211  11110   0


Q ss_pred             cCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          698 KDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       698 ~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                       ......         .+...+..+.+++.+||+.+|++||++.++++.|...
T Consensus       236 -~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~  278 (288)
T cd05061         236 -DGGYLD---------QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD  278 (288)
T ss_pred             -cCCCCC---------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence             010000         1112235788999999999999999999999998773

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=7.3e-36  Score=312.98  Aligned_cols=250  Identities=36%  Similarity=0.518  Sum_probs=203.6

Q ss_pred             cccCcCCcccEEEeEecC----cceEEEEEecccCccc-hHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCCC
Q 003786          481 NKLGEGGFGPVYKGRLLN----GQEVAVKRLSSQSGQG-QEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPN  555 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~  555 (795)
                      +.||+|+||.||+|....    +..+++|++....... .+.+.+|+++++.++|+||+++++++......++||||+++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            479999999999998653    7889999997654333 67899999999999999999999999999999999999999


Q ss_pred             CChhhhhhccCC------cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          556 KSLDFFLFDSTK------ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       556 gsL~~~l~~~~~------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      ++|.+++.....      ...+++..+..++.|+++||.|||+++   |+|+||||+||+++.++.+||+|||.+.....
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~  157 (262)
T cd00192          81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK---FVHRDLAARNCLVGEDLVVKISDFGLSRDVYD  157 (262)
T ss_pred             CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC---cccCccCcceEEECCCCcEEEccccccccccc
Confidence            999999865421      366899999999999999999999988   99999999999999999999999999987654


Q ss_pred             CcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCc
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP  708 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~  708 (795)
                      ...........+++.|+|||.+....++.++|||||||++|||++ |..|+.......  .....    ....       
T Consensus       158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~~----~~~~-------  224 (262)
T cd00192         158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEE--VLEYL----RKGY-------  224 (262)
T ss_pred             ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHH--HHHHH----HcCC-------
Confidence            432223344567889999999988899999999999999999999 588886542211  11111    1110       


Q ss_pred             cccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHc
Q 003786          709 TLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT  748 (795)
Q Consensus       709 ~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~  748 (795)
                        ....+...+..+.+++.+||+.+|++||++.|++++|+
T Consensus       225 --~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         225 --RLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             --CCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence              01112233567889999999999999999999999874

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=7.3e-36  Score=322.19  Aligned_cols=265  Identities=23%  Similarity=0.332  Sum_probs=199.5

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccCc-cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      ++|++.++||+|+||.||+|+.. +++.||+|++..... .....+.+|++++++++||||+++++++..++..++||||
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   85 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY   85 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence            67999999999999999999865 578899999865432 2345678899999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      +++ +|..++...  ...+++..+..++.||+.||+|||+.+   |+||||||+||+++.++.+||+|||++....... 
T Consensus        86 ~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-  158 (309)
T cd07872          86 LDK-DLKQYMDDC--GNIMSMHNVKIFLYQILRGLAYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSVPT-  158 (309)
T ss_pred             CCC-CHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECccccceecCCCc-
Confidence            986 676666432  345788899999999999999999988   9999999999999999999999999997643222 


Q ss_pred             ccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchh-HhHh--------HhhhccCccc
Q 003786          633 QSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLT-LLGH--------AWDLWKDDRA  702 (795)
Q Consensus       633 ~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~-~~~~--------~~~~~~~~~~  702 (795)
                       .......+++.|+|||.+.+ ..++.++|||||||++|+|++|+.||......... ....        .|........
T Consensus       159 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (309)
T cd07872         159 -KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDE  237 (309)
T ss_pred             -cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhh
Confidence             11223467899999998865 56899999999999999999999999765432211 1100        0000000000


Q ss_pred             ccccC-ccccc----hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          703 WELID-PTLQN----EASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       703 ~~~id-~~l~~----~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                      ....+ +....    .........+.+++.+||+.||.+|||+.|++++-
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~  287 (309)
T cd07872         238 FKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHA  287 (309)
T ss_pred             hhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcCh
Confidence            00000 00000    01112345678999999999999999999999854

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=5.7e-36  Score=321.12  Aligned_cols=255  Identities=27%  Similarity=0.395  Sum_probs=199.1

Q ss_pred             cCCccccccCcCCcccEEEeEecC-cc--eEEEEEeccc-CccchHHHHHHHHHHHhc-CCcccceeeeeeeecceeeEE
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLN-GQ--EVAVKRLSSQ-SGQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~-~~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv  549 (795)
                      ++|++.+.||+|+||.||+|+..+ +.  .+++|.+... .....+.+.+|+++++++ +||||+++++++.+....++|
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv   81 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA   81 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence            578999999999999999998654 33  4788887642 233456788999999999 799999999999999999999


Q ss_pred             eecCCCCChhhhhhccC-------------CcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCe
Q 003786          550 YEYMPNKSLDFFLFDST-------------KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNP  616 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~v  616 (795)
                      +||+++++|.+++....             ....+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~  158 (297)
T cd05089          82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ---FIHRDLAARNVLVGENLAS  158 (297)
T ss_pred             EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCcCCcceEEECCCCeE
Confidence            99999999999985432             1134788899999999999999999987   9999999999999999999


Q ss_pred             eeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhh
Q 003786          617 KISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWD  695 (795)
Q Consensus       617 kL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~  695 (795)
                      ||+|||++......   ........+..|+|||.+....++.++|||||||++|||++ |..||........  ...   
T Consensus       159 kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~--~~~---  230 (297)
T cd05089         159 KIADFGLSRGEEVY---VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAEL--YEK---  230 (297)
T ss_pred             EECCcCCCccccce---eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH--HHH---
Confidence            99999998643211   11111223567999999988899999999999999999997 9988865432211  111   


Q ss_pred             hccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          696 LWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       696 ~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                       ....         .....+......+.+++.+||+.+|.+||++.++++.|...
T Consensus       231 -~~~~---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  275 (297)
T cd05089         231 -LPQG---------YRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRM  275 (297)
T ss_pred             -HhcC---------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence             1111         01111122345678999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=1.2e-36  Score=329.82  Aligned_cols=238  Identities=25%  Similarity=0.300  Sum_probs=191.6

Q ss_pred             cccCcCCcccEEEeEe----cCcceEEEEEecccCc--cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCC
Q 003786          481 NKLGEGGFGPVYKGRL----LNGQEVAVKRLSSQSG--QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMP  554 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~  554 (795)
                      +.||+|+||.||+++.    .+++.||+|++.+...  .....+.+|+++|++++||||+++++++.+....++||||++
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            6799999999999975    3578999999975432  234567789999999999999999999999999999999999


Q ss_pred             CCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcccc
Q 003786          555 NKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQS  634 (795)
Q Consensus       555 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~  634 (795)
                      +++|..++..   ...+++..+..++.||++||.|||+++   |+||||||+|||++.++.+||+|||+++......  .
T Consensus        82 ~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~--~  153 (318)
T cd05582          82 GGDLFTRLSK---EVMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE--K  153 (318)
T ss_pred             CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHeEECCCCcEEEeeccCCcccCCCC--C
Confidence            9999888843   345889999999999999999999998   9999999999999999999999999988653321  1


Q ss_pred             cccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchh
Q 003786          635 KTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEA  714 (795)
Q Consensus       635 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~  714 (795)
                      ......|++.|+|||.+.+..++.++|||||||++|||++|+.||........  ...   ... ...          ..
T Consensus       154 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~--~~~---i~~-~~~----------~~  217 (318)
T cd05582         154 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKET--MTM---ILK-AKL----------GM  217 (318)
T ss_pred             ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHH--HHH---HHc-CCC----------CC
Confidence            23346799999999999988899999999999999999999999865432111  110   000 000          01


Q ss_pred             hHHHHHHHHHHHHhhccCCCCCCCCHHH
Q 003786          715 SYLILNRYINVGLLCVQEDAADRPTMFE  742 (795)
Q Consensus       715 ~~~~~~~l~~li~~cL~~dP~~RPt~~e  742 (795)
                      +......+.+++.+||+.||++||++.+
T Consensus       218 p~~~~~~~~~li~~~l~~~P~~R~~a~~  245 (318)
T cd05582         218 PQFLSPEAQSLLRALFKRNPANRLGAGP  245 (318)
T ss_pred             CCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence            1223456778999999999999999544

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=5.1e-36  Score=324.71  Aligned_cols=242  Identities=24%  Similarity=0.317  Sum_probs=194.9

Q ss_pred             cccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhc-CCcccceeeeeeeecceeeEEeecCCC
Q 003786          481 NKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEEKILIYEYMPN  555 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~  555 (795)
                      +.||+|+||.||+|+.. +++.||||++.+..   ......+.+|.++++.+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            46999999999999865 47899999997542   23345677899999888 699999999999999999999999999


Q ss_pred             CChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccccc
Q 003786          556 KSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK  635 (795)
Q Consensus       556 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~  635 (795)
                      ++|..++..   ...+++..+..++.||+.||.|||+.+   |+||||||+||+++.++.+||+|||+++......  ..
T Consensus        81 ~~L~~~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--~~  152 (318)
T cd05570          81 GDLMFHIQR---SGRFDEPRARFYAAEIVLGLQFLHERG---IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG--VT  152 (318)
T ss_pred             CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEccCCCHHHeEECCCCcEEecccCCCeecCcCC--Cc
Confidence            999888743   335889999999999999999999988   9999999999999999999999999987532211  12


Q ss_pred             ccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhh
Q 003786          636 TKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEAS  715 (795)
Q Consensus       636 ~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~  715 (795)
                      .....|++.|+|||++.+..++.++|||||||++|+|++|+.||........  ....    .....          ..+
T Consensus       153 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~--~~~i----~~~~~----------~~~  216 (318)
T cd05570         153 TSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDEL--FQSI----LEDEV----------RYP  216 (318)
T ss_pred             ccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHH--HHHH----HcCCC----------CCC
Confidence            2345789999999999999999999999999999999999999865432111  1110    00000          011


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCH-----HHHHHH
Q 003786          716 YLILNRYINVGLLCVQEDAADRPTM-----FEVVSM  746 (795)
Q Consensus       716 ~~~~~~l~~li~~cL~~dP~~RPt~-----~evl~~  746 (795)
                      ......+.+++.+||+.||++||++     .+++++
T Consensus       217 ~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~  252 (318)
T cd05570         217 RWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH  252 (318)
T ss_pred             CcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence            1234567899999999999999999     888875

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=100.00  E-value=1.3e-35  Score=312.95  Aligned_cols=258  Identities=26%  Similarity=0.393  Sum_probs=207.1

Q ss_pred             cCCccccccCcCCcccEEEeEe-cCcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          475 ANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      ++|++.+.||+|+||.||+++. .+++.+|||.+....   .....++.+|+.+++.++||||+++++++.+.+..+++|
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL   81 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence            4688899999999999999985 478999999886532   223457889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccC-CcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          551 EYMPNKSLDFFLFDST-KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      ||+++++|.+++.... ....+++..+..++.||++||.|||+.+   ++|+||||+||+++.++.++|+|||++.....
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~  158 (267)
T cd08229          82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence            9999999999885422 2356889999999999999999999988   99999999999999999999999999886543


Q ss_pred             CcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcc
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT  709 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~  709 (795)
                      ...  ......|+..|+|||.+.+..++.++|+||||+++|+|++|..|+..............    .     ....+ 
T Consensus       159 ~~~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~----~-----~~~~~-  226 (267)
T cd08229         159 KTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKI----E-----QCDYP-  226 (267)
T ss_pred             CCc--ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhh----h-----cCCCC-
Confidence            221  12235688999999999988999999999999999999999999864332221111110    0     00001 


Q ss_pred             ccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          710 LQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       710 l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                        ..........+.+++.+||+.+|++|||+.+|+++++.
T Consensus       227 --~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~  264 (267)
T cd08229         227 --PLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKR  264 (267)
T ss_pred             --CCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhh
Confidence              11112345578899999999999999999999998865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=3.2e-36  Score=327.02  Aligned_cols=242  Identities=24%  Similarity=0.285  Sum_probs=190.1

Q ss_pred             cccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHH-HHHhcCCcccceeeeeeeecceeeEEeecCCC
Q 003786          481 NKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIK-LIAKLQHRNLVRLLGCCIELEEKILIYEYMPN  555 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~  555 (795)
                      +.||+|+||.||+|+.. +++.||||++.+..   .....++.+|.. +++.++||||+++++.+.+.+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            46999999999999875 58999999986532   122334455554 56789999999999999999999999999999


Q ss_pred             CChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccccc
Q 003786          556 KSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK  635 (795)
Q Consensus       556 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~  635 (795)
                      ++|..++..   ...+++..+..++.||++||.|||+++   |+||||||+|||++.++.+||+|||++.......  ..
T Consensus        81 g~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~g---ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~--~~  152 (323)
T cd05575          81 GELFFHLQR---ERSFPEPRARFYAAEIASALGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHS--KT  152 (323)
T ss_pred             CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeccCCCcccccCC--Cc
Confidence            999888843   345888999999999999999999998   9999999999999999999999999987532211  22


Q ss_pred             ccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhh
Q 003786          636 TKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEAS  715 (795)
Q Consensus       636 ~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~  715 (795)
                      .....||+.|+|||++.+..++.++|||||||++|||++|..||...+....  ...   ... ...          ..+
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~--~~~---i~~-~~~----------~~~  216 (323)
T cd05575         153 TSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEM--YDN---ILN-KPL----------RLK  216 (323)
T ss_pred             cccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHH--HHH---HHc-CCC----------CCC
Confidence            3346799999999999999999999999999999999999999865432111  110   000 000          011


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCHH----HHHHH
Q 003786          716 YLILNRYINVGLLCVQEDAADRPTMF----EVVSM  746 (795)
Q Consensus       716 ~~~~~~l~~li~~cL~~dP~~RPt~~----evl~~  746 (795)
                      ......+.+++.+||+.+|++||++.    |++++
T Consensus       217 ~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~  251 (323)
T cd05575         217 PNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNH  251 (323)
T ss_pred             CCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcC
Confidence            12245678899999999999999984    66553

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=7.5e-36  Score=317.17  Aligned_cols=250  Identities=24%  Similarity=0.380  Sum_probs=198.0

Q ss_pred             cCCccccccCcCCcccEEEeEe-cCcceEEEEEeccc-CccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          475 ANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQ-SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      ++|++.++||+|+||.||+|+. .+++.||+|++... .....+++.+|++++++++||||+++++++...+..++||||
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   80 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF   80 (279)
T ss_pred             CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence            3678889999999999999985 46889999998654 233446788999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      +++++|..+.       .+++..+..++.|++.||.|||+.+   |+|+||||+||+++.++.+||+|||++......  
T Consensus        81 ~~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~--  148 (279)
T cd06619          81 MDGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLWSLK---ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS--  148 (279)
T ss_pred             CCCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCCHHHEEECCCCCEEEeeCCcceecccc--
Confidence            9999996542       3677888999999999999999988   999999999999999999999999999765322  


Q ss_pred             cccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhH-hHhhhccCcccccccCcccc
Q 003786          633 QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLG-HAWDLWKDDRAWELIDPTLQ  711 (795)
Q Consensus       633 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~id~~l~  711 (795)
                        ......|+..|+|||.+.+..++.++|||||||++|+|++|+.||............ ..........     .+.+ 
T Consensus       149 --~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-  220 (279)
T cd06619         149 --IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED-----PPVL-  220 (279)
T ss_pred             --cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccC-----CCCC-
Confidence              223357899999999999889999999999999999999999998643211111000 0000000000     0000 


Q ss_pred             chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          712 NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       712 ~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                        .......++.+++.+||+.+|++||+++|++++
T Consensus       221 --~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~  253 (279)
T cd06619         221 --PVGQFSEKFVHFITQCMRKQPKERPAPENLMDH  253 (279)
T ss_pred             --CCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence              011133467899999999999999999999985

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=4.1e-36  Score=332.02  Aligned_cols=258  Identities=21%  Similarity=0.254  Sum_probs=201.1

Q ss_pred             HHHHccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecce
Q 003786          470 VSAATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEE  545 (795)
Q Consensus       470 i~~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  545 (795)
                      +....++|++.+.||+|+||.||+++.. +++.+|+|++.+..   ....+.+.+|+.+++.++||||+++++.+.+...
T Consensus        38 ~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~  117 (371)
T cd05622          38 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRY  117 (371)
T ss_pred             cCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE
Confidence            3445689999999999999999999875 58889999986432   2234567889999999999999999999999999


Q ss_pred             eeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccc
Q 003786          546 KILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR  625 (795)
Q Consensus       546 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~  625 (795)
                      .++||||+++|+|..++..    ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++.
T Consensus       118 ~~lv~Ey~~gg~L~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NIll~~~~~ikL~DfG~a~  190 (371)
T cd05622         118 LYMVMEYMPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCM  190 (371)
T ss_pred             EEEEEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHEEECCCCCEEEEeCCcee
Confidence            9999999999999998843    23788889999999999999999998   9999999999999999999999999998


Q ss_pred             ccCCCcccccccccccccccccccccccC----CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcc
Q 003786          626 IFGGDELQSKTKRIVGTYGYMSPEYAQQG----LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDR  701 (795)
Q Consensus       626 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~----~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~  701 (795)
                      ....... .......||+.|||||++.+.    .++.++|||||||++|||++|..||...+....  ..   .......
T Consensus       191 ~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~--~~---~i~~~~~  264 (371)
T cd05622         191 KMNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT--YS---KIMNHKN  264 (371)
T ss_pred             EcCcCCc-ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHH--HH---HHHcCCC
Confidence            7643321 122346799999999998653    388999999999999999999999975432111  11   1111111


Q ss_pred             cccccCccccchhhHHHHHHHHHHHHhhccCCCCC--CCCHHHHHHHH
Q 003786          702 AWELIDPTLQNEASYLILNRYINVGLLCVQEDAAD--RPTMFEVVSML  747 (795)
Q Consensus       702 ~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~--RPt~~evl~~L  747 (795)
                      ....       .........+.++|.+||+..+.+  ||++.|++++.
T Consensus       265 ~~~~-------~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~  305 (371)
T cd05622         265 SLTF-------PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL  305 (371)
T ss_pred             cccC-------CCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence            1111       011123456778999999854443  78999999975

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=100.00  E-value=6.4e-36  Score=319.13  Aligned_cols=258  Identities=27%  Similarity=0.409  Sum_probs=202.8

Q ss_pred             ccCCccccccCcCCcccEEEeEec------CcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeeccee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL------NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEK  546 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  546 (795)
                      .++|++.+.||+|+||.||+|+..      ++..+|+|++.... .....++.+|+.++++++||||+++++++.++...
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~   83 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM   83 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence            467899999999999999999853      46789999986543 23356788999999999999999999999999999


Q ss_pred             eEEeecCCCCChhhhhhccCC-------------------cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCc
Q 003786          547 ILIYEYMPNKSLDFFLFDSTK-------------------ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASN  607 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~-------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~N  607 (795)
                      ++||||+++++|.+++.....                   ...+++..+..++.||+.||.|||+.+   ++||||||+|
T Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~---i~H~dl~p~n  160 (288)
T cd05050          84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK---FVHRDLATRN  160 (288)
T ss_pred             EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---eecccccHhh
Confidence            999999999999999853221                   124677888999999999999999987   9999999999


Q ss_pred             EEECCCCCeeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcc
Q 003786          608 ILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNS  686 (795)
Q Consensus       608 Ill~~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~  686 (795)
                      |+++.++.+||+|||++.................+..|+|||.+.+..++.++|||||||++|||++ |..|+.......
T Consensus       161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~  240 (288)
T cd05050         161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEE  240 (288)
T ss_pred             eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            9999999999999999876543322122222345678999999988899999999999999999997 777775332211


Q ss_pred             hhHhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          687 LTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       687 ~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                        ....    .......         ..+...+.++.+++.+||+.+|++||++.|+++.|+.
T Consensus       241 --~~~~----~~~~~~~---------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~  288 (288)
T cd05050         241 --VIYY----VRDGNVL---------SCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR  288 (288)
T ss_pred             --HHHH----HhcCCCC---------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence              1111    1111111         0112234678899999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=1.3e-35  Score=318.29  Aligned_cols=251  Identities=25%  Similarity=0.375  Sum_probs=204.7

Q ss_pred             ccCCccccccCcCCcccEEEeEe-cCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          474 TANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      ..+|++.+.||+|+||.||+|+. .+++.+|+|.+........+.+.+|+.+++.+.||||+++++.+......++||||
T Consensus        19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~   98 (296)
T cd06654          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (296)
T ss_pred             ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecc
Confidence            36899999999999999999985 46889999999766555667889999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      +++++|.+++..    ..+++..+..++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||++....... 
T Consensus        99 ~~~~~L~~~~~~----~~~~~~~~~~i~~ql~~aL~~LH~~g---i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~-  170 (296)
T cd06654          99 LAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-  170 (296)
T ss_pred             cCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEECccccchhccccc-
Confidence            999999998842    34788899999999999999999988   9999999999999999999999999988653322 


Q ss_pred             cccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccc
Q 003786          633 QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQN  712 (795)
Q Consensus       633 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~  712 (795)
                       .......|++.|+|||.+.+..++.++|||||||++|+|++|+.||......... ..    ..... ...     +  
T Consensus       171 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~-~~----~~~~~-~~~-----~--  236 (296)
T cd06654         171 -SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL-YL----IATNG-TPE-----L--  236 (296)
T ss_pred             -cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhH-HH----HhcCC-CCC-----C--
Confidence             1122356889999999998888999999999999999999999998654321111 10    00000 000     0  


Q ss_pred             hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          713 EASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       713 ~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ..+......+.+++.+||+.+|++||++.+++++
T Consensus       237 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~  270 (296)
T cd06654         237 QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH  270 (296)
T ss_pred             CCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence            1122344567889999999999999999999984

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=5e-36  Score=319.35  Aligned_cols=270  Identities=27%  Similarity=0.389  Sum_probs=200.6

Q ss_pred             cCCccccccCcCCcccEEEeEe-----cCcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeec--cee
Q 003786          475 ANFSTENKLGEGGFGPVYKGRL-----LNGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL--EEK  546 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~  546 (795)
                      ..|++.+.||+|+||.||+++.     .+++.||+|.+.... ....+.+.+|++++++++||||+++++++...  ...
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (284)
T cd05079           4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI   83 (284)
T ss_pred             hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence            3478889999999999999973     347889999986543 33346789999999999999999999998875  567


Q ss_pred             eEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          547 ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                      ++||||+++++|.+++...  ...+++..+..++.||+.||+|||+.+   |+||||||+||+++.++.+||+|||++..
T Consensus        84 ~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~i~~~i~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~~~l~dfg~~~~  158 (284)
T cd05079          84 KLIMEFLPSGSLKEYLPRN--KNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKA  158 (284)
T ss_pred             EEEEEccCCCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccchheEEEcCCCCEEECCCccccc
Confidence            8999999999999988432  235789999999999999999999988   99999999999999999999999999986


Q ss_pred             cCCCccc-ccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccc
Q 003786          627 FGGDELQ-SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWEL  705 (795)
Q Consensus       627 ~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  705 (795)
                      ....... .......++..|+|||.+.+..++.++|||||||++|||++++.|...........................
T Consensus       159 ~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
T cd05079         159 IETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRV  238 (284)
T ss_pred             cccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHH
Confidence            5432211 122234567789999999888899999999999999999998765432111000000000000000000000


Q ss_pred             cCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          706 IDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       706 id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      +............+..+.+++.+||+.+|++||++.++++.|+.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~  282 (284)
T cd05079         239 LEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEA  282 (284)
T ss_pred             HHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHh
Confidence            00000011112245678899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=7.1e-36  Score=327.06  Aligned_cols=260  Identities=28%  Similarity=0.385  Sum_probs=199.3

Q ss_pred             ccCCccccccCcCCcccEEEeEe------cCcceEEEEEecccCc-cchHHHHHHHHHHHhc-CCcccceeeeeeeec-c
Q 003786          474 TANFSTENKLGEGGFGPVYKGRL------LNGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKL-QHRNLVRLLGCCIEL-E  544 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~-~  544 (795)
                      .++|++.++||+|+||.||+|+.      .+++.||||++..... .....+.+|+.+|.++ +||||+++++++... .
T Consensus         6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~   85 (343)
T cd05103           6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG   85 (343)
T ss_pred             hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence            36799999999999999999963      3467899999965432 2345688999999999 689999999988654 4


Q ss_pred             eeeEEeecCCCCChhhhhhccCC---------------------------------------------------------
Q 003786          545 EKILIYEYMPNKSLDFFLFDSTK---------------------------------------------------------  567 (795)
Q Consensus       545 ~~~lv~E~~~~gsL~~~l~~~~~---------------------------------------------------------  567 (795)
                      ..++||||+++|+|.+++.....                                                         
T Consensus        86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (343)
T cd05103          86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE  165 (343)
T ss_pred             ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence            57899999999999988854211                                                         


Q ss_pred             -------cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcccccccccc
Q 003786          568 -------ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIV  640 (795)
Q Consensus       568 -------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~~~~~~  640 (795)
                             ...+++..+..++.||++||+|||+.+   |+||||||+|||++.++.+||+|||++................
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  242 (343)
T cd05103         166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDAR  242 (343)
T ss_pred             hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCC
Confidence                   123677788899999999999999988   9999999999999999999999999998653322212222234


Q ss_pred             cccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhhHHHH
Q 003786          641 GTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLIL  719 (795)
Q Consensus       641 gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~  719 (795)
                      +++.|+|||.+.+..++.++||||||+++|+|++ |..|++....... ....    .......         ..+....
T Consensus       243 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~-~~~~----~~~~~~~---------~~~~~~~  308 (343)
T cd05103         243 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-FCRR----LKEGTRM---------RAPDYTT  308 (343)
T ss_pred             CCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH-HHHH----HhccCCC---------CCCCCCC
Confidence            5678999999988899999999999999999997 8888765332211 1110    1111100         0011123


Q ss_pred             HHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          720 NRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       720 ~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                      ..+.+++..||+.+|++||++.||+++|+..
T Consensus       309 ~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~  339 (343)
T cd05103         309 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNL  339 (343)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            4678899999999999999999999999763

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=6.2e-36  Score=325.26  Aligned_cols=248  Identities=23%  Similarity=0.313  Sum_probs=194.2

Q ss_pred             cccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhc-CCcccceeeeeeeecceeeEEeecCCC
Q 003786          481 NKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEEKILIYEYMPN  555 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~  555 (795)
                      +.||+|+||.||+|+.. +++.||+|++.+..   ....+.+.+|+.++.++ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            46999999999999865 57889999997542   23345678899999888 699999999999999999999999999


Q ss_pred             CChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccccc
Q 003786          556 KSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK  635 (795)
Q Consensus       556 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~  635 (795)
                      ++|..++..   ...+++..+..++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+++......  ..
T Consensus        81 ~~L~~~~~~---~~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--~~  152 (327)
T cd05617          81 GDLMFHMQR---QRKLPEEHARFYAAEICIALNFLHERG---IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG--DT  152 (327)
T ss_pred             CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEeCCCCEEEeccccceeccCCC--Cc
Confidence            999888743   345899999999999999999999988   9999999999999999999999999987532111  12


Q ss_pred             ccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcc-hhHhHhHhhhccCcccccccCccccchh
Q 003786          636 TKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNS-LTLLGHAWDLWKDDRAWELIDPTLQNEA  714 (795)
Q Consensus       636 ~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~id~~l~~~~  714 (795)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ................          ..
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~----------~~  222 (327)
T cd05617         153 TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPI----------RI  222 (327)
T ss_pred             eecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCC----------CC
Confidence            334679999999999999999999999999999999999999996433211 1111111111111100          01


Q ss_pred             hHHHHHHHHHHHHhhccCCCCCCCCH------HHHHHH
Q 003786          715 SYLILNRYINVGLLCVQEDAADRPTM------FEVVSM  746 (795)
Q Consensus       715 ~~~~~~~l~~li~~cL~~dP~~RPt~------~evl~~  746 (795)
                      +......+.+++.+||+.||++||++      .+++++
T Consensus       223 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h  260 (327)
T cd05617         223 PRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSH  260 (327)
T ss_pred             CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcC
Confidence            11233456789999999999999984      577765

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=8.9e-36  Score=332.10  Aligned_cols=262  Identities=20%  Similarity=0.233  Sum_probs=199.0

Q ss_pred             ccCCccccccCcCCcccEEEeEec---CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL---NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      ..+|++.++||+|+||.||++...   .++.||+|.+...     ....+|+++|++++||||+++++++......++||
T Consensus        91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~  165 (392)
T PHA03207         91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM  165 (392)
T ss_pred             cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence            467999999999999999999643   3578999988542     34568999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      |++. ++|..++   .....+++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||++......
T Consensus       166 e~~~-~~l~~~l---~~~~~l~~~~~~~i~~ql~~aL~~LH~~g---ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~  238 (392)
T PHA03207        166 PKYK-CDLFTYV---DRSGPLPLEQAITIQRRLLEALAYLHGRG---IIHRDVKTENIFLDEPENAVLGDFGAACKLDAH  238 (392)
T ss_pred             hhcC-CCHHHHH---HhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEccCccccccCcc
Confidence            9986 5676666   23356899999999999999999999998   999999999999999999999999999866543


Q ss_pred             cccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcc-hhHhHhHhhhccCccc--cc---
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNS-LTLLGHAWDLWKDDRA--WE---  704 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~--~~---  704 (795)
                      ..........||+.|+|||++....++.++|||||||++|||++|+.||....... ...+............  ..   
T Consensus       239 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~  318 (392)
T PHA03207        239 PDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGS  318 (392)
T ss_pred             cccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccc
Confidence            33233334679999999999999999999999999999999999999986544221 1111110000000000  00   


Q ss_pred             --------ccCccccch--h-----hHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          705 --------LIDPTLQNE--A-----SYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       705 --------~id~~l~~~--~-----~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                              .........  .     .......+.++|.+||+.+|++||++.|++.+-
T Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p  376 (392)
T PHA03207        319 TNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLP  376 (392)
T ss_pred             hhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCc
Confidence                    000000000  0     011234677899999999999999999999874

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=3.6e-36  Score=331.69  Aligned_cols=253  Identities=23%  Similarity=0.312  Sum_probs=197.0

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      ++|++.+.||+|+||.||+++.. +++.||||++.+..   ......+.+|+.++..++||||+++++.+.+.+..++||
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~   80 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM   80 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            46889999999999999999865 58899999996532   233467888999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      ||+++|+|.+++..   ...+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||++......
T Consensus        81 E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~~L~~lH~~g---ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~  154 (360)
T cd05627          81 EFLPGGDMMTLLMK---KDTLSEEATQFYIAETVLAIDAIHQLG---FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKA  154 (360)
T ss_pred             eCCCCccHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEeeccCCcccccc
Confidence            99999999998843   345889999999999999999999998   999999999999999999999999998754221


Q ss_pred             cc---------------------------------cccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCC
Q 003786          631 EL---------------------------------QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKR  677 (795)
Q Consensus       631 ~~---------------------------------~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~  677 (795)
                      ..                                 .......+||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~  234 (360)
T cd05627         155 HRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP  234 (360)
T ss_pred             cccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCC
Confidence            00                                 000123579999999999999999999999999999999999999


Q ss_pred             CCCCCCCcchhHhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCC---HHHHHHH
Q 003786          678 NTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPT---MFEVVSM  746 (795)
Q Consensus       678 p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt---~~evl~~  746 (795)
                      ||........  ..... .+.. ..  .+.+.      ......+.+++.+++. +|++|++   +.|+++|
T Consensus       235 Pf~~~~~~~~--~~~i~-~~~~-~~--~~p~~------~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~h  293 (360)
T cd05627         235 PFCSETPQET--YRKVM-NWKE-TL--VFPPE------VPISEKAKDLILRFCT-DSENRIGSNGVEEIKSH  293 (360)
T ss_pred             CCCCCCHHHH--HHHHH-cCCC-ce--ecCCC------CCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcC
Confidence            9975432221  11100 0000 00  00110      0123456677877764 9999985   6777776

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=1.7e-35  Score=314.15  Aligned_cols=246  Identities=22%  Similarity=0.312  Sum_probs=192.4

Q ss_pred             cCcCCcccEEEeEec-CcceEEEEEecccCc---cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCCCCCh
Q 003786          483 LGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG---QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSL  558 (795)
Q Consensus       483 LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL  558 (795)
                      ||+|+||.||+++.. +|+.||+|++.....   .....+..|++++++++||||+++++.+.+....++||||+++++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            799999999999865 589999999864321   2234556799999999999999999999999999999999999999


Q ss_pred             hhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcccccccc
Q 003786          559 DFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKR  638 (795)
Q Consensus       559 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~~~~  638 (795)
                      .+++.... ...+++..+..++.||+.||+|||+.+   |+||||||+||+++.++.+||+|||++.......   ....
T Consensus        81 ~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~---~~~~  153 (277)
T cd05607          81 KYHIYNVG-ERGLEMERVIHYSAQITCGILHLHSMD---IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK---TITQ  153 (277)
T ss_pred             HHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHHCC---EEEccCChHhEEEcCCCCEEEeeceeeeecCCCc---eeec
Confidence            88875432 234788889999999999999999988   9999999999999999999999999998654322   1223


Q ss_pred             cccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhhHHH
Q 003786          639 IVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLI  718 (795)
Q Consensus       639 ~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~  718 (795)
                      ..|+..|+|||++.+..++.++|||||||++|||++|+.|+......... ......... ..    +..     .....
T Consensus       154 ~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~-~~~~~~~~~-~~----~~~-----~~~~~  222 (277)
T cd05607         154 RAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAK-EELKRRTLE-DE----VKF-----EHQNF  222 (277)
T ss_pred             cCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhH-HHHHHHhhc-cc----ccc-----ccccC
Confidence            56899999999999888999999999999999999999998643321111 000001000 00    000     01123


Q ss_pred             HHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          719 LNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       719 ~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ...+.+++.+||+.||++||++.|+++.
T Consensus       223 ~~~~~~li~~~L~~~P~~R~~~~~~~~~  250 (277)
T cd05607         223 TEESKDICRLFLAKKPEDRLGSREKNDD  250 (277)
T ss_pred             CHHHHHHHHHHhccCHhhCCCCccchhh
Confidence            4567899999999999999999776643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=1.1e-35  Score=311.10  Aligned_cols=250  Identities=28%  Similarity=0.405  Sum_probs=204.2

Q ss_pred             CCccccccCcCCcccEEEeEec-CcceEEEEEeccc--CccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQ--SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      +|++.+.||+|++|.||+|+.. +++.|++|.+...  .....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY   80 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence            4788899999999999999865 5889999998643  234456788999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      +++++|.+++... ....+++..+..++.|++.||.|||+.+   |+|+||||+||+++.++.+||+|||++........
T Consensus        81 ~~~~~L~~~l~~~-~~~~~~~~~~~~i~~~l~~al~~lH~~~---i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~  156 (256)
T cd08529          81 AENGDLHKLLKMQ-RGRPLPEDQVWRFFIQILLGLAHLHSKK---ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN  156 (256)
T ss_pred             CCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEeCCCCEEEcccccceeccCccc
Confidence            9999999998653 2346888899999999999999999987   99999999999999999999999999886643321


Q ss_pred             cccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccc
Q 003786          633 QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQN  712 (795)
Q Consensus       633 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~  712 (795)
                        ......|++.|+|||++.+..++.++|+|||||++++|++|+.|+.......  .....    ....         ..
T Consensus       157 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~----~~~~---------~~  219 (256)
T cd08529         157 --FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA--LILKI----IRGV---------FP  219 (256)
T ss_pred             --hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH--HHHHH----HcCC---------CC
Confidence              2233568899999999999899999999999999999999999986544211  11110    0000         01


Q ss_pred             hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          713 EASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       713 ~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .........+.+++.+||+.+|++||++.+++++
T Consensus       220 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  253 (256)
T cd08529         220 PVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN  253 (256)
T ss_pred             CCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence            1122345678899999999999999999999874

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.1e-36  Score=300.04  Aligned_cols=267  Identities=24%  Similarity=0.267  Sum_probs=212.9

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHH---HHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEE---FKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~---~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      -++|...+.||+|.||+|.+++.+ +++-+|||++++.......+   -..|-++|+..+||++..|...|+..+.+++|
T Consensus       167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV  246 (516)
T KOG0690|consen  167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV  246 (516)
T ss_pred             cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence            478999999999999999999865 58999999998865444433   45799999999999999999999999999999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      |||..||.|..+|   .+...+++..+..+-.+|..||.|||+.+   ||+||||.+|+|+|++|++||+|||+++.-  
T Consensus       247 MeyanGGeLf~HL---srer~FsE~RtRFYGaEIvsAL~YLHs~~---ivYRDlKLENLlLDkDGHIKitDFGLCKE~--  318 (516)
T KOG0690|consen  247 MEYANGGELFFHL---SRERVFSEDRTRFYGAEIVSALGYLHSRN---IVYRDLKLENLLLDKDGHIKITDFGLCKEE--  318 (516)
T ss_pred             EEEccCceEeeeh---hhhhcccchhhhhhhHHHHHHhhhhhhCC---eeeeechhhhheeccCCceEeeecccchhc--
Confidence            9999999999888   45667899999999999999999999987   999999999999999999999999999852  


Q ss_pred             CcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcc
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT  709 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~  709 (795)
                      -..-..+++++|||+|+|||++....|+.++|+|.+||++|||++|+.||-..+.....-+.....    -         
T Consensus       319 I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed----~---------  385 (516)
T KOG0690|consen  319 IKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMED----L---------  385 (516)
T ss_pred             ccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhh----c---------
Confidence            122245677999999999999999999999999999999999999999996554333221211111    0         


Q ss_pred             ccchhhHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHHHcc--------ccCCCCCCCCCCccc
Q 003786          710 LQNEASYLILNRYINVGLLCVQEDAADRP-----TMFEVVSMLTN--------KTINLPHPRQPAFSS  764 (795)
Q Consensus       710 l~~~~~~~~~~~l~~li~~cL~~dP~~RP-----t~~evl~~L~~--------~~~~l~~p~~p~~~~  764 (795)
                         ..+.....+...|+...|..||.+|.     .+.||.++-=.        ....+++|..|..-+
T Consensus       386 ---kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~~~~~Kki~PPfKPqVtS  450 (516)
T KOG0690|consen  386 ---KFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWEATYRKKIEPPFKPQVTS  450 (516)
T ss_pred             ---cCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHHHHHHhccCCCCCCCccc
Confidence               12222334566788889999999996     45566554211        123466676665433

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=100.00  E-value=9.3e-36  Score=322.14  Aligned_cols=260  Identities=27%  Similarity=0.385  Sum_probs=203.1

Q ss_pred             ccCCccccccCcCCcccEEEeEec--------CcceEEEEEecccC-ccchHHHHHHHHHHHhc-CCcccceeeeeeeec
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL--------NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIEL  543 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~  543 (795)
                      .++|.+.++||+|+||.||+++..        ....+|+|.+.... .....++.+|+++++++ +||||+++++++.+.
T Consensus        11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~   90 (314)
T cd05099          11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE   90 (314)
T ss_pred             HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence            367889999999999999999742        24569999886532 23356788999999999 699999999999999


Q ss_pred             ceeeEEeecCCCCChhhhhhccC-------------CcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEE
Q 003786          544 EEKILIYEYMPNKSLDFFLFDST-------------KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILL  610 (795)
Q Consensus       544 ~~~~lv~E~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll  610 (795)
                      ...++||||+++++|.+++....             ....+++..+..++.||+.||.|||+.+   |+||||||+|||+
T Consensus        91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill  167 (314)
T cd05099          91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR---CIHRDLAARNVLV  167 (314)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeeccccceeEEE
Confidence            99999999999999999986432             1245788889999999999999999988   9999999999999


Q ss_pred             CCCCCeeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhH
Q 003786          611 DKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTL  689 (795)
Q Consensus       611 ~~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~  689 (795)
                      +.++.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |..|+.......  .
T Consensus       168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~--~  245 (314)
T cd05099         168 TEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEE--L  245 (314)
T ss_pred             cCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHH--H
Confidence            9999999999999986543222111222234568999999998899999999999999999999 788875433211  1


Q ss_pred             hHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcccc
Q 003786          690 LGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKT  751 (795)
Q Consensus       690 ~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~  751 (795)
                      ....    ......         ..+...+..+.+++.+||+.+|++||++.|+++.|....
T Consensus       246 ~~~~----~~~~~~---------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~  294 (314)
T cd05099         246 FKLL----REGHRM---------DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVL  294 (314)
T ss_pred             HHHH----HcCCCC---------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence            1111    111110         111223446778999999999999999999999987743

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=7.6e-36  Score=324.41  Aligned_cols=237  Identities=22%  Similarity=0.281  Sum_probs=187.2

Q ss_pred             cccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHH-HHHhcCCcccceeeeeeeecceeeEEeecCCC
Q 003786          481 NKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIK-LIAKLQHRNLVRLLGCCIELEEKILIYEYMPN  555 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~  555 (795)
                      +.||+|+||.||+++.. +|+.+|||++.+..   ......+..|.. +++.++||||+++++.+...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            46999999999999864 58999999996542   223344555655 46779999999999999999999999999999


Q ss_pred             CChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccccc
Q 003786          556 KSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK  635 (795)
Q Consensus       556 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~  635 (795)
                      ++|..++.   +...+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+++......  ..
T Consensus        81 ~~L~~~l~---~~~~~~~~~~~~~~~qi~~al~~lH~~g---ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~--~~  152 (325)
T cd05604          81 GELFFHLQ---RERSFPEPRARFYAAEIASALGYLHSIN---IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQS--DT  152 (325)
T ss_pred             CCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEeecCCcccCCCCC--CC
Confidence            99988874   3345889999999999999999999988   9999999999999999999999999987532211  12


Q ss_pred             ccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhh
Q 003786          636 TKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEAS  715 (795)
Q Consensus       636 ~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~  715 (795)
                      .....||+.|+|||++.+..++.++|||||||++|||++|..||...+....  ...   ... ...  .+        .
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~--~~~---~~~-~~~--~~--------~  216 (325)
T cd05604         153 TTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEM--YDN---ILH-KPL--VL--------R  216 (325)
T ss_pred             cccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHH--HHH---HHc-CCc--cC--------C
Confidence            3346799999999999999999999999999999999999999865432211  111   000 000  01        1


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCHH
Q 003786          716 YLILNRYINVGLLCVQEDAADRPTMF  741 (795)
Q Consensus       716 ~~~~~~l~~li~~cL~~dP~~RPt~~  741 (795)
                      +.....+.+++.+||+.+|++||++.
T Consensus       217 ~~~~~~~~~ll~~ll~~~p~~R~~~~  242 (325)
T cd05604         217 PGASLTAWSILEELLEKDRQRRLGAK  242 (325)
T ss_pred             CCCCHHHHHHHHHHhccCHHhcCCCC
Confidence            11334677899999999999999885

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=100.00  E-value=1.6e-35  Score=308.92  Aligned_cols=247  Identities=27%  Similarity=0.379  Sum_probs=197.1

Q ss_pred             cccCcCCcccEEEeEecCcceEEEEEecccCc-cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCCCCChh
Q 003786          481 NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLD  559 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL~  559 (795)
                      ++||+|+||.||+|...+++.+|+|++..... .....+.+|++++++++||||+++++++......++||||+++++|.
T Consensus         1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   80 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL   80 (250)
T ss_pred             CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence            36999999999999988889999999875432 23456889999999999999999999999999999999999999999


Q ss_pred             hhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccccccccc
Q 003786          560 FFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRI  639 (795)
Q Consensus       560 ~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~~~~~  639 (795)
                      +++...  ...+++..+..++.|++++|.|||+.+   ++||||||+||+++.++.+||+|||++......... .....
T Consensus        81 ~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~-~~~~~  154 (250)
T cd05085          81 SFLRKK--KDELKTKQLVKFALDAAAGMAYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYS-SSGLK  154 (250)
T ss_pred             HHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccChheEEEcCCCeEEECCCccceeccccccc-cCCCC
Confidence            988533  234788999999999999999999988   999999999999999999999999998754322211 11122


Q ss_pred             ccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhhHHH
Q 003786          640 VGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLI  718 (795)
Q Consensus       640 ~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~  718 (795)
                      .+++.|+|||++....++.++|||||||++|+|++ |..||........  ....    .....         ...+...
T Consensus       155 ~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~--~~~~----~~~~~---------~~~~~~~  219 (250)
T cd05085         155 QIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQA--REQV----EKGYR---------MSCPQKC  219 (250)
T ss_pred             CCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHH--HHHH----HcCCC---------CCCCCCC
Confidence            34678999999988889999999999999999998 8888864332111  1111    11100         0111223


Q ss_pred             HHHHHHHHHhhccCCCCCCCCHHHHHHHHc
Q 003786          719 LNRYINVGLLCVQEDAADRPTMFEVVSMLT  748 (795)
Q Consensus       719 ~~~l~~li~~cL~~dP~~RPt~~evl~~L~  748 (795)
                      +..+.+++.+|++.+|++||++.|+++.|.
T Consensus       220 ~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         220 PDDVYKVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             CHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence            457889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=4.3e-36  Score=332.65  Aligned_cols=261  Identities=21%  Similarity=0.279  Sum_probs=196.9

Q ss_pred             CCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecc-----eee
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELE-----EKI  547 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~  547 (795)
                      +|++.++||+|+||.||+++.. +++.||||++....  ....+++.+|+++|+.++||||+++++++...+     ..+
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   80 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY   80 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence            4788999999999999999864 68999999986532  233467889999999999999999999998776     789


Q ss_pred             EEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccccc
Q 003786          548 LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF  627 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~  627 (795)
                      +|+||+.+ +|...+.   ....+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+++..
T Consensus        81 lv~e~~~~-~l~~~~~---~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~  153 (372)
T cd07853          81 VVTELMQS-DLHKIIV---SPQPLSSDHVKVFLYQILRGLKYLHSAG---ILHRDIKPGNLLVNSNCVLKICDFGLARVE  153 (372)
T ss_pred             EEeecccc-CHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHHEEECCCCCEEeccccceeec
Confidence            99999974 6666663   2345889999999999999999999998   999999999999999999999999999865


Q ss_pred             CCCccccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccc---
Q 003786          628 GGDELQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAW---  703 (795)
Q Consensus       628 ~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~---  703 (795)
                      ..... .......+++.|+|||++.+ ..++.++|||||||++|||++|+.||...+....  ..............   
T Consensus       154 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~i~~~~g~~~~~~~~  230 (372)
T cd07853         154 EPDES-KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQ--LDLITDLLGTPSLEAMR  230 (372)
T ss_pred             ccCcc-ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHH--HHHHHHHcCCCCHHHHH
Confidence            43221 11223467899999998876 4589999999999999999999999976542211  11000000000000   


Q ss_pred             -------c-ccCcccc-c------hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          704 -------E-LIDPTLQ-N------EASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       704 -------~-~id~~l~-~------~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                             . +...... .      .........+.+++.+||+.||++|||+.|++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  288 (372)
T cd07853         231 SACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH  288 (372)
T ss_pred             HhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence                   0 0000000 0      0111224567899999999999999999999986

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=1e-35  Score=322.91  Aligned_cols=237  Identities=23%  Similarity=0.279  Sum_probs=186.8

Q ss_pred             cccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHH-HHHhcCCcccceeeeeeeecceeeEEeecCCC
Q 003786          481 NKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIK-LIAKLQHRNLVRLLGCCIELEEKILIYEYMPN  555 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~  555 (795)
                      +.||+|+||.||+|+.. +++.||+|++.+..   ......+.+|.. +++.++||||+++++.+.+.+..++||||+++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            46999999999999875 58899999986532   122334555554 67889999999999999999999999999999


Q ss_pred             CChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccccc
Q 003786          556 KSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK  635 (795)
Q Consensus       556 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~  635 (795)
                      ++|...+..   ...+++..+..++.||+.||.|||+.+   |+||||||+||+++.++.+||+|||+++......  ..
T Consensus        81 ~~L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~--~~  152 (321)
T cd05603          81 GELFFHLQR---ERCFLEPRARFYAAEVASAIGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE--ET  152 (321)
T ss_pred             CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEccCCCCccCCCCC--Cc
Confidence            999887743   345788899999999999999999988   9999999999999999999999999987532221  22


Q ss_pred             ccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhh
Q 003786          636 TKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEAS  715 (795)
Q Consensus       636 ~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~  715 (795)
                      .....||+.|+|||.+.+..++.++|||||||++|||++|..||...+....  ..   .... ..          ...+
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~---~i~~-~~----------~~~~  216 (321)
T cd05603         153 TSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQM--YD---NILH-KP----------LQLP  216 (321)
T ss_pred             cccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHH--HH---HHhc-CC----------CCCC
Confidence            3446799999999999988999999999999999999999999865432111  11   1111 00          0111


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCHH
Q 003786          716 YLILNRYINVGLLCVQEDAADRPTMF  741 (795)
Q Consensus       716 ~~~~~~l~~li~~cL~~dP~~RPt~~  741 (795)
                      ......+.+++.+||+.+|.+||++.
T Consensus       217 ~~~~~~~~~li~~~l~~~p~~R~~~~  242 (321)
T cd05603         217 GGKTVAACDLLVGLLHKDQRRRLGAK  242 (321)
T ss_pred             CCCCHHHHHHHHHHccCCHhhcCCCC
Confidence            22345678899999999999999764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=9.9e-36  Score=328.15  Aligned_cols=262  Identities=22%  Similarity=0.230  Sum_probs=196.8

Q ss_pred             HHccCCccccccCcCCcccEEEeEec-CcceEEEEEeccc--CccchHHHHHHHHHHHhcCCcccceeeeeeeecc----
Q 003786          472 AATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQ--SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELE----  544 (795)
Q Consensus       472 ~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----  544 (795)
                      ...++|++.+.||+|+||.||+++.. +++.||||++...  .......+.+|+.+++.++||||+++++++....    
T Consensus        18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~   97 (359)
T cd07876          18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE   97 (359)
T ss_pred             hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence            34588999999999999999999864 5889999998653  2234567889999999999999999999986543    


Q ss_pred             --eeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccc
Q 003786          545 --EKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFG  622 (795)
Q Consensus       545 --~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFG  622 (795)
                        ..++||||++++ |...+.     ..+++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||
T Consensus        98 ~~~~~lv~e~~~~~-l~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~~---ivHrDlkp~NIl~~~~~~~kl~Dfg  168 (359)
T cd07876          98 FQDVYLVMELMDAN-LCQVIH-----MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG  168 (359)
T ss_pred             cceeEEEEeCCCcC-HHHHHh-----ccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEecCC
Confidence              468999999865 444442     23678889999999999999999998   9999999999999999999999999


Q ss_pred             cccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhc-----
Q 003786          623 MARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLW-----  697 (795)
Q Consensus       623 la~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~-----  697 (795)
                      +++......   ......||+.|+|||.+.+..++.++|||||||++|+|++|+.||...+....  ........     
T Consensus       169 ~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~--~~~~~~~~~~~~~  243 (359)
T cd07876         169 LARTACTNF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQ--WNKVIEQLGTPSA  243 (359)
T ss_pred             CccccccCc---cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHhcCCCcH
Confidence            997543221   22335789999999999999999999999999999999999999975432111  00000000     


Q ss_pred             --------------cCc------ccccccCcccc---chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          698 --------------KDD------RAWELIDPTLQ---NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       698 --------------~~~------~~~~~id~~l~---~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                                    ...      ...+.......   ..........+.+++.+||+.||++|||+.|++++-
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp  316 (359)
T cd07876         244 EFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHP  316 (359)
T ss_pred             HHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCc
Confidence                          000      00000000000   001112235678999999999999999999999863

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=7.2e-36  Score=317.61  Aligned_cols=270  Identities=28%  Similarity=0.412  Sum_probs=204.1

Q ss_pred             cCCccccccCcCCcccEEEeEec-----CcceEEEEEecccCcc-chHHHHHHHHHHHhcCCcccceeeeeeee--ccee
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-----NGQEVAVKRLSSQSGQ-GQEEFKNEIKLIAKLQHRNLVRLLGCCIE--LEEK  546 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~  546 (795)
                      .+|++.+.||+|+||.||+++..     .++.+|||++...... ..+.+.+|++++++++||||+++++++..  ....
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~   83 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL   83 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence            46788899999999999999853     3678999999765433 46789999999999999999999999887  5578


Q ss_pred             eEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          547 ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                      ++||||+++++|.+++....  ..+++..+..++.|++.||.|||+.+   |+|+||||+||+++.++.+||+|||++..
T Consensus        84 ~lv~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~  158 (284)
T cd05038          84 RLIMEYLPSGSLRDYLQRHR--DQINLKRLLLFSSQICKGMDYLGSQR---YIHRDLAARNILVESEDLVKISDFGLAKV  158 (284)
T ss_pred             EEEEecCCCCCHHHHHHhCc--cccCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccccccc
Confidence            99999999999999985432  25888999999999999999999988   99999999999999999999999999987


Q ss_pred             cCCCcc-cccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccc
Q 003786          627 FGGDEL-QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWEL  705 (795)
Q Consensus       627 ~~~~~~-~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  705 (795)
                      ...... ........++..|+|||.+....++.++||||||++++||++|+.|+........................+.
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
T cd05038         159 LPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLEL  238 (284)
T ss_pred             cccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHH
Confidence            652221 1111123445679999999888899999999999999999999988754322211100000000000000011


Q ss_pred             cCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          706 IDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       706 id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      +........+...+..+.+++.+||+.+|++||++.||+++|+.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~  282 (284)
T cd05038         239 LKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDR  282 (284)
T ss_pred             HHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhh
Confidence            11111111122334678899999999999999999999999976

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=1.7e-35  Score=315.63  Aligned_cols=261  Identities=26%  Similarity=0.362  Sum_probs=194.7

Q ss_pred             CCccccccCcCCcccEEEeEec-CcceEEEEEecccCc--cchHHHHHHHHHHHhc---CCcccceeeeeeee-----cc
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG--QGQEEFKNEIKLIAKL---QHRNLVRLLGCCIE-----LE  544 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~-----~~  544 (795)
                      +|++.+.||+|+||.||+|+.. +++.||+|.+.....  .....+.+|+.+++.+   +||||+++++++..     ..
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~   80 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET   80 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence            5888999999999999999865 588999999865422  2234566787777765   69999999998764     34


Q ss_pred             eeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccc
Q 003786          545 EKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMA  624 (795)
Q Consensus       545 ~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla  624 (795)
                      ..++||||+++ +|..++.... ...+++..+..++.||+.||.|||+.+   |+||||||+||+++.++.+||+|||++
T Consensus        81 ~~~lv~e~~~~-~l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~kl~dfg~~  155 (288)
T cd07863          81 KVTLVFEHVDQ-DLRTYLDKVP-PPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGQVKLADFGLA  155 (288)
T ss_pred             eEEEEEccccc-CHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccCcc
Confidence            57899999985 7777764322 244889999999999999999999998   999999999999999999999999999


Q ss_pred             cccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhc---cCcc
Q 003786          625 RIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLW---KDDR  701 (795)
Q Consensus       625 ~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~---~~~~  701 (795)
                      .......   ......|+..|+|||++.+..++.++|||||||++|+|++|++||........  ........   ....
T Consensus       156 ~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~--~~~~~~~~~~~~~~~  230 (288)
T cd07863         156 RIYSCQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ--LGKIFDLIGLPPEDD  230 (288)
T ss_pred             ccccCcc---cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHH--HHHHHHHhCCCChhh
Confidence            8664322   12335689999999999888999999999999999999999999865432211  11110000   0000


Q ss_pred             ccc-------ccCccc---cchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          702 AWE-------LIDPTL---QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       702 ~~~-------~id~~l---~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ...       ...+..   ...........+.+++.+||+.||++|||+.|++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h  285 (288)
T cd07863         231 WPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH  285 (288)
T ss_pred             CcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence            000       000000   011222345667899999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.9e-35  Score=308.63  Aligned_cols=248  Identities=30%  Similarity=0.430  Sum_probs=197.6

Q ss_pred             cccCcCCcccEEEeEecCcceEEEEEecccCcc-chHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCCCCChh
Q 003786          481 NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQ-GQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLD  559 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL~  559 (795)
                      ++||+|+||.||++...+++.||+|++...... ..+.+.+|++++++++||||+++++++.+....++||||+++++|.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~   80 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL   80 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence            479999999999999767999999998765433 4568899999999999999999999999999999999999999999


Q ss_pred             hhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccccccccc
Q 003786          560 FFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRI  639 (795)
Q Consensus       560 ~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~~~~~  639 (795)
                      +++...  ...+++..+..++.+++++|.|||+.+   ++||||||+||+++.++.+||+|||++...............
T Consensus        81 ~~l~~~--~~~~~~~~~~~~~~~~~~~l~~lH~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~  155 (251)
T cd05041          81 TFLRKK--KNRLTVKKLLQMSLDAAAGMEYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLK  155 (251)
T ss_pred             HHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---EehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccC
Confidence            988543  234778889999999999999999988   999999999999999999999999999865422211111222


Q ss_pred             ccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhhHHH
Q 003786          640 VGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLI  718 (795)
Q Consensus       640 ~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~  718 (795)
                      .++..|+|||.+.+..++.++|+|||||++|||++ |..|+........  ...    .....         ....+...
T Consensus       156 ~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~--~~~----~~~~~---------~~~~~~~~  220 (251)
T cd05041         156 QIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQT--RER----IESGY---------RMPAPQLC  220 (251)
T ss_pred             cceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHH--HHH----HhcCC---------CCCCCccC
Confidence            34667999999988899999999999999999999 7777754332111  111    00000         00112223


Q ss_pred             HHHHHHHHHhhccCCCCCCCCHHHHHHHHc
Q 003786          719 LNRYINVGLLCVQEDAADRPTMFEVVSMLT  748 (795)
Q Consensus       719 ~~~l~~li~~cL~~dP~~RPt~~evl~~L~  748 (795)
                      +..+.+++.+|++.+|++||++.||++.|.
T Consensus       221 ~~~~~~li~~~l~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         221 PEEIYRLMLQCWAYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             CHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence            457889999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=100.00  E-value=2.7e-35  Score=311.05  Aligned_cols=254  Identities=27%  Similarity=0.389  Sum_probs=192.0

Q ss_pred             cccCcCCcccEEEeEecC---cceEEEEEecccCc-cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCCCC
Q 003786          481 NKLGEGGFGPVYKGRLLN---GQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNK  556 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g  556 (795)
                      +.||+|+||.||+|...+   +..+|+|.+..... .....+.+|+.++++++||||+++++++.+....++||||++++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG   80 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence            469999999999997543   45799998865432 33457889999999999999999999999999999999999999


Q ss_pred             ChhhhhhccCC--cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcccc
Q 003786          557 SLDFFLFDSTK--ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQS  634 (795)
Q Consensus       557 sL~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~  634 (795)
                      +|.+++.....  ....++..+..++.|++.||.|||+.+   ++||||||+||+++.++.+||+|||++..........
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~  157 (269)
T cd05087          81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN---FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV  157 (269)
T ss_pred             cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence            99999864332  234566777889999999999999988   9999999999999999999999999997543332222


Q ss_pred             cccccccccccccccccccC-------CCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCccccccc
Q 003786          635 KTKRIVGTYGYMSPEYAQQG-------LFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELI  706 (795)
Q Consensus       635 ~~~~~~gt~~y~APE~~~~~-------~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i  706 (795)
                      ......++..|+|||++.+.       .++.++|||||||++|||++ |+.||.........  ....   . .......
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~--~~~~---~-~~~~~~~  231 (269)
T cd05087         158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVL--TYTV---R-EQQLKLP  231 (269)
T ss_pred             cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHH--HHHh---h-cccCCCC
Confidence            22335678899999988542       35889999999999999996 99898654332211  1110   0 1111111


Q ss_pred             CccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHc
Q 003786          707 DPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT  748 (795)
Q Consensus       707 d~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~  748 (795)
                      ++.+..    .....+.+++..|+ .+|++|||++||++.|+
T Consensus       232 ~~~~~~----~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         232 KPRLKL----PLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             CCccCC----CCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence            222111    12345677888998 58999999999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=5.6e-36  Score=313.99  Aligned_cols=252  Identities=31%  Similarity=0.447  Sum_probs=199.8

Q ss_pred             CccccccCcCCcccEEEeEecC-cceEEEEEecccCccchH--HHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecC
Q 003786          477 FSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQE--EFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYM  553 (795)
Q Consensus       477 ~~~~~~LG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~--~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  553 (795)
                      |++++.||+|+||.||+++... ++.+|+|++.........  ...+|+.++++++||||+++++++.+....++||||+
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~   80 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC   80 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            6788999999999999998765 678999999766433322  3456999999999999999999999999999999999


Q ss_pred             CCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccc
Q 003786          554 PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ  633 (795)
Q Consensus       554 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~  633 (795)
                      ++++|.+++.   ....+++..+..++.||++||.+||+.+   |+|+||||+||+++.++.++|+|||.+.....  ..
T Consensus        81 ~~~~L~~~l~---~~~~~~~~~~~~~~~qi~~~L~~Lh~~~---i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~--~~  152 (260)
T PF00069_consen   81 PGGSLQDYLQ---KNKPLSEEEILKIAYQILEALAYLHSKG---IVHRDIKPENILLDENGEVKLIDFGSSVKLSE--NN  152 (260)
T ss_dssp             TTEBHHHHHH---HHSSBBHHHHHHHHHHHHHHHHHHHHTT---EEESSBSGGGEEESTTSEEEESSGTTTEESTS--TT
T ss_pred             cccccccccc---cccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccc--cc
Confidence            9999999985   4456889999999999999999999998   99999999999999999999999999976411  12


Q ss_pred             ccccccccccccccccccc-cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcch-hHhHhHhhhccCcccccccCcccc
Q 003786          634 SKTKRIVGTYGYMSPEYAQ-QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSL-TLLGHAWDLWKDDRAWELIDPTLQ  711 (795)
Q Consensus       634 ~~~~~~~gt~~y~APE~~~-~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~id~~l~  711 (795)
                      .......++..|+|||++. +..++.++||||||+++++|++|..|+........ ........   .. ..   .. . 
T Consensus       153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~---~~-~~---~~-~-  223 (260)
T PF00069_consen  153 ENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILK---RP-LP---SS-S-  223 (260)
T ss_dssp             SEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHH---TH-HH---HH-T-
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccc---cc-cc---cc-c-
Confidence            2344567899999999998 78899999999999999999999999875421111 11100000   00 00   00 0 


Q ss_pred             chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          712 NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       712 ~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                       .........+.+++.+||+.+|++||++.+++++
T Consensus       224 -~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~  257 (260)
T PF00069_consen  224 -QQSREKSEELRDLIKKMLSKDPEQRPSAEELLKH  257 (260)
T ss_dssp             -TSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred             -cccchhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence             0000012678899999999999999999999874

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=100.00  E-value=1.9e-35  Score=310.54  Aligned_cols=253  Identities=30%  Similarity=0.440  Sum_probs=201.4

Q ss_pred             cCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCC
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMP  554 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~  554 (795)
                      ++|++.++||+|++|.||+|+...+..+|+|++.... ...+.+.+|++++++++|||++++++++. ....++||||++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~   83 (260)
T cd05069           6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMG   83 (260)
T ss_pred             HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCC
Confidence            5688999999999999999988777789999886433 34567899999999999999999998875 456889999999


Q ss_pred             CCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcccc
Q 003786          555 NKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQS  634 (795)
Q Consensus       555 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~  634 (795)
                      +++|.+++... ....+++..+..++.|++.||.|||+.+   |+|+||||+||++++++.+||+|||++......... 
T Consensus        84 ~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~-  158 (260)
T cd05069          84 KGSLLDFLKEG-DGKYLKLPQLVDMAAQIADGMAYIERMN---YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYT-  158 (260)
T ss_pred             CCCHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCeEEECCCccceEccCCccc-
Confidence            99999988543 2344788899999999999999999988   999999999999999999999999999865433211 


Q ss_pred             cccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCccccch
Q 003786          635 KTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNE  713 (795)
Q Consensus       635 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~  713 (795)
                      ......++..|+|||.+.+..++.++|||||||++|||++ |..|+.......  .....    ....         ...
T Consensus       159 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~~----~~~~---------~~~  223 (260)
T cd05069         159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE--VLEQV----ERGY---------RMP  223 (260)
T ss_pred             ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHH----HcCC---------CCC
Confidence            1122346778999999988889999999999999999999 888876432211  11111    0000         001


Q ss_pred             hhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          714 ASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       714 ~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      .+...+..+.+++.+||+.+|++||++++|++.|+.
T Consensus       224 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         224 CPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             CCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            122344678899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=1.4e-35  Score=315.09  Aligned_cols=255  Identities=25%  Similarity=0.398  Sum_probs=199.3

Q ss_pred             ccCCccccccCcCCcccEEEeEec-Ccc----eEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQ----EVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKI  547 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  547 (795)
                      ..+|++.++||+|+||.||+|+.. +++    .||+|++.... ....+++.+|+.+++.++||||+++++++.. ...+
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~   84 (279)
T cd05109           6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQ   84 (279)
T ss_pred             hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcE
Confidence            367889999999999999999743 444    48999986543 2345678899999999999999999999875 4578


Q ss_pred             EEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccccc
Q 003786          548 LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF  627 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~  627 (795)
                      +++||+++|+|.+++...  ...+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++..
T Consensus        85 l~~~~~~~g~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~---iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~  159 (279)
T cd05109          85 LVTQLMPYGCLLDYVREN--KDRIGSQDLLNWCVQIAKGMSYLEEVR---LVHRDLAARNVLVKSPNHVKITDFGLARLL  159 (279)
T ss_pred             EEEEcCCCCCHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEcCCCcEEECCCCceeec
Confidence            999999999999988542  345889999999999999999999988   999999999999999999999999999876


Q ss_pred             CCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCccccccc
Q 003786          628 GGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELI  706 (795)
Q Consensus       628 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i  706 (795)
                      .............+++.|+|||.+.+..++.++|||||||++|||++ |..|+.......  ....    .......   
T Consensus       160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~----~~~~~~~---  230 (279)
T cd05109         160 DIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE--IPDL----LEKGERL---  230 (279)
T ss_pred             ccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHH----HHCCCcC---
Confidence            43322111222335678999999988899999999999999999998 888875432211  1111    1111100   


Q ss_pred             CccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          707 DPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       707 d~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                            ..+......+.+++.+||+.+|++||++.++++.|+.
T Consensus       231 ------~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~  267 (279)
T cd05109         231 ------PQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSR  267 (279)
T ss_pred             ------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence                  0111234467789999999999999999999998876

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=2.6e-35  Score=331.33  Aligned_cols=262  Identities=21%  Similarity=0.231  Sum_probs=195.7

Q ss_pred             HccCCccccccCcCCcccEEEeEecC-cceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      ....|.+.+.||+|+||.||++++.. ++.||||...      ...+.+|+++|++++|+|||++++++......++|||
T Consensus       167 ~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e  240 (461)
T PHA03211        167 AGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLP  240 (461)
T ss_pred             ccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEE
Confidence            35679999999999999999998754 7889999642      2346789999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      ++. ++|..++...  ...+++..+..++.||++||.|||+++   |+||||||+||||+.++.+||+|||+++......
T Consensus       241 ~~~-~~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~  314 (461)
T PHA03211        241 KYR-SDLYTYLGAR--LRPLGLAQVTAVARQLLSAIDYIHGEG---IIHRDIKTENVLVNGPEDICLGDFGAACFARGSW  314 (461)
T ss_pred             ccC-CCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---EEECcCCHHHEEECCCCCEEEcccCCceeccccc
Confidence            995 5776666432  235899999999999999999999988   9999999999999999999999999998764332


Q ss_pred             ccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCC-Cc-----chhHhHhHhh-hccCccccc
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSN-TN-----SLTLLGHAWD-LWKDDRAWE  704 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~-~~-----~~~~~~~~~~-~~~~~~~~~  704 (795)
                      .........||+.|+|||++.+..++.++|||||||+||||++|..++-... ..     ...+...... .........
T Consensus       315 ~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~  394 (461)
T PHA03211        315 STPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQ  394 (461)
T ss_pred             ccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCC
Confidence            2222234579999999999999999999999999999999999886653221 10     0111110000 000000000


Q ss_pred             cc----------------Cccccchhh---HHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          705 LI----------------DPTLQNEAS---YLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       705 ~i----------------d~~l~~~~~---~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ..                .+.......   ......+.+||.+||+.||++|||+.|+|++
T Consensus       395 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h  455 (461)
T PHA03211        395 HAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL  455 (461)
T ss_pred             CcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence            00                000000000   0122367789999999999999999999986

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=1.9e-35  Score=314.71  Aligned_cols=265  Identities=26%  Similarity=0.342  Sum_probs=199.4

Q ss_pred             CCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      +|++.+.||+|++|.||+|+.. +++.||||++....  ....+.+.+|+.++++++||||+++++++.++...++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF   80 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence            5788899999999999999865 58899999986432  22346788999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      ++ ++|..++........+++..+..++.||++||.|||+.+   |+||||||+||+++.++.+||+|||++....... 
T Consensus        81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~-  155 (285)
T cd07861          81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR---VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV-  155 (285)
T ss_pred             CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEEcCCCcEEECcccceeecCCCc-
Confidence            98 578777755444466899999999999999999999988   9999999999999999999999999997653221 


Q ss_pred             ccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHh-Hh-----hhccCcc---c
Q 003786          633 QSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGH-AW-----DLWKDDR---A  702 (795)
Q Consensus       633 ~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~-~~-----~~~~~~~---~  702 (795)
                       .......+++.|+|||++.+ ..++.++|||||||++|+|++|+.|+............. ..     ..|....   .
T Consensus       156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (285)
T cd07861         156 -RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPD  234 (285)
T ss_pred             -ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHH
Confidence             11223457889999998865 457899999999999999999999986543211110000 00     0000000   0


Q ss_pred             cc-ccCc---cccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          703 WE-LIDP---TLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       703 ~~-~id~---~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .. ....   ............++.+++.+||+.||++|||+.+|+++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~  282 (285)
T cd07861         235 YKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH  282 (285)
T ss_pred             HHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence            00 0000   00000111234567899999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=1.2e-35  Score=313.75  Aligned_cols=255  Identities=29%  Similarity=0.446  Sum_probs=200.3

Q ss_pred             cCCccccccCcCCcccEEEeEecC-c---ceEEEEEeccc-CccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLN-G---QEVAVKRLSSQ-SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~-~---~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      .+|++.+.||+|+||.||+|+... +   ..||||.+... .....+++..|+.++++++||||+++++++.++...++|
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv   83 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII   83 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence            457889999999999999998653 3   35999998654 233456899999999999999999999999999999999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      |||+++++|++++...  .+.+++..+..++.|++.||.|||+.+   ++|+||||+||+++.++.+||+|||++.....
T Consensus        84 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~~l~~al~~lH~~g---~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~  158 (269)
T cd05065          84 TEFMENGALDSFLRQN--DGQFTVIQLVGMLRGIAAGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLED  158 (269)
T ss_pred             EecCCCCcHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccChheEEEcCCCcEEECCCcccccccc
Confidence            9999999999988543  345788999999999999999999988   99999999999999999999999999876543


Q ss_pred             Cccccccc-ccc--cccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccc
Q 003786          630 DELQSKTK-RIV--GTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWEL  705 (795)
Q Consensus       630 ~~~~~~~~-~~~--gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  705 (795)
                      ........ ...  .+..|+|||.+....++.++|||||||++|||++ |..|+.......  ......   ...+    
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~--~~~~i~---~~~~----  229 (269)
T cd05065         159 DTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD--VINAIE---QDYR----  229 (269)
T ss_pred             CccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHH--HHHHHH---cCCc----
Confidence            22111111 111  2457999999998899999999999999999886 998886433211  111110   0000    


Q ss_pred             cCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          706 IDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       706 id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                            ...+...+..+.+++..||+.+|.+||++.+|+++|+.
T Consensus       230 ------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  267 (269)
T cd05065         230 ------LPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDK  267 (269)
T ss_pred             ------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence                  01112234567789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=1.9e-35  Score=320.05  Aligned_cols=198  Identities=27%  Similarity=0.410  Sum_probs=160.4

Q ss_pred             ccccCcCCcccEEEeEec---CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeee--cceeeEEeecCC
Q 003786          480 ENKLGEGGFGPVYKGRLL---NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIE--LEEKILIYEYMP  554 (795)
Q Consensus       480 ~~~LG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~E~~~  554 (795)
                      +++||+|+||.||+|+..   +++.+|+|.+...  .....+.+|+++|++++||||+++++++..  ....++||||+.
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE   83 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCC--CCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence            468999999999999864   4678999998643  234567899999999999999999998864  456789999987


Q ss_pred             CCChhhhhhccC------CcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEE----CCCCCeeeeccccc
Q 003786          555 NKSLDFFLFDST------KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILL----DKDMNPKISDFGMA  624 (795)
Q Consensus       555 ~gsL~~~l~~~~------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll----~~~~~vkL~DFGla  624 (795)
                      + +|..++....      ....+++..+..++.||+.||.|||+++   |+||||||+|||+    +..+.+||+|||++
T Consensus        84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a  159 (317)
T cd07868          84 H-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFA  159 (317)
T ss_pred             C-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence            5 6666553211      1235888899999999999999999998   9999999999999    45678999999999


Q ss_pred             cccCCCcc-ccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCC
Q 003786          625 RIFGGDEL-QSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSN  683 (795)
Q Consensus       625 ~~~~~~~~-~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~  683 (795)
                      +....... ........||+.|+|||++.+ ..++.++||||+||++|||++|++||....
T Consensus       160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~  220 (317)
T cd07868         160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ  220 (317)
T ss_pred             eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCc
Confidence            87643221 122334678999999998876 468999999999999999999999986543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.4e-36  Score=323.71  Aligned_cols=245  Identities=28%  Similarity=0.426  Sum_probs=205.4

Q ss_pred             ccCcCCcccEEEeEecC-cceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCCCCChhh
Q 003786          482 KLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDF  560 (795)
Q Consensus       482 ~LG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL~~  560 (795)
                      +||+|.||+||.|++.+ ...+|||.+........+-+..|+..-+.|+|.|||+++|.+.++...-+.||.+|||+|..
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs  661 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS  661 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence            69999999999999765 56799999988777777889999999999999999999999999999999999999999999


Q ss_pred             hhhccCCcccC--ChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECC-CCCeeeeccccccccCCCccccccc
Q 003786          561 FLFDSTKENLL--GWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDK-DMNPKISDFGMARIFGGDELQSKTK  637 (795)
Q Consensus       561 ~l~~~~~~~~l--~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~-~~~vkL~DFGla~~~~~~~~~~~~~  637 (795)
                      ++...-  +++  .+..+..+..||++||.|||+..   |||||||-+|+||+. .|.+||+|||.++.+.+-  ...+.
T Consensus       662 LLrskW--GPlKDNEstm~fYtkQILeGLkYLHen~---IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi--nP~TE  734 (1226)
T KOG4279|consen  662 LLRSKW--GPLKDNESTMNFYTKQILEGLKYLHENK---IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI--NPCTE  734 (1226)
T ss_pred             HHHhcc--CCCccchhHHHHHHHHHHHHhhhhhhcc---eeeccccCCcEEEeeccceEEecccccchhhccC--Ccccc
Confidence            995433  334  67788899999999999999987   999999999999964 688999999999876433  34567


Q ss_pred             ccccccccccccccccC--CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhh
Q 003786          638 RIVGTYGYMSPEYAQQG--LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEAS  715 (795)
Q Consensus       638 ~~~gt~~y~APE~~~~~--~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~  715 (795)
                      ++.||..|||||++..+  .|..++|||||||++.||.||++||--...++-...       +-+-      -+...+++
T Consensus       735 TFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMF-------kVGm------yKvHP~iP  801 (1226)
T KOG4279|consen  735 TFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMF-------KVGM------YKVHPPIP  801 (1226)
T ss_pred             ccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhh-------hhcc------eecCCCCc
Confidence            78999999999999765  589999999999999999999999954433322111       1110      01234567


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          716 YLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       716 ~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .+...+...+|.+|...+|.+||+++++++.
T Consensus       802 eelsaeak~FilrcFepd~~~R~sA~~LL~D  832 (1226)
T KOG4279|consen  802 EELSAEAKNFILRCFEPDPCDRPSAKDLLQD  832 (1226)
T ss_pred             HHHHHHHHHHHHHHcCCCcccCccHHHhccC
Confidence            7778889999999999999999999999973

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=2.9e-35  Score=317.40  Aligned_cols=264  Identities=23%  Similarity=0.309  Sum_probs=201.5

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      ++|++.++||+|+||.||+++.. +++.+|+|.+.... ....+++.+|++++++++||||+++++++.+++..++||||
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey   80 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH   80 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence            36899999999999999999865 57889999886542 22345688999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      +++++|.+++...   ..+++..+..++.||++||.|||+..  +++||||||+|||++.++.+||+|||++......  
T Consensus        81 ~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~--  153 (308)
T cd06615          81 MDGGSLDQVLKKA---GRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--  153 (308)
T ss_pred             cCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCccccccc--
Confidence            9999999998533   45788999999999999999999742  3999999999999999999999999998754322  


Q ss_pred             cccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHh-HhhhccCcc----------
Q 003786          633 QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGH-AWDLWKDDR----------  701 (795)
Q Consensus       633 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~-~~~~~~~~~----------  701 (795)
                        ......|+..|+|||.+.+..++.++|||||||++|+|++|+.|+............. .........          
T Consensus       154 --~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (308)
T cd06615         154 --MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPP  231 (308)
T ss_pred             --ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCC
Confidence              1234578999999999988889999999999999999999999986543221110000 000000000          


Q ss_pred             -------cccccCcccc---chh-hHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          702 -------AWELIDPTLQ---NEA-SYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       702 -------~~~~id~~l~---~~~-~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                             ..+..+....   ... .......+.+++.+||+.+|++||++.+|+++.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~  288 (308)
T cd06615         232 DSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHP  288 (308)
T ss_pred             CccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence                   0000000000   000 011345688999999999999999999999864

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.9e-35  Score=310.50  Aligned_cols=255  Identities=33%  Similarity=0.470  Sum_probs=205.3

Q ss_pred             ccCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecC
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYM  553 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  553 (795)
                      .++|++.++||+|+||.||+|...+++.+|||.+.... ...+++.+|+.++++++||||+++++++......++||||+
T Consensus         5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   83 (261)
T cd05034           5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYM   83 (261)
T ss_pred             hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEecc
Confidence            46799999999999999999998778889999987533 44578999999999999999999999999989999999999


Q ss_pred             CCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccc
Q 003786          554 PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ  633 (795)
Q Consensus       554 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~  633 (795)
                      ++++|.+++.... ...+++..+..++.||+.||.|||+.+   ++|+||||+||+++.++.+||+|||++.........
T Consensus        84 ~~~~L~~~i~~~~-~~~~~~~~~~~~~~~i~~al~~lh~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~  159 (261)
T cd05034          84 SKGSLLDFLKSGE-GKKLRLPQLVDMAAQIAEGMAYLESRN---YIHRDLAARNILVGENLVCKIADFGLARLIEDDEYT  159 (261)
T ss_pred             CCCCHHHHHhccc-cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcchheEEEcCCCCEEECccccceeccchhhh
Confidence            9999999985432 245788999999999999999999988   999999999999999999999999999866432211


Q ss_pred             ccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCccccc
Q 003786          634 SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQN  712 (795)
Q Consensus       634 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~  712 (795)
                       ......++..|+|||.+.+..++.++|+|||||++|+|++ |+.|+......  ........   ...          .
T Consensus       160 -~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--~~~~~~~~---~~~----------~  223 (261)
T cd05034         160 -AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR--EVLEQVER---GYR----------M  223 (261)
T ss_pred             -hhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHc---CCC----------C
Confidence             1112234568999999998899999999999999999998 88887543221  11111100   000          0


Q ss_pred             hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          713 EASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       713 ~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      ..+...+..+.+++.+||+.+|++||+++++++.|+.
T Consensus       224 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         224 PRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence            1111124567899999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=100.00  E-value=2.1e-35  Score=345.70  Aligned_cols=259  Identities=24%  Similarity=0.314  Sum_probs=200.7

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccCc---cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG---QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      ++|++.++||+|+||.||+|+.. +++.||||++.....   ...+++.+|++++++++||||+++++++.+.+..++||
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM   81 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM   81 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence            57999999999999999999865 589999999975422   23457889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCC--------cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccc
Q 003786          551 EYMPNKSLDFFLFDSTK--------ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFG  622 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFG  622 (795)
                      ||+++++|.+++.....        ...+++..+..++.||++||+|||+.+   |+||||||+||+++.++.+||+|||
T Consensus        82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G---IIHRDLKPeNILLd~dg~vKLiDFG  158 (932)
T PRK13184         82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG---VLHRDLKPDNILLGLFGEVVILDWG  158 (932)
T ss_pred             EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchheEEEcCCCCEEEEecC
Confidence            99999999998853211        123455677899999999999999988   9999999999999999999999999


Q ss_pred             cccccCCCcc----------------cccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcc
Q 003786          623 MARIFGGDEL----------------QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNS  686 (795)
Q Consensus       623 la~~~~~~~~----------------~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~  686 (795)
                      +++.......                ........||+.|||||.+.+..++.++|||||||++|||++|+.||.......
T Consensus       159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k  238 (932)
T PRK13184        159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK  238 (932)
T ss_pred             cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence            9986521110                011123569999999999999999999999999999999999999986533221


Q ss_pred             hhHhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCC-CHHHHHHHHcc
Q 003786          687 LTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRP-TMFEVVSMLTN  749 (795)
Q Consensus       687 ~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RP-t~~evl~~L~~  749 (795)
                      ....    ..        ..++.- .......+..+.+++.+||+.||++|| +++++++.|+.
T Consensus       239 i~~~----~~--------i~~P~~-~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~  289 (932)
T PRK13184        239 ISYR----DV--------ILSPIE-VAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEP  289 (932)
T ss_pred             hhhh----hh--------ccChhh-ccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            1100    00        000000 000112345677899999999999996 56667666654

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=1.4e-35  Score=319.11  Aligned_cols=255  Identities=28%  Similarity=0.412  Sum_probs=199.0

Q ss_pred             ccCCccccccCcCCcccEEEeEec-Ccc--eEEEEEecccC-ccchHHHHHHHHHHHhc-CCcccceeeeeeeecceeeE
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQ--EVAVKRLSSQS-GQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEEKIL  548 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l  548 (795)
                      .++|++.+.||+|+||.||+|++. ++.  .+|+|.+.... ......+.+|++++.++ +||||+++++++.+.+..++
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l   85 (303)
T cd05088           6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL   85 (303)
T ss_pred             hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence            357899999999999999999864 344  45777765432 23446788999999999 89999999999999999999


Q ss_pred             EeecCCCCChhhhhhccC-------------CcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCC
Q 003786          549 IYEYMPNKSLDFFLFDST-------------KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMN  615 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~  615 (795)
                      ||||+++++|.+++....             ....+++..+..++.||++||+|||+.+   |+||||||+|||++.++.
T Consensus        86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dlkp~Nili~~~~~  162 (303)
T cd05088          86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYV  162 (303)
T ss_pred             EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEecCCCc
Confidence            999999999999986432             1235788899999999999999999988   999999999999999999


Q ss_pred             eeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHh
Q 003786          616 PKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAW  694 (795)
Q Consensus       616 vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~  694 (795)
                      +||+|||++......   .......++..|+|||.+.+..++.++|||||||++|||++ |..||........  .... 
T Consensus       163 ~kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~--~~~~-  236 (303)
T cd05088         163 AKIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL--YEKL-  236 (303)
T ss_pred             EEeCccccCcccchh---hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHH--HHHH-
Confidence            999999998643211   11111234668999999988889999999999999999998 9988864332211  1110 


Q ss_pred             hhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          695 DLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       695 ~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                         ......         ..+......+.+++.+||+.+|++||++.+++++|..
T Consensus       237 ---~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~  279 (303)
T cd05088         237 ---PQGYRL---------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR  279 (303)
T ss_pred             ---hcCCcC---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence               111000         0111233467899999999999999999999998866

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=1.2e-35  Score=322.80  Aligned_cols=238  Identities=24%  Similarity=0.278  Sum_probs=186.8

Q ss_pred             cccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHH-HHHHhcCCcccceeeeeeeecceeeEEeecCCC
Q 003786          481 NKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEI-KLIAKLQHRNLVRLLGCCIELEEKILIYEYMPN  555 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~-~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~  555 (795)
                      +.||+|+||.||+|+.. +++.||+|++.+..   ......+..|. .+++.++||||+++++++.+.+..++||||+++
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            46999999999999865 47889999986532   12223444444 456788999999999999999999999999999


Q ss_pred             CChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccccc
Q 003786          556 KSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK  635 (795)
Q Consensus       556 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~  635 (795)
                      ++|..++..   ...+.+..+..++.||++||.|||+.+   |+||||||+|||++.++.+||+|||+++......  ..
T Consensus        81 ~~L~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~g---iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~--~~  152 (325)
T cd05602          81 GELFYHLQR---ERCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN--GT  152 (325)
T ss_pred             CcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEEccCCCCcccccCC--CC
Confidence            999988843   345778888899999999999999988   9999999999999999999999999987532211  12


Q ss_pred             ccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhh
Q 003786          636 TKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEAS  715 (795)
Q Consensus       636 ~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~  715 (795)
                      .....||+.|+|||++.+..++.++|||||||++|||++|..||........  ....   .. ...          ...
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~i---~~-~~~----------~~~  216 (325)
T cd05602         153 TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM--YDNI---LN-KPL----------QLK  216 (325)
T ss_pred             cccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHH--HHHH---Hh-CCc----------CCC
Confidence            3346799999999999999999999999999999999999999865432211  1110   00 000          011


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCHHH
Q 003786          716 YLILNRYINVGLLCVQEDAADRPTMFE  742 (795)
Q Consensus       716 ~~~~~~l~~li~~cL~~dP~~RPt~~e  742 (795)
                      ......+.+++.+||+.+|.+||++.+
T Consensus       217 ~~~~~~~~~li~~~l~~~p~~R~~~~~  243 (325)
T cd05602         217 PNITNSARHLLEGLLQKDRTKRLGAKD  243 (325)
T ss_pred             CCCCHHHHHHHHHHcccCHHHCCCCCC
Confidence            123456778999999999999998874

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=9.9e-36  Score=327.65  Aligned_cols=262  Identities=23%  Similarity=0.232  Sum_probs=196.7

Q ss_pred             HHccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeec-----
Q 003786          472 AATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL-----  543 (795)
Q Consensus       472 ~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----  543 (795)
                      ...++|++.+.||+|+||.||+++.. .++.||||++....  ......+.+|+.+++.++||||+++++++...     
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~   93 (355)
T cd07874          14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE   93 (355)
T ss_pred             hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence            45678999999999999999999864 58899999986532  22345678899999999999999999988643     


Q ss_pred             -ceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccc
Q 003786          544 -EEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFG  622 (795)
Q Consensus       544 -~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFG  622 (795)
                       ...++||||++++ |...+.     ..+++..+..++.||++||.|||+.+   |+||||||+|||++.++.+||+|||
T Consensus        94 ~~~~~lv~e~~~~~-l~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDikp~Nill~~~~~~kl~Dfg  164 (355)
T cd07874          94 FQDVYLVMELMDAN-LCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG  164 (355)
T ss_pred             cceeEEEhhhhccc-HHHHHh-----hcCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEECCCCCEEEeeCc
Confidence             3468999999764 544442     23778889999999999999999988   9999999999999999999999999


Q ss_pred             cccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhh-------
Q 003786          623 MARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWD-------  695 (795)
Q Consensus       623 la~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~-------  695 (795)
                      +++......   ......||+.|+|||++.+..++.++|||||||++|+|++|+.||........ .......       
T Consensus       165 ~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~  240 (355)
T cd07874         165 LARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPE  240 (355)
T ss_pred             ccccCCCcc---ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCCHH
Confidence            998653322   22335789999999999998999999999999999999999999875431111 0000000       


Q ss_pred             -----------hccC-cccccccCc-----cc---cchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          696 -----------LWKD-DRAWELIDP-----TL---QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       696 -----------~~~~-~~~~~~id~-----~l---~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                                 .... .....+..+     .+   ...........+.+++.+||+.||++|||+.|++++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h  311 (355)
T cd07874         241 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH  311 (355)
T ss_pred             HHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence                       0000 000000000     00   001112234567899999999999999999999996

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=2.5e-35  Score=310.83  Aligned_cols=254  Identities=23%  Similarity=0.373  Sum_probs=201.5

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      .++|++.+.||+|+||.||+|+.. +++.||+|.+..........+.+|+.+++.++||||+++++.+...+..++||||
T Consensus         8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~   87 (267)
T cd06645           8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEF   87 (267)
T ss_pred             HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Confidence            357899999999999999999864 5889999998765545556788999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      +++++|.+++..   .+.+++..+..++.|++.||.|||+.+   |+|+||||+||+++.++.+||+|||++....... 
T Consensus        88 ~~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~-  160 (267)
T cd06645          88 CGGGSLQDIYHV---TGPLSESQIAYVSRETLQGLYYLHSKG---KMHRDIKGANILLTDNGHVKLADFGVSAQITATI-  160 (267)
T ss_pred             cCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECcceeeeEccCcc-
Confidence            999999998843   345889999999999999999999998   9999999999999999999999999987654221 


Q ss_pred             cccccccccccccccccccc---cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcc
Q 003786          633 QSKTKRIVGTYGYMSPEYAQ---QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT  709 (795)
Q Consensus       633 ~~~~~~~~gt~~y~APE~~~---~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~  709 (795)
                       .......|++.|+|||++.   ...++.++|||||||++|+|++|..|+......... ....    .....    .+.
T Consensus       161 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~-~~~~----~~~~~----~~~  230 (267)
T cd06645         161 -AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL-FLMT----KSNFQ----PPK  230 (267)
T ss_pred             -cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhH-Hhhh----ccCCC----CCc
Confidence             2223457899999999874   456889999999999999999999987543221111 0000    00000    000


Q ss_pred             ccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          710 LQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       710 l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ...  .......+.+++.+||+.+|++||++++|+++
T Consensus       231 ~~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~  265 (267)
T cd06645         231 LKD--KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH  265 (267)
T ss_pred             ccc--cCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence            000  01123467789999999999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.9e-35  Score=309.77  Aligned_cols=250  Identities=29%  Similarity=0.416  Sum_probs=203.6

Q ss_pred             ccCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecC
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYM  553 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  553 (795)
                      .++|++.+.||+|+||.||+|.. .++.||+|.+..... ..+++.+|+.++++++|+||+++++++.+.+..++||||+
T Consensus         5 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   82 (256)
T cd05039           5 SKELKLGATIGKGEFGDVMLGDY-RGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM   82 (256)
T ss_pred             hhhccceeeeecCCCceEEEEEe-cCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence            46789999999999999999986 478999999976543 5678999999999999999999999999999999999999


Q ss_pred             CCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccc
Q 003786          554 PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ  633 (795)
Q Consensus       554 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~  633 (795)
                      ++++|.+++.... ...+++..+..++.|++.||.|||+.+   |+|+||||+||+++.++.+||+|||+++......  
T Consensus        83 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~--  156 (256)
T cd05039          83 AKGSLVDYLRSRG-RAVITLAQQLGFALDVCEGMEYLEEKN---FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ--  156 (256)
T ss_pred             CCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccchhcccceEEEeCCCCEEEccccccccccccc--
Confidence            9999999885432 235889999999999999999999988   9999999999999999999999999998653221  


Q ss_pred             ccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCccccc
Q 003786          634 SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQN  712 (795)
Q Consensus       634 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~  712 (795)
                         .....+..|+|||.+....++.++||||||++++||++ |..|+.......  +.....    ....         .
T Consensus       157 ---~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~~~----~~~~---------~  218 (256)
T cd05039         157 ---DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVPHVE----KGYR---------M  218 (256)
T ss_pred             ---ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH--HHHHHh----cCCC---------C
Confidence               12334668999999988889999999999999999997 888875432111  111111    1100         0


Q ss_pred             hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          713 EASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       713 ~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      ..+...+..+.+++.+||+.+|++||++.|++++|+.
T Consensus       219 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  255 (256)
T cd05039         219 EAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL  255 (256)
T ss_pred             CCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence            1112234677899999999999999999999999865

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=100.00  E-value=2.3e-35  Score=309.20  Aligned_cols=249  Identities=31%  Similarity=0.409  Sum_probs=198.7

Q ss_pred             cccCcCCcccEEEeEecC--c--ceEEEEEecccCc-cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCCC
Q 003786          481 NKLGEGGFGPVYKGRLLN--G--QEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPN  555 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~~--~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~  555 (795)
                      ++||+|++|.||+|.+.+  +  ..||||.+..... ...+.+.+|+.++++++||||+++++.+.. ...++||||+++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~   79 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL   79 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence            469999999999998643  2  3699999977655 456789999999999999999999999988 889999999999


Q ss_pred             CChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccc-c
Q 003786          556 KSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ-S  634 (795)
Q Consensus       556 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~-~  634 (795)
                      ++|..++..... ..+++..+..++.|+++||+|||+.+   ++|+||||+||+++.++.+||+|||++......... .
T Consensus        80 ~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~  155 (257)
T cd05040          80 GSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLESKR---FIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYV  155 (257)
T ss_pred             CcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHhCC---ccccccCcccEEEecCCEEEecccccccccccccccee
Confidence            999998865432 46889999999999999999999988   999999999999999999999999999876432211 1


Q ss_pred             cccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCccccch
Q 003786          635 KTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNE  713 (795)
Q Consensus       635 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~  713 (795)
                      ......++..|+|||.+.+..++.++|||||||++|||++ |..|+........  ......   .....         .
T Consensus       156 ~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~--~~~~~~---~~~~~---------~  221 (257)
T cd05040         156 MEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQI--LKKIDK---EGERL---------E  221 (257)
T ss_pred             cccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHH--HHHHHh---cCCcC---------C
Confidence            1123457789999999998899999999999999999998 9999864332211  111100   00000         0


Q ss_pred             hhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHc
Q 003786          714 ASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT  748 (795)
Q Consensus       714 ~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~  748 (795)
                      .+...+..+.+++.+||+.+|++||++.+|++.|.
T Consensus       222 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         222 RPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             CCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence            11123457888999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=100.00  E-value=1.7e-35  Score=312.22  Aligned_cols=255  Identities=29%  Similarity=0.488  Sum_probs=201.4

Q ss_pred             cCCccccccCcCCcccEEEeEecC-c---ceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLN-G---QEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~-~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      .+|+..+.||+|+||.||+|+... +   ..+|+|.+.... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (268)
T cd05063           5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII   84 (268)
T ss_pred             HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence            468888999999999999998653 3   369999886542 23356788999999999999999999999999999999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      |||+++++|..++...  ...+++..+..++.|++.||+|||+.+   ++||||||+||+++.++.+||+|||++.....
T Consensus        85 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~  159 (268)
T cd05063          85 TEYMENGALDKYLRDH--DGEFSSYQLVGMLRGIAAGMKYLSDMN---YVHRDLAARNILVNSNLECKVSDFGLSRVLED  159 (268)
T ss_pred             EEcCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEEcCCCcEEECCCccceeccc
Confidence            9999999999988542  245788999999999999999999988   99999999999999999999999999986543


Q ss_pred             Cccccc-ccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccC
Q 003786          630 DELQSK-TKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID  707 (795)
Q Consensus       630 ~~~~~~-~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id  707 (795)
                      ...... ......++.|+|||++....++.++|||||||++|||++ |+.|+.......  ....    .....      
T Consensus       160 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~--~~~~----i~~~~------  227 (268)
T cd05063         160 DPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHE--VMKA----INDGF------  227 (268)
T ss_pred             ccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHH--HHHH----HhcCC------
Confidence            221111 111223467999999988889999999999999999997 999986433211  1111    11110      


Q ss_pred             ccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          708 PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       708 ~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                         ........+..+.+++.+|++.+|++||++.+|+++|++
T Consensus       228 ---~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~  266 (268)
T cd05063         228 ---RLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDK  266 (268)
T ss_pred             ---CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence               001111234567899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=1.6e-35  Score=315.62  Aligned_cols=252  Identities=27%  Similarity=0.343  Sum_probs=199.6

Q ss_pred             CCccccccCcCCcccEEEeEec-CcceEEEEEecccCc---cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG---QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      .|+..+.||+|+||.||++... +++.||||.+.+...   .....+.+|+.++++++|++|+++++.+.+.+..++|||
T Consensus         1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e   80 (285)
T cd05630           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence            3677889999999999999864 588999999865422   223457789999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      |+++++|.+++.... ...+++..+..++.|++.||.|||+.+   |+||||||+||+++.++.++|+|||++.......
T Consensus        81 ~~~g~~L~~~l~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~  156 (285)
T cd05630          81 LMNGGDLKFHIYHMG-EAGFEEGRAVFYAAEICCGLEDLHQER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ  156 (285)
T ss_pred             ecCCCcHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeccceeecCCCc
Confidence            999999998885432 234888999999999999999999987   9999999999999999999999999987643222


Q ss_pred             ccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcccc
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQ  711 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~  711 (795)
                         ......|+..|+|||.+.+..++.++|||||||++|+|++|+.||......... . .........          .
T Consensus       157 ---~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~-~-~~~~~~~~~----------~  221 (285)
T cd05630         157 ---TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR-E-EVERLVKEV----------Q  221 (285)
T ss_pred             ---cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchH-H-HHHhhhhhh----------h
Confidence               112346899999999999889999999999999999999999999753321110 0 000000000          0


Q ss_pred             chhhHHHHHHHHHHHHhhccCCCCCCCC-----HHHHHHH
Q 003786          712 NEASYLILNRYINVGLLCVQEDAADRPT-----MFEVVSM  746 (795)
Q Consensus       712 ~~~~~~~~~~l~~li~~cL~~dP~~RPt-----~~evl~~  746 (795)
                      ...+......+.+++.+||+.+|++|||     +.|++++
T Consensus       222 ~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h  261 (285)
T cd05630         222 EEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH  261 (285)
T ss_pred             hhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence            0111223456788999999999999999     8899875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-36  Score=321.89  Aligned_cols=245  Identities=33%  Similarity=0.433  Sum_probs=200.5

Q ss_pred             CCccccccCcCCcccEEEeEec-CcceEEEEEecccCcc---chHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQ---GQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      .|+-.+.||.|+||.||-++.. +.+.||||++.-...+   ....+..|+..|++++|||+|.+.|+|..+...+||||
T Consensus        27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME  106 (948)
T KOG0577|consen   27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME  106 (948)
T ss_pred             HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence            4667789999999999999864 5788999999755444   34578899999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      ||-| |-.+++.-  ..+.+-+.++..|+.+.++||+|||+++   .||||||..||||++.|.|||+|||.|.+..   
T Consensus       107 YClG-SAsDlleV--hkKplqEvEIAAi~~gaL~gLaYLHS~~---~IHRDiKAGNILLse~g~VKLaDFGSAsi~~---  177 (948)
T KOG0577|consen  107 YCLG-SASDLLEV--HKKPLQEVEIAAITHGALQGLAYLHSHN---RIHRDIKAGNILLSEPGLVKLADFGSASIMA---  177 (948)
T ss_pred             HHhc-cHHHHHHH--HhccchHHHHHHHHHHHHHHHHHHHHhh---HHhhhccccceEecCCCeeeeccccchhhcC---
Confidence            9964 55566632  3456888999999999999999999998   9999999999999999999999999998754   


Q ss_pred             ccccccccccccccccccccc---cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCc
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQ---QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP  708 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~---~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~  708 (795)
                         ....++|||.|||||++.   .+.|+-|+||||||++..||.-.++|.-..+.-.-.+  +..   .      .-.|
T Consensus       178 ---PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALY--HIA---Q------NesP  243 (948)
T KOG0577|consen  178 ---PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY--HIA---Q------NESP  243 (948)
T ss_pred             ---chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHH--HHH---h------cCCC
Confidence               345689999999999874   4689999999999999999999998875443222111  110   0      0112


Q ss_pred             cccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          709 TLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       709 ~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .+.   ..+....+++++..||+.-|.+|||..+++++
T Consensus       244 tLq---s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H  278 (948)
T KOG0577|consen  244 TLQ---SNEWSDYFRNFVDSCLQKIPQERPTSEELLKH  278 (948)
T ss_pred             CCC---CchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence            222   34566788899999999999999999999886

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=2.3e-35  Score=311.22  Aligned_cols=255  Identities=28%  Similarity=0.444  Sum_probs=201.6

Q ss_pred             cCCccccccCcCCcccEEEeEecC----cceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLN----GQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      .+|++.+.||+|+||.||+|+...    +..+|+|.+.... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV   83 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence            578899999999999999998642    3369999886532 23346789999999999999999999999999999999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      |||+++++|.+++...  ...+++..+..++.|++.||+|||+.+   ++||||||+||+++.++.+||+|||++.....
T Consensus        84 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~  158 (267)
T cd05066          84 TEYMENGSLDAFLRKH--DGQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVLED  158 (267)
T ss_pred             EEcCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeehhhchhcEEECCCCeEEeCCCCccccccc
Confidence            9999999999998543  235788899999999999999999988   99999999999999999999999999987643


Q ss_pred             Ccccc-cccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccC
Q 003786          630 DELQS-KTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID  707 (795)
Q Consensus       630 ~~~~~-~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id  707 (795)
                      ..... ......++..|+|||.+.+..++.++|+|||||++||+++ |..|+........  ....    .....     
T Consensus       159 ~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~--~~~~----~~~~~-----  227 (267)
T cd05066         159 DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDV--IKAI----EEGYR-----  227 (267)
T ss_pred             ccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHH--HHHH----hCCCc-----
Confidence            22111 1112233568999999998899999999999999999886 9988864432211  1111    11100     


Q ss_pred             ccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          708 PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       708 ~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                          ...+...+..+.+++.+|++.+|++||++.++++.|..
T Consensus       228 ----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  265 (267)
T cd05066         228 ----LPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDK  265 (267)
T ss_pred             ----CCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHh
Confidence                01112234567899999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=100.00  E-value=3.6e-37  Score=303.61  Aligned_cols=248  Identities=24%  Similarity=0.388  Sum_probs=209.5

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecC
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYM  553 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  553 (795)
                      +-|.++.+||+|+||.||++.++ .|+.+|||.+...  .+.+++..|+.||++++.|++|++||.+.....+++|||||
T Consensus        33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYC  110 (502)
T KOG0574|consen   33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYC  110 (502)
T ss_pred             HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhc
Confidence            34788899999999999999764 5999999998654  46688999999999999999999999999999999999999


Q ss_pred             CCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccc
Q 003786          554 PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ  633 (795)
Q Consensus       554 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~  633 (795)
                      ..|+..++++  .+++.+.+.++..++...++||+|||...   -||||||..||||+.+|..||+|||.|-.+...  .
T Consensus       111 GAGSiSDI~R--~R~K~L~E~EIs~iL~~TLKGL~YLH~~~---KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDT--M  183 (502)
T KOG0574|consen  111 GAGSISDIMR--ARRKPLSEQEISAVLRDTLKGLQYLHDLK---KIHRDIKAGNILLNTDGIAKLADFGVAGQLTDT--M  183 (502)
T ss_pred             CCCcHHHHHH--HhcCCccHHHHHHHHHHHHhHHHHHHHHH---HHHhhcccccEEEcccchhhhhhccccchhhhh--H
Confidence            9999999985  35677999999999999999999999986   899999999999999999999999999866433  2


Q ss_pred             ccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCccccccc--Ccccc
Q 003786          634 SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELI--DPTLQ  711 (795)
Q Consensus       634 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i--d~~l~  711 (795)
                      ....+..|||-|||||++..-.|+.++||||||++..||..|++|+..-..-               +...++  .|.-.
T Consensus       184 AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPM---------------RAIFMIPT~PPPT  248 (502)
T KOG0574|consen  184 AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPM---------------RAIFMIPTKPPPT  248 (502)
T ss_pred             HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccc---------------ceeEeccCCCCCC
Confidence            3455688999999999999999999999999999999999999998532211               111111  11111


Q ss_pred             chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          712 NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       712 ~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      -..+......+-+++.+||-.+|++|-|+.++++|
T Consensus       249 F~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H  283 (502)
T KOG0574|consen  249 FKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH  283 (502)
T ss_pred             CCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence            12345566788899999999999999999999986

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=3.8e-35  Score=309.36  Aligned_cols=250  Identities=28%  Similarity=0.428  Sum_probs=200.1

Q ss_pred             CCccccccCcCCcccEEEeEec-CcceEEEEEecccCccc---------hHHHHHHHHHHHhcCCcccceeeeeeeecce
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQG---------QEEFKNEIKLIAKLQHRNLVRLLGCCIELEE  545 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  545 (795)
                      +|.+.+.||+|++|.||+|... +++.+|+|.+.......         .+.+.+|+.++++++||||+++++++.+.+.
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   80 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH   80 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence            4778899999999999999864 57899999886543221         2567899999999999999999999999999


Q ss_pred             eeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccc
Q 003786          546 KILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR  625 (795)
Q Consensus       546 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~  625 (795)
                      .++|+||+++++|..++..   ...+++..+..++.|++.||+|||+.+   ++||||+|+||+++.++.+||+|||+++
T Consensus        81 ~~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~~l~~~l~~lH~~~---ivH~di~p~nil~~~~~~~~l~dfg~~~  154 (267)
T cd06628          81 LNIFLEYVPGGSVAALLNN---YGAFEETLVRNFVRQILKGLNYLHNRG---IIHRDIKGANILVDNKGGIKISDFGISK  154 (267)
T ss_pred             cEEEEEecCCCCHHHHHHh---ccCccHHHHHHHHHHHHHHHHHHHhcC---cccccCCHHHEEEcCCCCEEecccCCCc
Confidence            9999999999999999843   345788899999999999999999988   9999999999999999999999999998


Q ss_pred             ccCCCccc----ccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcc
Q 003786          626 IFGGDELQ----SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDR  701 (795)
Q Consensus       626 ~~~~~~~~----~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~  701 (795)
                      ........    .......|+..|+|||.+.+..++.++|+|||||++|+|++|..||........  ..   ....   
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~~---~~~~---  226 (267)
T cd06628         155 KLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQA--IF---KIGE---  226 (267)
T ss_pred             ccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHH--HH---HHhc---
Confidence            76422111    111234688999999999988899999999999999999999999865322111  00   0000   


Q ss_pred             cccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          702 AWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       702 ~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                         ...    ...+......+.+++.+||+.+|.+||++.||+++
T Consensus       227 ---~~~----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  264 (267)
T cd06628         227 ---NAS----PEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKH  264 (267)
T ss_pred             ---cCC----CcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence               001    11222344677889999999999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=1.6e-35  Score=327.06  Aligned_cols=261  Identities=22%  Similarity=0.256  Sum_probs=196.7

Q ss_pred             HHccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeec-----
Q 003786          472 AATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL-----  543 (795)
Q Consensus       472 ~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----  543 (795)
                      ...++|++.+.||+|+||.||+++.. .++.||||++....  ......+.+|+.+++.++||||+++++++...     
T Consensus        21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~  100 (364)
T cd07875          21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE  100 (364)
T ss_pred             chhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence            34578999999999999999999864 58899999986532  23346778999999999999999999987543     


Q ss_pred             -ceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccc
Q 003786          544 -EEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFG  622 (795)
Q Consensus       544 -~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFG  622 (795)
                       ...++||||+++ +|...+.     ..+++..+..++.|+++||+|||+++   |+||||||+|||++.++.+||+|||
T Consensus       101 ~~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG  171 (364)
T cd07875         101 FQDVYIVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG  171 (364)
T ss_pred             cCeEEEEEeCCCC-CHHHHHH-----hcCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEECCCCcEEEEeCC
Confidence             357999999976 5555552     23678889999999999999999988   9999999999999999999999999


Q ss_pred             cccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhcc----
Q 003786          623 MARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWK----  698 (795)
Q Consensus       623 la~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~----  698 (795)
                      +++......   ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...+....  .........    
T Consensus       172 ~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~--~~~~~~~~~~~~~  246 (364)
T cd07875         172 LARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ--WNKVIEQLGTPCP  246 (364)
T ss_pred             CccccCCCC---cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHhcCCCCH
Confidence            998654322   22335789999999999999999999999999999999999999975442111  000000000    


Q ss_pred             ---------------C-cc----cccccCccc----cchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          699 ---------------D-DR----AWELIDPTL----QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       699 ---------------~-~~----~~~~id~~l----~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                                     . ..    ..+.+.+..    ...........+.+++.+||+.||++|||+.|++++
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h  318 (364)
T cd07875         247 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH  318 (364)
T ss_pred             HHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence                           0 00    000000000    001111223467899999999999999999999986

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=3.9e-35  Score=307.01  Aligned_cols=250  Identities=25%  Similarity=0.383  Sum_probs=204.8

Q ss_pred             cCCccccccCcCCcccEEEeEecC-cceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecC
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYM  553 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  553 (795)
                      ++|++.+.||+|+||.||+|+... ++.+++|.+.....  .+.+.+|++++++++||||+++++.+.+....++++||+
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~   80 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC   80 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence            678999999999999999998765 78999999865432  678999999999999999999999999999999999999


Q ss_pred             CCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccc
Q 003786          554 PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ  633 (795)
Q Consensus       554 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~  633 (795)
                      ++++|.+++...  ...+++..+..++.|++.||.|||+.+   ++|+||+|+||+++.++.+||+|||++........ 
T Consensus        81 ~~~~L~~~l~~~--~~~l~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~-  154 (256)
T cd06612          81 GAGSVSDIMKIT--NKTLTEEEIAAILYQTLKGLEYLHSNK---KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA-  154 (256)
T ss_pred             CCCcHHHHHHhC--ccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEECCCCcEEEcccccchhcccCcc-
Confidence            999999988432  345889999999999999999999988   99999999999999999999999999987643321 


Q ss_pred             ccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccch
Q 003786          634 SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNE  713 (795)
Q Consensus       634 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~  713 (795)
                       ......++..|+|||++.+..++.++|||||||++++|++|+.|+............      ....     .+.  ..
T Consensus       155 -~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~------~~~~-----~~~--~~  220 (256)
T cd06612         155 -KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMI------PNKP-----PPT--LS  220 (256)
T ss_pred             -ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhh------ccCC-----CCC--CC
Confidence             223355889999999999889999999999999999999999998754322211100      0000     000  11


Q ss_pred             hhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          714 ASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       714 ~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .+......+.+++.+||+.+|++||++.||+++
T Consensus       221 ~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~  253 (256)
T cd06612         221 DPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQH  253 (256)
T ss_pred             chhhcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence            122344578899999999999999999999874

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=3.6e-35  Score=309.24  Aligned_cols=252  Identities=25%  Similarity=0.395  Sum_probs=200.9

Q ss_pred             CCccccccCcCCcccEEEeEecCcceEEEEEecccCc------cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          476 NFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSG------QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      +|++.+.||+|+||.||+|...+++.+|||.+.....      .....+.+|++++++++|+||+++++++.+.+..++|
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   80 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF   80 (265)
T ss_pred             CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence            4788899999999999999887889999998864321      1235688999999999999999999999999999999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      +||+++++|.+++...   ..+++..+..++.|++.||+|||+.+   |+|+||+|+||++++++.+||+|||++.....
T Consensus        81 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~  154 (265)
T cd06631          81 MEFVPGGSISSILNRF---GPLPEPVFCKYTKQILDGVAYLHNNC---VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAW  154 (265)
T ss_pred             EecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHhEEECCCCeEEeccchhhHhhhh
Confidence            9999999999998432   34788899999999999999999987   99999999999999999999999999886532


Q ss_pred             Cc----ccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccc
Q 003786          630 DE----LQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWEL  705 (795)
Q Consensus       630 ~~----~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  705 (795)
                      ..    .........|+..|+|||.+.+..++.++|||||||++|+|++|..||............ . .  ....    
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~-~-~--~~~~----  226 (265)
T cd06631         155 VGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYI-G-A--HRGL----  226 (265)
T ss_pred             ccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHh-h-h--ccCC----
Confidence            11    111223356899999999999888999999999999999999999998643321111000 0 0  0000    


Q ss_pred             cCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          706 IDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       706 id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                       .    ...+......+.+++.+||+.+|++||++.|++++
T Consensus       227 -~----~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~  262 (265)
T cd06631         227 -M----PRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRH  262 (265)
T ss_pred             -C----CCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence             0    11122244567889999999999999999999863

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=4.6e-35  Score=322.28  Aligned_cols=193  Identities=22%  Similarity=0.304  Sum_probs=163.8

Q ss_pred             HHccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          472 AATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       472 ~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      ....+|++.+.||+|+||.||+|+.. +++.||+|+....      ....|+.++++++||||+++++++.+....++|+
T Consensus        63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  136 (357)
T PHA03209         63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVL  136 (357)
T ss_pred             hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEE
Confidence            34568999999999999999999865 4778999975432      2456999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      |++.+ +|..++..  ....+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+++.....
T Consensus       137 e~~~~-~l~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~  210 (357)
T PHA03209        137 PHYSS-DLYTYLTK--RSRPLPIDQALIIEKQILEGLRYLHAQR---IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA  210 (357)
T ss_pred             EccCC-cHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEecCccccccccC
Confidence            99964 66666643  2345889999999999999999999988   999999999999999999999999999753221


Q ss_pred             cccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCC
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNT  679 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~  679 (795)
                         .......||+.|+|||++.+..++.++|||||||++|||+++..++
T Consensus       211 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~  256 (357)
T PHA03209        211 ---PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI  256 (357)
T ss_pred             ---cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence               1223356899999999999999999999999999999999866554

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=100.00  E-value=3.6e-35  Score=320.38  Aligned_cols=259  Identities=27%  Similarity=0.384  Sum_probs=202.5

Q ss_pred             cCCccccccCcCCcccEEEeEecC--------cceEEEEEecccC-ccchHHHHHHHHHHHhc-CCcccceeeeeeeecc
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLN--------GQEVAVKRLSSQS-GQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELE  544 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~  544 (795)
                      .+|++.+.||+|+||.||+++...        ...||+|.+.... ....+++.+|+++++++ +||||+++++++.+..
T Consensus        12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~   91 (334)
T cd05100          12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG   91 (334)
T ss_pred             hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence            568999999999999999997421        2368999886432 23456789999999999 7999999999999999


Q ss_pred             eeeEEeecCCCCChhhhhhccC-------------CcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEEC
Q 003786          545 EKILIYEYMPNKSLDFFLFDST-------------KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLD  611 (795)
Q Consensus       545 ~~~lv~E~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~  611 (795)
                      ..++++||+++++|.+++....             ....+++..+..++.||+.||.|||+.+   |+||||||+|||++
T Consensus        92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nill~  168 (334)
T cd05100          92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK---CIHRDLAARNVLVT  168 (334)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEc
Confidence            9999999999999999985432             2234777888999999999999999988   99999999999999


Q ss_pred             CCCCeeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHh
Q 003786          612 KDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLL  690 (795)
Q Consensus       612 ~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~  690 (795)
                      .++.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |..|+........  .
T Consensus       169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~--~  246 (334)
T cd05100         169 EDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEEL--F  246 (334)
T ss_pred             CCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHH--H
Confidence            999999999999986543322222222334578999999999999999999999999999998 7787754332111  1


Q ss_pred             HhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcccc
Q 003786          691 GHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKT  751 (795)
Q Consensus       691 ~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~  751 (795)
                      ..    .......         ..+......+.+++.+|++.+|++||++.|+++.|....
T Consensus       247 ~~----~~~~~~~---------~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~  294 (334)
T cd05100         247 KL----LKEGHRM---------DKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVL  294 (334)
T ss_pred             HH----HHcCCCC---------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence            11    1111100         111123456789999999999999999999999997743

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=2.8e-35  Score=308.22  Aligned_cols=250  Identities=22%  Similarity=0.293  Sum_probs=201.9

Q ss_pred             CCccccccCcCCcccEEEeEec-CcceEEEEEeccc-CccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecC
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQ-SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYM  553 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  553 (795)
                      +|++.++||+|+||.||+++.. +++.+|+|.+... .....+.+.+|+.+++.++||||+++++.+......++||||+
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC   80 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence            5788999999999999999865 5889999998543 2334567889999999999999999999999999999999999


Q ss_pred             CCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccc
Q 003786          554 PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ  633 (795)
Q Consensus       554 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~  633 (795)
                      ++++|.+++... ....+++..+..++.||+.||.|||+.+   |+|+||||+||++++++.++|+|||++........ 
T Consensus        81 ~~~~l~~~~~~~-~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~-  155 (255)
T cd08219          81 DGGDLMQKIKLQ-RGKLFPEDTILQWFVQMCLGVQHIHEKR---VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA-  155 (255)
T ss_pred             CCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEECCCCcEEEcccCcceeeccccc-
Confidence            999998887432 2345788899999999999999999988   99999999999999999999999999986543221 


Q ss_pred             ccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccch
Q 003786          634 SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNE  713 (795)
Q Consensus       634 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~  713 (795)
                       ......|++.|+|||++.+..++.++|+||||+++|+|++|..||...+....  ..   .. ......         .
T Consensus       156 -~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~--~~---~~-~~~~~~---------~  219 (255)
T cd08219         156 -YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNL--IL---KV-CQGSYK---------P  219 (255)
T ss_pred             -ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHH--HH---HH-hcCCCC---------C
Confidence             12335688999999999988899999999999999999999999864332111  11   11 011110         1


Q ss_pred             hhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          714 ASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       714 ~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .+......+.+++.+||+.+|++||++.+|++.
T Consensus       220 ~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         220 LPSHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             CCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence            112234467789999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=4.1e-35  Score=308.58  Aligned_cols=240  Identities=21%  Similarity=0.350  Sum_probs=187.8

Q ss_pred             cccCcCCcccEEEeEecC-------------cceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceee
Q 003786          481 NKLGEGGFGPVYKGRLLN-------------GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKI  547 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  547 (795)
                      +.||+|+||.||+|+...             ...+++|.+..........+.+|+.+++.++||||+++++++......+
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~   80 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI   80 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence            469999999999997422             2358899886655455567889999999999999999999999999999


Q ss_pred             EEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCC-------eeeec
Q 003786          548 LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMN-------PKISD  620 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~-------vkL~D  620 (795)
                      +||||+++++|+.++...  ...+++..+..++.||++||+|||+.+   |+||||||+|||++.++.       +|++|
T Consensus        81 lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~~~~~~~~~l~d  155 (262)
T cd05077          81 MVEEFVEFGPLDLFMHRK--SDVLTTPWKFKVAKQLASALSYLEDKD---LVHGNVCTKNILLAREGIDGECGPFIKLSD  155 (262)
T ss_pred             EEEecccCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHhhhCC---eECCCCCcccEEEecCCccCCCCceeEeCC
Confidence            999999999999887432  345888999999999999999999988   999999999999987664       89999


Q ss_pred             cccccccCCCcccccccccccccccccccccc-cCCCCcccchhhHHHHHHHHH-hCCCCCCCCCCcchhHhHhHhhhcc
Q 003786          621 FGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ-QGLFSIKSDVFSFGVLLLETL-SSKRNTDFSNTNSLTLLGHAWDLWK  698 (795)
Q Consensus       621 FGla~~~~~~~~~~~~~~~~gt~~y~APE~~~-~~~~~~k~DvwSlGvil~ell-tG~~p~~~~~~~~~~~~~~~~~~~~  698 (795)
                      ||++......      ....++..|+|||.+. +..++.++|||||||++|||+ .|..|+.........      ....
T Consensus       156 ~g~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~------~~~~  223 (262)
T cd05077         156 PGIPITVLSR------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE------RFYE  223 (262)
T ss_pred             CCCCccccCc------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH------HHHh
Confidence            9998754321      2245788999999886 467899999999999999998 577766532211110      0000


Q ss_pred             CcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHc
Q 003786          699 DDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT  748 (795)
Q Consensus       699 ~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~  748 (795)
                      ..  .....         .....+.+++.+||+.+|++||++.+|++.++
T Consensus       224 ~~--~~~~~---------~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~  262 (262)
T cd05077         224 GQ--CMLVT---------PSCKELADLMTHCMNYDPNQRPFFRAIMRDIN  262 (262)
T ss_pred             cC--ccCCC---------CChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence            00  00000         11346778999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.3e-35  Score=306.50  Aligned_cols=255  Identities=25%  Similarity=0.389  Sum_probs=205.8

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      .++|++.+.||+|+||.||+|... +++.+++|++........+.+.+|++++++++||||+++++++.+....+++|||
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~   81 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY   81 (262)
T ss_pred             ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence            367899999999999999999864 5788999999766555678899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      +++++|.+++...  ...+++..+..++.|++.||.|||+.+   |+|+||||+||+++.++.+||+|||++....... 
T Consensus        82 ~~~~~l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-  155 (262)
T cd06613          82 CGGGSLQDIYQVT--RGPLSELQIAYVCRETLKGLAYLHETG---KIHRDIKGANILLTEDGDVKLADFGVSAQLTATI-  155 (262)
T ss_pred             CCCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHhCC---ceecCCChhhEEECCCCCEEECccccchhhhhhh-
Confidence            9999999988542  245889999999999999999999987   9999999999999999999999999988654321 


Q ss_pred             cccccccccccccccccccccC---CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcc
Q 003786          633 QSKTKRIVGTYGYMSPEYAQQG---LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT  709 (795)
Q Consensus       633 ~~~~~~~~gt~~y~APE~~~~~---~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~  709 (795)
                       .......++..|+|||.+...   .++.++|||||||++|||++|..|+............ .    . ..   ...+.
T Consensus       156 -~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~-~----~-~~---~~~~~  225 (262)
T cd06613         156 -AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLI-S----K-SN---FPPPK  225 (262)
T ss_pred             -hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-H----h-cc---CCCcc
Confidence             122335688899999998776   8899999999999999999999998654322111110 0    0 00   00001


Q ss_pred             ccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          710 LQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       710 l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      +  ......+..+.+++.+||+.+|.+||++.+|+.+
T Consensus       226 ~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  260 (262)
T cd06613         226 L--KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH  260 (262)
T ss_pred             c--cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            1  1122345678899999999999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=2.8e-35  Score=335.60  Aligned_cols=266  Identities=20%  Similarity=0.240  Sum_probs=193.9

Q ss_pred             HhHHHHccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCc------ccceeeeee
Q 003786          468 ASVSAATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHR------NLVRLLGCC  540 (795)
Q Consensus       468 ~~i~~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~------niv~l~~~~  540 (795)
                      ..+....++|++.++||+|+||.||+|+.. .++.||||++.... .....+..|++++++++|.      +++++++++
T Consensus       122 ~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~  200 (467)
T PTZ00284        122 EDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF  200 (467)
T ss_pred             CccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence            344455688999999999999999999864 57889999996432 2344567788888887654      588898888


Q ss_pred             eec-ceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhc-CCCcEEeccCCCCcEEECCCC----
Q 003786          541 IEL-EEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY-SRLRVIHRDLKASNILLDKDM----  614 (795)
Q Consensus       541 ~~~-~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~~~iiHrDikp~NIll~~~~----  614 (795)
                      ... .+.++|||++ +++|.+++..   ...+++..+..++.||+.||.|||++ +   ||||||||+|||++.++    
T Consensus       201 ~~~~~~~~iv~~~~-g~~l~~~l~~---~~~l~~~~~~~i~~qi~~aL~yLH~~~g---IiHrDlKP~NILl~~~~~~~~  273 (467)
T PTZ00284        201 QNETGHMCIVMPKY-GPCLLDWIMK---HGPFSHRHLAQIIFQTGVALDYFHTELH---LMHTDLKPENILMETSDTVVD  273 (467)
T ss_pred             EcCCceEEEEEecc-CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEecCCcccc
Confidence            765 4678899987 6677777743   34588999999999999999999974 6   99999999999998765    


Q ss_pred             ------------CeeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCC
Q 003786          615 ------------NPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFS  682 (795)
Q Consensus       615 ------------~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~  682 (795)
                                  .+||+|||++....     .......||+.|+|||++.+..|+.++|||||||++|||++|+.||+..
T Consensus       274 ~~~~~~~~~~~~~vkl~DfG~~~~~~-----~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~  348 (467)
T PTZ00284        274 PVTNRALPPDPCRVRICDLGGCCDER-----HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTH  348 (467)
T ss_pred             cccccccCCCCceEEECCCCccccCc-----cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence                        49999999876432     1223467999999999999999999999999999999999999999765


Q ss_pred             CCcch-hHhHhHhhh----cc----Cccccccc------Cccccc-----------hhhHHHHHHHHHHHHhhccCCCCC
Q 003786          683 NTNSL-TLLGHAWDL----WK----DDRAWELI------DPTLQN-----------EASYLILNRYINVGLLCVQEDAAD  736 (795)
Q Consensus       683 ~~~~~-~~~~~~~~~----~~----~~~~~~~i------d~~l~~-----------~~~~~~~~~l~~li~~cL~~dP~~  736 (795)
                      ..... ..+......    +.    .....++.      .+....           .........+++||.+||+.||++
T Consensus       349 ~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~  428 (467)
T PTZ00284        349 DNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQK  428 (467)
T ss_pred             ChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhh
Confidence            43211 111110000    00    00000000      000000           000112345779999999999999


Q ss_pred             CCCHHHHHHH
Q 003786          737 RPTMFEVVSM  746 (795)
Q Consensus       737 RPt~~evl~~  746 (795)
                      |||++|+++|
T Consensus       429 R~ta~e~L~H  438 (467)
T PTZ00284        429 RLNARQMTTH  438 (467)
T ss_pred             CCCHHHHhcC
Confidence            9999999985

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4e-35  Score=319.52  Aligned_cols=256  Identities=21%  Similarity=0.274  Sum_probs=196.3

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      ++|++.+.||+|+||.||+++.. +++.||||++.+..   ....+.+.+|+.++..++|+||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM   80 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence            47899999999999999999865 58899999986521   223456889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      ||+++++|..++...  ...+++..+..++.||+.||+|||+++   |+||||||+|||++.++.+||+|||++......
T Consensus        81 e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~  155 (331)
T cd05597          81 DYYVGGDLLTLLSKF--EDRLPEDMARFYLAEMVLAIDSVHQLG---YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLAD  155 (331)
T ss_pred             ecCCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEECCCCHHHEEECCCCCEEEEECCceeecCCC
Confidence            999999999988432  345888999999999999999999998   999999999999999999999999998765432


Q ss_pred             ccccccccccccccccccccccc-----CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccc
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQQ-----GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWEL  705 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~~-----~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  705 (795)
                      .. .......||+.|||||++..     ..++.++|||||||++|||++|+.||........  ..   ..........+
T Consensus       156 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~--~~---~i~~~~~~~~~  229 (331)
T cd05597         156 GT-VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET--YG---KIMNHKEHFQF  229 (331)
T ss_pred             CC-ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHH--HH---HHHcCCCcccC
Confidence            21 11223468999999999863     4578899999999999999999999864332111  11   11111111110


Q ss_pred             cCccccchhhHHHHHHHHHHHHhhccCCC--CCCCCHHHHHHHH
Q 003786          706 IDPTLQNEASYLILNRYINVGLLCVQEDA--ADRPTMFEVVSML  747 (795)
Q Consensus       706 id~~l~~~~~~~~~~~l~~li~~cL~~dP--~~RPt~~evl~~L  747 (795)
                       .+     .....+..+.+++.+||...+  ..||++.+++++-
T Consensus       230 -~~-----~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp  267 (331)
T cd05597         230 -PP-----DVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHP  267 (331)
T ss_pred             -CC-----ccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCC
Confidence             00     011134456778888775533  3488999999973

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=1.7e-35  Score=312.97  Aligned_cols=254  Identities=27%  Similarity=0.413  Sum_probs=199.4

Q ss_pred             HHccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhc-CCcccceeeeeeeec------
Q 003786          472 AATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIEL------  543 (795)
Q Consensus       472 ~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~------  543 (795)
                      .+.+.|++.+.||+|+||.||+|+.. +++.+|+|++... ......+.+|+.+++++ +||||+++++++...      
T Consensus         3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (272)
T cd06637           3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD   81 (272)
T ss_pred             ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcC-CccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence            35677999999999999999999865 5888999998644 34456789999999998 699999999998753      


Q ss_pred             ceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccc
Q 003786          544 EEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGM  623 (795)
Q Consensus       544 ~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGl  623 (795)
                      ...++||||+++++|.+++... ....+++..+..++.|++.||+|||+.+   |+|+||||+||++++++.+||+|||+
T Consensus        82 ~~~~iv~e~~~~~~L~~~l~~~-~~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivh~dl~~~nili~~~~~~~l~Dfg~  157 (272)
T cd06637          82 DQLWLVMEFCGAGSVTDLIKNT-KGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGV  157 (272)
T ss_pred             cEEEEEEEcCCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHEEECCCCCEEEccCCC
Confidence            4578999999999999988542 2345888999999999999999999987   99999999999999999999999999


Q ss_pred             ccccCCCcccccccccccccccccccccc-----cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhcc
Q 003786          624 ARIFGGDELQSKTKRIVGTYGYMSPEYAQ-----QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWK  698 (795)
Q Consensus       624 a~~~~~~~~~~~~~~~~gt~~y~APE~~~-----~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~  698 (795)
                      +.......  .......|++.|+|||++.     +..++.++|||||||++|||++|..|+..........     ....
T Consensus       158 ~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~-----~~~~  230 (272)
T cd06637         158 SAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF-----LIPR  230 (272)
T ss_pred             ceeccccc--ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHH-----HHhc
Confidence            98653221  2233467899999999885     3468899999999999999999999985432111110     0000


Q ss_pred             CcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          699 DDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       699 ~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      . .....        .....+..+.+++.+||+.+|.+|||+.|++++
T Consensus       231 ~-~~~~~--------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  269 (272)
T cd06637         231 N-PAPRL--------KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH  269 (272)
T ss_pred             C-CCCCC--------CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence            0 00000        111233467899999999999999999999874

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=100.00  E-value=4e-35  Score=308.16  Aligned_cols=254  Identities=28%  Similarity=0.420  Sum_probs=203.4

Q ss_pred             ccCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecC
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYM  553 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  553 (795)
                      .++|++.++||+|+||.||+++...+..+|+|.+... ....+.+.+|++++++++|+||+++++.+.+ ...+++|||+
T Consensus         5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~   82 (260)
T cd05073           5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFM   82 (260)
T ss_pred             ccceeEEeEecCccceEEEEEEecCCccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeC
Confidence            4679999999999999999998777788999988643 2345678899999999999999999999887 7789999999


Q ss_pred             CCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccc
Q 003786          554 PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ  633 (795)
Q Consensus       554 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~  633 (795)
                      ++++|.+++... ....+++..+..++.|++.||.|||+.+   ++|+||||+||+++.++.+||+|||++.........
T Consensus        83 ~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~  158 (260)
T cd05073          83 AKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT  158 (260)
T ss_pred             CCCcHHHHHHhC-CccccCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCCcceeeccCCCcc
Confidence            999999998543 2345778889999999999999999987   999999999999999999999999999865432211


Q ss_pred             ccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCccccc
Q 003786          634 SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQN  712 (795)
Q Consensus       634 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~  712 (795)
                       ......++..|+|||++....++.++|+|||||++|+|++ |+.|+...+....  ...    .......         
T Consensus       159 -~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~--~~~----~~~~~~~---------  222 (260)
T cd05073         159 -AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV--IRA----LERGYRM---------  222 (260)
T ss_pred             -cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHH--HHH----HhCCCCC---------
Confidence             1222345678999999998889999999999999999998 8888865432211  111    0111100         


Q ss_pred             hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          713 EASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       713 ~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      ......+..+.+++.+|++.+|++||++.++++.|+.
T Consensus       223 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         223 PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             CCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            1112234568899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=2.4e-35  Score=322.98  Aligned_cols=262  Identities=23%  Similarity=0.286  Sum_probs=196.2

Q ss_pred             HHHHccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeec---
Q 003786          470 VSAATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL---  543 (795)
Q Consensus       470 i~~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~---  543 (795)
                      +....++|++.+.||+|+||.||+|+.. +++.||||++....  ....+.+.+|+++|++++||||+++++++...   
T Consensus        10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   89 (343)
T cd07878          10 VWEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSI   89 (343)
T ss_pred             HhhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccc
Confidence            3445678999999999999999999864 58899999986532  22345677899999999999999999987643   


Q ss_pred             ---ceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeec
Q 003786          544 ---EEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISD  620 (795)
Q Consensus       544 ---~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~D  620 (795)
                         ...++++|++ +++|..++.    ...+++..+..++.||++||.|||+.+   |+||||||+|||++.++.+||+|
T Consensus        90 ~~~~~~~~~~~~~-~~~l~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrdikp~Nil~~~~~~~kl~D  161 (343)
T cd07878          90 ENFNEVYLVTNLM-GADLNNIVK----CQKLSDEHVQFLIYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILD  161 (343)
T ss_pred             cccCcEEEEeecC-CCCHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCChhhEEECCCCCEEEcC
Confidence               3468899987 778877763    234889999999999999999999998   99999999999999999999999


Q ss_pred             cccccccCCCccccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccC
Q 003786          621 FGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKD  699 (795)
Q Consensus       621 FGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~  699 (795)
                      ||+++.....     .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||........  +.........
T Consensus       162 fg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~  234 (343)
T cd07878         162 FGLARQADDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQ--LKRIMEVVGT  234 (343)
T ss_pred             CccceecCCC-----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHH--HHHHHHHhCC
Confidence            9999865422     233578999999999876 5789999999999999999999999865432111  0000000000


Q ss_pred             c--ccc---------cccC--ccccch----hhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          700 D--RAW---------ELID--PTLQNE----ASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       700 ~--~~~---------~~id--~~l~~~----~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .  ...         ..+.  +.....    ........+.+++.+||+.||++|||+.|++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h  298 (343)
T cd07878         235 PSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH  298 (343)
T ss_pred             CCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            0  000         0000  000000    000112346789999999999999999999986

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=3.1e-35  Score=315.24  Aligned_cols=250  Identities=25%  Similarity=0.378  Sum_probs=204.6

Q ss_pred             cCCccccccCcCCcccEEEeEe-cCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecC
Q 003786          475 ANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYM  553 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  553 (795)
                      .+|++.+.||.|++|.||+|.. .+++.||+|.+........+.+.+|+.+++.++||||+++++++...+..++|+||+
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   98 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL   98 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence            4699999999999999999975 468999999987655555678899999999999999999999999999999999999


Q ss_pred             CCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccc
Q 003786          554 PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ  633 (795)
Q Consensus       554 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~  633 (795)
                      ++++|..++..    ..+++..+..++.|++.||.|||+.+   ++|+||||+||+++.++.+||+|||++........ 
T Consensus        99 ~~~~L~~~~~~----~~l~~~~~~~i~~~l~~al~~LH~~~---i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~-  170 (296)
T cd06655          99 AGGSLTDVVTE----TCMDEAQIAAVCRECLQALEFLHANQ---VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS-  170 (296)
T ss_pred             CCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccchhcccccc-
Confidence            99999998842    34789999999999999999999998   99999999999999999999999999886543321 


Q ss_pred             ccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccch
Q 003786          634 SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNE  713 (795)
Q Consensus       634 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~  713 (795)
                       ......+++.|+|||.+.+..++.++|||||||++|+|++|+.||...+.......  .   .. .....+       .
T Consensus       171 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~--~---~~-~~~~~~-------~  236 (296)
T cd06655         171 -KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL--I---AT-NGTPEL-------Q  236 (296)
T ss_pred             -cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH--H---Hh-cCCccc-------C
Confidence             12335688999999999988899999999999999999999999865442211110  0   00 000000       0


Q ss_pred             hhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          714 ASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       714 ~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .+......+.++|.+||+.+|++||++.+|+++
T Consensus       237 ~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~  269 (296)
T cd06655         237 NPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQH  269 (296)
T ss_pred             CcccCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence            112234467789999999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=3.5e-35  Score=308.14  Aligned_cols=247  Identities=25%  Similarity=0.402  Sum_probs=193.1

Q ss_pred             ccCcCCcccEEEeEec---CcceEEEEEecccCc-cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCCCCC
Q 003786          482 KLGEGGFGPVYKGRLL---NGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKS  557 (795)
Q Consensus       482 ~LG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gs  557 (795)
                      .||+|+||.||+|...   .+..||+|++..... ...+.+.+|+.++++++||||+++++++. ....++||||+++++
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~   80 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP   80 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence            4899999999999753   355799999865532 23467899999999999999999999875 457899999999999


Q ss_pred             hhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcccc-cc
Q 003786          558 LDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQS-KT  636 (795)
Q Consensus       558 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~-~~  636 (795)
                      |.+++...  ...+++..+..++.||+.||.|||+++   ++||||||+||+++.++.+||+|||++.......... ..
T Consensus        81 L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~  155 (257)
T cd05115          81 LNKFLSGK--KDEITVSNVVELMHQVSMGMKYLEGKN---FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKAR  155 (257)
T ss_pred             HHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhcC---eeecccchheEEEcCCCcEEeccCCccccccCCccceecc
Confidence            99988532  345889999999999999999999988   9999999999999999999999999998654332111 11


Q ss_pred             cccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhh
Q 003786          637 KRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEAS  715 (795)
Q Consensus       637 ~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~  715 (795)
                      ....+++.|+|||.+....++.++|||||||++|||++ |..|+........  ..    ......         ....+
T Consensus       156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~--~~----~~~~~~---------~~~~~  220 (257)
T cd05115         156 SAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEV--MS----FIEQGK---------RLDCP  220 (257)
T ss_pred             CCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHH--HH----HHHCCC---------CCCCC
Confidence            11233578999999988889999999999999999996 9988864432211  11    011111         01112


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          716 YLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       716 ~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      ......+.+++..||+.+|++||++.+|.+.|..
T Consensus       221 ~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~  254 (257)
T cd05115         221 AECPPEMYALMKDCWIYKWEDRPNFAKVEERMRT  254 (257)
T ss_pred             CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhh
Confidence            2234677789999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.7e-36  Score=312.06  Aligned_cols=252  Identities=26%  Similarity=0.329  Sum_probs=207.7

Q ss_pred             HccCCccccccCcCCcccEEEeEec-CcceEEEEEeccc---CccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeE
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQ---SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKIL  548 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  548 (795)
                      .-+.|+.-++||+||||.||-++.. +|+.+|.|.+.+.   ..+++....+|-+||.+++.++||.+-..|...+.++|
T Consensus       183 t~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LCl  262 (591)
T KOG0986|consen  183 TKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCL  262 (591)
T ss_pred             cccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEE
Confidence            3466888899999999999999854 5999999988654   23455667899999999999999999999999999999


Q ss_pred             EeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccC
Q 003786          549 IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      |+..|.||+|..+|..... ..+++..+..++.+|+.||.+||+..   ||+|||||+|||||+.|++.|+|+|||..+.
T Consensus       263 VLtlMNGGDLkfHiyn~g~-~gF~e~ra~FYAAEi~cGLehlH~~~---iVYRDLKPeNILLDd~GhvRISDLGLAvei~  338 (591)
T KOG0986|consen  263 VLTLMNGGDLKFHIYNHGN-PGFDEQRARFYAAEIICGLEHLHRRR---IVYRDLKPENILLDDHGHVRISDLGLAVEIP  338 (591)
T ss_pred             EEEeecCCceeEEeeccCC-CCCchHHHHHHHHHHHhhHHHHHhcc---eeeccCChhheeeccCCCeEeeccceEEecC
Confidence            9999999999999976543 56899999999999999999999987   9999999999999999999999999999876


Q ss_pred             CCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCc
Q 003786          629 GDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP  708 (795)
Q Consensus       629 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~  708 (795)
                      ....   ....+||.+|||||++++..|+..+|+|||||+||||+.|+.||-...+..-               .+-+|.
T Consensus       339 ~g~~---~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk---------------~eEvdr  400 (591)
T KOG0986|consen  339 EGKP---IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVK---------------REEVDR  400 (591)
T ss_pred             CCCc---cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhh---------------HHHHHH
Confidence            5543   2334899999999999999999999999999999999999999853321111               011111


Q ss_pred             cc---cchhhHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHH
Q 003786          709 TL---QNEASYLILNRYINVGLLCVQEDAADRP-----TMFEVVSM  746 (795)
Q Consensus       709 ~l---~~~~~~~~~~~l~~li~~cL~~dP~~RP-----t~~evl~~  746 (795)
                      ++   ..+.+....++..++....|+.||++|.     .+.+|.+|
T Consensus       401 r~~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~H  446 (591)
T KOG0986|consen  401 RTLEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEH  446 (591)
T ss_pred             HHhcchhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhC
Confidence            11   1234455667777888889999999996     45577665

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=4.2e-35  Score=307.16  Aligned_cols=248  Identities=28%  Similarity=0.415  Sum_probs=198.1

Q ss_pred             cCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeee-ecceeeEEeecC
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCI-ELEEKILIYEYM  553 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lv~E~~  553 (795)
                      .+|++.+.||+|+||.||++.. .+..+|+|.+...  ...+.+.+|+.++++++|+|++++++++. +.+..++|+||+
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~   82 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM   82 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEE-cCCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence            5788999999999999999976 4788999988543  33567899999999999999999999764 456789999999


Q ss_pred             CCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccc
Q 003786          554 PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ  633 (795)
Q Consensus       554 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~  633 (795)
                      ++++|.+++.... ...+++..+..++.||+.||+|||+++   |+||||||+||++++++.+||+|||+++......  
T Consensus        83 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~--  156 (256)
T cd05082          83 AKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEANN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ--  156 (256)
T ss_pred             CCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---EeccccchheEEEcCCCcEEecCCccceeccccC--
Confidence            9999999885432 335788999999999999999999988   9999999999999999999999999987543221  


Q ss_pred             ccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCccccc
Q 003786          634 SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQN  712 (795)
Q Consensus       634 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~  712 (795)
                         ....++..|+|||++.+..++.++|||||||++|||++ |+.|+........  ....    .....         .
T Consensus       157 ---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~--~~~~----~~~~~---------~  218 (256)
T cd05082         157 ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV--VPRV----EKGYK---------M  218 (256)
T ss_pred             ---CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHH--HHHH----hcCCC---------C
Confidence               22344678999999998899999999999999999997 8888764322111  1110    01100         1


Q ss_pred             hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          713 EASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       713 ~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      ......+..+.+++.+|++.+|++|||+.++++.|+.
T Consensus       219 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  255 (256)
T cd05082         219 DAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH  255 (256)
T ss_pred             CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence            1112234567889999999999999999999999865

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=100.00  E-value=3.8e-35  Score=307.33  Aligned_cols=252  Identities=29%  Similarity=0.479  Sum_probs=201.9

Q ss_pred             cCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCC
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMP  554 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~  554 (795)
                      .+|++.+.||+|+||.||++...+++.+|+|++... ......+.+|++++++++||||+++++++......++||||++
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   82 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREG-AMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME   82 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCC-CCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence            468888999999999999998877889999988643 2345678999999999999999999999999999999999999


Q ss_pred             CCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcccc
Q 003786          555 NKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQS  634 (795)
Q Consensus       555 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~  634 (795)
                      +++|.+++...  ...+++..+..++.|++.+|.|||+.+   ++|+||||+||+++.++.+||+|||++......... 
T Consensus        83 ~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~-  156 (256)
T cd05112          83 HGCLSDYLRAQ--RGKFSQETLLGMCLDVCEGMAYLESSN---VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYT-  156 (256)
T ss_pred             CCcHHHHHHhC--ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccccceEEEcCCCeEEECCCcceeecccCccc-
Confidence            99999888532  234788899999999999999999988   999999999999999999999999998865432211 


Q ss_pred             cccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCccccch
Q 003786          635 KTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNE  713 (795)
Q Consensus       635 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~  713 (795)
                      ......++..|+|||.+.++.++.++||||||+++|||++ |..|+.......  ....   . ...  .....+..   
T Consensus       157 ~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~--~~~~---~-~~~--~~~~~~~~---  225 (256)
T cd05112         157 SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE--VVET---I-NAG--FRLYKPRL---  225 (256)
T ss_pred             ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHH--HHHH---H-hCC--CCCCCCCC---
Confidence            1122335678999999988889999999999999999998 888876433211  1111   0 000  01111111   


Q ss_pred             hhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHc
Q 003786          714 ASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT  748 (795)
Q Consensus       714 ~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~  748 (795)
                          .+..+.+++.+||+.+|++||++.|++++|.
T Consensus       226 ----~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~  256 (256)
T cd05112         226 ----ASQSVYELMQHCWKERPEDRPSFSLLLHQLA  256 (256)
T ss_pred             ----CCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence                2357889999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=4.8e-35  Score=311.39  Aligned_cols=251  Identities=25%  Similarity=0.361  Sum_probs=199.9

Q ss_pred             CccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCCC
Q 003786          477 FSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPN  555 (795)
Q Consensus       477 ~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~  555 (795)
                      |++.++||+|+||.||+|+.. ++..+++|.+........+.+.+|+++++.++||||+++++++...+..++|+||+++
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~   86 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG   86 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence            678899999999999999865 4778999998765555567788999999999999999999999999999999999999


Q ss_pred             CChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccccc
Q 003786          556 KSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK  635 (795)
Q Consensus       556 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~  635 (795)
                      ++|..++..  ....+++..+..++.||++||.|||+.+   |+||||||+||+++.++.+||+|||++.......  ..
T Consensus        87 ~~l~~~~~~--~~~~l~~~~~~~~~~qi~~~L~~LH~~~---i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~--~~  159 (282)
T cd06643          87 GAVDAVMLE--LERPLTEPQIRVVCKQTLEALNYLHENK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI--QR  159 (282)
T ss_pred             CcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEccCCCEEEccccccccccccc--cc
Confidence            999888743  2345889999999999999999999988   9999999999999999999999999987543221  12


Q ss_pred             ccccccccccccccccc-----cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccc
Q 003786          636 TKRIVGTYGYMSPEYAQ-----QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL  710 (795)
Q Consensus       636 ~~~~~gt~~y~APE~~~-----~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l  710 (795)
                      .....+++.|+|||++.     +..++.++|||||||++|||++|+.|+........  ....   .. .......    
T Consensus       160 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~--~~~~---~~-~~~~~~~----  229 (282)
T cd06643         160 RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRV--LLKI---AK-SEPPTLA----  229 (282)
T ss_pred             cccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHH--HHHH---hh-cCCCCCC----
Confidence            23456899999999873     35678899999999999999999999864332111  1100   00 0000000    


Q ss_pred             cchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       711 ~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                         .+......+.+++.+||+.+|++||++.+++++.
T Consensus       230 ---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~  263 (282)
T cd06643         230 ---QPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHP  263 (282)
T ss_pred             ---CccccCHHHHHHHHHHccCChhhCcCHHHHhcCC
Confidence               1112345678999999999999999999998753

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=3.8e-35  Score=314.74  Aligned_cols=251  Identities=25%  Similarity=0.380  Sum_probs=204.6

Q ss_pred             ccCCccccccCcCCcccEEEeEe-cCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          474 TANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      ..+|++.+.||+|+||.||+++. .+++.||+|.+........+.+.+|+.+++.++||||+++++++......++||||
T Consensus        18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   97 (297)
T cd06656          18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   97 (297)
T ss_pred             hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence            46899999999999999999986 46899999999765555567789999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      +++++|.+++..    ..+++..+..++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||++........
T Consensus        98 ~~~~~L~~~~~~----~~~~~~~~~~~~~~l~~~L~~LH~~~---i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~  170 (297)
T cd06656          98 LAGGSLTDVVTE----TCMDEGQIAAVCRECLQALDFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS  170 (297)
T ss_pred             cCCCCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEECcCccceEccCCcc
Confidence            999999998842    34788899999999999999999988   99999999999999999999999999876543321


Q ss_pred             cccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccc
Q 003786          633 QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQN  712 (795)
Q Consensus       633 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~  712 (795)
                        ......+++.|+|||.+.+..++.++|+|||||++|+|++|..||...+.......     ..... .     +.  .
T Consensus       171 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~-----~~~~~-~-----~~--~  235 (297)
T cd06656         171 --KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL-----IATNG-T-----PE--L  235 (297)
T ss_pred             --CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheee-----eccCC-C-----CC--C
Confidence              12235688999999999988899999999999999999999999864332111100     00000 0     00  0


Q ss_pred             hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          713 EASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       713 ~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ..+......+.+++.+||+.+|++||++.+++++
T Consensus       236 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  269 (297)
T cd06656         236 QNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQH  269 (297)
T ss_pred             CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            1122234567789999999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=100.00  E-value=5.7e-35  Score=308.51  Aligned_cols=254  Identities=27%  Similarity=0.396  Sum_probs=188.6

Q ss_pred             cccCcCCcccEEEeEecC---cceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCCCC
Q 003786          481 NKLGEGGFGPVYKGRLLN---GQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNK  556 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g  556 (795)
                      +.||+|+||.||+|+...   ...+|+|.+.... ......+.+|+++++.++||||+++++.+.+....++||||+++|
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG   80 (269)
T ss_pred             CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence            369999999999997543   3568888775432 233456889999999999999999999999999999999999999


Q ss_pred             ChhhhhhccCC--cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcccc
Q 003786          557 SLDFFLFDSTK--ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQS  634 (795)
Q Consensus       557 sL~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~  634 (795)
                      +|.+++.....  ....++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++..........
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~  157 (269)
T cd05042          81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD---FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYI  157 (269)
T ss_pred             cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC---EecccccHhheEecCCCcEEEeccccccccccchhee
Confidence            99999865432  233567778899999999999999988   9999999999999999999999999987543322211


Q ss_pred             ccccccccccccccccccc-------CCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCccccccc
Q 003786          635 KTKRIVGTYGYMSPEYAQQ-------GLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELI  706 (795)
Q Consensus       635 ~~~~~~gt~~y~APE~~~~-------~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i  706 (795)
                      ......+++.|+|||++..       ..++.++|||||||++|||++ |..|+.......  .....   ... ....+.
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~--~~~~~---~~~-~~~~~~  231 (269)
T cd05042         158 TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ--VLKQV---VRE-QDIKLP  231 (269)
T ss_pred             ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH--HHHHH---hhc-cCccCC
Confidence            2233446778999998743       457889999999999999999 677775432211  11110   111 111111


Q ss_pred             CccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHc
Q 003786          707 DPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT  748 (795)
Q Consensus       707 d~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~  748 (795)
                      .+.+    .......+.+++..|+ .+|++||++++|++.|.
T Consensus       232 ~~~~----~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~  268 (269)
T cd05042         232 KPQL----DLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT  268 (269)
T ss_pred             CCcc----cccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence            2221    1223345566778888 59999999999999874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=7.7e-35  Score=310.42  Aligned_cols=253  Identities=22%  Similarity=0.343  Sum_probs=201.2

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEeccc-CccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQ-SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      ++|++.+.||+|+||.||++... +++.||+|.+... .......+.+|+.++++++||||+++++.+......++||||
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY   80 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence            46889999999999999999875 6899999988653 223346788999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhc-CCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY-SRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      +++++|..++........+++..+..++.||++||.|||+. +   |+||||||+||+++.++.+||+|||++...... 
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-  156 (286)
T cd06622          81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN---IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS-  156 (286)
T ss_pred             cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCC---EeeCCCCHHHEEECCCCCEEEeecCCcccccCC-
Confidence            99999998886543344689999999999999999999974 5   999999999999999999999999998765322 


Q ss_pred             ccccccccccccccccccccccC------CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccc
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQG------LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWEL  705 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~~------~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  705 (795)
                         ......+++.|+|||.+.+.      .++.++|+|||||++|+|++|+.||........  ....... ....    
T Consensus       157 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~--~~~~~~~-~~~~----  226 (286)
T cd06622         157 ---LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANI--FAQLSAI-VDGD----  226 (286)
T ss_pred             ---ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhH--HHHHHHH-hhcC----
Confidence               12334688899999988543      358899999999999999999999864332111  1100000 0000    


Q ss_pred             cCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          706 IDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       706 id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                           ....+..+...+.+++.+||+.+|++||++.+++++
T Consensus       227 -----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~  262 (286)
T cd06622         227 -----PPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH  262 (286)
T ss_pred             -----CCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence                 011222355677889999999999999999999985

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=5.9e-35  Score=312.40  Aligned_cols=252  Identities=25%  Similarity=0.383  Sum_probs=201.4

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecC
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYM  553 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  553 (795)
                      +.|++.++||+|+||.||+|+.. +++.+++|.+........+.+.+|+.++++++||||+++++.+..+...++||||+
T Consensus        12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   91 (292)
T cd06644          12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC   91 (292)
T ss_pred             hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence            67999999999999999999875 48899999997766566678899999999999999999999999999999999999


Q ss_pred             CCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccc
Q 003786          554 PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ  633 (795)
Q Consensus       554 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~  633 (795)
                      ++++|..++...  ...+++..+..++.|++++|.|||+.+   |+||||||+||+++.++.+||+|||++.......  
T Consensus        92 ~~~~l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~--  164 (292)
T cd06644          92 PGGAVDAIMLEL--DRGLTEPQIQVICRQMLEALQYLHSMK---IIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL--  164 (292)
T ss_pred             CCCcHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhcCC---eeecCCCcceEEEcCCCCEEEccCccceeccccc--
Confidence            999998877432  235889999999999999999999987   9999999999999999999999999987543221  


Q ss_pred             ccccccccccccccccccc-----cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCc
Q 003786          634 SKTKRIVGTYGYMSPEYAQ-----QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP  708 (795)
Q Consensus       634 ~~~~~~~gt~~y~APE~~~-----~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~  708 (795)
                      .......+++.|+|||++.     ...++.++|||||||++|||++|+.|+........ ..    .. ........   
T Consensus       165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~-~~----~~-~~~~~~~~---  235 (292)
T cd06644         165 QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV-LL----KI-AKSEPPTL---  235 (292)
T ss_pred             cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHH-HH----HH-hcCCCccC---
Confidence            1223456889999999884     34578899999999999999999999854331111 11    00 00000000   


Q ss_pred             cccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          709 TLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       709 ~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                          ..+......+.+++.+||+.+|++||++.+++++
T Consensus       236 ----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  269 (292)
T cd06644         236 ----SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH  269 (292)
T ss_pred             ----CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence                0112234467889999999999999999999874

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=8e-35  Score=310.33  Aligned_cols=252  Identities=24%  Similarity=0.299  Sum_probs=198.8

Q ss_pred             CCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      .|+..+.||+|+||.||+++.. +++.+|+|.+....   ......+.+|+++|++++|+||+++++.+..++..++|||
T Consensus         1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e   80 (285)
T cd05632           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence            3677789999999999999864 58899999986542   2223457889999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      |+++++|..++.... ...+++..+..++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||++.......
T Consensus        81 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~---iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~  156 (285)
T cd05632          81 IMNGGDLKFHIYNMG-NPGFEEERALFYAAEILCGLEDLHREN---TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE  156 (285)
T ss_pred             eccCccHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEECCCCCEEEecCCcceecCCCC
Confidence            999999988875432 235899999999999999999999988   9999999999999999999999999987643221


Q ss_pred             ccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcccc
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQ  711 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~  711 (795)
                         ......|+..|+|||.+.+..++.++|+|||||++|||++|..||......... .... .......      .   
T Consensus       157 ---~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~-~~~~-~~~~~~~------~---  222 (285)
T cd05632         157 ---SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKR-EEVD-RRVLETE------E---  222 (285)
T ss_pred             ---cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHH-Hhhhccc------c---
Confidence               122356899999999998889999999999999999999999998754321111 0000 0000000      0   


Q ss_pred             chhhHHHHHHHHHHHHhhccCCCCCCCC-----HHHHHHH
Q 003786          712 NEASYLILNRYINVGLLCVQEDAADRPT-----MFEVVSM  746 (795)
Q Consensus       712 ~~~~~~~~~~l~~li~~cL~~dP~~RPt-----~~evl~~  746 (795)
                       .........+.+++..||+.+|++||+     +.+++++
T Consensus       223 -~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05632         223 -VYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH  261 (285)
T ss_pred             -ccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence             011123345678999999999999999     6777775

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=5.6e-35  Score=308.43  Aligned_cols=256  Identities=25%  Similarity=0.365  Sum_probs=199.9

Q ss_pred             HccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      +++.+.....||+|+||.||+|+.. +++.||+|.+........+.+.+|+.++++++|+||+++++++..++..++|+|
T Consensus         6 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   85 (268)
T cd06624           6 EYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFME   85 (268)
T ss_pred             ccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEe
Confidence            4455666678999999999999864 577899999876655566789999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECC-CCCeeeeccccccccCCC
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDK-DMNPKISDFGMARIFGGD  630 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~-~~~vkL~DFGla~~~~~~  630 (795)
                      |+++++|.+++......-..++..+..++.||+.||+|||+.+   |+||||||+||+++. ++.+||+|||++......
T Consensus        86 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~  162 (268)
T cd06624          86 QVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGI  162 (268)
T ss_pred             cCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCeEEEecchhheecccC
Confidence            9999999999864322212267788899999999999999987   999999999999976 679999999998765432


Q ss_pred             cccccccccccccccccccccccC--CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCc
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQQG--LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP  708 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~~~--~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~  708 (795)
                      ..  ......|++.|+|||++...  .++.++||||||+++|+|++|+.|+.............  ...           
T Consensus       163 ~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~--~~~-----------  227 (268)
T cd06624         163 NP--CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKV--GMF-----------  227 (268)
T ss_pred             CC--ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhh--hhh-----------
Confidence            21  12234588999999998654  47899999999999999999999985432211111000  000           


Q ss_pred             cccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          709 TLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       709 ~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ......+......+.+++.+||+.+|++||++.|++++
T Consensus       228 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  265 (268)
T cd06624         228 KIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD  265 (268)
T ss_pred             ccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence            00111222344567889999999999999999999874

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=4.7e-35  Score=306.98  Aligned_cols=248  Identities=31%  Similarity=0.427  Sum_probs=194.9

Q ss_pred             cccCcCCcccEEEeEecC----cceEEEEEecccCc-cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCCC
Q 003786          481 NKLGEGGFGPVYKGRLLN----GQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPN  555 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~  555 (795)
                      ++||+|+||.||+|+...    +..+|+|.+..... ...+++.+|+++++++.||||+++++++. .+..++||||+++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~   79 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL   79 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence            479999999999997532    26899999875543 24567899999999999999999999875 5568999999999


Q ss_pred             CChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcccc-
Q 003786          556 KSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQS-  634 (795)
Q Consensus       556 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~-  634 (795)
                      ++|.+++...   ..+++..+..++.|++.||+|||..+   ++|+||||+||+++.++.+||+|||+++......... 
T Consensus        80 ~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~  153 (257)
T cd05060          80 GPLLKYLKKR---REIPVSDLKELAHQVAMGMAYLESKH---FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYR  153 (257)
T ss_pred             CcHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHhhcC---eeccCcccceEEEcCCCcEEeccccccceeecCCcccc
Confidence            9999998543   35789999999999999999999987   9999999999999999999999999998664322111 


Q ss_pred             cccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCccccch
Q 003786          635 KTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNE  713 (795)
Q Consensus       635 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~  713 (795)
                      ......++..|+|||.+.+..++.++|||||||++|+|++ |..|+.......  ......    ....         ..
T Consensus       154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~--~~~~~~----~~~~---------~~  218 (257)
T cd05060         154 ATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAE--VIAMLE----SGER---------LP  218 (257)
T ss_pred             cccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHH--HHHHHH----cCCc---------CC
Confidence            1111223567999999988899999999999999999998 898886543221  111111    1100         01


Q ss_pred             hhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          714 ASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       714 ~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                      .+...+..+.+++.+||+.+|++||++.+|++.|+..
T Consensus       219 ~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~  255 (257)
T cd05060         219 RPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD  255 (257)
T ss_pred             CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence            1122345678999999999999999999999999763

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=5.5e-35  Score=317.95  Aligned_cols=264  Identities=19%  Similarity=0.219  Sum_probs=194.6

Q ss_pred             cccccCcC--CcccEEEeEe-cCcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecC
Q 003786          479 TENKLGEG--GFGPVYKGRL-LNGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYM  553 (795)
Q Consensus       479 ~~~~LG~G--~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  553 (795)
                      +.++||+|  +|++||+++. .+++.||||++....  ....+.+++|+++++.++||||+++++++..++..++||||+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   81 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM   81 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence            46789999  6789999976 468999999986542  233456888999999999999999999999999999999999


Q ss_pred             CCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc-
Q 003786          554 PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL-  632 (795)
Q Consensus       554 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~-  632 (795)
                      ++++|.+++.... ...+++..+..++.||+.||.|||+++   |+||||||+|||++.++.++++||+.+........ 
T Consensus        82 ~~~~l~~~~~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~  157 (327)
T cd08227          82 AYGSAKDLICTHF-MDGMSELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQR  157 (327)
T ss_pred             CCCcHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCChhhEEEecCCcEEEcccchhhcccccccc
Confidence            9999999885432 234788999999999999999999988   99999999999999999999999987553321110 


Q ss_pred             ----ccccccccccccccccccccc--CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhc---cC----
Q 003786          633 ----QSKTKRIVGTYGYMSPEYAQQ--GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLW---KD----  699 (795)
Q Consensus       633 ----~~~~~~~~gt~~y~APE~~~~--~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~---~~----  699 (795)
                          ........++..|+|||++.+  ..++.++|||||||++|||++|+.||..................   ..    
T Consensus       158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (327)
T cd08227         158 LRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIP  237 (327)
T ss_pred             ccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchh
Confidence                011122356788999999876  46899999999999999999999998653322111000000000   00    


Q ss_pred             --------------ccccc--c---cCc----cccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          700 --------------DRAWE--L---IDP----TLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       700 --------------~~~~~--~---id~----~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                                    ....+  .   ..+    .............+.+++.+||+.||++|||++|++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~  307 (327)
T cd08227         238 AEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH  307 (327)
T ss_pred             hhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence                          00000  0   000    00001112234578899999999999999999999985

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=100.00  E-value=2.9e-35  Score=310.54  Aligned_cols=250  Identities=32%  Similarity=0.478  Sum_probs=197.4

Q ss_pred             cccCcCCcccEEEeEecC-------cceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          481 NKLGEGGFGPVYKGRLLN-------GQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~~-------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      +.||+|+||.||+|+..+       ++.+|||.+.... .....++.+|+.+++.++||||+++++++......++||||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL   80 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence            469999999999998642       2579999886543 23456788999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccC----CcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCC-----Ceeeecccc
Q 003786          553 MPNKSLDFFLFDST----KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDM-----NPKISDFGM  623 (795)
Q Consensus       553 ~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~-----~vkL~DFGl  623 (795)
                      +++++|.+++....    ....+++..+..++.|++.||.|||+.+   ++|+||||+||+++.++     .+||+|||+
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~  157 (269)
T cd05044          81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH---FIHRDLAARNCLVSEKGYDADRVVKIGDFGL  157 (269)
T ss_pred             cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC---cccCCCChheEEEecCCCCCCcceEECCccc
Confidence            99999999986432    2234788899999999999999999987   99999999999999887     899999999


Q ss_pred             ccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCccc
Q 003786          624 ARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRA  702 (795)
Q Consensus       624 a~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~  702 (795)
                      +................++..|+|||++.+..++.++|||||||++|||++ |..|+......  ......    .... 
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~--~~~~~~----~~~~-  230 (269)
T cd05044         158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ--EVLQHV----TAGG-  230 (269)
T ss_pred             ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH--HHHHHH----hcCC-
Confidence            986543332222223345788999999999999999999999999999998 99888643321  111111    0000 


Q ss_pred             ccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHc
Q 003786          703 WELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT  748 (795)
Q Consensus       703 ~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~  748 (795)
                              ....+...+..+.+++.+||+.+|++||++.+|+++|.
T Consensus       231 --------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~  268 (269)
T cd05044         231 --------RLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ  268 (269)
T ss_pred             --------ccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence                    00112234567789999999999999999999999885

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.4e-35  Score=310.28  Aligned_cols=249  Identities=26%  Similarity=0.388  Sum_probs=203.0

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      ++|++.+.||.|++|.||+|+.. +++.+|+|++.... ......+.+|++++++++|+||+++++++.++...++|+||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY   80 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence            36888999999999999999865 58899999986543 33446788999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      +++++|.+++...    .+++..+..++.|++.||.|||+.+   ++|+||+|+||++++++.++|+|||++....... 
T Consensus        81 ~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-  152 (274)
T cd06609          81 CGGGSCLDLLKPG----KLDETYIAFILREVLLGLEYLHEEG---KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM-  152 (274)
T ss_pred             eCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEcccccceeecccc-
Confidence            9999999988432    6889999999999999999999988   9999999999999999999999999998765332 


Q ss_pred             cccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccc
Q 003786          633 QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQN  712 (795)
Q Consensus       633 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~  712 (795)
                       .......+++.|+|||.+.+..++.++|||||||++|+|++|..|+...+....  ...    .....     .+.+..
T Consensus       153 -~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~--~~~----~~~~~-----~~~~~~  220 (274)
T cd06609         153 -SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRV--LFL----IPKNN-----PPSLEG  220 (274)
T ss_pred             -cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHH--HHH----hhhcC-----CCCCcc
Confidence             122345788999999999888899999999999999999999999864432111  100    00000     011111


Q ss_pred             hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          713 EASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       713 ~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .   ..+..+.+++.+||+.+|++||++++++++
T Consensus       221 ~---~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~  251 (274)
T cd06609         221 N---KFSKPFKDFVSLCLNKDPKERPSAKELLKH  251 (274)
T ss_pred             c---ccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence            0   134567889999999999999999999884

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=4.6e-35  Score=310.31  Aligned_cols=239  Identities=23%  Similarity=0.332  Sum_probs=186.8

Q ss_pred             ccCcCCcccEEEeEecC-------------------------cceEEEEEecccCccchHHHHHHHHHHHhcCCccccee
Q 003786          482 KLGEGGFGPVYKGRLLN-------------------------GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRL  536 (795)
Q Consensus       482 ~LG~G~~g~Vy~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l  536 (795)
                      .||+|+||.||+|+...                         ...|++|++..........+.+|+.++++++||||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            69999999999997421                         13488998866544445678899999999999999999


Q ss_pred             eeeeeecceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCC--
Q 003786          537 LGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDM--  614 (795)
Q Consensus       537 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~--  614 (795)
                      ++++.+....++||||+++++|+.++...  .+.+++..+..++.||++||+|||+++   |+||||||+|||++..+  
T Consensus        82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~Nill~~~~~~  156 (274)
T cd05076          82 HGVCVRGSENIMVEEFVEHGPLDVCLRKE--KGRVPVAWKITVAQQLASALSYLEDKN---LVHGNVCAKNILLARLGLA  156 (274)
T ss_pred             EEEEEeCCceEEEEecCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHcCC---ccCCCCCcccEEEeccCcc
Confidence            99999999999999999999999888532  345788999999999999999999987   99999999999997654  


Q ss_pred             -----CeeeeccccccccCCCccccccccccccccccccccccc-CCCCcccchhhHHHHHHHHH-hCCCCCCCCCCcch
Q 003786          615 -----NPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETL-SSKRNTDFSNTNSL  687 (795)
Q Consensus       615 -----~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~ell-tG~~p~~~~~~~~~  687 (795)
                           .+||+|||++......      ....++..|+|||.+.+ ..++.++|||||||++|||+ +|..|+........
T Consensus       157 ~~~~~~~kl~d~g~~~~~~~~------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~  230 (274)
T cd05076         157 EGTSPFIKLSDPGVSFTALSR------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEK  230 (274)
T ss_pred             cCccceeeecCCccccccccc------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHH
Confidence                 3799999998643211      12357788999998865 56899999999999999995 68888765432221


Q ss_pred             hHhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHc
Q 003786          688 TLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT  748 (795)
Q Consensus       688 ~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~  748 (795)
                      ...  . .  ....        +..    .....+.+++.+||+.+|++||++.+|++.|+
T Consensus       231 ~~~--~-~--~~~~--------~~~----~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~  274 (274)
T cd05076         231 ERF--Y-E--KKHR--------LPE----PSCKELATLISQCLTYEPTQRPSFRTILRDLT  274 (274)
T ss_pred             HHH--H-H--hccC--------CCC----CCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence            100  0 0  0000        000    11235788999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=3.7e-35  Score=312.65  Aligned_cols=258  Identities=26%  Similarity=0.378  Sum_probs=204.2

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      .++|++.+.||+|+||.||+++.. +++.||+|++.... ....+.+.+|+++++.++||||+++++++......++|||
T Consensus         4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   83 (284)
T cd06620           4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCME   83 (284)
T ss_pred             HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEe
Confidence            357889999999999999999864 58899999886543 3345788999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      |+++++|..++..   .+.+++..+..++.+++.+|.|||+..  +++||||||+||+++.++.++|+|||++...... 
T Consensus        84 ~~~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~-  157 (284)
T cd06620          84 FMDCGSLDRIYKK---GGPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS-  157 (284)
T ss_pred             cCCCCCHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchhhh-
Confidence            9999999988743   345889999999999999999999742  3999999999999999999999999998754221 


Q ss_pred             ccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcch------hHhHhHhhhccCcccccc
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSL------TLLGHAWDLWKDDRAWEL  705 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~------~~~~~~~~~~~~~~~~~~  705 (795)
                         ......|+..|+|||.+.+..++.++|||||||++|+|++|+.||........      .............     
T Consensus       158 ---~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  229 (284)
T cd06620         158 ---IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP-----  229 (284)
T ss_pred             ---ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc-----
Confidence               12345789999999999888999999999999999999999999875432210      0011110111000     


Q ss_pred             cCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          706 IDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       706 id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                       .+.+   .....+..+.+++.+||+.+|++||++.|+++++-.
T Consensus       230 -~~~~---~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~  269 (284)
T cd06620         230 -PPRL---PSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPF  269 (284)
T ss_pred             -CCCC---CchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccc
Confidence             0001   111244568899999999999999999999997544

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=100.00  E-value=5.4e-35  Score=308.97  Aligned_cols=248  Identities=29%  Similarity=0.420  Sum_probs=193.0

Q ss_pred             cccCcCCcccEEEeEecC-cc--eEEEEEecccC-ccchHHHHHHHHHHHhc-CCcccceeeeeeeecceeeEEeecCCC
Q 003786          481 NKLGEGGFGPVYKGRLLN-GQ--EVAVKRLSSQS-GQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEEKILIYEYMPN  555 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~~-~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~  555 (795)
                      +.||+|+||.||+|+..+ +.  .+++|.+.... ....+.+.+|+++++++ +||||+++++++...+..++||||+++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH   80 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence            369999999999998754 43  46888886432 33456788999999999 799999999999999999999999999


Q ss_pred             CChhhhhhccC-------------CcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccc
Q 003786          556 KSLDFFLFDST-------------KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFG  622 (795)
Q Consensus       556 gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFG  622 (795)
                      ++|.+++....             ....+++..+..++.|++.||+|||+.+   ++||||||+||++++++.+||+|||
T Consensus        81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nili~~~~~~kl~dfg  157 (270)
T cd05047          81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFG  157 (270)
T ss_pred             CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccccceEEEcCCCeEEECCCC
Confidence            99999985432             1234788899999999999999999987   9999999999999999999999999


Q ss_pred             cccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcc
Q 003786          623 MARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDR  701 (795)
Q Consensus       623 la~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~  701 (795)
                      ++......   ........+..|+|||++....++.++|||||||++|||++ |..||.......  ....    .....
T Consensus       158 l~~~~~~~---~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~--~~~~----~~~~~  228 (270)
T cd05047         158 LSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE--LYEK----LPQGY  228 (270)
T ss_pred             Cccccchh---hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHH--HHHH----HhCCC
Confidence            98632211   11111234567999999988899999999999999999997 998885433211  1111    01110


Q ss_pred             cccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          702 AWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       702 ~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      .         ...+......+.+++.+|++.+|.+||++.++++.|..
T Consensus       229 ~---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~  267 (270)
T cd05047         229 R---------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR  267 (270)
T ss_pred             C---------CCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHH
Confidence            0         01111233467899999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=9.7e-35  Score=304.30  Aligned_cols=250  Identities=23%  Similarity=0.339  Sum_probs=200.6

Q ss_pred             CCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeec-ceeeEEee
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL-EEKILIYE  551 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lv~E  551 (795)
                      +|++.+.||+|++|.||+++.. +++.+|+|++....  ....+.+.+|++++++++|+|++++++.+... ...+++||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e   80 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG   80 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence            4889999999999999999865 47889999986432  23445788999999999999999999887644 45789999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      |+++++|.+++... ....+++..+..++.+++.||.+||+.+   |+||||||+||+++.++.++|+|||++.......
T Consensus        81 ~~~~~~l~~~l~~~-~~~~l~~~~~~~~~~~l~~~l~~lH~~~---i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~  156 (257)
T cd08223          81 FCEGGDLYHKLKEQ-KGKLLPENQVVEWFVQIAMALQYLHEKH---ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC  156 (257)
T ss_pred             ccCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCchhEEEecCCcEEEecccceEEecccC
Confidence            99999999888543 2345889999999999999999999988   9999999999999999999999999998664322


Q ss_pred             ccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcccc
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQ  711 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~  711 (795)
                        .......+++.|+|||++.+..++.++||||||+++++|++|+.|++..+....  ..   .. ..+..         
T Consensus       157 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~--~~---~~-~~~~~---------  219 (257)
T cd08223         157 --DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSL--VY---RI-IEGKL---------  219 (257)
T ss_pred             --CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHH--HH---HH-HhcCC---------
Confidence              223345689999999999999999999999999999999999999864332111  10   00 01111         


Q ss_pred             chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          712 NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       712 ~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ...+......+.+++.+|++.+|++||++.+++++
T Consensus       220 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  254 (257)
T cd08223         220 PPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ  254 (257)
T ss_pred             CCCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence            11122344578899999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=4.1e-36  Score=318.83  Aligned_cols=257  Identities=24%  Similarity=0.296  Sum_probs=202.5

Q ss_pred             HHHccCCccccccCcCCcccEEEeEecCcceEEEEEecc--cCccchHHHHHHHHHHHhcC-Ccccceeeeeeeecceee
Q 003786          471 SAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQ-HRNLVRLLGCCIELEEKI  547 (795)
Q Consensus       471 ~~~~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~  547 (795)
                      ......|++.++||+||.+.||++...+.+.||+|++..  .+.+...-|.+|+..|.+|+ |.+||+|++|-..++.+|
T Consensus       357 ~Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lY  436 (677)
T KOG0596|consen  357 KVKGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLY  436 (677)
T ss_pred             EECcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEE
Confidence            345677999999999999999999988888999987643  34556678999999999996 999999999999999999


Q ss_pred             EEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccccc
Q 003786          548 LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF  627 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~  627 (795)
                      +||||= ..+|..+|.....  .++.-.+..+..||++|+.++|+++   |||.||||.|+|+ ..|.+||+|||+|..+
T Consensus       437 mvmE~G-d~DL~kiL~k~~~--~~~~~~lk~ywkqML~aV~~IH~~g---IVHSDLKPANFLl-VkG~LKLIDFGIA~aI  509 (677)
T KOG0596|consen  437 MVMECG-DIDLNKILKKKKS--IDPDWFLKFYWKQMLLAVKTIHQHG---IVHSDLKPANFLL-VKGRLKLIDFGIANAI  509 (677)
T ss_pred             EEeecc-cccHHHHHHhccC--CCchHHHHHHHHHHHHHHHHHHHhc---eeecCCCcccEEE-EeeeEEeeeechhccc
Confidence            999973 4578888844332  2232378889999999999999998   9999999999999 5689999999999988


Q ss_pred             CCCcccccccccccccccccccccccCC-----------CCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhh
Q 003786          628 GGDELQSKTKRIVGTYGYMSPEYAQQGL-----------FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDL  696 (795)
Q Consensus       628 ~~~~~~~~~~~~~gt~~y~APE~~~~~~-----------~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~  696 (795)
                      ..+...-.....+||+.||+||.+....           .+.++||||||||||+|+.|+.||..-       . ..+. 
T Consensus       510 ~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~-------~-n~~a-  580 (677)
T KOG0596|consen  510 QPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQI-------I-NQIA-  580 (677)
T ss_pred             CccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHH-------H-HHHH-
Confidence            7766555556789999999999885432           468899999999999999999998521       1 0111 


Q ss_pred             ccCcccccccCccccchhhHH-HHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          697 WKDDRAWELIDPTLQNEASYL-ILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       697 ~~~~~~~~~id~~l~~~~~~~-~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                          ++..+++|...-+.+.. ...++++++..||+.||++||+..|+|++-
T Consensus       581 ----Kl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhp  628 (677)
T KOG0596|consen  581 ----KLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHP  628 (677)
T ss_pred             ----HHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCc
Confidence                12233444222111111 112388999999999999999999999864

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=8.9e-35  Score=309.67  Aligned_cols=264  Identities=25%  Similarity=0.311  Sum_probs=201.5

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      ++|++.+.||+|+||.||+|+.. +++.||+|++....  ....+.+.+|++++++++||||+++++++......++|||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   80 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE   80 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence            46889999999999999999875 58899999886432  2234567899999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      |+++++|+.++..   ...+++..+..++.||+.||.|||+.+   |+||||||+||+++.++.+||+|||++.......
T Consensus        81 ~~~~~~l~~~~~~---~~~~~~~~~~~~~~ql~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~  154 (286)
T cd07847          81 YCDHTVLNELEKN---PRGVPEHLIKKIIWQTLQAVNFCHKHN---CIHRDVKPENILITKQGQIKLCDFGFARILTGPG  154 (286)
T ss_pred             ccCccHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCChhhEEEcCCCcEEECccccceecCCCc
Confidence            9999999887632   335889999999999999999999987   9999999999999999999999999998764332


Q ss_pred             cccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHh-Hh--------hhccCcc
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGH-AW--------DLWKDDR  701 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~-~~--------~~~~~~~  701 (795)
                      .  ......++..|+|||.+.+ ..++.++|||||||++|+|++|+.||......+...... ..        ..+....
T Consensus       155 ~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (286)
T cd07847         155 D--DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQ  232 (286)
T ss_pred             c--cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccc
Confidence            1  1223457889999998866 568899999999999999999999987544322111100 00        0000000


Q ss_pred             c-ccccCcccc--c---hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          702 A-WELIDPTLQ--N---EASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       702 ~-~~~id~~l~--~---~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      . .....+...  .   .........+.+++.+||+.+|++||++.|++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~  283 (286)
T cd07847         233 FFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH  283 (286)
T ss_pred             ccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence            0 000000000  0   0111234678899999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=100.00  E-value=5.7e-35  Score=309.48  Aligned_cols=256  Identities=29%  Similarity=0.399  Sum_probs=202.0

Q ss_pred             cCCccccccCcCCcccEEEeEec------CcceEEEEEecccCcc-chHHHHHHHHHHHhcCCcccceeeeeeeecceee
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL------NGQEVAVKRLSSQSGQ-GQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKI  547 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  547 (795)
                      ++|++.+.||+|+||.||+|+.+      +.+.+++|.+...... ..+.+.+|++++++++||||+++++++.+.+..+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   84 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY   84 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence            57889999999999999999853      2467999988654433 3567999999999999999999999999999999


Q ss_pred             EEeecCCCCChhhhhhccCCc------ccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecc
Q 003786          548 LIYEYMPNKSLDFFLFDSTKE------NLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDF  621 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~~------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DF  621 (795)
                      +||||+++++|.+++......      ..+++..+..++.||+.||+|||+.+   |+||||||+||+++.++.++|+||
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~~~  161 (275)
T cd05046          85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR---FVHRDLAARNCLVSSQREVKVSLL  161 (275)
T ss_pred             EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC---cccCcCccceEEEeCCCcEEEccc
Confidence            999999999999998654422      25889999999999999999999988   999999999999999999999999


Q ss_pred             ccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCc
Q 003786          622 GMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDD  700 (795)
Q Consensus       622 Gla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~  700 (795)
                      |++........ .......++..|+|||.+.+..++.++||||||+++|+|++ |..|+......  ......    ...
T Consensus       162 ~~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~--~~~~~~----~~~  234 (275)
T cd05046         162 SLSKDVYNSEY-YKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE--EVLNRL----QAG  234 (275)
T ss_pred             ccccccCcccc-cccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH--HHHHHH----HcC
Confidence            99875432221 12223456788999999988888999999999999999998 67776432221  111111    111


Q ss_pred             ccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHc
Q 003786          701 RAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT  748 (795)
Q Consensus       701 ~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~  748 (795)
                      ....        ......+..+.+++.+||+.+|++||++.|++++|.
T Consensus       235 ~~~~--------~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         235 KLEL--------PVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             CcCC--------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence            1100        011123457888999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=6e-35  Score=313.79  Aligned_cols=265  Identities=23%  Similarity=0.294  Sum_probs=199.5

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      .++|++.++||+|+||.||+|+.. +++.||+|.+.... ......+.+|+.++++++||||+++++++......++|||
T Consensus         5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e   84 (301)
T cd07873           5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE   84 (301)
T ss_pred             ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEe
Confidence            367999999999999999999865 57899999986443 2334567889999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      |++ ++|..++...  ...+++..+..++.||++||.|||+.+   |+|+||||+||+++.++.+||+|||++.......
T Consensus        85 ~~~-~~l~~~l~~~--~~~~~~~~~~~~~~qi~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~  158 (301)
T cd07873          85 YLD-KDLKQYLDDC--GNSINMHNVKLFLFQLLRGLNYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPT  158 (301)
T ss_pred             ccc-cCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHHHEEECCCCcEEECcCcchhccCCCC
Confidence            998 4787777432  335788899999999999999999988   9999999999999999999999999997643221


Q ss_pred             cccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchh-HhHh--------Hhhhcc-Cc
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLT-LLGH--------AWDLWK-DD  700 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~-~~~~--------~~~~~~-~~  700 (795)
                        .......+++.|+|||.+.+ ..++.++|||||||++|||++|+.||...+..... ....        .|.... ..
T Consensus       159 --~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (301)
T cd07873         159 --KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNE  236 (301)
T ss_pred             --CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccc
Confidence              11223457899999998765 45889999999999999999999998755432111 0000        000000 00


Q ss_pred             ccccccCccccc----hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          701 RAWELIDPTLQN----EASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       701 ~~~~~id~~l~~----~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .....-.+....    .........+.++|.+||+.||.+|||+.|++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h  286 (301)
T cd07873         237 EFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH  286 (301)
T ss_pred             cccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence            000000011100    1112234467899999999999999999999985

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=2.7e-35  Score=309.15  Aligned_cols=240  Identities=24%  Similarity=0.380  Sum_probs=188.2

Q ss_pred             cccCcCCcccEEEeEecC--------cceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          481 NKLGEGGFGPVYKGRLLN--------GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      +.||+|+||.||+|....        ..++|+|.+........+.+.+|+.+++.++||||+++++++..+...++||||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   80 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY   80 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence            469999999999997532        234888887655445557788999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCC--------eeeeccccc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMN--------PKISDFGMA  624 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~--------vkL~DFGla  624 (795)
                      +++|+|..++....  ..+++..+..++.||+.||+|||+++   |+||||||+||+++.++.        ++++|||++
T Consensus        81 ~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~  155 (258)
T cd05078          81 VKFGSLDTYLKKNK--NLINISWKLEVAKQLAWALHFLEDKG---LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGIS  155 (258)
T ss_pred             CCCCcHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEEecccccccCCCceEEecccccc
Confidence            99999999985432  35788899999999999999999988   999999999999987765        699999998


Q ss_pred             cccCCCccccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCC-CCCCCCCCcchhHhHhHhhhccCccc
Q 003786          625 RIFGGDELQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSK-RNTDFSNTNSLTLLGHAWDLWKDDRA  702 (795)
Q Consensus       625 ~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~-~p~~~~~~~~~~~~~~~~~~~~~~~~  702 (795)
                      .....      .....++..|+|||++.+ ..++.++|||||||++|||++|. .|+........  ....    .. . 
T Consensus       156 ~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~--~~~~----~~-~-  221 (258)
T cd05078         156 ITVLP------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKK--LQFY----ED-R-  221 (258)
T ss_pred             cccCC------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHH--HHHH----Hc-c-
Confidence            75432      123467889999999876 46899999999999999999995 44432221111  1000    00 0 


Q ss_pred             ccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHc
Q 003786          703 WELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT  748 (795)
Q Consensus       703 ~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~  748 (795)
                      .         ..+......+.+++.+||+.+|++|||+++|++.|+
T Consensus       222 ~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~  258 (258)
T cd05078         222 H---------QLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN  258 (258)
T ss_pred             c---------cCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            0         011112246789999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.1e-35  Score=310.79  Aligned_cols=253  Identities=27%  Similarity=0.397  Sum_probs=203.1

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      .++|++.++||+|+||.||+++.. +++.+|+|++........+.+.+|++++++++||||+++++.+......++||||
T Consensus         4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (280)
T cd06611           4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF   83 (280)
T ss_pred             hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence            467999999999999999999864 5889999998766555567889999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      +++++|..++...  ...+++..+..++.|++.||.|||+.+   |+|+||||+||+++.++.++|+|||++....... 
T Consensus        84 ~~~~~L~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~-  157 (280)
T cd06611          84 CDGGALDSIMLEL--ERGLTEPQIRYVCRQMLEALNFLHSHK---VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL-  157 (280)
T ss_pred             cCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEECCCCCEEEccCccchhhcccc-
Confidence            9999999988542  245889999999999999999999998   9999999999999999999999999987543222 


Q ss_pred             cccccccccccccccccccc-----cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccC
Q 003786          633 QSKTKRIVGTYGYMSPEYAQ-----QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID  707 (795)
Q Consensus       633 ~~~~~~~~gt~~y~APE~~~-----~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id  707 (795)
                       .......+++.|+|||.+.     ...++.++|+|||||++|+|++|+.|+........  ..   . ......     
T Consensus       158 -~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~--~~---~-~~~~~~-----  225 (280)
T cd06611         158 -QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRV--LL---K-ILKSEP-----  225 (280)
T ss_pred             -cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHH--HH---H-HhcCCC-----
Confidence             1223356899999999874     34578899999999999999999999865432111  10   0 001100     


Q ss_pred             ccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          708 PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       708 ~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      +.+  ..+......+.+++..||+.+|.+||++.+++++
T Consensus       226 ~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  262 (280)
T cd06611         226 PTL--DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH  262 (280)
T ss_pred             CCc--CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence            000  0112234567789999999999999999999885

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=100.00  E-value=4.2e-35  Score=311.02  Aligned_cols=247  Identities=26%  Similarity=0.379  Sum_probs=199.9

Q ss_pred             CCccccccCcCCcccEEEeEec-CcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecC
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYM  553 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  553 (795)
                      .|+..+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++||||+++++++......++||||+
T Consensus         5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06642           5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL   84 (277)
T ss_pred             HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence            4677789999999999999864 57889999986442 233467899999999999999999999999999999999999


Q ss_pred             CCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccc
Q 003786          554 PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ  633 (795)
Q Consensus       554 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~  633 (795)
                      ++++|.+++..    ..+++..+..++.||++|+.|||+.+   ++|+||+|+||++++++.++|+|||++.......  
T Consensus        85 ~~~~L~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~--  155 (277)
T cd06642          85 GGGSALDLLKP----GPLEETYIATILREILKGLDYLHSER---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--  155 (277)
T ss_pred             CCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhcCC---eeccCCChheEEEeCCCCEEEccccccccccCcc--
Confidence            99999988732    35788899999999999999999987   9999999999999999999999999998654322  


Q ss_pred             ccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccch
Q 003786          634 SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNE  713 (795)
Q Consensus       634 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~  713 (795)
                      .......++..|+|||.+.+..++.++|||||||++|||++|+.|+..........      .....         ....
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~------~~~~~---------~~~~  220 (277)
T cd06642         156 IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLF------LIPKN---------SPPT  220 (277)
T ss_pred             hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHh------hhhcC---------CCCC
Confidence            12223468899999999998899999999999999999999999875332211100      00000         0111


Q ss_pred             hhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          714 ASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       714 ~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .....+..+.+++.+||+.+|++||++.+++++
T Consensus       221 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06642         221 LEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH  253 (277)
T ss_pred             CCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence            122344567899999999999999999999986

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=100.00  E-value=1.4e-34  Score=304.71  Aligned_cols=258  Identities=27%  Similarity=0.415  Sum_probs=206.2

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      ++|++.+.||.|+||.||+|... ++..+|+|++.... ......+.+|+++++.++|+||+++++.+...+..++|+|+
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   80 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY   80 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence            47899999999999999999864 57889999986532 23557889999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      +++++|.+++........+++..+..++.|++.||+|||+.+   |+|+||+|+||++++++.+||+|||++..+.....
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~---i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~  157 (267)
T cd06610          81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG---QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD  157 (267)
T ss_pred             cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence            999999999865444456889999999999999999999988   99999999999999999999999999986643322


Q ss_pred             c--ccccccccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcc
Q 003786          633 Q--SKTKRIVGTYGYMSPEYAQQG-LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT  709 (795)
Q Consensus       633 ~--~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~  709 (795)
                      .  .......|+..|+|||.+... .++.++|+|||||++++|++|+.|+........ ..    ......      .+.
T Consensus       158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~-~~----~~~~~~------~~~  226 (267)
T cd06610         158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKV-LM----LTLQND------PPS  226 (267)
T ss_pred             ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhh-HH----HHhcCC------CCC
Confidence            1  122345689999999998776 789999999999999999999999864432211 11    000110      001


Q ss_pred             ccchh-hHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          710 LQNEA-SYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       710 l~~~~-~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      +.... .......+.+++.+||+.+|++||++.+|+++
T Consensus       227 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~  264 (267)
T cd06610         227 LETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH  264 (267)
T ss_pred             cCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence            11101 12345677899999999999999999999874

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=5.6e-35  Score=312.62  Aligned_cols=251  Identities=24%  Similarity=0.347  Sum_probs=200.6

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecC
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYM  553 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  553 (795)
                      +.|.....||+|+||.||++... +++.||||.+........+.+.+|+.++++++||||+++++.+...+..++||||+
T Consensus        22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~  101 (292)
T cd06658          22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFL  101 (292)
T ss_pred             HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCC
Confidence            33455577999999999999864 58899999986655555677899999999999999999999999999999999999


Q ss_pred             CCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccc
Q 003786          554 PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ  633 (795)
Q Consensus       554 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~  633 (795)
                      ++++|.+++..    ..+++..+..++.||+.||.|||+++   |+||||||+||+++.++.+||+|||++.......  
T Consensus       102 ~~~~L~~~~~~----~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~--  172 (292)
T cd06658         102 EGGALTDIVTH----TRMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV--  172 (292)
T ss_pred             CCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEccCcchhhccccc--
Confidence            99999988732    34788999999999999999999988   9999999999999999999999999987653322  


Q ss_pred             ccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccch
Q 003786          634 SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNE  713 (795)
Q Consensus       634 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~  713 (795)
                      .......|+..|+|||.+.+..++.++|||||||++|||++|..|+.......  .......         .+.+.+.. 
T Consensus       173 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~--~~~~~~~---------~~~~~~~~-  240 (292)
T cd06658         173 PKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQ--AMRRIRD---------NLPPRVKD-  240 (292)
T ss_pred             ccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHh---------cCCCcccc-
Confidence            12233568999999999988889999999999999999999999986433211  1111000         01111110 


Q ss_pred             hhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          714 ASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       714 ~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                       .......+.+++.+|++.+|++|||+.|++++-
T Consensus       241 -~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~  273 (292)
T cd06658         241 -SHKVSSVLRGFLDLMLVREPSQRATAQELLQHP  273 (292)
T ss_pred             -ccccCHHHHHHHHHHccCChhHCcCHHHHhhCh
Confidence             112334677899999999999999999999863

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=100.00  E-value=4.7e-35  Score=311.87  Aligned_cols=262  Identities=23%  Similarity=0.348  Sum_probs=200.3

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccCcc--chHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQ--GQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      ++|++.++||+|+||.||+|... +++.||+|++.+....  ..+.+.+|+++++.++||||+++++++......++|+|
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE   80 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence            46889999999999999999875 4889999988653322  34568899999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      |+++++|+.+...   ...+++..+..++.||++||+|||+.+   |+|+||+|+||++++++.++|+|||++.......
T Consensus        81 ~~~~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~  154 (286)
T cd07846          81 FVDHTVLDDLEKY---PNGLDESRVRKYLFQILRGIEFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG  154 (286)
T ss_pred             cCCccHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc
Confidence            9999999887632   234889999999999999999999987   9999999999999999999999999998654332


Q ss_pred             cccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhh-----------ccC
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDL-----------WKD  699 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~-----------~~~  699 (795)
                        .......++..|+|||++.+ ..++.++|||||||++|||++|++|++.......  .......           ...
T Consensus       155 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  230 (286)
T cd07846         155 --EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQ--LYHIIKCLGNLIPRHQEIFQK  230 (286)
T ss_pred             --cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHH--HHHHHHHhCCCchhhHHHhcc
Confidence              12233567899999998865 4578899999999999999999988864432111  0000000           000


Q ss_pred             cccc-cccCccccc-----hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          700 DRAW-ELIDPTLQN-----EASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       700 ~~~~-~~id~~l~~-----~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .... ....+....     ......+..+.+++.+||+.+|++||++.+++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  283 (286)
T cd07846         231 NPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH  283 (286)
T ss_pred             chHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence            0000 000000000     0112345678899999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=5.7e-35  Score=319.61  Aligned_cols=261  Identities=21%  Similarity=0.250  Sum_probs=201.0

Q ss_pred             CCccccccCcCCcccEEEeEe-cCcceEEEEEecccCccchHHHHHHHHHHHhcC-C-----cccceeeeeeeecceeeE
Q 003786          476 NFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQ-H-----RNLVRLLGCCIELEEKIL  548 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~l~~~~~~~~~~~l  548 (795)
                      +|++.+.||+|.||.|.+|.. ++++.||||+++.. ..-..+...|+.+|..|+ |     -|+|+++++|...++.+|
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~-k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci  265 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK-KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI  265 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC-hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence            799999999999999999975 56999999999643 233456678999999997 4     489999999999999999


Q ss_pred             EeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCC--Ceeeeccccccc
Q 003786          549 IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDM--NPKISDFGMARI  626 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~--~vkL~DFGla~~  626 (795)
                      |+|.+. .+|.++|..+. ...++...+..++.||+.||..||+.+   |||+|||||||||.+..  .|||+|||.+..
T Consensus       266 VfELL~-~NLYellK~n~-f~Glsl~~ir~~~~Qil~~L~~L~~l~---IIHcDLKPENILL~~~~r~~vKVIDFGSSc~  340 (586)
T KOG0667|consen  266 VFELLS-TNLYELLKNNK-FRGLSLPLVRKFAQQILTALLFLHELG---IIHCDLKPENILLKDPKRSRIKVIDFGSSCF  340 (586)
T ss_pred             eehhhh-hhHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCChhheeeccCCcCceeEEecccccc
Confidence            999885 47888885443 345889999999999999999999988   99999999999997543  699999999987


Q ss_pred             cCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchh-HhHhH------------
Q 003786          627 FGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLT-LLGHA------------  693 (795)
Q Consensus       627 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~-~~~~~------------  693 (795)
                      .....     .....+..|.|||++.+.+|+.+.|+||||||++||++|.+-|++.++.++. .+...            
T Consensus       341 ~~q~v-----ytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~  415 (586)
T KOG0667|consen  341 ESQRV-----YTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTA  415 (586)
T ss_pred             cCCcc-----eeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhc
Confidence            54332     2456788999999999999999999999999999999998888877644431 11110            


Q ss_pred             ---hhhccC-ccc------ccc----------------cCcccc--------chhhHHHHHHHHHHHHhhccCCCCCCCC
Q 003786          694 ---WDLWKD-DRA------WEL----------------IDPTLQ--------NEASYLILNRYINVGLLCVQEDAADRPT  739 (795)
Q Consensus       694 ---~~~~~~-~~~------~~~----------------id~~l~--------~~~~~~~~~~l~~li~~cL~~dP~~RPt  739 (795)
                         ...+.. ...      .+.                .+....        ..........+++++.+||+.||.+|+|
T Consensus       416 ~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~t  495 (586)
T KOG0667|consen  416 KKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERIT  495 (586)
T ss_pred             cccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCC
Confidence               000011 000      000                000000        0011133456789999999999999999


Q ss_pred             HHHHHHHH
Q 003786          740 MFEVVSML  747 (795)
Q Consensus       740 ~~evl~~L  747 (795)
                      +.|+++|-
T Consensus       496 p~qal~Hp  503 (586)
T KOG0667|consen  496 PAQALNHP  503 (586)
T ss_pred             HHHHhcCc
Confidence            99999973

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=1.4e-34  Score=303.37  Aligned_cols=238  Identities=27%  Similarity=0.426  Sum_probs=187.6

Q ss_pred             cccCcCCcccEEEeEecCcc-----------eEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          481 NKLGEGGFGPVYKGRLLNGQ-----------EVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~~~~-----------~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      +.||+|+||.||+|......           .+++|++...... ...+.+|+.++++++||||+++++++.. ...++|
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv   78 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV   78 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence            46999999999999875432           4788877544333 6788999999999999999999999988 778999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCC-------Ceeeeccc
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDM-------NPKISDFG  622 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~-------~vkL~DFG  622 (795)
                      |||+++++|++++....  ..+++..+..++.||+.||+|||+.+   |+||||||+||+++.++       .+||+|||
T Consensus        79 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg  153 (259)
T cd05037          79 EEYVKFGPLDVFLHREK--NNVSLHWKLDVAKQLASALHYLEDKK---LVHGNVCGKNILVARYGLNEGYVPFIKLSDPG  153 (259)
T ss_pred             EEcCCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhCC---eecccCccceEEEecCccccCCceeEEeCCCC
Confidence            99999999999985433  25788899999999999999999987   99999999999999888       79999999


Q ss_pred             cccccCCCcccccccccccccccccccccccC--CCCcccchhhHHHHHHHHHhC-CCCCCCCCCcchhHhHhHhhhccC
Q 003786          623 MARIFGGDELQSKTKRIVGTYGYMSPEYAQQG--LFSIKSDVFSFGVLLLETLSS-KRNTDFSNTNSLTLLGHAWDLWKD  699 (795)
Q Consensus       623 la~~~~~~~~~~~~~~~~gt~~y~APE~~~~~--~~~~k~DvwSlGvil~elltG-~~p~~~~~~~~~~~~~~~~~~~~~  699 (795)
                      ++.....      .....++..|+|||++...  .++.++|||||||+++||++| ..|+........  .. .   +..
T Consensus       154 ~a~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~--~~-~---~~~  221 (259)
T cd05037         154 IPITVLS------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEK--ER-F---YQD  221 (259)
T ss_pred             ccccccc------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhH--HH-H---Hhc
Confidence            9986532      1224567789999998776  789999999999999999995 555543321111  00 0   000


Q ss_pred             cccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHc
Q 003786          700 DRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT  748 (795)
Q Consensus       700 ~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~  748 (795)
                      ...  .-.+         ....+.+++.+||+.+|.+||++.+|++.|+
T Consensus       222 ~~~--~~~~---------~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~  259 (259)
T cd05037         222 QHR--LPMP---------DCAELANLINQCWTYDPTKRPSFRAILRDLN  259 (259)
T ss_pred             CCC--CCCC---------CchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            000  0000         0157789999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=2.8e-35  Score=320.66  Aligned_cols=255  Identities=19%  Similarity=0.242  Sum_probs=197.7

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      ++|++.++||+|+||.||+++.. +++.||+|++.+..   ......+.+|..++..++|+||+++++++.+.+..++||
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~   80 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM   80 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            47899999999999999999865 57889999986531   223455788999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      ||+++|+|..++...  ...+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||++......
T Consensus        81 Ey~~gg~L~~~l~~~--~~~l~~~~~~~~~~qi~~~L~~lH~~~---iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~  155 (331)
T cd05624          81 DYYVGGDLLTLLSKF--EDRLPEDMARFYIAEMVLAIHSIHQLH---YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQD  155 (331)
T ss_pred             eCCCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCchHHEEEcCCCCEEEEeccceeeccCC
Confidence            999999999998542  245788899999999999999999988   999999999999999999999999999865433


Q ss_pred             ccccccccccccccccccccccc-----CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccc
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQQ-----GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWEL  705 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~~-----~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  705 (795)
                      .. .......||+.|+|||++.+     ..++.++|||||||++|||++|+.||........  ..   .......... 
T Consensus       156 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~--~~---~i~~~~~~~~-  228 (331)
T cd05624         156 GT-VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET--YG---KIMNHEERFQ-  228 (331)
T ss_pred             Cc-eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHH--HH---HHHcCCCccc-
Confidence            21 12233579999999998865     5688999999999999999999999864332111  11   1111110000 


Q ss_pred             cCccccchhhHHHHHHHHHHHHhhccCCCCC--CCCHHHHHHH
Q 003786          706 IDPTLQNEASYLILNRYINVGLLCVQEDAAD--RPTMFEVVSM  746 (795)
Q Consensus       706 id~~l~~~~~~~~~~~l~~li~~cL~~dP~~--RPt~~evl~~  746 (795)
                      +.+     ........+.+++.+||+..+.+  |+++++++++
T Consensus       229 ~p~-----~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h  266 (331)
T cd05624         229 FPS-----HITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH  266 (331)
T ss_pred             CCC-----ccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence            001     11123456778899999866554  5689999886

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-35  Score=316.49  Aligned_cols=254  Identities=25%  Similarity=0.399  Sum_probs=210.9

Q ss_pred             ccCCccccccCcCCcccEEEeEecC---cc--eEEEEEeccc-CccchHHHHHHHHHHHhcCCcccceeeeeeeecceee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLN---GQ--EVAVKRLSSQ-SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKI  547 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~---~~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  547 (795)
                      .+.....+.||+|-||.||+|.+.+   |+  .||||..+.. .....+.|..|..+|++++|||||+++|.|.+ ...+
T Consensus       388 Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~W  466 (974)
T KOG4257|consen  388 RELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMW  466 (974)
T ss_pred             hhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-ccee
Confidence            3455667889999999999997532   33  4899988763 45567899999999999999999999999864 5779


Q ss_pred             EEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccccc
Q 003786          548 LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF  627 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~  627 (795)
                      +|||.++-|.|..+|..  +...++......++.||+.||+|||++.   .|||||..+|||+...--|||+|||+++.+
T Consensus       467 ivmEL~~~GELr~yLq~--nk~sL~l~tL~ly~~Qi~talaYLeSkr---fVHRDIAaRNiLVsSp~CVKLaDFGLSR~~  541 (974)
T KOG4257|consen  467 IVMELAPLGELREYLQQ--NKDSLPLRTLTLYCYQICTALAYLESKR---FVHRDIAARNILVSSPQCVKLADFGLSRYL  541 (974)
T ss_pred             EEEecccchhHHHHHHh--ccccchHHHHHHHHHHHHHHHHHHHhhc---hhhhhhhhhheeecCcceeeecccchhhhc
Confidence            99999999999999953  3456888889999999999999999987   999999999999999999999999999988


Q ss_pred             CCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHH-hCCCCCCCCCCcchhHhHhHhhhccCccccccc
Q 003786          628 GGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETL-SSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELI  706 (795)
Q Consensus       628 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ell-tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i  706 (795)
                      ......... ...-..-|||||.+.-..++.++|||.|||.+|||+ .|..||.+-.               ...+...+
T Consensus       542 ed~~yYkaS-~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvk---------------NsDVI~~i  605 (974)
T KOG4257|consen  542 EDDAYYKAS-RGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVK---------------NSDVIGHI  605 (974)
T ss_pred             cccchhhcc-ccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccccc---------------ccceEEEe
Confidence            766654433 334467899999999999999999999999999988 5888886532               22233334


Q ss_pred             CccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          707 DPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       707 d~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      +..-+-+.++.++..+..++.+||.++|.+||++.||...|+.
T Consensus       606 EnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsd  648 (974)
T KOG4257|consen  606 ENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSD  648 (974)
T ss_pred             cCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHH
Confidence            4444556778888899999999999999999999999887654

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=3.6e-35  Score=320.04  Aligned_cols=255  Identities=20%  Similarity=0.258  Sum_probs=196.3

Q ss_pred             cCCccccccCcCCcccEEEeEecC-cceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      ++|++.++||+|+||.||+++... ++.+|+|++.+..   ......+.+|+.++..++|+||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM   80 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence            478999999999999999998654 7789999986421   223345788999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      ||+++|+|.+++...  ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++......
T Consensus        81 ey~~~g~L~~~l~~~--~~~l~~~~~~~~~~qi~~al~~lH~~~---iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~  155 (332)
T cd05623          81 DYYVGGDLLTLLSKF--EDRLPEDMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLMED  155 (332)
T ss_pred             eccCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEeecchheecccC
Confidence            999999999998542  235788899999999999999999988   999999999999999999999999998754322


Q ss_pred             cccccccccccccccccccccc-----cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccc
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQ-----QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWEL  705 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~-----~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  705 (795)
                      .. .......||+.|+|||++.     ...++.++|||||||++|||++|+.||...+....  ..   .......... 
T Consensus       156 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~--~~---~i~~~~~~~~-  228 (332)
T cd05623         156 GT-VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET--YG---KIMNHKERFQ-  228 (332)
T ss_pred             Cc-ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHH--HH---HHhCCCcccc-
Confidence            21 1223357999999999885     34689999999999999999999999865432111  11   1111110000 


Q ss_pred             cCccccchhhHHHHHHHHHHHHhhccCCCCC--CCCHHHHHHH
Q 003786          706 IDPTLQNEASYLILNRYINVGLLCVQEDAAD--RPTMFEVVSM  746 (795)
Q Consensus       706 id~~l~~~~~~~~~~~l~~li~~cL~~dP~~--RPt~~evl~~  746 (795)
                      + +    .........+.+++.+||..++.+  ||++.|++++
T Consensus       229 ~-p----~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h  266 (332)
T cd05623         229 F-P----AQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH  266 (332)
T ss_pred             C-C----CccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence            0 0    011123456778888888655444  7899999987

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=6.8e-35  Score=310.77  Aligned_cols=262  Identities=24%  Similarity=0.343  Sum_probs=202.9

Q ss_pred             HHhHHHHccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhc-CCcccceeeeeee---
Q 003786          467 LASVSAATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKL-QHRNLVRLLGCCI---  541 (795)
Q Consensus       467 ~~~i~~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~---  541 (795)
                      +..+....++|++.+.||+|+||.||+++.. +++.+|+|++.... ...+.+.+|+.+++++ +||||+++++++.   
T Consensus        10 ~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~   88 (286)
T cd06638          10 FDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKD   88 (286)
T ss_pred             eecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecc
Confidence            4455567789999999999999999999864 57899999886432 2346788999999999 6999999999874   


Q ss_pred             --ecceeeEEeecCCCCChhhhhhcc-CCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeee
Q 003786          542 --ELEEKILIYEYMPNKSLDFFLFDS-TKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKI  618 (795)
Q Consensus       542 --~~~~~~lv~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL  618 (795)
                        .+...++||||+++++|.+++... .....+++..+..++.|+++||.|||+.+   |+||||||+||+++.++.+||
T Consensus        89 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~kl  165 (286)
T cd06638          89 VKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK---TIHRDVKGNNILLTTEGGVKL  165 (286)
T ss_pred             cCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC---ccccCCCHHhEEECCCCCEEE
Confidence              345689999999999999887532 22345788899999999999999999987   999999999999999999999


Q ss_pred             eccccccccCCCccccccccccccccccccccccc-----CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhH
Q 003786          619 SDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQ-----GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHA  693 (795)
Q Consensus       619 ~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~-----~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~  693 (795)
                      +|||++........  ......|++.|+|||++..     ..++.++|||||||++|||++|+.|+........ ..   
T Consensus       166 ~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~-~~---  239 (286)
T cd06638         166 VDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRA-LF---  239 (286)
T ss_pred             ccCCceeecccCCC--ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHH-Hh---
Confidence            99999886543221  2233468999999998753     4578999999999999999999999864332111 00   


Q ss_pred             hhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          694 WDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       694 ~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                       . ..........++       ......+.+++.+||+.+|++||++.||++++
T Consensus       240 -~-~~~~~~~~~~~~-------~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~  284 (286)
T cd06638         240 -K-IPRNPPPTLHQP-------ELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV  284 (286)
T ss_pred             -h-ccccCCCcccCC-------CCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence             0 000111111111       11234678899999999999999999999864

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=1.1e-34  Score=303.78  Aligned_cols=251  Identities=26%  Similarity=0.365  Sum_probs=203.4

Q ss_pred             CCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      +|+..+.||.|+||.||.++.. +++.+++|.+....  .....++.+|++++++++|+||+++++++.+.+..+++|||
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~   80 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY   80 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence            5888999999999999999854 58899999886432  34456788999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      +++++|.+++.... ...+++..+..++.|++++|.|||+.+   ++|+||+|+||+++.++.+||+|||++........
T Consensus        81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~  156 (256)
T cd08221          81 ANGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIHKAG---ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS  156 (256)
T ss_pred             cCCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChHhEEEeCCCCEEECcCcceEEcccccc
Confidence            99999999885432 345788999999999999999999987   99999999999999999999999999986643331


Q ss_pred             cccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccc
Q 003786          633 QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQN  712 (795)
Q Consensus       633 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~  712 (795)
                        ......+++.|+|||.+.+..++.++||||||++++||++|..|++.......  ..   .. ......         
T Consensus       157 --~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~--~~---~~-~~~~~~---------  219 (256)
T cd08221         157 --MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNL--VV---KI-VQGNYT---------  219 (256)
T ss_pred             --cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHH--HH---HH-HcCCCC---------
Confidence              22345689999999999888899999999999999999999999865332211  10   00 011110         


Q ss_pred             hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          713 EASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       713 ~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                      .........+.+++.+||+.+|++||++.++++++
T Consensus       220 ~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~  254 (256)
T cd08221         220 PVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP  254 (256)
T ss_pred             CCccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence            01122345678899999999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=4e-35  Score=344.48  Aligned_cols=257  Identities=23%  Similarity=0.321  Sum_probs=198.9

Q ss_pred             HHccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeec--cee
Q 003786          472 AATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL--EEK  546 (795)
Q Consensus       472 ~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~  546 (795)
                      ....+|++.++||+|+||.||+++.. .++.+|+|++....  ......+..|+.+|++|+|||||+++++|.+.  ...
T Consensus        10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l   89 (1021)
T PTZ00266         10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL   89 (1021)
T ss_pred             cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence            44578999999999999999999865 47789999886432  23346788999999999999999999988654  568


Q ss_pred             eEEeecCCCCChhhhhhccC-CcccCChhhHHHHHHHHHHHHHHHHhcCC----CcEEeccCCCCcEEECCC--------
Q 003786          547 ILIYEYMPNKSLDFFLFDST-KENLLGWGTRVRIIEGIAQGLLYLHQYSR----LRVIHRDLKASNILLDKD--------  613 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~----~~iiHrDikp~NIll~~~--------  613 (795)
                      ++||||+++++|..+|.... ....+++..++.|+.||+.||.|||+.+.    .+||||||||+||||+.+        
T Consensus        90 yIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~  169 (1021)
T PTZ00266         90 YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT  169 (1021)
T ss_pred             EEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccc
Confidence            99999999999999885432 23568999999999999999999998541    349999999999999642        


Q ss_pred             ---------CCeeeeccccccccCCCccccccccccccccccccccccc--CCCCcccchhhHHHHHHHHHhCCCCCCCC
Q 003786          614 ---------MNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQ--GLFSIKSDVFSFGVLLLETLSSKRNTDFS  682 (795)
Q Consensus       614 ---------~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~--~~~~~k~DvwSlGvil~elltG~~p~~~~  682 (795)
                               +.+||+|||++.......   ......||+.|+|||++.+  ..++.++||||||||||||++|..||...
T Consensus       170 ~~~~n~ng~~iVKLsDFGlAr~l~~~s---~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~  246 (1021)
T PTZ00266        170 AQANNLNGRPIAKIGDFGLSKNIGIES---MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKA  246 (1021)
T ss_pred             ccccccCCCCceEEccCCccccccccc---cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcC
Confidence                     348999999998654322   2234579999999998854  46899999999999999999999998643


Q ss_pred             CCcchhHhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          683 NTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       683 ~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ..... +...    .....       .+.   .......+.+||..||+.+|.+||++.|++++
T Consensus       247 ~~~~q-li~~----lk~~p-------~lp---i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h  295 (1021)
T PTZ00266        247 NNFSQ-LISE----LKRGP-------DLP---IKGKSKELNILIKNLLNLSAKERPSALQCLGY  295 (1021)
T ss_pred             CcHHH-HHHH----HhcCC-------CCC---cCCCCHHHHHHHHHHhcCChhHCcCHHHHhcc
Confidence            32111 1111    11110       000   01123567889999999999999999999964

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=100.00  E-value=1.2e-34  Score=303.45  Aligned_cols=251  Identities=36%  Similarity=0.515  Sum_probs=199.7

Q ss_pred             CccccccCcCCcccEEEeEecC-----cceEEEEEecccCcc-chHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          477 FSTENKLGEGGFGPVYKGRLLN-----GQEVAVKRLSSQSGQ-GQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       477 ~~~~~~LG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      +++.+.||+|+||.||+++...     ++.+|+|++...... ..+.+.+|+.+++.++|+||+++++++.+.+..+++|
T Consensus         1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~   80 (258)
T smart00219        1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM   80 (258)
T ss_pred             CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence            4567899999999999998654     378999999655433 5678999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      ||+++++|.+++..... ..+++..+..++.|++.||++||+.+   ++|+||||+||+++.++.++|+|||++......
T Consensus        81 e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lh~~~---~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~  156 (258)
T smart00219       81 EYMEGGDLLDYLRKNRP-KELSLSDLLSFALQIARGMEYLESKN---FIHRDLAARNCLVGENLVVKISDFGLSRDLYDD  156 (258)
T ss_pred             eccCCCCHHHHHHhhhh-ccCCHHHHHHHHHHHHHHHHHHhcCC---eeecccccceEEEccCCeEEEcccCCceecccc
Confidence            99999999999854322 22789999999999999999999988   999999999999999999999999999876543


Q ss_pred             cccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCcc
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT  709 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~  709 (795)
                      ...... ...+++.|+|||.+....++.++||||||+++++|++ |..|+.......  .....    ......      
T Consensus       157 ~~~~~~-~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~--~~~~~----~~~~~~------  223 (258)
T smart00219      157 DYYKKK-GGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEE--VLEYL----KKGYRL------  223 (258)
T ss_pred             cccccc-cCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHH----hcCCCC------
Confidence            222111 2336789999999988889999999999999999998 777765422211  11111    111110      


Q ss_pred             ccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          710 LQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       710 l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                         ..+...+.++.+++.+||+.+|++|||+.|++++|
T Consensus       224 ---~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      224 ---PKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             ---CCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence               11112455788899999999999999999999865

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=1.1e-34  Score=314.06  Aligned_cols=198  Identities=27%  Similarity=0.402  Sum_probs=159.3

Q ss_pred             ccccCcCCcccEEEeEec---CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeee--cceeeEEeecCC
Q 003786          480 ENKLGEGGFGPVYKGRLL---NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIE--LEEKILIYEYMP  554 (795)
Q Consensus       480 ~~~LG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~E~~~  554 (795)
                      ..+||+|+||.||+|+..   +++.||+|.+...  .....+.+|+++|++++||||+++++++..  ....++|+||+.
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGT--GISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE   83 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCC--CCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence            368999999999999864   3578999998643  233568899999999999999999998854  456789999988


Q ss_pred             CCChhhhhhcc------CCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEE----CCCCCeeeeccccc
Q 003786          555 NKSLDFFLFDS------TKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILL----DKDMNPKISDFGMA  624 (795)
Q Consensus       555 ~gsL~~~l~~~------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll----~~~~~vkL~DFGla  624 (795)
                      + +|..++...      .....+++..+..++.||+.||.|||+.+   |+||||||+|||+    +.++.+||+|||++
T Consensus        84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a  159 (317)
T cd07867          84 H-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFA  159 (317)
T ss_pred             C-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence            6 555554211      12235788889999999999999999988   9999999999999    56689999999999


Q ss_pred             cccCCCccc-cccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCC
Q 003786          625 RIFGGDELQ-SKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSN  683 (795)
Q Consensus       625 ~~~~~~~~~-~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~  683 (795)
                      +........ .......||+.|+|||++.+ ..++.++|||||||++|||++|++||....
T Consensus       160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~  220 (317)
T cd07867         160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ  220 (317)
T ss_pred             eccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccccc
Confidence            876433211 12234578999999998876 468999999999999999999999986543

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-36  Score=332.09  Aligned_cols=254  Identities=29%  Similarity=0.455  Sum_probs=214.9

Q ss_pred             CCccccccCcCCcccEEEeEecC----cceEEEEEecccCc-cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          476 NFSTENKLGEGGFGPVYKGRLLN----GQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      ...+.++||.|.||.|++|+++.    ...||||.++.... ....+|..|+.||.+++||||++|.|+.......++|+
T Consensus       630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiT  709 (996)
T KOG0196|consen  630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIIT  709 (996)
T ss_pred             heEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEh
Confidence            45678899999999999998753    34599999976543 44578999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      |||++|+||.||+.+.  +.+.+.+...++++||.|++||-+++   +|||||..+||||+.+...|++||||++.+..+
T Consensus       710 EyMENGsLDsFLR~~D--GqftviQLVgMLrGIAsGMkYLsdm~---YVHRDLAARNILVNsnLvCKVsDFGLSRvledd  784 (996)
T KOG0196|consen  710 EYMENGSLDSFLRQND--GQFTVIQLVGMLRGIASGMKYLSDMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD  784 (996)
T ss_pred             hhhhCCcHHHHHhhcC--CceEeehHHHHHHHHHHHhHHHhhcC---chhhhhhhhheeeccceEEEeccccceeecccC
Confidence            9999999999996544  55889999999999999999999998   999999999999999999999999999987544


Q ss_pred             ccccccccccc--ccccccccccccCCCCcccchhhHHHHHHHHH-hCCCCCCCCCCcchhHhHhHhhhccCcccccccC
Q 003786          631 ELQSKTKRIVG--TYGYMSPEYAQQGLFSIKSDVFSFGVLLLETL-SSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID  707 (795)
Q Consensus       631 ~~~~~~~~~~g--t~~y~APE~~~~~~~~~k~DvwSlGvil~ell-tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id  707 (795)
                      . ....++..|  ..+|.|||.+....++.++|||||||+|||.+ .|.+|+-...               +.++...++
T Consensus       785 ~-~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmS---------------NQdVIkaIe  848 (996)
T KOG0196|consen  785 P-EAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS---------------NQDVIKAIE  848 (996)
T ss_pred             C-CccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccc---------------hHHHHHHHH
Confidence            3 222232333  56899999999999999999999999999977 5888864322               222333445


Q ss_pred             ccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          708 PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       708 ~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                      ..++-+.+.+++..+.+|+..|||.|..+||.+.||+.+|.+.
T Consensus       849 ~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDkl  891 (996)
T KOG0196|consen  849 QGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKL  891 (996)
T ss_pred             hccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHH
Confidence            5566677888999999999999999999999999999998773

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=9.5e-35  Score=308.61  Aligned_cols=255  Identities=27%  Similarity=0.418  Sum_probs=200.6

Q ss_pred             cCCccccccCcCCcccEEEeEecC-cc----eEEEEEecccCc-cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeE
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLN-GQ----EVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKIL  548 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~-~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  548 (795)
                      .+|++.+.||+|+||.||+|.... ++    .+|+|.+..... ...+++.+|+.++++++||||+++++++.. ...++
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~   85 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL   85 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence            578889999999999999998543 33    589998865432 345678899999999999999999999887 78899


Q ss_pred             EeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccC
Q 003786          549 IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      |+||+++++|.+++...  ...+++..+..++.||+.||+|||+.+   |+||||||+||+++.++.+||+|||+++...
T Consensus        86 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kL~dfg~~~~~~  160 (279)
T cd05057          86 ITQLMPLGCLLDYVRNH--KDNIGSQYLLNWCVQIAKGMSYLEEKR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLD  160 (279)
T ss_pred             EEecCCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC---EEecccCcceEEEcCCCeEEECCCccccccc
Confidence            99999999999998543  234889999999999999999999987   9999999999999999999999999998765


Q ss_pred             CCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccC
Q 003786          629 GDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID  707 (795)
Q Consensus       629 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id  707 (795)
                      ............++..|+|||.+....++.++|+||||+++|||++ |+.|++.......  ....    .....     
T Consensus       161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~--~~~~----~~~~~-----  229 (279)
T cd05057         161 VDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEI--PDLL----EKGER-----  229 (279)
T ss_pred             CcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHH--HHHH----hCCCC-----
Confidence            3322111112224568999999988899999999999999999998 9999865432221  1111    11100     


Q ss_pred             ccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          708 PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       708 ~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                          ...+......+.+++.+||..+|++||++.++++.|...
T Consensus       230 ----~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~  268 (279)
T cd05057         230 ----LPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKM  268 (279)
T ss_pred             ----CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence                001111224577899999999999999999999998773

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=100.00  E-value=1.6e-34  Score=306.65  Aligned_cols=248  Identities=25%  Similarity=0.377  Sum_probs=203.2

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      ..|+..++||+|+||.||+|... +++.||+|++.... ......+.+|+.+++++.||||+++++++.+....++||||
T Consensus         4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (277)
T cd06640           4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY   83 (277)
T ss_pred             HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence            45778899999999999999865 58899999986542 33456788999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      +++++|.+++..    ..+++..+..++.|++.||.|||+.+   ++|+||+|+||+++.++.++|+|||++........
T Consensus        84 ~~~~~L~~~i~~----~~l~~~~~~~~~~~l~~~l~~lh~~~---ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~  156 (277)
T cd06640          84 LGGGSALDLLRA----GPFDEFQIATMLKEILKGLDYLHSEK---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI  156 (277)
T ss_pred             CCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCcCCChhhEEEcCCCCEEEcccccceeccCCcc
Confidence            999999988843    34788889999999999999999987   99999999999999999999999999976543321


Q ss_pred             cccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccc
Q 003786          633 QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQN  712 (795)
Q Consensus       633 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~  712 (795)
                        ......++..|+|||.+.+..++.++|+|||||++|||++|..|+..........               .+......
T Consensus       157 --~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~---------------~~~~~~~~  219 (277)
T cd06640         157 --KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLF---------------LIPKNNPP  219 (277)
T ss_pred             --ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhh---------------hhhcCCCC
Confidence              2233467889999999988889999999999999999999999986433211110               00011112


Q ss_pred             hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          713 EASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       713 ~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ......+..+.+++.+||+.+|++||++.+++++
T Consensus       220 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06640         220 TLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH  253 (277)
T ss_pred             CCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence            2334456678899999999999999999999886

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=100.00  E-value=1.1e-34  Score=306.41  Aligned_cols=253  Identities=23%  Similarity=0.367  Sum_probs=200.2

Q ss_pred             cCCccccccCcCCcccEEEeEecC----cceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLN----GQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      .+|.+.+.||+|+||.||+|...+    ...+|||...... ....+.+.+|+.++++++||||+++++++.+ +..++|
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv   84 (270)
T cd05056           6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV   84 (270)
T ss_pred             hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence            568889999999999999998643    2468999886554 3445689999999999999999999998865 567899


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      |||+++++|.+++...  ...+++..+..++.|++.||.|||+.+   ++|+||||+||+++.++.+||+|||+++....
T Consensus        85 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~  159 (270)
T cd05056          85 MELAPLGELRSYLQVN--KYSLDLASLILYSYQLSTALAYLESKR---FVHRDIAARNVLVSSPDCVKLGDFGLSRYLED  159 (270)
T ss_pred             EEcCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccChheEEEecCCCeEEccCceeeeccc
Confidence            9999999999998542  234789999999999999999999987   99999999999999999999999999986644


Q ss_pred             CcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCc
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP  708 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~  708 (795)
                      ..... .....++..|+|||.+....++.++|||||||++|||++ |..||........  ....    ......     
T Consensus       160 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~--~~~~----~~~~~~-----  227 (270)
T cd05056         160 ESYYK-ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDV--IGRI----ENGERL-----  227 (270)
T ss_pred             cccee-cCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHH--HHHH----HcCCcC-----
Confidence            32211 122334568999999988889999999999999999986 9999865432211  1111    111100     


Q ss_pred             cccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          709 TLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       709 ~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                          ..+...+..+.+++.+|+..+|++|||+.++++.|..
T Consensus       228 ----~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~  264 (270)
T cd05056         228 ----PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSD  264 (270)
T ss_pred             ----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence                0112234578889999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-35  Score=322.53  Aligned_cols=241  Identities=22%  Similarity=0.276  Sum_probs=187.2

Q ss_pred             cCcCCcccEEEeEec-CcceEEEEEecccCc---cchHHHHHHHHHHHhc---CCcccceeeeeeeecceeeEEeecCCC
Q 003786          483 LGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG---QGQEEFKNEIKLIAKL---QHRNLVRLLGCCIELEEKILIYEYMPN  555 (795)
Q Consensus       483 LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~lv~E~~~~  555 (795)
                      ||+|+||.||+|+.. +++.||||++.+...   .....+..|..++..+   +||||+++++.+.+.+..++||||+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            799999999999865 589999999865322   1223445677777665   699999999999999999999999999


Q ss_pred             CChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccccc
Q 003786          556 KSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK  635 (795)
Q Consensus       556 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~  635 (795)
                      ++|..++..   ...+++..+..++.||++||+|||+++   |+||||||+|||++.++.+||+|||++.......  ..
T Consensus        81 g~L~~~l~~---~~~~~~~~~~~~~~qil~al~~LH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~--~~  152 (330)
T cd05586          81 GELFWHLQK---EGRFSEDRAKFYIAELVLALEHLHKYD---IVYRDLKPENILLDATGHIALCDFGLSKANLTDN--KT  152 (330)
T ss_pred             ChHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC--CC
Confidence            999888843   345889999999999999999999998   9999999999999999999999999987532221  12


Q ss_pred             ccccccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchh
Q 003786          636 TKRIVGTYGYMSPEYAQQG-LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEA  714 (795)
Q Consensus       636 ~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~  714 (795)
                      .....||+.|+|||++.+. .++.++|||||||++|+|++|..||........  ...    ......      .+.   
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~--~~~----i~~~~~------~~~---  217 (330)
T cd05586         153 TNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQM--YRN----IAFGKV------RFP---  217 (330)
T ss_pred             ccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHH--HHH----HHcCCC------CCC---
Confidence            3346799999999988754 589999999999999999999999865432211  110    000000      000   


Q ss_pred             hHHHHHHHHHHHHhhccCCCCCCC----CHHHHHHH
Q 003786          715 SYLILNRYINVGLLCVQEDAADRP----TMFEVVSM  746 (795)
Q Consensus       715 ~~~~~~~l~~li~~cL~~dP~~RP----t~~evl~~  746 (795)
                      .......+.+++.+||+.+|++||    ++.+++++
T Consensus       218 ~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h  253 (330)
T cd05586         218 KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEH  253 (330)
T ss_pred             CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcC
Confidence            011234667899999999999998    57777775

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=1.3e-34  Score=306.19  Aligned_cols=255  Identities=26%  Similarity=0.387  Sum_probs=198.8

Q ss_pred             CCccccccCcCCcccEEEeEec-CcceEEEEEecccCc---c-------chHHHHHHHHHHHhcCCcccceeeeeeeecc
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG---Q-------GQEEFKNEIKLIAKLQHRNLVRLLGCCIELE  544 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  544 (795)
                      +|.+.+.||+|+||.||+|... +++.+|+|.+.....   .       ..+.+.+|+.++++++||||+++++++...+
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   81 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE   81 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence            5778899999999999999754 588999998753211   0       1246788999999999999999999999999


Q ss_pred             eeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccc
Q 003786          545 EKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMA  624 (795)
Q Consensus       545 ~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla  624 (795)
                      ..++||||+++++|.+++...   ..+++..+..++.||+.||.|||+++   ++||||+|+||+++.++.++|+|||++
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~~~nil~~~~~~~~l~d~~~~  155 (272)
T cd06629          82 YLSIFLEYVPGGSIGSCLRTY---GRFEEQLVRFFTEQVLEGLAYLHSKG---ILHRDLKADNLLVDADGICKISDFGIS  155 (272)
T ss_pred             ceEEEEecCCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHhhCC---eeecCCChhhEEEcCCCeEEEeecccc
Confidence            999999999999999988543   45888899999999999999999987   999999999999999999999999999


Q ss_pred             cccCCCcccccccccccccccccccccccCC--CCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCccc
Q 003786          625 RIFGGDELQSKTKRIVGTYGYMSPEYAQQGL--FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRA  702 (795)
Q Consensus       625 ~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~--~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~  702 (795)
                      ................|+..|+|||.+....  ++.++|+||||+++++|++|..|+....... .    ..........
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~-~----~~~~~~~~~~  230 (272)
T cd06629         156 KKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIA-A----MFKLGNKRSA  230 (272)
T ss_pred             ccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHH-H----HHHhhccccC
Confidence            8654322112223356889999999887654  8999999999999999999999985322111 0    1111111100


Q ss_pred             ccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          703 WELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       703 ~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                           +.+...........+.+++.+||+.+|++||++.+|+++
T Consensus       231 -----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  269 (272)
T cd06629         231 -----PPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQH  269 (272)
T ss_pred             -----CcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence                 111111222345678889999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=100.00  E-value=1.3e-34  Score=304.83  Aligned_cols=254  Identities=27%  Similarity=0.368  Sum_probs=203.4

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      ++|+..+.||+|++|.||++... +++.+|+|++.... ....+++.+|++++++++||||+++++.+......++++||
T Consensus         1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (265)
T cd06605           1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY   80 (265)
T ss_pred             CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence            36888899999999999999875 58899999987653 23456788999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHh-cCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ-YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      +++++|.+++....  ..+++..+..++.|++.||.|||+ .+   ++|+||||+||+++.++.+||+|||.+.......
T Consensus        81 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~~---i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~  155 (265)
T cd06605          81 MDGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLHEKHK---IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL  155 (265)
T ss_pred             cCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHcCCCC---eecCCCCHHHEEECCCCCEEEeecccchhhHHHH
Confidence            99999999985432  567888999999999999999999 76   9999999999999999999999999987653221


Q ss_pred             ccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcccc
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQ  711 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~  711 (795)
                          .....++..|+|||.+.+..++.++||||||+++++|++|+.|+................... ...     +.+ 
T Consensus       156 ----~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~-----~~~-  224 (265)
T cd06605         156 ----AKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVN-EPP-----PRL-  224 (265)
T ss_pred             ----hhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhc-CCC-----CCC-
Confidence                112668899999999998899999999999999999999999986543211111111111100 000     011 


Q ss_pred             chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          712 NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       712 ~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                        ........+.++|.+||+.+|++||++.+++++
T Consensus       225 --~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  257 (265)
T cd06605         225 --PSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH  257 (265)
T ss_pred             --ChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence              011145568899999999999999999999874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=100.00  E-value=7.9e-35  Score=313.22  Aligned_cols=256  Identities=29%  Similarity=0.467  Sum_probs=198.1

Q ss_pred             ccCCccccccCcCCcccEEEeEec-Ccc----eEEEEEecccCc-cchHHHHHHHHHHHhcCCcccceeeeeeeecceee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQ----EVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKI  547 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  547 (795)
                      .++|+..+.||+|+||.||+|+.. +++    .+|+|.+..... ....++.+|+.++++++||||+++++++... ..+
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~   84 (303)
T cd05110           6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQ   84 (303)
T ss_pred             hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cce
Confidence            356888899999999999999854 344    478888865432 2234688999999999999999999998754 467


Q ss_pred             EEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccccc
Q 003786          548 LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF  627 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~  627 (795)
                      +++||+++|+|.+++...  ...+++..+..++.||+.||.|||+.+   |+||||||+||+++.++.+||+|||+++..
T Consensus        85 ~v~e~~~~g~l~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dikp~Nill~~~~~~kL~Dfg~~~~~  159 (303)
T cd05110          85 LVTQLMPHGCLLDYVHEH--KDNIGSQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLL  159 (303)
T ss_pred             eeehhcCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHhhcC---eeccccccceeeecCCCceEEccccccccc
Confidence            999999999999988532  235788899999999999999999987   999999999999999999999999999876


Q ss_pred             CCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCccccccc
Q 003786          628 GGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELI  706 (795)
Q Consensus       628 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i  706 (795)
                      .............++..|+|||.+.+..++.++|||||||++|||++ |+.|+........  ..    ........   
T Consensus       160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~--~~----~~~~~~~~---  230 (303)
T cd05110         160 EGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREI--PD----LLEKGERL---  230 (303)
T ss_pred             cCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH--HH----HHHCCCCC---
Confidence            43322222223345778999999988899999999999999999997 8888864321111  11    11111100   


Q ss_pred             CccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          707 DPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       707 d~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                            ..+......+.+++..|+..+|++||++.+++++|...
T Consensus       231 ------~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~  268 (303)
T cd05110         231 ------PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRM  268 (303)
T ss_pred             ------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence                  00111234677899999999999999999999998763

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=1.3e-34  Score=305.29  Aligned_cols=251  Identities=27%  Similarity=0.397  Sum_probs=194.0

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccCc-----cchHHHHHHHHHHHhcCCcccceeeeeeeec--cee
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG-----QGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL--EEK  546 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~  546 (795)
                      .+|+..+.||+|+||.||+|... +++.||+|++.....     ...+.+.+|+.++++++||||+++++++.+.  ...
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL   81 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence            46889999999999999999864 588999998864321     2235688899999999999999999988753  567


Q ss_pred             eEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          547 ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                      ++++||+++++|.+++..   ...+++.....++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||+++.
T Consensus        82 ~l~~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~LH~~~---i~H~~l~p~nil~~~~~~~~l~dfg~~~~  155 (266)
T cd06651          82 TIFMEYMPGGSVKDQLKA---YGALTESVTRKYTRQILEGMSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKR  155 (266)
T ss_pred             EEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCCCccc
Confidence            899999999999998843   234788889999999999999999987   99999999999999999999999999876


Q ss_pred             cCCCcc-cccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccc
Q 003786          627 FGGDEL-QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWEL  705 (795)
Q Consensus       627 ~~~~~~-~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  705 (795)
                      ...... ........++..|+|||.+.+..++.++|||||||++|||++|+.||........  ...   .....     
T Consensus       156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~--~~~---~~~~~-----  225 (266)
T cd06651         156 LQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAA--IFK---IATQP-----  225 (266)
T ss_pred             cccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHH--HHH---HhcCC-----
Confidence            532111 1112234688999999999988899999999999999999999999864321111  000   00000     


Q ss_pred             cCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          706 IDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       706 id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ..+    ..+......+..++ +|+..+|++||+++||+++
T Consensus       226 ~~~----~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h  261 (266)
T cd06651         226 TNP----QLPSHISEHARDFL-GCIFVEARHRPSAEELLRH  261 (266)
T ss_pred             CCC----CCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence            011    11222334455566 6888999999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.9e-36  Score=318.18  Aligned_cols=252  Identities=23%  Similarity=0.370  Sum_probs=204.7

Q ss_pred             cCCccccccCcCCcccEEEeEecC-cceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecC
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYM  553 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  553 (795)
                      +.|+++..||.|+||.||++..++ +--.|-|++.....+..+.+.-|++||..++||+||+|++.|..++.++++.|||
T Consensus        32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC  111 (1187)
T KOG0579|consen   32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFC  111 (1187)
T ss_pred             HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeec
Confidence            457888899999999999998654 4446778887777778889999999999999999999999999999999999999


Q ss_pred             CCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccc
Q 003786          554 PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ  633 (795)
Q Consensus       554 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~  633 (795)
                      .||-.+.++..-  ...+.+.++..+++|++.||.|||+++   |||||||..|||++-+|.|+|+|||.+.....  ..
T Consensus       112 ~GGAVDaimlEL--~r~LtE~QIqvvc~q~ldALn~LHs~~---iIHRDLKAGNiL~TldGdirLADFGVSAKn~~--t~  184 (1187)
T KOG0579|consen  112 GGGAVDAIMLEL--GRVLTEDQIQVVCYQVLDALNWLHSQN---IIHRDLKAGNILLTLDGDIRLADFGVSAKNKS--TR  184 (1187)
T ss_pred             CCchHhHHHHHh--ccccchHHHHHHHHHHHHHHHHHhhcc---hhhhhccccceEEEecCcEeeecccccccchh--HH
Confidence            999999888543  345889999999999999999999998   99999999999999999999999999864321  12


Q ss_pred             cccccccccccccccccc-----ccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCc
Q 003786          634 SKTKRIVGTYGYMSPEYA-----QQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP  708 (795)
Q Consensus       634 ~~~~~~~gt~~y~APE~~-----~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~  708 (795)
                      .....+.|||.|||||+.     +..+|+.++||||||++|.||..+.+|....+.-..  +    ..........++.|
T Consensus       185 qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRV--l----lKiaKSePPTLlqP  258 (1187)
T KOG0579|consen  185 QKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV--L----LKIAKSEPPTLLQP  258 (1187)
T ss_pred             hhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHH--H----HHHhhcCCCcccCc
Confidence            234568999999999986     457899999999999999999999988643221111  0    11111222222222


Q ss_pred             cccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          709 TLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       709 ~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                             ......+.+++..||..||..||++.++++|
T Consensus       259 -------S~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H  289 (1187)
T KOG0579|consen  259 -------SHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH  289 (1187)
T ss_pred             -------chhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence                   2345567789999999999999999999986

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=100.00  E-value=2.6e-34  Score=300.94  Aligned_cols=248  Identities=29%  Similarity=0.394  Sum_probs=200.2

Q ss_pred             CCccccccCcCCcccEEEeEec-CcceEEEEEecccC-----ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS-----GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      +|+..+.||+|++|.||+|... +++.|++|.+....     .+..+.+.+|++++++++|+||+++++++......++|
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF   80 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence            4777899999999999999875 68999999886533     12346788999999999999999999999999999999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      +||+++++|.+++...   ..+++..+..++.||++||+|||+.+   |+|+||+|+||+++.++.+||+|||++.....
T Consensus        81 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~  154 (258)
T cd06632          81 LELVPGGSLAKLLKKY---GSFPEPVIRLYTRQILLGLEYLHDRN---TVHRDIKGANILVDTNGVVKLADFGMAKQVVE  154 (258)
T ss_pred             EEecCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence            9999999999998432   34788899999999999999999988   99999999999999999999999999886543


Q ss_pred             CcccccccccccccccccccccccCC-CCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCc
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP  708 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~~~-~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~  708 (795)
                      ..   ......|+..|+|||.+.... ++.++|+|||||++|+|++|+.|+.......  ...   ........      
T Consensus       155 ~~---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~--~~~---~~~~~~~~------  220 (258)
T cd06632         155 FS---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVA--AVF---KIGRSKEL------  220 (258)
T ss_pred             cc---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHH--HHH---HHHhcccC------
Confidence            32   223456889999999887766 8999999999999999999999986433111  110   00000000      


Q ss_pred             cccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          709 TLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       709 ~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                         ...+......+.+++.+||+.+|.+||++.+++++
T Consensus       221 ---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  255 (258)
T cd06632         221 ---PPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEH  255 (258)
T ss_pred             ---CCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence               11122234567789999999999999999999874

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=100.00  E-value=1e-34  Score=309.06  Aligned_cols=263  Identities=23%  Similarity=0.294  Sum_probs=195.9

Q ss_pred             CCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      +|++.+.||+|+||.||+|+.. +|+.+|+|++....  ......+.+|++++++++||||+++++++.+....++|+||
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY   80 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence            4788899999999999999865 58899999986532  22335678899999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      +++ +|..++...  ...+++..+..++.||++||.|||+.+   |+||||||+||+++.++.+||+|||+++...... 
T Consensus        81 ~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-  153 (284)
T cd07839          81 CDQ-DLKKYFDSC--NGDIDPEIVKSFMFQLLKGLAFCHSHN---VLHRDLKPQNLLINKNGELKLADFGLARAFGIPV-  153 (284)
T ss_pred             CCC-CHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEcCCCcEEECccchhhccCCCC-
Confidence            985 666655332  345889999999999999999999988   9999999999999999999999999998654321 


Q ss_pred             cccccccccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhH----------hhhccCcc
Q 003786          633 QSKTKRIVGTYGYMSPEYAQQG-LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHA----------WDLWKDDR  701 (795)
Q Consensus       633 ~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~----------~~~~~~~~  701 (795)
                       .......+++.|+|||.+.+. .++.++|||||||++|+|++|+.|+.........+....          +.......
T Consensus       154 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (284)
T cd07839         154 -RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLP  232 (284)
T ss_pred             -CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcc
Confidence             112234578899999988664 579999999999999999999988643322211111000          00000000


Q ss_pred             ccc---ccCcccc-chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          702 AWE---LIDPTLQ-NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       702 ~~~---~id~~l~-~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ...   ....... .+........+.+++.+||+.||.+|||+.+++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h  281 (284)
T cd07839         233 DYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH  281 (284)
T ss_pred             cccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence            000   0000000 01112234677899999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=1.5e-34  Score=310.10  Aligned_cols=249  Identities=26%  Similarity=0.363  Sum_probs=199.9

Q ss_pred             CccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCCC
Q 003786          477 FSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPN  555 (795)
Q Consensus       477 ~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~  555 (795)
                      |+...+||+|+||.||++... +++.||+|.+........+.+.+|+.+++.++||||+++++++..++..++|+||+++
T Consensus        23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~  102 (297)
T cd06659          23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQG  102 (297)
T ss_pred             HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCC
Confidence            444568999999999999864 5889999998765555567788999999999999999999999999999999999999


Q ss_pred             CChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccccc
Q 003786          556 KSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK  635 (795)
Q Consensus       556 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~  635 (795)
                      ++|..++..    ..+++..+..++.||+.||.|||+.+   |+||||||+||+++.++.+||+|||++.......  ..
T Consensus       103 ~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~--~~  173 (297)
T cd06659         103 GALTDIVSQ----TRLNEEQIATVCESVLQALCYLHSQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV--PK  173 (297)
T ss_pred             CCHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHeEEccCCcEEEeechhHhhccccc--cc
Confidence            999887732    34788999999999999999999988   9999999999999999999999999987654322  12


Q ss_pred             ccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhh
Q 003786          636 TKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEAS  715 (795)
Q Consensus       636 ~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~  715 (795)
                      .....|+..|+|||++.+..++.++|||||||++|||++|+.|+........  ....    .......     .  ...
T Consensus       174 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~--~~~~----~~~~~~~-----~--~~~  240 (297)
T cd06659         174 RKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQA--MKRL----RDSPPPK-----L--KNA  240 (297)
T ss_pred             ccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHH----hccCCCC-----c--ccc
Confidence            2335689999999999988899999999999999999999999864332111  1110    0000000     0  001


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          716 YLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       716 ~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                      ......+.+++.+||+.+|++||++.+++++-
T Consensus       241 ~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~  272 (297)
T cd06659         241 HKISPVLRDFLERMLTREPQERATAQELLDHP  272 (297)
T ss_pred             CCCCHHHHHHHHHHhcCCcccCcCHHHHhhCh
Confidence            12234577899999999999999999999963

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=100.00  E-value=1.2e-34  Score=303.36  Aligned_cols=247  Identities=29%  Similarity=0.415  Sum_probs=197.7

Q ss_pred             cCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCC
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMP  554 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~  554 (795)
                      ++|++.+.||+|+||.||++.. .++.+|+|++...  ...+.+.+|+.++++++||||+++++++... ..++||||++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~   81 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCD--VTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMS   81 (254)
T ss_pred             HHceeeeeeccCCCCceEeccc-CCCceEEEeecCc--chHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCC
Confidence            5689999999999999999975 6788999998643  2346789999999999999999999998654 5799999999


Q ss_pred             CCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcccc
Q 003786          555 NKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQS  634 (795)
Q Consensus       555 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~  634 (795)
                      +++|..++.... ...+++..+..++.|+++||.|||+.+   ++||||||+||+++.++.+||+|||++......    
T Consensus        82 ~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~---~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~----  153 (254)
T cd05083          82 KGNLVNFLRTRG-RALVSVIQLLQFSLDVAEGMEYLESKK---LVHRDLAARNILVSEDGVAKVSDFGLARVGSMG----  153 (254)
T ss_pred             CCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCcEEECCCccceecccc----
Confidence            999999985432 335788899999999999999999987   999999999999999999999999998754321    


Q ss_pred             cccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCccccch
Q 003786          635 KTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNE  713 (795)
Q Consensus       635 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~  713 (795)
                       ......+..|+|||.+.+..++.++|+|||||++|||++ |+.|+........  ...    .....         ...
T Consensus       154 -~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~--~~~----~~~~~---------~~~  217 (254)
T cd05083         154 -VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEV--KEC----VEKGY---------RME  217 (254)
T ss_pred             -CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHH--HHH----HhCCC---------CCC
Confidence             112234578999999988899999999999999999997 8888764332111  111    11110         011


Q ss_pred             hhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          714 ASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       714 ~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      .....+..+.+++.+||+.+|++||++.+|++.|..
T Consensus       218 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         218 PPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             CCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence            112234567899999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=1.8e-34  Score=304.09  Aligned_cols=251  Identities=25%  Similarity=0.348  Sum_probs=196.4

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccC-----ccchHHHHHHHHHHHhcCCcccceeeeeeeec--cee
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS-----GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL--EEK  546 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~  546 (795)
                      .+|++.+.||+|+||.||+|+.. +++.||||.+....     ....+.+.+|++++++++||||+++++++.+.  ...
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL   81 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence            47899999999999999999864 58899999875321     12235788899999999999999999988764  457


Q ss_pred             eEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          547 ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                      ++||||+++++|.+++...   ..+++..+..++.|++.||.|||+.+   |+|+||||+||+++.++.+||+|||++..
T Consensus        82 ~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~Dfg~~~~  155 (265)
T cd06652          82 SIFMEHMPGGSIKDQLKSY---GALTENVTRKYTRQILEGVSYLHSNM---IVHRDIKGANILRDSVGNVKLGDFGASKR  155 (265)
T ss_pred             EEEEEecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEecCCCCEEECcCccccc
Confidence            7999999999999988432   34788889999999999999999988   99999999999999999999999999986


Q ss_pred             cCCCccc-ccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccc
Q 003786          627 FGGDELQ-SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWEL  705 (795)
Q Consensus       627 ~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  705 (795)
                      ....... .......|+..|+|||.+.+..++.++|||||||++|||++|+.|+....... ...    ......     
T Consensus       156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-~~~----~~~~~~-----  225 (265)
T cd06652         156 LQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMA-AIF----KIATQP-----  225 (265)
T ss_pred             cccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHH-HHH----HHhcCC-----
Confidence            5432111 12233568899999999988889999999999999999999999986432111 110    000000     


Q ss_pred             cCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          706 IDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       706 id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                          .....+......+.+++.+|+. +|++||+++||+++
T Consensus       226 ----~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~  261 (265)
T cd06652         226 ----TNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH  261 (265)
T ss_pred             ----CCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence                0111233445567788888985 99999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=100.00  E-value=5.6e-34  Score=300.92  Aligned_cols=254  Identities=24%  Similarity=0.365  Sum_probs=188.4

Q ss_pred             cccCcCCcccEEEeEecCc---ceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCCCC
Q 003786          481 NKLGEGGFGPVYKGRLLNG---QEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNK  556 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g  556 (795)
                      +.||+|+||.||+++..++   ..+++|.+.... ....+.+.+|+.+++.++||||+++++.+......++||||++++
T Consensus         1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~   80 (268)
T cd05086           1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG   80 (268)
T ss_pred             CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence            3699999999999975443   345677665432 234578999999999999999999999999999999999999999


Q ss_pred             ChhhhhhccCC-cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccccc
Q 003786          557 SLDFFLFDSTK-ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK  635 (795)
Q Consensus       557 sL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~  635 (795)
                      +|.+++..... ....++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++...........
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~  157 (268)
T cd05086          81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN---FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIET  157 (268)
T ss_pred             cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---eeccCCccceEEEcCCccEEecccccccccCcchhhhc
Confidence            99999864322 234566677899999999999999987   99999999999999999999999999864322221222


Q ss_pred             cccccccccccccccccc-------CCCCcccchhhHHHHHHHHHhC-CCCCCCCCCcchhHhHhHhhhccCcccccccC
Q 003786          636 TKRIVGTYGYMSPEYAQQ-------GLFSIKSDVFSFGVLLLETLSS-KRNTDFSNTNSLTLLGHAWDLWKDDRAWELID  707 (795)
Q Consensus       636 ~~~~~gt~~y~APE~~~~-------~~~~~k~DvwSlGvil~elltG-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id  707 (795)
                      .....++..|+|||++..       ..++.++|||||||++|||+++ ..|+.....  .......   . ......+.+
T Consensus       158 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~--~~~~~~~---~-~~~~~~~~~  231 (268)
T cd05086         158 EDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD--REVLNHV---I-KDQQVKLFK  231 (268)
T ss_pred             ccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHH---H-hhcccccCC
Confidence            234568899999998753       2457899999999999999975 556543221  1111111   1 111122233


Q ss_pred             ccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHc
Q 003786          708 PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT  748 (795)
Q Consensus       708 ~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~  748 (795)
                      +.+...    ....+.+++..|+ .+|++||++++|++.|.
T Consensus       232 ~~~~~~----~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         232 PQLELP----YSERWYEVLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             CccCCC----CcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence            333222    3346677888899 57999999999999885

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=100.00  E-value=2.6e-34  Score=306.12  Aligned_cols=262  Identities=24%  Similarity=0.313  Sum_probs=201.6

Q ss_pred             CCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      +|++.+.||+|+||.||+|+.. +++.||+|++....  ....+.+.+|+.++++++||||+++++++......++|+||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~   80 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY   80 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence            5888999999999999999864 58999999987543  23356789999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      + +++|.+++....  ..+++..+..++.||++||.|||+.+   ++|+||||+||+++.++.++|+|||++........
T Consensus        81 ~-~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~  154 (286)
T cd07832          81 M-PSDLSEVLRDEE--RPLPEAQVKSYMRMLLKGVAYMHANG---IMHRDLKPANLLISADGVLKIADFGLARLFSEEEP  154 (286)
T ss_pred             c-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC
Confidence            9 999998885433  45889999999999999999999988   99999999999999999999999999987643321


Q ss_pred             ccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhcc-----------Cc
Q 003786          633 QSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWK-----------DD  700 (795)
Q Consensus       633 ~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~-----------~~  700 (795)
                       .......++..|+|||.+.+ ..++.++||||+||+++||++|.+++........  .........           ..
T Consensus       155 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  231 (286)
T cd07832         155 -RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQ--LAIVFRTLGTPNEETWPGLTSL  231 (286)
T ss_pred             -CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHH--HHHHHHHcCCCChHHHhhccCc
Confidence             12233568999999998865 4578999999999999999999777754332111  111000000           00


Q ss_pred             cccccc-Ccccc----chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          701 RAWELI-DPTLQ----NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       701 ~~~~~i-d~~l~----~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ..+..+ .+...    ..........+.+++.+||+.+|++||++++++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h  282 (286)
T cd07832         232 PDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH  282 (286)
T ss_pred             chhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence            000000 00000    01112334788899999999999999999999985

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=100.00  E-value=2.2e-34  Score=304.60  Aligned_cols=255  Identities=25%  Similarity=0.379  Sum_probs=197.0

Q ss_pred             CccccccCcCCcccEEEeEec----CcceEEEEEeccc--CccchHHHHHHHHHHHhcCCcccceeeeeeeecc------
Q 003786          477 FSTENKLGEGGFGPVYKGRLL----NGQEVAVKRLSSQ--SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELE------  544 (795)
Q Consensus       477 ~~~~~~LG~G~~g~Vy~~~~~----~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------  544 (795)
                      |.+.+.||+|+||.||+|...    +++.+|||++...  .....+++.+|++++++++||||+++++++....      
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            567789999999999999753    3688999998653  2234567889999999999999999999886543      


Q ss_pred             eeeEEeecCCCCChhhhhhccC---CcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecc
Q 003786          545 EKILIYEYMPNKSLDFFLFDST---KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDF  621 (795)
Q Consensus       545 ~~~lv~E~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DF  621 (795)
                      ..++++||+++++|..++....   ....+++..+..++.||+.||+|||+.+   |+||||||+||+++.++.+||+||
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~nili~~~~~~kl~df  157 (273)
T cd05074          81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN---FIHRDLAARNCMLNENMTVCVADF  157 (273)
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccchhhEEEcCCCCEEECcc
Confidence            2368899999999988774322   1234788889999999999999999987   999999999999999999999999


Q ss_pred             ccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCc
Q 003786          622 GMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDD  700 (795)
Q Consensus       622 Gla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~  700 (795)
                      |+++...............+++.|++||.+....++.++|||||||++|||++ |+.|+......  .......   ...
T Consensus       158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~--~~~~~~~---~~~  232 (273)
T cd05074         158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS--EIYNYLI---KGN  232 (273)
T ss_pred             cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH--HHHHHHH---cCC
Confidence            99986543322222223345678999999998899999999999999999999 77777543221  1111110   000


Q ss_pred             ccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          701 RAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       701 ~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      ...          ........+.+++.+||+.+|++||++.++++.|+.
T Consensus       233 ~~~----------~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~  271 (273)
T cd05074         233 RLK----------QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLEL  271 (273)
T ss_pred             cCC----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence            000          011234578899999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=1.3e-34  Score=304.24  Aligned_cols=249  Identities=29%  Similarity=0.397  Sum_probs=189.5

Q ss_pred             cccCcCCcccEEEeEecC----cceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeee-ecceeeEEeecCC
Q 003786          481 NKLGEGGFGPVYKGRLLN----GQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCI-ELEEKILIYEYMP  554 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lv~E~~~  554 (795)
                      +.||+|+||.||+|+..+    ...+|+|.+.... ....+.+.+|+.+++.++||||+++++++. .+...++|+||++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   80 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK   80 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence            469999999999998532    4579999885432 234567889999999999999999999776 4556789999999


Q ss_pred             CCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccc-
Q 003786          555 NKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ-  633 (795)
Q Consensus       555 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~-  633 (795)
                      +++|..++....  ..+++..+..++.||++||.|||+.+   |+||||||+|||++.++.+||+|||+++........ 
T Consensus        81 ~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~  155 (262)
T cd05058          81 HGDLRNFIRSET--HNPTVKDLIGFGLQVAKGMEYLASKK---FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYS  155 (262)
T ss_pred             CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCccccccccCCccee
Confidence            999999985432  23566778899999999999999987   999999999999999999999999999755332111 


Q ss_pred             -ccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCC-CCCCCCCCcchhHhHhHhhhccCcccccccCcccc
Q 003786          634 -SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSK-RNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQ  711 (795)
Q Consensus       634 -~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~  711 (795)
                       .......++..|+|||.+.+..++.++|||||||++|||++|. +|+....  ........   ......         
T Consensus       156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~--~~~~~~~~---~~~~~~---------  221 (262)
T cd05058         156 VHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD--SFDITVYL---LQGRRL---------  221 (262)
T ss_pred             ecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC--HHHHHHHH---hcCCCC---------
Confidence             1112234577899999998888999999999999999999964 4444322  11111111   111000         


Q ss_pred             chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          712 NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       712 ~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                       ..+...+..+.+++.+||+.+|++||++.||++.|+.
T Consensus       222 -~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~  258 (262)
T cd05058         222 -LQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQ  258 (262)
T ss_pred             -CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence             0011123467899999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=2.3e-34  Score=303.47  Aligned_cols=254  Identities=26%  Similarity=0.429  Sum_probs=201.6

Q ss_pred             CCccccccCcCCcccEEEeEe-cCcceEEEEEecccCc------cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeE
Q 003786          476 NFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSG------QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKIL  548 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  548 (795)
                      +|+..+.||+|++|.||+++. .+++.+|+|++.....      ...+.+.+|++++++++|+||+++++++.+.+..++
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   80 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL   80 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence            478889999999999999985 4688999999864321      124678899999999999999999999999999999


Q ss_pred             EeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCC-Ceeeecccccccc
Q 003786          549 IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDM-NPKISDFGMARIF  627 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~-~vkL~DFGla~~~  627 (795)
                      |+||+++++|.+++..   .+.+++..+..++.||+.||.|||+.+   ++|+||+|+||+++.++ .+||+|||++...
T Consensus        81 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~ql~~al~~LH~~~---i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~  154 (268)
T cd06630          81 FVEWMAGGSVSHLLSK---YGAFKEAVIINYTEQLLRGLSYLHENQ---IIHRDVKGANLLIDSTGQRLRIADFGAAARL  154 (268)
T ss_pred             EEeccCCCcHHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccccccccc
Confidence            9999999999998843   345788999999999999999999998   99999999999998876 5999999999866


Q ss_pred             CCCccc--ccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccc
Q 003786          628 GGDELQ--SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWEL  705 (795)
Q Consensus       628 ~~~~~~--~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  705 (795)
                      ......  .......++..|+|||.+.+..++.++||||||+++++|++|..|+...........  ....         
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~--~~~~---------  223 (268)
T cd06630         155 AAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLAL--IFKI---------  223 (268)
T ss_pred             ccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHH--HHHH---------
Confidence            433111  112234688999999999888899999999999999999999999864332211111  0000         


Q ss_pred             cCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          706 IDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       706 id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .........+......+.+++.+||+.+|++||++.+++++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~  264 (268)
T cd06630         224 ASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH  264 (268)
T ss_pred             hccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence            00001122333455678889999999999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=100.00  E-value=1.7e-34  Score=312.28  Aligned_cols=267  Identities=22%  Similarity=0.282  Sum_probs=197.1

Q ss_pred             CCccccccCcCCcccEEEeEec---CcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeec--ceee
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL---NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL--EEKI  547 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~---~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~  547 (795)
                      +|++.++||+|+||.||+|+..   +++.||+|.+....   ....+.+.+|+.++++++||||+++++++.+.  ...+
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   80 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY   80 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence            4788899999999999999864   47899999997632   33446788999999999999999999999988  8899


Q ss_pred             EEeecCCCCChhhhhhccC-C-cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECC----CCCeeeecc
Q 003786          548 LIYEYMPNKSLDFFLFDST-K-ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDK----DMNPKISDF  621 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~-~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~----~~~vkL~DF  621 (795)
                      +||||+++ +|..++.... . ...+++..+..++.||+.||.|||+.+   |+||||||+||+++.    ++.+||+||
T Consensus        81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~h~dlkp~Nil~~~~~~~~~~~kl~Df  156 (316)
T cd07842          81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW---VLHRDLKPANILVMGEGPERGVVKIGDL  156 (316)
T ss_pred             EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEEcCCCCccceEEECCC
Confidence            99999986 4555543222 2 236888999999999999999999988   999999999999999    999999999


Q ss_pred             ccccccCCCcc-ccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcch-------hHhHh
Q 003786          622 GMARIFGGDEL-QSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSL-------TLLGH  692 (795)
Q Consensus       622 Gla~~~~~~~~-~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~-------~~~~~  692 (795)
                      |++........ ........+++.|+|||.+.+ ..++.++|||||||++++|++|+.|+........       .....
T Consensus       157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (316)
T cd07842         157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER  236 (316)
T ss_pred             ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence            99986543221 112234567899999998765 4689999999999999999999999875543220       00000


Q ss_pred             HhhhccC------------ccccc---ccC------ccccchhhH--HHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          693 AWDLWKD------------DRAWE---LID------PTLQNEASY--LILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       693 ~~~~~~~------------~~~~~---~id------~~l~~~~~~--~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .......            .....   ...      ..+......  ....++.+++.+||+.+|++|||+.|++++
T Consensus       237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~  313 (316)
T cd07842         237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH  313 (316)
T ss_pred             HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence            0000000            00000   000      000000111  233468899999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=100.00  E-value=4e-34  Score=306.77  Aligned_cols=261  Identities=25%  Similarity=0.317  Sum_probs=199.4

Q ss_pred             CCccccccCcCCcccEEEeEec-CcceEEEEEecccCcc-----chHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQ-----GQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      +|++.+.||+|+||.||+|... +++.||||++......     ....+..|++++++++|+||+++++++.+.+..++|
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV   80 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence            4788899999999999999864 5899999999754322     235577899999999999999999999999999999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      |||+ +++|..++....  ..+++..+..++.||++||.|||+++   |+|+||||+||+++.++.+||+|||++.....
T Consensus        81 ~e~~-~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~  154 (298)
T cd07841          81 FEFM-ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLHSNW---ILHRDLKPNNLLIASDGVLKLADFGLARSFGS  154 (298)
T ss_pred             Eccc-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCChhhEEEcCCCCEEEccceeeeeccC
Confidence            9999 899999885432  36889999999999999999999998   99999999999999999999999999987643


Q ss_pred             Cccccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCc--------
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDD--------  700 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~--------  700 (795)
                      ...  ......+++.|+|||.+.+ ..++.++|||||||++|||++|.+++.......  ............        
T Consensus       155 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  230 (298)
T cd07841         155 PNR--KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDID--QLGKIFEALGTPTEENWPGV  230 (298)
T ss_pred             CCc--cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHH--HHHHHHHHcCCCchhhhhhc
Confidence            321  1223356788999998854 567899999999999999999977775433211  111111000000        


Q ss_pred             -ccccccCcccc-----chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          701 -RAWELIDPTLQ-----NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       701 -~~~~~id~~l~-----~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                       ...........     ..........+.+++.+||+.+|++||++.|++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~  282 (298)
T cd07841         231 TSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH  282 (298)
T ss_pred             ccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence             00000000000     01112335678899999999999999999999996

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-35  Score=314.77  Aligned_cols=254  Identities=27%  Similarity=0.416  Sum_probs=213.3

Q ss_pred             cCCccccccCcCCcccEEEeEecC-cceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecC
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYM  553 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  553 (795)
                      .+....++||.|.||.||.|.++. .-.||||.++.. .-..++|..|..+|+.++|||+|+|+|+|..+...|+|+|||
T Consensus       267 tdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM  345 (1157)
T KOG4278|consen  267 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFM  345 (1157)
T ss_pred             hheeeeeccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecc
Confidence            456677899999999999998765 567999999543 455789999999999999999999999999999999999999


Q ss_pred             CCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccc
Q 003786          554 PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ  633 (795)
Q Consensus       554 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~  633 (795)
                      ..|+|.++|+...+ ..++.-..++++.||+.|+.||..++   +|||||..+|.|+.++-.|||+||||++++..+.+.
T Consensus       346 ~yGNLLdYLRecnr-~ev~avvLlyMAtQIsSaMeYLEkkn---FIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYT  421 (1157)
T KOG4278|consen  346 CYGNLLDYLRECNR-SEVPAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYT  421 (1157)
T ss_pred             cCccHHHHHHHhch-hhcchhHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhccccccceEEeeccchhhhhcCCcee
Confidence            99999999976543 34666778899999999999999998   999999999999999999999999999998766543


Q ss_pred             ccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCccccc
Q 003786          634 SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQN  712 (795)
Q Consensus       634 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~  712 (795)
                      ... ...-.+-|.|||-+.-+.++.|+|||+|||+||||.| |..|+++-+-               ..++++++..++.
T Consensus       422 AHA-GAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidl---------------SqVY~LLEkgyRM  485 (1157)
T KOG4278|consen  422 AHA-GAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---------------SQVYGLLEKGYRM  485 (1157)
T ss_pred             ccc-CccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccH---------------HHHHHHHhccccc
Confidence            221 1223567999999999999999999999999999997 6666654221               1233455556666


Q ss_pred             hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          713 EASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       713 ~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      +.+..++....+|+..||+.+|.+||++.|+-+.++.
T Consensus       486 ~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEt  522 (1157)
T KOG4278|consen  486 DGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFET  522 (1157)
T ss_pred             cCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHH
Confidence            6777788889999999999999999999999887765

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=100.00  E-value=2e-34  Score=307.26  Aligned_cols=265  Identities=23%  Similarity=0.332  Sum_probs=202.7

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      ++|++.++||+|+||.||+|... +++.||||++....  ....+.+.+|++++++++|+||+++++++...+..++|||
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e   80 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE   80 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence            36889999999999999999875 58899999886532  2334678999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      |++++.+..++.   +...+++..+..++.||++||.|||+.+   ++|+||+|+||++++++.+||+|||++.......
T Consensus        81 ~~~~~~l~~~~~---~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~  154 (288)
T cd07833          81 YVERTLLELLEA---SPGGLPPDAVRSYIWQLLQAIAYCHSHN---IIHRDIKPENILVSESGVLKLCDFGFARALRARP  154 (288)
T ss_pred             cCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEEeeecccccCCCc
Confidence            999988776653   2344789999999999999999999988   9999999999999999999999999998765433


Q ss_pred             ccccccccccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHh-HhHh--------hhccCcc
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQG-LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL-GHAW--------DLWKDDR  701 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~-~~~~--------~~~~~~~  701 (795)
                      . .......++..|+|||++... .++.++||||||+++|+|++|+.|+........... ....        ..+....
T Consensus       155 ~-~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (288)
T cd07833         155 A-SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNP  233 (288)
T ss_pred             c-ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCc
Confidence            2 122335678999999999887 889999999999999999999998865432211000 0000        0000000


Q ss_pred             cc---cccCccc----cchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          702 AW---ELIDPTL----QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       702 ~~---~~id~~l----~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ..   +..+...    ....+...+..+.++|.+||+.+|++||++++++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  285 (288)
T cd07833         234 RFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH  285 (288)
T ss_pred             cccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence            00   0000000    001112235678899999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=100.00  E-value=2.4e-34  Score=303.61  Aligned_cols=253  Identities=26%  Similarity=0.403  Sum_probs=199.3

Q ss_pred             CCccccccCcCCcccEEEeEecC--cceEEEEEecccC----------ccchHHHHHHHHHHHh-cCCcccceeeeeeee
Q 003786          476 NFSTENKLGEGGFGPVYKGRLLN--GQEVAVKRLSSQS----------GQGQEEFKNEIKLIAK-LQHRNLVRLLGCCIE  542 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~~--~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~  542 (795)
                      +|++.+.||+|+||.||+|+...  ++.+|+|.+....          .....++.+|+.++.+ ++||||+++++++.+
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   80 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE   80 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence            47888999999999999998754  6789999875321          1223456778888865 799999999999999


Q ss_pred             cceeeEEeecCCCCChhhhhhcc-CCcccCChhhHHHHHHHHHHHHHHHHh-cCCCcEEeccCCCCcEEECCCCCeeeec
Q 003786          543 LEEKILIYEYMPNKSLDFFLFDS-TKENLLGWGTRVRIIEGIAQGLLYLHQ-YSRLRVIHRDLKASNILLDKDMNPKISD  620 (795)
Q Consensus       543 ~~~~~lv~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~iiHrDikp~NIll~~~~~vkL~D  620 (795)
                      .+..++||||+++++|.+++... .....+++..+..++.|++.+|.|||+ .+   ++|+||+|+||+++.++.+||+|
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~---i~H~dl~~~nil~~~~~~~~l~d  157 (269)
T cd08528          81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR---IVHRDLTPNNIMLGEDDKVTITD  157 (269)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc---eeecCCCHHHEEECCCCcEEEec
Confidence            99999999999999998887432 233458889999999999999999996 44   99999999999999999999999


Q ss_pred             cccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCc
Q 003786          621 FGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDD  700 (795)
Q Consensus       621 FGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~  700 (795)
                      ||++.......   ......|+..|+|||.+.+..++.++||||||+++|+|++|+.|+........  ....    ...
T Consensus       158 fg~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~--~~~~----~~~  228 (269)
T cd08528         158 FGLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSL--ATKI----VEA  228 (269)
T ss_pred             ccceeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHH--HHHH----hhc
Confidence            99998754332   23345689999999999988899999999999999999999999854321111  1100    001


Q ss_pred             ccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHc
Q 003786          701 RAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT  748 (795)
Q Consensus       701 ~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~  748 (795)
                      ...    +.    ........+.+++.+||+.||++||++.|+.++++
T Consensus       229 ~~~----~~----~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         229 VYE----PL----PEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             cCC----cC----CcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence            000    00    01122356788999999999999999999999885

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.3e-34  Score=311.44  Aligned_cols=254  Identities=23%  Similarity=0.267  Sum_probs=202.5

Q ss_pred             cCCccccccCcCCcccEEEeEecC-cceEEEEEecccCcc---chHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQ---GQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      ++|++.+.||+|++|.||+++... ++.+|+|.+......   ..+.+.+|+++++.++||||+++++.+.+....++||
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   80 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM   80 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence            368899999999999999998754 899999999764322   3456889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      ||+.+++|.+++... ....+++..+..++.||++||+|||+.+   ++|+||||+||+++.++.++|+|||++......
T Consensus        81 e~~~~~~L~~~~~~~-~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~  156 (316)
T cd05574          81 DYCPGGELFRLLQRQ-PGKCLSEEVARFYAAEVLLALEYLHLLG---IVYRDLKPENILLHESGHIMLSDFDLSKQSDVE  156 (316)
T ss_pred             EecCCCCHHHHHHhC-CCCccCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChHHeEEcCCCCEEEeecchhhccccc
Confidence            999999999988532 2356889999999999999999999987   999999999999999999999999998754321


Q ss_pred             ccc---------------------------ccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCC
Q 003786          631 ELQ---------------------------SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSN  683 (795)
Q Consensus       631 ~~~---------------------------~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~  683 (795)
                      ...                           .......|+..|+|||++.+..++.++||||||+++|+|++|..||...+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~  236 (316)
T cd05574         157 PPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSN  236 (316)
T ss_pred             ccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCc
Confidence            100                           01123468899999999998889999999999999999999999986543


Q ss_pred             CcchhHhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCC----HHHHHHH
Q 003786          684 TNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPT----MFEVVSM  746 (795)
Q Consensus       684 ~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt----~~evl~~  746 (795)
                      .... +.    ......         ..-.........+.+++.+||+.+|++||+    +.|++++
T Consensus       237 ~~~~-~~----~~~~~~---------~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~  289 (316)
T cd05574         237 RDET-FS----NILKKE---------VTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH  289 (316)
T ss_pred             hHHH-HH----HHhcCC---------ccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence            2211 11    000000         000011114567889999999999999999    7888775

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=100.00  E-value=2.7e-34  Score=300.80  Aligned_cols=250  Identities=23%  Similarity=0.357  Sum_probs=201.6

Q ss_pred             CCccccccCcCCcccEEEeEec-CcceEEEEEeccc--CccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQ--SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      +|++.+.||+|+||.||+++.. +++.||+|++...  .....+++.+|+.++++++||||+++++++...+..++|+||
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY   80 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence            5888999999999999999864 5889999998643  223446789999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      +++++|.+++.... ...+++..+..++.|++.||.|||+.+   ++|+||+|+||+++.++.++|+|||++........
T Consensus        81 ~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~  156 (256)
T cd08218          81 CEGGDLYKKINAQR-GVLFPEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE  156 (256)
T ss_pred             CCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEEeeccceeecCcchh
Confidence            99999988885422 234688899999999999999999987   99999999999999999999999999986543221


Q ss_pred             cccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccc
Q 003786          633 QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQN  712 (795)
Q Consensus       633 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~  712 (795)
                        ......|++.|+|||++.+..++.++|+|||||++++|++|+.|+........  ..   .... +..         .
T Consensus       157 --~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~--~~---~~~~-~~~---------~  219 (256)
T cd08218         157 --LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNL--VL---KIIR-GSY---------P  219 (256)
T ss_pred             --hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHH--HH---HHhc-CCC---------C
Confidence              12234688999999999888899999999999999999999999864332111  10   0000 000         0


Q ss_pred             hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          713 EASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       713 ~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ..+......+.+++.+||+.+|++||++.+|+++
T Consensus       220 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~  253 (256)
T cd08218         220 PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK  253 (256)
T ss_pred             CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence            1122334568899999999999999999999984

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=100.00  E-value=3.2e-34  Score=306.56  Aligned_cols=261  Identities=25%  Similarity=0.340  Sum_probs=202.4

Q ss_pred             HHhHHHHccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhc-CCcccceeeeeeeecc
Q 003786          467 LASVSAATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELE  544 (795)
Q Consensus       467 ~~~i~~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~  544 (795)
                      +.++....++|++.+.||+|+||.||+++.. +++.+|+|++.... ...+.+.+|+.+++++ +|||++++++++...+
T Consensus        14 ~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~   92 (291)
T cd06639          14 LESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKAD   92 (291)
T ss_pred             cccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEecc
Confidence            3445556789999999999999999999864 58899999986432 2346788999999999 7999999999987543


Q ss_pred             -----eeeEEeecCCCCChhhhhhccC-CcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeee
Q 003786          545 -----EKILIYEYMPNKSLDFFLFDST-KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKI  618 (795)
Q Consensus       545 -----~~~lv~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL  618 (795)
                           ..++||||+++++|.+++.... ....+++..+..++.|++.||.|||+.+   |+||||||+||+++.++.+||
T Consensus        93 ~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~nili~~~~~~kl  169 (291)
T cd06639          93 KLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR---IIHRDVKGNNILLTTEGGVKL  169 (291)
T ss_pred             ccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEEE
Confidence                 5799999999999998875322 2345889999999999999999999987   999999999999999999999


Q ss_pred             eccccccccCCCcccccccccccccccccccccccC-----CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhH
Q 003786          619 SDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG-----LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHA  693 (795)
Q Consensus       619 ~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-----~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~  693 (795)
                      +|||++........  ......|+..|+|||.+...     .++.++|||||||++|||++|+.|+........ ..   
T Consensus       170 ~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~-~~---  243 (291)
T cd06639         170 VDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKT-LF---  243 (291)
T ss_pred             eecccchhcccccc--cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHH-HH---
Confidence            99999886543221  12234688999999987543     368999999999999999999999864322111 11   


Q ss_pred             hhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          694 WDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       694 ~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                       .. .......+.+       +......+.++|.+||+.+|++||++.|++++
T Consensus       244 -~~-~~~~~~~~~~-------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~  287 (291)
T cd06639         244 -KI-PRNPPPTLLH-------PEKWCRSFNHFISQCLIKDFEARPSVTHLLEH  287 (291)
T ss_pred             -HH-hcCCCCCCCc-------ccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence             10 1111111111       11233468899999999999999999999975

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=100.00  E-value=4.1e-34  Score=299.23  Aligned_cols=249  Identities=26%  Similarity=0.389  Sum_probs=200.6

Q ss_pred             CCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      +|+..+.||+|+||.||++... +++.+|||.+....  ....+.+.+|++++++++||||+++++.+...+..++||||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY   80 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence            5888999999999999999864 58899999986542  23456788999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCC-CeeeeccccccccCCCc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDM-NPKISDFGMARIFGGDE  631 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~-~vkL~DFGla~~~~~~~  631 (795)
                      +++++|.+++.... ...+++..+..++.+++++|.|||+++   |+|+||||+||+++.++ .+||+|||++.......
T Consensus        81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~  156 (256)
T cd08220          81 APGGTLAEYIQKRC-NSLLDEDTILHFFVQILLALHHVHTKL---ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS  156 (256)
T ss_pred             CCCCCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc
Confidence            99999999985432 345788999999999999999999987   99999999999998654 57999999998764322


Q ss_pred             ccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcccc
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQ  711 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~  711 (795)
                         ......++..|+|||.+.+..++.++||||||+++++|++|+.|++.......  ....    .....         
T Consensus       157 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~--~~~~----~~~~~---------  218 (256)
T cd08220         157 ---KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPAL--VLKI----MSGTF---------  218 (256)
T ss_pred             ---cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHH--HHHH----HhcCC---------
Confidence               12235688999999999988899999999999999999999999865432221  1110    00000         


Q ss_pred             chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          712 NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       712 ~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ...+......+.+++.+||+.+|++|||+.|++++
T Consensus       219 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~  253 (256)
T cd08220         219 APISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ  253 (256)
T ss_pred             CCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence            01111234567899999999999999999999974

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=100.00  E-value=5.7e-34  Score=353.80  Aligned_cols=260  Identities=27%  Similarity=0.431  Sum_probs=208.0

Q ss_pred             ccCCccccccCcCCcccEEEeEe-cCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          474 TANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      ...+...+.||+|+||.||+|+. .+++.||||++.....    ...+|++++++++|||||+++++|.+.+..++||||
T Consensus       689 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey  764 (968)
T PLN00113        689 LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS----IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEY  764 (968)
T ss_pred             HhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc----ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeC
Confidence            35677888999999999999986 4689999999864322    223568899999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      +++|+|.+++.      .++|..+.+++.||++||+|||..+..+|+||||||+||+++.++.+++. |+.......   
T Consensus       765 ~~~g~L~~~l~------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~---  834 (968)
T PLN00113        765 IEGKNLSEVLR------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT---  834 (968)
T ss_pred             CCCCcHHHHHh------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc---
Confidence            99999999983      27899999999999999999996655569999999999999999888875 665543221   


Q ss_pred             cccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccc
Q 003786          633 QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQN  712 (795)
Q Consensus       633 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~  712 (795)
                         .....+|+.|||||++.+..++.|+|||||||++|||++|+.|++...........+.............+++.+..
T Consensus       835 ---~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  911 (968)
T PLN00113        835 ---DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRG  911 (968)
T ss_pred             ---CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccC
Confidence               12236889999999999999999999999999999999999998644333333444433333333344445555432


Q ss_pred             --hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          713 --EASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       713 --~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                        .....+..++.+++.+|++.+|++||+|+||+++|+..
T Consensus       912 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~  951 (968)
T PLN00113        912 DVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESA  951 (968)
T ss_pred             CCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHh
Confidence              23445666788999999999999999999999999874

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=1.7e-34  Score=307.12  Aligned_cols=259  Identities=25%  Similarity=0.406  Sum_probs=200.5

Q ss_pred             HHhHHHHccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhc-CCcccceeeeeeee--
Q 003786          467 LASVSAATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIE--  542 (795)
Q Consensus       467 ~~~i~~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~--  542 (795)
                      +..+..+.+.|++.+.||+|+||.||+|+.. +++.+|+|++.... ....++..|+.+++++ +||||+++++++..  
T Consensus         8 ~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~   86 (282)
T cd06636           8 LSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKS   86 (282)
T ss_pred             hhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhccc
Confidence            3344456688999999999999999999864 58899999885542 3446788999999998 69999999999863  


Q ss_pred             ----cceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeee
Q 003786          543 ----LEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKI  618 (795)
Q Consensus       543 ----~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL  618 (795)
                          ....+++|||+++++|.+++.... ...+++..+..++.||+.||.|||+.+   |+|+||||+||+++.++.++|
T Consensus        87 ~~~~~~~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dl~~~nili~~~~~~~l  162 (282)
T cd06636          87 PPGHDDQLWLVMEFCGAGSVTDLVKNTK-GNALKEDWIAYICREILRGLAHLHAHK---VIHRDIKGQNVLLTENAEVKL  162 (282)
T ss_pred             ccCCCCEEEEEEEeCCCCcHHHHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEE
Confidence                457799999999999999885432 344778888999999999999999988   999999999999999999999


Q ss_pred             eccccccccCCCcccccccccccccccccccccc-----cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhH
Q 003786          619 SDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ-----QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHA  693 (795)
Q Consensus       619 ~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~-----~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~  693 (795)
                      +|||++.......  .......|++.|+|||.+.     ...++.++|||||||++|||++|..||......... ..  
T Consensus       163 ~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~-~~--  237 (282)
T cd06636         163 VDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRAL-FL--  237 (282)
T ss_pred             eeCcchhhhhccc--cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhh-hh--
Confidence            9999987543221  1223456899999999875     356888999999999999999999998543211110 00  


Q ss_pred             hhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          694 WDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       694 ~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                        . ....     .+.+   .....+..+.+++.+||+.+|.+||++.||+++
T Consensus       238 --~-~~~~-----~~~~---~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~  279 (282)
T cd06636         238 --I-PRNP-----PPKL---KSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH  279 (282)
T ss_pred             --H-hhCC-----CCCC---cccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence              0 0000     0000   111234578899999999999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.1e-34  Score=303.27  Aligned_cols=256  Identities=28%  Similarity=0.400  Sum_probs=201.4

Q ss_pred             HHccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhc-CCcccceeeeeeeecc-----
Q 003786          472 AATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELE-----  544 (795)
Q Consensus       472 ~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~-----  544 (795)
                      ...++|++.+.||+|++|.||+|+.. +++.+++|++.... ...+.+.+|+.+++++ +|+||+++++++....     
T Consensus         3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (275)
T cd06608           3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE-DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND   81 (275)
T ss_pred             CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc-hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence            35688999999999999999999875 57889999986543 3456799999999999 6999999999997654     


Q ss_pred             -eeeEEeecCCCCChhhhhhccC-CcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccc
Q 003786          545 -EKILIYEYMPNKSLDFFLFDST-KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFG  622 (795)
Q Consensus       545 -~~~lv~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFG  622 (795)
                       ..++||||+++++|.+++.... ....+++..+..++.|++.||.|||+.+   ++|+||+|+||+++.++.+||+|||
T Consensus        82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~~l~p~ni~~~~~~~~~l~d~~  158 (275)
T cd06608          82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK---VIHRDIKGQNILLTKNAEVKLVDFG  158 (275)
T ss_pred             eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEEccCCeEEECCCc
Confidence             4899999999999998885432 2456889999999999999999999988   9999999999999999999999999


Q ss_pred             cccccCCCccccccccccccccccccccccc-----CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhc
Q 003786          623 MARIFGGDELQSKTKRIVGTYGYMSPEYAQQ-----GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLW  697 (795)
Q Consensus       623 la~~~~~~~~~~~~~~~~gt~~y~APE~~~~-----~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~  697 (795)
                      ++.......  .......|+..|+|||++..     ..++.++|||||||++|+|++|..|+........ ...     .
T Consensus       159 ~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~~~-----~  230 (275)
T cd06608         159 VSAQLDSTL--GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRA-LFK-----I  230 (275)
T ss_pred             cceecccch--hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHH-HHH-----h
Confidence            987653222  12233568999999998753     3578899999999999999999999864321111 110     0


Q ss_pred             cCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          698 KDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       698 ~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .....     +.+  ..+......+.+++.+||..||++|||+.+++++
T Consensus       231 ~~~~~-----~~~--~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~  272 (275)
T cd06608         231 PRNPP-----PTL--KSPENWSKKFNDFISECLIKNYEQRPFMEELLEH  272 (275)
T ss_pred             hccCC-----CCC--CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence            01100     011  1122245678899999999999999999999874

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3.7e-35  Score=317.59  Aligned_cols=252  Identities=28%  Similarity=0.372  Sum_probs=208.4

Q ss_pred             cCCccccccCcCCcccEEEeEec--Ccc--eEEEEEecccCcc-chHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL--NGQ--EVAVKRLSSQSGQ-GQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      ++..+.++||+|.||+|++|.+.  .|+  .||||.+...... ....|.+|+.+|.+|+|||+|+|||+..+ ....+|
T Consensus       110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV  188 (1039)
T KOG0199|consen  110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMV  188 (1039)
T ss_pred             HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHH
Confidence            45667789999999999999764  344  5899999765444 56789999999999999999999999887 788999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      +|.++.|+|.+.|++ .....+.......++.|||.|+.||..++   +|||||..+|+||-..-.|||+||||.+.++.
T Consensus       189 ~ELaplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLeskr---lvHRDLAARNlllasprtVKI~DFGLmRaLg~  264 (1039)
T KOG0199|consen  189 FELAPLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLESKR---LVHRDLAARNLLLASPRTVKICDFGLMRALGE  264 (1039)
T ss_pred             hhhcccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhhhh---hhhhhhhhhhheecccceeeeecccceeccCC
Confidence            999999999999977 45567888899999999999999999987   99999999999999999999999999998765


Q ss_pred             Cccc-ccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccC
Q 003786          630 DELQ-SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID  707 (795)
Q Consensus       630 ~~~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id  707 (795)
                      .+.. .......-...|+|||.++...++.++|||+|||+||||++ |..||.+....+               +.+.+|
T Consensus       265 ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~q---------------IL~~iD  329 (1039)
T KOG0199|consen  265 NEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQ---------------ILKNID  329 (1039)
T ss_pred             CCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHH---------------HHHhcc
Confidence            4322 22222334678999999999999999999999999999997 566765433221               223444


Q ss_pred             ccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          708 PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       708 ~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ..-+-..+..+++++++++..||..+|++|||+..|.+.
T Consensus       330 ~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~  368 (1039)
T KOG0199|consen  330 AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRED  368 (1039)
T ss_pred             ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence            333444566788999999999999999999999999854

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=100.00  E-value=4.2e-34  Score=305.57  Aligned_cols=265  Identities=23%  Similarity=0.268  Sum_probs=196.9

Q ss_pred             HccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCcc-chHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQ-GQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      ++.+|.+.+.||+|+||.||+|... +++.||+|++...... ....+.+|+.+++.++|+||+++++++..+...++|+
T Consensus         3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~   82 (291)
T cd07870           3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF   82 (291)
T ss_pred             ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence            3578999999999999999999864 5889999998654322 3346789999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      ||+. +++...+...  ...+++..+..++.||+.||.|||+.+   |+|+||||+||+++.++.+||+|||+++.....
T Consensus        83 e~~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~  156 (291)
T cd07870          83 EYMH-TDLAQYMIQH--PGGLHPYNVRLFMFQLLRGLAYIHGQH---ILHRDLKPQNLLISYLGELKLADFGLARAKSIP  156 (291)
T ss_pred             eccc-CCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEEcCCCcEEEeccccccccCCC
Confidence            9996 5665555322  234677888899999999999999988   999999999999999999999999998754322


Q ss_pred             ccccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCc---------
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDD---------  700 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~---------  700 (795)
                      ..  ......+++.|+|||.+.+ ..++.++|||||||++|||++|..||+........+. ..+......         
T Consensus       157 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  233 (291)
T cd07870         157 SQ--TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLE-KIWTVLGVPTEDTWPGVS  233 (291)
T ss_pred             CC--CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHH-HHHHHcCCCChhhhhhhh
Confidence            11  1223457899999998875 4588999999999999999999999875443222111 111111100         


Q ss_pred             ---c-cccccCccccchh-----hHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          701 ---R-AWELIDPTLQNEA-----SYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       701 ---~-~~~~id~~l~~~~-----~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                         . .............     .......+.+++.+|++.+|++|||+.|++.+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h  288 (291)
T cd07870         234 KLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH  288 (291)
T ss_pred             hcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence               0 0000000000000     00113466789999999999999999999864

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=100.00  E-value=3.1e-34  Score=301.32  Aligned_cols=254  Identities=27%  Similarity=0.399  Sum_probs=201.3

Q ss_pred             CCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeee--cceeeEEe
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIE--LEEKILIY  550 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~  550 (795)
                      +|++.+.||.|+||.||++... +++.+|+|++....  ....+.+.+|++++++++||||+++++++..  ....+++|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM   80 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence            5788899999999999999854 57899999986432  2334568899999999999999999998764  45678999


Q ss_pred             ecCCCCChhhhhhccC-CcccCChhhHHHHHHHHHHHHHHHHhcC--CCcEEeccCCCCcEEECCCCCeeeecccccccc
Q 003786          551 EYMPNKSLDFFLFDST-KENLLGWGTRVRIIEGIAQGLLYLHQYS--RLRVIHRDLKASNILLDKDMNPKISDFGMARIF  627 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~--~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~  627 (795)
                      ||+++++|.+++.... ....+++..+..++.||++||.|||..+  ..+|+|+||||+||+++.++.+||+|||++...
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~  160 (265)
T cd08217          81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL  160 (265)
T ss_pred             hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence            9999999999885432 2456889999999999999999999332  234999999999999999999999999999876


Q ss_pred             CCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccC
Q 003786          628 GGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID  707 (795)
Q Consensus       628 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id  707 (795)
                      .....  ......+++.|+|||.+....++.++|+||||+++++|++|..|+......  ......    ....      
T Consensus       161 ~~~~~--~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~~~~~----~~~~------  226 (265)
T cd08217         161 GHDSS--FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQL--QLASKI----KEGK------  226 (265)
T ss_pred             cCCcc--cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHH--HHHHHH----hcCC------
Confidence            54331  123356899999999998888999999999999999999999998754411  111111    1111      


Q ss_pred             ccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          708 PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       708 ~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                         ....+......+.+++.+||+.+|++||++.+|+++
T Consensus       227 ---~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~  262 (265)
T cd08217         227 ---FRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL  262 (265)
T ss_pred             ---CCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence               111222345678899999999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=8.9e-34  Score=302.55  Aligned_cols=261  Identities=26%  Similarity=0.358  Sum_probs=201.1

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccCc-cchHHHHHHHHHHHhcCCcccceeeeeeeec--ceeeEEe
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL--EEKILIY  550 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~  550 (795)
                      ++|+..++||.|++|.||++... +++.+|+|++..... ....++.+|++++++++||||+++++++.+.  ...++||
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   80 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM   80 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence            36888899999999999999875 588899999875432 3456789999999999999999999998654  4679999


Q ss_pred             ecCCCCChhhhhhccC-CcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          551 EYMPNKSLDFFLFDST-KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      ||+++++|.+++.... ....+++..+..++.||++||.|||+.+   ++|+||+|+||+++.++.++|+|||++.....
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~  157 (287)
T cd06621          81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK---IIHRDIKPSNILLTRKGQVKLCDFGVSGELVN  157 (287)
T ss_pred             EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence            9999999988774322 2345788899999999999999999988   99999999999999999999999999875432


Q ss_pred             CcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcc
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT  709 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~  709 (795)
                      ..    .....++..|+|||.+.+..++.++|||||||++|+|++|..|++................ .......+.+. 
T Consensus       158 ~~----~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-  231 (287)
T cd06621         158 SL----AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYI-VNMPNPELKDE-  231 (287)
T ss_pred             cc----cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHH-hcCCchhhccC-
Confidence            21    1234578899999999989999999999999999999999999876532111111111000 01011111100 


Q ss_pred             ccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          710 LQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       710 l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ..  ........+.+++.+||+.+|++|||+.||+++
T Consensus       232 ~~--~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~  266 (287)
T cd06621         232 PG--NGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH  266 (287)
T ss_pred             CC--CCCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence            00  001234578899999999999999999999984

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=100.00  E-value=5.1e-34  Score=305.35  Aligned_cols=251  Identities=26%  Similarity=0.392  Sum_probs=204.3

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      ..+|++.+.||+|+||.||++... +++.||+|.+........+.+.+|+.++++++||||+++++.+...+..++|+||
T Consensus        18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~   97 (293)
T cd06647          18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEY   97 (293)
T ss_pred             hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEec
Confidence            468999999999999999999754 5789999998765555567889999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      +++++|.+++..    ..+++..+..++.|++.||.|||+.+   ++|+||||+||+++.++.+||+|||++........
T Consensus        98 ~~~~~L~~~~~~----~~l~~~~~~~i~~~l~~al~~LH~~g---i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~  170 (293)
T cd06647          98 LAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS  170 (293)
T ss_pred             CCCCcHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhCC---EeeccCCHHHEEEcCCCCEEEccCcceeccccccc
Confidence            999999998843    34778899999999999999999988   99999999999999999999999999876543321


Q ss_pred             cccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccc
Q 003786          633 QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQN  712 (795)
Q Consensus       633 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~  712 (795)
                        ......+++.|+|||.+.+..++.++|+|||||++|+|++|+.||...........     ......      +.  .
T Consensus       171 --~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~-----~~~~~~------~~--~  235 (293)
T cd06647         171 --KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL-----IATNGT------PE--L  235 (293)
T ss_pred             --ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheee-----hhcCCC------CC--C
Confidence              22334688999999999888899999999999999999999999865432111000     000000      00  0


Q ss_pred             hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          713 EASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       713 ~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ..+......+.+++.+||+.+|++||++.+++.+
T Consensus       236 ~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h  269 (293)
T cd06647         236 QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH  269 (293)
T ss_pred             CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            1122234567789999999999999999999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=100.00  E-value=3.7e-34  Score=304.76  Aligned_cols=262  Identities=24%  Similarity=0.321  Sum_probs=197.2

Q ss_pred             CCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      +|+..+.||.|++|.||+|+.. +++.||||++....  ......+.+|++++++++||||+++++++.+.+..++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF   80 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence            4788999999999999999865 58899999886432  22345788999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      +. ++|..++.... ...+++..+..++.||+.||+|||+.+   ++|+||+|+||+++.++.+||+|||++....... 
T Consensus        81 ~~-~~l~~~~~~~~-~~~l~~~~~~~~~~~i~~~l~~lh~~~---i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~-  154 (284)
T cd07860          81 LH-QDLKKFMDASP-LSGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-  154 (284)
T ss_pred             cc-cCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEeeccchhhcccCc-
Confidence            96 57877774432 345888999999999999999999987   9999999999999999999999999987654321 


Q ss_pred             cccccccccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhc-cCcc---------
Q 003786          633 QSKTKRIVGTYGYMSPEYAQQG-LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLW-KDDR---------  701 (795)
Q Consensus       633 ~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~-~~~~---------  701 (795)
                       .......+++.|+|||.+.+. .++.++|||||||++|||++|+.||........ ......... ....         
T Consensus       155 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  232 (284)
T cd07860         155 -RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ-LFRIFRTLGTPDEVVWPGVTSLP  232 (284)
T ss_pred             -cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHHHhCCCChhhhhhhhHHH
Confidence             112233568899999988664 468899999999999999999999865432211 111000000 0000         


Q ss_pred             -----cccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          702 -----AWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       702 -----~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                           ........+ ..........+.+++.+||+.||++||++++++++
T Consensus       233 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~  281 (284)
T cd07860         233 DYKPSFPKWARQDF-SKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH  281 (284)
T ss_pred             HHHhhcccccccCH-HHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence                 000000000 01111233567789999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=100.00  E-value=3.5e-34  Score=306.12  Aligned_cols=245  Identities=26%  Similarity=0.314  Sum_probs=200.8

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      ++|++.+.||+|+||.||+++.. +++.+|+|++....   ....+.+.+|++++++++||||+++++++.+....++||
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   80 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM   80 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence            46889999999999999999865 58999999986532   223467889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      ||+++++|.+++...   ..+++..+..++.||++||.|||+.+   |+|+||+|+||+++.++.+||+|||++......
T Consensus        81 e~~~~~~L~~~~~~~---~~l~~~~~~~~~~qil~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~  154 (290)
T cd05580          81 EYVPGGELFSHLRKS---GRFPEPVARFYAAQVVLALEYLHSLD---IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR  154 (290)
T ss_pred             ecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEeeCCCccccCCC
Confidence            999999999888433   46889999999999999999999988   999999999999999999999999999875433


Q ss_pred             cccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccc
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL  710 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l  710 (795)
                           .....+++.|+|||.+.+..++.++||||||+++|+|++|..|+.......  ....    .....         
T Consensus       155 -----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~----~~~~~---------  214 (290)
T cd05580         155 -----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQ--IYEK----ILEGK---------  214 (290)
T ss_pred             -----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH--HHHH----HhcCC---------
Confidence                 233568999999999988889999999999999999999999986543111  1100    00110         


Q ss_pred             cchhhHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHH
Q 003786          711 QNEASYLILNRYINVGLLCVQEDAADRP-----TMFEVVSM  746 (795)
Q Consensus       711 ~~~~~~~~~~~l~~li~~cL~~dP~~RP-----t~~evl~~  746 (795)
                       ...+......+.+++.+||+.+|.+||     +++|++++
T Consensus       215 -~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~  254 (290)
T cd05580         215 -VRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNH  254 (290)
T ss_pred             -ccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcC
Confidence             011122345778899999999999999     88888765

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=100.00  E-value=3.2e-34  Score=301.35  Aligned_cols=251  Identities=27%  Similarity=0.382  Sum_probs=206.2

Q ss_pred             cCCccccccCcCCcccEEEeEecC-cceEEEEEecccCc-cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      ++|++.+.||+|++|.||+++... ++.|+||++..... .....+.+|+.++.+++|+||+++++++......++||||
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY   80 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence            368889999999999999998764 89999999876543 3457899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHh-cCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ-YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      +++++|.+++...   ..+++..+..++.|+++||.|||+ .+   ++|+||+|+||+++.++.++|+|||++.......
T Consensus        81 ~~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lh~~~~---~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~  154 (264)
T cd06623          81 MDGGSLADLLKKV---GKIPEPVLAYIARQILKGLDYLHTKRH---IIHRDIKPSNLLINSKGEVKIADFGISKVLENTL  154 (264)
T ss_pred             cCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHhccCC---CccCCCCHHHEEECCCCCEEEccCccceecccCC
Confidence            9999999998543   568899999999999999999999 87   9999999999999999999999999998764333


Q ss_pred             ccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCC-cchhHhHhHhhhccCcccccccCccc
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNT-NSLTLLGHAWDLWKDDRAWELIDPTL  710 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~id~~l  710 (795)
                      ..  .....++..|+|||.+....++.++|+||||+++|+|++|..|+..... .........   . ....        
T Consensus       155 ~~--~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~---~-~~~~--------  220 (264)
T cd06623         155 DQ--CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAI---C-DGPP--------  220 (264)
T ss_pred             Cc--ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHH---h-cCCC--------
Confidence            21  1235688999999999988999999999999999999999999865542 111111111   1 1100        


Q ss_pred             cchhhHH-HHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          711 QNEASYL-ILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       711 ~~~~~~~-~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                       ...+.. .+..+.+++.+||+.+|++||++.+++++
T Consensus       221 -~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~  256 (264)
T cd06623         221 -PSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH  256 (264)
T ss_pred             -CCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence             111122 45678899999999999999999999985

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=100.00  E-value=4.8e-34  Score=305.08  Aligned_cols=264  Identities=24%  Similarity=0.332  Sum_probs=197.0

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCc-cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      .++|++.+.||+|++|.||+|+.. +++.||||.+..... .....+.+|++++++++||||+++++++.+.+..++|||
T Consensus         4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   83 (291)
T cd07844           4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFE   83 (291)
T ss_pred             ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEe
Confidence            367999999999999999999865 588999999865432 223457789999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      |+++ +|.+++....  ..+++..+..++.|+++||.|||+.+   |+||||||+||+++.++.+||+|||+++......
T Consensus        84 ~~~~-~L~~~~~~~~--~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~  157 (291)
T cd07844          84 YLDT-DLKQYMDDCG--GGLSMHNVRLFLFQLLRGLAYCHQRR---VLHRDLKPQNLLISERGELKLADFGLARAKSVPS  157 (291)
T ss_pred             cCCC-CHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCHHHEEEcCCCCEEECccccccccCCCC
Confidence            9985 8888775332  35788999999999999999999988   9999999999999999999999999987543211


Q ss_pred             cccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCc--ccc-----
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDD--RAW-----  703 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~--~~~-----  703 (795)
                      .  ......++..|+|||.+.+ ..++.++||||+||++|+|++|+.||......... ....+......  ..+     
T Consensus       158 ~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  234 (291)
T cd07844         158 K--TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQ-LHKIFRVLGTPTEETWPGVSS  234 (291)
T ss_pred             c--cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHH-HHHHHHhcCCCChhhhhhhhh
Confidence            1  1122346889999998865 56899999999999999999999998654421111 11111111000  000     


Q ss_pred             --c-------ccCccccchhhHHH--HHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          704 --E-------LIDPTLQNEASYLI--LNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       704 --~-------~id~~l~~~~~~~~--~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                        +       ...+..........  ...+.+++.+||+.+|++||++.|++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~  288 (291)
T cd07844         235 NPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH  288 (291)
T ss_pred             ccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence              0       00000000000011  1566789999999999999999999864

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=100.00  E-value=1.1e-33  Score=297.31  Aligned_cols=253  Identities=28%  Similarity=0.433  Sum_probs=201.1

Q ss_pred             CCccccccCcCCcccEEEeEec-CcceEEEEEecccCcc--chHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQ--GQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      +|++.+.||+|+||.||+|... +++.|++|.+......  ..+.+.+|++++++++|+||+++++.+...+..++|+||
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY   80 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence            5788899999999999999864 6889999998765443  567889999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      +++++|.+++..   ...+++..+..++.++++||.|||+.+   |+|+||+|+||+++.++.+||+|||++........
T Consensus        81 ~~~~~L~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~  154 (264)
T cd06626          81 CSGGTLEELLEH---GRILDEHVIRVYTLQLLEGLAYLHSHG---IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTT  154 (264)
T ss_pred             CCCCcHHHHHhh---cCCCChHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEcccccccccCCCCC
Confidence            999999998853   334788899999999999999999988   99999999999999999999999999987643322


Q ss_pred             ccc--ccccccccccccccccccCC---CCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccC
Q 003786          633 QSK--TKRIVGTYGYMSPEYAQQGL---FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID  707 (795)
Q Consensus       633 ~~~--~~~~~gt~~y~APE~~~~~~---~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id  707 (795)
                      ...  .....+++.|+|||++....   ++.++||||||+++++|++|+.||........... ..  . . ..     .
T Consensus       155 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~-~~--~-~-~~-----~  224 (264)
T cd06626         155 TMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMF-HV--G-A-GH-----K  224 (264)
T ss_pred             cccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHH-HH--h-c-CC-----C
Confidence            111  12356788999999987765   89999999999999999999999864432111111 00  0 0 00     0


Q ss_pred             ccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          708 PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       708 ~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      +.+.  ........+.+++.+||+.+|++||++.+++.+
T Consensus       225 ~~~~--~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~  261 (264)
T cd06626         225 PPIP--DSLQLSPEGKDFLDRCLESDPKKRPTASELLQH  261 (264)
T ss_pred             CCCC--cccccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            0010  011124556789999999999999999999863

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=100.00  E-value=3.1e-34  Score=300.81  Aligned_cols=248  Identities=25%  Similarity=0.270  Sum_probs=202.5

Q ss_pred             CCccccccCcCCcccEEEeEec-CcceEEEEEecccCc---cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG---QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      +|++.+.||+|+||.||+|+.. +++.||+|++.+...   ...+.+.+|++++++++||||+++++++.+....++|+|
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD   80 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence            4888999999999999999875 589999999975432   345688999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      |+.+++|.+++...   ..+++..+..++.||++||.|||+.+   ++|+||+|+||++++++.++|+|||++.......
T Consensus        81 ~~~~~~L~~~l~~~---~~l~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~  154 (258)
T cd05578          81 LLLGGDLRYHLSQK---VKFSEEQVKFWICEIVLALEYLHSKG---IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT  154 (258)
T ss_pred             CCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEEcCCCCEEEeecccccccCCCc
Confidence            99999999988433   46889999999999999999999988   9999999999999999999999999998654332


Q ss_pred             ccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcccc
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQ  711 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~  711 (795)
                         ......|+..|+|||.+....++.++|+||||+++|+|++|..|+..............   ...          ..
T Consensus       155 ---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~---~~~----------~~  218 (258)
T cd05578         155 ---LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAK---QET----------AD  218 (258)
T ss_pred             ---cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHH---hcc----------cc
Confidence               22335688899999999888899999999999999999999999876543211111110   000          00


Q ss_pred             chhhHHHHHHHHHHHHhhccCCCCCCCCH--HHHHH
Q 003786          712 NEASYLILNRYINVGLLCVQEDAADRPTM--FEVVS  745 (795)
Q Consensus       712 ~~~~~~~~~~l~~li~~cL~~dP~~RPt~--~evl~  745 (795)
                      ...+...+..+.+++.+||+.+|.+||++  +|+++
T Consensus       219 ~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~  254 (258)
T cd05578         219 VLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKN  254 (258)
T ss_pred             ccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhc
Confidence            11222234678899999999999999999  77654

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=5.4e-35  Score=290.95  Aligned_cols=252  Identities=24%  Similarity=0.327  Sum_probs=201.4

Q ss_pred             cccCcCCcccEEEeE-ecCcceEEEEEecccCccchHHHHHHHHHHHhcC-CcccceeeeeeeecceeeEEeecCCCCCh
Q 003786          481 NKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQ-HRNLVRLLGCCIELEEKILIYEYMPNKSL  558 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~E~~~~gsL  558 (795)
                      +.||+|+|+.|-.+. +.++++||||++.+.......++.+|++++...+ |+||++|+++|++++..|||||.|.||+|
T Consensus        84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGpl  163 (463)
T KOG0607|consen   84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPL  163 (463)
T ss_pred             HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchH
Confidence            679999999999986 6789999999999988888899999999999996 99999999999999999999999999999


Q ss_pred             hhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCC---CeeeeccccccccCCC-----
Q 003786          559 DFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDM---NPKISDFGMARIFGGD-----  630 (795)
Q Consensus       559 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~---~vkL~DFGla~~~~~~-----  630 (795)
                      ..+|   .+++.+++.++.+++.+|+.||.+||.+|   |.||||||+|||..+..   -|||+||.|..-....     
T Consensus       164 LshI---~~~~~F~E~EAs~vvkdia~aLdFlH~kg---IAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~sp  237 (463)
T KOG0607|consen  164 LSHI---QKRKHFNEREASRVVKDIASALDFLHTKG---IAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSP  237 (463)
T ss_pred             HHHH---HHhhhccHHHHHHHHHHHHHHHHHHhhcC---cccccCCccceeecCCCCcCceeeeccccccccccCCCCCC
Confidence            9998   44566899999999999999999999999   99999999999996554   4899999987643211     


Q ss_pred             ccccccccccccccccccccc-----ccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcc----
Q 003786          631 ELQSKTKRIVGTYGYMSPEYA-----QQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDR----  701 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~-----~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~----  701 (795)
                      .......+.+|+.+|||||+.     ....|+.++|.||||||||-|++|.+||-+.-..+.        -|..++    
T Consensus       238 astP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dC--------GWdrGe~Cr~  309 (463)
T KOG0607|consen  238 ASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADC--------GWDRGEVCRV  309 (463)
T ss_pred             CCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcC--------CccCCCccHH
Confidence            111223346899999999975     234689999999999999999999999965432221        011111    


Q ss_pred             ----cccccCcc---ccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          702 ----AWELIDPT---LQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       702 ----~~~~id~~---l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                          +++-|...   +.+.-...+..+..++|...|..++.+|.++.+++++
T Consensus       310 CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnh  361 (463)
T KOG0607|consen  310 CQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNH  361 (463)
T ss_pred             HHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCC
Confidence                11111111   1122334456677899999999999999999999874

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=5.5e-34  Score=306.93  Aligned_cols=256  Identities=20%  Similarity=0.254  Sum_probs=199.0

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccCc---cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG---QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      ++|++.+.||+|+||.||+++.. .++.||+|.+.....   ...+.+.+|+++++.++||||+++++.+...+..++||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM   80 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence            36889999999999999999865 478999999865432   23456789999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      ||+++++|.+++..   ...+++..+..++.|+++||.|||+.+   ++||||||+||+++.++.+||+|||+++.....
T Consensus        81 e~~~g~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~  154 (305)
T cd05609          81 EYVEGGDCATLLKN---IGALPVDMARMYFAETVLALEYLHNYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMS  154 (305)
T ss_pred             ecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHEEECCCCCEEEeeCCCccccCcC
Confidence            99999999999843   245888999999999999999999987   999999999999999999999999998742110


Q ss_pred             cc-------------cccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhc
Q 003786          631 EL-------------QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLW  697 (795)
Q Consensus       631 ~~-------------~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~  697 (795)
                      ..             ........++..|+|||.+.+..++.++|+|||||++|||++|..||.......  .....    
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~--~~~~~----  228 (305)
T cd05609         155 LTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE--LFGQV----  228 (305)
T ss_pred             ccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHH----
Confidence            00             001112457889999999988889999999999999999999999986432211  11110    


Q ss_pred             cCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          698 KDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       698 ~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      ....   ...+.    .....+..+.+++.+||+.+|++||++.++.+.|+.
T Consensus       229 ~~~~---~~~~~----~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~  273 (305)
T cd05609         229 ISDD---IEWPE----GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH  273 (305)
T ss_pred             Hhcc---cCCCC----ccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence            0000   00010    001234567899999999999999997666666555

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=100.00  E-value=9.8e-34  Score=301.39  Aligned_cols=265  Identities=25%  Similarity=0.338  Sum_probs=200.8

Q ss_pred             CCccccccCcCCcccEEEeEec-CcceEEEEEecccCc-cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecC
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYM  553 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  553 (795)
                      +|++.++||+|++|.||+|+.. +++.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM   80 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence            5888999999999999999975 588999999875432 23467788999999999999999999999999999999999


Q ss_pred             CCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccc
Q 003786          554 PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ  633 (795)
Q Consensus       554 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~  633 (795)
                      ++ +|.+++........+++..+..++.||+.||.|||+.+   ++||||||+||++++++.+||+|||++.......  
T Consensus        81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~--  154 (284)
T cd07836          81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR---VLHRDLKPQNLLINKRGELKLADFGLARAFGIPV--  154 (284)
T ss_pred             Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc--
Confidence            86 77777755444456899999999999999999999988   9999999999999999999999999997653221  


Q ss_pred             cccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHh-HhH--------hhhccCcccc
Q 003786          634 SKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL-GHA--------WDLWKDDRAW  703 (795)
Q Consensus       634 ~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~-~~~--------~~~~~~~~~~  703 (795)
                      .......+++.|+|||.+.+ ..++.++|||||||++|+|++|..|+........... ...        +..+......
T Consensus       155 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (284)
T cd07836         155 NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEY  234 (284)
T ss_pred             cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchh
Confidence            11223457889999998765 4578999999999999999999999875543221100 000        0000000000


Q ss_pred             cccCccc----cchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          704 ELIDPTL----QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       704 ~~id~~l----~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ....+..    ...........+.+++.+|++.+|.+||++.|++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~  281 (284)
T cd07836         235 KPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH  281 (284)
T ss_pred             cccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            0000000    011112334577899999999999999999999864

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=100.00  E-value=7.2e-34  Score=304.28  Aligned_cols=264  Identities=24%  Similarity=0.303  Sum_probs=196.5

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcC-Ccccceeeeeeeecce-----
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQ-HRNLVRLLGCCIELEE-----  545 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~-----  545 (795)
                      ++|++.+.||+|+||.||+|+.. +++.||||++....  ......+.+|+.+++++. ||||+++++++...+.     
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~   80 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS   80 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence            46889999999999999999865 58899999886542  223467888999999995 6999999999887766     


Q ss_pred             eeEEeecCCCCChhhhhhccCC--cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECC-CCCeeeeccc
Q 003786          546 KILIYEYMPNKSLDFFLFDSTK--ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDK-DMNPKISDFG  622 (795)
Q Consensus       546 ~~lv~E~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~-~~~vkL~DFG  622 (795)
                      .++||||+++ +|..++.....  ...+++..+..++.||++||.|||+.+   |+||||||+||+++. ++.+||+|||
T Consensus        81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~~~nil~~~~~~~~kl~dfg  156 (295)
T cd07837          81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG---VMHRDLKPQNLLVDKQKGLLKIADLG  156 (295)
T ss_pred             EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEecCCCeEEEeecc
Confidence            7999999986 78777754322  346889999999999999999999988   999999999999998 8999999999


Q ss_pred             cccccCCCccccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhcc--C
Q 003786          623 MARIFGGDELQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWK--D  699 (795)
Q Consensus       623 la~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~--~  699 (795)
                      ++..+....  .......+++.|+|||++.+ ..++.++|||||||++|+|++|..||...........  ......  .
T Consensus       157 ~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~--~~~~~~~~~  232 (295)
T cd07837         157 LGRAFSIPV--KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLH--IFKLLGTPT  232 (295)
T ss_pred             cceecCCCc--cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHH--HHHHhCCCC
Confidence            988653221  11122356889999998865 4679999999999999999999999875432221110  000000  0


Q ss_pred             ccccc-c---c----Ccccc----chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          700 DRAWE-L---I----DPTLQ----NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       700 ~~~~~-~---i----d~~l~----~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ...+. .   .    -+...    ....+.....+.++|.+||+.+|.+||++.|++.+
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~  291 (295)
T cd07837         233 EQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH  291 (295)
T ss_pred             hhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence            00000 0   0    00000    01112345678899999999999999999999874

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=100.00  E-value=1.2e-33  Score=295.51  Aligned_cols=252  Identities=27%  Similarity=0.379  Sum_probs=206.3

Q ss_pred             CCccccccCcCCcccEEEeEec-CcceEEEEEecccCc--cchHHHHHHHHHHHhcCCcccceeeeeeeec--ceeeEEe
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG--QGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL--EEKILIY  550 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~  550 (795)
                      +|+..+.||+|++|.||+|... +++.+++|++.....  ...+.+.+|+.++++++||||+++++.+.+.  ...++|+
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~   80 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL   80 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence            4778899999999999999876 688999999865542  4467889999999999999999999999988  8899999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      ||+++++|.+++....   .+++..+..++.|+++||.|||+.+   ++|+||+|+||+++.++.+||+|||.+......
T Consensus        81 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~~~---~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~  154 (260)
T cd06606          81 EYVSGGSLSSLLKKFG---KLPEPVIRKYTRQILEGLAYLHSNG---IVHRDIKGANILVDSDGVVKLADFGCAKRLGDI  154 (260)
T ss_pred             EecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEcccccEEecccc
Confidence            9999999999985432   6889999999999999999999987   999999999999999999999999999876544


Q ss_pred             cccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccc
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL  710 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l  710 (795)
                      ..........++..|+|||.+....++.++||||||+++++|++|..|+........    ..+....         ...
T Consensus       155 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~----~~~~~~~---------~~~  221 (260)
T cd06606         155 ETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMA----ALYKIGS---------SGE  221 (260)
T ss_pred             cccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH----HHHhccc---------cCC
Confidence            321123345688999999999888899999999999999999999999876541111    1111110         011


Q ss_pred             cchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       711 ~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ....+......+.+++.+|++.+|++||++.+++++
T Consensus       222 ~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~  257 (260)
T cd06606         222 PPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQH  257 (260)
T ss_pred             CcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence            112223335678899999999999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=100.00  E-value=1e-33  Score=305.46  Aligned_cols=273  Identities=26%  Similarity=0.332  Sum_probs=200.9

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCc--cchHHHHHHHHHHHhcCCcccceeeeeeeec--ceeeE
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG--QGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL--EEKIL  548 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l  548 (795)
                      .++|++.+.||+|+||.||+|+.. +++.||+|++.....  .....+.+|+.++++++|+||+++++++...  +..++
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL   85 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence            467999999999999999999864 589999999864322  2234567899999999999999999998755  46899


Q ss_pred             EeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccC
Q 003786          549 IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      ||||+.+ +|..++...  ...+++..+..++.||++||.|||+.+   ++||||||+||+++.++.+||+|||++....
T Consensus        86 v~e~~~~-~l~~~l~~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~  159 (309)
T cd07845          86 VMEYCEQ-DLASLLDNM--PTPFSESQVKCLMLQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLARTYG  159 (309)
T ss_pred             EEecCCC-CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccceeeecC
Confidence            9999975 677776432  245889999999999999999999998   9999999999999999999999999998764


Q ss_pred             CCccccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccC--cccc--
Q 003786          629 GDELQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKD--DRAW--  703 (795)
Q Consensus       629 ~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~--~~~~--  703 (795)
                      ...  .......+++.|+|||.+.+ ..++.++|||||||++|||++|+.||...+....  +.........  ...+  
T Consensus       160 ~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~--~~~~~~~~~~~~~~~~~~  235 (309)
T cd07845         160 LPA--KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQ--LDLIIQLLGTPNESIWPG  235 (309)
T ss_pred             Ccc--CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHhcCCCChhhchh
Confidence            332  11222345788999998865 5689999999999999999999999875442221  1111010000  0000  


Q ss_pred             -------ccc--Cccccchh---hHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccccCCCCC
Q 003786          704 -------ELI--DPTLQNEA---SYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPH  756 (795)
Q Consensus       704 -------~~i--d~~l~~~~---~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~~~l~~  756 (795)
                             ...  ........   .......+.++|.+||+.||++|||+.|++++--....++|.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~~~~  300 (309)
T cd07845         236 FSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKPLPC  300 (309)
T ss_pred             hhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCCCCC
Confidence                   000  00000000   011245667899999999999999999999975444444443

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=100.00  E-value=6.9e-34  Score=302.44  Aligned_cols=252  Identities=25%  Similarity=0.376  Sum_probs=193.9

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccC-ccchHHHHHHHHH-HHhcCCcccceeeeeeeecceeeEEee
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS-GQGQEEFKNEIKL-IAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      ++|++.+.||+|+||.||+++.. +|+.||+|++.... .....++..|+.+ ++.++||||+++++++......++|||
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e   80 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME   80 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence            46889999999999999999865 58999999986543 2234456666665 566789999999999999999999999


Q ss_pred             cCCCCChhhhhhcc-CCcccCChhhHHHHHHHHHHHHHHHHhc-CCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          552 YMPNKSLDFFLFDS-TKENLLGWGTRVRIIEGIAQGLLYLHQY-SRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       552 ~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      |++ ++|..++... .....+++..+..++.||+.||+|||++ +   ++||||||+||+++.++.+||+|||++.....
T Consensus        81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~---i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~  156 (283)
T cd06617          81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS---VIHRDVKPSNVLINRNGQVKLCDFGISGYLVD  156 (283)
T ss_pred             hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence            997 5777766432 2335689999999999999999999986 5   99999999999999999999999999986532


Q ss_pred             Cccccccccccccccccccccccc----CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccc
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQ----GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWEL  705 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~----~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  705 (795)
                      ..   ......++..|+|||.+.+    ..++.++|+|||||++|+|++|+.|+.........+.    .... ...   
T Consensus       157 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~----~~~~-~~~---  225 (283)
T cd06617         157 SV---AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLK----QVVE-EPS---  225 (283)
T ss_pred             cc---ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHH----HHHh-cCC---
Confidence            21   1223468899999998854    4578999999999999999999999864322111111    0000 000   


Q ss_pred             cCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          706 IDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       706 id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                        +.+   .....+..+.+++.+||+.+|++||++.+++++
T Consensus       226 --~~~---~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~  261 (283)
T cd06617         226 --PQL---PAEKFSPEFQDFVNKCLKKNYKERPNYPELLQH  261 (283)
T ss_pred             --CCC---CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence              111   011234568899999999999999999999884

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=100.00  E-value=1.4e-33  Score=293.69  Aligned_cols=250  Identities=28%  Similarity=0.442  Sum_probs=204.5

Q ss_pred             CCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCC
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMP  554 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~  554 (795)
                      +|+..+.||+|++|.||++... +++.+++|++..........+.+|++++++++|+||+++++.+......++++||++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~   80 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS   80 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence            4788899999999999999875 688999999976655566789999999999999999999999999999999999999


Q ss_pred             CCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcccc
Q 003786          555 NKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQS  634 (795)
Q Consensus       555 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~  634 (795)
                      +++|.+++....  ..+++..+..++.|++.||.+||..+   ++|+||+|+||+++.++.++|+|||.+........  
T Consensus        81 ~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--  153 (253)
T cd05122          81 GGSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLHSNG---IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA--  153 (253)
T ss_pred             CCcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhcCC---EecCCCCHHHEEEccCCeEEEeecccccccccccc--
Confidence            999999885432  46889999999999999999999987   99999999999999999999999999987654321  


Q ss_pred             cccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchh
Q 003786          635 KTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEA  714 (795)
Q Consensus       635 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~  714 (795)
                       .....++..|+|||.+....++.++|+||||+++++|++|+.|+...+.......  .    ..........       
T Consensus       154 -~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~--~----~~~~~~~~~~-------  219 (253)
T cd05122         154 -RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFK--I----ATNGPPGLRN-------  219 (253)
T ss_pred             -ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHH--H----HhcCCCCcCc-------
Confidence             2345788999999999888899999999999999999999999865432111110  0    0000001110       


Q ss_pred             hHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          715 SYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       715 ~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .......+.+++.+||+.+|++|||+.|++++
T Consensus       220 ~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~  251 (253)
T cd05122         220 PEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH  251 (253)
T ss_pred             ccccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            11124568899999999999999999999874

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.8e-34  Score=312.24  Aligned_cols=249  Identities=22%  Similarity=0.337  Sum_probs=207.8

Q ss_pred             HccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccc--hHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQG--QEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      ....|.+.+.||+|.|++|.++++. ++.+||||++.+.....  .+.+.+|+++|+.++|||||+++.+......+|+|
T Consensus        54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV  133 (596)
T KOG0586|consen   54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV  133 (596)
T ss_pred             cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence            4567999999999999999999864 59999999998764333  35688999999999999999999999999999999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      |||+.+|.+.+++..+.   .+.+..+..++.|+..|++|||+++   |||||||++||||+.+.++||+|||++..+..
T Consensus       134 ~eya~~ge~~~yl~~~g---r~~e~~ar~~F~q~vsaveYcH~k~---ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~  207 (596)
T KOG0586|consen  134 MEYASGGELFDYLVKHG---RMKEKEARAKFRQIVSAVEYCHSKN---IVHRDLKAENILLDENMNIKIADFGFSTFFDY  207 (596)
T ss_pred             EEeccCchhHHHHHhcc---cchhhhhhhhhHHHHHHHHHHhhcc---eeccccchhhcccccccceeeeccccceeecc
Confidence            99999999999995443   4566889999999999999999998   99999999999999999999999999998764


Q ss_pred             CcccccccccccccccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCc
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQGLF-SIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP  708 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~~~~-~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~  708 (795)
                      ..   ...+.+|++.|.|||++.+..| .+.+|+||+|++||.|+.|..||++..-....--              .+..
T Consensus       208 ~~---~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~r--------------vl~g  270 (596)
T KOG0586|consen  208 GL---MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPR--------------VLRG  270 (596)
T ss_pred             cc---cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccch--------------heee
Confidence            33   3456899999999999998766 6899999999999999999999986542222100              0000


Q ss_pred             cccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          709 TLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       709 ~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .  -.++.....++-++++++|-.+|.+|++++++.++
T Consensus       271 k--~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~  306 (596)
T KOG0586|consen  271 K--YRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKD  306 (596)
T ss_pred             e--ecccceeechhHHHHHHhhccCccccCCHHHhhhh
Confidence            0  11222334567789999999999999999999875

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=100.00  E-value=7.2e-34  Score=301.57  Aligned_cols=247  Identities=25%  Similarity=0.363  Sum_probs=199.6

Q ss_pred             CCccccccCcCCcccEEEeEec-CcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecC
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYM  553 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  553 (795)
                      -|++.+.||+|+||.||+|... +++.+|||++.... ......+.+|+.++++++||||+++++++..+...++||||+
T Consensus         5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06641           5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL   84 (277)
T ss_pred             hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence            3677889999999999999754 68899999886432 233467889999999999999999999999999999999999


Q ss_pred             CCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccc
Q 003786          554 PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ  633 (795)
Q Consensus       554 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~  633 (795)
                      ++++|..++..    ..+++..+..++.|++.++.|||+.+   ++|+||+|+||+++.++.++|+|||++........ 
T Consensus        85 ~~~~l~~~i~~----~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~-  156 (277)
T cd06641          85 GGGSALDLLEP----GPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI-  156 (277)
T ss_pred             CCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHccCC---eecCCCCHHhEEECCCCCEEEeecccceecccchh-
Confidence            99999988842    34789999999999999999999987   99999999999999999999999999876543221 


Q ss_pred             ccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccch
Q 003786          634 SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNE  713 (795)
Q Consensus       634 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~  713 (795)
                       ......++..|+|||.+.+..++.++|+|||||++|+|++|..|+........  ..   .. ....         ...
T Consensus       157 -~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~--~~---~~-~~~~---------~~~  220 (277)
T cd06641         157 -KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKV--LF---LI-PKNN---------PPT  220 (277)
T ss_pred             -hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHH--HH---HH-hcCC---------CCC
Confidence             12235688899999999888899999999999999999999999864322111  10   00 0000         011


Q ss_pred             hhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          714 ASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       714 ~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .....+..+.+++.+||+.+|++||++.+++++
T Consensus       221 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~  253 (277)
T cd06641         221 LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH  253 (277)
T ss_pred             CCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            112234567789999999999999999999996

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=100.00  E-value=1.1e-33  Score=302.55  Aligned_cols=264  Identities=23%  Similarity=0.299  Sum_probs=198.3

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccCc--cchHHHHHHHHHHHhcCCcccceeeeeeeec--ceeeEE
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG--QGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL--EEKILI  549 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv  549 (795)
                      ++|++.+.||+|+||.||+|+.. +++.+|+|.+.....  .....+.+|+.++++++||||+++++++...  ...++|
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv   84 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV   84 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence            57899999999999999999875 588999999864322  2234567899999999999999999998877  889999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      |||+++ +|..++....  ..+++..+..++.||++||+|||+.+   |+|+||||+||+++.++.+||+|||++.....
T Consensus        85 ~e~~~~-~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~  158 (293)
T cd07843          85 MEYVEH-DLKSLMETMK--QPFLQSEVKCLMLQLLSGVAHLHDNW---ILHRDLKTSNLLLNNRGILKICDFGLAREYGS  158 (293)
T ss_pred             ehhcCc-CHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence            999985 8877774322  35889999999999999999999988   99999999999999999999999999987654


Q ss_pred             CcccccccccccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchh-HhHh--------HhhhccC
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQG-LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLT-LLGH--------AWDLWKD  699 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~-~~~~--------~~~~~~~  699 (795)
                      ..  .......+++.|+|||.+.+. .++.++|+||||+++++|++|..|+......... ....        .|..+..
T Consensus       159 ~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (293)
T cd07843         159 PL--KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSE  236 (293)
T ss_pred             Cc--cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhc
Confidence            32  112234578899999988654 5789999999999999999999998754422110 0000        0000000


Q ss_pred             cc------cccccCccccchhhHH-HHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          700 DR------AWELIDPTLQNEASYL-ILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       700 ~~------~~~~id~~l~~~~~~~-~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      -.      ........+....+.. ....+.+++.+||+.+|++|||+.|++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~  290 (293)
T cd07843         237 LPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH  290 (293)
T ss_pred             cchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence            00      0000000111111111 35567899999999999999999999874

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-34  Score=328.41  Aligned_cols=278  Identities=23%  Similarity=0.248  Sum_probs=218.9

Q ss_pred             HHhHHHHccCCccccccCcCCcccEEEeEec-CcceEEEEEecc---cCccchHHHHHHHHHHHhcCCcccceeeeeeee
Q 003786          467 LASVSAATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSS---QSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIE  542 (795)
Q Consensus       467 ~~~i~~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~  542 (795)
                      ...+....++|++++.||+|+||.|.+++++ +++.||+|++.+   ........|..|-.+|..-+.+=|+.++..|++
T Consensus        67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD  146 (1317)
T KOG0612|consen   67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD  146 (1317)
T ss_pred             HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence            4445556789999999999999999999875 588999999987   233455678999999999999999999999999


Q ss_pred             cceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccc
Q 003786          543 LEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFG  622 (795)
Q Consensus       543 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFG  622 (795)
                      ..++|+|||||+||+|-.++.   +...+++..+..++..|..||..||+.|   +|||||||+|||||..|++||+|||
T Consensus       147 ~~~LYlVMdY~pGGDlltLlS---k~~~~pE~~ArFY~aEiVlAldslH~mg---yVHRDiKPDNvLld~~GHikLADFG  220 (1317)
T KOG0612|consen  147 ERYLYLVMDYMPGGDLLTLLS---KFDRLPEDWARFYTAEIVLALDSLHSMG---YVHRDIKPDNVLLDKSGHIKLADFG  220 (1317)
T ss_pred             ccceEEEEecccCchHHHHHh---hcCCChHHHHHHHHHHHHHHHHHHHhcc---ceeccCCcceeEecccCcEeeccch
Confidence            999999999999999999883   3346999999999999999999999998   9999999999999999999999999


Q ss_pred             cccccCCCccccccccccccccccccccccc-----CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhc
Q 003786          623 MARIFGGDELQSKTKRIVGTYGYMSPEYAQQ-----GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLW  697 (795)
Q Consensus       623 la~~~~~~~~~~~~~~~~gt~~y~APE~~~~-----~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~  697 (795)
                      .+-.+..+.. ......+|||-|.+||++..     +.|+..+|+||+||++|||+.|..||-..     .++.....+.
T Consensus       221 sClkm~~dG~-V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYad-----slveTY~KIm  294 (1317)
T KOG0612|consen  221 SCLKMDADGT-VRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYAD-----SLVETYGKIM  294 (1317)
T ss_pred             hHHhcCCCCc-EEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHH-----HHHHHHHHHh
Confidence            9987765443 33455789999999999853     57999999999999999999999998432     2222222222


Q ss_pred             cCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCC---HHHHHHHHccccC------CCCCCCCCCccc
Q 003786          698 KDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPT---MFEVVSMLTNKTI------NLPHPRQPAFSS  764 (795)
Q Consensus       698 ~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt---~~evl~~L~~~~~------~l~~p~~p~~~~  764 (795)
                      .......+-       ...+++....+||...|. +|+.|..   +.++..|.=+...      ..++|.+|.+.+
T Consensus       295 ~hk~~l~FP-------~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~~W~~iR~~~pP~vPevss  362 (1317)
T KOG0612|consen  295 NHKESLSFP-------DETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGIDWDNIRESVPPVVPEVSS  362 (1317)
T ss_pred             chhhhcCCC-------cccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCCChhhhhhcCCCCCCcCCC
Confidence            111111111       112245566778887665 7888887   9999987533222      256677777655

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=100.00  E-value=1.6e-33  Score=300.31  Aligned_cols=249  Identities=24%  Similarity=0.349  Sum_probs=199.9

Q ss_pred             CCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCC
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMP  554 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~  554 (795)
                      .|...++||+|++|.||++... +++.+++|++........+.+.+|+.+++.++||||+++++++...+..++|+||++
T Consensus        20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~   99 (285)
T cd06648          20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLE   99 (285)
T ss_pred             hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccC
Confidence            3455678999999999999864 588999999865544555678899999999999999999999999999999999999


Q ss_pred             CCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcccc
Q 003786          555 NKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQS  634 (795)
Q Consensus       555 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~  634 (795)
                      +++|.+++..    ..+++..+..++.|++.||+|||+.+   |+||||+|+||+++.++.++|+|||++........  
T Consensus       100 ~~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~--  170 (285)
T cd06648         100 GGALTDIVTH----TRMNEEQIATVCLAVLKALSFLHAQG---VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP--  170 (285)
T ss_pred             CCCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChhhEEEcCCCcEEEcccccchhhccCCc--
Confidence            9999998844    34788899999999999999999988   99999999999999999999999999876543221  


Q ss_pred             cccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchh
Q 003786          635 KTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEA  714 (795)
Q Consensus       635 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~  714 (795)
                      ......|++.|+|||.+.+..++.++|||||||++|||++|..|+......  ......    .....     +.+.  .
T Consensus       171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~--~~~~~~----~~~~~-----~~~~--~  237 (285)
T cd06648         171 RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPL--QAMKRI----RDNLP-----PKLK--N  237 (285)
T ss_pred             ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHH--HHHHHH----HhcCC-----CCCc--c
Confidence            122356899999999998888999999999999999999999998543211  111110    00100     0110  0


Q ss_pred             hHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          715 SYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       715 ~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .......+.+++.+||+.+|++||++.+++++
T Consensus       238 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~  269 (285)
T cd06648         238 LHKVSPRLRSFLDRMLVRDPAQRATAAELLNH  269 (285)
T ss_pred             cccCCHHHHHHHHHHcccChhhCcCHHHHccC
Confidence            11134578899999999999999999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-33  Score=298.81  Aligned_cols=248  Identities=24%  Similarity=0.421  Sum_probs=199.1

Q ss_pred             CCccccccCcCCcccEEEeEe-cCcceEEEEEecccC-ccchHHHHHHHHHHHhcC---CcccceeeeeeeecceeeEEe
Q 003786          476 NFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQ---HRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~  550 (795)
                      .|+..+.||+|+||.||+|.. .+++.+|+|.+.... ....+++.+|+.++++++   |||++++++++......++||
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~   81 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM   81 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence            477889999999999999986 468899999986542 334567889999999997   999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      ||+++++|.+++..    ..+++..+..++.|++.||.|||+.+   |+|+||+|+||+++.++.++|+|||++......
T Consensus        82 e~~~~~~L~~~~~~----~~l~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~  154 (277)
T cd06917          82 EYAEGGSVRTLMKA----GPIAEKYISVIIREVLVALKYIHKVG---VIHRDIKAANILVTNTGNVKLCDFGVAALLNQN  154 (277)
T ss_pred             ecCCCCcHHHHHHc----cCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHHEEEcCCCCEEEccCCceeecCCC
Confidence            99999999988743    25889999999999999999999988   999999999999999999999999999876543


Q ss_pred             ccccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcc
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT  709 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~  709 (795)
                      .  .......|+..|+|||.+.+ ..++.++|+|||||++|+|++|..|+..........      ......     .+.
T Consensus       155 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~------~~~~~~-----~~~  221 (277)
T cd06917         155 S--SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMM------LIPKSK-----PPR  221 (277)
T ss_pred             c--cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhh------ccccCC-----CCC
Confidence            3  12233568899999998865 457899999999999999999999986533211100      000000     011


Q ss_pred             ccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          710 LQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       710 l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      +...   .....+.+++.+||+.+|++||++.+++++
T Consensus       222 ~~~~---~~~~~~~~~i~~~l~~~p~~R~~~~~il~~  255 (277)
T cd06917         222 LEDN---GYSKLLREFVAACLDEEPKERLSAEELLKS  255 (277)
T ss_pred             CCcc---cCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence            1110   134567889999999999999999999874

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=100.00  E-value=2.4e-33  Score=299.04  Aligned_cols=254  Identities=27%  Similarity=0.366  Sum_probs=205.3

Q ss_pred             HccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      ..+.|+..+.||+|++|.||+|.+. +++.+++|++..... ..+.+.+|++++++++|+||+++++.+...+..++|+|
T Consensus        17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   95 (286)
T cd06614          17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME   95 (286)
T ss_pred             ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence            4567889999999999999999876 588999999975543 56778999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      |+++++|.+++....  ..+++..+..++.|++.||.|||+.+   |+|+||+|+||+++.++.++|+|||++.......
T Consensus        96 ~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~~g---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~  170 (286)
T cd06614          96 YMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHSQN---VIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK  170 (286)
T ss_pred             ccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCChhhEEEcCCCCEEECccchhhhhccch
Confidence            999999999985432  36889999999999999999999987   9999999999999999999999999987654322


Q ss_pred             ccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcccc
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQ  711 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~  711 (795)
                      .  ......++..|+|||.+.+..++.++|+|||||++|+|++|..|+........  ....    .......     . 
T Consensus       171 ~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~--~~~~----~~~~~~~-----~-  236 (286)
T cd06614         171 S--KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRA--LFLI----TTKGIPP-----L-  236 (286)
T ss_pred             h--hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHH--HHHH----HhcCCCC-----C-
Confidence            1  22334578899999999888899999999999999999999999864322111  1000    0000000     0 


Q ss_pred             chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          712 NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       712 ~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                       .........+.+++.+||+.+|.+||++.+|+++.
T Consensus       237 -~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~  271 (286)
T cd06614         237 -KNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHP  271 (286)
T ss_pred             -cchhhCCHHHHHHHHHHhccChhhCcCHHHHhhCh
Confidence             01112345678999999999999999999999753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=100.00  E-value=1.8e-33  Score=309.39  Aligned_cols=262  Identities=22%  Similarity=0.252  Sum_probs=197.2

Q ss_pred             HccCCccccccCcCCcccEEEeEec-CcceEEEEEeccc--CccchHHHHHHHHHHHhcCCcccceeeeeeeec------
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQ--SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL------  543 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------  543 (795)
                      ..++|++.+.||+|+||.||+|+.. +++.||||++.+.  ......++.+|+.++++++||||+++++++...      
T Consensus        14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   93 (353)
T cd07850          14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF   93 (353)
T ss_pred             hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence            4578999999999999999999864 6899999998643  223345677899999999999999999987643      


Q ss_pred             ceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccc
Q 003786          544 EEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGM  623 (795)
Q Consensus       544 ~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGl  623 (795)
                      ...++||||+.+ +|...+..     .+++..+..++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||+
T Consensus        94 ~~~~lv~e~~~~-~l~~~~~~-----~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nil~~~~~~~kL~Dfg~  164 (353)
T cd07850          94 QDVYLVMELMDA-NLCQVIQM-----DLDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL  164 (353)
T ss_pred             CcEEEEEeccCC-CHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCcc
Confidence            356999999975 67666632     1788889999999999999999988   99999999999999999999999999


Q ss_pred             ccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcch-hHh------------
Q 003786          624 ARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSL-TLL------------  690 (795)
Q Consensus       624 a~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~-~~~------------  690 (795)
                      ++......   ......+++.|+|||.+.+..++.++|||||||++|+|++|+.||...+.... ..+            
T Consensus       165 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  241 (353)
T cd07850         165 ARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFM  241 (353)
T ss_pred             ceeCCCCC---CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence            98654322   12334678999999999999999999999999999999999999865432110 000            


Q ss_pred             Hh---HhhhccCc-------ccccccCccc----cchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          691 GH---AWDLWKDD-------RAWELIDPTL----QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       691 ~~---~~~~~~~~-------~~~~~id~~l----~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ..   ....+...       ...+++...+    ...........+.+++.+||+.||++|||+.|++++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~  311 (353)
T cd07850         242 SRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH  311 (353)
T ss_pred             HHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            00   00000000       0001111100    011122345567899999999999999999999986

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=3e-34  Score=329.05  Aligned_cols=256  Identities=28%  Similarity=0.369  Sum_probs=191.6

Q ss_pred             HHHccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeec-----
Q 003786          471 SAATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL-----  543 (795)
Q Consensus       471 ~~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----  543 (795)
                      +....+|+..+.||+||||.||+++.+ +|+.||||+|.... ......+.+|+..|.+|+|||||++|..+.+.     
T Consensus       475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~  554 (1351)
T KOG1035|consen  475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT  554 (1351)
T ss_pred             hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence            456678999999999999999999865 79999999996553 33446788999999999999999998632110     


Q ss_pred             --------------------------------------------------------------------------------
Q 003786          544 --------------------------------------------------------------------------------  543 (795)
Q Consensus       544 --------------------------------------------------------------------------------  543 (795)
                                                                                                      
T Consensus       555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS  634 (1351)
T KOG1035|consen  555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS  634 (1351)
T ss_pred             cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence                                                                                            


Q ss_pred             ----------------------------------ceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHH
Q 003786          544 ----------------------------------EEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLY  589 (795)
Q Consensus       544 ----------------------------------~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~  589 (795)
                                                        ..+|+=||||+..+|.+++.++....  ....+++++++|+.||+|
T Consensus       635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~--~~d~~wrLFreIlEGLaY  712 (1351)
T KOG1035|consen  635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS--QRDEAWRLFREILEGLAY  712 (1351)
T ss_pred             ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch--hhHHHHHHHHHHHHHHHH
Confidence                                              01367789999988888885443221  356889999999999999


Q ss_pred             HHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccC----C------------Cccccccccccccccccccccccc
Q 003786          590 LHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG----G------------DELQSKTKRIVGTYGYMSPEYAQQ  653 (795)
Q Consensus       590 LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~----~------------~~~~~~~~~~~gt~~y~APE~~~~  653 (795)
                      +|+++   ||||||||.||+|+++..|||+|||+|....    .            .......+..+||.-|+|||++.+
T Consensus       713 IH~~g---iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~  789 (1351)
T KOG1035|consen  713 IHDQG---IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSD  789 (1351)
T ss_pred             HHhCc---eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcc
Confidence            99998   9999999999999999999999999998721    0            011112345789999999999876


Q ss_pred             C---CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhc
Q 003786          654 G---LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCV  730 (795)
Q Consensus       654 ~---~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL  730 (795)
                      .   .|+.|+|+|||||||+||+.   ||....+....+-     ..+.+.+...  +.    ........-.++|.+|+
T Consensus       790 ~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~-----~LR~g~iP~~--~~----f~~~~~~~e~slI~~Ll  855 (1351)
T KOG1035|consen  790 TSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILT-----NLRKGSIPEP--AD----FFDPEHPEEASLIRWLL  855 (1351)
T ss_pred             cccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHH-----hcccCCCCCC--cc----cccccchHHHHHHHHHh
Confidence            4   59999999999999999984   4544332222111     1122222221  11    11122233457999999


Q ss_pred             cCCCCCCCCHHHHHH
Q 003786          731 QEDAADRPTMFEVVS  745 (795)
Q Consensus       731 ~~dP~~RPt~~evl~  745 (795)
                      +.||.+|||+.|+|.
T Consensus       856 ~hdP~kRPtA~eLL~  870 (1351)
T KOG1035|consen  856 SHDPSKRPTATELLN  870 (1351)
T ss_pred             cCCCccCCCHHHHhh
Confidence            999999999999987

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=100.00  E-value=2e-33  Score=298.60  Aligned_cols=258  Identities=21%  Similarity=0.263  Sum_probs=193.3

Q ss_pred             CccccccCcCCcccEEEeEec-CcceEEEEEecccC-ccchHHHHHHHHHHHhcC-Ccccceeeeeeeec--ceeeEEee
Q 003786          477 FSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQ-HRNLVRLLGCCIEL--EEKILIYE  551 (795)
Q Consensus       477 ~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~--~~~~lv~E  551 (795)
                      |++.++||+|+||.||+|+.. +++.||+|++.... ........+|+.++.++. ||||+++++++.+.  +..++|+|
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e   80 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE   80 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence            677889999999999999864 58899999986542 222334557899999885 99999999999987  88999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      |+++ +|.+.+...  ...+++..+..++.||++||.|||+.+   ++||||||+||+++. +.+||+|||++.......
T Consensus        81 ~~~~-~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~  153 (282)
T cd07831          81 LMDM-NLYELIKGR--KRPLPEKRVKSYMYQLLKSLDHMHRNG---IFHRDIKPENILIKD-DILKLADFGSCRGIYSKP  153 (282)
T ss_pred             cCCc-cHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEcC-CCeEEEecccccccccCC
Confidence            9975 666666332  246889999999999999999999988   999999999999999 999999999998654322


Q ss_pred             ccccccccccccccccccccc-cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhc-----------cC
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQ-QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLW-----------KD  699 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~-~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~-----------~~  699 (795)
                      .   .....++..|+|||.+. +..++.++|||||||++|||++|..||...+....  ........           ..
T Consensus       154 ~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  228 (282)
T cd07831         154 P---YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQ--IAKIHDVLGTPDAEVLKKFRK  228 (282)
T ss_pred             C---cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHH--HHHHHHHcCCCCHHHHHhhcc
Confidence            1   12345789999999764 45678999999999999999999999976442211  11100000           00


Q ss_pred             cccccccCcccc----chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          700 DRAWELIDPTLQ----NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       700 ~~~~~~id~~l~----~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ........+...    .......+..+.+++.+||+.+|++||++++++++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~  279 (282)
T cd07831         229 SRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH  279 (282)
T ss_pred             cccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence            000000000000    11122346788999999999999999999999874

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-33  Score=299.69  Aligned_cols=262  Identities=24%  Similarity=0.313  Sum_probs=196.7

Q ss_pred             CccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecC
Q 003786          477 FSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYM  553 (795)
Q Consensus       477 ~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  553 (795)
                      |++.+.||.|++|.||+|... +|+.||+|++....  ....+.+.+|++++++++|||++++++++.+.+..+++|||+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~   80 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL   80 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence            677889999999999999864 68999999986543  223457889999999999999999999999999999999999


Q ss_pred             CCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccc
Q 003786          554 PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ  633 (795)
Q Consensus       554 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~  633 (795)
                      + ++|..++.... ...+++..+..++.|+++||.|||+.+   ++||||+|+||+++.++.++|+|||++.......  
T Consensus        81 ~-~~l~~~~~~~~-~~~~~~~~~~~~~~~i~~~L~~lH~~~---~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~--  153 (283)
T cd07835          81 D-LDLKKYMDSSP-LTGLDPPLIKSYLYQLLQGIAYCHSHR---VLHRDLKPQNLLIDREGALKLADFGLARAFGVPV--  153 (283)
T ss_pred             C-cCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCcEEEeecccccccCCCc--
Confidence            5 68888874332 235889999999999999999999987   9999999999999999999999999997653221  


Q ss_pred             ccccccccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhc-cCcc-------ccc
Q 003786          634 SKTKRIVGTYGYMSPEYAQQG-LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLW-KDDR-------AWE  704 (795)
Q Consensus       634 ~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~-~~~~-------~~~  704 (795)
                      .......+++.|+|||++.+. .++.++||||||+++|+|++|..||......... ........ ....       ..+
T Consensus       154 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  232 (283)
T cd07835         154 RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQL-FRIFRTLGTPDEDVWPGVTSLPD  232 (283)
T ss_pred             cccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHHHhCCCChHHhhhhhhchh
Confidence            111223568899999987654 5789999999999999999999998654321110 00000000 0000       000


Q ss_pred             c---c---CccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          705 L---I---DPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       705 ~---i---d~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .   .   ...............+.+++.+||+.+|++|||++|++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~  280 (283)
T cd07835         233 YKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH  280 (283)
T ss_pred             hhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence            0   0   0000011122234578899999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=100.00  E-value=2.2e-33  Score=298.33  Aligned_cols=243  Identities=26%  Similarity=0.300  Sum_probs=188.3

Q ss_pred             ccCcCCcccEEEeEec-CcceEEEEEecccCc---cchHHHHHHHHHHHh---cCCcccceeeeeeeecceeeEEeecCC
Q 003786          482 KLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG---QGQEEFKNEIKLIAK---LQHRNLVRLLGCCIELEEKILIYEYMP  554 (795)
Q Consensus       482 ~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~---l~h~niv~l~~~~~~~~~~~lv~E~~~  554 (795)
                      .||+|+||.||++... +++.+|+|.+.+...   .....+.+|..+++.   .+||||+.+++.+...+..++||||++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            4899999999999864 588999998865422   112334455444433   479999999999999999999999999


Q ss_pred             CCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcccc
Q 003786          555 NKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQS  634 (795)
Q Consensus       555 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~  634 (795)
                      +++|..++..   .+.+++..+..++.|++.||.|||+.+   |+||||||+||++++++.+||+|||++.......   
T Consensus        81 ~~~L~~~i~~---~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~---  151 (279)
T cd05633          81 GGDLHYHLSQ---HGVFSEKEMRFYATEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---  151 (279)
T ss_pred             CCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cCCCCCCHHHEEECCCCCEEEccCCcceeccccC---
Confidence            9999988843   345899999999999999999999998   9999999999999999999999999987553221   


Q ss_pred             cccccccccccccccccc-cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccch
Q 003786          635 KTKRIVGTYGYMSPEYAQ-QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNE  713 (795)
Q Consensus       635 ~~~~~~gt~~y~APE~~~-~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~  713 (795)
                       .....|++.|+|||.+. +..++.++||||+||++|+|++|..||...............   .          .....
T Consensus       152 -~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~---~----------~~~~~  217 (279)
T cd05633         152 -PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT---L----------TVNVE  217 (279)
T ss_pred             -ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHh---h----------cCCcC
Confidence             12346899999999886 456899999999999999999999998654322221111100   0          00111


Q ss_pred             hhHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHHH
Q 003786          714 ASYLILNRYINVGLLCVQEDAADRP-----TMFEVVSML  747 (795)
Q Consensus       714 ~~~~~~~~l~~li~~cL~~dP~~RP-----t~~evl~~L  747 (795)
                      .+.....++.+++.+||+.||++||     +++|+++|.
T Consensus       218 ~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~  256 (279)
T cd05633         218 LPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHV  256 (279)
T ss_pred             CccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCc
Confidence            2233456788999999999999999     699999863

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=100.00  E-value=1.4e-33  Score=295.41  Aligned_cols=250  Identities=24%  Similarity=0.358  Sum_probs=200.2

Q ss_pred             CCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      +|++.+.||+|+||.||+|... +++.+|+|.+....  ....+.+.+|++++++++|+||+++++.+.+....++|+||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   80 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY   80 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence            5788899999999999999865 48899999986532  23456788999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCC-eeeeccccccccCCCc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMN-PKISDFGMARIFGGDE  631 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~-vkL~DFGla~~~~~~~  631 (795)
                      +++++|.+++.... ...+++..+..++.|+++||.|||+.+   ++|+||||+||++++++. +||+|||.+.......
T Consensus        81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~  156 (257)
T cd08225          81 CDGGDLMKRINRQR-GVLFSEDQILSWFVQISLGLKHIHDRK---ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM  156 (257)
T ss_pred             CCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEcCCCCeEEecccccchhccCCc
Confidence            99999999885432 234788999999999999999999987   999999999999998864 6999999998664322


Q ss_pred             ccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcccc
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQ  711 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~  711 (795)
                      .  ......|++.|+|||++.+..++.++|+|||||+++||++|..|+........  .   .... .....        
T Consensus       157 ~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~---~~~~-~~~~~--------  220 (257)
T cd08225         157 E--LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQL--V---LKIC-QGYFA--------  220 (257)
T ss_pred             c--cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHH--H---HHHh-cccCC--------
Confidence            1  12234689999999999888899999999999999999999999864332111  1   1111 11110        


Q ss_pred             chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          712 NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       712 ~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                       .........+.+++.+|++.+|++|||+.|++++
T Consensus       221 -~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~  254 (257)
T cd08225         221 -PISPNFSRDLRSLISQLFKVSPRDRPSITSILKR  254 (257)
T ss_pred             -CCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence             1111234568899999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=4.4e-35  Score=337.23  Aligned_cols=258  Identities=26%  Similarity=0.339  Sum_probs=207.1

Q ss_pred             HHHHccCCccccccCcCCcccEEEeEe-cCcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeeccee
Q 003786          470 VSAATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEK  546 (795)
Q Consensus       470 i~~~~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  546 (795)
                      ++..+-+++-..+||.|.||.||.+.. .+|.-.|+|-+....  ......+.+|..+|..++|||+|++||+-.+.+..
T Consensus      1230 lsnV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv 1309 (1509)
T KOG4645|consen 1230 LSNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKV 1309 (1509)
T ss_pred             hccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHH
Confidence            344567889999999999999999975 458889999775443  33446788999999999999999999999999999


Q ss_pred             eEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          547 ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                      ++.||||.+|+|.+.+..   ....++.....+..|++.|++|||++|   ||||||||+||+|+.+|.+|++|||.|..
T Consensus      1310 ~IFMEyC~~GsLa~ll~~---gri~dE~vt~vyt~qll~gla~LH~~g---IVHRDIK~aNI~Ld~~g~iK~~DFGsa~k 1383 (1509)
T KOG4645|consen 1310 YIFMEYCEGGSLASLLEH---GRIEDEMVTRVYTKQLLEGLAYLHEHG---IVHRDIKPANILLDFNGLIKYGDFGSAVK 1383 (1509)
T ss_pred             HHHHHHhccCcHHHHHHh---cchhhhhHHHHHHHHHHHHHHHHHhcC---ceecCCCccceeeecCCcEEeecccceeE
Confidence            999999999999999843   233566667778899999999999999   99999999999999999999999999998


Q ss_pred             cCCCc--ccccccccccccccccccccccC---CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcc
Q 003786          627 FGGDE--LQSKTKRIVGTYGYMSPEYAQQG---LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDR  701 (795)
Q Consensus       627 ~~~~~--~~~~~~~~~gt~~y~APE~~~~~---~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~  701 (795)
                      +.+..  .........||+.|||||++.+.   ...-++|||||||++.||+||++||...+. ...+..++..    + 
T Consensus      1384 i~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn-e~aIMy~V~~----g- 1457 (1509)
T KOG4645|consen 1384 IKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN-EWAIMYHVAA----G- 1457 (1509)
T ss_pred             ecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc-hhHHHhHHhc----c-
Confidence            76542  22334567899999999999653   467789999999999999999999964331 1111111100    0 


Q ss_pred             cccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          702 AWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       702 ~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                              -..+++.....+-.+++..||+.||++|-++.|++++-
T Consensus      1458 --------h~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~ 1495 (1509)
T KOG4645|consen 1458 --------HKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHA 1495 (1509)
T ss_pred             --------CCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhh
Confidence                    12234444666777899999999999999999999874

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=100.00  E-value=1.2e-33  Score=308.71  Aligned_cols=263  Identities=23%  Similarity=0.283  Sum_probs=195.7

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeec-----cee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL-----EEK  546 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~  546 (795)
                      +++|++.++||+|+||.||+|+.. +++.||||++.... ......+.+|+.++++++||||+++++++...     ...
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   83 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV   83 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence            468999999999999999999854 68999999986432 23345678899999999999999999886644     357


Q ss_pred             eEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          547 ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                      ++|+||+.+ +|..++.    ...+++..+..++.|+++||.|||+.+   |+||||||+||+++.++.+||+|||++..
T Consensus        84 ~lv~e~~~~-~l~~~~~----~~~l~~~~~~~i~~ql~~aL~~LH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~  155 (336)
T cd07849          84 YIVQELMET-DLYKLIK----TQHLSNDHIQYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTNCDLKICDFGLARI  155 (336)
T ss_pred             EEEehhccc-CHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEECcccceee
Confidence            899999975 6666652    235889999999999999999999988   99999999999999999999999999986


Q ss_pred             cCCCccc-cccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCc---c
Q 003786          627 FGGDELQ-SKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDD---R  701 (795)
Q Consensus       627 ~~~~~~~-~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~---~  701 (795)
                      ....... .......|++.|+|||.+.+ ..++.++|||||||++|+|++|+.||...+....  ...........   .
T Consensus       156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~--~~~~~~~~~~~~~~~  233 (336)
T cd07849         156 ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQ--LNLILGVLGTPSQED  233 (336)
T ss_pred             ccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHcCCCCHHH
Confidence            5432211 11223568999999998654 5789999999999999999999999865432111  00000000000   0


Q ss_pred             cccccCc-----------ccc---chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          702 AWELIDP-----------TLQ---NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       702 ~~~~id~-----------~l~---~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ...+.+.           ...   ..........+.+++.+||+.+|++|||+.|++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h  292 (336)
T cd07849         234 LNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH  292 (336)
T ss_pred             HHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            0000000           000   00111234568899999999999999999999997

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=100.00  E-value=2.2e-33  Score=302.51  Aligned_cols=247  Identities=30%  Similarity=0.419  Sum_probs=195.3

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccCc---cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG---QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      ..|+..+.||+|+||.||+|+.. +++.||+|++.....   .....+.+|+++++.++||||+++++++.+.+..++|+
T Consensus        15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~   94 (307)
T cd06607          15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM   94 (307)
T ss_pred             hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence            56888999999999999999865 588999999864332   22356889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      ||+++ ++.+++...  ...+++..+..++.|++.||.|||+.+   |+||||+|+||+++.++.+||+|||++......
T Consensus        95 e~~~g-~l~~~~~~~--~~~l~~~~~~~~~~ql~~~L~~LH~~~---i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~  168 (307)
T cd06607          95 EYCLG-SASDILEVH--KKPLQEVEIAAICHGALQGLAYLHSHE---RIHRDIKAGNILLTEPGTVKLADFGSASLVSPA  168 (307)
T ss_pred             HhhCC-CHHHHHHHc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEECCCCCEEEeecCcceecCCC
Confidence            99985 555555322  235889999999999999999999988   999999999999999999999999998764322


Q ss_pred             cccccccccccccccccccccc---cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccC
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQ---QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID  707 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~---~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id  707 (795)
                            ....+++.|+|||.+.   ...++.++||||||+++|||++|..|+..........     ..... ..     
T Consensus       169 ------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~-----~~~~~-~~-----  231 (307)
T cd06607         169 ------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY-----HIAQN-DS-----  231 (307)
T ss_pred             ------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHH-----HHhcC-CC-----
Confidence                  2346788999999874   4568899999999999999999999986433211110     00000 00     


Q ss_pred             ccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          708 PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       708 ~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                      +.+   ........+.+++.+||+.+|++||++.+|+++.
T Consensus       232 ~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~  268 (307)
T cd06607         232 PTL---SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHR  268 (307)
T ss_pred             CCC---CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence            011   1112445688999999999999999999999864

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>PHA03210 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=7.6e-34  Score=325.29  Aligned_cols=269  Identities=22%  Similarity=0.287  Sum_probs=187.0

Q ss_pred             HccCCccccccCcCCcccEEEeEecC--cceEEEEE--------------ecc---cCccchHHHHHHHHHHHhcCCccc
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLLN--GQEVAVKR--------------LSS---QSGQGQEEFKNEIKLIAKLQHRNL  533 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~~--~~~vavK~--------------~~~---~~~~~~~~~~~E~~~l~~l~h~ni  533 (795)
                      ..++|+++++||+|+||.||++....  +...++|.              +.+   ........+.+|+++|++++||||
T Consensus       146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI  225 (501)
T PHA03210        146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI  225 (501)
T ss_pred             hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence            35789999999999999999986532  22222221              111   111234568899999999999999


Q ss_pred             ceeeeeeeecceeeEEeecCCCCChhhhhhccCC--cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEEC
Q 003786          534 VRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTK--ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLD  611 (795)
Q Consensus       534 v~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~  611 (795)
                      |++++++.+.+..++|+|++.+ +|..++.....  ........+..++.||+.||.|||+++   |+||||||+|||++
T Consensus       226 v~l~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g---IiHrDLKP~NILl~  301 (501)
T PHA03210        226 LKIEEILRSEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK---LIHRDIKLENIFLN  301 (501)
T ss_pred             CcEeEEEEECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEC
Confidence            9999999999999999999865 45444432211  122334567789999999999999988   99999999999999


Q ss_pred             CCCCeeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCC-CCCCCcc-hhH
Q 003786          612 KDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNT-DFSNTNS-LTL  689 (795)
Q Consensus       612 ~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~-~~~~~~~-~~~  689 (795)
                      .++.+||+|||+++.+..... .......||+.|+|||++.+..++.++|||||||++|||++|..++ ....... ..+
T Consensus       302 ~~~~vkL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~  380 (501)
T PHA03210        302 CDGKIVLGDFGTAMPFEKERE-AFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQL  380 (501)
T ss_pred             CCCCEEEEeCCCceecCcccc-cccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHH
Confidence            999999999999987643321 1223357999999999999999999999999999999999987543 3222111 111


Q ss_pred             hHhHhhhcc--Cc-------ccccccCcc----ccchhh-----HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          690 LGHAWDLWK--DD-------RAWELIDPT----LQNEAS-----YLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       690 ~~~~~~~~~--~~-------~~~~~id~~----l~~~~~-----~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                      .... ....  ..       ..++.++..    ......     ......+.+++.+||+.||++|||+.|++++-
T Consensus       381 ~~~~-~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp  455 (501)
T PHA03210        381 LKII-DSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALP  455 (501)
T ss_pred             HHHH-HhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhCh
Confidence            1111 0000  00       000111000    000000     01223567789999999999999999999863

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=100.00  E-value=4.3e-33  Score=295.66  Aligned_cols=244  Identities=27%  Similarity=0.352  Sum_probs=193.1

Q ss_pred             cCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCCCCCh
Q 003786          483 LGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSL  558 (795)
Q Consensus       483 LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL  558 (795)
                      ||+|+||.||++... +++.+|+|.+.+..   ....+.+.+|+++|++++||||+++++.+...+..++||||+++++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            799999999999754 58899999986532   22344567899999999999999999999999999999999999999


Q ss_pred             hhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcccccccc
Q 003786          559 DFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKR  638 (795)
Q Consensus       559 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~~~~  638 (795)
                      .+++..... ..+++..+..++.|+++||.|||+.+   ++||||+|+||+++.++.+||+|||++.......   ....
T Consensus        81 ~~~l~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~---~~~~  153 (277)
T cd05577          81 KYHIYNVGE-PGFPEARAIFYAAQIICGLEHLHQRR---IVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK---KIKG  153 (277)
T ss_pred             HHHHHHcCc-CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEccCcchhhhccCC---cccc
Confidence            988854332 35889999999999999999999988   9999999999999999999999999987654321   2223


Q ss_pred             cccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcch-hHhHhHhhhccCcccccccCccccchhhHH
Q 003786          639 IVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSL-TLLGHAWDLWKDDRAWELIDPTLQNEASYL  717 (795)
Q Consensus       639 ~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~id~~l~~~~~~~  717 (795)
                      ..++..|+|||.+.+..++.++|||||||++|+|++|+.||........ ..+..   ....          .....+..
T Consensus       154 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---~~~~----------~~~~~~~~  220 (277)
T cd05577         154 RAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKR---RTLE----------MAVEYPDK  220 (277)
T ss_pred             ccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHh---cccc----------ccccCCcc
Confidence            4678899999999888899999999999999999999999865443111 11100   0000          00111222


Q ss_pred             HHHHHHHHHHhhccCCCCCCC-----CHHHHHHH
Q 003786          718 ILNRYINVGLLCVQEDAADRP-----TMFEVVSM  746 (795)
Q Consensus       718 ~~~~l~~li~~cL~~dP~~RP-----t~~evl~~  746 (795)
                      ....+.+++.+||+.+|++||     ++.+++++
T Consensus       221 ~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h  254 (277)
T cd05577         221 FSPEAKDLCEALLQKDPEKRLGCRGGSADEVREH  254 (277)
T ss_pred             CCHHHHHHHHHHccCChhHccCCCcccHHHHHhC
Confidence            355678999999999999999     77777763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=100.00  E-value=1.4e-33  Score=300.94  Aligned_cols=255  Identities=26%  Similarity=0.383  Sum_probs=195.0

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccC-ccchHHHHHHHHHHHhcC-CcccceeeeeeeecceeeEEee
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQ-HRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      ++|+..+.||+|+||.||+++.. +++.+|+|++.... ......+.+|+.++.++. ||||+++++++..+...+++||
T Consensus         4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e   83 (288)
T cd06616           4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICME   83 (288)
T ss_pred             HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEe
Confidence            35667789999999999999864 58899999986543 234567889999999996 9999999999999999999999


Q ss_pred             cCCCCChhhhhhc--cCCcccCChhhHHHHHHHHHHHHHHHHhc-CCCcEEeccCCCCcEEECCCCCeeeeccccccccC
Q 003786          552 YMPNKSLDFFLFD--STKENLLGWGTRVRIIEGIAQGLLYLHQY-SRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       552 ~~~~gsL~~~l~~--~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      |+.. ++..+...  ......+++..+..++.|+++||+|||+. +   |+||||||+||+++.++.+||+|||++....
T Consensus        84 ~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~  159 (288)
T cd06616          84 LMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK---IIHRDVKPSNILLDRNGNIKLCDFGISGQLV  159 (288)
T ss_pred             cccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCC---eeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence            9875 44433211  11235688999999999999999999975 5   9999999999999999999999999997654


Q ss_pred             CCcccccccccccccccccccccccC---CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccc
Q 003786          629 GDELQSKTKRIVGTYGYMSPEYAQQG---LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWEL  705 (795)
Q Consensus       629 ~~~~~~~~~~~~gt~~y~APE~~~~~---~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  705 (795)
                      ...   ......|++.|+|||.+.+.   .++.++|||||||++|||++|+.||.....    .......... ..    
T Consensus       160 ~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----~~~~~~~~~~-~~----  227 (288)
T cd06616         160 DSI---AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS----VFDQLTQVVK-GD----  227 (288)
T ss_pred             cCC---ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch----HHHHHhhhcC-CC----
Confidence            322   11234688999999998765   689999999999999999999999864331    1111101000 00    


Q ss_pred             cCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          706 IDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       706 id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                       .+.+........+..+.+++.+||+.+|++|||+.+|+++
T Consensus       228 -~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~  267 (288)
T cd06616         228 -PPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH  267 (288)
T ss_pred             -CCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence             1111112223345678899999999999999999999985

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=100.00  E-value=3.6e-33  Score=296.70  Aligned_cols=260  Identities=25%  Similarity=0.333  Sum_probs=200.5

Q ss_pred             CccccccCcCCcccEEEeEec-CcceEEEEEecccCcc--chHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecC
Q 003786          477 FSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQ--GQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYM  553 (795)
Q Consensus       477 ~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  553 (795)
                      |++.+.||+|++|.||++... +++.+++|++......  ....+.+|++++++++|+||+++++++......++|+||+
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   80 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM   80 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence            567789999999999999864 6889999998654322  4567889999999999999999999999999999999999


Q ss_pred             CCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccc
Q 003786          554 PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ  633 (795)
Q Consensus       554 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~  633 (795)
                      ++ +|..++...  ...+++..+..++.||+.||.|||+.+   |+|+||||+||+++.++.+||+|||.+.......  
T Consensus        81 ~~-~l~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~--  152 (283)
T cd05118          81 DT-DLYKLIKDR--QRGLPESLIKSYLYQLLQGLAFCHSHG---ILHRDLKPENLLINTEGVLKLADFGLARSFGSPV--  152 (283)
T ss_pred             CC-CHHHHHHhh--cccCCHHHHHHHHHHHHHHHHHHHHCC---eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc--
Confidence            86 777766432  246889999999999999999999988   9999999999999999999999999998765433  


Q ss_pred             ccccccccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccC--cccc-cccC--
Q 003786          634 SKTKRIVGTYGYMSPEYAQQG-LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKD--DRAW-ELID--  707 (795)
Q Consensus       634 ~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~--~~~~-~~id--  707 (795)
                      .......++..|+|||.+.+. .++.++|+||||+++|+|++|+.||...+....  ..........  ...+ ...+  
T Consensus       153 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  230 (283)
T cd05118         153 RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQ--LFKIFRTLGTPDPEVWPKFTSLA  230 (283)
T ss_pred             ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHcCCCchHhcccchhhh
Confidence            112234578899999988776 789999999999999999999998865442211  1110000000  0000 0000  


Q ss_pred             -----------ccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          708 -----------PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       708 -----------~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                                 ..............+.++|.+||+.+|.+||++.+++.+
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~  280 (283)
T cd05118         231 RNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH  280 (283)
T ss_pred             hhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence                       000012233456788999999999999999999999874

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=100.00  E-value=6.9e-33  Score=292.49  Aligned_cols=249  Identities=21%  Similarity=0.248  Sum_probs=192.7

Q ss_pred             hHHHHccCCcccccc--CcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhc-CCcccceeeeeeeecc
Q 003786          469 SVSAATANFSTENKL--GEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELE  544 (795)
Q Consensus       469 ~i~~~~~~~~~~~~L--G~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~  544 (795)
                      ++....++|++.+.+  |+|+||.||+++.. +++.+|+|++.......     .|+.....+ +||||+++++.+...+
T Consensus         8 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-----~e~~~~~~~~~h~~iv~~~~~~~~~~   82 (267)
T PHA03390          8 ELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-----IEPMVHQLMKDNPNFIKLYYSVTTLK   82 (267)
T ss_pred             HHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-----hhHHHHHHhhcCCCEEEEEEEEecCC
Confidence            344455677777777  99999999999864 57889999986532111     122222222 7999999999999999


Q ss_pred             eeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCC-Ceeeecccc
Q 003786          545 EKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDM-NPKISDFGM  623 (795)
Q Consensus       545 ~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~-~vkL~DFGl  623 (795)
                      ..++||||+++++|.+++...   ..+++..+..++.||++||.|||+.+   ++||||||+||+++.++ .++|+|||+
T Consensus        83 ~~~iv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~l~dfg~  156 (267)
T PHA03390         83 GHVLIMDYIKDGDLFDLLKKE---GKLSEAEVKKIIRQLVEALNDLHKHN---IIHNDIKLENVLYDRAKDRIYLCDYGL  156 (267)
T ss_pred             eeEEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEeCCCCeEEEecCcc
Confidence            999999999999999998433   36899999999999999999999988   99999999999999998 999999999


Q ss_pred             ccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccc
Q 003786          624 ARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAW  703 (795)
Q Consensus       624 a~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~  703 (795)
                      +......      ....++..|+|||++.+..++.++|||||||++|||++|+.|+.................  . .. 
T Consensus       157 ~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~-~~-  226 (267)
T PHA03390        157 CKIIGTP------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ--Q-KK-  226 (267)
T ss_pred             ceecCCC------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh--c-cc-
Confidence            8765322      224688999999999988999999999999999999999999974433322211111111  0 00 


Q ss_pred             cccCccccchhhHHHHHHHHHHHHhhccCCCCCCCC-HHHHHHH
Q 003786          704 ELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPT-MFEVVSM  746 (795)
Q Consensus       704 ~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt-~~evl~~  746 (795)
                              ..........+.+++.+||+.+|.+||+ ++|++++
T Consensus       227 --------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h  262 (267)
T PHA03390        227 --------LPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKH  262 (267)
T ss_pred             --------CCcccccCHHHHHHHHHHhccChhhCCchHHHHhcC
Confidence                    0111134457889999999999999996 6999864

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=2.9e-34  Score=310.90  Aligned_cols=246  Identities=24%  Similarity=0.363  Sum_probs=192.6

Q ss_pred             ccccccCcCCcccEEEeEec-CcceEEEEEec--c--cCccchHHHHHHHHHHHhcCCcccceeeeeeeecce--eeEEe
Q 003786          478 STENKLGEGGFGPVYKGRLL-NGQEVAVKRLS--S--QSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEE--KILIY  550 (795)
Q Consensus       478 ~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~--~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--~~lv~  550 (795)
                      +...+||+|+|-+||+|-+. +|.+||--.++  .  +.....++|..|+.+|+.|+|||||++|+++.+...  ..+|+
T Consensus        43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT  122 (632)
T KOG0584|consen   43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT  122 (632)
T ss_pred             ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence            55678999999999999753 47777643332  1  233445889999999999999999999999987766  67899


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECC-CCCeeeeccccccccCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDK-DMNPKISDFGMARIFGG  629 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~-~~~vkL~DFGla~~~~~  629 (795)
                      |.|..|+|..++..   .+.++...+..+++||++||.|||++. ++|||||||.+||+|+. -|.|||+|+|||.....
T Consensus       123 EL~TSGtLr~Y~kk---~~~vn~kaik~W~RQILkGL~yLHs~~-PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~  198 (632)
T KOG0584|consen  123 ELFTSGTLREYRKK---HRRVNIKAIKSWCRQILKGLVYLHSQD-PPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK  198 (632)
T ss_pred             ecccCCcHHHHHHH---hccCCHHHHHHHHHHHHHHhhhhhcCC-CCccccccccceEEEcCCcCceeecchhHHHHhhc
Confidence            99999999999844   344777899999999999999999986 78999999999999975 58999999999998754


Q ss_pred             CcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcc
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT  709 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~  709 (795)
                      ..    .....|||.|||||... ..|+..+||||||+.++||+|+..|+.--.... ++...+..-.+......+-|  
T Consensus       199 s~----aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~A-QIYKKV~SGiKP~sl~kV~d--  270 (632)
T KOG0584|consen  199 SH----AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPA-QIYKKVTSGIKPAALSKVKD--  270 (632)
T ss_pred             cc----cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHH-HHHHHHHcCCCHHHhhccCC--
Confidence            32    33478999999999887 889999999999999999999999874322111 11111111111111111112  


Q ss_pred             ccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          710 LQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       710 l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                                ..+.++|.+||.. .++|||+.|+|++
T Consensus       271 ----------Pevr~fIekCl~~-~~~R~sa~eLL~d  296 (632)
T KOG0584|consen  271 ----------PEVREFIEKCLAT-KSERLSAKELLKD  296 (632)
T ss_pred             ----------HHHHHHHHHHhcC-chhccCHHHHhhC
Confidence                      3567899999999 9999999999985

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=100.00  E-value=5.7e-33  Score=291.96  Aligned_cols=243  Identities=24%  Similarity=0.316  Sum_probs=195.9

Q ss_pred             cCcCCcccEEEeEec-CcceEEEEEecccCc---cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCCCCCh
Q 003786          483 LGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG---QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSL  558 (795)
Q Consensus       483 LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL  558 (795)
                      ||.|++|.||+++.. +++.+|+|++.+...   ...+.+.+|++++++++||||+++++.+.++...++|+||+++++|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            799999999999875 488999999865432   3346789999999999999999999999999999999999999999


Q ss_pred             hhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcccccccc
Q 003786          559 DFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKR  638 (795)
Q Consensus       559 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~~~~  638 (795)
                      .+++..   ...+++..+..++.||++||.|||+.+   ++|+||+|+||+++.++.++|+|||++.......   ....
T Consensus        81 ~~~l~~---~~~l~~~~~~~~~~~i~~~l~~lH~~~---~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~---~~~~  151 (262)
T cd05572          81 WTILRD---RGLFDEYTARFYIACVVLAFEYLHNRG---IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ---KTWT  151 (262)
T ss_pred             HHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEEcCCCCEEEeeCCcccccCccc---cccc
Confidence            999843   234788999999999999999999987   9999999999999999999999999998764332   1223


Q ss_pred             cccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhhHHH
Q 003786          639 IVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLI  718 (795)
Q Consensus       639 ~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~  718 (795)
                      ..+++.|+|||.+....++.++|+||||+++|+|++|..|+..............   ....         .....+...
T Consensus       152 ~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---~~~~---------~~~~~~~~~  219 (262)
T cd05572         152 FCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDI---LKGN---------GKLEFPNYI  219 (262)
T ss_pred             ccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHH---hccC---------CCCCCCccc
Confidence            4688999999999888899999999999999999999999875543222111111   0000         001112222


Q ss_pred             HHHHHHHHHhhccCCCCCCCC-----HHHHHHH
Q 003786          719 LNRYINVGLLCVQEDAADRPT-----MFEVVSM  746 (795)
Q Consensus       719 ~~~l~~li~~cL~~dP~~RPt-----~~evl~~  746 (795)
                      ...+.+++.+||+.+|++||+     +.|++++
T Consensus       220 ~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~  252 (262)
T cd05572         220 DKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKH  252 (262)
T ss_pred             CHHHHHHHHHHccCChhhCcCCcccCHHHHhcC
Confidence            567889999999999999999     7777763

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=100.00  E-value=5e-33  Score=302.74  Aligned_cols=262  Identities=21%  Similarity=0.257  Sum_probs=193.9

Q ss_pred             cccCcC--CcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCCC
Q 003786          481 NKLGEG--GFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPN  555 (795)
Q Consensus       481 ~~LG~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~  555 (795)
                      ..||+|  +||+||++++. +++.||||++....  ....+.+++|+.+++.++||||++++++|..++..++|+||+.+
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~   83 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY   83 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence            457777  89999999864 68999999986432  22346788999999999999999999999999999999999999


Q ss_pred             CChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccc--
Q 003786          556 KSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ--  633 (795)
Q Consensus       556 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~--  633 (795)
                      ++|.+++.... ...+++..+..++.||+.||.|||+.+   |+||||||+||+++.++.+|++||+.+.........  
T Consensus        84 ~~l~~~l~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~  159 (328)
T cd08226          84 GSANSLLKTYF-PEGMSEALIGNILFGALRGLNYLHQNG---YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAK  159 (328)
T ss_pred             CCHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccc
Confidence            99998885432 234788889999999999999999987   999999999999999999999999865433211100  


Q ss_pred             ---ccccccccccccccccccccC--CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccC---------
Q 003786          634 ---SKTKRIVGTYGYMSPEYAQQG--LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKD---------  699 (795)
Q Consensus       634 ---~~~~~~~gt~~y~APE~~~~~--~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~---------  699 (795)
                         .......++..|+|||++.+.  .++.++|||||||++|||++|..|+....................         
T Consensus       160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (328)
T cd08226         160 VVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCE  239 (328)
T ss_pred             ccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchh
Confidence               001112356679999998764  578999999999999999999999865432211100000000000         


Q ss_pred             -----------------c-----ccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          700 -----------------D-----RAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       700 -----------------~-----~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                                       .     .........+.......+...+.+++.+||+.||++|||+.|++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~  308 (328)
T cd08226         240 ESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH  308 (328)
T ss_pred             hhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence                             0     0001111112222334566788999999999999999999999985

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=2.2e-33  Score=306.65  Aligned_cols=263  Identities=23%  Similarity=0.317  Sum_probs=197.4

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEeccc--CccchHHHHHHHHHHHhcCCcccceeeeeeeec-----ce
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQ--SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL-----EE  545 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~  545 (795)
                      ..+|.+.+.||+|+||.||+++.. +++.||||.+...  .......+.+|+.+++.++||||+++++++...     ..
T Consensus         4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~   83 (337)
T cd07858           4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND   83 (337)
T ss_pred             ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence            357999999999999999999864 5899999998653  223345677899999999999999999987654     34


Q ss_pred             eeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccc
Q 003786          546 KILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR  625 (795)
Q Consensus       546 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~  625 (795)
                      .++|+||+. ++|..++..   ...+++..+..++.||+.||.|||+.+   ++||||||+||+++.++.+||+|||++.
T Consensus        84 ~~lv~e~~~-~~L~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~  156 (337)
T cd07858          84 VYIVYELMD-TDLHQIIRS---SQTLSDDHCQYFLYQLLRGLKYIHSAN---VLHRDLKPSNLLLNANCDLKICDFGLAR  156 (337)
T ss_pred             EEEEEeCCC-CCHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcCcccc
Confidence            799999996 577777732   345889999999999999999999988   9999999999999999999999999998


Q ss_pred             ccCCCccccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcch-hHhHhHhh--------
Q 003786          626 IFGGDELQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSL-TLLGHAWD--------  695 (795)
Q Consensus       626 ~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~-~~~~~~~~--------  695 (795)
                      ......  .......++..|+|||.+.. ..++.++|||||||++|+|++|+.||...+.... ........        
T Consensus       157 ~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  234 (337)
T cd07858         157 TTSEKG--DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLG  234 (337)
T ss_pred             ccCCCc--ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhh
Confidence            654322  11233467889999998765 5689999999999999999999999865432111 00000000        


Q ss_pred             hccCccccccc-------CccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          696 LWKDDRAWELI-------DPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       696 ~~~~~~~~~~i-------d~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ..........+       ++.. ..........+.+++.+||+.+|++|||+++++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h  291 (337)
T cd07858         235 FIRNEKARRYIRSLPYTPRQSF-ARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH  291 (337)
T ss_pred             hcCchhhhHHHHhcCcccccCH-HHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence            00000000000       0000 01112345678899999999999999999999997

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=100.00  E-value=4.3e-34  Score=279.18  Aligned_cols=252  Identities=24%  Similarity=0.366  Sum_probs=196.3

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccC-ccchHHHHHHHHHHHhcC-CcccceeeeeeeecceeeEEee
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQ-HRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      ++.+.+..||.|.-|.|++.++. +|..+|||.+.+.. .+..+++...+.++.+.+ +|+||+.+|+|..+...++.||
T Consensus        92 ndl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMe  171 (391)
T KOG0983|consen   92 NDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICME  171 (391)
T ss_pred             HHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHH
Confidence            45566778999999999999865 48999999997653 334466777888777665 8999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      .|.. .++.++..  -.+.+++..+-++...+.+||.||.+++  .|||||+||+|||+|+.|++||+|||++-.+-...
T Consensus       172 lMs~-C~ekLlkr--ik~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSk  246 (391)
T KOG0983|consen  172 LMST-CAEKLLKR--IKGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK  246 (391)
T ss_pred             HHHH-HHHHHHHH--hcCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeeccc
Confidence            8843 44555532  2345888888899999999999999876  69999999999999999999999999987654332


Q ss_pred             cccccccccccccccccccccc---CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCc
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQ---GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP  708 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~---~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~  708 (795)
                         ..++..|-+.|||||.+.-   ..|+.++||||||++|+||.||..|+...+.+-..+....    .++.      |
T Consensus       247 ---AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvl----n~eP------P  313 (391)
T KOG0983|consen  247 ---AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVL----NEEP------P  313 (391)
T ss_pred             ---ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHH----hcCC------C
Confidence               2344679999999998853   4799999999999999999999999987554332222111    1111      1


Q ss_pred             cccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          709 TLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       709 ~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .+....  .+...+++++..||+.|+.+||...+++++
T Consensus       314 ~L~~~~--gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h  349 (391)
T KOG0983|consen  314 LLPGHM--GFSPDFQSFVKDCLTKDHRKRPKYNKLLEH  349 (391)
T ss_pred             CCCccc--CcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence            121111  145678889999999999999999999874

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=100.00  E-value=8e-34  Score=281.84  Aligned_cols=279  Identities=23%  Similarity=0.325  Sum_probs=202.8

Q ss_pred             ccCCccccccCcCCcccEEEeEecC-----cceEEEEEecccCcc--chHHHHHHHHHHHhcCCcccceeeeeeee-cce
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLN-----GQEVAVKRLSSQSGQ--GQEEFKNEIKLIAKLQHRNLVRLLGCCIE-LEE  545 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~  545 (795)
                      ...|+.+.+||+|.||.||+|.-.+     .+.+|||+++.+...  --...-+|+..++.++||||+.|..+|.+ +..
T Consensus        23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~  102 (438)
T KOG0666|consen   23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK  102 (438)
T ss_pred             HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence            3578999999999999999995322     337999998654222  23567799999999999999999999987 778


Q ss_pred             eeEEeecCCCCChhhhhhc--cCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCC----CCeeee
Q 003786          546 KILIYEYMPNKSLDFFLFD--STKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKD----MNPKIS  619 (795)
Q Consensus       546 ~~lv~E~~~~gsL~~~l~~--~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~----~~vkL~  619 (795)
                      .++++||.+...+ .+|+-  ..+.+.++...+..|+.||+.|+.|||+..   |+||||||.||||..+    |.|||+
T Consensus       103 v~l~fdYAEhDL~-~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW---vlHRDLKPaNIlvmgdgperG~VKIa  178 (438)
T KOG0666|consen  103 VWLLFDYAEHDLW-HIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW---VLHRDLKPANILVMGDGPERGRVKIA  178 (438)
T ss_pred             EEEEehhhhhhHH-HHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh---eeeccCCcceEEEeccCCccCeeEee
Confidence            8999999987544 44432  223357889999999999999999999987   9999999999999877    899999


Q ss_pred             ccccccccCCCcc-ccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCc-----ch--hHh
Q 003786          620 DFGMARIFGGDEL-QSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTN-----SL--TLL  690 (795)
Q Consensus       620 DFGla~~~~~~~~-~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~-----~~--~~~  690 (795)
                      |||+++++...-. .......+-|..|.|||.+.+ ..|+.+.|||+.|||+.||++-.+-|......     ..  +.+
T Consensus       179 DlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl  258 (438)
T KOG0666|consen  179 DLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQL  258 (438)
T ss_pred             cccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHH
Confidence            9999998865432 223455678999999998876 58999999999999999999988777543310     00  111


Q ss_pred             HhHhhhccC--cccccccCc-------------cccchhh---HH-----HHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          691 GHAWDLWKD--DRAWELIDP-------------TLQNEAS---YL-----ILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       691 ~~~~~~~~~--~~~~~~id~-------------~l~~~~~---~~-----~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                      .........  ...|.-+..             .......   ..     -.....+|+.++|+.||.+|.|+++.+++.
T Consensus       259 ~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~  338 (438)
T KOG0666|consen  259 DRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHP  338 (438)
T ss_pred             HHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhccc
Confidence            111111110  011110000             0000000   00     011257899999999999999999999998


Q ss_pred             ccccCCCCC
Q 003786          748 TNKTINLPH  756 (795)
Q Consensus       748 ~~~~~~l~~  756 (795)
                      .....++|.
T Consensus       339 yF~~d~lpp  347 (438)
T KOG0666|consen  339 YFTEDPLPP  347 (438)
T ss_pred             ccccCCCCC
Confidence            776666653

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=100.00  E-value=3.8e-33  Score=297.03  Aligned_cols=261  Identities=27%  Similarity=0.351  Sum_probs=197.8

Q ss_pred             CccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeec--ceeeEEee
Q 003786          477 FSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL--EEKILIYE  551 (795)
Q Consensus       477 ~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~E  551 (795)
                      |++.+.||+|++|.||+|+.. +++.+|+|++....  ......+.+|++++++++|||++++++++...  ...++|+|
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   80 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE   80 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence            677889999999999999875 48899999997653  33345688999999999999999999999988  88999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      |+++ +|..++...  ...+++..+..++.||++||+|||+.+   ++|+||+|+||++++++.+||+|||++.......
T Consensus        81 ~~~~-~l~~~~~~~--~~~~~~~~~~~i~~~i~~al~~LH~~~---~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~  154 (287)
T cd07840          81 YMDH-DLTGLLDSP--EVKFTESQIKCYMKQLLEGLQYLHSNG---ILHRDIKGSNILINNDGVLKLADFGLARPYTKRN  154 (287)
T ss_pred             cccc-cHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEEcCCCCEEEccccceeeccCCC
Confidence            9985 787777432  246889999999999999999999987   9999999999999999999999999998764432


Q ss_pred             cccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhcc---Cccc-----
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWK---DDRA-----  702 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~---~~~~-----  702 (795)
                      . .......++..|+|||.+.+ ..++.++||||||++++||++|+.|+........  .........   ....     
T Consensus       155 ~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  231 (287)
T cd07840         155 S-ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQ--LEKIFELCGSPTDENWPGVSK  231 (287)
T ss_pred             c-ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHHHhCCCchhhcccccc
Confidence            1 11223456888999997765 4689999999999999999999999865442211  111100000   0000     


Q ss_pred             ---cccc------CccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          703 ---WELI------DPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       703 ---~~~i------d~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                         ....      ...+.......+...+.+++.+||+.+|++||++++++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~  284 (287)
T cd07840         232 LPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH  284 (287)
T ss_pred             chhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence               0000      0000011111125678899999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=100.00  E-value=2.7e-33  Score=292.85  Aligned_cols=249  Identities=27%  Similarity=0.380  Sum_probs=203.5

Q ss_pred             CCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      +|++.++||+|+||.||+++.. +++.+|+|.+....  .....++.+|++++++++|+||+++++++.+....++|+||
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY   80 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence            4788899999999999999754 68899999986532  23345778899999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccC-CcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          553 MPNKSLDFFLFDST-KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       553 ~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      +++++|..++.... ....+++..+..++.|++.||.|||+.+   ++|+||+|+||+++.++.+||+|||++.......
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~---i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~  157 (256)
T cd08530          81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK---ILHRDLKSANILLVANDLVKIGDLGISKVLKKNM  157 (256)
T ss_pred             cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEEecCCcEEEeeccchhhhccCC
Confidence            99999999885422 2355788999999999999999999988   9999999999999999999999999998765431


Q ss_pred             ccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcccc
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQ  711 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~  711 (795)
                          .....+++.|+|||.+.+..++.++|+||||+++++|++|+.|+...+....  ...    .....         .
T Consensus       158 ----~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~--~~~----~~~~~---------~  218 (256)
T cd08530         158 ----AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDL--RYK----VQRGK---------Y  218 (256)
T ss_pred             ----cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHH----HhcCC---------C
Confidence                2234578899999999999999999999999999999999999865432211  110    01111         1


Q ss_pred             chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          712 NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       712 ~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ...+......+.+++.+||+.+|++||++.+++++
T Consensus       219 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  253 (256)
T cd08530         219 PPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS  253 (256)
T ss_pred             CCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence            11223455678899999999999999999999875

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=100.00  E-value=2.1e-33  Score=306.55  Aligned_cols=267  Identities=21%  Similarity=0.295  Sum_probs=199.5

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeee----ccee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIE----LEEK  546 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~  546 (795)
                      ..+|++.+.||+|+||.||+|+.. +++.||+|++....  ......+.+|+.+|++++||||+++++++..    ....
T Consensus         4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   83 (334)
T cd07855           4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV   83 (334)
T ss_pred             hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence            378999999999999999999864 58999999987542  2344677889999999999999999998763    3467


Q ss_pred             eEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          547 ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                      ++||||+. ++|.+++..   ...+++..+..++.||+.||.|||+.+   |+||||||+||+++.++.+||+|||++..
T Consensus        84 ~lv~e~~~-~~l~~~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~dfg~~~~  156 (334)
T cd07855          84 YVVMDLME-SDLHHIIHS---DQPLTEEHIRYFLYQLLRGLKYIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMARG  156 (334)
T ss_pred             EEEEehhh-hhHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEeccccccee
Confidence            99999996 578887733   344899999999999999999999988   99999999999999999999999999976


Q ss_pred             cCCCccc--cccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchh-HhHhH--------h
Q 003786          627 FGGDELQ--SKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLT-LLGHA--------W  694 (795)
Q Consensus       627 ~~~~~~~--~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~-~~~~~--------~  694 (795)
                      .......  .......|+..|+|||.+.+ ..++.++|||||||++|||++|+.||...+..... .....        .
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~  236 (334)
T cd07855         157 LSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVL  236 (334)
T ss_pred             ecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhh
Confidence            5332211  11123578899999998765 56899999999999999999999999654422110 00000        0


Q ss_pred             hhccCcccccccCc---cc---cchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          695 DLWKDDRAWELIDP---TL---QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       695 ~~~~~~~~~~~id~---~l---~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                      ...........++.   ..   ...........+.+++.+||+.+|++||++.+++++.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~  295 (334)
T cd07855         237 NRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHP  295 (334)
T ss_pred             hhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhCh
Confidence            00000000000000   00   0011122456788999999999999999999999964

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.8e-33  Score=293.00  Aligned_cols=251  Identities=26%  Similarity=0.336  Sum_probs=197.0

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEeccc-----CccchHHHHHHHHHHHhcCCcccceeeeeeeec--cee
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQ-----SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL--EEK  546 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~  546 (795)
                      .+|++.+.||+|+||.||+|+.. +++.||+|++...     .......+++|++++++++||||+++++++.+.  ...
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL   81 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence            47899999999999999999864 5889999987532     122345788999999999999999999998764  457


Q ss_pred             eEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          547 ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                      ++|+||+++++|.+++..   .+.+++..+..++.||+.||.|||+.+   ++|+||||+||+++.++.++|+|||+++.
T Consensus        82 ~~v~e~~~~~~L~~~~~~---~~~l~~~~~~~~~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~  155 (264)
T cd06653          82 SIFVEYMPGGSIKDQLKA---YGALTENVTRRYTRQILQGVSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKR  155 (264)
T ss_pred             EEEEEeCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECccccccc
Confidence            899999999999988843   234788889999999999999999988   99999999999999999999999999986


Q ss_pred             cCCCcc-cccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccc
Q 003786          627 FGGDEL-QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWEL  705 (795)
Q Consensus       627 ~~~~~~-~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  705 (795)
                      ...... ........++..|+|||.+.+..++.++|+|||||++|+|++|+.||.......  .....   ...      
T Consensus       156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~---~~~------  224 (264)
T cd06653         156 IQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMA--AIFKI---ATQ------  224 (264)
T ss_pred             cccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHH--HHHHH---HcC------
Confidence            532111 111223568999999999988889999999999999999999999986432111  11110   000      


Q ss_pred             cCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          706 IDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       706 id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                         ......+......+.+++.+|++ +|..||++.+++++
T Consensus       225 ---~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~  261 (264)
T cd06653         225 ---PTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH  261 (264)
T ss_pred             ---CCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence               01112233445678889999999 57999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=100.00  E-value=4.9e-33  Score=297.81  Aligned_cols=263  Identities=24%  Similarity=0.324  Sum_probs=195.1

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccCc--cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG--QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      ++|++.+.||+|++|.||+|+.. +++.||+|++.....  ...+.+.+|++++++++||||+++++++......++|||
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE   81 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence            57899999999999999999865 588999999865422  234678899999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECC-CCCeeeeccccccccCCC
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDK-DMNPKISDFGMARIFGGD  630 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~-~~~vkL~DFGla~~~~~~  630 (795)
                      |+++ +|..++... ....+++..+..++.||+.||+|||+++   |+|+||+|+||+++. ++.+||+|||++......
T Consensus        82 ~~~~-~l~~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~  156 (294)
T PLN00009         82 YLDL-DLKKHMDSS-PDFAKNPRLIKTYLYQILRGIAYCHSHR---VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP  156 (294)
T ss_pred             cccc-cHHHHHHhC-CCCCcCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCcceEEEECCCCEEEEcccccccccCCC
Confidence            9975 666665332 2233577788899999999999999987   999999999999985 557999999999765322


Q ss_pred             ccccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCc--ccc----
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDD--RAW----  703 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~--~~~----  703 (795)
                      .  .......+++.|+|||.+.+ ..++.++|||||||++|+|++|+.|+........  ...........  ..+    
T Consensus       157 ~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  232 (294)
T PLN00009        157 V--RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDE--LFKIFRILGTPNEETWPGVT  232 (294)
T ss_pred             c--cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhCCCChhhccccc
Confidence            1  11223467889999998866 4678999999999999999999999875432211  11100000000  000    


Q ss_pred             ---c--ccCcccc----chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          704 ---E--LIDPTLQ----NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       704 ---~--~id~~l~----~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                         .  ...+...    ..........+.+++.+||+.+|++||++.+++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~  284 (294)
T PLN00009        233 SLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH  284 (294)
T ss_pred             cchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence               0  0000000    00112234567899999999999999999999974

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=100.00  E-value=5.5e-33  Score=300.86  Aligned_cols=248  Identities=31%  Similarity=0.422  Sum_probs=195.1

Q ss_pred             CCccccccCcCCcccEEEeEec-CcceEEEEEecccCc---cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG---QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      .|+..+.||+|+||.||+++.. +++.+|+|++.....   .....+.+|++++++++|||++++++++.+++..++|||
T Consensus        26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  105 (317)
T cd06635          26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME  105 (317)
T ss_pred             hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence            3778899999999999999864 588999999864322   233568889999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      |+++ +|.+.+...  ...+++..+..++.||+.||.|||+.+   |+||||+|+||+++.++.+||+|||++.....  
T Consensus       106 ~~~g-~l~~~~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~~---i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~--  177 (317)
T cd06635         106 YCLG-SASDLLEVH--KKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASIASP--  177 (317)
T ss_pred             CCCC-CHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcccEEECCCCCEEEecCCCccccCC--
Confidence            9975 666655322  344889999999999999999999988   99999999999999999999999999875432  


Q ss_pred             ccccccccccccccccccccc---cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCc
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQ---QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP  708 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~---~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~  708 (795)
                          .....|++.|+|||++.   .+.++.++|||||||++|||++|..|+........  ....   .....      +
T Consensus       178 ----~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~--~~~~---~~~~~------~  242 (317)
T cd06635         178 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA--LYHI---AQNES------P  242 (317)
T ss_pred             ----cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH--HHHH---HhccC------C
Confidence                22346889999999873   45789999999999999999999999754321111  1000   00000      0


Q ss_pred             cccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          709 TLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       709 ~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                         ..........+.+++.+||+.+|.+||++.+|++++-.
T Consensus       243 ---~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~  280 (317)
T cd06635         243 ---TLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFV  280 (317)
T ss_pred             ---CCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhh
Confidence               00111234467889999999999999999999997644

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>PHA02882 putative serine/threonine kinase; Provisional

Probab=100.00  E-value=8.6e-33  Score=296.03  Aligned_cols=260  Identities=16%  Similarity=0.178  Sum_probs=182.8

Q ss_pred             ccCCccccccCcCCcccEEEeEecC----cceEEEEEecccCccchH-----------HHHHHHHHHHhcCCcccceeee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLN----GQEVAVKRLSSQSGQGQE-----------EFKNEIKLIAKLQHRNLVRLLG  538 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~-----------~~~~E~~~l~~l~h~niv~l~~  538 (795)
                      ..+|++.++||+|+||.||+|+..+    +..+|+|+..........           ....+...+..++|++|+++++
T Consensus        11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~   90 (294)
T PHA02882         11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG   90 (294)
T ss_pred             CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence            4689999999999999999998654    345666654332211111           1122334456678999999998


Q ss_pred             eeeecc----eeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCC
Q 003786          539 CCIELE----EKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDM  614 (795)
Q Consensus       539 ~~~~~~----~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~  614 (795)
                      ++....    ..++++|++.. ++.+.+..   ....++..+..++.|+++||.|||+.+   |+||||||+|||++.++
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiHrDiKp~Nill~~~~  163 (294)
T PHA02882         91 CGSFKRCRMYYRFILLEKLVE-NTKEIFKR---IKCKNKKLIKNIMKDMLTTLEYIHEHG---ISHGDIKPENIMVDGNN  163 (294)
T ss_pred             eeeEecCCceEEEEEEehhcc-CHHHHHHh---hccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCC
Confidence            766543    34677887644 44444422   123467788899999999999999988   99999999999999999


Q ss_pred             CeeeeccccccccCCCcc-----cccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhH
Q 003786          615 NPKISDFGMARIFGGDEL-----QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTL  689 (795)
Q Consensus       615 ~vkL~DFGla~~~~~~~~-----~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~  689 (795)
                      .+||+|||+++.+.....     ........||+.|+|||++.+..++.++|||||||++|||++|..||..........
T Consensus       164 ~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~  243 (294)
T PHA02882        164 RGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLI  243 (294)
T ss_pred             cEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHH
Confidence            999999999986532211     111223469999999999999999999999999999999999999997653222111


Q ss_pred             hHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHc
Q 003786          690 LGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT  748 (795)
Q Consensus       690 ~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~  748 (795)
                      ..........     +..+.+.   ....+..+.+++..|++.+|++||++.++++.++
T Consensus       244 ~~~~~~~~~~-----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~  294 (294)
T PHA02882        244 HAAKCDFIKR-----LHEGKIK---IKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD  294 (294)
T ss_pred             HHhHHHHHHH-----hhhhhhc---cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence            1111111000     0001000   1112456788999999999999999999998763

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-33  Score=308.69  Aligned_cols=256  Identities=27%  Similarity=0.353  Sum_probs=198.5

Q ss_pred             CCccccccCcCCcccEEEeEe-cCcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecc------eee
Q 003786          476 NFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELE------EKI  547 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~~~  547 (795)
                      .|...+.||+|+||.||+|++ .+|+.||||.+++.. ....+...+|+++|++++|||||++++.-.+..      ...
T Consensus        14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v   93 (732)
T KOG4250|consen   14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV   93 (732)
T ss_pred             ceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence            356678999999999999995 569999999997643 345677889999999999999999999865544      457


Q ss_pred             EEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEEC--CCCC--eeeecccc
Q 003786          548 LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLD--KDMN--PKISDFGM  623 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~--~~~~--vkL~DFGl  623 (795)
                      +|||||.+|+|...+.+.....-+++.+.+.+...+..||.|||+++   |+||||||.||++-  .+|.  .||+|||.
T Consensus        94 lvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~---IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~  170 (732)
T KOG4250|consen   94 LVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG---IVHRDLKPGNIVLQIGEDGQSIYKLTDFGA  170 (732)
T ss_pred             EEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC---ceeccCCCCcEEEeecCCCceEEeeecccc
Confidence            99999999999999988777788999999999999999999999887   99999999999993  4444  69999999


Q ss_pred             ccccCCCcccccccccccccccccccccc-cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCc--
Q 003786          624 ARIFGGDELQSKTKRIVGTYGYMSPEYAQ-QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDD--  700 (795)
Q Consensus       624 a~~~~~~~~~~~~~~~~gt~~y~APE~~~-~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~--  700 (795)
                      |+.+..+.   ......||+.|++||... .+.|+..+|.|||||++|+.+||..||.....+............+..  
T Consensus       171 Arel~d~s---~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~  247 (732)
T KOG4250|consen  171 ARELDDNS---LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSG  247 (732)
T ss_pred             cccCCCCC---eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCc
Confidence            99876554   456689999999999998 589999999999999999999999999654433211111110111110  


Q ss_pred             -----------c-cccccCccccchhhHHHHHHHHHHHHhhccCCCCCCC
Q 003786          701 -----------R-AWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRP  738 (795)
Q Consensus       701 -----------~-~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RP  738 (795)
                                 + .+...-|. ..........++-..+..+|..+|++|-
T Consensus       248 v~i~~~~~eNgpv~~s~~lP~-p~~Ls~~l~~~~~kwLa~~L~~~~~~~~  296 (732)
T KOG4250|consen  248 VAIGAQEEENGPVEWSSTLPQ-PNHLSRGLATRLTKWLASMLEWNPRKRG  296 (732)
T ss_pred             eeEeeecccCCceeeeccCCC-cccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence                       0 00000011 1223344555677778888888998887

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=100.00  E-value=6.5e-33  Score=296.61  Aligned_cols=246  Identities=24%  Similarity=0.330  Sum_probs=197.0

Q ss_pred             cccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCCCCC
Q 003786          479 TENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKS  557 (795)
Q Consensus       479 ~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gs  557 (795)
                      ...+||+|+||.||++... +++.||||++........+.+.+|+.++++++|+||+++++.+...+..++||||+++++
T Consensus        24 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~  103 (292)
T cd06657          24 NFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA  103 (292)
T ss_pred             hHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCc
Confidence            3468999999999999864 688999999865544556678999999999999999999999999999999999999999


Q ss_pred             hhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccccccc
Q 003786          558 LDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTK  637 (795)
Q Consensus       558 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~~~  637 (795)
                      |.+++..    ..+++..+..++.|++.||+|||+.+   ++|+||+|+||++++++.++|+|||++.......  ....
T Consensus       104 L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~g---ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~--~~~~  174 (292)
T cd06657         104 LTDIVTH----TRMNEEQIAAVCLAVLKALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PRRK  174 (292)
T ss_pred             HHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEcccccceeccccc--cccc
Confidence            9887732    24788899999999999999999988   9999999999999999999999999987654322  1123


Q ss_pred             ccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhhHH
Q 003786          638 RIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYL  717 (795)
Q Consensus       638 ~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~  717 (795)
                      ...|++.|+|||.+.+..++.++|+||+||++|+|++|..|+........  .......         ..+.+.  ....
T Consensus       175 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~--~~~~~~~---------~~~~~~--~~~~  241 (292)
T cd06657         175 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA--MKMIRDN---------LPPKLK--NLHK  241 (292)
T ss_pred             ccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHhh---------CCcccC--Cccc
Confidence            35688999999999888899999999999999999999999864332111  1111000         000000  0011


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          718 ILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       718 ~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ....+.+++.+||+.+|.+||++.+++++
T Consensus       242 ~~~~l~~li~~~l~~~P~~R~~~~~ll~~  270 (292)
T cd06657         242 VSPSLKGFLDRLLVRDPAQRATAAELLKH  270 (292)
T ss_pred             CCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence            23456789999999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.8e-33  Score=290.59  Aligned_cols=245  Identities=21%  Similarity=0.244  Sum_probs=189.6

Q ss_pred             cccCcCCcccEEEeEec-CcceEEEEEecccCcc---chHHHHHHHHHH-HhcCCcccceeeeeeeecceeeEEeecCCC
Q 003786          481 NKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQ---GQEEFKNEIKLI-AKLQHRNLVRLLGCCIELEEKILIYEYMPN  555 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l-~~l~h~niv~l~~~~~~~~~~~lv~E~~~~  555 (795)
                      +.||+|+||.||+|+.. +++.||||++.+....   ....+..|..++ ...+|||++++++++...+..++|+||+++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            57999999999999864 5889999998654321   223345555544 455899999999999999999999999999


Q ss_pred             CChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccccc
Q 003786          556 KSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK  635 (795)
Q Consensus       556 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~  635 (795)
                      ++|..++..   ...+++..+..++.||++||.|||+.+   ++|+||+|+||+++.++.+||+|||++.....      
T Consensus        82 ~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------  149 (260)
T cd05611          82 GDCASLIKT---LGGLPEDWAKQYIAEVVLGVEDLHQRG---IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE------  149 (260)
T ss_pred             CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEeecccceeccc------
Confidence            999998843   345889999999999999999999987   99999999999999999999999999875432      


Q ss_pred             ccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhh
Q 003786          636 TKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEAS  715 (795)
Q Consensus       636 ~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~  715 (795)
                      .....+++.|+|||.+.+..++.++||||||+++|+|++|..|+........  ...    ......      .......
T Consensus       150 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~~~----~~~~~~------~~~~~~~  217 (260)
T cd05611         150 NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAV--FDN----ILSRRI------NWPEEVK  217 (260)
T ss_pred             cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHH--HHH----HHhccc------CCCCccc
Confidence            2235688999999999888899999999999999999999999865432211  100    000000      0011111


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          716 YLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       716 ~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      ..++..+.+++.+||+.+|++||++.++.+.|..
T Consensus       218 ~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~  251 (260)
T cd05611         218 EFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSH  251 (260)
T ss_pred             ccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcC
Confidence            2345678899999999999999987666555443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=100.00  E-value=8.8e-33  Score=298.77  Aligned_cols=264  Identities=20%  Similarity=0.203  Sum_probs=194.3

Q ss_pred             ccccccCcCCcccEEEeEecCcceEEEEEeccc--CccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCCC
Q 003786          478 STENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQ--SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPN  555 (795)
Q Consensus       478 ~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~  555 (795)
                      .+++.+|.|+++.||+++. +++.||||++...  .....+.+.+|+++++.++||||+++++++.+.+..+++|||+++
T Consensus         5 ~i~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~   83 (314)
T cd08216           5 LIGKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAY   83 (314)
T ss_pred             hhhHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCC
Confidence            4445555666655555544 6899999998654  334557899999999999999999999999999999999999999


Q ss_pred             CChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc---
Q 003786          556 KSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL---  632 (795)
Q Consensus       556 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~---  632 (795)
                      ++|.+++.... ...+++..+..++.|+++||.|||+++   |+||||||+||+++.++.+||+|||.+........   
T Consensus        84 ~~l~~~l~~~~-~~~~~~~~~~~~~~~l~~~L~~LH~~~---ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~  159 (314)
T cd08216          84 GSCEDLLKTHF-PEGLPELAIAFILKDVLNALDYIHSKG---FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQR  159 (314)
T ss_pred             CCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCcceEEEecCCceEEecCccceeecccccccc
Confidence            99999986432 234788899999999999999999988   99999999999999999999999999875432111   


Q ss_pred             --ccccccccccccccccccccc--CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhh----ccCc----
Q 003786          633 --QSKTKRIVGTYGYMSPEYAQQ--GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDL----WKDD----  700 (795)
Q Consensus       633 --~~~~~~~~gt~~y~APE~~~~--~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~----~~~~----  700 (795)
                        ........++..|+|||++..  ..++.++|+|||||+++||++|..||......... .......    ....    
T Consensus       160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  238 (314)
T cd08216         160 VVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQML-LEKVRGTVPCLLDKSTYPL  238 (314)
T ss_pred             ccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHhccCccccccCchhh
Confidence              111233457788999999866  35889999999999999999999998654322111 1110000    0000    


Q ss_pred             ---cccc----ccCcc----ccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          701 ---RAWE----LIDPT----LQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       701 ---~~~~----~id~~----l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                         ....    ..++.    ............+.+++.+||+.+|++|||+++++++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p  296 (314)
T cd08216         239 YEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHS  296 (314)
T ss_pred             hcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCc
Confidence               0000    00000    01112233456788999999999999999999999853

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=100.00  E-value=4.3e-33  Score=304.39  Aligned_cols=266  Identities=26%  Similarity=0.301  Sum_probs=197.6

Q ss_pred             HccCCccccccCcCCcccEEEeEec-CcceEEEEEeccc--CccchHHHHHHHHHHHhc-CCcccceeeeeeeec--cee
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQ--SGQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIEL--EEK  546 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~--~~~  546 (795)
                      ..++|++.+.||+|+||.||+|... +++.+|||++...  .......+.+|+.+++++ +||||+++++++...  ...
T Consensus         5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~   84 (337)
T cd07852           5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI   84 (337)
T ss_pred             hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence            3578999999999999999999865 5889999988543  223345677899999999 999999999998654  367


Q ss_pred             eEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          547 ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                      ++||||+++ +|..++..    ..+++..+..++.||+.||+|||+.+   |+||||||+||+++.++.+||+|||++..
T Consensus        85 ~lv~e~~~~-~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~---i~H~dl~p~nill~~~~~~kl~d~g~~~~  156 (337)
T cd07852          85 YLVFEYMET-DLHAVIRA----NILEDVHKRYIMYQLLKALKYIHSGN---VIHRDLKPSNILLNSDCRVKLADFGLARS  156 (337)
T ss_pred             EEEeccccc-CHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccchhc
Confidence            999999984 88777733    25788889999999999999999988   99999999999999999999999999986


Q ss_pred             cCCCccc---cccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhH-hHhHhh------
Q 003786          627 FGGDELQ---SKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTL-LGHAWD------  695 (795)
Q Consensus       627 ~~~~~~~---~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~-~~~~~~------  695 (795)
                      .......   .......|+..|+|||.+.+ ..++.++||||||+++|+|++|+.||.......... ......      
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~  236 (337)
T cd07852         157 LSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAED  236 (337)
T ss_pred             cccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence            5433211   12234568999999998754 568899999999999999999999986544222100 000000      


Q ss_pred             --hccCcccccccCc---cc---cchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          696 --LWKDDRAWELIDP---TL---QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       696 --~~~~~~~~~~id~---~l---~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                        .+.......+++.   .-   ...........+.+++.+||+.+|++|||+.+++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~  295 (337)
T cd07852         237 IESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH  295 (337)
T ss_pred             HHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence              0000000000100   00   000111134678899999999999999999999986

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=100.00  E-value=1.2e-32  Score=294.29  Aligned_cols=252  Identities=23%  Similarity=0.279  Sum_probs=196.5

Q ss_pred             CCccccccCcCCcccEEEeEe----cCcceEEEEEecccCc----cchHHHHHHHHHHHhc-CCcccceeeeeeeeccee
Q 003786          476 NFSTENKLGEGGFGPVYKGRL----LNGQEVAVKRLSSQSG----QGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEEK  546 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~  546 (795)
                      +|++.+.||+|+||.||+++.    .+|+.||+|++.....    ...+.+.+|+++++++ +|+||+++++.+..+...
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL   80 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence            478889999999999999985    3688999999865321    2346788999999999 599999999999999999


Q ss_pred             eEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          547 ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                      ++||||+++++|.+++..   ...+++..+..++.|++.||.|||+.+   ++||||+|+|||++.++.+||+|||++..
T Consensus        81 ~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~  154 (290)
T cd05613          81 HLILDYINGGELFTHLSQ---RERFKEQEVQIYSGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKE  154 (290)
T ss_pred             EEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEECCCCCEEEeeCcccee
Confidence            999999999999998843   345788899999999999999999988   99999999999999999999999999986


Q ss_pred             cCCCccccccccccccccccccccccc--CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCccccc
Q 003786          627 FGGDELQSKTKRIVGTYGYMSPEYAQQ--GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWE  704 (795)
Q Consensus       627 ~~~~~~~~~~~~~~gt~~y~APE~~~~--~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  704 (795)
                      ....... ......|+..|+|||.+..  ..++.++||||||+++|+|++|..|+........ ............    
T Consensus       155 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~-~~~~~~~~~~~~----  228 (290)
T cd05613         155 FHEDEVE-RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNS-QAEISRRILKSE----  228 (290)
T ss_pred             ccccccc-ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcccc-HHHHHHHhhccC----
Confidence            5433211 1223568899999998865  3578899999999999999999999864332111 111111110000    


Q ss_pred             ccCccccchhhHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHH
Q 003786          705 LIDPTLQNEASYLILNRYINVGLLCVQEDAADRP-----TMFEVVSM  746 (795)
Q Consensus       705 ~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RP-----t~~evl~~  746 (795)
                             ...+......+.+++.+||+.+|++||     ++.+++++
T Consensus       229 -------~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~  268 (290)
T cd05613         229 -------PPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH  268 (290)
T ss_pred             -------CCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence                   011222345677899999999999997     77777764

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7e-33  Score=289.28  Aligned_cols=248  Identities=30%  Similarity=0.409  Sum_probs=202.1

Q ss_pred             CCccccccCcCCcccEEEeEec-CcceEEEEEecccCc--cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG--QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      +|++.+.||+|++|.||+++.. +++.|++|.+.....  ...+.+.+|++++++++|||++++++++.+....+++|||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY   80 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence            4788899999999999999865 578999999976543  3456789999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      +++++|.+++...   ..+++..+..++.|++.||.|||+.+   |+||||||+||+++.++.++|+|||++........
T Consensus        81 ~~~~~L~~~~~~~---~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~  154 (254)
T cd06627          81 AENGSLRQIIKKF---GPFPESLVAVYVYQVLQGLAYLHEQG---VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK  154 (254)
T ss_pred             CCCCcHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEECCCCCEEEeccccceecCCCcc
Confidence            9999999988433   56899999999999999999999988   99999999999999999999999999987654332


Q ss_pred             cccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccc
Q 003786          633 QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQN  712 (795)
Q Consensus       633 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~  712 (795)
                      .  .....++..|+|||.+.+..++.++||||+|+++++|++|..|+........     .+.... ...         .
T Consensus       155 ~--~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~-----~~~~~~-~~~---------~  217 (254)
T cd06627         155 D--DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAA-----LFRIVQ-DDH---------P  217 (254)
T ss_pred             c--ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHH-----HHHHhc-cCC---------C
Confidence            1  2335688999999999888899999999999999999999999864331111     011100 000         0


Q ss_pred             hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          713 EASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       713 ~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ..+......+.+++.+||+.+|++||++.+++.+
T Consensus       218 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~  251 (254)
T cd06627         218 PLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKH  251 (254)
T ss_pred             CCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcC
Confidence            1112234577789999999999999999999863

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=100.00  E-value=5.1e-33  Score=299.75  Aligned_cols=267  Identities=24%  Similarity=0.345  Sum_probs=193.6

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecce-----
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEE-----  545 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-----  545 (795)
                      .++|++.++||+|+||.||+|+.. +++.||||++....  ......+.+|++++++++||||+++++++.....     
T Consensus        11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   90 (310)
T cd07865          11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY   90 (310)
T ss_pred             hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence            467999999999999999999865 58899999886432  2223456789999999999999999999876543     


Q ss_pred             ---eeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccc
Q 003786          546 ---KILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFG  622 (795)
Q Consensus       546 ---~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFG  622 (795)
                         .++||||+.+ +|...+..  ....+++..+..++.||+.||.|||+.+   ++|+||||+||+++.++.+||+|||
T Consensus        91 ~~~~~lv~e~~~~-~l~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg  164 (310)
T cd07865          91 KGSFYLVFEFCEH-DLAGLLSN--KNVKFTLSEIKKVMKMLLNGLYYIHRNK---ILHRDMKAANILITKDGILKLADFG  164 (310)
T ss_pred             CceEEEEEcCCCc-CHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEECCCCcEEECcCC
Confidence               4999999975 67666632  2235889999999999999999999987   9999999999999999999999999


Q ss_pred             cccccCCCccc--ccccccccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCcch-hHhHhHhhhcc
Q 003786          623 MARIFGGDELQ--SKTKRIVGTYGYMSPEYAQQG-LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSL-TLLGHAWDLWK  698 (795)
Q Consensus       623 la~~~~~~~~~--~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~-~~~~~~~~~~~  698 (795)
                      ++.........  .......++..|+|||.+.+. .++.++||||||+++|||++|+.|+........ ..+........
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~  244 (310)
T cd07865         165 LARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSIT  244 (310)
T ss_pred             CcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence            99865432211  112234578899999987654 578999999999999999999998865432211 11111100000


Q ss_pred             Cc-----ccccccC----c-cccchhh-----HHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          699 DD-----RAWELID----P-TLQNEAS-----YLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       699 ~~-----~~~~~id----~-~l~~~~~-----~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ..     ......+    + .......     ......+.++|.+||+.+|++|||++|++++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h  307 (310)
T cd07865         245 PEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH  307 (310)
T ss_pred             hhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence            00     0000000    0 0000000     0112456789999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=100.00  E-value=5.8e-33  Score=290.27  Aligned_cols=251  Identities=24%  Similarity=0.376  Sum_probs=205.2

Q ss_pred             CCccccccCcCCcccEEEeEec-CcceEEEEEecccCc--cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG--QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      +|++.+.||+|+||.||++... +++.+|+|++.....  .....+.+|+++++.++|||++++++.+...+..++|+||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~   80 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY   80 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence            5788899999999999999865 588999999865433  4556788999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccC-CcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          553 MPNKSLDFFLFDST-KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       553 ~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      +++++|.+++.... ....+++..+..++.++++||.|||+.+   ++|+||+|+||+++.++.++|+|||++.......
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~---~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~  157 (258)
T cd08215          81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK---ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV  157 (258)
T ss_pred             cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence            99999999885432 2356899999999999999999999987   9999999999999999999999999998764432


Q ss_pred             ccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcccc
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQ  711 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~  711 (795)
                        .......|++.|+|||.+.+..++.++|+||+|+++++|++|..|+........  ...   . .....         
T Consensus       158 --~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~--~~~---~-~~~~~---------  220 (258)
T cd08215         158 --DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLEL--ALK---I-LKGQY---------  220 (258)
T ss_pred             --ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHH--HHH---H-hcCCC---------
Confidence              122335788999999999888899999999999999999999999865432111  111   0 01110         


Q ss_pred             chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          712 NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       712 ~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ...+......+.+++.+||..+|++||++.|++++
T Consensus       221 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  255 (258)
T cd08215         221 PPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQS  255 (258)
T ss_pred             CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            11112334577889999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=100.00  E-value=5.8e-33  Score=298.34  Aligned_cols=266  Identities=26%  Similarity=0.339  Sum_probs=197.2

Q ss_pred             HHccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecc----
Q 003786          472 AATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELE----  544 (795)
Q Consensus       472 ~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----  544 (795)
                      ...++|++.+.||+|+||.||+|+.. +++.||+|++....  ......+.+|++++++++||||+++++++.+..    
T Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~   83 (302)
T cd07864           4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD   83 (302)
T ss_pred             hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence            45678999999999999999999875 48899999986542  223456788999999999999999999987655    


Q ss_pred             ------eeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeee
Q 003786          545 ------EKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKI  618 (795)
Q Consensus       545 ------~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL  618 (795)
                            ..++|+||+++ ++...+...  ...+++..+..++.||+.||+|||+.+   |+|+||||+||++++++.+||
T Consensus        84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~kl  157 (302)
T cd07864          84 FKKDKGAFYLVFEYMDH-DLMGLLESG--LVHFSEDHIKSFMKQLLEGLNYCHKKN---FLHRDIKCSNILLNNKGQIKL  157 (302)
T ss_pred             ccccCCcEEEEEcccCc-cHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCcEEe
Confidence                  78999999987 555555322  345889999999999999999999988   999999999999999999999


Q ss_pred             eccccccccCCCccccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhc
Q 003786          619 SDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLW  697 (795)
Q Consensus       619 ~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~  697 (795)
                      +|||++........ .......++..|+|||.+.+ ..++.++|||||||+++||++|++|+........  +.......
T Consensus       158 ~dfg~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~--~~~~~~~~  234 (302)
T cd07864         158 ADFGLARLYNSEES-RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQ--LELISRLC  234 (302)
T ss_pred             CcccccccccCCcc-cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHHHh
Confidence            99999986643321 11122346788999998765 4578999999999999999999999865432111  11111100


Q ss_pred             cCc-----------ccccccCccc--cc---hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          698 KDD-----------RAWELIDPTL--QN---EASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       698 ~~~-----------~~~~~id~~l--~~---~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ...           ......++..  ..   ......+..+.+++..||+.+|++||++.+++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  299 (302)
T cd07864         235 GSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS  299 (302)
T ss_pred             CCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            000           0000000000  00   0111234678899999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=100.00  E-value=1.1e-32  Score=292.74  Aligned_cols=242  Identities=26%  Similarity=0.310  Sum_probs=187.8

Q ss_pred             ccCcCCcccEEEeEec-CcceEEEEEecccCcc---chHHHHHHHH---HHHhcCCcccceeeeeeeecceeeEEeecCC
Q 003786          482 KLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQ---GQEEFKNEIK---LIAKLQHRNLVRLLGCCIELEEKILIYEYMP  554 (795)
Q Consensus       482 ~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~---~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~  554 (795)
                      .||+|+||.||+++.. +++.||+|.+.+....   ....+..|..   .++...||+|+++++++.+.+..++||||++
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            4899999999999864 5889999998654221   1223444444   3444579999999999999999999999999


Q ss_pred             CCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcccc
Q 003786          555 NKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQS  634 (795)
Q Consensus       555 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~  634 (795)
                      +++|..++..   .+.+++..+..++.|+++||.|||+.+   |+||||||+||+++.++.+||+|||++..+....   
T Consensus        81 g~~L~~~l~~---~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~---  151 (278)
T cd05606          81 GGDLHYHLSQ---HGVFSEAEMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---  151 (278)
T ss_pred             CCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCCCCHHHEEECCCCCEEEccCcCccccCccC---
Confidence            9999988843   346899999999999999999999988   9999999999999999999999999987653221   


Q ss_pred             cccccccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccch
Q 003786          635 KTKRIVGTYGYMSPEYAQQG-LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNE  713 (795)
Q Consensus       635 ~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~  713 (795)
                       .....|+..|+|||.+.++ .++.++||||+||++|||++|+.||..............   ...      ...    .
T Consensus       152 -~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~---~~~------~~~----~  217 (278)
T cd05606         152 -PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM---TLT------MAV----E  217 (278)
T ss_pred             -CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHH---hhc------cCC----C
Confidence             2234689999999998754 689999999999999999999999875432221111100   000      001    1


Q ss_pred             hhHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHH
Q 003786          714 ASYLILNRYINVGLLCVQEDAADRP-----TMFEVVSM  746 (795)
Q Consensus       714 ~~~~~~~~l~~li~~cL~~dP~~RP-----t~~evl~~  746 (795)
                      .+......+.+++.+||+.+|++||     ++.+++++
T Consensus       218 ~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~  255 (278)
T cd05606         218 LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH  255 (278)
T ss_pred             CCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence            1122345788899999999999999     99999875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=100.00  E-value=5.1e-33  Score=294.91  Aligned_cols=250  Identities=27%  Similarity=0.342  Sum_probs=203.1

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcC-CcccceeeeeeeecceeeEE
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQ-HRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv  549 (795)
                      ++|++.+.||+|+||.||+++.. +++.||+|++.+..   ....+.+.+|++++++++ ||||+++++++...+..++|
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv   80 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV   80 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence            46889999999999999999865 68999999986532   233467889999999998 99999999999999999999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      |||+++++|.+++..   ...+++..+..++.|++.||.|||+.+   ++|+||+|+||+++.++.++|+|||++.....
T Consensus        81 ~e~~~~~~L~~~l~~---~~~l~~~~~~~i~~ql~~~l~~Lh~~~---~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~  154 (280)
T cd05581          81 LEYAPNGELLQYIRK---YGSLDEKCTRFYAAEILLALEYLHSKG---IIHRDLKPENILLDKDMHIKITDFGTAKVLDP  154 (280)
T ss_pred             EcCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEecCCccccccCC
Confidence            999999999998843   336899999999999999999999988   99999999999999999999999999987644


Q ss_pred             Cccc------------------ccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhH
Q 003786          630 DELQ------------------SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLG  691 (795)
Q Consensus       630 ~~~~------------------~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~  691 (795)
                      ....                  .......++..|+|||.+....++.++|+||||++++++++|+.|+.......  ...
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~~  232 (280)
T cd05581         155 NSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL--TFQ  232 (280)
T ss_pred             ccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH--HHH
Confidence            3221                  22234567899999999988889999999999999999999999987544211  111


Q ss_pred             hHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCH----HHHHHH
Q 003786          692 HAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTM----FEVVSM  746 (795)
Q Consensus       692 ~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~----~evl~~  746 (795)
                      ...   .           .....+...+..+.+++.+||+.+|++||++    ++++++
T Consensus       233 ~~~---~-----------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~  277 (280)
T cd05581         233 KIL---K-----------LEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH  277 (280)
T ss_pred             HHH---h-----------cCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence            110   0           0011122235578899999999999999999    888764

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=100.00  E-value=4.7e-33  Score=292.33  Aligned_cols=247  Identities=23%  Similarity=0.318  Sum_probs=195.7

Q ss_pred             cCcCCcccEEEeEecC-cceEEEEEecccCc---cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCCCCCh
Q 003786          483 LGEGGFGPVYKGRLLN-GQEVAVKRLSSQSG---QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSL  558 (795)
Q Consensus       483 LG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL  558 (795)
                      ||+|+||.||+++... ++.+++|++.....   ...+.+.+|++++++++||||+++++.+......++++||+++++|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            6899999999998764 89999999865433   3456788999999999999999999999999999999999999999


Q ss_pred             hhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc------
Q 003786          559 DFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL------  632 (795)
Q Consensus       559 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~------  632 (795)
                      .+++...   ..+++..+..++.||++||+|||+.+   ++|+||+|+||+++.++.+||+|||++........      
T Consensus        81 ~~~l~~~---~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~  154 (265)
T cd05579          81 ASLLENV---GSLDEDVARIYIAEIVLALEYLHSNG---IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDD  154 (265)
T ss_pred             HHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHcC---eecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccc
Confidence            9988542   35889999999999999999999988   99999999999999999999999999876432211      


Q ss_pred             cccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccc
Q 003786          633 QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQN  712 (795)
Q Consensus       633 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~  712 (795)
                      ........++..|+|||.+....++.++||||||+++|+|++|..|+........  ...   . .....    .    .
T Consensus       155 ~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~--~~~---~-~~~~~----~----~  220 (265)
T cd05579         155 EKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEI--FQN---I-LNGKI----E----W  220 (265)
T ss_pred             cccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH--HHH---H-hcCCc----C----C
Confidence            1122335678899999999888899999999999999999999999865432211  110   0 00000    0    0


Q ss_pred             hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          713 EASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       713 ~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      .........+.+++.+||+.+|++|||+.++.+.|..
T Consensus       221 ~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~  257 (265)
T cd05579         221 PEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNH  257 (265)
T ss_pred             CccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcC
Confidence            0000124677899999999999999999666665544

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1e-33  Score=289.84  Aligned_cols=242  Identities=25%  Similarity=0.319  Sum_probs=197.4

Q ss_pred             HccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhc-CCcccceeeeeeeecceee
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEEKI  547 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~  547 (795)
                      ...+|.++.+||+|+||+|.++..+ +.+-+|||++++..   ..+.+--..|-++|... +-|.+++++.+|+.-+.+|
T Consensus       347 ~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLy  426 (683)
T KOG0696|consen  347 KATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLY  426 (683)
T ss_pred             eecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhhee
Confidence            3467899999999999999999754 46779999997753   23344556788888766 4689999999999999999


Q ss_pred             EEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccccc
Q 003786          548 LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF  627 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~  627 (795)
                      +||||+.||+|-.++.   +-+.+.+..+..++.+||-||-+||+++   ||+||||.+|||||.+|++||+|||+++.-
T Consensus       427 FVMEyvnGGDLMyhiQ---Q~GkFKEp~AvFYAaEiaigLFFLh~kg---IiYRDLKLDNvmLd~eGHiKi~DFGmcKEn  500 (683)
T KOG0696|consen  427 FVMEYVNGGDLMYHIQ---QVGKFKEPVAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEN  500 (683)
T ss_pred             eEEEEecCchhhhHHH---HhcccCCchhhhhhHHHHHHhhhhhcCC---eeeeeccccceEeccCCceEeeeccccccc
Confidence            9999999999988884   3445778899999999999999999998   999999999999999999999999999852


Q ss_pred             CCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccC
Q 003786          628 GGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID  707 (795)
Q Consensus       628 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id  707 (795)
                      --.  ...+.+++|||.|+|||++...+|+.++|+||+||+||||+.|.+||++.++.......              ++
T Consensus       501 i~~--~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI--------------~e  564 (683)
T KOG0696|consen  501 IFD--GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAI--------------ME  564 (683)
T ss_pred             ccC--CcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH--------------HH
Confidence            211  23466799999999999999999999999999999999999999999987654432111              11


Q ss_pred             ccccchhhHHHHHHHHHHHHhhccCCCCCCC
Q 003786          708 PTLQNEASYLILNRYINVGLLCVQEDAADRP  738 (795)
Q Consensus       708 ~~l~~~~~~~~~~~l~~li~~cL~~dP~~RP  738 (795)
                      ..  -..+...+.+...++...|..+|.+|.
T Consensus       565 hn--vsyPKslSkEAv~ickg~ltK~P~kRL  593 (683)
T KOG0696|consen  565 HN--VSYPKSLSKEAVAICKGLLTKHPGKRL  593 (683)
T ss_pred             cc--CcCcccccHHHHHHHHHHhhcCCcccc
Confidence            11  113334455677788888999999985

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=100.00  E-value=2.9e-32  Score=290.30  Aligned_cols=260  Identities=26%  Similarity=0.364  Sum_probs=195.4

Q ss_pred             CccccccCcCCcccEEEeEecC-cceEEEEEecccCcc--chHHHHHHHHHHHhc---CCcccceeeeeeeecce-----
Q 003786          477 FSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQ--GQEEFKNEIKLIAKL---QHRNLVRLLGCCIELEE-----  545 (795)
Q Consensus       477 ~~~~~~LG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~-----  545 (795)
                      |++.+.||+|+||.||+|+... ++.+|+|++......  ....+.+|+.+++++   +||||+++++++...+.     
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            6778899999999999999764 899999999643222  234566788877766   59999999999998776     


Q ss_pred             eeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccc
Q 003786          546 KILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR  625 (795)
Q Consensus       546 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~  625 (795)
                      .+++|||+++ +|.+++.... ...+++..+..++.||++||.|||+.+   ++|+||+|+||+++.++.+||+|||++.
T Consensus        81 ~~l~~e~~~~-~l~~~l~~~~-~~~l~~~~~~~~~~~i~~al~~LH~~~---i~h~~l~~~nili~~~~~~~l~dfg~~~  155 (287)
T cd07838          81 LTLVFEHVDQ-DLATYLSKCP-KPGLPPETIKDLMRQLLRGVDFLHSHR---IVHRDLKPQNILVTSDGQVKIADFGLAR  155 (287)
T ss_pred             eEEEehhccc-CHHHHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhEEEccCCCEEEeccCcce
Confidence            8999999985 7877774322 235889999999999999999999988   9999999999999999999999999998


Q ss_pred             ccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccC------
Q 003786          626 IFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKD------  699 (795)
Q Consensus       626 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~------  699 (795)
                      ......   ......++..|+|||.+.+..++.++|+|||||++|||++|..|+........  ..........      
T Consensus       156 ~~~~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  230 (287)
T cd07838         156 IYSFEM---ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQ--LDKIFDVIGLPSEEEW  230 (287)
T ss_pred             eccCCc---ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHH--HHHHHHHcCCCChHhc
Confidence            764332   12234578899999999988999999999999999999999988865432211  1111110000      


Q ss_pred             --ccc--ccccCccc---cchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          700 --DRA--WELIDPTL---QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       700 --~~~--~~~id~~l---~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                        ...  ........   ...........+.+++.+||+.+|++||++.|++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~  284 (287)
T cd07838         231 PRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH  284 (287)
T ss_pred             CCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence              000  00000000   011222345677899999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=100.00  E-value=7.1e-34  Score=298.57  Aligned_cols=244  Identities=25%  Similarity=0.390  Sum_probs=199.8

Q ss_pred             ccccCcCCcccEEEeEe-cCcceEEEEEeccc--CccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCCCC
Q 003786          480 ENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQ--SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNK  556 (795)
Q Consensus       480 ~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g  556 (795)
                      .+.||+|.||+||-|++ ++|+.||||++.+.  ....+..+++|+.||++++||.||.+.-.|+..+..+.|||.+.|.
T Consensus       569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD  648 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD  648 (888)
T ss_pred             HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence            57899999999999986 46999999999764  3345578999999999999999999999999999999999999877


Q ss_pred             ChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCC---CCeeeeccccccccCCCccc
Q 003786          557 SLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKD---MNPKISDFGMARIFGGDELQ  633 (795)
Q Consensus       557 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~---~~vkL~DFGla~~~~~~~~~  633 (795)
                      -|+-+|.  ...+.+++.....++.||+.||.|||.++   |+|+||||+|||+.+.   ..+||+|||+|++++...+ 
T Consensus       649 MLEMILS--sEkgRL~er~TkFlvtQIL~ALr~LH~kn---IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksF-  722 (888)
T KOG4236|consen  649 MLEMILS--SEKGRLPERITKFLVTQILVALRYLHFKN---IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSF-  722 (888)
T ss_pred             HHHHHHH--hhcccchHHHHHHHHHHHHHHHHHhhhcc---eeeccCCchheeeccCCCCCceeeccccceeecchhhh-
Confidence            7766663  33456888888999999999999999998   9999999999999654   4799999999999876553 


Q ss_pred             ccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchh-HhHhHhhhccCcccccccCccccc
Q 003786          634 SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLT-LLGHAWDLWKDDRAWELIDPTLQN  712 (795)
Q Consensus       634 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~id~~l~~  712 (795)
                        .+..+|||.|+|||+++++.|...-|+||.|||+|--++|..||.-.  +++. .++.+.          ++   ...
T Consensus       723 --RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd--EdIndQIQNAa----------FM---yPp  785 (888)
T KOG4236|consen  723 --RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED--EDINDQIQNAA----------FM---YPP  785 (888)
T ss_pred             --hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc--cchhHHhhccc----------cc---cCC
Confidence              34578999999999999999999999999999999999999887532  2221 111111          11   112


Q ss_pred             hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          713 EASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       713 ~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ....+.....+++|...||..-++|-+..+-+.+
T Consensus       786 ~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh  819 (888)
T KOG4236|consen  786 NPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSH  819 (888)
T ss_pred             CchhhcCHHHHHHHHHHHHHHHHHhcchHhhccc
Confidence            2233455677899999999999999999887764

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=100.00  E-value=2.3e-32  Score=298.49  Aligned_cols=267  Identities=22%  Similarity=0.281  Sum_probs=197.5

Q ss_pred             ccCCc-cccccCcCCcccEEEeEec-CcceEEEEEecccCccc--------------hHHHHHHHHHHHhcCCcccceee
Q 003786          474 TANFS-TENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQG--------------QEEFKNEIKLIAKLQHRNLVRLL  537 (795)
Q Consensus       474 ~~~~~-~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~h~niv~l~  537 (795)
                      .++|. +.+.||+|+||.||+|+.. +++.||||++.......              ...+.+|++++++++||||++++
T Consensus         7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~   86 (335)
T PTZ00024          7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLV   86 (335)
T ss_pred             ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeee
Confidence            35565 4577999999999999865 58999999986532221              12477899999999999999999


Q ss_pred             eeeeecceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCee
Q 003786          538 GCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPK  617 (795)
Q Consensus       538 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vk  617 (795)
                      +++...+..++||||+. ++|.+++..   ...+++..+..++.||+.||.|||+.+   |+|+||+|+||+++.++.+|
T Consensus        87 ~~~~~~~~~~lv~e~~~-~~l~~~l~~---~~~~~~~~~~~~~~ql~~aL~~LH~~~---i~H~dl~~~nill~~~~~~k  159 (335)
T PTZ00024         87 DVYVEGDFINLVMDIMA-SDLKKVVDR---KIRLTESQVKCILLQILNGLNVLHKWY---FMHRDLSPANIFINSKGICK  159 (335)
T ss_pred             EEEecCCcEEEEEeccc-cCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHeEECCCCCEE
Confidence            99999999999999997 578777743   345888999999999999999999988   99999999999999999999


Q ss_pred             eeccccccccCCCcc------------cccccccccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCC
Q 003786          618 ISDFGMARIFGGDEL------------QSKTKRIVGTYGYMSPEYAQQG-LFSIKSDVFSFGVLLLETLSSKRNTDFSNT  684 (795)
Q Consensus       618 L~DFGla~~~~~~~~------------~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~  684 (795)
                      |+|||++........            ........+++.|+|||.+.+. .++.++|||||||++|||++|..|+.....
T Consensus       160 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~  239 (335)
T PTZ00024        160 IADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENE  239 (335)
T ss_pred             ECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence            999999986541110            1111223568889999988764 579999999999999999999999875543


Q ss_pred             cchhHhHhHhhhccCcc-----------cccccCccc---cchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          685 NSLTLLGHAWDLWKDDR-----------AWELIDPTL---QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       685 ~~~~~~~~~~~~~~~~~-----------~~~~id~~l---~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      ...  ............           .........   ...........+.+++.+||+.+|++||++.|++.+.-.
T Consensus       240 ~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~  316 (335)
T PTZ00024        240 IDQ--LGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYF  316 (335)
T ss_pred             HHH--HHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCccc
Confidence            221  111111110000           000000000   001112234567899999999999999999999986433

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.1e-32  Score=301.77  Aligned_cols=259  Identities=22%  Similarity=0.309  Sum_probs=193.4

Q ss_pred             HHccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecc----
Q 003786          472 AATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELE----  544 (795)
Q Consensus       472 ~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----  544 (795)
                      ....+|.+.+.||+|+||.||+|+.. +++.||||++.+..  ......+.+|+.++++++||||+++++++....    
T Consensus        12 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~   91 (342)
T cd07879          12 ELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDE   91 (342)
T ss_pred             ccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCC
Confidence            33578999999999999999999864 68999999986532  223456889999999999999999999987543    


Q ss_pred             --eeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccc
Q 003786          545 --EKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFG  622 (795)
Q Consensus       545 --~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFG  622 (795)
                        ..++|+||+.. +|..++     ...+++..+..++.|++.||+|||+.+   |+||||||+||+++.++.+||+|||
T Consensus        92 ~~~~~lv~e~~~~-~l~~~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dlkp~NIll~~~~~~kL~dfg  162 (342)
T cd07879          92 FQDFYLVMPYMQT-DLQKIM-----GHPLSEDKVQYLVYQMLCGLKYIHSAG---IIHRDLKPGNLAVNEDCELKILDFG  162 (342)
T ss_pred             CceEEEEeccccc-CHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCC
Confidence              45899999864 565544     124788999999999999999999988   9999999999999999999999999


Q ss_pred             cccccCCCccccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhc--cC
Q 003786          623 MARIFGGDELQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLW--KD  699 (795)
Q Consensus       623 la~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~--~~  699 (795)
                      +++.....     .....+++.|+|||.+.+ ..++.++|||||||++|||++|+.||...+....  ........  ..
T Consensus       163 ~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~  235 (342)
T cd07879         163 LARHADAE-----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ--LTQILKVTGVPG  235 (342)
T ss_pred             CCcCCCCC-----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHhcCCCC
Confidence            98754321     223467889999998876 4689999999999999999999999975432111  10000000  00


Q ss_pred             cccccccC-----------ccc-cchh---hHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          700 DRAWELID-----------PTL-QNEA---SYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       700 ~~~~~~id-----------~~l-~~~~---~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ....+.+.           +.. ....   .+.....+.+++.+||+.||++||++.+++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h  297 (342)
T cd07879         236 PEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEH  297 (342)
T ss_pred             HHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            00000000           000 0000   11233567899999999999999999999976

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=100.00  E-value=2e-32  Score=292.15  Aligned_cols=255  Identities=24%  Similarity=0.289  Sum_probs=198.1

Q ss_pred             CCccccccCcCCcccEEEeEe----cCcceEEEEEecccC----ccchHHHHHHHHHHHhc-CCcccceeeeeeeeccee
Q 003786          476 NFSTENKLGEGGFGPVYKGRL----LNGQEVAVKRLSSQS----GQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEEK  546 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~  546 (795)
                      +|++.+.||+|++|.||+++.    .+++.||||++.+..    ....+.+.+|++++.++ +||||+++++.+......
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~   80 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL   80 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence            478889999999999999974    246789999986432    22345688999999999 599999999999999999


Q ss_pred             eEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          547 ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                      ++||||+++++|..++..   ...+++..+..++.|++++|.|||+.+   ++||||||+||+++.++.++|+|||+++.
T Consensus        81 ~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~~~---~~H~dl~p~nil~~~~~~~~l~dfg~~~~  154 (288)
T cd05583          81 HLILDYVNGGELFTHLYQ---REHFTESEVRVYIAEIVLALDHLHQLG---IIYRDIKLENILLDSEGHVVLTDFGLSKE  154 (288)
T ss_pred             EEEEecCCCCcHHHHHhh---cCCcCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEEECccccc
Confidence            999999999999988843   345788899999999999999999987   99999999999999999999999999886


Q ss_pred             cCCCcccccccccccccccccccccccCC--CCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCccccc
Q 003786          627 FGGDELQSKTKRIVGTYGYMSPEYAQQGL--FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWE  704 (795)
Q Consensus       627 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~--~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  704 (795)
                      +..... .......|+..|+|||.+.+..  ++.++||||||+++|||++|..|+......... ..........     
T Consensus       155 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~-~~~~~~~~~~-----  227 (288)
T cd05583         155 FLAEEE-ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQ-SEISRRILKS-----  227 (288)
T ss_pred             cccccc-cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchH-HHHHHHHHcc-----
Confidence            543321 1122346889999999987654  789999999999999999999998643221110 0000000000     


Q ss_pred             ccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          705 LIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       705 ~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                        .+    ..+......+.+++.+||+.+|++|||+.++.+.|..
T Consensus       228 --~~----~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~  266 (288)
T cd05583         228 --KP----PFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH  266 (288)
T ss_pred             --CC----CCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence              00    1112233467789999999999999999888777655

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=100.00  E-value=7.2e-33  Score=298.70  Aligned_cols=265  Identities=25%  Similarity=0.320  Sum_probs=194.4

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCcc--chHHHHHHHHHHHhcCCcccceeeeeeeecc------
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQ--GQEEFKNEIKLIAKLQHRNLVRLLGCCIELE------  544 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------  544 (795)
                      .++|++.++||+|+||.||+|+.. +++.+|||++......  ....+.+|++++++++||||+++++++.+..      
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence            578999999999999999999865 5889999988654322  2346788999999999999999999876543      


Q ss_pred             --eeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccc
Q 003786          545 --EKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFG  622 (795)
Q Consensus       545 --~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFG  622 (795)
                        ..++|+||+.+ ++...+..  ....+++..+..++.||++||.|||+++   |+|+||||+||++++++.+||+|||
T Consensus        87 ~~~~~lv~~~~~~-~l~~~~~~--~~~~~~~~~~~~i~~~l~~al~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg  160 (311)
T cd07866          87 RGSVYMVTPYMDH-DLSGLLEN--PSVKLTESQIKCYMLQLLEGINYLHENH---ILHRDIKAANILIDNQGILKIADFG  160 (311)
T ss_pred             CceEEEEEecCCc-CHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECcCc
Confidence              45899999976 45555532  2345899999999999999999999998   9999999999999999999999999


Q ss_pred             cccccCCCccc---------cccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHh
Q 003786          623 MARIFGGDELQ---------SKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGH  692 (795)
Q Consensus       623 la~~~~~~~~~---------~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~  692 (795)
                      ++.........         .......+++.|+|||.+.+ ..++.++|||||||++|||++|++|+........  ...
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~--~~~  238 (311)
T cd07866         161 LARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQ--LHL  238 (311)
T ss_pred             cchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHH--HHH
Confidence            99865432211         11123457888999998765 4689999999999999999999999865443221  111


Q ss_pred             HhhhccCc---------cccc----ccCccccc---hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          693 AWDLWKDD---------RAWE----LIDPTLQN---EASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       693 ~~~~~~~~---------~~~~----~id~~l~~---~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ........         ....    ........   .........+.+++.+||+.+|++|||+.|++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~  308 (311)
T cd07866         239 IFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH  308 (311)
T ss_pred             HHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence            11100000         0000    00000000   0111223567899999999999999999999864

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=100.00  E-value=1.3e-32  Score=294.99  Aligned_cols=253  Identities=25%  Similarity=0.383  Sum_probs=193.5

Q ss_pred             ccCCccccccCcCCcccEEEeEecC-cceEEEEEecccCc-cchHHHHHHHHHHHhcC-CcccceeeeeeeecceeeEEe
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQ-HRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~  550 (795)
                      .++|++.+.||+|+||.||+|+... ++.||||++..... ....++..|+.++.++. ||||+++++++.+....++||
T Consensus        14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~   93 (296)
T cd06618          14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM   93 (296)
T ss_pred             cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence            4678999999999999999999764 88999999865432 23455677887777775 999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhc-CCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY-SRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      ||+.+ ++..++...  ...+++..+..++.||++||+|||+. +   |+||||+|+||++++++.+||+|||++..+..
T Consensus        94 e~~~~-~l~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~~~---i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~  167 (296)
T cd06618          94 ELMST-CLDKLLKRI--QGPIPEDILGKMTVAIVKALHYLKEKHG---VIHRDVKPSNILLDASGNVKLCDFGISGRLVD  167 (296)
T ss_pred             eccCc-CHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhhCC---EecCCCcHHHEEEcCCCCEEECccccchhccC
Confidence            99864 666665332  23688899999999999999999974 5   99999999999999999999999999876543


Q ss_pred             CcccccccccccccccccccccccC----CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccc
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQG----LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWEL  705 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~~----~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  705 (795)
                      ...   .....++..|+|||.+...    .++.++||||||+++|+|++|+.|+........ ....   ..... ... 
T Consensus       168 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~---~~~~~-~~~-  238 (296)
T cd06618         168 SKA---KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFE-VLTK---ILQEE-PPS-  238 (296)
T ss_pred             CCc---ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHH-HHHH---HhcCC-CCC-
Confidence            221   1223578899999988654    388999999999999999999999864322111 1111   11111 000 


Q ss_pred             cCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          706 IDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       706 id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                          +.  .......++.+++.+||+.+|++||++.+++++.
T Consensus       239 ----~~--~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~  274 (296)
T cd06618         239 ----LP--PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHP  274 (296)
T ss_pred             ----CC--CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCh
Confidence                00  0012345688999999999999999999999863

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-32  Score=292.00  Aligned_cols=262  Identities=24%  Similarity=0.284  Sum_probs=196.2

Q ss_pred             CccccccCcCCcccEEEeEec-CcceEEEEEecccCc-cchHHHHHHHHHHHhcC-CcccceeeeeeeecceeeEEeecC
Q 003786          477 FSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQ-HRNLVRLLGCCIELEEKILIYEYM  553 (795)
Q Consensus       477 ~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~E~~  553 (795)
                      |++.+.||+|++|.||+|+.. +++.|+||++..... .......+|+..+++++ ||||+++++++.+.+..++||||+
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   80 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM   80 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence            677889999999999999975 478899999865432 22334567999999999 999999999999999999999999


Q ss_pred             CCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccc
Q 003786          554 PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ  633 (795)
Q Consensus       554 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~  633 (795)
                       +++|.+++.... ...+++..+..++.|++.+|.|||+.+   ++|+||+|+||+++.++.++|+|||++.......  
T Consensus        81 -~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~--  153 (283)
T cd07830          81 -EGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIHKHG---FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP--  153 (283)
T ss_pred             -CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCCEEEeecccceeccCCC--
Confidence             778887774432 245889999999999999999999988   9999999999999999999999999998654322  


Q ss_pred             ccccccccccccccccccc-cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhH------hhhcc-----Ccc
Q 003786          634 SKTKRIVGTYGYMSPEYAQ-QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHA------WDLWK-----DDR  701 (795)
Q Consensus       634 ~~~~~~~gt~~y~APE~~~-~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~------~~~~~-----~~~  701 (795)
                       ......++..|+|||.+. ...++.++|+||||++++||++|+.|+..............      ...+.     ...
T Consensus       154 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (283)
T cd07830         154 -PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASK  232 (283)
T ss_pred             -CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcc
Confidence             122346788999999875 45689999999999999999999998865543221100000      00000     000


Q ss_pred             cccccCcccc---chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          702 AWELIDPTLQ---NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       702 ~~~~id~~l~---~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ....+.....   ..........+.+++.+||+.+|++||+++|++.+
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~  280 (283)
T cd07830         233 LGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH  280 (283)
T ss_pred             ccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence            0000000000   00111124678899999999999999999999874

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.5e-32  Score=299.17  Aligned_cols=262  Identities=25%  Similarity=0.289  Sum_probs=200.9

Q ss_pred             CCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecc-----eee
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELE-----EKI  547 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~  547 (795)
                      +|++.+.||+|++|.||+|+.. +++.+|||++....  ....+.+.+|+.+++.++||||+++++++....     ..+
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY   80 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence            5888999999999999999875 48899999987643  344567899999999999999999999988775     789


Q ss_pred             EEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccccc
Q 003786          548 LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF  627 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~  627 (795)
                      +||||+++ +|..++..   ...+++..+..++.||++||.|||+.+   |+||||||+||+++.++.++|+|||++...
T Consensus        81 lv~e~~~~-~l~~~l~~---~~~l~~~~~~~i~~~l~~~l~~LH~~g---i~H~dlkp~nili~~~~~~~L~dfg~~~~~  153 (330)
T cd07834          81 IVTELMET-DLHKVIKS---PQPLTDDHIQYFLYQILRGLKYLHSAN---VIHRDLKPSNILVNSNCDLKICDFGLARGV  153 (330)
T ss_pred             EEecchhh-hHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccCceEee
Confidence            99999984 78777743   236889999999999999999999988   999999999999999999999999999876


Q ss_pred             CCCcc-cccccccccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhcc-------
Q 003786          628 GGDEL-QSKTKRIVGTYGYMSPEYAQQG-LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWK-------  698 (795)
Q Consensus       628 ~~~~~-~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~-------  698 (795)
                      ..... ........++..|+|||.+.+. .++.++|+||||+++|+|++|+.||........  .........       
T Consensus       154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~--~~~i~~~~~~~~~~~~  231 (330)
T cd07834         154 DPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQ--LNLIVEVLGTPSEEDL  231 (330)
T ss_pred             cccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHH--HHHHHHhcCCCChhHh
Confidence            44321 0112334678899999999887 899999999999999999999999875542211  000000000       


Q ss_pred             ----CcccccccC---ccc---cchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          699 ----DDRAWELID---PTL---QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       699 ----~~~~~~~id---~~l---~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                          .......+.   ...   ...........+.+++.+||+.+|++||++.+++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  289 (330)
T cd07834         232 KFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH  289 (330)
T ss_pred             hhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence                000000000   000   000111234577899999999999999999999986

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.9e-32  Score=300.15  Aligned_cols=269  Identities=22%  Similarity=0.239  Sum_probs=199.1

Q ss_pred             cHHhHHHHccCCccccccCcCCcccEEEeEe-cCcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeee
Q 003786          466 SLASVSAATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIE  542 (795)
Q Consensus       466 ~~~~i~~~~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~  542 (795)
                      ...++....++|++.+.||+|+||.||+|.. .+++.||+|++....  ....+.+.+|+.++++++||||+++++++..
T Consensus         8 ~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~   87 (345)
T cd07877           8 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP   87 (345)
T ss_pred             HHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeee
Confidence            3456677789999999999999999999985 468899999986532  2234668889999999999999999998764


Q ss_pred             c------ceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCe
Q 003786          543 L------EEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNP  616 (795)
Q Consensus       543 ~------~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~v  616 (795)
                      .      ...++++|++ +++|..++..    ..+++..+..++.||++||+|||+.+   |+||||||+||+++.++.+
T Consensus        88 ~~~~~~~~~~~lv~~~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~  159 (345)
T cd07877          88 ARSLEEFNDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCEL  159 (345)
T ss_pred             cccccccccEEEEehhc-ccCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEcCCCCE
Confidence            3      3357777776 7788877632    34788999999999999999999988   9999999999999999999


Q ss_pred             eeeccccccccCCCccccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhh
Q 003786          617 KISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWD  695 (795)
Q Consensus       617 kL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~  695 (795)
                      ||+|||++.....     ......++..|+|||.+.+ ..++.++|||||||++|+|++|+.|+................
T Consensus       160 kl~dfg~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~  234 (345)
T cd07877         160 KILDFGLARHTDD-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV  234 (345)
T ss_pred             EEecccccccccc-----cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence            9999999875432     1233567899999998866 578999999999999999999999986543211100000000


Q ss_pred             hccCcccccccCcc-----------c-cc---hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          696 LWKDDRAWELIDPT-----------L-QN---EASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       696 ~~~~~~~~~~id~~-----------l-~~---~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                      ..........+...           . ..   .........+.+++..||+.+|.+||++.+++++-
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~  301 (345)
T cd07877         235 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA  301 (345)
T ss_pred             CCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcCh
Confidence            00000000000000           0 00   00001234678999999999999999999999874

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=100.00  E-value=9.4e-33  Score=302.29  Aligned_cols=265  Identities=22%  Similarity=0.252  Sum_probs=194.6

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeec---------
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL---------  543 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~---------  543 (795)
                      ..+|++.+.||.|+||.||+|+.. +++.||+|++........+.+.+|++++++++||||+++++++...         
T Consensus         4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   83 (342)
T cd07854           4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG   83 (342)
T ss_pred             CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence            368999999999999999999864 5889999998766556667889999999999999999999876543         


Q ss_pred             -----ceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECC-CCCee
Q 003786          544 -----EEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDK-DMNPK  617 (795)
Q Consensus       544 -----~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~-~~~vk  617 (795)
                           ...++||||++ ++|..++.    ...+++..+..++.||+.||.|||+.+   |+||||||+||+++. ++.+|
T Consensus        84 ~~~~~~~~~lv~e~~~-~~L~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivH~dikp~Nili~~~~~~~k  155 (342)
T cd07854          84 SLTELNSVYIVQEYME-TDLANVLE----QGPLSEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANVFINTEDLVLK  155 (342)
T ss_pred             cccccceEEEEeeccc-ccHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCceEE
Confidence                 35789999997 47877663    234788999999999999999999988   999999999999974 56789


Q ss_pred             eeccccccccCCCccc-cccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHh-
Q 003786          618 ISDFGMARIFGGDELQ-SKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAW-  694 (795)
Q Consensus       618 L~DFGla~~~~~~~~~-~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~-  694 (795)
                      |+|||++......... .......++..|+|||.+.. ..++.++|||||||++|+|++|+.||............... 
T Consensus       156 l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~  235 (342)
T cd07854         156 IGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESV  235 (342)
T ss_pred             ECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc
Confidence            9999999765322111 11122357889999997654 56889999999999999999999999654321111000000 


Q ss_pred             hhccC---cccc----cccC-cc--cc---chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          695 DLWKD---DRAW----ELID-PT--LQ---NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       695 ~~~~~---~~~~----~~id-~~--l~---~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .....   ....    ..+. ..  ..   .........++.+++.+||+.+|++|||+.|++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  300 (342)
T cd07854         236 PVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH  300 (342)
T ss_pred             CCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence            00000   0000    0000 00  00   00111234567899999999999999999999975

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.7e-32  Score=300.26  Aligned_cols=265  Identities=22%  Similarity=0.279  Sum_probs=197.5

Q ss_pred             hHHHHccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecc-
Q 003786          469 SVSAATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELE-  544 (795)
Q Consensus       469 ~i~~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-  544 (795)
                      ++....++|++.+.||+|+||.||++... +++.||||++....  ....+.+.+|+++|++++||||+++++++.... 
T Consensus         9 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   88 (343)
T cd07880           9 TIWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLS   88 (343)
T ss_pred             hhhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcc
Confidence            34455678999999999999999999754 68899999985432  223456889999999999999999999987654 


Q ss_pred             -----eeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeee
Q 003786          545 -----EKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKIS  619 (795)
Q Consensus       545 -----~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~  619 (795)
                           ..++||||+ +++|..++..    ..+++..+..++.||++||+|||+.+   |+||||||+||+++.++.+||+
T Consensus        89 ~~~~~~~~lv~e~~-~~~l~~~~~~----~~l~~~~~~~i~~qi~~al~~LH~~g---i~H~dlkp~Nill~~~~~~kl~  160 (343)
T cd07880          89 LDRFHDFYLVMPFM-GTDLGKLMKH----EKLSEDRIQFLVYQMLKGLKYIHAAG---IIHRDLKPGNLAVNEDCELKIL  160 (343)
T ss_pred             ccccceEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEe
Confidence                 358999998 6788877732    35889999999999999999999988   9999999999999999999999


Q ss_pred             ccccccccCCCccccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhH-----
Q 003786          620 DFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHA-----  693 (795)
Q Consensus       620 DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~-----  693 (795)
                      |||++......     .....+++.|+|||.+.+ ..++.++|+|||||++|+|++|+.||..............     
T Consensus       161 dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~  235 (343)
T cd07880         161 DFGLARQTDSE-----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTP  235 (343)
T ss_pred             ecccccccccC-----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence            99999865322     223467889999998876 4688999999999999999999999865432111000000     


Q ss_pred             ----hhhccCcccccccC--cccc----chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          694 ----WDLWKDDRAWELID--PTLQ----NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       694 ----~~~~~~~~~~~~id--~~l~----~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                          ............+.  +...    ..........+.+++.+||+.+|++|||+.+++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~  298 (343)
T cd07880         236 SKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH  298 (343)
T ss_pred             CHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence                00000000000000  0000    01112234467899999999999999999999975

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-33  Score=296.47  Aligned_cols=270  Identities=22%  Similarity=0.265  Sum_probs=217.2

Q ss_pred             HHccCCccccccCcCCcccEEEeEecCcc-eEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceee
Q 003786          472 AATANFSTENKLGEGGFGPVYKGRLLNGQ-EVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKI  547 (795)
Q Consensus       472 ~~~~~~~~~~~LG~G~~g~Vy~~~~~~~~-~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  547 (795)
                      ....+++.+..||-||||.|=+++..... .+|+|++++..   ...++.+..|-.||...+.|.||++|..|.+....|
T Consensus       417 v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvY  496 (732)
T KOG0614|consen  417 VKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVY  496 (732)
T ss_pred             cchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhh
Confidence            34567888899999999999999865433 48999887653   344567889999999999999999999999999999


Q ss_pred             EEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccccc
Q 003786          548 LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF  627 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~  627 (795)
                      ++||-|-||.|...+.   .++.++...+..++..+.+|+.|||.++   ||+|||||+|++|+.+|.+||.|||+|+.+
T Consensus       497 mLmEaClGGElWTiLr---dRg~Fdd~tarF~~acv~EAfeYLH~k~---iIYRDLKPENllLd~~Gy~KLVDFGFAKki  570 (732)
T KOG0614|consen  497 MLMEACLGGELWTILR---DRGSFDDYTARFYVACVLEAFEYLHRKG---IIYRDLKPENLLLDNRGYLKLVDFGFAKKI  570 (732)
T ss_pred             hhHHhhcCchhhhhhh---hcCCcccchhhhhHHHHHHHHHHHHhcC---ceeccCChhheeeccCCceEEeehhhHHHh
Confidence            9999999999999994   4566899999999999999999999998   999999999999999999999999999987


Q ss_pred             CCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccC
Q 003786          628 GGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID  707 (795)
Q Consensus       628 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id  707 (795)
                      ....   .+-+++|||+|.|||++.++.++.++|.||||+++|||++|.+||...+.-...-+     .++.....    
T Consensus       571 ~~g~---KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~-----ILkGid~i----  638 (732)
T KOG0614|consen  571 GSGR---KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNL-----ILKGIDKI----  638 (732)
T ss_pred             ccCC---ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHH-----HHhhhhhh----
Confidence            6543   56679999999999999999999999999999999999999999976553222111     11111111    


Q ss_pred             ccccchhhHHHHHHHHHHHHhhccCCCCCCCC-----HHHHHHHH--cc------ccCCCCCCCCCCccc
Q 003786          708 PTLQNEASYLILNRYINVGLLCVQEDAADRPT-----MFEVVSML--TN------KTINLPHPRQPAFSS  764 (795)
Q Consensus       708 ~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt-----~~evl~~L--~~------~~~~l~~p~~p~~~~  764 (795)
                           ..+........++|.+....+|.+|.-     +.+|.+|-  ++      ....+|+|.+|....
T Consensus       639 -----~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdweglr~~~L~pPi~~~va~  703 (732)
T KOG0614|consen  639 -----EFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDWEGLRSRTLPPPIIPSVAN  703 (732)
T ss_pred             -----hcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCChhhhhhccCCCCccccCCC
Confidence                 123334456678888899999999976     67777763  22      123467777765543

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=100.00  E-value=2.9e-32  Score=294.65  Aligned_cols=244  Identities=30%  Similarity=0.410  Sum_probs=191.2

Q ss_pred             CccccccCcCCcccEEEeEec-CcceEEEEEecccCcc---chHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          477 FSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQ---GQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       477 ~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      |...++||+|+||.||+|+.. +++.|++|++......   ..+.+.+|++++++++|||++++++++.+....++||||
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  102 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY  102 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence            666788999999999999864 5889999998654322   235678899999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      +.+ ++.+++..  ....+++..+..++.||+.||.|||+.+   |+|+||+|+||+++.++.+||+|||++....    
T Consensus       103 ~~~-~l~~~l~~--~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dl~p~nili~~~~~~kL~dfg~~~~~~----  172 (313)
T cd06633         103 CLG-SASDLLEV--HKKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASKSS----  172 (313)
T ss_pred             CCC-CHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChhhEEECCCCCEEEeecCCCcccC----
Confidence            975 56555532  2345888999999999999999999988   9999999999999999999999999986432    


Q ss_pred             cccccccccccccccccccc---cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcc
Q 003786          633 QSKTKRIVGTYGYMSPEYAQ---QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT  709 (795)
Q Consensus       633 ~~~~~~~~gt~~y~APE~~~---~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~  709 (795)
                        ......|+..|+|||++.   ...++.++|||||||++|+|++|..|+........  ...   .... .....    
T Consensus       173 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~--~~~---~~~~-~~~~~----  240 (313)
T cd06633         173 --PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA--LYH---IAQN-DSPTL----  240 (313)
T ss_pred             --CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH--HHH---HHhc-CCCCC----
Confidence              122356889999999874   45688999999999999999999999754332111  110   0000 00000    


Q ss_pred             ccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          710 LQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       710 l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                          ........+.+++.+||+.+|.+||++.+++++
T Consensus       241 ----~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~  273 (313)
T cd06633         241 ----QSNEWTDSFRGFVDYCLQKIPQERPASAELLRH  273 (313)
T ss_pred             ----CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                111223457789999999999999999999975

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=100.00  E-value=2.9e-32  Score=296.51  Aligned_cols=263  Identities=24%  Similarity=0.306  Sum_probs=196.9

Q ss_pred             HHHccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeee-ccee
Q 003786          471 SAATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIE-LEEK  546 (795)
Q Consensus       471 ~~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~  546 (795)
                      ...+++|++.+.||+|+||.||+++.. +++.||||++.+..  ....+.+.+|++++++++||||+++++++.. ....
T Consensus         6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~   85 (328)
T cd07856           6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDI   85 (328)
T ss_pred             eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcE
Confidence            345688999999999999999999855 68999999886432  2334678899999999999999999999875 5678


Q ss_pred             eEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          547 ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                      ++++||+ +++|..++.    ...+++..+..++.||++||.|||+.+   |+||||+|+||+++.++.+||+|||++..
T Consensus        86 ~lv~e~~-~~~L~~~~~----~~~~~~~~~~~~~~ql~~aL~~LH~~~---iiH~dl~p~Nili~~~~~~~l~dfg~~~~  157 (328)
T cd07856          86 YFVTELL-GTDLHRLLT----SRPLEKQFIQYFLYQILRGLKYVHSAG---VVHRDLKPSNILINENCDLKICDFGLARI  157 (328)
T ss_pred             EEEeehh-ccCHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEeECCCCCEEeCccccccc
Confidence            8999998 457877763    234678888899999999999999988   99999999999999999999999999875


Q ss_pred             cCCCccccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhH-hHh--------Hhhh
Q 003786          627 FGGDELQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTL-LGH--------AWDL  696 (795)
Q Consensus       627 ~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~-~~~--------~~~~  696 (795)
                      ....     .....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||.......... ...        ....
T Consensus       158 ~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (328)
T cd07856         158 QDPQ-----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINT  232 (328)
T ss_pred             cCCC-----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence            4321     123467889999998765 578999999999999999999999986543211100 000        0000


Q ss_pred             ccCcccccccCc-cccch-----hhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          697 WKDDRAWELIDP-TLQNE-----ASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       697 ~~~~~~~~~id~-~l~~~-----~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .......+++.. .....     ........+.++|.+||+.+|++||++.+++.+
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~  288 (328)
T cd07856         233 ICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH  288 (328)
T ss_pred             ccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            000000000000 00000     111234678899999999999999999999886

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=4.3e-32  Score=288.21  Aligned_cols=262  Identities=26%  Similarity=0.347  Sum_probs=198.7

Q ss_pred             CccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecC
Q 003786          477 FSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYM  553 (795)
Q Consensus       477 ~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  553 (795)
                      |+..+.||+|++|.||+|+.. +++.+|+|++....  ....+.+.+|+.++++++|+||+++++++.+....++|+||+
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   80 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC   80 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence            566789999999999999875 48999999997653  333467889999999999999999999999999999999999


Q ss_pred             CCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccc
Q 003786          554 PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ  633 (795)
Q Consensus       554 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~  633 (795)
                      + ++|.+++....  ..+++..+..++.|+++||+|||+.+   |+||||+|+||++++++.+||+|||++........ 
T Consensus        81 ~-~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~-  153 (282)
T cd07829          81 D-MDLKKYLDKRP--GPLSPNLIKSIMYQLLRGLAYCHSHR---ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR-  153 (282)
T ss_pred             C-cCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChheEEEcCCCCEEEecCCcccccCCCcc-
Confidence            8 48988885432  35889999999999999999999988   99999999999999999999999999987643221 


Q ss_pred             ccccccccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchh--HhH-------hHhhhccCcccc
Q 003786          634 SKTKRIVGTYGYMSPEYAQQG-LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLT--LLG-------HAWDLWKDDRAW  703 (795)
Q Consensus       634 ~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~--~~~-------~~~~~~~~~~~~  703 (795)
                       ......++..|+|||.+.+. .++.++|||||||+++||++|+.|+.........  ...       ..|..+......
T Consensus       154 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (282)
T cd07829         154 -TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDY  232 (282)
T ss_pred             -ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccc
Confidence             12234467889999988766 8899999999999999999999888654321110  000       000000000000


Q ss_pred             cccCccc----cchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          704 ELIDPTL----QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       704 ~~id~~l----~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ...-+..    .....+.....+.+++.+||+.+|++||++.+++.+
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~  279 (282)
T cd07829         233 KPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH  279 (282)
T ss_pred             cccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence            0000000    001111225578899999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.98  E-value=3.7e-32  Score=285.47  Aligned_cols=250  Identities=26%  Similarity=0.363  Sum_probs=195.0

Q ss_pred             CCccccccCcCCcccEEEeEecC-cceEEEEEeccc-----CccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          476 NFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQ-----SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~~-~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      +|.+.++||+|+||.||+++... +..+++|++...     .......+..|+.++++++||||+++++++.+....++|
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII   80 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence            58888999999999999998643 455666655431     122334577899999999999999999999999999999


Q ss_pred             eecCCCCChhhhhhcc-CCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccC
Q 003786          550 YEYMPNKSLDFFLFDS-TKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      +||+++++|..++... .....+++..+..++.|+++||.|||+.+   ++|+||||+||+++. +.+||+|||++....
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~~l~~~nili~~-~~~~l~d~g~~~~~~  156 (260)
T cd08222          81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR---ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM  156 (260)
T ss_pred             EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC---ccccCCChhheEeec-CCEeecccCceeecC
Confidence            9999999999888542 23356899999999999999999999988   999999999999975 569999999988654


Q ss_pred             CCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCc
Q 003786          629 GDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP  708 (795)
Q Consensus       629 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~  708 (795)
                      ...  .......|++.|+|||.+.+..++.++|+||||+++++|++|..|+.....  .....   .. ....     . 
T Consensus       157 ~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~--~~~~~---~~-~~~~-----~-  222 (260)
T cd08222         157 GSC--DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF--LSVVL---RI-VEGP-----T-  222 (260)
T ss_pred             CCc--ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccH--HHHHH---HH-HcCC-----C-
Confidence            322  122335688899999999888899999999999999999999999854321  11110   00 0010     0 


Q ss_pred             cccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          709 TLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       709 ~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                         ...+......+.+++.+||+.+|++||++.|++++
T Consensus       223 ---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  257 (260)
T cd08222         223 ---PSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN  257 (260)
T ss_pred             ---CCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence               11123345578889999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.98  E-value=2.7e-32  Score=294.19  Aligned_cols=249  Identities=31%  Similarity=0.410  Sum_probs=194.3

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      ..|+..+.||+|+||.||+|+.. +++.+|+|.+....   .....++.+|+++++.++|+|++++++++......++||
T Consensus        15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   94 (308)
T cd06634          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM   94 (308)
T ss_pred             HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence            44777889999999999999865 57889999886432   223456788999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      ||+. +++.+.+...  ...+++..+..++.|++.||.|||+.+   ++||||||+||+++.++.+||+|||++......
T Consensus        95 e~~~-~~l~~~~~~~--~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~  168 (308)
T cd06634          95 EYCL-GSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA  168 (308)
T ss_pred             EccC-CCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHhEEECCCCcEEECCcccceeecCc
Confidence            9997 5676665322  234788899999999999999999987   999999999999999999999999998765322


Q ss_pred             cccccccccccccccccccccc---cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccC
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQ---QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID  707 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~---~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id  707 (795)
                            ....+++.|+|||.+.   ...++.++|||||||++|+|++|..|+........  ....    .....     
T Consensus       169 ------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~--~~~~----~~~~~-----  231 (308)
T cd06634         169 ------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA--LYHI----AQNES-----  231 (308)
T ss_pred             ------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHH--HHHH----hhcCC-----
Confidence                  2346889999999874   35688999999999999999999998754321111  1000    00000     


Q ss_pred             ccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          708 PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       708 ~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      +.   .........+.++|.+||+.+|++||++.+++++.-.
T Consensus       232 ~~---~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~  270 (308)
T cd06634         232 PA---LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV  270 (308)
T ss_pred             CC---cCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccc
Confidence            00   0112344567889999999999999999999987433

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.98  E-value=9.7e-33  Score=273.09  Aligned_cols=254  Identities=19%  Similarity=0.213  Sum_probs=198.0

Q ss_pred             HccCCcc-ccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhc-CCcccceeeeeeeec----ce
Q 003786          473 ATANFST-ENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIEL----EE  545 (795)
Q Consensus       473 ~~~~~~~-~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~----~~  545 (795)
                      .+++|++ .++||-|-.|+|..+.++ +++++|+|++.     +....++|++.--.. .|||||.+++++...    .-
T Consensus        59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~-----Ds~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc  133 (400)
T KOG0604|consen   59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLL-----DSPKARREVELHWMASGHPHIVSIIDVYENSYQGRKC  133 (400)
T ss_pred             chhhheehhhhhccccCCceEEEEeccchhhhHHHHHh-----cCHHHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence            4566765 367999999999999764 68999999984     345678899886544 699999999987643    34


Q ss_pred             eeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECC---CCCeeeeccc
Q 003786          546 KILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDK---DMNPKISDFG  622 (795)
Q Consensus       546 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~---~~~vkL~DFG  622 (795)
                      +.+|||.|+||.|...+.+. ....+.+.++..|+.||+.|+.|||+.+   |.||||||+|+|...   +-.+||+|||
T Consensus       134 LLiVmE~meGGeLfsriq~~-g~~afTErea~eI~~qI~~Av~~lH~~n---IAHRDlKpENLLyt~t~~na~lKLtDfG  209 (400)
T KOG0604|consen  134 LLIVMECMEGGELFSRIQDR-GDQAFTEREASEIMKQIGLAVRYLHSMN---IAHRDLKPENLLYTTTSPNAPLKLTDFG  209 (400)
T ss_pred             eEeeeecccchHHHHHHHHc-ccccchHHHHHHHHHHHHHHHHHHHhcc---hhhccCChhheeeecCCCCcceEecccc
Confidence            57899999999999888543 3456899999999999999999999998   999999999999964   4569999999


Q ss_pred             cccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCccc
Q 003786          623 MARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRA  702 (795)
Q Consensus       623 la~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~  702 (795)
                      +|+.....   ....+.+-||.|.|||++....|+..+|+||+||++|-|++|.+||-......+..-.  ......+. 
T Consensus       210 FAK~t~~~---~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgM--k~rI~~gq-  283 (400)
T KOG0604|consen  210 FAKETQEP---GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM--KRRIRTGQ-  283 (400)
T ss_pred             cccccCCC---ccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhH--HhHhhccC-
Confidence            99975422   2334567899999999999999999999999999999999999998543322221100  00001110 


Q ss_pred             ccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          703 WELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       703 ~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      +     .+.++.....++...++|..+|..+|.+|.|+.+++.+
T Consensus       284 y-----~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h  322 (400)
T KOG0604|consen  284 Y-----EFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH  322 (400)
T ss_pred             c-----cCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence            0     11233445566778899999999999999999999985

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.98  E-value=2e-32  Score=299.88  Aligned_cols=260  Identities=25%  Similarity=0.305  Sum_probs=197.4

Q ss_pred             HHccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecce---
Q 003786          472 AATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEE---  545 (795)
Q Consensus       472 ~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---  545 (795)
                      ...++|++.+.||+|++|.||+|+.. +++.||||++....  ....+.+.+|+.++++++||||+++++++...+.   
T Consensus        12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   91 (343)
T cd07851          12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED   91 (343)
T ss_pred             cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence            34678999999999999999999875 57899999986432  2234567789999999999999999998876654   


Q ss_pred             ---eeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccc
Q 003786          546 ---KILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFG  622 (795)
Q Consensus       546 ---~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFG  622 (795)
                         .++|+||+ +++|.+++..    ..+++..+..++.||++||.|||+.+   |+||||||+||+++.++.+||+|||
T Consensus        92 ~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nill~~~~~~kL~dfg  163 (343)
T cd07851          92 FQDVYLVTHLM-GADLNNIVKC----QKLSDDHIQFLVYQILRGLKYIHSAG---IIHRDLKPSNIAVNEDCELKILDFG  163 (343)
T ss_pred             cccEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEcccc
Confidence               89999998 5688887743    35889999999999999999999988   9999999999999999999999999


Q ss_pred             cccccCCCccccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhcc---
Q 003786          623 MARIFGGDELQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWK---  698 (795)
Q Consensus       623 la~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~---  698 (795)
                      ++......     .....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||........  +........   
T Consensus       164 ~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~--~~~i~~~~~~~~  236 (343)
T cd07851         164 LARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQ--LKRIMNLVGTPD  236 (343)
T ss_pred             cccccccc-----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHHhcCCCC
Confidence            99865322     233467889999998865 4688999999999999999999999865432111  110000000   


Q ss_pred             --------CcccccccC---ccccc---hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          699 --------DDRAWELID---PTLQN---EASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       699 --------~~~~~~~id---~~l~~---~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                              .......+.   .....   .........+.+++.+||+.+|++|||+.||+++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h  298 (343)
T cd07851         237 EELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH  298 (343)
T ss_pred             HHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence                    000000000   00000   0111235678899999999999999999999885

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.98  E-value=5.3e-32  Score=295.19  Aligned_cols=264  Identities=24%  Similarity=0.258  Sum_probs=191.5

Q ss_pred             CCccccccCcCCcccEEEeEec-C--cceEEEEEecccC--ccchHHHHHHHHHHHhc-CCcccceeeeeeeec----ce
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL-N--GQEVAVKRLSSQS--GQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIEL----EE  545 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~-~--~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~----~~  545 (795)
                      +|++.+.||+|+||.||+++.. .  ++.||+|++....  ....+.+.+|+.+++++ +||||+++++++...    ..
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~   80 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE   80 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence            4788899999999999999864 3  6789999986432  22345678899999999 599999999875433    45


Q ss_pred             eeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccc
Q 003786          546 KILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR  625 (795)
Q Consensus       546 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~  625 (795)
                      .++++||+. ++|...+.   ....+++..+..++.||+.||.|||+++   |+||||||+||+++.++.+||+|||+++
T Consensus        81 ~~~~~e~~~-~~L~~~l~---~~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivH~dlkp~Nili~~~~~~kl~Dfg~a~  153 (332)
T cd07857          81 LYLYEELME-ADLHQIIR---SGQPLTDAHFQSFIYQILCGLKYIHSAN---VLHRDLKPGNLLVNADCELKICDFGLAR  153 (332)
T ss_pred             EEEEEeccc-CCHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHeEEcCCCCEEeCcCCCce
Confidence            678888886 57877773   3345889999999999999999999998   9999999999999999999999999998


Q ss_pred             ccCCCccc--cccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhH-hHh--------H
Q 003786          626 IFGGDELQ--SKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTL-LGH--------A  693 (795)
Q Consensus       626 ~~~~~~~~--~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~-~~~--------~  693 (795)
                      ........  .......|++.|+|||.+.+ ..++.++|||||||++|+|++|..||...+...... ...        .
T Consensus       154 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  233 (332)
T cd07857         154 GFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEET  233 (332)
T ss_pred             ecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence            65432211  11233578999999998765 568999999999999999999999987544211100 000        0


Q ss_pred             hhhccCcccccc------cCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          694 WDLWKDDRAWEL------IDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       694 ~~~~~~~~~~~~------id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ............      ................+.+++.+||+.+|++|||+.+++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~  292 (332)
T cd07857         234 LSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH  292 (332)
T ss_pred             HHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            000000000000      00000000111124567899999999999999999999874

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.98  E-value=3.2e-32  Score=285.13  Aligned_cols=271  Identities=27%  Similarity=0.375  Sum_probs=203.3

Q ss_pred             ccCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHh--cCCcccceeeeeeeecc----eee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAK--LQHRNLVRLLGCCIELE----EKI  547 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~~~  547 (795)
                      ....++.+.||+|.||.||+|++ +++.||||++..   +..+.+++|..|...  ++|+||++++++-....    ..+
T Consensus       209 l~pl~l~eli~~Grfg~V~KaqL-~~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eyw  284 (534)
T KOG3653|consen  209 LDPLQLLELIGRGRFGCVWKAQL-DNRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYW  284 (534)
T ss_pred             CCchhhHHHhhcCccceeehhhc-cCceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCcccccee
Confidence            45567788999999999999998 569999999964   456778888888764  58999999999876655    789


Q ss_pred             EEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcC------CCcEEeccCCCCcEEECCCCCeeeecc
Q 003786          548 LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS------RLRVIHRDLKASNILLDKDMNPKISDF  621 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------~~~iiHrDikp~NIll~~~~~vkL~DF  621 (795)
                      ||+||.+.|+|-++|.    ...++|....+++..|++||+|||+.-      ...|+|||||.+||||..|+...|+||
T Consensus       285 LVt~fh~kGsL~dyL~----~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDF  360 (534)
T KOG3653|consen  285 LVTEFHPKGSLCDYLK----ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADF  360 (534)
T ss_pred             EEeeeccCCcHHHHHH----hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecc
Confidence            9999999999999994    456899999999999999999999763      347999999999999999999999999


Q ss_pred             ccccccCCCcccccccccccccccccccccccC-CCC-----cccchhhHHHHHHHHHhCCCCCCCCC--CcchhHhHhH
Q 003786          622 GMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG-LFS-----IKSDVFSFGVLLLETLSSKRNTDFSN--TNSLTLLGHA  693 (795)
Q Consensus       622 Gla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~-----~k~DvwSlGvil~elltG~~p~~~~~--~~~~~~~~~~  693 (795)
                      |+|..+............+||.+|||||++.+. .+.     .+.||||+|.+||||++...-.....  ..+..+....
T Consensus       361 GLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~ev  440 (534)
T KOG3653|consen  361 GLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEV  440 (534)
T ss_pred             ceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHh
Confidence            999988766655556668999999999999764 232     46899999999999999765543211  1111111010


Q ss_pred             hhhccCcc-----cccccCccccch-hhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccccC
Q 003786          694 WDLWKDDR-----AWELIDPTLQNE-ASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTI  752 (795)
Q Consensus       694 ~~~~~~~~-----~~~~id~~l~~~-~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~~  752 (795)
                      ..-..-++     +.+...|.+.+. ....-..-+++.+..||..||+.|.|+.=+-+.+.....
T Consensus       441 G~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~  505 (534)
T KOG3653|consen  441 GNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMM  505 (534)
T ss_pred             cCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhc
Confidence            00000001     111112222111 111234567789999999999999999988887766433

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.98  E-value=1.8e-32  Score=273.91  Aligned_cols=278  Identities=21%  Similarity=0.310  Sum_probs=212.9

Q ss_pred             HccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhc-CCcccceeeeeeeecceee
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEEKI  547 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~  547 (795)
                      ..++|.+.++||+|+|++|.+++++ +.+.+|+|+++++.   .++..=.+.|-.+..+. +||++|-++.+|+.+..++
T Consensus       248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlf  327 (593)
T KOG0695|consen  248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLF  327 (593)
T ss_pred             ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEE
Confidence            4578999999999999999999865 58899999997753   33444566777777655 7999999999999999999


Q ss_pred             EEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccccc
Q 003786          548 LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF  627 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~  627 (795)
                      +|.||++||+|-.++   .++..++++.+..+..+|+.||.|||+.|   ||+||||.+|+|+|.+|++||+|+|+++.-
T Consensus       328 fvieyv~ggdlmfhm---qrqrklpeeharfys~ei~lal~flh~rg---iiyrdlkldnvlldaeghikltdygmcke~  401 (593)
T KOG0695|consen  328 FVIEYVNGGDLMFHM---QRQRKLPEEHARFYSAEICLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEG  401 (593)
T ss_pred             EEEEEecCcceeeeh---hhhhcCcHHHhhhhhHHHHHHHHHHhhcC---eeeeeccccceEEccCCceeecccchhhcC
Confidence            999999999996666   44556999999999999999999999998   999999999999999999999999999853


Q ss_pred             CCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCC--CcchhHhHhHhhhccCcccccc
Q 003786          628 GGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSN--TNSLTLLGHAWDLWKDDRAWEL  705 (795)
Q Consensus       628 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~  705 (795)
                      -..  -..+++++|||.|.|||++++..|...+|+|+|||+++||+.|+.||+.-.  .++.+........        +
T Consensus       402 l~~--gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqv--------i  471 (593)
T KOG0695|consen  402 LGP--GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQV--------I  471 (593)
T ss_pred             CCC--CcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHH--------H
Confidence            222  234677999999999999999999999999999999999999999997533  2222111111111        1


Q ss_pred             cCccccchhhHHHHHHHHHHHHhhccCCCCCCCC------HHHHHHHH--------ccccCCCCCCCCCCccccccc
Q 003786          706 IDPTLQNEASYLILNRYINVGLLCVQEDAADRPT------MFEVVSML--------TNKTINLPHPRQPAFSSIRGL  768 (795)
Q Consensus       706 id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt------~~evl~~L--------~~~~~~l~~p~~p~~~~~~~~  768 (795)
                      ++..++  ++....-+...++..-|..||.+|.-      ++++..+-        .-++..+.+|..|.....+++
T Consensus       472 lekqir--iprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd~leqk~v~ppf~p~i~~d~~l  546 (593)
T KOG0695|consen  472 LEKQIR--IPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWDLLEQKQVLPPFQPQITDDYGL  546 (593)
T ss_pred             hhhccc--ccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHHHHhhcccCCCCCCccccccCc
Confidence            111111  22223335567888899999999852      34444321        012445677888887776664

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.98  E-value=1.1e-32  Score=303.14  Aligned_cols=252  Identities=29%  Similarity=0.413  Sum_probs=209.0

Q ss_pred             CccccccCcCCcccEEEeEe-cCc----ceEEEEEeccc-CccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          477 FSTENKLGEGGFGPVYKGRL-LNG----QEVAVKRLSSQ-SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       477 ~~~~~~LG~G~~g~Vy~~~~-~~~----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      ....++||+|+||+||+|.+ +.|    -+||||++... ..+...++.+|+.+|.+++|||+++|+++|.... ..||+
T Consensus       698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvt  776 (1177)
T KOG1025|consen  698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVT  776 (1177)
T ss_pred             hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHH
Confidence            45578999999999999963 444    35899988654 4455688999999999999999999999998777 88999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      +||+.|+|.++++.+  +..+..+..+.+..|||+||.|||++.   ++||||..+||||.+-..+||+|||+++....+
T Consensus       777 q~mP~G~LlDyvr~h--r~~igsq~lLnw~~QIAkgM~YLe~qr---lVHrdLaaRNVLVksP~hvkitdfgla~ll~~d  851 (1177)
T KOG1025|consen  777 QLMPLGCLLDYVREH--RDNIGSQDLLNWCYQIAKGMKYLEEQR---LVHRDLAARNVLVKSPNHVKITDFGLAKLLAPD  851 (1177)
T ss_pred             HhcccchHHHHHHHh--hccccHHHHHHHHHHHHHHHHHHHhcc---hhhhhhhhhheeecCCCeEEEEecchhhccCcc
Confidence            999999999998653  345788899999999999999999887   999999999999999999999999999998776


Q ss_pred             cccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCcc
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT  709 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~  709 (795)
                      ..+.......-.+.|||-|.+....|+.++|||||||++||++| |..|++.....++.               ++++..
T Consensus       852 ~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~---------------dlle~g  916 (1177)
T KOG1025|consen  852 EKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIP---------------DLLEKG  916 (1177)
T ss_pred             cccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhh---------------HHHhcc
Confidence            65544444445678999999999999999999999999999986 88888765544332               222222


Q ss_pred             ccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          710 LQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       710 l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      .+-..++.+..++..++.+||..|+..||+++++...++.
T Consensus       917 eRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~  956 (1177)
T KOG1025|consen  917 ERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSR  956 (1177)
T ss_pred             ccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHH
Confidence            2234555677788899999999999999999999887655

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.97  E-value=2.7e-32  Score=297.08  Aligned_cols=241  Identities=23%  Similarity=0.252  Sum_probs=195.5

Q ss_pred             HccCCccccccCcCCcccEEEeEe-cCcceEEEEEecccCccchHHHHHHHHHHHhc-CCcccceeeeeeeecceeeEEe
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      .++.|++...+|.|+|+.|-.+.+ .+++..++|++.+.    ...-.+|+.++... +||||+++.+.+.+..+.++||
T Consensus       320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~----~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~  395 (612)
T KOG0603|consen  320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR----ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVM  395 (612)
T ss_pred             cchhhccccccCCCCccceeeeeccccccchhheecccc----ccccccccchhhhhcCCCcceeecceecCCceeeeee
Confidence            467888989999999999999875 46899999999765    23345677666555 7999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEE-CCCCCeeeeccccccccCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILL-DKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll-~~~~~vkL~DFGla~~~~~  629 (795)
                      |.+.++.+.+.+....   ... .++..|+.+|+.|+.|||.+|   +|||||||+|||+ +..++++|+|||.++....
T Consensus       396 e~l~g~ell~ri~~~~---~~~-~e~~~w~~~lv~Av~~LH~~g---vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~  468 (612)
T KOG0603|consen  396 ELLDGGELLRRIRSKP---EFC-SEASQWAAELVSAVDYLHEQG---VVHRDLKPGNILLDGSAGHLRLTYFGFWSELER  468 (612)
T ss_pred             hhccccHHHHHHHhcc---hhH-HHHHHHHHHHHHHHHHHHhcC---eeecCCChhheeecCCCCcEEEEEechhhhCch
Confidence            9999998877764322   222 678889999999999999998   9999999999999 6999999999999987654


Q ss_pred             CcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcc
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT  709 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~  709 (795)
                      .     ..+.+-|..|.|||++....|+.++||||||++||+|++|+.|+...... ..+..    ....          
T Consensus       469 ~-----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-~ei~~----~i~~----------  528 (612)
T KOG0603|consen  469 S-----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-IEIHT----RIQM----------  528 (612)
T ss_pred             h-----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-HHHHH----hhcC----------
Confidence            3     22345688999999999999999999999999999999999998754433 11111    1111          


Q ss_pred             ccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          710 LQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       710 l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                        ...+...+....+|+.+||+.+|.+||+|.++..+
T Consensus       529 --~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h  563 (612)
T KOG0603|consen  529 --PKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAH  563 (612)
T ss_pred             --CccccccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence              11224456678899999999999999999999885

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.97  E-value=5.4e-32  Score=301.79  Aligned_cols=262  Identities=25%  Similarity=0.397  Sum_probs=212.9

Q ss_pred             ccHHhHHHHccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhc-CCcccceeeeeeee
Q 003786          465 FSLASVSAATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIE  542 (795)
Q Consensus       465 ~~~~~i~~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~  542 (795)
                      ..+..+...++.|++.+.||.|.+|.||+++.. +++..|+|+..... ...+++..|+++|+.+ +|||++.+|+++..
T Consensus         9 ~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-d~deEiE~eynil~~~~~hpnv~~fyg~~~k   87 (953)
T KOG0587|consen    9 IDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-DEEEEIELEYNMLKKYSHHPNVATFYGAFIK   87 (953)
T ss_pred             cchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc-cccHHHHHHHHHHHhccCCCCcceEEEEEEE
Confidence            344555667788999999999999999999854 58899999986543 4567899999999888 69999999999874


Q ss_pred             -----cceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCee
Q 003786          543 -----LEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPK  617 (795)
Q Consensus       543 -----~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vk  617 (795)
                           ++.++||||||.+||..+++.... ...+.|..+..|++.++.|+++||...   ++|||||-.|||++.++.||
T Consensus        88 ~~~~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~nk---viHRDikG~NiLLT~e~~VK  163 (953)
T KOG0587|consen   88 KDPGNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHNNK---VIHRDIKGQNVLLTENAEVK  163 (953)
T ss_pred             ecCCCCCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhhcc---eeeecccCceEEEeccCcEE
Confidence                 567899999999999999986544 667999999999999999999999876   99999999999999999999


Q ss_pred             eeccccccccCCCccccccccccccccccccccccc-----CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHh
Q 003786          618 ISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQ-----GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGH  692 (795)
Q Consensus       618 L~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~-----~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~  692 (795)
                      |+|||++..+...  .....+..|||.|||||++..     ..|+..+|+||||++..||.-|.+|+........     
T Consensus       164 LvDFGvSaQldsT--~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmra-----  236 (953)
T KOG0587|consen  164 LVDFGVSAQLDST--VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRA-----  236 (953)
T ss_pred             Eeeeeeeeeeecc--cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhh-----
Confidence            9999999876433  234456789999999999854     3578899999999999999999999754332111     


Q ss_pred             HhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          693 AWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       693 ~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                         ++...+     +|...-..+..-...+.++|..||..|-++||++.++++|
T Consensus       237 ---LF~IpR-----NPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h  282 (953)
T KOG0587|consen  237 ---LFLIPR-----NPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH  282 (953)
T ss_pred             ---hccCCC-----CCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence               111111     1112222345567789999999999999999999999875

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.97  E-value=1.3e-33  Score=274.94  Aligned_cols=256  Identities=25%  Similarity=0.306  Sum_probs=195.9

Q ss_pred             CCccccccCcCCcccEEEeEec-CcceEEEEEecccCc-cchHHHHHHHHHHHhc-CCcccceeeeeeeecceeeEEeec
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      +.+-...||.|.||+|++-.++ .|+..|||+++.... ..+.++..|.+...+- +.||||++||.+..+...++.||.
T Consensus        65 ~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMEL  144 (361)
T KOG1006|consen   65 NLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMEL  144 (361)
T ss_pred             hHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHH
Confidence            3445578999999999998764 699999999977544 4567788888876555 699999999999999999999999


Q ss_pred             CCCCChhhhhh--ccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          553 MPNKSLDFFLF--DSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       553 ~~~gsL~~~l~--~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      |+ .||+.+..  ...+...++++..-.|......||.||...-  .|||||+||+||||+..|.|||||||++-.+...
T Consensus       145 Md-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~S  221 (361)
T KOG1006|consen  145 MD-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDS  221 (361)
T ss_pred             Hh-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHHHH
Confidence            95 46654432  1234456888888899999999999998754  7999999999999999999999999999765432


Q ss_pred             ccccccccccccccccccccccc--CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCc
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQQ--GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP  708 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~~--~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~  708 (795)
                      -   ..+.-.|-..|||||.+..  ..|+.++||||||++|||+.||..|+...+..-.++.    ..... ....+.  
T Consensus       222 i---AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~----~Vv~g-dpp~l~--  291 (361)
T KOG1006|consen  222 I---AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLC----QVVIG-DPPILL--  291 (361)
T ss_pred             H---HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHH----HHHcC-CCCeec--
Confidence            2   1233568889999998854  4599999999999999999999999865443211111    11111 111111  


Q ss_pred             cccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          709 TLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       709 ~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                        .+....+....+.++|..||..|.++||...+++++
T Consensus       292 --~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~  327 (361)
T KOG1006|consen  292 --FDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF  327 (361)
T ss_pred             --CcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence              112223456688999999999999999999999874

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.97  E-value=2e-31  Score=277.80  Aligned_cols=239  Identities=27%  Similarity=0.325  Sum_probs=193.1

Q ss_pred             cCcCCcccEEEeEec-CcceEEEEEecccCcc---chHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCCCCCh
Q 003786          483 LGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQ---GQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSL  558 (795)
Q Consensus       483 LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL  558 (795)
                      ||+|+||.||++... +++.+|+|++.+....   ....+.+|+.++++++||||+++++.+..+...++||||+++++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            799999999999865 4889999998764322   446789999999999999999999999999999999999999999


Q ss_pred             hhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcccccccc
Q 003786          559 DFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKR  638 (795)
Q Consensus       559 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~~~~  638 (795)
                      .+++...   ..+++..+..++.|+++||.|||+.+   ++|+||+|+||+++.++.++|+|||++.......  .....
T Consensus        81 ~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lh~~~---~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~  152 (250)
T cd05123          81 FSHLSKE---GRFSEERARFYAAEIVLALEYLHSLG---IIYRDLKPENILLDADGHIKLTDFGLAKELSSEG--SRTNT  152 (250)
T ss_pred             HHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcceEEEcCCCcEEEeecCcceecccCC--CcccC
Confidence            9988433   35889999999999999999999987   9999999999999999999999999998654332  12334


Q ss_pred             cccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhhHHH
Q 003786          639 IVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLI  718 (795)
Q Consensus       639 ~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~  718 (795)
                      ..++..|+|||.+.+...+.++|+||||+++|+|++|..|+...+...  .....    ....          ...+...
T Consensus       153 ~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~--~~~~~----~~~~----------~~~~~~~  216 (250)
T cd05123         153 FCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKE--IYEKI----LKDP----------LRFPEFL  216 (250)
T ss_pred             CcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH--HHHHH----hcCC----------CCCCCCC
Confidence            568899999999988889999999999999999999999986543211  11111    0000          0111122


Q ss_pred             HHHHHHHHHhhccCCCCCCCCH---HHHHH
Q 003786          719 LNRYINVGLLCVQEDAADRPTM---FEVVS  745 (795)
Q Consensus       719 ~~~l~~li~~cL~~dP~~RPt~---~evl~  745 (795)
                      +..+.+++.+||+.+|++||++   .++++
T Consensus       217 ~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~  246 (250)
T cd05123         217 SPEARDLISGLLQKDPTKRLGSGGAEEIKA  246 (250)
T ss_pred             CHHHHHHHHHHhcCCHhhCCCcccHHHHHh
Confidence            4567889999999999999999   55554

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.97  E-value=1.9e-31  Score=314.96  Aligned_cols=146  Identities=27%  Similarity=0.390  Sum_probs=130.6

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCc---cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG---QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      .++|.+.++||+|+||.||+|+.. +++.||||++.....   .....+.+|+.+++.++||||+++++++......++|
T Consensus         3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV   82 (669)
T cd05610           3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV   82 (669)
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence            468999999999999999999875 588999999965432   2236788999999999999999999999999999999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccc
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR  625 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~  625 (795)
                      |||+.+++|..++..   ...+++..+..++.||+.||.|||..+   |+||||||+||||+.++.+||+|||+++
T Consensus        83 mEy~~g~~L~~li~~---~~~l~~~~~~~i~~qil~aL~yLH~~g---IiHrDLKP~NILl~~~g~vkL~DFGls~  152 (669)
T cd05610          83 MEYLIGGDVKSLLHI---YGYFDEEMAVKYISEVALALDYLHRHG---IIHRDLKPDNMLISNEGHIKLTDFGLSK  152 (669)
T ss_pred             EeCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence            999999999998843   345788899999999999999999987   9999999999999999999999999986

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.97  E-value=7.1e-32  Score=248.08  Aligned_cols=265  Identities=23%  Similarity=0.257  Sum_probs=197.0

Q ss_pred             CCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      +|...++||+|.||+||+|+.. +++.||+|+++...  +.-.....+|+-+|+.++|.|||++++....+..+.+|+||
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~   82 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF   82 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence            4667789999999999999864 58889999886542  23346788999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      |.. .|..+..  .-++.++.+.+..++.|+++||.++|+++   +.||||||.|+||+.+|.+||+|||+++.++-.. 
T Consensus        83 cdq-dlkkyfd--slng~~d~~~~rsfmlqllrgl~fchshn---vlhrdlkpqnllin~ngelkladfglarafgipv-  155 (292)
T KOG0662|consen   83 CDQ-DLKKYFD--SLNGDLDPEIVRSFMLQLLRGLGFCHSHN---VLHRDLKPQNLLINRNGELKLADFGLARAFGIPV-  155 (292)
T ss_pred             hhH-HHHHHHH--hcCCcCCHHHHHHHHHHHHhhhhhhhhhh---hhhccCCcceEEeccCCcEEecccchhhhcCCce-
Confidence            975 4444432  23456888999999999999999999998   9999999999999999999999999999876443 


Q ss_pred             cccccccccccccccccccccC-CCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhh--hccCccccc---c
Q 003786          633 QSKTKRIVGTYGYMSPEYAQQG-LFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWD--LWKDDRAWE---L  705 (795)
Q Consensus       633 ~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~---~  705 (795)
                       ...+.-+-|..|.+|.++.+. -|+...|+||-|||+.|+.. |++-|++.+..++ +....+.  ...++....   +
T Consensus       156 -rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddq-lkrif~~lg~p~ed~wps~t~l  233 (292)
T KOG0662|consen  156 -RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ-LKRIFRLLGTPTEDQWPSMTKL  233 (292)
T ss_pred             -EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHH-HHHHHHHhCCCccccCCccccC
Confidence             223334678999999998874 68999999999999999996 4544555553332 2211111  111211111   1


Q ss_pred             cCccccc---------hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          706 IDPTLQN---------EASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       706 id~~l~~---------~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      -|-....         ++-+.....=.+++++.|.-+|..|.++++.+++-..
T Consensus       234 pdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf  286 (292)
T KOG0662|consen  234 PDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYF  286 (292)
T ss_pred             CCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCccc
Confidence            1111110         1111222334578889999999999999999886443

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.97  E-value=1.7e-31  Score=276.69  Aligned_cols=219  Identities=18%  Similarity=0.106  Sum_probs=175.7

Q ss_pred             CCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCCCCChhhhhhc
Q 003786          486 GGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFD  564 (795)
Q Consensus       486 G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~  564 (795)
                      |.+|.||+++.. +++.+|+|++....     .+.+|...+....||||+++++++.+.+..++||||+++++|.+++..
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   78 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK   78 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence            889999999864 58899999996542     334556666667899999999999999999999999999999888843


Q ss_pred             cCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcccccccccccccc
Q 003786          565 STKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG  644 (795)
Q Consensus       565 ~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~  644 (795)
                      .   ..+++..+..++.|++.||.|||+.+   |+||||||+||+++.++.++|+|||++......     .....++..
T Consensus        79 ~---~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~-----~~~~~~~~~  147 (237)
T cd05576          79 F---LNIPEECVKRWAAEMVVALDALHREG---IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS-----CDGEAVENM  147 (237)
T ss_pred             h---cCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEEEecccchhccccc-----cccCCcCcc
Confidence            2   34889999999999999999999988   999999999999999999999999988655322     122345778


Q ss_pred             cccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhhHHHHHHHHH
Q 003786          645 YMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYIN  724 (795)
Q Consensus       645 y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~  724 (795)
                      |+|||.+....++.++||||+||++|||++|..|+........                ...    ....+......+.+
T Consensus       148 y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~----------------~~~----~~~~~~~~~~~~~~  207 (237)
T cd05576         148 YCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGIN----------------THT----TLNIPEWVSEEARS  207 (237)
T ss_pred             ccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhcc----------------ccc----ccCCcccCCHHHHH
Confidence            9999999888899999999999999999999977643211000                000    00112223456788


Q ss_pred             HHHhhccCCCCCCCCH
Q 003786          725 VGLLCVQEDAADRPTM  740 (795)
Q Consensus       725 li~~cL~~dP~~RPt~  740 (795)
                      ++.+||+.||++||++
T Consensus       208 li~~~l~~dp~~R~~~  223 (237)
T cd05576         208 LLQQLLQFNPTERLGA  223 (237)
T ss_pred             HHHHHccCCHHHhcCC
Confidence            9999999999999997

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=7.4e-32  Score=278.20  Aligned_cols=260  Identities=25%  Similarity=0.344  Sum_probs=199.1

Q ss_pred             HHccCCccccccCcCCcccEEEeEe-cCcceEEEEEecccC--cc-c----hHHHHHHHHHHHhcCCcccceeeeeeeec
Q 003786          472 AATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQS--GQ-G----QEEFKNEIKLIAKLQHRNLVRLLGCCIEL  543 (795)
Q Consensus       472 ~~~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~-~----~~~~~~E~~~l~~l~h~niv~l~~~~~~~  543 (795)
                      ...++|-+.+.||+|||+.||++.+ ...+.||||+-....  .. .    .+...+|..|-+.|+||.||++|++|.-+
T Consensus       460 tLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslD  539 (775)
T KOG1151|consen  460 TLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLD  539 (775)
T ss_pred             chHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeec
Confidence            3457899999999999999999974 457788999864321  11 1    12356899999999999999999998754


Q ss_pred             -ceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEEC---CCCCeeee
Q 003786          544 -EEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLD---KDMNPKIS  619 (795)
Q Consensus       544 -~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~---~~~~vkL~  619 (795)
                       +..+-|+|||+|.+|+.+|   ...+.+++.++..|+.||..||.||.+.. .+|||-||||.||||-   .-|.+||+
T Consensus       540 tdsFCTVLEYceGNDLDFYL---KQhklmSEKEARSIiMQiVnAL~YLNEik-pPIIHYDLKPgNILLv~GtacGeIKIT  615 (775)
T KOG1151|consen  540 TDSFCTVLEYCEGNDLDFYL---KQHKLMSEKEARSIIMQIVNALKYLNEIK-PPIIHYDLKPGNILLVNGTACGEIKIT  615 (775)
T ss_pred             cccceeeeeecCCCchhHHH---HhhhhhhHHHHHHHHHHHHHHHHHHhccC-CCeeeeccCCccEEEecCcccceeEee
Confidence             5677899999999999999   45667999999999999999999999885 6899999999999994   45889999


Q ss_pred             ccccccccCCCccc-----cccccccccccccccccccc----CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHh
Q 003786          620 DFGMARIFGGDELQ-----SKTKRIVGTYGYMSPEYAQQ----GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL  690 (795)
Q Consensus       620 DFGla~~~~~~~~~-----~~~~~~~gt~~y~APE~~~~----~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~  690 (795)
                      ||||++++..+...     ..++...||.+|++||.+.-    ..++.|+||||.|||+|+.+.|+.||....... .++
T Consensus       616 DFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQ-dIL  694 (775)
T KOG1151|consen  616 DFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQ-DIL  694 (775)
T ss_pred             ecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHH-HHH
Confidence            99999988654332     23556789999999997632    357899999999999999999999997543222 222


Q ss_pred             HhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 003786          691 GHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVS  745 (795)
Q Consensus       691 ~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  745 (795)
                      ... ..++...+...        ..+....+...+|.+||++.-++|....++..
T Consensus       695 qeN-TIlkAtEVqFP--------~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~  740 (775)
T KOG1151|consen  695 QEN-TILKATEVQFP--------PKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC  740 (775)
T ss_pred             hhh-chhcceeccCC--------CCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence            211 11122222111        12223446678999999999999988777654

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=1.5e-31  Score=286.62  Aligned_cols=203  Identities=24%  Similarity=0.359  Sum_probs=174.2

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccCcc---chHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQ---GQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      .-|..++.||-|+||.|.++... +...||+|.+++.+-.   .....+.|..||..-+.+-||+||..|++.+.+|+||
T Consensus       629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM  708 (1034)
T KOG0608|consen  629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM  708 (1034)
T ss_pred             cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence            34778899999999999999754 4677999999876433   3456789999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccC--
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG--  628 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~--  628 (795)
                      +|++||++-.+|   .+.+.++++.+..++.++..|+.+.|..|   +|||||||+|||||.+|+|||+||||+.-+.  
T Consensus       709 dYIPGGDmMSLL---IrmgIFeE~LARFYIAEltcAiesVHkmG---FIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWT  782 (1034)
T KOG0608|consen  709 DYIPGGDMMSLL---IRMGIFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT  782 (1034)
T ss_pred             eccCCccHHHHH---HHhccCHHHHHHHHHHHHHHHHHHHHhcc---ceecccCccceEEccCCceeeeeccccccceec
Confidence            999999998888   45567899999999999999999999998   9999999999999999999999999986431  


Q ss_pred             -------CCcc-------------------------------cccccccccccccccccccccCCCCcccchhhHHHHHH
Q 003786          629 -------GDEL-------------------------------QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLL  670 (795)
Q Consensus       629 -------~~~~-------------------------------~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~  670 (795)
                             ..+.                               .......+||+.|+|||++....|+..+|+||.|||||
T Consensus       783 HdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~  862 (1034)
T KOG0608|consen  783 HDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILY  862 (1034)
T ss_pred             cccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHH
Confidence                   0000                               00012357999999999999999999999999999999


Q ss_pred             HHHhCCCCCCCCC
Q 003786          671 ETLSSKRNTDFSN  683 (795)
Q Consensus       671 elltG~~p~~~~~  683 (795)
                      ||+.|+.||-...
T Consensus       863 em~~g~~pf~~~t  875 (1034)
T KOG0608|consen  863 EMLVGQPPFLADT  875 (1034)
T ss_pred             HHhhCCCCccCCC
Confidence            9999999996544

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=3.3e-32  Score=262.97  Aligned_cols=275  Identities=22%  Similarity=0.359  Sum_probs=200.5

Q ss_pred             cCCccccccCcCCcccEEEeEecC-cceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeec--------
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL--------  543 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~-~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--------  543 (795)
                      ..|+...+||+|.||.||+|+.++ |++||+|++..+.  ..-.....+|+.+|..|+|+|++.+++.|...        
T Consensus        17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r   96 (376)
T KOG0669|consen   17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR   96 (376)
T ss_pred             hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence            457778899999999999998654 7889999765432  12235667899999999999999999887643        


Q ss_pred             ceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccc
Q 003786          544 EEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGM  623 (795)
Q Consensus       544 ~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGl  623 (795)
                      ...++||.+|+. +|.-++.+.  .-.++..++.+++.++..||.|+|...   |+|||+||+|+||+.+|.+||+|||+
T Consensus        97 ~t~ylVf~~ceh-DLaGlLsn~--~vr~sls~Ikk~Mk~Lm~GL~~iHr~k---ilHRDmKaaNvLIt~dgilklADFGl  170 (376)
T KOG0669|consen   97 ATFYLVFDFCEH-DLAGLLSNR--KVRFSLSEIKKVMKGLMNGLYYIHRNK---ILHRDMKAANVLITKDGILKLADFGL  170 (376)
T ss_pred             ceeeeeHHHhhh-hHHHHhcCc--cccccHHHHHHHHHHHHHHHHHHHHhh---HHhhcccHhhEEEcCCceEEeecccc
Confidence            347899999976 455555322  234788899999999999999999887   99999999999999999999999999


Q ss_pred             ccccCCCcc--ccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcch-hHhHh-------
Q 003786          624 ARIFGGDEL--QSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSL-TLLGH-------  692 (795)
Q Consensus       624 a~~~~~~~~--~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~-~~~~~-------  692 (795)
                      ++.+.....  ....+..+-|..|.+||.+.+ ..|+++.|||.-|||+.||+++.+-+........ .++..       
T Consensus       171 ar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tk  250 (376)
T KOG0669|consen  171 ARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITK  250 (376)
T ss_pred             ccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCc
Confidence            987643221  222334556999999997765 6899999999999999999999988776553322 22221       


Q ss_pred             -HhhhccCccccccc--Cccccchhh--HHH------HHHHHHHHHhhccCCCCCCCCHHHHHHHHccccCCCC
Q 003786          693 -AWDLWKDDRAWELI--DPTLQNEAS--YLI------LNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLP  755 (795)
Q Consensus       693 -~~~~~~~~~~~~~i--d~~l~~~~~--~~~------~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~~~l~  755 (795)
                       .|....+-..++.+  .|.-.....  .+.      ....++++.++|..||.+|+.+++++.+--.-..+.|
T Consensus       251 evWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~p  324 (376)
T KOG0669|consen  251 EVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPMP  324 (376)
T ss_pred             ccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCCcc
Confidence             12211222222222  111111111  111      1256789999999999999999999998655444444

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.97  E-value=1.8e-31  Score=254.56  Aligned_cols=262  Identities=22%  Similarity=0.336  Sum_probs=202.1

Q ss_pred             HHHccCCccccccCcCCcccEEEeE-ecCcceEEEEEecccCccchHHHHHHHHHHHhcC-Ccccceeeeeeeecce--e
Q 003786          471 SAATANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQ-HRNLVRLLGCCIELEE--K  546 (795)
Q Consensus       471 ~~~~~~~~~~~~LG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~--~  546 (795)
                      ....++|++.+++|+|.|+.||.|. ..++++++||+++.   ...+.+++|+.||+.|. ||||+++++...+...  .
T Consensus        34 wg~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP---VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sktp  110 (338)
T KOG0668|consen   34 WGNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP---VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTP  110 (338)
T ss_pred             ccccchHHHHHHHcCccHhhHhcccccCCCceEEEeeech---HHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCc
Confidence            4467899999999999999999997 45688999999964   34578999999999998 9999999999887654  4


Q ss_pred             eEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCC-CCeeeecccccc
Q 003786          547 ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKD-MNPKISDFGMAR  625 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~-~~vkL~DFGla~  625 (795)
                      .||+||+.+.+...+.      ..+....+..++.++++||.|+|++|   |+|||+||.|++||.. -.++|+|+|+|.
T Consensus       111 aLiFE~v~n~Dfk~ly------~tl~d~dIryY~~elLkALdyCHS~G---ImHRDVKPhNvmIdh~~rkLrlIDWGLAE  181 (338)
T KOG0668|consen  111 SLIFEYVNNTDFKQLY------PTLTDYDIRYYIYELLKALDYCHSMG---IMHRDVKPHNVMIDHELRKLRLIDWGLAE  181 (338)
T ss_pred             hhHhhhhccccHHHHh------hhhchhhHHHHHHHHHHHHhHHHhcC---cccccCCcceeeechhhceeeeeecchHh
Confidence            6999999988776544      34667788999999999999999999   9999999999999865 569999999999


Q ss_pred             ccCCCccccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCc----
Q 003786          626 IFGGDELQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDD----  700 (795)
Q Consensus       626 ~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~----  700 (795)
                      ++.+...   .+-.+.+..|--||.+.. ..|+..-|+|||||+|..|+..+.||-.......+++..+..+-.++    
T Consensus       182 FYHp~~e---YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Y  258 (338)
T KOG0668|consen  182 FYHPGKE---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAY  258 (338)
T ss_pred             hcCCCce---eeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHH
Confidence            8765432   222456778889998876 67899999999999999999999999766555554444332211110    


Q ss_pred             --ccccccCcccc----------------chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          701 --RAWELIDPTLQ----------------NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       701 --~~~~~id~~l~----------------~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                        +..-.++|.+.                .+.......+.++++.+.|..|..+|||++|...+-
T Consensus       259 l~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~Hp  323 (338)
T KOG0668|consen  259 LNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHP  323 (338)
T ss_pred             HHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCc
Confidence              00000122111                111112235778999999999999999999998753

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=9.4e-31  Score=272.19  Aligned_cols=266  Identities=26%  Similarity=0.404  Sum_probs=200.2

Q ss_pred             ccCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHh--cCCcccceeeeeeeec----ceee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAK--LQHRNLVRLLGCCIEL----EEKI  547 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~----~~~~  547 (795)
                      ..+..+.+.||+|.||.||+|++ .|+.||||++...   +++...+|.+|.+.  |+|+||+.+++.-..+    .+++
T Consensus       210 arqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~sr---dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLw  285 (513)
T KOG2052|consen  210 ARQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSSR---DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLW  285 (513)
T ss_pred             hheeEEEEEecCccccceeeccc-cCCceEEEEeccc---chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEE
Confidence            46678899999999999999988 6899999999754   45678888888875  5999999999875544    3678


Q ss_pred             EEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhc-----CCCcEEeccCCCCcEEECCCCCeeeeccc
Q 003786          548 LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY-----SRLRVIHRDLKASNILLDKDMNPKISDFG  622 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-----~~~~iiHrDikp~NIll~~~~~vkL~DFG  622 (795)
                      ||++|-++|||.++|.    +..++-+..++++..+|.||++||..     |.+.|.|||||..||||.+++...|+|+|
T Consensus       286 LvTdYHe~GSL~DyL~----r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLG  361 (513)
T KOG2052|consen  286 LVTDYHEHGSLYDYLN----RNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG  361 (513)
T ss_pred             EeeecccCCcHHHHHh----hccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeece
Confidence            9999999999999993    35688899999999999999999964     56779999999999999999999999999


Q ss_pred             cccccCCC--cccccccccccccccccccccccC----CC-C-cccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHh
Q 003786          623 MARIFGGD--ELQSKTKRIVGTYGYMSPEYAQQG----LF-S-IKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAW  694 (795)
Q Consensus       623 la~~~~~~--~~~~~~~~~~gt~~y~APE~~~~~----~~-~-~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~  694 (795)
                      ||-.....  ...-..+..+||.+|||||++...    .+ + ..+||||||.++||++....--+...+....+    .
T Consensus       362 LAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Py----y  437 (513)
T KOG2052|consen  362 LAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPY----Y  437 (513)
T ss_pred             eeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCc----c
Confidence            99866433  233345567899999999998543    22 2 45899999999999985321110000011110    1


Q ss_pred             hhccCcccc---------cccCcccc-chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcccc
Q 003786          695 DLWKDDRAW---------ELIDPTLQ-NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKT  751 (795)
Q Consensus       695 ~~~~~~~~~---------~~id~~l~-~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~  751 (795)
                      +....+...         +.+.|.+. ...+......+.+++..||..||..|-|+-.|.+.|.+..
T Consensus       438 d~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~  504 (513)
T KOG2052|consen  438 DVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLS  504 (513)
T ss_pred             cCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHh
Confidence            111111111         11222222 2244566778899999999999999999999998887643

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.97  E-value=2.1e-30  Score=301.46  Aligned_cols=258  Identities=29%  Similarity=0.417  Sum_probs=204.6

Q ss_pred             cCCccccccCcCCcccEEEeEec----C----cceEEEEEecccCc-cchHHHHHHHHHHHhc-CCcccceeeeeeeecc
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL----N----GQEVAVKRLSSQSG-QGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELE  544 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~----~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~  544 (795)
                      ++..+.+.||+|.||.|++|...    .    ...||||.+..... ...+.+..|+++|+.+ +|+||+.++++|....
T Consensus       296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~  375 (609)
T KOG0200|consen  296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDG  375 (609)
T ss_pred             hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCC
Confidence            44566679999999999999732    1    35699999876433 3457889999999998 6999999999999999


Q ss_pred             eeeEEeecCCCCChhhhhhccC-----------Cc--ccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEEC
Q 003786          545 EKILIYEYMPNKSLDFFLFDST-----------KE--NLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLD  611 (795)
Q Consensus       545 ~~~lv~E~~~~gsL~~~l~~~~-----------~~--~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~  611 (795)
                      ..++|+||+..|+|..+++...           ..  ..+.......++.|||.|++||++..   +|||||..+|||+.
T Consensus       376 ~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~---~vHRDLAaRNVLi~  452 (609)
T KOG0200|consen  376 PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP---CVHRDLAARNVLIT  452 (609)
T ss_pred             ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC---ccchhhhhhhEEec
Confidence            9999999999999999997655           00  23778889999999999999999987   99999999999999


Q ss_pred             CCCCeeeeccccccccCCCcccccccccc--cccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchh
Q 003786          612 KDMNPKISDFGMARIFGGDELQSKTKRIV--GTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLT  688 (795)
Q Consensus       612 ~~~~vkL~DFGla~~~~~~~~~~~~~~~~--gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~  688 (795)
                      ++..+||+|||+++............ ..  -...|||||.+....|+.|+|||||||+||||++ |..|++.-.. ...
T Consensus       453 ~~~~~kIaDFGlar~~~~~~~y~~~~-~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~-~~~  530 (609)
T KOG0200|consen  453 KNKVIKIADFGLARDHYNKDYYRTKS-SAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPP-TEE  530 (609)
T ss_pred             CCCEEEEccccceeccCCCCceEecC-CCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCc-HHH
Confidence            99999999999999765444332111 12  2345999999999999999999999999999997 5666654110 111


Q ss_pred             HhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          689 LLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       689 ~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                      +             .+.+.+..+.+.+..+..++.+++..||+.+|++||++.++++.++..
T Consensus       531 l-------------~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~  579 (609)
T KOG0200|consen  531 L-------------LEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH  579 (609)
T ss_pred             H-------------HHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence            1             112223333445555677888999999999999999999999998873

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.97  E-value=1.1e-29  Score=262.40  Aligned_cols=238  Identities=29%  Similarity=0.359  Sum_probs=192.5

Q ss_pred             CcccEEEeEec-CcceEEEEEecccCccc-hHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCCCCChhhhhhc
Q 003786          487 GFGPVYKGRLL-NGQEVAVKRLSSQSGQG-QEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFD  564 (795)
Q Consensus       487 ~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~  564 (795)
                      +||.||+|+.. +++.+|+|++....... .+.+.+|++.+++++|+||+++++.+......++++||+++++|..++..
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~   80 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK   80 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence            58999999876 48999999997665444 68899999999999999999999999999999999999999999998854


Q ss_pred             cCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcccccccccccccc
Q 003786          565 STKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG  644 (795)
Q Consensus       565 ~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~  644 (795)
                      ..   .+++..+..++.++++++.+||+.+   ++|+||+|+||+++.++.++|+|||.+.......   ......++..
T Consensus        81 ~~---~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~  151 (244)
T smart00220       81 RG---RLSEDEARFYARQILSALEYLHSNG---IIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---LLTTFVGTPE  151 (244)
T ss_pred             cc---CCCHHHHHHHHHHHHHHHHHHHHcC---eecCCcCHHHeEECCCCcEEEccccceeeecccc---ccccccCCcC
Confidence            32   2788999999999999999999987   9999999999999999999999999998765432   2334568889


Q ss_pred             cccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhhHHHHHHHHH
Q 003786          645 YMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYIN  724 (795)
Q Consensus       645 y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~  724 (795)
                      |+|||.+....++.++||||||+++++|++|..|+........ ....    ....... .      ..........+.+
T Consensus       152 ~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~-~~~~----~~~~~~~-~------~~~~~~~~~~~~~  219 (244)
T smart00220      152 YMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLE-LFKK----IGKPKPP-F------PPPEWKISPEAKD  219 (244)
T ss_pred             CCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHH----HhccCCC-C------ccccccCCHHHHH
Confidence            9999999888899999999999999999999999865321111 1111    0111000 0      0000003457889


Q ss_pred             HHHhhccCCCCCCCCHHHHHH
Q 003786          725 VGLLCVQEDAADRPTMFEVVS  745 (795)
Q Consensus       725 li~~cL~~dP~~RPt~~evl~  745 (795)
                      ++.+|+..+|++||++.++++
T Consensus       220 ~i~~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      220 LIRKLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             HHHHHccCCchhccCHHHHhh
Confidence            999999999999999999987

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.97  E-value=3.5e-30  Score=296.83  Aligned_cols=263  Identities=19%  Similarity=0.185  Sum_probs=168.9

Q ss_pred             HccCCccccccCcCCcccEEEeEec-C----cceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeee------ee
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-N----GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGC------CI  541 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~------~~  541 (795)
                      ..++|++.++||+|+||.||+|++. +    ++.||||++....  ..+...+|  .++...+.++..++..      ..
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~--~~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~  205 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYG--AVEIWMNE--RVRRACPNSCADFVYGFLEPVSSK  205 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccc--hhHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence            5678999999999999999999865 3    6889999875432  11111111  1222223333332222      24


Q ss_pred             ecceeeEEeecCCCCChhhhhhccCCc-----------------ccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCC
Q 003786          542 ELEEKILIYEYMPNKSLDFFLFDSTKE-----------------NLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLK  604 (795)
Q Consensus       542 ~~~~~~lv~E~~~~gsL~~~l~~~~~~-----------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDik  604 (795)
                      .....++|+||+++++|.+++......                 .......+..++.||+.||.|||+.+   |+|||||
T Consensus       206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g---IiHRDLK  282 (566)
T PLN03225        206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG---IVHRDVK  282 (566)
T ss_pred             cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC---EEeCcCC
Confidence            566789999999999999888543210                 01112345679999999999999987   9999999


Q ss_pred             CCcEEECC-CCCeeeeccccccccCCCcccccccccccccccccccccccC----------------------CCCcccc
Q 003786          605 ASNILLDK-DMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG----------------------LFSIKSD  661 (795)
Q Consensus       605 p~NIll~~-~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~----------------------~~~~k~D  661 (795)
                      |+|||++. ++.+||+|||+++.+.... ........+++.|||||.+...                      .++.++|
T Consensus       283 P~NILl~~~~~~~KL~DFGlA~~l~~~~-~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~D  361 (566)
T PLN03225        283 PQNIIFSEGSGSFKIIDLGAAADLRVGI-NYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFD  361 (566)
T ss_pred             HHHEEEeCCCCcEEEEeCCCcccccccc-ccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcc
Confidence            99999986 5899999999998653322 1223446789999999965321                      2455779


Q ss_pred             hhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhh-ccCcccccccCccccchh------hHHHHHHHHHHHHhhccCCC
Q 003786          662 VFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDL-WKDDRAWELIDPTLQNEA------SYLILNRYINVGLLCVQEDA  734 (795)
Q Consensus       662 vwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~id~~l~~~~------~~~~~~~l~~li~~cL~~dP  734 (795)
                      ||||||+||||+++..+.+..   ...+....... .........+.+......      .........+|+.+||+.||
T Consensus       362 VwSlGviL~el~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP  438 (566)
T PLN03225        362 IYSAGLIFLQMAFPNLRSDSN---LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKG  438 (566)
T ss_pred             cHHHHHHHHHHHhCcCCCchH---HHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCc
Confidence            999999999999876553311   11110000000 000000001111100000      00112244589999999999


Q ss_pred             CCCCCHHHHHHH
Q 003786          735 ADRPTMFEVVSM  746 (795)
Q Consensus       735 ~~RPt~~evl~~  746 (795)
                      ++|||+.|+++|
T Consensus       439 ~kR~ta~e~L~H  450 (566)
T PLN03225        439 RQRISAKAALAH  450 (566)
T ss_pred             ccCCCHHHHhCC
Confidence            999999999996

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.96  E-value=1.6e-29  Score=283.95  Aligned_cols=262  Identities=19%  Similarity=0.218  Sum_probs=179.9

Q ss_pred             HccCCccccccCcCCcccEEEeEe-----------------cCcceEEEEEecccCccchH--------------HHHHH
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRL-----------------LNGQEVAVKRLSSQSGQGQE--------------EFKNE  521 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~-----------------~~~~~vavK~~~~~~~~~~~--------------~~~~E  521 (795)
                      ..++|++.++||+|+||.||+|..                 ..++.||||++........+              ....|
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE  222 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE  222 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence            357899999999999999999963                 23567999998654322222              23346


Q ss_pred             HHHHHhcCCccc-----ceeeeeeee--------cceeeEEeecCCCCChhhhhhccCC---------------------
Q 003786          522 IKLIAKLQHRNL-----VRLLGCCIE--------LEEKILIYEYMPNKSLDFFLFDSTK---------------------  567 (795)
Q Consensus       522 ~~~l~~l~h~ni-----v~l~~~~~~--------~~~~~lv~E~~~~gsL~~~l~~~~~---------------------  567 (795)
                      +.++.+++|.++     ++++++|..        ....++||||+++++|.++++....                     
T Consensus       223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~  302 (507)
T PLN03224        223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP  302 (507)
T ss_pred             HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence            777777776554     677777653        3567999999999999998864211                     


Q ss_pred             cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccccccccccccccccc
Q 003786          568 ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMS  647 (795)
Q Consensus       568 ~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~A  647 (795)
                      ...+++..+..++.|++.+|.|||+.+   |+||||||+|||++.++.+||+|||++........ .......+++.|+|
T Consensus       303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~---ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~-~~~~~g~~tp~Y~a  378 (507)
T PLN03224        303 QDKRDINVIKGVMRQVLTGLRKLHRIG---IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN-FNPLYGMLDPRYSP  378 (507)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCchHhEEECCCCcEEEEeCcCccccccCCc-cCccccCCCcceeC
Confidence            122456778899999999999999987   99999999999999999999999999976533211 11112335789999


Q ss_pred             ccccccCC--------------------C--CcccchhhHHHHHHHHHhCCC-CCCCCCCcchh-----HhHhHhhhccC
Q 003786          648 PEYAQQGL--------------------F--SIKSDVFSFGVLLLETLSSKR-NTDFSNTNSLT-----LLGHAWDLWKD  699 (795)
Q Consensus       648 PE~~~~~~--------------------~--~~k~DvwSlGvil~elltG~~-p~~~~~~~~~~-----~~~~~~~~~~~  699 (795)
                      ||.+....                    |  ..+.||||+||++|+|++|.. |+.........     .....|.....
T Consensus       379 PE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~  458 (507)
T PLN03224        379 PEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKG  458 (507)
T ss_pred             hhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcc
Confidence            99875322                    1  235799999999999999875 54321100000     00111111111


Q ss_pred             cccccccCccccchhhHHHHHHHHHHHHhhccCCC---CCCCCHHHHHHH
Q 003786          700 DRAWELIDPTLQNEASYLILNRYINVGLLCVQEDA---ADRPTMFEVVSM  746 (795)
Q Consensus       700 ~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP---~~RPt~~evl~~  746 (795)
                      ...    +    -...........+++.++|..+|   .+|+|++|+++|
T Consensus       459 ~~~----~----~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H  500 (507)
T PLN03224        459 QKY----D----FSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH  500 (507)
T ss_pred             cCC----C----cccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence            111    0    01112234567789999998766   689999999985

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.96  E-value=2.8e-30  Score=264.52  Aligned_cols=264  Identities=22%  Similarity=0.234  Sum_probs=198.2

Q ss_pred             HHccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCC--c----ccceeeeeeeecc
Q 003786          472 AATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQH--R----NLVRLLGCCIELE  544 (795)
Q Consensus       472 ~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~----niv~l~~~~~~~~  544 (795)
                      ..+++|.+...||+|.||.|-.+... .+..||||+++.. ..-.+..+-|+++|+++.+  |    -+|.+.++|...+
T Consensus        86 ~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V-~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrg  164 (415)
T KOG0671|consen   86 ILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV-DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRG  164 (415)
T ss_pred             ccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH-HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccC
Confidence            34789999999999999999999743 4788999999643 2334556779999999942  3    3788889999999


Q ss_pred             eeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEEC-------------
Q 003786          545 EKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLD-------------  611 (795)
Q Consensus       545 ~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~-------------  611 (795)
                      +.++|+|.+ |-|+.+++..+ ....++...+..++.|+++++++||+..   ++|-||||+|||+.             
T Consensus       165 hiCivfell-G~S~~dFlk~N-~y~~fpi~~ir~m~~QL~~sv~fLh~~k---l~HTDLKPENILfvss~~~~~~~~k~~  239 (415)
T KOG0671|consen  165 HICIVFELL-GLSTFDFLKEN-NYIPFPIDHIRHMGYQLLESVAFLHDLK---LTHTDLKPENILFVSSEYFKTYNPKKK  239 (415)
T ss_pred             ceEEEEecc-ChhHHHHhccC-CccccchHHHHHHHHHHHHHHHHHHhcc---eeecCCChheEEEeccceEEEeccCCc
Confidence            999999987 55888888442 3455788899999999999999999987   99999999999993             


Q ss_pred             -------CCCCeeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCC
Q 003786          612 -------KDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNT  684 (795)
Q Consensus       612 -------~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~  684 (795)
                             ++..|||+|||-|+.-...     .+..+.|..|.|||++.+-..+..+||||+||||+|+.+|..-|...+.
T Consensus       240 ~~~~r~~ks~~I~vIDFGsAtf~~e~-----hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen  314 (415)
T KOG0671|consen  240 VCFIRPLKSTAIKVIDFGSATFDHEH-----HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHEN  314 (415)
T ss_pred             cceeccCCCcceEEEecCCcceeccC-----cceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCc
Confidence                   1345899999999864332     2457889999999999999999999999999999999999988876552


Q ss_pred             cch-hHhHhHhh--------------hccCcc--------------cccccCcc-ccchhhHHHHHHHHHHHHhhccCCC
Q 003786          685 NSL-TLLGHAWD--------------LWKDDR--------------AWELIDPT-LQNEASYLILNRYINVGLLCVQEDA  734 (795)
Q Consensus       685 ~~~-~~~~~~~~--------------~~~~~~--------------~~~~id~~-l~~~~~~~~~~~l~~li~~cL~~dP  734 (795)
                      .+. ...+..-.              .+..++              +.+.-.|. ........+..++.+|+..||..||
T Consensus       315 ~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP  394 (415)
T KOG0671|consen  315 LEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDP  394 (415)
T ss_pred             HHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCc
Confidence            221 11111100              000000              00000000 0111223455679999999999999


Q ss_pred             CCCCCHHHHHHH
Q 003786          735 ADRPTMFEVVSM  746 (795)
Q Consensus       735 ~~RPt~~evl~~  746 (795)
                      .+|+|+.|++++
T Consensus       395 ~~RiTl~EAL~H  406 (415)
T KOG0671|consen  395 ARRITLREALSH  406 (415)
T ss_pred             cccccHHHHhcC
Confidence            999999999985

>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity

Probab=99.96  E-value=1.4e-30  Score=234.42  Aligned_cols=110  Identities=52%  Similarity=0.768  Sum_probs=83.4

Q ss_pred             CCeEEEecCCCCCCccC--cceEEEeeCCceEEeCCCCceEEee-cCCCCc-cccEEEEccCCCeEEeecCCCCCcccce
Q 003786           70 PDTIVWVANRNSPIFDS--NAVLTISNGGKLVLLNQTNGTIWSS-NLSREV-KNPVAQLLDTGNLVVRDNFSSNSSEDYL  145 (795)
Q Consensus        70 ~~t~vW~an~~~p~~~~--~~~l~~~~~g~lvl~~~~~~~~Wst-~~~~~~-~~~~a~l~d~GNlvl~~~~~~~~~~~~~  145 (795)
                      ++||||+|||+.|+.+.  ..+|.|+.||||||+++.++++|+| ++.+.+ ..+.|.|+|+|||||+|     ..+++|
T Consensus         1 ~~tvvW~an~~~p~~~~s~~~~L~l~~dGnLvl~~~~~~~iWss~~t~~~~~~~~~~~L~~~GNlvl~d-----~~~~~l   75 (114)
T PF01453_consen    1 PRTVVWVANRNSPLTSSSGNYTLILQSDGNLVLYDSNGSVIWSSNNTSGRGNSGCYLVLQDDGNLVLYD-----SSGNVL   75 (114)
T ss_dssp             ---------TTEEEEECETTEEEEEETTSEEEEEETTTEEEEE--S-TTSS-SSEEEEEETTSEEEEEE-----TTSEEE
T ss_pred             CcccccccccccccccccccccceECCCCeEEEEcCCCCEEEEecccCCccccCeEEEEeCCCCEEEEe-----ecceEE
Confidence            46999999999999653  4899999999999999999999999 666655 67889999999999998     478999


Q ss_pred             ecccCCCchhhhccCeeccccccCcceeEEEecCCCCCC
Q 003786          146 WQSFDHPSDTLLAGMKLGWDLKTGLERYQTSWKSDDDPS  184 (795)
Q Consensus       146 WqSFd~PTDtlLpgqkl~~~~~~~~~~~l~Sw~s~~dps  184 (795)
                      ||||||||||+||||+|+.+..++....++||++..|||
T Consensus        76 W~Sf~~ptdt~L~~q~l~~~~~~~~~~~~~sw~s~~dps  114 (114)
T PF01453_consen   76 WQSFDYPTDTLLPGQKLGDGNVTGKNDSLTSWSSNTDPS  114 (114)
T ss_dssp             EESTTSSS-EEEEEET--TSEEEEESTSSEEEESS----
T ss_pred             EeecCCCccEEEeccCcccCCCccccceEEeECCCCCCC
Confidence            999999999999999999988888777899999999997

Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.96  E-value=5.4e-30  Score=241.24  Aligned_cols=211  Identities=28%  Similarity=0.364  Sum_probs=171.5

Q ss_pred             HHccCCccccccCcCCcccEEEeEe-cCcceEEEEEeccc-CccchHHHHHHHHHHHhc-CCcccceeeeeeeecceeeE
Q 003786          472 AATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQ-SGQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEEKIL  548 (795)
Q Consensus       472 ~~~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l  548 (795)
                      ...++...+..||+|+||.|=+-++ .+|+..|+|++... ..+...++.+|+.+..+. .+|++|.+||....+...++
T Consensus        43 V~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwI  122 (282)
T KOG0984|consen   43 VPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWI  122 (282)
T ss_pred             cchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEE
Confidence            3445566678899999999988875 46999999999764 334556778888876554 69999999999999999999


Q ss_pred             EeecCCCCChhhhhhc-cCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccccc
Q 003786          549 IYEYMPNKSLDFFLFD-STKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF  627 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~-~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~  627 (795)
                      .||.|+ .||+.+... -.+...+++..+-+|+..|..||.|||++-  .+||||+||+|||++.+|+||+||||++-.+
T Consensus       123 cME~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L  199 (282)
T KOG0984|consen  123 CMELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISGYL  199 (282)
T ss_pred             eHHHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccceee
Confidence            999996 467665532 234567899999999999999999999864  6999999999999999999999999999876


Q ss_pred             CCCcccccccccccccccccccccc----cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchh
Q 003786          628 GGDELQSKTKRIVGTYGYMSPEYAQ----QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLT  688 (795)
Q Consensus       628 ~~~~~~~~~~~~~gt~~y~APE~~~----~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~  688 (795)
                      .+...   .+-..|...|||||.+.    ...|+.|+||||||+++.||.+++.|++...++-.+
T Consensus       200 ~dSiA---kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~q  261 (282)
T KOG0984|consen  200 VDSIA---KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQ  261 (282)
T ss_pred             hhhhH---HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHH
Confidence            53321   12246888999999874    347999999999999999999999999866554443

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.96  E-value=6.1e-30  Score=284.21  Aligned_cols=247  Identities=27%  Similarity=0.365  Sum_probs=189.9

Q ss_pred             CccccccCcCCccc-EEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhc-CCcccceeeeeeeecceeeEEeecCC
Q 003786          477 FSTENKLGEGGFGP-VYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEEKILIYEYMP  554 (795)
Q Consensus       477 ~~~~~~LG~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~  554 (795)
                      |.-.+.+|.|..|+ ||+|.. +|++||||++-..   .....++|+..|+.- +|||||++|+.-.+....|+..|.|.
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e---~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~  586 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEE---FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA  586 (903)
T ss_pred             eccHHHcccCCCCcEEEEEee-CCceehHHHHhhH---hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh
Confidence            44456789999986 799987 6889999998542   345678999999988 59999999999999999999999995


Q ss_pred             CCChhhhhhccCCc-ccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECC---C--CCeeeeccccccccC
Q 003786          555 NKSLDFFLFDSTKE-NLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDK---D--MNPKISDFGMARIFG  628 (795)
Q Consensus       555 ~gsL~~~l~~~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~---~--~~vkL~DFGla~~~~  628 (795)
                       .+|.+++...... ..........+..|++.||++||+.+   ||||||||.||||+.   +  .+++|+|||+++...
T Consensus       587 -~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~---iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~  662 (903)
T KOG1027|consen  587 -CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK---IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA  662 (903)
T ss_pred             -hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc---cccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence             4888888653111 11111456788999999999999987   999999999999976   3  468999999999876


Q ss_pred             CCcc-cccccccccccccccccccccCCCCcccchhhHHHHHHHHHhC-CCCCCCCCCcchhHhHhHhhhccCccccccc
Q 003786          629 GDEL-QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSS-KRNTDFSNTNSLTLLGHAWDLWKDDRAWELI  706 (795)
Q Consensus       629 ~~~~-~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i  706 (795)
                      .... ........||.+|+|||++....-+.++||+||||++|..++| .+||+..-..+.+++...       .-...+
T Consensus       663 ~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~-------~~L~~L  735 (903)
T KOG1027|consen  663 GGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGN-------YTLVHL  735 (903)
T ss_pred             CCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcCc-------cceeee
Confidence            5432 2234557899999999999988888899999999999999987 888875444433332111       111111


Q ss_pred             CccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          707 DPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       707 d~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .+.      .+.  ...+||.+|+..+|..||++.+|+.|
T Consensus       736 ~~~------~d~--eA~dLI~~ml~~dP~~RPsa~~VL~H  767 (903)
T KOG1027|consen  736 EPL------PDC--EAKDLISRMLNPDPQLRPSATDVLNH  767 (903)
T ss_pred             ccC------chH--HHHHHHHHhcCCCcccCCCHHHHhCC
Confidence            110      111  56789999999999999999999975

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=1.1e-29  Score=247.95  Aligned_cols=265  Identities=22%  Similarity=0.309  Sum_probs=194.5

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEeccc--CccchHHHHHHHHHHHhcCCcccceeeeeeeec-----cee
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQ--SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL-----EEK  546 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~  546 (795)
                      .+.+-.+.||-|+||+||.++++ +|+.||+|++...  .....+.+.+|+++|.-++|.|++..++..+-.     +++
T Consensus        53 ~Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEi  132 (449)
T KOG0664|consen   53 QDIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQEL  132 (449)
T ss_pred             ccCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHH
Confidence            45667789999999999999875 5999999988543  223456788999999999999999988876543     356


Q ss_pred             eEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          547 ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                      |.++|.|.. +|..+|   .....++...+.-+.+||++||.|||+.+   |.||||||.|+|++.+..+||+|||+++.
T Consensus       133 YV~TELmQS-DLHKII---VSPQ~Ls~DHvKVFlYQILRGLKYLHsA~---ILHRDIKPGNLLVNSNCvLKICDFGLARv  205 (449)
T KOG0664|consen  133 YVLTELMQS-DLHKII---VSPQALTPDHVKVFVYQILRGLKYLHTAN---ILHRDIKPGNLLVNSNCILKICDFGLART  205 (449)
T ss_pred             HHHHHHHHh-hhhhee---ccCCCCCcchhhhhHHHHHhhhHHHhhcc---hhhccCCCccEEeccCceEEecccccccc
Confidence            788888853 566666   33455788888999999999999999998   99999999999999999999999999997


Q ss_pred             cCCCcccccccccccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCC-cchhHhHhHhhhccCc----
Q 003786          627 FGGDELQSKTKRIVGTYGYMSPEYAQQG-LFSIKSDVFSFGVLLLETLSSKRNTDFSNT-NSLTLLGHAWDLWKDD----  700 (795)
Q Consensus       627 ~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~-~~~~~~~~~~~~~~~~----  700 (795)
                      -..++....+ .-+-|..|.|||++++. .|+.++||||.|||+.||+..+.-|...+. ++..++   .++....    
T Consensus       206 ee~d~~~hMT-qEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lI---tdLLGTPs~Ea  281 (449)
T KOG0664|consen  206 WDQRDRLNMT-HEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMI---IDLLGTPSQEA  281 (449)
T ss_pred             cchhhhhhhH-HHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHH---HHHhCCCcHHH
Confidence            6554433332 24568899999999874 799999999999999999987766654331 111111   1111111    


Q ss_pred             -------ccccccC--------ccccc-hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          701 -------RAWELID--------PTLQN-EASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       701 -------~~~~~id--------~~l~~-~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                             ....++.        +.+.. ........+...+..+++..+|..|.+..+.+.++...
T Consensus       282 Mr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~  347 (449)
T KOG0664|consen  282 MKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLE  347 (449)
T ss_pred             HHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccccc
Confidence                   0000000        01111 01112234556788889999999999999999887553

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.95  E-value=3.8e-27  Score=237.14  Aligned_cols=211  Identities=38%  Similarity=0.585  Sum_probs=183.4

Q ss_pred             cCcCCcccEEEeEecC-cceEEEEEecccCcc-chHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCCCCChhh
Q 003786          483 LGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQ-GQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDF  560 (795)
Q Consensus       483 LG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL~~  560 (795)
                      ||+|.+|.||+++... ++++++|++...... ..+.+.+|++.++.++|++|+++++++......++++|++++++|..
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   80 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD   80 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence            6899999999998754 899999999765332 35789999999999999999999999999999999999999999999


Q ss_pred             hhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECC-CCCeeeeccccccccCCCccccccccc
Q 003786          561 FLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDK-DMNPKISDFGMARIFGGDELQSKTKRI  639 (795)
Q Consensus       561 ~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~-~~~vkL~DFGla~~~~~~~~~~~~~~~  639 (795)
                      ++....  ..+++..+..++.++++++.+||+.+   ++|+||+|.||+++. ++.++|+|||.+........  .....
T Consensus        81 ~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~---~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~  153 (215)
T cd00180          81 LLKENE--GKLSEDEILRILLQILEGLEYLHSNG---IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--LLKTI  153 (215)
T ss_pred             HHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--hhhcc
Confidence            985432  35788999999999999999999998   999999999999999 89999999999987643321  12335


Q ss_pred             ccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhhHHH
Q 003786          640 VGTYGYMSPEYAQQG-LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLI  718 (795)
Q Consensus       640 ~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~  718 (795)
                      .+...|++||.+... .++.+.|+|++|+++++|                                              
T Consensus       154 ~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l----------------------------------------------  187 (215)
T cd00180         154 VGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL----------------------------------------------  187 (215)
T ss_pred             cCCCCccChhHhcccCCCCchhhhHHHHHHHHHH----------------------------------------------
Confidence            678899999998877 889999999999999998                                              


Q ss_pred             HHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          719 LNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       719 ~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                       ..+.+++..|++.+|++||++.++++.|
T Consensus       188 -~~~~~~l~~~l~~~p~~R~~~~~l~~~~  215 (215)
T cd00180         188 -PELKDLIRKMLQKDPEKRPSAKEILEHL  215 (215)
T ss_pred             -HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence             4677899999999999999999998753

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.95  E-value=1.2e-28  Score=262.79  Aligned_cols=197  Identities=24%  Similarity=0.336  Sum_probs=169.0

Q ss_pred             HccCCccccccCcCCcccEEEeEecC-cceEEEEEecccCc--------cchHHHHHHHHHHHhcC---Ccccceeeeee
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSG--------QGQEEFKNEIKLIAKLQ---HRNLVRLLGCC  540 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~---h~niv~l~~~~  540 (795)
                      ...+|...++||+|+||.|+++.++. ..+|+||.+.++..        ...-.+-.|++||..++   |+||++++++|
T Consensus       559 k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF  638 (772)
T KOG1152|consen  559 KFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF  638 (772)
T ss_pred             ccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee
Confidence            34569999999999999999998764 67899998876421        12234557999999997   99999999999


Q ss_pred             eecceeeEEeec-CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeee
Q 003786          541 IELEEKILIYEY-MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKIS  619 (795)
Q Consensus       541 ~~~~~~~lv~E~-~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~  619 (795)
                      ++++..||+||- =++.+|.++|.   ..+.+++.++..|+.||+.|+++||+++   |||||||-+|+.++.+|-+||+
T Consensus       639 Eddd~yyl~te~hg~gIDLFd~IE---~kp~m~E~eAk~IFkQV~agi~hlh~~~---ivhrdikdenvivd~~g~~kli  712 (772)
T KOG1152|consen  639 EDDDYYYLETEVHGEGIDLFDFIE---FKPRMDEPEAKLIFKQVVAGIKHLHDQG---IVHRDIKDENVIVDSNGFVKLI  712 (772)
T ss_pred             ecCCeeEEEecCCCCCcchhhhhh---ccCccchHHHHHHHHHHHhccccccccC---ceecccccccEEEecCCeEEEe
Confidence            999999999995 45668888884   3445899999999999999999999999   9999999999999999999999


Q ss_pred             ccccccccCCCcccccccccccccccccccccccCCC-CcccchhhHHHHHHHHHhCCCCC
Q 003786          620 DFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLF-SIKSDVFSFGVLLLETLSSKRNT  679 (795)
Q Consensus       620 DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~-~~k~DvwSlGvil~elltG~~p~  679 (795)
                      |||.+.......    ...++||..|.|||++.+..| ...-|||+||++||.++....|+
T Consensus       713 dfgsaa~~ksgp----fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpy  769 (772)
T KOG1152|consen  713 DFGSAAYTKSGP----FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPY  769 (772)
T ss_pred             eccchhhhcCCC----cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCC
Confidence            999998765443    455899999999999999877 56679999999999999887775

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.95  E-value=1.8e-28  Score=250.42  Aligned_cols=266  Identities=25%  Similarity=0.307  Sum_probs=210.5

Q ss_pred             cHHhHHHHccCCccccccCcCCcccEEEeEe------cCcceEEEEEeccc-CccchHHHHHHHHHHHhcCCcccceeee
Q 003786          466 SLASVSAATANFSTENKLGEGGFGPVYKGRL------LNGQEVAVKRLSSQ-SGQGQEEFKNEIKLIAKLQHRNLVRLLG  538 (795)
Q Consensus       466 ~~~~i~~~~~~~~~~~~LG~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~  538 (795)
                      ..+++.....+++....+-+|.||.||.|.+      .+.+.|-+|.+... +......+..|...+..+.|||+..+.+
T Consensus       275 r~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~  354 (563)
T KOG1024|consen  275 RLQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLG  354 (563)
T ss_pred             hHHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeE
Confidence            3455666677889999999999999999943      23566888887543 3334567889999999999999999999


Q ss_pred             eeeecc-eeeEEeecCCCCChhhhhh-----ccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECC
Q 003786          539 CCIELE-EKILIYEYMPNKSLDFFLF-----DSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDK  612 (795)
Q Consensus       539 ~~~~~~-~~~lv~E~~~~gsL~~~l~-----~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~  612 (795)
                      ++.++. ..+.++.++.-|+|..|+.     +......+.-.+...++.|++.|++|||.++   |||.||..+|.+||+
T Consensus       355 V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~---ViHkDiAaRNCvIdd  431 (563)
T KOG1024|consen  355 VSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG---VIHKDIAARNCVIDD  431 (563)
T ss_pred             EEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC---cccchhhhhcceehh
Confidence            988654 5577789999999999997     3333445777788899999999999999998   999999999999999


Q ss_pred             CCCeeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhH
Q 003786          613 DMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLG  691 (795)
Q Consensus       613 ~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~  691 (795)
                      ..+|||+|=.+++.+-+.+.......-.....||+||.+.+..|+.++|||||||+||||++ |+.|+..-+..++.   
T Consensus       432 ~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~---  508 (563)
T KOG1024|consen  432 QLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEME---  508 (563)
T ss_pred             heeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHH---
Confidence            99999999999997766666555444455678999999999999999999999999999996 66665432221111   


Q ss_pred             hHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          692 HAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       692 ~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                         ...++         ..+-..+-++++++..++.-||...|++||+++|++.-|.+
T Consensus       509 ---~ylkd---------GyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLse  554 (563)
T KOG1024|consen  509 ---HYLKD---------GYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSE  554 (563)
T ss_pred             ---HHHhc---------cceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHH
Confidence               11111         12223344577889999999999999999999999998865

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.95  E-value=1.4e-28  Score=266.46  Aligned_cols=255  Identities=24%  Similarity=0.354  Sum_probs=205.8

Q ss_pred             HccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      ..++|++..++|.|.||.||+++.+ .++..|+|+++........-++.|+-+++..+|||||.+++.+...+..++.||
T Consensus        13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicME   92 (829)
T KOG0576|consen   13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICME   92 (829)
T ss_pred             CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEE
Confidence            3478999999999999999999865 588899999988877788889999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      ||.+|+|.+..+   ....+++.++...+++.+++++|||+++   -+|||||-.|||+++.|.+|++|||.+..+....
T Consensus        93 ycgggslQdiy~---~TgplselqiayvcRetl~gl~ylhs~g---k~hRdiKGanilltd~gDvklaDfgvsaqitati  166 (829)
T KOG0576|consen   93 YCGGGSLQDIYH---VTGPLSELQIAYVCRETLQGLKYLHSQG---KIHRDIKGANILLTDEGDVKLADFGVSAQITATI  166 (829)
T ss_pred             ecCCCcccceee---ecccchhHHHHHHHhhhhccchhhhcCC---cccccccccceeecccCceeecccCchhhhhhhh
Confidence            999999988763   3456888999999999999999999998   8999999999999999999999999998765332


Q ss_pred             cccccccccccccccccccc---ccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCc
Q 003786          632 LQSKTKRIVGTYGYMSPEYA---QQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP  708 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~---~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~  708 (795)
                        .+.+.+.||+.|||||+.   +.+.|..++|||++|+...|+---.+|..........++. ....+..        +
T Consensus       167 --~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~Lm-TkS~~qp--------p  235 (829)
T KOG0576|consen  167 --AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLM-TKSGFQP--------P  235 (829)
T ss_pred             --hhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHh-hccCCCC--------C
Confidence              345568999999999976   4578999999999999999998777664322211111111 1111111        1


Q ss_pred             cccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          709 TLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       709 ~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .+.+.  ..-...+.++++.||-.+|++||+++.+|++
T Consensus       236 ~lkDk--~kws~~fh~fvK~altknpKkRptaeklL~h  271 (829)
T KOG0576|consen  236 TLKDK--TKWSEFFHNFVKGALTKNPKKRPTAEKLLQH  271 (829)
T ss_pred             cccCC--ccchHHHHHHHHHHhcCCCccCCChhhheec
Confidence            11111  1223456789999999999999999988774

>PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation

Probab=99.94  E-value=3.4e-27  Score=212.09  Aligned_cols=108  Identities=44%  Similarity=0.981  Sum_probs=102.9

Q ss_pred             EeeCCCCCeeeeccCCC--cccccceeeeCCCeeEEEEecCCCceEEEEEECCCCcEEEEEEecCCCceEEEEecccccC
Q 003786          210 LCSGPWNGAIFAAIPSY--SYLYKPTVVDNEDEIYYRYDSYNSPVIMTLKLNPSGKIQHLIWNERNRTWEAFFSLPDRFC  287 (795)
Q Consensus       210 ~~sg~w~~~~f~~~p~~--~~~~~~~~~~n~~~~~~~~~~~~~~~~~rl~L~~~G~l~~~~w~~~~~~W~~~~~~p~~~C  287 (795)
                      ||+|||+|..|.++|.+  ..++.+.|+.+.+|++|+|...+.+.++|++|+++|++|+|.|++.++.|.+.|++|.++|
T Consensus         1 wrsG~WnG~~f~g~p~~~~~~~~~~~fv~~~~e~~~t~~~~~~s~~~r~~ld~~G~l~~~~w~~~~~~W~~~~~~p~d~C   80 (110)
T PF00954_consen    1 WRSGPWNGQRFSGIPEMSSNSLYNYSFVSNNEEVYYTYSLSNSSVLSRLVLDSDGQLQRYIWNESTQSWSVFWSAPKDQC   80 (110)
T ss_pred             CCccccCCeEECCcccccccceeEEEEEECCCeEEEEEecCCCceEEEEEEeeeeEEEEEEEecCCCcEEEEEEecccCC
Confidence            89999999999999944  4678999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcCCCCCcccCCCCCCCCCccccccccC
Q 003786          288 QFYGHCGANSICSFDKKPHCECLKGFELKS  317 (795)
Q Consensus       288 ~~~g~CG~~g~C~~~~~~~C~C~~gf~~~~  317 (795)
                      |+|+.||+||+|+.+..|.|.|++||+|++
T Consensus        81 d~y~~CG~~g~C~~~~~~~C~Cl~GF~P~n  110 (110)
T PF00954_consen   81 DVYGFCGPNGICNSNNSPKCSCLPGFEPKN  110 (110)
T ss_pred             CCccccCCccEeCCCCCCceECCCCcCCCc
Confidence            999999999999988899999999999974

This is sporophytically controlled by multiple alleles at a single locus (S). There are a total of 50 different S alleles in Brassica oleracea. S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles []. Most of the proteins within this family contain apple-like domain (IPR003609 from INTERPRO), which is predicted to possess protein- and/or carbohydrate-binding functions.; GO: 0048544 recognition of pollen

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.94  E-value=1.1e-27  Score=252.44  Aligned_cols=273  Identities=19%  Similarity=0.214  Sum_probs=208.5

Q ss_pred             ccHHhHHHHccCCccccccCcCCcccEEEeEecC-cceEEEEEecccCccchHHHHHHHHHHHhcC------Ccccceee
Q 003786          465 FSLASVSAATANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQ------HRNLVRLL  537 (795)
Q Consensus       465 ~~~~~i~~~~~~~~~~~~LG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~l~  537 (795)
                      |++.-......+|.+....|+|-|+.|..|.... |++||||+|... ....+.=+.|++||++|+      --|+++|+
T Consensus       422 Yrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN-E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~  500 (752)
T KOG0670|consen  422 YRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN-EVMHKTGLKELEILKKLNDADPEDKFHCLRLF  500 (752)
T ss_pred             EEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecc-hHHhhhhhHHHHHHHHhhccCchhhhHHHHHH
Confidence            5566666778899999999999999999998654 889999999643 223344568999999996      35899999


Q ss_pred             eeeeecceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCC-CCe
Q 003786          538 GCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKD-MNP  616 (795)
Q Consensus       538 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~-~~v  616 (795)
                      -.|.+.++++||+|-+. .+|.++|..-.++--|....+..++.|+..||..|...+   |+|.||||+||||++. ..+
T Consensus       501 r~F~hknHLClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~---vlHaDIKPDNiLVNE~k~iL  576 (752)
T KOG0670|consen  501 RHFKHKNHLCLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG---VLHADIKPDNILVNESKNIL  576 (752)
T ss_pred             HHhhhcceeEEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC---eeecccCccceEeccCccee
Confidence            99999999999999774 578888876666666888899999999999999999988   9999999999999876 458


Q ss_pred             eeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHh-HhHhh
Q 003786          617 KISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL-GHAWD  695 (795)
Q Consensus       617 kL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~-~~~~~  695 (795)
                      ||||||.|...+.++.    +...-+.-|.|||++.+-+|+...|+||.||.||||.||+.-|++.....+.-+ .....
T Consensus       577 KLCDfGSA~~~~enei----tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KG  652 (752)
T KOG0670|consen  577 KLCDFGSASFASENEI----TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKG  652 (752)
T ss_pred             eeccCccccccccccc----cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcC
Confidence            9999999987665442    223446679999999999999999999999999999999999887764444211 11100


Q ss_pred             hc-----cCc---------------------------ccccccCc------ccc-----chhhHHHHHHHHHHHHhhccC
Q 003786          696 LW-----KDD---------------------------RAWELIDP------TLQ-----NEASYLILNRYINVGLLCVQE  732 (795)
Q Consensus       696 ~~-----~~~---------------------------~~~~~id~------~l~-----~~~~~~~~~~l~~li~~cL~~  732 (795)
                      .+     ..+                           .+...+.|      .+.     ..-.......+.+|+..||..
T Consensus       653 k~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~L  732 (752)
T KOG0670|consen  653 KFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLIL  732 (752)
T ss_pred             CCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhcc
Confidence            00     000                           00001111      000     011123455788999999999


Q ss_pred             CCCCCCCHHHHHHH
Q 003786          733 DAADRPTMFEVVSM  746 (795)
Q Consensus       733 dP~~RPt~~evl~~  746 (795)
                      ||++|.|..+.|+|
T Consensus       733 dP~KRit~nqAL~H  746 (752)
T KOG0670|consen  733 DPEKRITVNQALKH  746 (752)
T ss_pred             ChhhcCCHHHHhcC
Confidence            99999999999874

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=5.8e-26  Score=238.66  Aligned_cols=133  Identities=28%  Similarity=0.353  Sum_probs=108.8

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcC-----C---cccceeeeeeee--
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQ-----H---RNLVRLLGCCIE--  542 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h---~niv~l~~~~~~--  542 (795)
                      ..+|.+.++||.|.|++||++.+. ..+.||+|+.+.. ..-.+....|+++|++++     |   ..||+|++.|..  
T Consensus        77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG  155 (590)
T KOG1290|consen   77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG  155 (590)
T ss_pred             CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence            478999999999999999999864 4678999998543 233466788999999984     3   369999999974  


Q ss_pred             --cceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEEC
Q 003786          543 --LEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLD  611 (795)
Q Consensus       543 --~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~  611 (795)
                        +.+++||+|++ |.+|..+|... ..+-++...+.+|+.||+.||.|||.++  +|||-||||+|||+.
T Consensus       156 pNG~HVCMVfEvL-GdnLLklI~~s-~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~  222 (590)
T KOG1290|consen  156 PNGQHVCMVFEVL-GDNLLKLIKYS-NYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLC  222 (590)
T ss_pred             CCCcEEEEEehhh-hhHHHHHHHHh-CCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeee
Confidence              56899999998 44555555433 2344889999999999999999999987  799999999999994

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.94  E-value=7e-27  Score=234.36  Aligned_cols=263  Identities=24%  Similarity=0.246  Sum_probs=192.3

Q ss_pred             ccCCccccccCcCCcccEEEeE-ecCcceEEEEEeccc--CccchHHHHHHHHHHHhcCCcccceeeeeeeec------c
Q 003786          474 TANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQ--SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL------E  544 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~  544 (795)
                      ..+|.-.+.+|.|.- .|..+. ...++.||+|++...  .....++..+|..++..++|+||++++.+|.-.      .
T Consensus        16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~   94 (369)
T KOG0665|consen   16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ   94 (369)
T ss_pred             eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence            357778889999988 555554 346899999988553  233456788999999999999999999998643      4


Q ss_pred             eeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccc
Q 003786          545 EKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMA  624 (795)
Q Consensus       545 ~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla  624 (795)
                      ..|+|||+|.. +|...+.     -.++-+.+..+..|++.|++|||+.+   |+||||||+||++..+..+||.|||++
T Consensus        95 e~y~v~e~m~~-nl~~vi~-----~elDH~tis~i~yq~~~~ik~lhs~~---IihRdLkPsnivv~~~~~lKi~dfg~a  165 (369)
T KOG0665|consen   95 EVYLVMELMDA-NLCQVIL-----MELDHETISYILYQMLCGIKHLHSAG---IIHRDLKPSNIVVNSDCTLKILDFGLA  165 (369)
T ss_pred             hHHHHHHhhhh-HHHHHHH-----HhcchHHHHHHHHHHHHHHHHHHhcc---eeecccCcccceecchhheeeccchhh
Confidence            57999999964 6666653     23566788999999999999999998   999999999999999999999999999


Q ss_pred             cccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcch-------------h---
Q 003786          625 RIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSL-------------T---  688 (795)
Q Consensus       625 ~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~-------------~---  688 (795)
                      +.-...   -..+..+.|..|.|||++-+..|...+||||+||++.||++|.--|.+.+.-++             .   
T Consensus       166 r~e~~~---~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~  242 (369)
T KOG0665|consen  166 RTEDTD---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMK  242 (369)
T ss_pred             cccCcc---cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHH
Confidence            864332   133446789999999999888899999999999999999999988775431111             0   


Q ss_pred             -HhHhHhhhccCc------cccccc-Ccccc--chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          689 -LLGHAWDLWKDD------RAWELI-DPTLQ--NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       689 -~~~~~~~~~~~~------~~~~~i-d~~l~--~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                       +...+.......      ...+.+ |....  .+.+........+++.+||..+|++|.+++++|+|-.-
T Consensus       243 qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~  313 (369)
T KOG0665|consen  243 QLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYI  313 (369)
T ss_pred             HhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCee
Confidence             000011100000      000111 11111  11112223345689999999999999999999998654

>cd00028 B_lectin Bulb-type mannose-specific lectin

Probab=99.94  E-value=3.8e-26  Score=207.64  Aligned_cols=115  Identities=44%  Similarity=0.709  Sum_probs=102.6

Q ss_pred             CccCCCCeEEeCCCeEEEEEeCCCCCCceEEEEEeccCCCeEEEecCCCCCCccCcceEEEeeCCceEEeCCCCceEEee
Q 003786           32 RFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPDTIVWVANRNSPIFDSNAVLTISNGGKLVLLNQTNGTIWSS  111 (795)
Q Consensus        32 ~~l~~~~~l~s~~g~f~lgf~~~~~~~~~~~~iw~~~~~~t~vW~an~~~p~~~~~~~l~~~~~g~lvl~~~~~~~~Wst  111 (795)
                      +.|++|++|+|+++.|++|||.+..+...+.+|||++.+.++||.||++.| ....+.|.|+.||||+|+|.+|.++|+|
T Consensus         2 ~~l~~~~~l~s~~~~f~~G~~~~~~q~~dgnlv~~~~~~~~~vW~snt~~~-~~~~~~l~l~~dGnLvl~~~~g~~vW~S   80 (116)
T cd00028           2 NPLSSGQTLVSSGSLFELGFFKLIMQSRDYNLILYKGSSRTVVWVANRDNP-SGSSCTLTLQSDGNLVIYDGSGTVVWSS   80 (116)
T ss_pred             cCcCCCCEEEeCCCcEEEecccCCCCCCeEEEEEEeCCCCeEEEECCCCCC-CCCCEEEEEecCCCeEEEcCCCcEEEEe
Confidence            578999999999999999999997765589999998876789999999998 4667899999999999999999999999


Q ss_pred             cCCCCccccEEEEccCCCeEEeecCCCCCcccceecccCCC
Q 003786          112 NLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQSFDHP  152 (795)
Q Consensus       112 ~~~~~~~~~~a~l~d~GNlvl~~~~~~~~~~~~~WqSFd~P  152 (795)
                      ++++......|+|+|||||||++.     .+.+||||||||
T Consensus        81 ~~~~~~~~~~~~L~ddGnlvl~~~-----~~~~~W~Sf~~P  116 (116)
T cd00028          81 NTTRVNGNYVLVLLDDGNLVLYDS-----DGNFLWQSFDYP  116 (116)
T ss_pred             cccCCCCceEEEEeCCCCEEEECC-----CCCEEEcCCCCC
Confidence            998634567789999999999983     578999999999

The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses.

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.94  E-value=8.5e-26  Score=230.85  Aligned_cols=199  Identities=35%  Similarity=0.486  Sum_probs=172.2

Q ss_pred             CccccccCcCCcccEEEeEecC-cceEEEEEecccCcc-chHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCC
Q 003786          477 FSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQ-GQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMP  554 (795)
Q Consensus       477 ~~~~~~LG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~  554 (795)
                      |++.+.||+|++|.||++.... ++.+|+|.+...... ..+.+.+|++.+++++|+|++++++++......++++|+++
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE   80 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence            5677899999999999998765 889999999765544 56789999999999999999999999999999999999999


Q ss_pred             CCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcccc
Q 003786          555 NKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQS  634 (795)
Q Consensus       555 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~  634 (795)
                      +++|..++.....  .+++..+..++.+++.++.+||+.+   ++|+||+|.||+++.++.++|+|||++........ .
T Consensus        81 ~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~-~  154 (225)
T smart00221       81 GGDLFDYLRKKGG--KLSEEEARFYLRQILEALEYLHSLG---IVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA-A  154 (225)
T ss_pred             CCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc-c
Confidence            9999998854322  1788899999999999999999987   99999999999999999999999999987643321 1


Q ss_pred             ccccccccccccccccc-ccCCCCcccchhhHHHHHHHHHhCCCCCCC
Q 003786          635 KTKRIVGTYGYMSPEYA-QQGLFSIKSDVFSFGVLLLETLSSKRNTDF  681 (795)
Q Consensus       635 ~~~~~~gt~~y~APE~~-~~~~~~~k~DvwSlGvil~elltG~~p~~~  681 (795)
                      ......++..|++||.+ ....++.++|+|+||+++++|++|+.||+.
T Consensus       155 ~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      155 LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence            22345678899999988 667788899999999999999999999954

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.93  E-value=7.4e-26  Score=235.48  Aligned_cols=267  Identities=22%  Similarity=0.350  Sum_probs=198.6

Q ss_pred             HHHHccCCccccccCcCCcccEEEeEec----CcceEEEEEecccCccchHHHHHHHHHHHhcC-Ccccceeeeeeeecc
Q 003786          470 VSAATANFSTENKLGEGGFGPVYKGRLL----NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQ-HRNLVRLLGCCIELE  544 (795)
Q Consensus       470 i~~~~~~~~~~~~LG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~  544 (795)
                      +....+.|..+++||+|.|++||++.+.    .++.||+|.+...  ....++.+|+++|..+. +.||+++.+++...+
T Consensus        31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t--s~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd  108 (418)
T KOG1167|consen   31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT--SSPSRILNELEMLYRLGGSDNIIKLNGCFRNND  108 (418)
T ss_pred             hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccc--cCchHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence            3445577899999999999999999753    3678999998654  34567999999999995 999999999999999


Q ss_pred             eeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECC-CCCeeeecccc
Q 003786          545 EKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDK-DMNPKISDFGM  623 (795)
Q Consensus       545 ~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~-~~~vkL~DFGl  623 (795)
                      +..+|+||+++....+++..      ++...+..+++.+++||+++|.+|   ||||||||.|+|.+. -+.-.|.|||+
T Consensus       109 ~v~ivlp~~~H~~f~~l~~~------l~~~~i~~Yl~~ll~Al~~~h~~G---IvHRDiKpsNFL~n~~t~rg~LvDFgL  179 (418)
T KOG1167|consen  109 QVAIVLPYFEHDRFRDLYRS------LSLAEIRWYLRNLLKALAHLHKNG---IVHRDIKPSNFLYNRRTQRGVLVDFGL  179 (418)
T ss_pred             eeEEEecccCccCHHHHHhc------CCHHHHHHHHHHHHHHhhhhhccC---ccccCCCccccccccccCCceEEechh
Confidence            99999999999999888732      567889999999999999999998   999999999999975 46789999999


Q ss_pred             ccccCCC---------------c-------------------c--------ccccccccccccccccccccc-CCCCccc
Q 003786          624 ARIFGGD---------------E-------------------L--------QSKTKRIVGTYGYMSPEYAQQ-GLFSIKS  660 (795)
Q Consensus       624 a~~~~~~---------------~-------------------~--------~~~~~~~~gt~~y~APE~~~~-~~~~~k~  660 (795)
                      |......               .                   .        ....-...||++|.|||++.. ...+.++
T Consensus       180 A~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qttai  259 (418)
T KOG1167|consen  180 AQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAI  259 (418)
T ss_pred             HHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCcc
Confidence            9721000               0                   0        000012469999999998865 6789999


Q ss_pred             chhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhh-----------------hccCccccc---------ccC-cc----
Q 003786          661 DVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWD-----------------LWKDDRAWE---------LID-PT----  709 (795)
Q Consensus       661 DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~---------~id-~~----  709 (795)
                      ||||.|||++-+++++.||-........+...+..                 .|....+..         -++ ..    
T Consensus       260 Diws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~  339 (418)
T KOG1167|consen  260 DIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKS  339 (418)
T ss_pred             ceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccc
Confidence            99999999999999999986544332222211100                 111011000         010 00    


Q ss_pred             ----ccc-hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          710 ----LQN-EASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       710 ----l~~-~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                          +.. ......+..+++++.+|+..||.+|.|+++.|+|-
T Consensus       340 ~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHp  382 (418)
T KOG1167|consen  340 RQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHP  382 (418)
T ss_pred             cccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCc
Confidence                001 11122334678999999999999999999999863

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.92  E-value=6.9e-26  Score=221.72  Aligned_cols=252  Identities=19%  Similarity=0.344  Sum_probs=187.0

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhc-CCcccceeeee-eeecceeeEEe
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKL-QHRNLVRLLGC-CIELEEKILIY  550 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~-~~~~~~~~lv~  550 (795)
                      .+.|.+.+.||+|.||.+-+++++ +.+.+++|.+.+. .....+|.+|...--.| .|.||+.-|+. |+..+..++++
T Consensus        23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~q  101 (378)
T KOG1345|consen   23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQ  101 (378)
T ss_pred             hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEee
Confidence            356999999999999999999875 4788999988654 34567899998876556 58999987764 67777788999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEEC--CCCCeeeeccccccccC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLD--KDMNPKISDFGMARIFG  628 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~--~~~~vkL~DFGla~~~~  628 (795)
                      ||+|.|+|..-+..    .-+.+....+++.|++.||.|+|+++   +||||||.+||||-  +..+|||+|||+.+..+
T Consensus       102 E~aP~gdL~snv~~----~GigE~~~K~v~~ql~SAi~fMHskn---lVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g  174 (378)
T KOG1345|consen  102 EFAPRGDLRSNVEA----AGIGEANTKKVFAQLLSAIEFMHSKN---LVHRDLKAENILIFDADFYRVKLCDFGLTRKVG  174 (378)
T ss_pred             ccCccchhhhhcCc----ccccHHHHHHHHHHHHHHHHHhhccc---hhhcccccceEEEecCCccEEEeeecccccccC
Confidence            99999999877633    34778888999999999999999998   99999999999993  34589999999987643


Q ss_pred             CCccccccccccccccccccccccc---C--CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccc
Q 003786          629 GDELQSKTKRIVGTYGYMSPEYAQQ---G--LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAW  703 (795)
Q Consensus       629 ~~~~~~~~~~~~gt~~y~APE~~~~---~--~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~  703 (795)
                      .     .......+..|.|||....   +  ...+.+|||.||+++|.+++|..|+......+..+.  .|..|......
T Consensus       175 ~-----tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~--~~~~w~~rk~~  247 (378)
T KOG1345|consen  175 T-----TVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYW--EWEQWLKRKNP  247 (378)
T ss_pred             c-----eehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHH--HHHHHhcccCc
Confidence            2     1223445678999997632   2  246789999999999999999999985444333332  23333333222


Q ss_pred             cccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          704 ELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       704 ~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .+  |+    .-......+.++..+-|..+|++|=-..++.++
T Consensus       248 ~~--P~----~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~  284 (378)
T KOG1345|consen  248 AL--PK----KFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKM  284 (378)
T ss_pred             cC--ch----hhcccCHHHHHHHHHhcCCcccccchhHHHHHH
Confidence            11  11    111234566778888999999999555555444

>smart00108 B_lectin Bulb-type mannose-specific lectin

Probab=99.92  E-value=1.7e-24  Score=196.35  Aligned_cols=113  Identities=44%  Similarity=0.721  Sum_probs=99.7

Q ss_pred             CccCCCCeEEeCCCeEEEEEeCCCCCCceEEEEEeccCCCeEEEecCCCCCCccCcceEEEeeCCceEEeCCCCceEEee
Q 003786           32 RFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPDTIVWVANRNSPIFDSNAVLTISNGGKLVLLNQTNGTIWSS  111 (795)
Q Consensus        32 ~~l~~~~~l~s~~g~f~lgf~~~~~~~~~~~~iw~~~~~~t~vW~an~~~p~~~~~~~l~~~~~g~lvl~~~~~~~~Wst  111 (795)
                      +.|..|++|+|+++.|++|||.+..+ ..+.+|||+..+.++||+|||+.|+.+ .+.|.|+.||||||+|.+|.+||+|
T Consensus         2 ~~l~~~~~l~s~~~~f~~G~~~~~~q-~dgnlV~~~~~~~~~vW~snt~~~~~~-~~~l~l~~dGnLvl~~~~g~~vW~S   79 (114)
T smart00108        2 NTLSSGQTLVSGNSLFELGFFTLIMQ-NDYNLILYKSSSRTVVWVANRDNPVSD-SCTLTLQSDGNLVLYDGDGRVVWSS   79 (114)
T ss_pred             cccCCCCEEecCCCcEeeeccccCCC-CCEEEEEEECCCCcEEEECCCCCCCCC-CEEEEEeCCCCEEEEeCCCCEEEEe
Confidence            56889999999999999999998755 678999998866789999999999854 4899999999999999999999999


Q ss_pred             cCCCCccccEEEEccCCCeEEeecCCCCCcccceecccCC
Q 003786          112 NLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQSFDH  151 (795)
Q Consensus       112 ~~~~~~~~~~a~l~d~GNlvl~~~~~~~~~~~~~WqSFd~  151 (795)
                      +++.......|+|+|||||||++     ..+.+|||||||
T Consensus        80 ~t~~~~~~~~~~L~ddGnlvl~~-----~~~~~~W~Sf~~  114 (114)
T smart00108       80 NTTGANGNYVLVLLDDGNLVIYD-----SDGNFLWQSFDY  114 (114)
T ss_pred             cccCCCCceEEEEeCCCCEEEEC-----CCCCEEeCCCCC
Confidence            99744456678999999999998     456899999997

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.91  E-value=2.4e-25  Score=269.50  Aligned_cols=197  Identities=19%  Similarity=0.231  Sum_probs=138.5

Q ss_pred             hcCC-cccceeeeee-------eecceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcE
Q 003786          527 KLQH-RNLVRLLGCC-------IELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRV  598 (795)
Q Consensus       527 ~l~h-~niv~l~~~~-------~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i  598 (795)
                      .++| +||++++++|       .+....++++|++ +++|.++|...  ...+++.++..++.||++||.|||+++   |
T Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~g---I  101 (793)
T PLN00181         28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP--DRSVDAFECFHVFRQIVEIVNAAHSQG---I  101 (793)
T ss_pred             hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc--cccccHHHHHHHHHHHHHHHHHHHhCC---e
Confidence            4556 6888888887       2334567788987 55999998532  345889999999999999999999988   9


Q ss_pred             EeccCCCCcEEECC-------------------CCCeeeeccccccccCCCcc--------------ccccccccccccc
Q 003786          599 IHRDLKASNILLDK-------------------DMNPKISDFGMARIFGGDEL--------------QSKTKRIVGTYGY  645 (795)
Q Consensus       599 iHrDikp~NIll~~-------------------~~~vkL~DFGla~~~~~~~~--------------~~~~~~~~gt~~y  645 (795)
                      +||||||+||||+.                   ++.+||+|||+++.......              ........||+.|
T Consensus       102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y  181 (793)
T PLN00181        102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY  181 (793)
T ss_pred             eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence            99999999999965                   44566666666653211000              0001124578999


Q ss_pred             ccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhhHHHHHHHHHH
Q 003786          646 MSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINV  725 (795)
Q Consensus       646 ~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l  725 (795)
                      ||||++.+..|+.++|||||||+||||++|..|+.....   .......         ..+.+..     .........+
T Consensus       182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~---~~~~~~~---------~~~~~~~-----~~~~~~~~~~  244 (793)
T PLN00181        182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR---TMSSLRH---------RVLPPQI-----LLNWPKEASF  244 (793)
T ss_pred             EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH---HHHHHHH---------hhcChhh-----hhcCHHHHHH
Confidence            999999999999999999999999999998877542110   0000000         0011110     1112334578


Q ss_pred             HHhhccCCCCCCCCHHHHHHH
Q 003786          726 GLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       726 i~~cL~~dP~~RPt~~evl~~  746 (795)
                      +.+||+.+|.+||++.||+++
T Consensus       245 ~~~~L~~~P~~Rps~~eil~h  265 (793)
T PLN00181        245 CLWLLHPEPSCRPSMSELLQS  265 (793)
T ss_pred             HHHhCCCChhhCcChHHHhhc
Confidence            889999999999999999985

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.90  E-value=1.1e-23  Score=207.35  Aligned_cols=166  Identities=20%  Similarity=0.143  Sum_probs=124.7

Q ss_pred             CChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccccc
Q 003786          556 KSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK  635 (795)
Q Consensus       556 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~  635 (795)
                      |+|.+++...  ...+++..+..++.||++||.|||+.+         ||+|||++.++.+|+  ||++.......    
T Consensus         1 GsL~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~lH~~~---------kp~Nil~~~~~~~~~--fG~~~~~~~~~----   63 (176)
T smart00750        1 VSLADILEVR--GRPLNEEEIWAVCLQCLRALRELHRQA---------KSGNILLTWDGLLKL--DGSVAFKTPEQ----   63 (176)
T ss_pred             CcHHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhcC---------CcccEeEcCccceee--ccceEeecccc----
Confidence            6788888432  345899999999999999999999875         999999999999999  99998654321    


Q ss_pred             ccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhh
Q 003786          636 TKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEAS  715 (795)
Q Consensus       636 ~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~  715 (795)
                         ..||+.|||||++.+..++.++|||||||++|||++|+.|+.........+....... ...      ++. .....
T Consensus        64 ---~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~-~~~------~~~-~~~~~  132 (176)
T smart00750       64 ---SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGM-PAD------DPR-DRSNL  132 (176)
T ss_pred             ---CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHh-ccC------Ccc-ccccH
Confidence               2589999999999999999999999999999999999999865432221111111000 000      000 00111


Q ss_pred             HHHHH--HHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          716 YLILN--RYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       716 ~~~~~--~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      .....  .+.+++.+||+.+|++||++.|+++++..
T Consensus       133 ~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~  168 (176)
T smart00750      133 ESVSAARSFADFMRVCASRLPQRREAANHYLAHCRA  168 (176)
T ss_pred             HHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHH
Confidence            22222  68899999999999999999999998754

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.89  E-value=4.2e-23  Score=222.80  Aligned_cols=177  Identities=20%  Similarity=0.270  Sum_probs=135.4

Q ss_pred             HHHHccCCccccccCcCCcccEEEeEec--CcceEEEEEeccc-----CccchHHHHHHHHHHHhcCCcccce-eeeeee
Q 003786          470 VSAATANFSTENKLGEGGFGPVYKGRLL--NGQEVAVKRLSSQ-----SGQGQEEFKNEIKLIAKLQHRNLVR-LLGCCI  541 (795)
Q Consensus       470 i~~~~~~~~~~~~LG~G~~g~Vy~~~~~--~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~-l~~~~~  541 (795)
                      +.....+|.+.+.||+|+||+||+|++.  +++.+|||++...     .....+.+.+|+++|++++|+|+++ +++.  
T Consensus        13 ~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~--   90 (365)
T PRK09188         13 IPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT--   90 (365)
T ss_pred             cccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc--
Confidence            3455678999999999999999999864  4777899987533     1123466899999999999999985 4432  


Q ss_pred             ecceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccC-CCCcEEECCCCCeeeec
Q 003786          542 ELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDL-KASNILLDKDMNPKISD  620 (795)
Q Consensus       542 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDi-kp~NIll~~~~~vkL~D  620 (795)
                        ...++||||+++++|....    ..      ....++.+++++|.|||+.+   |+|||| ||+|||++.++.+||+|
T Consensus        91 --~~~~LVmE~~~G~~L~~~~----~~------~~~~~~~~i~~aL~~lH~~g---IiHrDL~KP~NILv~~~~~ikLiD  155 (365)
T PRK09188         91 --GKDGLVRGWTEGVPLHLAR----PH------GDPAWFRSAHRALRDLHRAG---ITHNDLAKPQNWLMGPDGEAAVID  155 (365)
T ss_pred             --CCcEEEEEccCCCCHHHhC----cc------chHHHHHHHHHHHHHHHHCC---CeeCCCCCcceEEEcCCCCEEEEE
Confidence              4579999999999996321    10      12467889999999999988   999999 99999999999999999


Q ss_pred             cccccccCCCccccc------ccccccccccccccccccC------CCCcccchh
Q 003786          621 FGMARIFGGDELQSK------TKRIVGTYGYMSPEYAQQG------LFSIKSDVF  663 (795)
Q Consensus       621 FGla~~~~~~~~~~~------~~~~~gt~~y~APE~~~~~------~~~~k~Dvw  663 (795)
                      ||+++.+........      .....+++.|+|||.+...      ..+..+|-|
T Consensus       156 FGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW  210 (365)
T PRK09188        156 FQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW  210 (365)
T ss_pred             CccceecccCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence            999997654321111      1346788899999988542      233446666

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.87  E-value=1.4e-21  Score=211.45  Aligned_cols=257  Identities=24%  Similarity=0.273  Sum_probs=191.3

Q ss_pred             CCccccccCcCCcccEEEeEecCc--ceEEEEEecccCccchHHHHHHHHHHHhcCC----cccceeeeee-eecceeeE
Q 003786          476 NFSTENKLGEGGFGPVYKGRLLNG--QEVAVKRLSSQSGQGQEEFKNEIKLIAKLQH----RNLVRLLGCC-IELEEKIL  548 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~~~--~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~-~~~~~~~l  548 (795)
                      +|.+.++||+|+||.||++.....  ..+|+|............+..|+.++..+.+    +++..+++.. ......++
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i   98 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI   98 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence            799999999999999999986553  5799998876544433478999999999973    6889999988 47778899


Q ss_pred             EeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCC-----CCeeeecccc
Q 003786          549 IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKD-----MNPKISDFGM  623 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~-----~~vkL~DFGl  623 (795)
                      ||+.+ |.+|.++..... .+.++...+..++.|++.+|.+||+.|   ++||||||+|+++...     -.+.|.|||+
T Consensus        99 VM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~~G---~iHRDiKp~N~~~g~~~~~~~~~~~llDfGl  173 (322)
T KOG1164|consen   99 VMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHSKG---FIHRDIKPENFVVGQSSRSEVRTLYLLDFGL  173 (322)
T ss_pred             EEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHhcC---cccCCcCHHHeeecCCCCcccceEEEEecCC
Confidence            99976 778888764444 567899999999999999999999998   9999999999999865     3589999999


Q ss_pred             ccccC--CCc----ccc-c-ccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcch-hHhHhHh
Q 003786          624 ARIFG--GDE----LQS-K-TKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSL-TLLGHAW  694 (795)
Q Consensus       624 a~~~~--~~~----~~~-~-~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~-~~~~~~~  694 (795)
                      ++.+.  ...    ... . ...+.||..|+++....+...+.+.|+||++.++.|++.|..|+........ .....  
T Consensus       174 ar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~--  251 (322)
T KOG1164|consen  174 ARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEK--  251 (322)
T ss_pred             CccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHH--
Confidence            98322  111    111 1 2345699999999999999999999999999999999999999865432211 11100  


Q ss_pred             hhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          695 DLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       695 ~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                           .........     .....+..+.++...+-..+..++|....+...|..
T Consensus       252 -----~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~  296 (322)
T KOG1164|consen  252 -----DPRKLLTDR-----FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKD  296 (322)
T ss_pred             -----Hhhhhcccc-----ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHH
Confidence                 000001110     111112234444444555899999999999888755

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.87  E-value=1e-20  Score=203.72  Aligned_cols=260  Identities=30%  Similarity=0.390  Sum_probs=198.1

Q ss_pred             CccccccCcCCcccEEEeEecCcceEEEEEecccCcc---chHHHHHHHHHHHhcCCc-ccceeeeeeeecceeeEEeec
Q 003786          477 FSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQ---GQEEFKNEIKLIAKLQHR-NLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       477 ~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~~lv~E~  552 (795)
                      |.+.+.||.|+||.||++...  ..+++|.+......   ....+.+|+.+++.+.|+ +++++++.+......++++|+
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~   79 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY   79 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence            677889999999999999876  78999998765433   367899999999999988 799999999777778999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCC-CeeeeccccccccCCCc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDM-NPKISDFGMARIFGGDE  631 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~-~vkL~DFGla~~~~~~~  631 (795)
                      +.++++..++........+.......++.|++.++.|+|..+   ++||||||+||+++..+ .++++|||++.......
T Consensus        80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~---~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~  156 (384)
T COG0515          80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG---IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG  156 (384)
T ss_pred             CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence            999999966633221135788899999999999999999998   99999999999999998 79999999998654433


Q ss_pred             ccc----ccccccccccccccccccc---CCCCcccchhhHHHHHHHHHhCCCCCCCCCCc--chhHhHhHhhhccCccc
Q 003786          632 LQS----KTKRIVGTYGYMSPEYAQQ---GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTN--SLTLLGHAWDLWKDDRA  702 (795)
Q Consensus       632 ~~~----~~~~~~gt~~y~APE~~~~---~~~~~k~DvwSlGvil~elltG~~p~~~~~~~--~~~~~~~~~~~~~~~~~  702 (795)
                      ...    ......|+..|+|||.+..   ..+....|+||+|++++++++|..|+......  .............. ..
T Consensus       157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~  235 (384)
T COG0515         157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP-SL  235 (384)
T ss_pred             ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCc-cc
Confidence            221    2456789999999999987   57899999999999999999999996554431  11111111111111 00


Q ss_pred             ccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          703 WELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       703 ~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .....+.    ........+.+++..++..+|..|.++.+....
T Consensus       236 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~  275 (384)
T COG0515         236 ASPLSPS----NPELISKAASDLLKKLLAKDPKNRLSSSSDLSH  275 (384)
T ss_pred             ccccCcc----ccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence            0000000    002223466788889999999999999887764

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.86  E-value=2.9e-22  Score=230.39  Aligned_cols=254  Identities=20%  Similarity=0.260  Sum_probs=190.1

Q ss_pred             ccccccCcCCcccEEEeEecC-cceEEEEEeccc--Cccch----HHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          478 STENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQ--SGQGQ----EEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       478 ~~~~~LG~G~~g~Vy~~~~~~-~~~vavK~~~~~--~~~~~----~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      ...+.+|.|.+|.|+...... .+.++.|.+...  .....    ..+..|+.+=..++|||++..+..+.+.....-+|
T Consensus       321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m  400 (601)
T KOG0590|consen  321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM  400 (601)
T ss_pred             CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence            456789999999888876433 333444433211  11111    12556777778899999999888877777766669


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      |||++ +|..++..   ...+...++..++.|++.|+.|+|..|   |.||||||+|+++..+|.+||+|||.+..+.-.
T Consensus       401 E~~~~-Dlf~~~~~---~~~~~~~e~~c~fKqL~~Gv~y~h~~G---iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~  473 (601)
T KOG0590|consen  401 EYCPY-DLFSLVMS---NGKLTPLEADCFFKQLLRGVKYLHSMG---LAHRDLKLENLLVTENGILKIIDFGAASVFRYP  473 (601)
T ss_pred             hcccH-HHHHHHhc---ccccchhhhhHHHHHHHHHHHHHHhcC---ceeccCccccEEEecCCceEEeecCcceeeccC
Confidence            99999 88888733   346788899999999999999999999   999999999999999999999999999876543


Q ss_pred             ccc--ccccccccccccccccccccCCCCc-ccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccC
Q 003786          631 ELQ--SKTKRIVGTYGYMSPEYAQQGLFSI-KSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID  707 (795)
Q Consensus       631 ~~~--~~~~~~~gt~~y~APE~~~~~~~~~-k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id  707 (795)
                      ...  ......+|+..|+|||++.+..|++ ..||||.|+++..|++|+.||-.....+..+.....       ....-.
T Consensus       474 ~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~-------~~~~~~  546 (601)
T KOG0590|consen  474 WEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNY-------SDQRNI  546 (601)
T ss_pred             cchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhcc-------cccccc
Confidence            332  4456678999999999999998875 579999999999999999998765544332211100       000000


Q ss_pred             ccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 003786          708 PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVS  745 (795)
Q Consensus       708 ~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  745 (795)
                      ..-........+.+...++.+||+.+|.+|.|+++|++
T Consensus       547 ~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~  584 (601)
T KOG0590|consen  547 FEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN  584 (601)
T ss_pred             ccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence            11112344556677889999999999999999999987

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.84  E-value=1.8e-20  Score=188.88  Aligned_cols=206  Identities=22%  Similarity=0.306  Sum_probs=173.6

Q ss_pred             HccCCccccccCcCCcccEEEeE-ecCcceEEEEEecccCccchHHHHHHHHHHHhcC-CcccceeeeeeeecceeeEEe
Q 003786          473 ATANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQ-HRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~  550 (795)
                      ..-.|.++++||+|.||+.+.|+ +-+++.||||.....+  ...+++.|++..+.|. .++|...|.+-.++-+..||+
T Consensus        26 VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVi  103 (449)
T KOG1165|consen   26 VGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVI  103 (449)
T ss_pred             ecccceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhh
Confidence            34689999999999999999997 5579999999876543  3456888999988885 799999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCC-----Ceeeecccccc
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDM-----NPKISDFGMAR  625 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~-----~vkL~DFGla~  625 (795)
                      |.+ |-||+++..-..  ..++...+..++.|++.-++|+|+++   +|.|||||+|+||...+     .|.|+|||+|+
T Consensus       104 dLL-GPSLEDLFD~Cg--R~FSvKTV~miA~Qmi~rie~vH~k~---LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK  177 (449)
T KOG1165|consen  104 DLL-GPSLEDLFDLCG--RRFSVKTVAMIAKQMITRIEYVHEKD---LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAK  177 (449)
T ss_pred             hhh-CcCHHHHHHHhc--CcccHHhHHHHHHHHHHHHHHHHhcc---eeecccCccceeecCCCCCCCceEEEEeccchh
Confidence            987 778888764332  24788999999999999999999998   99999999999997543     48999999999


Q ss_pred             ccCCCcc-----cccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcc
Q 003786          626 IFGGDEL-----QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNS  686 (795)
Q Consensus       626 ~~~~~~~-----~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~  686 (795)
                      .+.....     ....+...||..||+=-...+...+.+-|+=|||=+++..|-|..||.+.....
T Consensus       178 ~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~t  243 (449)
T KOG1165|consen  178 EYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADT  243 (449)
T ss_pred             hhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcc
Confidence            8754332     234456789999999988889999999999999999999999999998765433

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.84  E-value=3.3e-21  Score=193.61  Aligned_cols=171  Identities=16%  Similarity=0.153  Sum_probs=134.9

Q ss_pred             HccCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHH---------HHHHHHHHHhcCCcccceeeeeeeec
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEE---------FKNEIKLIAKLQHRNLVRLLGCCIEL  543 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~---------~~~E~~~l~~l~h~niv~l~~~~~~~  543 (795)
                      ...+|+..+.||.|+||.||++.. +++.+|||++..........         +.+|++.+.+++||+|..+.+++...
T Consensus        29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~  107 (232)
T PRK10359         29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA  107 (232)
T ss_pred             hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence            358899999999999999999765 67789999997654333332         67999999999999999999886643


Q ss_pred             --------ceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCC
Q 003786          544 --------EEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMN  615 (795)
Q Consensus       544 --------~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~  615 (795)
                              ...++||||++|.+|.++..       +++    ....+++.+|..+|+.+   ++||||||+||+++.+| 
T Consensus       108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~----~~~~~i~~~l~~lH~~g---i~H~Dikp~Nili~~~g-  172 (232)
T PRK10359        108 ERKTLRYAHTYIMLIEYIEGVELNDMPE-------ISE----DVKAKIKASIESLHQHG---MVSGDPHKGNFIVSKNG-  172 (232)
T ss_pred             ccccccccCCeEEEEEEECCccHHHhhh-------ccH----HHHHHHHHHHHHHHHcC---CccCCCChHHEEEeCCC-
Confidence                    35789999999999977631       222    34568999999999998   99999999999999998 


Q ss_pred             eeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHH
Q 003786          616 PKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETL  673 (795)
Q Consensus       616 vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ell  673 (795)
                      ++|+|||..........   .           ..+.....|..++|+|+||+++..+.
T Consensus       173 i~liDfg~~~~~~e~~a---~-----------d~~vler~y~~~~di~~lg~~~~~~~  216 (232)
T PRK10359        173 LRIIDLSGKRCTAQRKA---K-----------DRIDLERHYGIKNEIKDLGYYLLIYK  216 (232)
T ss_pred             EEEEECCCcccccchhh---H-----------HHHHHHhHhcccccccceeEeehHHH
Confidence            99999999875422111   0           11344556778999999999987654

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.84  E-value=6.5e-21  Score=184.07  Aligned_cols=203  Identities=22%  Similarity=0.294  Sum_probs=167.4

Q ss_pred             HccCCccccccCcCCcccEEEeE-ecCcceEEEEEecccCccchHHHHHHHHHHHhcCC-cccceeeeeeeecceeeEEe
Q 003786          473 ATANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQH-RNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~  550 (795)
                      ...+|.++++||.|+||.+|.|. ..+|.+||||..+...  ...++..|..+...|++ ..|..+..+..+.....+||
T Consensus        13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a--~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM   90 (341)
T KOG1163|consen   13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA--KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM   90 (341)
T ss_pred             eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC--CCcchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence            35789999999999999999997 4579999999986543  33467889999999975 67888888899999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCC---CCeeeecccccccc
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKD---MNPKISDFGMARIF  627 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~---~~vkL~DFGla~~~  627 (795)
                      +.+ |-+|+++..-..+  .++-..++-++.|++.-++|+|.++   +|||||||+|+|..-+   ..+.|+|||+++.+
T Consensus        91 dLL-GPsLEdLfnfC~R--~ftmkTvLMLaDQml~RiEyvH~r~---fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky  164 (341)
T KOG1163|consen   91 DLL-GPSLEDLFNFCSR--RFTMKTVLMLADQMLSRIEYVHLRN---FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKY  164 (341)
T ss_pred             ecc-CccHHHHHHHHhh--hhhHHhHHHHHHHHHHHHHHHHhhc---cccccCCccceeeccccccceEEEEeccchhhh
Confidence            987 7788877743333  3667788999999999999999998   9999999999999644   46899999999976


Q ss_pred             CCCcc-----cccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCC
Q 003786          628 GGDEL-----QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSN  683 (795)
Q Consensus       628 ~~~~~-----~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~  683 (795)
                      .....     ........||..|.+--.+-+...+.+-|+=|+|.+|..+..|..||.+..
T Consensus       165 ~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglk  225 (341)
T KOG1163|consen  165 RDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLK  225 (341)
T ss_pred             ccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccc
Confidence            43221     223445789999998777777778889999999999999999999998754

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.83  E-value=5.8e-21  Score=186.99  Aligned_cols=246  Identities=24%  Similarity=0.356  Sum_probs=188.0

Q ss_pred             CccccccCcCCcccEEEeEecCcceEEEEEeccc--CccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCC
Q 003786          477 FSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQ--SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMP  554 (795)
Q Consensus       477 ~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~  554 (795)
                      ..+..+|.+...|..|+|++. |..+++|++...  .....+.|..|.-.|+.+.||||+.+++.|....+..++..||+
T Consensus       192 lnl~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp  270 (448)
T KOG0195|consen  192 LNLITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMP  270 (448)
T ss_pred             hhhhhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeecc
Confidence            445568999999999999984 456667777543  22334678999999999999999999999999999999999999


Q ss_pred             CCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEe-ccCCCCcEEECCCCCeeee--ccccccccCCCc
Q 003786          555 NKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIH-RDLKASNILLDKDMNPKIS--DFGMARIFGGDE  631 (795)
Q Consensus       555 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH-rDikp~NIll~~~~~vkL~--DFGla~~~~~~~  631 (795)
                      .|+|...++... .-.++..++.+++.+|++|++|||+..  +++- --|....+++|++...+|.  |--++..     
T Consensus       271 ~gslynvlhe~t-~vvvd~sqav~faldiargmaflhsle--p~ipr~~lns~hvmidedltarismad~kfsfq-----  342 (448)
T KOG0195|consen  271 FGSLYNVLHEQT-SVVVDHSQAVRFALDIARGMAFLHSLE--PMIPRFYLNSKHVMIDEDLTARISMADTKFSFQ-----  342 (448)
T ss_pred             chHHHHHHhcCc-cEEEecchHHHHHHHHHhhHHHHhhcc--hhhhhhhcccceEEecchhhhheecccceeeee-----
Confidence            999999996543 345777899999999999999999987  3443 4588999999999887764  3222211     


Q ss_pred             ccccccccccccccccccccccCCCC---cccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCc
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQGLFS---IKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP  708 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~~~~~---~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~  708 (795)
                          .....-.|.||+||.++.++-+   .++|+|||++++|||.|...||.....-+...-              +.-.
T Consensus       343 ----e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmk--------------iale  404 (448)
T KOG0195|consen  343 ----EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMK--------------IALE  404 (448)
T ss_pred             ----ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhh--------------hhhc
Confidence                1112346889999999876543   578999999999999999999865432222110              1111


Q ss_pred             cccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          709 TLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       709 ~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      .++-.+++.....+.+++.-|+..||.+||.+..|+-.|+.
T Consensus       405 glrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilek  445 (448)
T KOG0195|consen  405 GLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEK  445 (448)
T ss_pred             cccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHH
Confidence            23334555566778899999999999999999999998876

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.82  E-value=3.3e-20  Score=184.34  Aligned_cols=139  Identities=18%  Similarity=0.189  Sum_probs=108.5

Q ss_pred             ccccCcCCcccEEEeEecCcceEEEEEecccCcc--c-------hH-----------------HHHHHHHHHHhcCCccc
Q 003786          480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQ--G-------QE-----------------EFKNEIKLIAKLQHRNL  533 (795)
Q Consensus       480 ~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~-------~~-----------------~~~~E~~~l~~l~h~ni  533 (795)
                      ...||+|+||.||+|...+|+.||||+++.....  .       ..                 ...+|+++|.++.++++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v   81 (190)
T cd05147           2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI   81 (190)
T ss_pred             CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            4689999999999999878999999999654211  1       11                 22359999999988877


Q ss_pred             ceeeeeeeecceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHH-HhcCCCcEEeccCCCCcEEECC
Q 003786          534 VRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYL-HQYSRLRVIHRDLKASNILLDK  612 (795)
Q Consensus       534 v~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~L-H~~~~~~iiHrDikp~NIll~~  612 (795)
                      .....+.  ....++||||++++++...+.   ....++...+..++.|++.+|.++ |+.+   |+||||||+|||++ 
T Consensus        82 ~~p~~~~--~~~~~iVmE~i~g~~l~~~~~---~~~~~~~~~~~~i~~qi~~~L~~l~H~~g---iiHrDlkP~NIli~-  152 (190)
T cd05147          82 PCPEPIL--LKSHVLVMEFIGDDGWAAPRL---KDAPLSESKARELYLQVIQIMRILYQDCR---LVHADLSEYNLLYH-  152 (190)
T ss_pred             CCCcEEE--ecCCEEEEEEeCCCCCcchhh---hcCCCCHHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEE-
Confidence            4433322  223489999999987765432   224578889999999999999999 6777   99999999999998 


Q ss_pred             CCCeeeecccccccc
Q 003786          613 DMNPKISDFGMARIF  627 (795)
Q Consensus       613 ~~~vkL~DFGla~~~  627 (795)
                      ++.++|+|||++...
T Consensus       153 ~~~v~LiDFG~a~~~  167 (190)
T cd05147         153 DGKLYIIDVSQSVEH  167 (190)
T ss_pred             CCcEEEEEccccccC
Confidence            578999999999754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.81  E-value=9.4e-21  Score=207.23  Aligned_cols=232  Identities=23%  Similarity=0.226  Sum_probs=180.5

Q ss_pred             ccCcCCcccEEEeEe----cCcceEEEEEecccCccc--hHHHHHHHHHHHhcC-CcccceeeeeeeecceeeEEeecCC
Q 003786          482 KLGEGGFGPVYKGRL----LNGQEVAVKRLSSQSGQG--QEEFKNEIKLIAKLQ-HRNLVRLLGCCIELEEKILIYEYMP  554 (795)
Q Consensus       482 ~LG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~E~~~  554 (795)
                      .+|+|.||.|++++.    ..++-+|+|++.+.....  ......|..++...+ ||.+|++...++.+...++++++..
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r   80 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR   80 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence            479999999999853    347779999987653221  125567888999997 9999999999999999999999999


Q ss_pred             CCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcccc
Q 003786          555 NKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQS  634 (795)
Q Consensus       555 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~  634 (795)
                      +|.|...+.   ....+.+.....+...++.++.++|+.+   |+|||+|++||+++.+|++|+.|||+.+..-...   
T Consensus        81 gg~lft~l~---~~~~f~~~~~~~~~aelaLald~lh~l~---iiyrd~k~enilld~~Ghi~~tdfglske~v~~~---  151 (612)
T KOG0603|consen   81 GGDLFTRLS---KEVMFDELDVAFYLAELALALDHLHKLG---IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK---  151 (612)
T ss_pred             cchhhhccc---cCCchHHHHHHHHHHHHHHHHhhcchhH---HHHhcccccceeecccCccccCCchhhhHhHhhh---
Confidence            999987773   3344666777788888999999999998   9999999999999999999999999998653222   


Q ss_pred             cccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchh
Q 003786          635 KTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEA  714 (795)
Q Consensus       635 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~  714 (795)
                         ..+||..|||||+++  .+..++|.||||++++||++|..||..   .....+                 .......
T Consensus       152 ---~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~---~~~~~I-----------------l~~~~~~  206 (612)
T KOG0603|consen  152 ---IACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG---DTMKRI-----------------LKAELEM  206 (612)
T ss_pred             ---hcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch---HHHHHH-----------------hhhccCC
Confidence               128999999999998  678899999999999999999999864   111000                 0011223


Q ss_pred             hHHHHHHHHHHHHhhccCCCCCCCCH--HHHHHHH
Q 003786          715 SYLILNRYINVGLLCVQEDAADRPTM--FEVVSML  747 (795)
Q Consensus       715 ~~~~~~~l~~li~~cL~~dP~~RPt~--~evl~~L  747 (795)
                      +........+++..++..+|..|--.  ..+.+++
T Consensus       207 p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik  241 (612)
T KOG0603|consen  207 PRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIK  241 (612)
T ss_pred             chhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHh
Confidence            44455566678888888999998754  3444443

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.81  E-value=2.1e-20  Score=213.42  Aligned_cols=250  Identities=19%  Similarity=0.168  Sum_probs=181.7

Q ss_pred             CCccccccCcCCcccEEEeEecCcceEEEEEecccC-ccchHHHHHHHHH--HHhcCCcccceeeeeeeecceeeEEeec
Q 003786          476 NFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQS-GQGQEEFKNEIKL--IAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~--l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      ++...+.||++.|=+|.++++.+|. |+||++-+.. ....+.++++++-  ...++|||.+++...-......|||-+|
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy  102 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY  102 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence            6888899999999999999987777 9999986654 3445556554444  4455899999998887778888999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccC--C-
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG--G-  629 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~--~-  629 (795)
                      ..+ +|.+.+   ..+..+...+...|+.|++.||..+|..+   |+|+|||.+||||+.-..+.|+||.-.+...  . 
T Consensus       103 vkh-nLyDRl---STRPFL~~iEKkWiaFQLL~al~qcH~~g---VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeD  175 (1431)
T KOG1240|consen  103 VKH-NLYDRL---STRPFLVLIEKKWIAFQLLKALSQCHKLG---VCHGDIKSENILITSWNWLYLTDFASFKPTYLPED  175 (1431)
T ss_pred             Hhh-hhhhhh---ccchHHHHHHHHHHHHHHHHHHHHHHHcC---ccccccccceEEEeeechhhhhcccccCCccCCCC
Confidence            876 455555   45677888889999999999999999998   9999999999999999999999998876431  1 


Q ss_pred             --Cccccccccccccccccccccccc----------CC-CCcccchhhHHHHHHHHHhC-CCCCCCCCCcchhHhHhHhh
Q 003786          630 --DELQSKTKRIVGTYGYMSPEYAQQ----------GL-FSIKSDVFSFGVLLLETLSS-KRNTDFSNTNSLTLLGHAWD  695 (795)
Q Consensus       630 --~~~~~~~~~~~gt~~y~APE~~~~----------~~-~~~k~DvwSlGvil~elltG-~~p~~~~~~~~~~~~~~~~~  695 (795)
                        .++.-...+...-..|.|||.+..          .. .+++.||||+||+++||++- +++|+..     +++.+...
T Consensus       176 NPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS-----QL~aYr~~  250 (1431)
T KOG1240|consen  176 NPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS-----QLLAYRSG  250 (1431)
T ss_pred             CcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH-----HHHhHhcc
Confidence              111111122223346999997633          12 67899999999999999975 6666431     11111100


Q ss_pred             -hccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          696 -LWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       696 -~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                       ....+...+.|           +...+.+++..|++.||++|.++++.|+.-.+
T Consensus       251 ~~~~~e~~Le~I-----------ed~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG  294 (1431)
T KOG1240|consen  251 NADDPEQLLEKI-----------EDVSLRNLILSMIQRDPSKRLSAEDYLQKYRG  294 (1431)
T ss_pred             CccCHHHHHHhC-----------cCccHHHHHHHHHccCchhccCHHHHHHhhhc
Confidence             00001111111           12267789999999999999999999997555

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.80  E-value=2.6e-19  Score=178.51  Aligned_cols=141  Identities=21%  Similarity=0.220  Sum_probs=111.3

Q ss_pred             ccccCcCCcccEEEeEecCcceEEEEEecccCccc--------------------------hHHHHHHHHHHHhcCCccc
Q 003786          480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQG--------------------------QEEFKNEIKLIAKLQHRNL  533 (795)
Q Consensus       480 ~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------------------------~~~~~~E~~~l~~l~h~ni  533 (795)
                      ...||+|++|.||+|+..+|+.||||+++......                          ...++.|.+.+.++.|+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   81 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV   81 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            46899999999999997789999999987642110                          1224679999999999987


Q ss_pred             ceeeeeeeecceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHh-cCCCcEEeccCCCCcEEECC
Q 003786          534 VRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ-YSRLRVIHRDLKASNILLDK  612 (795)
Q Consensus       534 v~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~iiHrDikp~NIll~~  612 (795)
                      .....+...  ..++||||++++++.....   ....++...+..++.|++.++.++|+ .+   |+||||||+||+++ 
T Consensus        82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l---~~~~~~~~~~~~i~~~l~~~l~~lH~~~g---ivHrDlkP~NIll~-  152 (190)
T cd05145          82 PVPEPILLK--KNVLVMEFIGDDGSPAPRL---KDVPLEEEEAEELYEQVVEQMRRLYQEAG---LVHGDLSEYNILYH-  152 (190)
T ss_pred             CCceEEEec--CCEEEEEEecCCCchhhhh---hhccCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCChhhEEEE-
Confidence            554443322  3489999999986543321   12346778899999999999999999 87   99999999999999 


Q ss_pred             CCCeeeeccccccccCC
Q 003786          613 DMNPKISDFGMARIFGG  629 (795)
Q Consensus       613 ~~~vkL~DFGla~~~~~  629 (795)
                      ++.++|+|||++.....
T Consensus       153 ~~~~~liDFG~a~~~~~  169 (190)
T cd05145         153 DGKPYIIDVSQAVELDH  169 (190)
T ss_pred             CCCEEEEEcccceecCC
Confidence            89999999999986543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.79  E-value=3e-19  Score=184.79  Aligned_cols=233  Identities=18%  Similarity=0.225  Sum_probs=148.2

Q ss_pred             CCccccccCcCCcccEEEeEecC-cceEEEEEecccC---ccchHHHHHHHHHHHhcCC----------cccceeeeee-
Q 003786          476 NFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQH----------RNLVRLLGCC-  540 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h----------~niv~l~~~~-  540 (795)
                      .+..++.||.|+++.||.+++.. ++++|||+.....   ....+++++|......+.+          -.++..++.. 
T Consensus        13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~   92 (288)
T PF14531_consen   13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR   92 (288)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred             EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence            45667899999999999999764 8999999875432   2334667777766655432          1222222221 


Q ss_pred             --------eecc--------eeeEEeecCCCCChhhhhh---ccCC-cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEe
Q 003786          541 --------IELE--------EKILIYEYMPNKSLDFFLF---DSTK-ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIH  600 (795)
Q Consensus       541 --------~~~~--------~~~lv~E~~~~gsL~~~l~---~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH  600 (795)
                              ....        ..+++|+-+ .++|..++.   .... ...+....+..+..|+++.+++||.+|   ++|
T Consensus        93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G---lVH  168 (288)
T PF14531_consen   93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG---LVH  168 (288)
T ss_dssp             ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EEE
T ss_pred             EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc---eEe
Confidence                    1111        235677766 557766653   1111 122334455667789999999999999   999


Q ss_pred             ccCCCCcEEECCCCCeeeeccccccccCCCccccccccccccccccccccccc--------CCCCcccchhhHHHHHHHH
Q 003786          601 RDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQ--------GLFSIKSDVFSFGVLLLET  672 (795)
Q Consensus       601 rDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~--------~~~~~k~DvwSlGvil~el  672 (795)
                      +||+|+|++++.+|.++|+||+.....+....     ....+..|.+||....        ..++.+.|.|+||+++|.|
T Consensus       169 gdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~-----~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~l  243 (288)
T PF14531_consen  169 GDIKPENFLLDQDGGVFLGDFSSLVRAGTRYR-----CSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSL  243 (288)
T ss_dssp             ST-SGGGEEE-TTS-EEE--GGGEEETTEEEE-----GGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHH
T ss_pred             cccceeeEEEcCCCCEEEcChHHHeecCceee-----ccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHH
Confidence            99999999999999999999988875442211     1234577999997643        2578999999999999999


Q ss_pred             HhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCC
Q 003786          673 LSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADR  737 (795)
Q Consensus       673 ltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~R  737 (795)
                      ++++.|++..........                   .-..+. ..++.+..||..+|+.||++|
T Consensus       244 WC~~lPf~~~~~~~~~~~-------------------~f~~C~-~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  244 WCGRLPFGLSSPEADPEW-------------------DFSRCR-DMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             HHSS-STCCCGGGSTSGG-------------------GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred             HHccCCCCCCCccccccc-------------------cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence            999999986432211100                   112344 677888999999999999988

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.78  E-value=1.2e-18  Score=171.28  Aligned_cols=184  Identities=18%  Similarity=0.147  Sum_probs=137.5

Q ss_pred             ccccccCcCCcccEEEeEecCcceEEEEEecccCcc----chHHHHHHHHHHHhcC-CcccceeeeeeeecceeeEEeec
Q 003786          478 STENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQ----GQEEFKNEIKLIAKLQ-HRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       478 ~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      .+...|++|+||+||.+.. .+++++.+.+.....-    ....+.+|+++|++|+ |+++++++++    +..+++|||
T Consensus         5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey   79 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY   79 (218)
T ss_pred             ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence            3567899999999998765 6778887777543221    1225889999999995 5889999886    456999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccC-CCCcEEECCCCCeeeeccccccccCCCc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDL-KASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDi-kp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      +.|.+|...+.         . ....++.|++++|.++|.+|   |+|||| ||+|||++.++.++|+|||++.......
T Consensus        80 I~G~~L~~~~~---------~-~~~~~~~qi~~~L~~lH~~G---IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~  146 (218)
T PRK12274         80 LAGAAMYQRPP---------R-GDLAYFRAARRLLQQLHRCG---VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRA  146 (218)
T ss_pred             ecCccHHhhhh---------h-hhHHHHHHHHHHHHHHHHCc---CccCCCCCcceEEEcCCCCEEEEECCCceecCCcc
Confidence            99999864431         1 12357789999999999998   999999 7999999999999999999998654332


Q ss_pred             cc----cc-------ccccccccccccccccccC-CCC-cccchhhHHHHHHHHHhCCCCC
Q 003786          632 LQ----SK-------TKRIVGTYGYMSPEYAQQG-LFS-IKSDVFSFGVLLLETLSSKRNT  679 (795)
Q Consensus       632 ~~----~~-------~~~~~gt~~y~APE~~~~~-~~~-~k~DvwSlGvil~elltG~~p~  679 (795)
                      ..    ..       ......++.|++|+...-- ..+ ...++++.|..+|.++|++.+.
T Consensus       147 ~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~  207 (218)
T PRK12274        147 RWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLH  207 (218)
T ss_pred             hHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCc
Confidence            10    00       0112357788888754321 233 5679999999999999998765

>PRK10345 hypothetical protein; Provisional

Probab=99.75  E-value=7e-18  Score=169.22  Aligned_cols=136  Identities=21%  Similarity=0.294  Sum_probs=106.3

Q ss_pred             ccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhc-----CCcccceeeeeeeecc---eee-E
Q 003786          478 STENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKL-----QHRNLVRLLGCCIELE---EKI-L  548 (795)
Q Consensus       478 ~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~l~~~~~~~~---~~~-l  548 (795)
                      .-.+.||+|+||.||.  ++.....+||++........+.+.+|+.+++.+     .||||+++++++.++.   ..+ +
T Consensus         5 ~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~   82 (210)
T PRK10345          5 SEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDV   82 (210)
T ss_pred             CCcceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEE
Confidence            3457899999999996  544344479998765555667899999999999     5799999999998874   333 7


Q ss_pred             Eeec--CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHH-HHHHhcCCCcEEeccCCCCcEEECC----CCCeeeecc
Q 003786          549 IYEY--MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGL-LYLHQYSRLRVIHRDLKASNILLDK----DMNPKISDF  621 (795)
Q Consensus       549 v~E~--~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l-~~LH~~~~~~iiHrDikp~NIll~~----~~~vkL~DF  621 (795)
                      |+||  +++++|.+++...    .+++.  ..++.+++.++ +|||+++   |+||||||+|||++.    ++.++|+||
T Consensus        83 I~e~~G~~~~tL~~~l~~~----~~~e~--~~~~~~~L~~l~~yLh~~~---IvhrDlKp~NILl~~~~~~~~~~~LiDg  153 (210)
T PRK10345         83 IADFDGKPSITLTEFAEQC----RYEED--VAQLRQLLKKLKRYLLDNR---IVTMELKPQNILCQRISESEVIPVVCDN  153 (210)
T ss_pred             EecCCCCcchhHHHHHHcc----cccHh--HHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence            8999  6689999999432    24444  35677888777 8999998   999999999999974    347999995


Q ss_pred             ccc
Q 003786          622 GMA  624 (795)
Q Consensus       622 Gla  624 (795)
                      +-+
T Consensus       154 ~G~  156 (210)
T PRK10345        154 IGE  156 (210)
T ss_pred             CCC
Confidence            444

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.75  E-value=7.4e-18  Score=197.28  Aligned_cols=197  Identities=20%  Similarity=0.250  Sum_probs=162.0

Q ss_pred             HHHccCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcC---Ccccceeeeeeeecceee
Q 003786          471 SAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQ---HRNLVRLLGCCIELEEKI  547 (795)
Q Consensus       471 ~~~~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~  547 (795)
                      ....+.|.+.+.||+|+||+||+|...+|+.||+|+-+...   .-+|.--.+++.+|+   -+-|+.+...+.-.+..+
T Consensus       694 ~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~---~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~  770 (974)
T KOG1166|consen  694 EVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPN---PWEFYICLQVMERLKPQMLPSIMHISSAHVFQNASV  770 (974)
T ss_pred             eecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCC---ceeeeehHHHHHhhchhhhcchHHHHHHHccCCcce
Confidence            44567899999999999999999998889999999876542   222322334444444   355677777777888899


Q ss_pred             EEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECC-------CCCeeeec
Q 003786          548 LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDK-------DMNPKISD  620 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~-------~~~vkL~D  620 (795)
                      ||+||.+.|+|.+++.   ..+.+++.....++.|+++.+..||..+   |||+||||+|+||..       .-.++|+|
T Consensus       771 lv~ey~~~Gtlld~~N---~~~~m~e~lv~~~~~qml~ive~lH~~~---IIHgDiKPDNfll~~~~~~~~~~~~l~lID  844 (974)
T KOG1166|consen  771 LVSEYSPYGTLLDLIN---TNKVMDEYLVMFFSCQMLRIVEHLHAMG---IIHGDIKPDNFLLRREICADSDSKGLYLID  844 (974)
T ss_pred             eeeeccccccHHHhhc---cCCCCCchhhhHHHHHHHHHHHHHHhcc---eecccCCcceeEeecccCCCCcccceEEEe
Confidence            9999999999999984   6677999999999999999999999998   999999999999942       34589999


Q ss_pred             cccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCC
Q 003786          621 FGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSK  676 (795)
Q Consensus       621 FGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~  676 (795)
                      ||.+..+..-......+..++|-.+-.+|...+.+.++.+|.|.|+.+++-||.|+
T Consensus       845 fG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~  900 (974)
T KOG1166|consen  845 FGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGK  900 (974)
T ss_pred             cccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHH
Confidence            99998654332233455678899999999999999999999999999999999996

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.74  E-value=7.5e-18  Score=185.09  Aligned_cols=214  Identities=24%  Similarity=0.354  Sum_probs=160.5

Q ss_pred             HHhcCCcccceeeeeeeecceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCC
Q 003786          525 IAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLK  604 (795)
Q Consensus       525 l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDik  604 (795)
                      |+.+.|.|+.+++|.+.++...+.|.+||..|+|.+.+..  ..-.+++.-...++++|++||.|||...  -..|+.++
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~--~~~~~d~~F~~s~~rdi~~Gl~ylh~s~--i~~hg~l~   76 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN--EDIKLDYFFILSFIRDISKGLAYLHNSP--IGYHGALK   76 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc--cccCccHHHHHHHHHHHHHHHHHHhcCc--ceeeeeec
Confidence            4578999999999999999999999999999999999965  2344788888999999999999999865  22999999


Q ss_pred             CCcEEECCCCCeeeeccccccccCCCcccccccccccccccccccccccC-------CCCcccchhhHHHHHHHHHhCCC
Q 003786          605 ASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG-------LFSIKSDVFSFGVLLLETLSSKR  677 (795)
Q Consensus       605 p~NIll~~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-------~~~~k~DvwSlGvil~elltG~~  677 (795)
                      +.|.++|....+||+|||+.................-..-|.|||.++..       ..+.+.||||||++++||++...
T Consensus        77 s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~  156 (484)
T KOG1023|consen   77 SSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSG  156 (484)
T ss_pred             cccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccC
Confidence            99999999999999999998876431111111122345679999998763       24678999999999999999999


Q ss_pred             CCCCCCCcch--hHhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          678 NTDFSNTNSL--TLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       678 p~~~~~~~~~--~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      ||+.......  .++.....     .....+.|.+....  +....+..++..||..+|++||++++|-..++.
T Consensus       157 ~~~~~~~~~~~~eii~~~~~-----~~~~~~rP~i~~~~--e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~  223 (484)
T KOG1023|consen  157 PFDLRNLVEDPDEIILRVKK-----GGSNPFRPSIELLN--ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLT  223 (484)
T ss_pred             ccccccccCChHHHHHHHHh-----cCCCCcCcchhhhh--hcchHHHHHHHHhcccChhhCccHHHHHhhhhh
Confidence            9986442221  22221111     11112223222111  333468899999999999999999999887765

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.72  E-value=1.9e-17  Score=170.68  Aligned_cols=197  Identities=21%  Similarity=0.253  Sum_probs=134.9

Q ss_pred             CCcccceeeeeeeec---------------------------ceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHH
Q 003786          529 QHRNLVRLLGCCIEL---------------------------EEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIE  581 (795)
Q Consensus       529 ~h~niv~l~~~~~~~---------------------------~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~  581 (795)
                      +|||||+++++|.+.                           ..+|+||...+. +|..++....    .+.....-++.
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~----~s~r~~~~~la  348 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH----RSYRTGRVILA  348 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC----CchHHHHHHHH
Confidence            499999999887542                           245788876644 6777774322    44566778899


Q ss_pred             HHHHHHHHHHhcCCCcEEeccCCCCcEEEC--CCC--CeeeeccccccccCCC----ccccccccccccccccccccccc
Q 003786          582 GIAQGLLYLHQYSRLRVIHRDLKASNILLD--KDM--NPKISDFGMARIFGGD----ELQSKTKRIVGTYGYMSPEYAQQ  653 (795)
Q Consensus       582 ~i~~~l~~LH~~~~~~iiHrDikp~NIll~--~~~--~vkL~DFGla~~~~~~----~~~~~~~~~~gt~~y~APE~~~~  653 (795)
                      |+++|+.|||.++   |.|||+|.+||||.  +|+  .+.|+|||.+-.....    .+.+..-...|.-.-||||+...
T Consensus       349 QlLEav~hL~~hg---vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta  425 (598)
T KOG4158|consen  349 QLLEAVTHLHKHG---VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATA  425 (598)
T ss_pred             HHHHHHHHHHHcc---chhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhc
Confidence            9999999999998   99999999999993  333  5789999998643221    11122223457788999998864


Q ss_pred             CC------CCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHH
Q 003786          654 GL------FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGL  727 (795)
Q Consensus       654 ~~------~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~  727 (795)
                      .+      --.|+|.|+.|.+.||++....||-...+.....-.     +.+...         ...+..++..+.+++.
T Consensus       426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~-----Yqe~qL---------Palp~~vpp~~rqlV~  491 (598)
T KOG4158|consen  426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRT-----YQESQL---------PALPSRVPPVARQLVF  491 (598)
T ss_pred             CCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhh-----hhhhhC---------CCCcccCChHHHHHHH
Confidence            32      135899999999999999999998543322211110     111111         1123334456678899


Q ss_pred             hhccCCCCCCCCHHHHHHHH
Q 003786          728 LCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       728 ~cL~~dP~~RPt~~evl~~L  747 (795)
                      ..|+.||++||+..-....|
T Consensus       492 ~lL~r~pskRvsp~iAANvl  511 (598)
T KOG4158|consen  492 DLLKRDPSKRVSPNIAANVL  511 (598)
T ss_pred             HHhcCCccccCCccHHHhHH
Confidence            99999999999876544443

>smart00090 RIO RIO-like kinase

Probab=99.71  E-value=4.2e-17  Score=167.70  Aligned_cols=147  Identities=16%  Similarity=0.160  Sum_probs=112.8

Q ss_pred             HHccCCccccccCcCCcccEEEeE--ecCcceEEEEEecccCcc------------------------chHHHHHHHHHH
Q 003786          472 AATANFSTENKLGEGGFGPVYKGR--LLNGQEVAVKRLSSQSGQ------------------------GQEEFKNEIKLI  525 (795)
Q Consensus       472 ~~~~~~~~~~~LG~G~~g~Vy~~~--~~~~~~vavK~~~~~~~~------------------------~~~~~~~E~~~l  525 (795)
                      .....|++.+.||+|++|.||+|.  ..+|+.||||++......                        ....+..|+.++
T Consensus        25 ~~~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L  104 (237)
T smart00090       25 NRGILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNL  104 (237)
T ss_pred             hcCchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHH
Confidence            334468899999999999999998  567999999998653210                        012356899999


Q ss_pred             HhcCCcc--cceeeeeeeecceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccC
Q 003786          526 AKLQHRN--LVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDL  603 (795)
Q Consensus       526 ~~l~h~n--iv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDi  603 (795)
                      .++.+..  +.+++++    ...++||||+++.+|......   ...+....+..++.||+.++.+||+.+  +|+||||
T Consensus       105 ~~L~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~g--~iiH~Di  175 (237)
T smart00090      105 QRLYEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLK---DVEPEEEEEFELYDDILEEMRKLYKEG--ELVHGDL  175 (237)
T ss_pred             HHHHhcCCCCCeeeEe----cCceEEEEEecCCcccccccc---cCCcchHHHHHHHHHHHHHHHHHHhcC--CEEeCCC
Confidence            9997633  3344432    245899999999888655422   223455667899999999999999876  4999999


Q ss_pred             CCCcEEECCCCCeeeeccccccccC
Q 003786          604 KASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       604 kp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      ||+||+++ ++.++|+|||.+....
T Consensus       176 kp~NIli~-~~~i~LiDFg~a~~~~  199 (237)
T smart00090      176 SEYNILVH-DGKVVIIDVSQSVELD  199 (237)
T ss_pred             ChhhEEEE-CCCEEEEEChhhhccC
Confidence            99999999 8899999999987543

>PF08276 PAN_2: PAN-like domain; InterPro: IPR013227 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions []

Probab=99.70  E-value=1.4e-17  Score=134.13  Aligned_cols=66  Identities=52%  Similarity=1.166  Sum_probs=59.3

Q ss_pred             CCCCCceeEeccCCCCcccccccccccCHHHHHHHHHhcCCeeeeeeccccCCCceeEEeccccccc
Q 003786          335 CKSGDRFIMLDDVKLPDFVEASLNESMNVKECEAECLKNCTCRAYANSKVTGEGSGCLMWFGDLIDI  401 (795)
Q Consensus       335 C~~~d~f~~l~~~~~pd~~~~~~~~~~s~~~C~~~Cl~nCsC~ay~~~~~~~~~~~c~~w~gdl~~~  401 (795)
                      |+++|+|++|++|++|++....++.+.++++|+..|++||||+||+|.++. ++++|++|+|+|+|+
T Consensus         1 C~~~d~F~~l~~~~~p~~~~~~~~~~~s~~~C~~~Cl~nCsC~Ayay~~~~-~~~~C~lW~~~L~d~   66 (66)
T PF08276_consen    1 CGSGDGFLKLPNMKLPDFDNAIVDSSVSLEECEKACLSNCSCTAYAYSNLS-GGGGCLLWYGDLVDL   66 (66)
T ss_pred             CcCCCEEEEECCeeCCCCcceeeecCCCHHHHHhhcCCCCCEeeEEeeccC-CCCEEEEEcCEeecC
Confidence            566799999999999999877776779999999999999999999998665 678999999999985

These domains contain a hair-pin loop like structure, similar to knottins, but the pattern of disulphide bonds differs

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.70  E-value=1.7e-17  Score=189.95  Aligned_cols=210  Identities=20%  Similarity=0.291  Sum_probs=143.9

Q ss_pred             HccCCccccccCcCCcccEEEeEecC-cceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      ...+|..++.|..|+||.||.++++. .+.+|+ ++.++...    +++   ++.....|.+|                 
T Consensus        81 ~e~df~~IklisngAygavylvrh~~trqrfa~-kiNkq~li----lRn---ilt~a~npfvv-----------------  135 (1205)
T KOG0606|consen   81 SESDFNTIKLISNGAYGAVYLVRHKETRQRFAM-KINKQNLI----LRN---ILTFAGNPFVV-----------------  135 (1205)
T ss_pred             CccccceeEeeccCCCCceeeeeccccccchhh-cccccchh----hhc---cccccCCccee-----------------
Confidence            34789999999999999999998764 788998 44333211    111   33333455444                 


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC--
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG--  629 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~--  629 (795)
                          |+-...+   ...+.++..        ++.+++|||+.+   |+|||+||+|.+|+.-|++|++|||+.+...-  
T Consensus       136 ----gDc~tll---k~~g~lPvd--------mvla~Eylh~yg---ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~  197 (1205)
T KOG0606|consen  136 ----GDCATLL---KNIGPLPVD--------MVLAVEYLHSYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSL  197 (1205)
T ss_pred             ----chhhhhc---ccCCCCcch--------hhHHhHhhccCC---eecCCCCCCcceeeecccccccchhhhhhhhhhc
Confidence                2222222   111223322        278899999998   99999999999999999999999999875311  


Q ss_pred             ------Ccc-----cccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchh-HhHhHhhhc
Q 003786          630 ------DEL-----QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLT-LLGHAWDLW  697 (795)
Q Consensus       630 ------~~~-----~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~-~~~~~~~~~  697 (795)
                            ...     +-..+..+||+.|.|||++....|...+|+|++|+|+||.+.|..||.+...+.+. .+......|
T Consensus       198 atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~w  277 (1205)
T KOG0606|consen  198 ATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEW  277 (1205)
T ss_pred             cchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccc
Confidence                  000     11123468999999999999999999999999999999999999999775433321 111111111


Q ss_pred             cCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCC
Q 003786          698 KDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPT  739 (795)
Q Consensus       698 ~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt  739 (795)
                      .++              ......+..++|.++|+.+|..|--
T Consensus       278 pE~--------------dea~p~Ea~dli~~LL~qnp~~Rlg  305 (1205)
T KOG0606|consen  278 PEE--------------DEALPPEAQDLIEQLLRQNPLCRLG  305 (1205)
T ss_pred             ccc--------------CcCCCHHHHHHHHHHHHhChHhhcc
Confidence            111              1122346677888999999999963

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.69  E-value=1.6e-16  Score=159.75  Aligned_cols=145  Identities=19%  Similarity=0.201  Sum_probs=113.9

Q ss_pred             HhHHHHccCCccccccCcCCcccEEEeEecCcceEEEEEecccCcc----------------------chHHHHHHHHHH
Q 003786          468 ASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQ----------------------GQEEFKNEIKLI  525 (795)
Q Consensus       468 ~~i~~~~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~E~~~l  525 (795)
                      .++......|.+.++||+|+||.||++...+|+.||||++......                      .......|..++
T Consensus         8 ~~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l   87 (198)
T cd05144           8 HTLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAAL   87 (198)
T ss_pred             HHHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHH
Confidence            3444555568888999999999999998888999999987543210                      112356789999


Q ss_pred             HhcCCcc--cceeeeeeeecceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccC
Q 003786          526 AKLQHRN--LVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDL  603 (795)
Q Consensus       526 ~~l~h~n--iv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDi  603 (795)
                      .++.|++  +.+.++    ....++||||+++++|.....         ......++.++++++.++|+.+   |+||||
T Consensus        88 ~~l~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~---------~~~~~~~~~~i~~~l~~lh~~g---i~H~Dl  151 (198)
T cd05144          88 KALYEEGFPVPKPID----WNRHAVVMEYIDGVELYRVRV---------LEDPEEVLDEILEEIVKAYKHG---IIHGDL  151 (198)
T ss_pred             HHHHHcCCCCCceee----cCCceEEEEEeCCcchhhccc---------cccHHHHHHHHHHHHHHHHHCC---CCcCCC
Confidence            9998874  444443    245589999999999876541         1355678899999999999987   999999


Q ss_pred             CCCcEEECCCCCeeeeccccccccC
Q 003786          604 KASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       604 kp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      ||+||++++++.++|+|||++....
T Consensus       152 ~p~Nill~~~~~~~liDfg~~~~~~  176 (198)
T cd05144         152 SEFNILVDDDEKIYIIDWPQMVSTD  176 (198)
T ss_pred             CcccEEEcCCCcEEEEECCccccCC
Confidence            9999999999999999999997554

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.69  E-value=1.7e-16  Score=161.23  Aligned_cols=134  Identities=20%  Similarity=0.342  Sum_probs=113.5

Q ss_pred             cccCcCCcccEEEeEecCcceEEEEEecccCcc--------chHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          481 NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQ--------GQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      +.||+|++|.||+|.. .+..+++|+.......        ....+.+|++++..+.|++|.....++...+..++||||
T Consensus         2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~   80 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY   80 (211)
T ss_pred             cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence            5799999999999987 7788999986543211        124577899999999999988877777778888999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                      ++|++|.+++...      .. .+..++.+++.+|.++|+.+   ++|+|++|.|||++ ++.++|+|||++..
T Consensus        81 ~~G~~L~~~~~~~------~~-~~~~i~~~i~~~l~~lH~~~---i~H~Dl~p~Nil~~-~~~~~liDf~~a~~  143 (211)
T PRK14879         81 IEGEPLKDLINSN------GM-EELELSREIGRLVGKLHSAG---IIHGDLTTSNMILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             eCCcCHHHHHHhc------cH-HHHHHHHHHHHHHHHHHhCC---cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence            9999999887422      12 77899999999999999998   99999999999999 78999999999874

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.68  E-value=1.3e-17  Score=179.42  Aligned_cols=192  Identities=23%  Similarity=0.261  Sum_probs=135.4

Q ss_pred             CccccccCcCCcccEEEeEecCc---c-eEEEEEecccCccchHHHHHHHHHHHhc-CCcccceee------eeee----
Q 003786          477 FSTENKLGEGGFGPVYKGRLLNG---Q-EVAVKRLSSQSGQGQEEFKNEIKLIAKL-QHRNLVRLL------GCCI----  541 (795)
Q Consensus       477 ~~~~~~LG~G~~g~Vy~~~~~~~---~-~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~------~~~~----  541 (795)
                      ..+.+..+..+++.+...+...+   . .++-+..............+++-.+... +|+..+..-      ....    
T Consensus       246 ~~~~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~d~~~~~~~~~r~~~~l~~~~~~~~s~~~d~~~s~~~~~~~~~v  325 (516)
T KOG1033|consen  246 SSISKSSERVSSGIVFEKQGKNNSSLREWLKSKRADVDSLCACKYTFRQLGVLVDSSHSNRSILEDLRPSLFESSKRNKV  325 (516)
T ss_pred             ccccccccccccCCchhhhhcccchhhhhccchhhhccchhhhhhhhhhhhheeccccCCcccccCCCCchhhhcccccc
Confidence            44456667777777766653332   2 2333332222212222333344444333 344433321      0111    


Q ss_pred             -ecceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeec
Q 003786          542 -ELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISD  620 (795)
Q Consensus       542 -~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~D  620 (795)
                       .....++.|++|.-.+|.++|.........++.....++.|++.|+.|   ++   .+|||+||.||+...+..+||.|
T Consensus       326 ~~~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~---~ihrdlkp~nif~~~d~q~kIgD  399 (516)
T KOG1033|consen  326 GKKVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KG---LIHRDLKPSNIFFSDDDQLKIGD  399 (516)
T ss_pred             ccccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---cc---chhhhccccccccccchhhhhhh
Confidence             123467999999999999999766656667888999999999999999   55   99999999999999999999999


Q ss_pred             cccccccCCCc----ccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh
Q 003786          621 FGMARIFGGDE----LQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS  674 (795)
Q Consensus       621 FGla~~~~~~~----~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt  674 (795)
                      ||+........    .....+...||..||+||.+.+..|+.|+||||||+||+|++.
T Consensus       400 Fgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~  457 (516)
T KOG1033|consen  400 FGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI  457 (516)
T ss_pred             hhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence            99988664433    2234456789999999999999999999999999999999996

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.67  E-value=2.8e-16  Score=158.01  Aligned_cols=130  Identities=22%  Similarity=0.383  Sum_probs=106.9

Q ss_pred             ccCcCCcccEEEeEecCcceEEEEEecccCcc--------chHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecC
Q 003786          482 KLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQ--------GQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYM  553 (795)
Q Consensus       482 ~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  553 (795)
                      .||+|+||.||+|.. +++.+++|+.......        ..+++.+|++++..++|+++.....++...+..++||||+
T Consensus         1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~   79 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI   79 (199)
T ss_pred             CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence            489999999999985 6788999986543211        1256778999999999987666555666777789999999


Q ss_pred             CCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          554 PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       554 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                      +|++|.+.+....          ..++.+++++|.+||+.+   ++|+|++|+||+++ ++.++++|||++..
T Consensus        80 ~g~~l~~~~~~~~----------~~~~~~i~~~l~~lH~~g---i~H~Dl~~~Nil~~-~~~~~liDfg~a~~  138 (199)
T TIGR03724        80 EGKPLKDVIEEGN----------DELLREIGRLVGKLHKAG---IVHGDLTTSNIIVR-DDKLYLIDFGLGKY  138 (199)
T ss_pred             CCccHHHHHhhcH----------HHHHHHHHHHHHHHHHCC---eecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence            9999988763211          178999999999999998   99999999999999 89999999999875

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.65  E-value=5.3e-16  Score=179.45  Aligned_cols=138  Identities=20%  Similarity=0.343  Sum_probs=112.6

Q ss_pred             HccCCccccccCcCCcccEEEeEecCcceEEEEEe-cccCc-------cchHHHHHHHHHHHhcCCcccceeeeeeeecc
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRL-SSQSG-------QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELE  544 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~-~~~~~-------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  544 (795)
                      ....|...+.||+|+||.||+|..... .+++|+. .+...       ...+++.+|++++++++|++++..+.++....
T Consensus       331 ~~~~~~~~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~  409 (535)
T PRK09605        331 VKRRKIPDHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPE  409 (535)
T ss_pred             cccccCccceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCC
Confidence            345567789999999999999987443 4444433 22111       12356889999999999999998888877777


Q ss_pred             eeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccc
Q 003786          545 EKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMA  624 (795)
Q Consensus       545 ~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla  624 (795)
                      ..++||||+++++|.+++.           ....++.+++++|.+||+.+   |+||||||+|||+ .++.++|+|||++
T Consensus       410 ~~~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH~~g---iiHrDlkp~NILl-~~~~~~liDFGla  474 (535)
T PRK09605        410 EKTIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLHKAG---IVHGDLTTSNFIV-RDDRLYLIDFGLG  474 (535)
T ss_pred             CCEEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHHhCC---CccCCCChHHEEE-ECCcEEEEeCccc
Confidence            8899999999999988873           35678999999999999988   9999999999999 6789999999999


Q ss_pred             cc
Q 003786          625 RI  626 (795)
Q Consensus       625 ~~  626 (795)
                      +.
T Consensus       475 ~~  476 (535)
T PRK09605        475 KY  476 (535)
T ss_pred             cc
Confidence            75

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.60  E-value=1.8e-16  Score=182.59  Aligned_cols=257  Identities=22%  Similarity=0.285  Sum_probs=195.9

Q ss_pred             ccCCccccccCcCCcccEEEeEecC--cceEEEEEecccC--ccchHHHHHHHHHHHhcC-CcccceeeeeeeecceeeE
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLN--GQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQ-HRNLVRLLGCCIELEEKIL  548 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~--~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l  548 (795)
                      ...|.+.+.||+|.|+.|-......  ...+|+|.+....  ....+.+..|..+-..+. |+|++.+++...+.+..++
T Consensus        19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~   98 (601)
T KOG0590|consen   19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL   98 (601)
T ss_pred             cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence            3567888889999999998887543  3456777665443  223345556887777776 9999999999999999999


Q ss_pred             EeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHH-hcCCCcEEeccCCCCcEEECCCC-Ceeeeccccccc
Q 003786          549 IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH-QYSRLRVIHRDLKASNILLDKDM-NPKISDFGMARI  626 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH-~~~~~~iiHrDikp~NIll~~~~-~vkL~DFGla~~  626 (795)
                      ++||..++++...+. .......+...+..++.|+..++.|+| ..+   +.||||||+|.+++..+ .+|++|||+|..
T Consensus        99 ~~~~s~g~~~f~~i~-~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~---~~h~~ikP~n~~l~~s~~~l~~~df~~At~  174 (601)
T KOG0590|consen   99 SLSYSDGGSLFSKIS-HPDSTGTSSSSASRYLPQLNSGLSYLHPENG---VTHRDIKPSNSLLDESGSALKIADFGLATA  174 (601)
T ss_pred             ccCcccccccccccc-cCCccCCCCcchhhhhhhhccCccccCcccc---cccCCCCCccchhccCCCcccCCCchhhcc
Confidence            999999999987773 111224667788899999999999999 777   99999999999999999 999999999998


Q ss_pred             cCC-Cccccccccccc-ccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccc
Q 003786          627 FGG-DELQSKTKRIVG-TYGYMSPEYAQQG-LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAW  703 (795)
Q Consensus       627 ~~~-~~~~~~~~~~~g-t~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~  703 (795)
                      +.. ..........+| ++.|+|||...+. ......|+||.|+++..+++|..|++........+..+.     +... 
T Consensus       175 ~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~-----~~~~-  248 (601)
T KOG0590|consen  175 YRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWK-----SNKG-  248 (601)
T ss_pred             ccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeec-----cccc-
Confidence            766 454555556778 9999999998884 567889999999999999999999987664443322211     1110 


Q ss_pred             cccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 003786          704 ELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVS  745 (795)
Q Consensus       704 ~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  745 (795)
                           ...............+++.+++..+|+.|.+.+++..
T Consensus       249 -----~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~  285 (601)
T KOG0590|consen  249 -----RFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKL  285 (601)
T ss_pred             -----ccccCccccCChhhhhcccccccCCchhccccccccc
Confidence                 0001112223345667888899999999999998865

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.59  E-value=5.7e-15  Score=146.91  Aligned_cols=137  Identities=20%  Similarity=0.260  Sum_probs=98.8

Q ss_pred             ccccCcCCcccEEEeEecCcceEEEEEecccCcc--chHH----------------------HHHHHHHHHhcCCcc--c
Q 003786          480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQ--GQEE----------------------FKNEIKLIAKLQHRN--L  533 (795)
Q Consensus       480 ~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~----------------------~~~E~~~l~~l~h~n--i  533 (795)
                      .+.||+|+||.||+|...+++.||||++......  ....                      ...|...+.++.+..  +
T Consensus         2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~   81 (187)
T cd05119           2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV   81 (187)
T ss_pred             CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999878999999998653211  1111                      135666666665433  3


Q ss_pred             ceeeeeeeecceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHh-cCCCcEEeccCCCCcEEECC
Q 003786          534 VRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ-YSRLRVIHRDLKASNILLDK  612 (795)
Q Consensus       534 v~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~iiHrDikp~NIll~~  612 (795)
                      .+.+++    ...++||||++++.+.........   . ...+..++.+++.++.++|. .+   |+|+||||+||+++ 
T Consensus        82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~---~-~~~~~~~~~~~~~~l~~lh~~~~---ivH~Dl~p~Nili~-  149 (187)
T cd05119          82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR---L-LEDPEELYDQILELMRKLYREAG---LVHGDLSEYNILVD-  149 (187)
T ss_pred             CceEec----CCCEEEEEEeCCCCccChhhhhhh---h-cccHHHHHHHHHHHHHHHhhccC---cCcCCCChhhEEEE-
Confidence            444433    346899999999544221111100   1 15778899999999999999 76   99999999999999 


Q ss_pred             CCCeeeeccccccccC
Q 003786          613 DMNPKISDFGMARIFG  628 (795)
Q Consensus       613 ~~~vkL~DFGla~~~~  628 (795)
                      ++.++|+|||.+....
T Consensus       150 ~~~~~liDfg~a~~~~  165 (187)
T cd05119         150 DGKVYIIDVPQAVEID  165 (187)
T ss_pred             CCcEEEEECccccccc
Confidence            8999999999997543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.58  E-value=1.2e-14  Score=138.33  Aligned_cols=135  Identities=23%  Similarity=0.231  Sum_probs=114.7

Q ss_pred             cccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCC--cccceeeeeeeecceeeEEeecCCCC
Q 003786          479 TENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQH--RNLVRLLGCCIELEEKILIYEYMPNK  556 (795)
Q Consensus       479 ~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv~E~~~~g  556 (795)
                      +.+.||+|.++.||+++..+ +.+++|.......  ...+.+|+.+++.++|  +++.+++.+....+..+++|||++++
T Consensus         2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~   78 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE   78 (155)
T ss_pred             cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence            45789999999999998744 7899999865433  5678999999999987  58999999888888899999999988


Q ss_pred             ChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          557 SLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       557 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                      .+..+          +......++.++++++++||.....+++|+||+|+||+++..+.++++|||.+..
T Consensus        79 ~~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~  138 (155)
T cd05120          79 TLDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY  138 (155)
T ss_pred             ecccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence            77543          3456677899999999999987555699999999999999989999999999874

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.54  E-value=3.9e-14  Score=145.97  Aligned_cols=135  Identities=23%  Similarity=0.275  Sum_probs=104.3

Q ss_pred             cccC-cCCcccEEEeEecCcceEEEEEecccC-------------ccchHHHHHHHHHHHhcCCccc--ceeeeeeeecc
Q 003786          481 NKLG-EGGFGPVYKGRLLNGQEVAVKRLSSQS-------------GQGQEEFKNEIKLIAKLQHRNL--VRLLGCCIELE  544 (795)
Q Consensus       481 ~~LG-~G~~g~Vy~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~E~~~l~~l~h~ni--v~l~~~~~~~~  544 (795)
                      ..|| .||.|+||.++. .+..++||++....             ......+.+|++++.+|+|++|  ++.+++.....
T Consensus        37 ~~lg~~~g~gtv~~v~~-~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~  115 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQT-PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH  115 (239)
T ss_pred             ceeecCCCCccEEEEEe-CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence            4687 899999999877 47789999885321             1223567889999999998875  66777654332


Q ss_pred             e----eeEEeecCCC-CChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeee
Q 003786          545 E----KILIYEYMPN-KSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKIS  619 (795)
Q Consensus       545 ~----~~lv~E~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~  619 (795)
                      .    .++|||++++ .+|.+++..    ..+++    ..+.+|+++|.+||+.|   |+||||||+|||++.++.++|+
T Consensus       116 ~~~~~~~lV~e~l~G~~~L~~~l~~----~~l~~----~~~~~i~~~l~~lH~~G---I~HrDlkp~NILv~~~~~v~LI  184 (239)
T PRK01723        116 GLFYRADILIERIEGARDLVALLQE----APLSE----EQWQAIGQLIARFHDAG---VYHADLNAHNILLDPDGKFWLI  184 (239)
T ss_pred             CcceeeeEEEEecCCCCCHHHHHhc----CCCCH----HHHHHHHHHHHHHHHCC---CCCCCCCchhEEEcCCCCEEEE
Confidence            2    2599999997 688887732    12333    23678999999999998   9999999999999999999999


Q ss_pred             cccccccc
Q 003786          620 DFGMARIF  627 (795)
Q Consensus       620 DFGla~~~  627 (795)
                      |||.+...
T Consensus       185 Dfg~~~~~  192 (239)
T PRK01723        185 DFDRGELR  192 (239)
T ss_pred             ECCCcccC
Confidence            99998753

>cd00129 PAN_APPLE PAN/APPLE-like domain; present in N-terminal (N) domains of plasminogen/ hepatocyte growth factor proteins, plasma prekallikrein/coagulation factor XI and microneme antigen proteins, plant receptor-like protein kinases, and various nematode and leech anti-platelet proteins

Probab=99.46  E-value=6.9e-14  Score=116.16  Aligned_cols=71  Identities=24%  Similarity=0.458  Sum_probs=60.5

Q ss_pred             CCCCCceeEeccCCCCcccccccccccCHHHHHHHHHh---cCCeeeeeeccccCCCceeEEecccc-cccccccCCCCC
Q 003786          335 CKSGDRFIMLDDVKLPDFVEASLNESMNVKECEAECLK---NCTCRAYANSKVTGEGSGCLMWFGDL-IDIRKADDRNNG  410 (795)
Q Consensus       335 C~~~d~f~~l~~~~~pd~~~~~~~~~~s~~~C~~~Cl~---nCsC~ay~~~~~~~~~~~c~~w~gdl-~~~~~~~~~~~~  410 (795)
                      |..+..|+++.+|++|++..      +++++|++.|++   ||||+||+|.+.   +.||++|+++| ++++.  ....+
T Consensus         5 ~~~~g~fl~~~~~klpd~~~------~s~~eC~~~Cl~~~~nCsC~Aya~~~~---~~gC~~W~~~l~~d~~~--~~~~g   73 (80)
T cd00129           5 CKSAGTTLIKIALKIKTTKA------NTADECANRCEKNGLPFSCKAFVFAKA---RKQCLWFPFNSMSGVRK--EFSHG   73 (80)
T ss_pred             eecCCeEEEeecccCCcccc------cCHHHHHHHHhcCCCCCCceeeeccCC---CCCeEEecCcchhhHHh--ccCCC
Confidence            55667899999999999753      689999999999   999999999753   35899999999 99876  44568


Q ss_pred             ccEEEe
Q 003786          411 QSIYIR  416 (795)
Q Consensus       411 ~~lylR  416 (795)
                      .++|+|
T Consensus        74 ~~Ly~r   79 (80)
T cd00129          74 FDLYEN   79 (80)
T ss_pred             ceeEeE
Confidence            999998

Common structural features include two disulfide bonds that link the alpha-helix to the central region of the protein. PAN domains have significant functional versatility, fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.38  E-value=1.5e-12  Score=145.73  Aligned_cols=144  Identities=24%  Similarity=0.285  Sum_probs=100.8

Q ss_pred             CCccccccCcCCcccEEEeEecCcceEEEEEecccCccch----------------------------------------
Q 003786          476 NFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQ----------------------------------------  515 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~----------------------------------------  515 (795)
                      .|+ .+.||.|++|.||+|++.+|+.||||+.+.......                                        
T Consensus       119 ~fd-~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  197 (437)
T TIGR01982       119 EFE-EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRE  197 (437)
T ss_pred             hCC-CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHH
Confidence            344 368999999999999999999999999865321100                                        


Q ss_pred             HHHHHHHHHHHhcC----Ccccceeeeeee-ecceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHH-HHHH
Q 003786          516 EEFKNEIKLIAKLQ----HRNLVRLLGCCI-ELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQ-GLLY  589 (795)
Q Consensus       516 ~~~~~E~~~l~~l~----h~niv~l~~~~~-~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~-~l~~  589 (795)
                      -.+.+|.+.+.++.    |.+-+.+...+. ..+..++||||++|++|.++......  ..   ....++..++. .+..
T Consensus       198 ldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~--~~---~~~~ia~~~~~~~l~q  272 (437)
T TIGR01982       198 LDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA--GL---DRKALAENLARSFLNQ  272 (437)
T ss_pred             HCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc--CC---CHHHHHHHHHHHHHHH
Confidence            02344555555552    322333333332 34567999999999999877632111  11   34456666665 4678


Q ss_pred             HHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccC
Q 003786          590 LHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       590 LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      +|..|   ++|+|+||.||+++.++.++|+|||++..+.
T Consensus       273 l~~~g---~~H~D~hPgNilv~~~g~i~liDfG~~~~l~  308 (437)
T TIGR01982       273 VLRDG---FFHADLHPGNIFVLKDGKIIALDFGIVGRLS  308 (437)
T ss_pred             HHhCC---ceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence            89887   9999999999999999999999999998664

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.38  E-value=2.8e-13  Score=137.28  Aligned_cols=211  Identities=19%  Similarity=0.197  Sum_probs=144.3

Q ss_pred             HHHHHHHHHhcCCcccceeeeeeeec-----ceeeEEeecCCCCChhhhhhccCC-cccCChhhHHHHHHHHHHHHHHHH
Q 003786          518 FKNEIKLIAKLQHRNLVRLLGCCIEL-----EEKILIYEYMPNKSLDFFLFDSTK-ENLLGWGTRVRIIEGIAQGLLYLH  591 (795)
Q Consensus       518 ~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~~lv~E~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH  591 (795)
                      ...-..-|-.+.|.|||+++.|+.+.     ....+++|||..|++..+|....+ ...+....-.+++.||+.||.|||
T Consensus       114 ~~~vFdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLh  193 (458)
T KOG1266|consen  114 RRAVFDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLH  193 (458)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhh
Confidence            33334556677899999999987654     346899999999999999965443 345777778899999999999999


Q ss_pred             hcCCCcEEeccCCCCcEEECCCCCeeeeccccccccC--CCcccccccccccccccccccccccCCCCcccchhhHHHHH
Q 003786          592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG--GDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLL  669 (795)
Q Consensus       592 ~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~--~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil  669 (795)
                      +.. .+|+|+++..+-|++..+|-+||.--.-...-.  ............+.++|.|||.=....-+.++|||+||+..
T Consensus       194 s~~-PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcA  272 (458)
T KOG1266|consen  194 SCD-PPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCA  272 (458)
T ss_pred             ccC-CccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHH
Confidence            974 789999999999999999999884321111100  00111223334578899999987777778899999999999


Q ss_pred             HHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          670 LETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       670 ~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                      .||..+..-..........-.       ........+..           ..-..++.+|++..|..||+|++++.|.
T Consensus       273 lemailEiq~tnseS~~~~ee-------~ia~~i~~len-----------~lqr~~i~kcl~~eP~~rp~ar~llfHp  332 (458)
T KOG1266|consen  273 LEMAILEIQSTNSESKVEVEE-------NIANVIIGLEN-----------GLQRGSITKCLEGEPNGRPDARLLLFHP  332 (458)
T ss_pred             HHHHHheeccCCCcceeehhh-------hhhhheeeccC-----------ccccCcCcccccCCCCCCcchhhhhcCc
Confidence            999887643221111000000       00000001111           1122466789999999999999998863

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.30  E-value=9.5e-12  Score=121.49  Aligned_cols=131  Identities=22%  Similarity=0.136  Sum_probs=99.1

Q ss_pred             ccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccce-eeeeeeecceeeEEeecCCCCCh
Q 003786          480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR-LLGCCIELEEKILIYEYMPNKSL  558 (795)
Q Consensus       480 ~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~-l~~~~~~~~~~~lv~E~~~~gsL  558 (795)
                      ++.|+.|.++.||+++.. ++.+++|+...... ....+.+|+.+++.+.+.++++ ++.+.  ....++||||+++.++
T Consensus         3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l   78 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSEL   78 (170)
T ss_pred             eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCcc
Confidence            367999999999999864 78899998865432 2345788999999997666554 44432  3346899999999887


Q ss_pred             hhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcC--CCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          559 DFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS--RLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       559 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                      ....           .....++.+++++|+.||..+  ...++|+|++|.||+++ ++.++++|||.+..
T Consensus        79 ~~~~-----------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~  136 (170)
T cd05151          79 LTED-----------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM  136 (170)
T ss_pred             cccc-----------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence            5320           112345678999999999886  23369999999999999 67899999999864

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>cd01098 PAN_AP_plant Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins

Probab=99.30  E-value=4.9e-12  Score=108.05  Aligned_cols=80  Identities=39%  Similarity=0.868  Sum_probs=63.9

Q ss_pred             CCCCCCC---CceeEeccCCCCcccccccccccCHHHHHHHHHhcCCeeeeeeccccCCCceeEEecccccccccccCCC
Q 003786          332 SSDCKSG---DRFIMLDDVKLPDFVEASLNESMNVKECEAECLKNCTCRAYANSKVTGEGSGCLMWFGDLIDIRKADDRN  408 (795)
Q Consensus       332 ~~~C~~~---d~f~~l~~~~~pd~~~~~~~~~~s~~~C~~~Cl~nCsC~ay~~~~~~~~~~~c~~w~gdl~~~~~~~~~~  408 (795)
                      +++|.+.   +.|+.+.++++|++....  .+.++++|++.|++||+|+||+|.+   ++++|.+|.+.+.+.+..  ..
T Consensus         2 ~~~C~~~~~~~~f~~~~~~~~~~~~~~~--~~~s~~~C~~~Cl~nCsC~a~~~~~---~~~~C~~~~~~~~~~~~~--~~   74 (84)
T cd01098           2 PLNCGGDGSTDGFLKLPDVKLPDNASAI--TAISLEECREACLSNCSCTAYAYNN---GSGGCLLWNGLLNNLRSL--SS   74 (84)
T ss_pred             CcccCCCCCCCEEEEeCCeeCCCchhhh--ccCCHHHHHHHHhcCCCcceeeecC---CCCeEEEEeceecceEee--cC
Confidence            3457554   689999999999875443  6789999999999999999999963   357899999999887652  23


Q ss_pred             CCccEEEecc
Q 003786          409 NGQSIYIRVP  418 (795)
Q Consensus       409 ~~~~lylRl~  418 (795)
                      .+.++|||++
T Consensus        75 ~~~~~yiKv~   84 (84)
T cd01098          75 GGGTLYLRLA   84 (84)
T ss_pred             CCcEEEEEeC
Confidence            3678999975

PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica, one of probably many molecular mechanisms, by which hermaphrodite flowering plants avoid self-fertilization.

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.29  E-value=3.3e-12  Score=140.83  Aligned_cols=250  Identities=24%  Similarity=0.264  Sum_probs=182.6

Q ss_pred             cCCccccccCc--CCcccEEEeEe---cCcceEEEEEeccc--CccchHHHHHHHHHHHhcC-Ccccceeeeeeeeccee
Q 003786          475 ANFSTENKLGE--GGFGPVYKGRL---LNGQEVAVKRLSSQ--SGQGQEEFKNEIKLIAKLQ-HRNLVRLLGCCIELEEK  546 (795)
Q Consensus       475 ~~~~~~~~LG~--G~~g~Vy~~~~---~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~  546 (795)
                      ..|.+.+.+|.  |.+|.||.+..   .++..+|+|+-+..  .......-.+|+...++++ |++.++.+..+...+..
T Consensus       114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~l  193 (524)
T KOG0601|consen  114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGIL  193 (524)
T ss_pred             hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcc
Confidence            45677788999  99999999986   35788999984332  2233344456777777774 99999999999999999


Q ss_pred             eEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHH----HHHHHHhcCCCcEEeccCCCCcEEECCC-CCeeeecc
Q 003786          547 ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQ----GLLYLHQYSRLRVIHRDLKASNILLDKD-MNPKISDF  621 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~----~l~~LH~~~~~~iiHrDikp~NIll~~~-~~vkL~DF  621 (795)
                      ++-+|++. .+|..+.  ......++...+.....+..+    ||.++|..+   |+|-|+||.||++..+ ...+++||
T Consensus       194 fiqtE~~~-~sl~~~~--~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~---~~~~~~kp~~i~~~~~~~s~~~~df  267 (524)
T KOG0601|consen  194 FIQTELCG-ESLQSYC--HTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNN---IVHDDLKPANIFTTSDWTSCKLTDF  267 (524)
T ss_pred             eeeecccc-chhHHhh--hcccccCCchhhhhHHhhhhhcccccccccCCCc---ccccccchhheecccccceeecCCc
Confidence            99999986 4554444  234456788888899999989    999999987   9999999999999999 88999999


Q ss_pred             ccccccCCCccccc---ccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhcc
Q 003786          622 GMARIFGGDELQSK---TKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWK  698 (795)
Q Consensus       622 Gla~~~~~~~~~~~---~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~  698 (795)
                      |+...++.......   ..+..|...|++||.++ +.++.+.|+|++|.++.+-.++....-..-.          ..|.
T Consensus       268 ~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~----------~~W~  336 (524)
T KOG0601|consen  268 GLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKN----------SSWS  336 (524)
T ss_pred             ceeEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCC----------CCcc
Confidence            99998866543221   23346788999999775 5678899999999999999988765432110          1111


Q ss_pred             CcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          699 DDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       699 ~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      +.+...     +..+.......++..++.++++.+|..|++.+.+..+
T Consensus       337 ~~r~~~-----ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l  379 (524)
T KOG0601|consen  337 QLRQGY-----IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTAL  379 (524)
T ss_pred             cccccc-----CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence            111111     1111111122344458889999999999999888764

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.26  E-value=6.4e-12  Score=142.22  Aligned_cols=145  Identities=18%  Similarity=0.215  Sum_probs=94.0

Q ss_pred             ccCCccccccCcCCcccEEEeEecC-cceEEEEEecccCccc----------------------------------hH--
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQG----------------------------------QE--  516 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~----------------------------------~~--  516 (795)
                      ..+|+. +.||+|++|.||+|++.+ |++||||++++.....                                  .+  
T Consensus       119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l  197 (537)
T PRK04750        119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL  197 (537)
T ss_pred             HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence            456776 799999999999999887 9999999997542100                                  11  


Q ss_pred             ----HHHHHHHHHHhcC----Ccccceeeeeeee-cceeeEEeecCCCCChhhhhhccCC---cccCChhhHHHHHHHHH
Q 003786          517 ----EFKNEIKLIAKLQ----HRNLVRLLGCCIE-LEEKILIYEYMPNKSLDFFLFDSTK---ENLLGWGTRVRIIEGIA  584 (795)
Q Consensus       517 ----~~~~E~~~l~~l~----h~niv~l~~~~~~-~~~~~lv~E~~~~gsL~~~l~~~~~---~~~l~~~~~~~i~~~i~  584 (795)
                          .+.+|+..+.++.    +...+.+..++.+ ....+|||||++|+.+.++..-...   .+.+....+..++.|  
T Consensus       198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Q--  275 (537)
T PRK04750        198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQ--  275 (537)
T ss_pred             HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHH--
Confidence                1233444444442    3333444344332 4567899999999999764211111   011222222223333  


Q ss_pred             HHHHHHHhcCCCcEEeccCCCCcEEECCCC----CeeeeccccccccCC
Q 003786          585 QGLLYLHQYSRLRVIHRDLKASNILLDKDM----NPKISDFGMARIFGG  629 (795)
Q Consensus       585 ~~l~~LH~~~~~~iiHrDikp~NIll~~~~----~vkL~DFGla~~~~~  629 (795)
                           ++..|   ++|+|+||.||+++.++    .+++.|||++..++.
T Consensus       276 -----if~~G---ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~  316 (537)
T PRK04750        276 -----VFRDG---FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK  316 (537)
T ss_pred             -----HHhCC---eeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence                 33455   99999999999999988    999999999987643

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.12  E-value=5e-10  Score=110.48  Aligned_cols=138  Identities=13%  Similarity=0.124  Sum_probs=98.7

Q ss_pred             ccccCcCCcccEEEeEecC-------cceEEEEEecccC------------c----------cchHHHH----HHHHHHH
Q 003786          480 ENKLGEGGFGPVYKGRLLN-------GQEVAVKRLSSQS------------G----------QGQEEFK----NEIKLIA  526 (795)
Q Consensus       480 ~~~LG~G~~g~Vy~~~~~~-------~~~vavK~~~~~~------------~----------~~~~~~~----~E~~~l~  526 (795)
                      ...||.|.-+.||.|...+       +..+|||+++...            .          .....++    +|++.|+
T Consensus         2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~   81 (197)
T cd05146           2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK   81 (197)
T ss_pred             CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence            3579999999999997543       4789999875311            0          0012233    7999999


Q ss_pred             hcCC--cccceeeeeeeecceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHH-HhcCCCcEEeccC
Q 003786          527 KLQH--RNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYL-HQYSRLRVIHRDL  603 (795)
Q Consensus       527 ~l~h--~niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~L-H~~~~~~iiHrDi  603 (795)
                      ++..  -++.+++++    ...++||||+.+..+..-.   .+...++......+..+++.+|..| |..+   |||+||
T Consensus        82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~---Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~g---lVHGDL  151 (197)
T cd05146          82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPK---LKDAKLNDEEMKNAYYQVLSMMKQLYKECN---LVHADL  151 (197)
T ss_pred             HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchh---hhccccCHHHHHHHHHHHHHHHHHHHHhCC---eecCCC
Confidence            9864  455566654    5678999999875442111   1112244456677889999999999 7777   999999


Q ss_pred             CCCcEEECCCCCeeeeccccccccC
Q 003786          604 KASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       604 kp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      ++.|||++ ++.+.|+|||.+....
T Consensus       152 s~~NIL~~-~~~v~iIDF~qav~~~  175 (197)
T cd05146         152 SEYNMLWH-DGKVWFIDVSQSVEPT  175 (197)
T ss_pred             CHHHEEEE-CCcEEEEECCCceeCC
Confidence            99999996 5789999999987653

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=99.11  E-value=4.3e-10  Score=125.22  Aligned_cols=166  Identities=19%  Similarity=0.232  Sum_probs=126.3

Q ss_pred             ecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCCCCChhhhhhccCCcccCChhh
Q 003786          496 LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGT  575 (795)
Q Consensus       496 ~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~  575 (795)
                      ..++.+|.|..+........+..++-++.|+.++||||+++++.+.++...|+|+|-+.  .|..++..      +....
T Consensus        34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~------l~~~~  105 (690)
T KOG1243|consen   34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE------LGKEE  105 (690)
T ss_pred             eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH------hHHHH
Confidence            44688999998876655445668888999999999999999999999999999999874  34444422      23556


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcccccccccccccccccccccccCC
Q 003786          576 RVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGL  655 (795)
Q Consensus       576 ~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~  655 (795)
                      ...-+.||++||.+||+.+  +++|++|....|+|+..|+.||++|.++........  ......--..|..|+.+....
T Consensus       106 v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~--~~~~~~~~~s~~~P~~~~~s~  181 (690)
T KOG1243|consen  106 VCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA--PAKSLYLIESFDDPEEIDPSE  181 (690)
T ss_pred             HHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--ccccchhhhcccChhhcCccc
Confidence            6778899999999999766  699999999999999999999999999865433221  111112223455666543222


Q ss_pred             CCcccchhhHHHHHHHHHhC
Q 003786          656 FSIKSDVFSFGVLLLETLSS  675 (795)
Q Consensus       656 ~~~k~DvwSlGvil~elltG  675 (795)
                        -..|.|-||++++|++.|
T Consensus       182 --~s~D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  182 --WSIDSWGLGCLIEELFNG  199 (690)
T ss_pred             --cchhhhhHHHHHHHHhCc
Confidence              456999999999999998

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.09  E-value=8.8e-11  Score=129.67  Aligned_cols=249  Identities=20%  Similarity=0.193  Sum_probs=177.2

Q ss_pred             HHccCCccccccCcCCcccEEEeEe--cCcceEEEEEecccCccchHHH--HHHHHHHHhc-CCcccceeeeeeeeccee
Q 003786          472 AATANFSTENKLGEGGFGPVYKGRL--LNGQEVAVKRLSSQSGQGQEEF--KNEIKLIAKL-QHRNLVRLLGCCIELEEK  546 (795)
Q Consensus       472 ~~~~~~~~~~~LG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~--~~E~~~l~~l-~h~niv~l~~~~~~~~~~  546 (795)
                      ..+.+|..+..||.|.|+.|+....  .++..|++|.+.........++  ..|+.+...+ .|.++++.+..+....+.
T Consensus       262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~  341 (524)
T KOG0601|consen  262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQG  341 (524)
T ss_pred             eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccc
Confidence            3457899999999999999999864  3577899998765433333332  3577666666 489999998888888888


Q ss_pred             eEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCC-CCeeeecccccc
Q 003786          547 ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKD-MNPKISDFGMAR  625 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~-~~vkL~DFGla~  625 (795)
                      ++=-|||.++++...+   .-...+++...+++..|++.++.++|++.   ++|+|+||+||++..+ +.-++.|||...
T Consensus       342 ~ip~e~~~~~s~~l~~---~~~~~~d~~~~~~~~~q~~~~l~~i~s~~---~~~~d~~psni~i~~~~~~~~~~~~~~~t  415 (524)
T KOG0601|consen  342 YIPLEFCEGGSSSLRS---VTSQMLDEDPRLRLTAQILTALNVIHSKL---FVHLDVKPSNILISNDGFFSKLGDFGCWT  415 (524)
T ss_pred             cCchhhhcCcchhhhh---HHHHhcCcchhhhhHHHHHhccccccchh---hhcccccccceeeccchhhhhcccccccc
Confidence            8999999999987665   22234777888999999999999999987   9999999999999876 788999999986


Q ss_pred             ccCCCcccccccccccccccc--cccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccc
Q 003786          626 IFGGDELQSKTKRIVGTYGYM--SPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAW  703 (795)
Q Consensus       626 ~~~~~~~~~~~~~~~gt~~y~--APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~  703 (795)
                      .+.-.     .....+.-.++  +|+......+-.++|++|||.-+.|.+++..-.+.. ...                .
T Consensus       416 ~~~~~-----~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~-~~~----------------~  473 (524)
T KOG0601|consen  416 RLAFS-----SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESG-VQS----------------L  473 (524)
T ss_pred             cccee-----cccccccccccccchhhccccccccccccccccccccccccCcccCccc-ccc----------------e
Confidence            32110     11122333444  555566678899999999999999999886432210 000                0


Q ss_pred             cccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          704 ELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       704 ~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                      . +........+... +.+..+...++..++..||.+.++..+.+..
T Consensus       474 ~-i~~~~~p~~~~~~-~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~  518 (524)
T KOG0601|consen  474 T-IRSGDTPNLPGLK-LQLQVLLKVMINPDRKRRPSAVELSLHSEFY  518 (524)
T ss_pred             e-eecccccCCCchH-HhhhhhhhhhcCCccccchhhhhhcccchhh
Confidence            0 0001011111112 4555667778999999999999988776553

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.08  E-value=8.3e-10  Score=112.68  Aligned_cols=142  Identities=18%  Similarity=0.263  Sum_probs=109.4

Q ss_pred             cccCcCCcccEEEeEecCcceEEEEEecccCc-cchHHHHHHHHHHHhcCCc--ccceeeeeeeecc---eeeEEeecCC
Q 003786          481 NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHR--NLVRLLGCCIELE---EKILIYEYMP  554 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~--niv~l~~~~~~~~---~~~lv~E~~~  554 (795)
                      +.|+.|..+.||+++..+|+.+++|+...... .....+.+|+++++.+.+.  .+.+++.+.....   ..++||||++
T Consensus         4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~   83 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD   83 (223)
T ss_pred             eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence            57999999999999876678999999865432 2456789999999999763  4566777766542   5689999999


Q ss_pred             CCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcC----------------------------------------
Q 003786          555 NKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS----------------------------------------  594 (795)
Q Consensus       555 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~----------------------------------------  594 (795)
                      |.++...+..    ..+++.....++.+++++|..||+..                                        
T Consensus        84 G~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (223)
T cd05154          84 GRVLRDRLLR----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMER  159 (223)
T ss_pred             CEecCCCCCC----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHH
Confidence            9988665421    23566677778888888888888531                                        


Q ss_pred             -------------CCcEEeccCCCCcEEECC--CCCeeeeccccccc
Q 003786          595 -------------RLRVIHRDLKASNILLDK--DMNPKISDFGMARI  626 (795)
Q Consensus       595 -------------~~~iiHrDikp~NIll~~--~~~vkL~DFGla~~  626 (795)
                                   ...++|+|++|.||+++.  ++.+.|+||+.+..
T Consensus       160 ~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~  206 (223)
T cd05154         160 LLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL  206 (223)
T ss_pred             HHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence                         245899999999999998  56789999998864

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.01  E-value=2.6e-09  Score=101.65  Aligned_cols=131  Identities=20%  Similarity=0.345  Sum_probs=102.6

Q ss_pred             cccCcCCcccEEEeEecCcceEEEEE-ecccC--cc-----chHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          481 NKLGEGGFGPVYKGRLLNGQEVAVKR-LSSQS--GQ-----GQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~~~~~vavK~-~~~~~--~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      ..+++|+-+.+|.+.. -|..+++|. +.+.-  ++     ..++..+|+.+|.+++--.|.-.+=+..+.+...++|||
T Consensus         2 ~~i~~GAEa~i~~~~~-~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~   80 (204)
T COG3642           2 DLIKQGAEAIIYLTDF-LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY   80 (204)
T ss_pred             chhhCCcceeEEeeec-cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence            4688999999999966 344566664 33321  11     124567899999999877777666677788889999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                      ++|..|.+.+...          ...++..+-..+.-||..+   |+|+||.++||++..+. +.++||||+..
T Consensus        81 I~G~~lkd~l~~~----------~~~~~r~vG~~vg~lH~~g---ivHGDLTtsNiIl~~~~-i~~IDfGLg~~  140 (204)
T COG3642          81 IEGELLKDALEEA----------RPDLLREVGRLVGKLHKAG---IVHGDLTTSNIILSGGR-IYFIDFGLGEF  140 (204)
T ss_pred             eCChhHHHHHHhc----------chHHHHHHHHHHHHHHhcC---eecCCCccceEEEeCCc-EEEEECCcccc
Confidence            9999999888432          2567788888899999998   99999999999997665 99999999874

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.96  E-value=3.6e-09  Score=99.99  Aligned_cols=143  Identities=22%  Similarity=0.327  Sum_probs=108.3

Q ss_pred             cccccCcCCcccEEEeEecCcceEEEEE-ecccC-------ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          479 TENKLGEGGFGPVYKGRLLNGQEVAVKR-LSSQS-------GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       479 ~~~~LG~G~~g~Vy~~~~~~~~~vavK~-~~~~~-------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      ....|-||+-+.|+++.. .|+...||. +.+.-       .....+.++|++.|.+++--.|.-..=++.+.....++|
T Consensus        11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M   89 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM   89 (229)
T ss_pred             cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence            456889999999999987 567777773 33321       123456789999999998777766666777888889999


Q ss_pred             ecCCC-CChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCC---Ceeeeccccccc
Q 003786          551 EYMPN-KSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDM---NPKISDFGMARI  626 (795)
Q Consensus       551 E~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~---~vkL~DFGla~~  626 (795)
                      ||+++ .++.+++...-... ........++..|-+.+.-||..+   |||+||..+||+|..++   .+.++|||++..
T Consensus        90 E~~~g~~~vk~~i~~~~~~~-~~d~~~~~~~~~iG~~igklH~nd---iiHGDLTTSNill~~~~~~~~~~lIdfgls~~  165 (229)
T KOG3087|consen   90 EFIDGASTVKDFILSTMEDE-SEDEGLAELARRIGELIGKLHDND---IIHGDLTTSNILLRSDGNQITPILIDFGLSSV  165 (229)
T ss_pred             EeccchhHHHHHHHHHccCc-ccchhHHHHHHHHHHHHHHhhhCC---eecccccccceEEecCCCcCceEEEeecchhc
Confidence            99988 46777775433332 223333688899999999999988   99999999999997655   358999999864

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.94  E-value=3.2e-10  Score=131.19  Aligned_cols=251  Identities=19%  Similarity=0.203  Sum_probs=176.3

Q ss_pred             HHccCCccccccCcCCcccEEEeEec-CcceEEEEEeccc---CccchHHHHHHHHHHHhcCCcccceeeeeeeecceee
Q 003786          472 AATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQ---SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKI  547 (795)
Q Consensus       472 ~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  547 (795)
                      ...+.+.+.+.+-+|.++.++.++-. .|...++|.....   .....+....+-.++-.-+||.+++...-+......+
T Consensus       801 sS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~  880 (1205)
T KOG0606|consen  801 SSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLP  880 (1205)
T ss_pred             CCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcc
Confidence            45577888899999999999988632 3444444443222   2233444555555555556788887777677778899


Q ss_pred             EEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccccc
Q 003786          548 LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF  627 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~  627 (795)
                      ||++|..+++|...++...   ..+.+.+...+..+.+++.|||...   +.|||++|.|++...+++.+++|||+....
T Consensus       881 L~~~~~~~~~~~Skl~~~~---~~saepaRs~i~~~vqs~e~L~s~~---r~h~~~~p~~~l~~~~gh~~l~~~~t~~~v  954 (1205)
T KOG0606|consen  881 LVGHYLNGGDLPSKLHNSG---CLSAEPARSPILERVQSLESLHSSL---RKHRDLKPDSLLIAYDGHRPLTDFGTLSKV  954 (1205)
T ss_pred             hhhHHhccCCchhhhhcCC---CcccccccchhHHHHhhhhccccch---hhcccccccchhhcccCCcccCcccccccc
Confidence            9999999999988875433   4566667777788899999999875   899999999999999999999999854322


Q ss_pred             CC-------------------------Cccc----ccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCC
Q 003786          628 GG-------------------------DELQ----SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRN  678 (795)
Q Consensus       628 ~~-------------------------~~~~----~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p  678 (795)
                      ..                         ....    .......||+.|.+||.+.+......+|+|+.|++++|.++|..|
T Consensus       955 g~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp 1034 (1205)
T KOG0606|consen  955 GLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPP 1034 (1205)
T ss_pred             ccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCC
Confidence            10                         0000    112345789999999999999999999999999999999999999


Q ss_pred             CCCCCCcchhHhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHH
Q 003786          679 TDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMF  741 (795)
Q Consensus       679 ~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~  741 (795)
                      |.........  .   .+......+        ...+........+++...+..+|.+|-.|.
T Consensus      1035 ~na~tpq~~f--~---ni~~~~~~~--------p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1035 FNAETPQQIF--E---NILNRDIPW--------PEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred             CCCcchhhhh--h---ccccCCCCC--------CCCccccChhhhhhhhhhhccCchhccCcc
Confidence            8654322221  0   000000000        112223344566778888899999998776

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=98.90  E-value=4e-08  Score=106.31  Aligned_cols=169  Identities=21%  Similarity=0.304  Sum_probs=130.1

Q ss_pred             cccEEEeEe-cCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeee----ecceeeEEeecCCC-CChhhh
Q 003786          488 FGPVYKGRL-LNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCI----ELEEKILIYEYMPN-KSLDFF  561 (795)
Q Consensus       488 ~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~----~~~~~~lv~E~~~~-gsL~~~  561 (795)
                      -.+.|++.. .+|..|++|+++....+.......-+++++++.|+|||++.++|.    .+..+++||+|.|+ ++|.+.
T Consensus       289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~  368 (655)
T KOG3741|consen  289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL  368 (655)
T ss_pred             cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence            356788874 579999999996555555555666789999999999999999887    34567899999986 566555


Q ss_pred             hhccC------------CcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          562 LFDST------------KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       562 l~~~~------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      -+...            .....++..++.++.|+..||.++|+.|   +.-+-|.|.+||++.+.+++|+..|+......
T Consensus       369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG---LAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~  445 (655)
T KOG3741|consen  369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG---LACKTLDLKKILVTGKMRIRISGCGIMDVLQE  445 (655)
T ss_pred             HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC---ceeecccHhHeEeeCcceEEEecccceeeecC
Confidence            54322            2234677899999999999999999998   88899999999999999999999888776543


Q ss_pred             CcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCC
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRN  678 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p  678 (795)
                      +..                |.+.+   -.+-|.=.||.+++.|.+|...
T Consensus       446 d~~----------------~~le~---~Qq~D~~~lG~ll~aLAt~~~n  475 (655)
T KOG3741|consen  446 DPT----------------EPLES---QQQNDLRDLGLLLLALATGTEN  475 (655)
T ss_pred             CCC----------------cchhH---HhhhhHHHHHHHHHHHhhcccc
Confidence            320                11111   1345888999999999999654

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.83  E-value=3.8e-08  Score=96.89  Aligned_cols=126  Identities=25%  Similarity=0.321  Sum_probs=84.3

Q ss_pred             cEEEeEecCcceEEEEEecccCc---------------------c-----chHHHHHHHHHHHhcCCcc--cceeeeeee
Q 003786          490 PVYKGRLLNGQEVAVKRLSSQSG---------------------Q-----GQEEFKNEIKLIAKLQHRN--LVRLLGCCI  541 (795)
Q Consensus       490 ~Vy~~~~~~~~~vavK~~~~~~~---------------------~-----~~~~~~~E~~~l~~l~h~n--iv~l~~~~~  541 (795)
                      .||.|...+|..+|||+.+....                     .     .....++|++.|.++..-+  +.+++++  
T Consensus         1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~--   78 (188)
T PF01163_consen    1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY--   78 (188)
T ss_dssp             EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE--
T ss_pred             CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE--
Confidence            38999988899999998754210                     0     0123568999999998664  5556544  


Q ss_pred             ecceeeEEeecCC--CCChhhhhhccCCcccCChhhHHHHHHHHHHHHHH-HHhcCCCcEEeccCCCCcEEECCCCCeee
Q 003786          542 ELEEKILIYEYMP--NKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLY-LHQYSRLRVIHRDLKASNILLDKDMNPKI  618 (795)
Q Consensus       542 ~~~~~~lv~E~~~--~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~-LH~~~~~~iiHrDikp~NIll~~~~~vkL  618 (795)
                        ....+||||++  |..+..+....     ++......++.+++..+.. +|..|   |+|+||.+.|||++++ .+.|
T Consensus        79 --~~~~ivME~I~~~G~~~~~l~~~~-----~~~~~~~~~~~~il~~~~~~~~~~g---ivHGDLs~~NIlv~~~-~~~i  147 (188)
T PF01163_consen   79 --NRNVIVMEYIGEDGVPLPRLKDVD-----LSPEEPKELLEEILEEIIKMLHKAG---IVHGDLSEYNILVDDG-KVYI  147 (188)
T ss_dssp             --ETTEEEEE--EETTEEGGCHHHCG-----GGGSTHHHHHHHHHHHHHHHHHCTT---EEESS-STTSEEEETT-CEEE
T ss_pred             --eCCEEEEEecCCCccchhhHHhcc-----ccchhHHHHHHHHHHHHHHHHHhcC---ceecCCChhhEEeecc-eEEE
Confidence              35679999999  65554433111     1245667788888886655 56777   9999999999999888 9999


Q ss_pred             eccccccccC
Q 003786          619 SDFGMARIFG  628 (795)
Q Consensus       619 ~DFGla~~~~  628 (795)
                      +|||.+....
T Consensus       148 IDf~qav~~~  157 (188)
T PF01163_consen  148 IDFGQAVDSS  157 (188)
T ss_dssp             --GTTEEETT
T ss_pred             EecCcceecC
Confidence            9999987643

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.80  E-value=1e-07  Score=100.60  Aligned_cols=193  Identities=16%  Similarity=0.159  Sum_probs=130.8

Q ss_pred             CccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhc-CCcccce--------eeeeeeecceee
Q 003786          477 FSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKL-QHRNLVR--------LLGCCIELEEKI  547 (795)
Q Consensus       477 ~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~--------l~~~~~~~~~~~  547 (795)
                      ...++.||+|+-+.+|-.-.  -...+.|+++........+...   .|.+. .||-+-.        |+|- .......
T Consensus        13 i~~gr~LgqGgea~ly~l~e--~~d~VAKIYh~Pppa~~aqk~a---~la~~p~~p~~~~rvaWPqa~L~G~-~~~~~iG   86 (637)
T COG4248          13 IPPGRPLGQGGEADLYTLGE--VRDQVAKIYHAPPPAAQAQKVA---ELAATPDAPLLNYRVAWPQATLHGG-RRGKVIG   86 (637)
T ss_pred             cCCCccccCCccceeeecch--hhchhheeecCCCchHHHHHHH---HhccCCCCcchhhhhcccHHHhhCC-CccceeE
Confidence            45578899999999997532  2334568887654433333222   23222 4554332        1121 1222366


Q ss_pred             EEeecCCCCCh-hhhhhcc---CCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccc
Q 003786          548 LIYEYMPNKSL-DFFLFDS---TKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGM  623 (795)
Q Consensus       548 lv~E~~~~gsL-~~~l~~~---~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGl  623 (795)
                      ++|..+++..= ..++...   .......|.-+.+.++.++.+.+.||..|   .+-+|+.++|+|+.+++.|.|.|=..
T Consensus        87 flmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~G---h~vGDVn~~~~lVsd~~~V~LVdsDs  163 (637)
T COG4248          87 FLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHG---HVVGDVNQNSFLVSDDSKVVLVDSDS  163 (637)
T ss_pred             EecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcC---CcccccCccceeeecCceEEEEcccc
Confidence            88888877532 2333222   22345788999999999999999999998   88999999999999999999998554


Q ss_pred             ccccCCCcccccccccccccccccccccc-----cCCCCcccchhhHHHHHHHHHhC-CCCCCC
Q 003786          624 ARIFGGDELQSKTKRIVGTYGYMSPEYAQ-----QGLFSIKSDVFSFGVLLLETLSS-KRNTDF  681 (795)
Q Consensus       624 a~~~~~~~~~~~~~~~~gt~~y~APE~~~-----~~~~~~k~DvwSlGvil~elltG-~~p~~~  681 (795)
                      ..+..+.   ....-.+|..+|.+||...     +..-+...|.|.|||++++++.| ++|+.+
T Consensus       164 fqi~~ng---~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysG  224 (637)
T COG4248         164 FQINANG---TLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSG  224 (637)
T ss_pred             eeeccCC---ceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCc
Confidence            4332211   1222357899999999764     34557789999999999999987 888864

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.76  E-value=7.5e-08  Score=100.51  Aligned_cols=134  Identities=18%  Similarity=0.140  Sum_probs=96.7

Q ss_pred             cccEEEeEecCcceEEEEEecccCc-----------cchHHHHHHHHHHHhcCCccc--ceeeeeeee-----cceeeEE
Q 003786          488 FGPVYKGRLLNGQEVAVKRLSSQSG-----------QGQEEFKNEIKLIAKLQHRNL--VRLLGCCIE-----LEEKILI  549 (795)
Q Consensus       488 ~g~Vy~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~E~~~l~~l~h~ni--v~l~~~~~~-----~~~~~lv  549 (795)
                      ...|+++.. +|+.|.||.......           .....+.+|...+.+|...+|  .+++++...     ....++|
T Consensus        35 ~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LV  113 (268)
T PRK15123         35 GRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFII  113 (268)
T ss_pred             CceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEE
Confidence            334666654 677899997643220           112247899999999864443  344555543     2357899


Q ss_pred             eecCCCC-ChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECC-------CCCeeeecc
Q 003786          550 YEYMPNK-SLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDK-------DMNPKISDF  621 (795)
Q Consensus       550 ~E~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~-------~~~vkL~DF  621 (795)
                      +|++++. +|.+++.... ....+......++.++++.+.-||..|   |+|+|+++.|||++.       ++.+.|+||
T Consensus       114 te~l~~~~sL~~~~~~~~-~~~~~~~~~~~ll~~la~~i~~LH~~G---i~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl  189 (268)
T PRK15123        114 TEDLAPTISLEDYCADWA-TNPPDPRLKRMLIKRVATMVRDMHAAG---INHRDCYICHFLLHLPFPGREEDLKLSVIDL  189 (268)
T ss_pred             EeeCCCCccHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHHCc---CccCCCChhhEEEeccccCCCCCceEEEEEC
Confidence            9999986 8888874321 123455677789999999999999998   999999999999975       467999999


Q ss_pred             ccccc
Q 003786          622 GMARI  626 (795)
Q Consensus       622 Gla~~  626 (795)
                      +.+..
T Consensus       190 ~r~~~  194 (268)
T PRK15123        190 HRAQI  194 (268)
T ss_pred             Ccccc
Confidence            99864

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.68  E-value=1.5e-07  Score=94.99  Aligned_cols=136  Identities=20%  Similarity=0.218  Sum_probs=99.7

Q ss_pred             CccccccCcCCcccEEEeEecCcceEEEEEecccC----------------------ccchHHHHHHHHHHHhcCCc--c
Q 003786          477 FSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQS----------------------GQGQEEFKNEIKLIAKLQHR--N  532 (795)
Q Consensus       477 ~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~----------------------~~~~~~~~~E~~~l~~l~h~--n  532 (795)
                      ..++.+||-|.-+.||.|..+.|.++|||.-+...                      .......++|.++|.+|.-.  .
T Consensus        93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~  172 (304)
T COG0478          93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK  172 (304)
T ss_pred             HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence            46678999999999999999999999999543210                      01123457899999999755  5


Q ss_pred             cceeeeeeeecceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECC
Q 003786          533 LVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDK  612 (795)
Q Consensus       533 iv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~  612 (795)
                      +.+.+++    +...+||||++|-.|...-        ++.+....++..|+.-+.-+-..|   |||+|+.+-||++++
T Consensus       173 VP~P~~~----nRHaVvMe~ieG~eL~~~r--------~~~en~~~il~~il~~~~~~~~~G---iVHGDlSefNIlV~~  237 (304)
T COG0478         173 VPKPIAW----NRHAVVMEYIEGVELYRLR--------LDVENPDEILDKILEEVRKAYRRG---IVHGDLSEFNILVTE  237 (304)
T ss_pred             CCCcccc----ccceeeeehcccceeeccc--------CcccCHHHHHHHHHHHHHHHHHcC---ccccCCchheEEEec
Confidence            6666544    5567999999997774332        123444455555555555555556   999999999999999


Q ss_pred             CCCeeeecccccccc
Q 003786          613 DMNPKISDFGMARIF  627 (795)
Q Consensus       613 ~~~vkL~DFGla~~~  627 (795)
                      +|.+.++||--+...
T Consensus       238 dg~~~vIDwPQ~v~~  252 (304)
T COG0478         238 DGDIVVIDWPQAVPI  252 (304)
T ss_pred             CCCEEEEeCcccccC
Confidence            999999999776643

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.53  E-value=1.7e-08  Score=113.28  Aligned_cols=155  Identities=21%  Similarity=0.288  Sum_probs=104.0

Q ss_pred             HHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc------c-ccccccccccccccccccc
Q 003786          580 IEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL------Q-SKTKRIVGTYGYMSPEYAQ  652 (795)
Q Consensus       580 ~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~------~-~~~~~~~gt~~y~APE~~~  652 (795)
                      +.+++.|+.|+|..-  .+||+.|.|++|.++..+..||+.|+.+....+...      . .......-...|.|||++.
T Consensus       105 l~~v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~  182 (700)
T KOG2137|consen  105 LGNVADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL  182 (700)
T ss_pred             hhcccchhhhhccCc--ceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence            445568999999864  799999999999999999999999999875543111      0 0011123456899999999


Q ss_pred             cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccC
Q 003786          653 QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQE  732 (795)
Q Consensus       653 ~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~  732 (795)
                      ....+.++|++|+||++|.+..|+.+.-........+.. . .        ...+... ...+...+.++.+=+.+++..
T Consensus       183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~-~-~--------~~~~~~~-~~~s~~~p~el~~~l~k~l~~  251 (700)
T KOG2137|consen  183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSF-S-R--------NLLNAGA-FGYSNNLPSELRESLKKLLNG  251 (700)
T ss_pred             cccccccccceeeeeEEEEEecCCcchhhccCCcchhhh-h-h--------ccccccc-ccccccCcHHHHHHHHHHhcC
Confidence            988999999999999999999655543221111111000 0 0        0001000 111234455666677789999


Q ss_pred             CCCCCCCHHHHHHHH
Q 003786          733 DAADRPTMFEVVSML  747 (795)
Q Consensus       733 dP~~RPt~~evl~~L  747 (795)
                      ++.-||++.++....
T Consensus       252 ~~~~rp~~~~l~~~~  266 (700)
T KOG2137|consen  252 DSAVRPTLDLLLSIP  266 (700)
T ss_pred             CcccCcchhhhhccc
Confidence            999999888887654

>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity

Probab=98.45  E-value=1.5e-06  Score=78.36  Aligned_cols=100  Identities=24%  Similarity=0.380  Sum_probs=68.7

Q ss_pred             CeEEeCCCeEEEEEeCCCCCCceEEEEEeccCCCeEEEec-CCCCCCccCcceEEEeeCCceEEeCCCCceEEeecCCCC
Q 003786           38 EKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPDTIVWVA-NRNSPIFDSNAVLTISNGGKLVLLNQTNGTIWSSNLSRE  116 (795)
Q Consensus        38 ~~l~s~~g~f~lgf~~~~~~~~~~~~iw~~~~~~t~vW~a-n~~~p~~~~~~~l~~~~~g~lvl~~~~~~~~Wst~~~~~  116 (795)
                      +.+.+.+|.+.|-|..+|+     |.|...  ..+++|.+ +...... ..+.+.|+.||||||+|..+.++|+|..  .
T Consensus        12 ~p~~~~s~~~~L~l~~dGn-----Lvl~~~--~~~~iWss~~t~~~~~-~~~~~~L~~~GNlvl~d~~~~~lW~Sf~--~   81 (114)
T PF01453_consen   12 SPLTSSSGNYTLILQSDGN-----LVLYDS--NGSVIWSSNNTSGRGN-SGCYLVLQDDGNLVLYDSSGNVLWQSFD--Y   81 (114)
T ss_dssp             EEEEECETTEEEEEETTSE-----EEEEET--TTEEEEE--S-TTSS--SSEEEEEETTSEEEEEETTSEEEEESTT--S
T ss_pred             cccccccccccceECCCCe-----EEEEcC--CCCEEEEecccCCccc-cCeEEEEeCCCCEEEEeecceEEEeecC--C
Confidence            4555655899999999885     344322  25779999 5444422 5789999999999999999999999943  3


Q ss_pred             ccccEEEEcc--CCCeEEeecCCCCCcccceecccCCCc
Q 003786          117 VKNPVAQLLD--TGNLVVRDNFSSNSSEDYLWQSFDHPS  153 (795)
Q Consensus       117 ~~~~~a~l~d--~GNlvl~~~~~~~~~~~~~WqSFd~PT  153 (795)
                      ....+...++  +||++ +.     ....+.|.|=+.|+
T Consensus        82 ptdt~L~~q~l~~~~~~-~~-----~~~~~sw~s~~dps  114 (114)
T PF01453_consen   82 PTDTLLPGQKLGDGNVT-GK-----NDSLTSWSSNTDPS  114 (114)
T ss_dssp             SS-EEEEEET--TSEEE-EE-----STSSEEEESS----
T ss_pred             CccEEEeccCcccCCCc-cc-----cceEEeECCCCCCC
Confidence            3456667888  99999 75     34578898876663

Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....

>PRK09902 hypothetical protein; Provisional

Probab=98.45  E-value=2.2e-06  Score=84.95  Aligned_cols=147  Identities=16%  Similarity=0.184  Sum_probs=105.4

Q ss_pred             cCCccccccCcCCcccEEEeEecCcceEEEEEecc------cCccchHHHHHHHHHHHhcCCcc--cceeeeeeee----
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSS------QSGQGQEEFKNEIKLIAKLQHRN--LVRLLGCCIE----  542 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~------~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~----  542 (795)
                      .++-..---|+||-+-|+...+ +|+.+-+|+-..      ..+.+...|.+|...|.+|...+  +.++...-..    
T Consensus        18 ~~wve~pN~~rgG~SgV~r~~~-~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~   96 (216)
T PRK09902         18 GDWVEEPNYRRNGMSGVQCVER-NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEG   96 (216)
T ss_pred             CceecCCCcCCCCcceEEEEEe-CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCC
Confidence            3333333457799999999876 344688887641      11456788999999999996433  4444422111    


Q ss_pred             cceeeEEeecCCC-CChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCC--eeee
Q 003786          543 LEEKILIYEYMPN-KSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMN--PKIS  619 (795)
Q Consensus       543 ~~~~~lv~E~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~--vkL~  619 (795)
                      ....+||+|-+++ -+|++++.... ....+......++.+++++++-||+.+   +.|+|+.+.||+++.++.  ++++
T Consensus        97 ~~rA~LVTe~L~g~~~L~~~l~~~~-~~~~~~~~k~~il~~va~~ia~LH~~G---v~Hgdly~khIll~~~g~~~v~lI  172 (216)
T PRK09902         97 EWRALLVTEDMAGFISIADWYAQHA-VSPYSDEVRQAMLKAVALAFKKMHSVN---RQHGCCYVRHIYVKTEGKAEAGFL  172 (216)
T ss_pred             ceEEEEEEEeCCCCccHHHHHhcCC-cCCcchHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHhheeecCCCCeeEEEE
Confidence            2246799997765 57888774322 223566677899999999999999998   999999999999987777  9999


Q ss_pred             ccccccc
Q 003786          620 DFGMARI  626 (795)
Q Consensus       620 DFGla~~  626 (795)
                      ||.-++.
T Consensus       173 DlEk~r~  179 (216)
T PRK09902        173 DLEKSRR  179 (216)
T ss_pred             Ehhccch
Confidence            9987764

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.45  E-value=7.4e-07  Score=89.93  Aligned_cols=123  Identities=24%  Similarity=0.252  Sum_probs=91.4

Q ss_pred             cceEEEEEecccC-------ccchHHHHHHHHHHHhcCCcc--cceeeeeeeec----ceeeEEeecCCCC-Chhhhhhc
Q 003786          499 GQEVAVKRLSSQS-------GQGQEEFKNEIKLIAKLQHRN--LVRLLGCCIEL----EEKILIYEYMPNK-SLDFFLFD  564 (795)
Q Consensus       499 ~~~vavK~~~~~~-------~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~----~~~~lv~E~~~~g-sL~~~l~~  564 (795)
                      ++.+.+|.+....       .....+..+|...+..|...+  +.+.+++....    ...++|+|++++. +|.+++..
T Consensus        32 ~~~y~~k~~~~~~~~~~~~~~~~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~  111 (206)
T PF06293_consen   32 GRRYYRKRLWNKLRRDRLRFPLRRSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQ  111 (206)
T ss_pred             ceEEEECCeechhccchhhhcccchHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHh
Confidence            5566666543211       123457889999988886433  44566665542    2458999999984 78888854


Q ss_pred             cCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCC---Ceeeecccccccc
Q 003786          565 STKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDM---NPKISDFGMARIF  627 (795)
Q Consensus       565 ~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~---~vkL~DFGla~~~  627 (795)
                      ...   .+......++.++++.++-||..|   |+|+|+++.|||++.+.   .+.|+||+-++..
T Consensus       112 ~~~---~~~~~~~~ll~~l~~~i~~lH~~g---i~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~  171 (206)
T PF06293_consen  112 WEQ---LDPSQRRELLRALARLIAKLHDAG---IYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR  171 (206)
T ss_pred             hcc---cchhhHHHHHHHHHHHHHHHHHCc---CCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence            222   556677899999999999999998   99999999999999887   8999999988753

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.38  E-value=3.9e-06  Score=85.78  Aligned_cols=140  Identities=19%  Similarity=0.218  Sum_probs=87.2

Q ss_pred             cccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcc--cceeeeeeeecceeeEEeecCCCCC-
Q 003786          481 NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRN--LVRLLGCCIELEEKILIYEYMPNKS-  557 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~E~~~~gs-  557 (795)
                      .+||+|..+.||+.   .+..+++|......  ....+.+|.++++.+..-.  +.+.+++....+...+|||+++|.. 
T Consensus         7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~   81 (226)
T TIGR02172         7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRS   81 (226)
T ss_pred             eeecCCCCcceeEe---cCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccc
Confidence            57999999999984   35578889886532  4456899999999987544  4567777777777889999999963 


Q ss_pred             hhhhhhc--------------------cCCcccCChhh-HHHHHH----------HHHH-HHHHHHh-cCCCcEEeccCC
Q 003786          558 LDFFLFD--------------------STKENLLGWGT-RVRIIE----------GIAQ-GLLYLHQ-YSRLRVIHRDLK  604 (795)
Q Consensus       558 L~~~l~~--------------------~~~~~~l~~~~-~~~i~~----------~i~~-~l~~LH~-~~~~~iiHrDik  604 (795)
                      +...+..                    ........... ...+..          .+.. ...+|.. .....++|+|+.
T Consensus        82 ~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~  161 (226)
T TIGR02172        82 FSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQ  161 (226)
T ss_pred             hhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCC
Confidence            2211100                    00000001000 000000          0011 1122221 123457999999


Q ss_pred             CCcEEECCCCCeeeeccccccc
Q 003786          605 ASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       605 p~NIll~~~~~vkL~DFGla~~  626 (795)
                      |.||++++++ +.|+||+.+..
T Consensus       162 ~~Nii~~~~~-~~iIDwe~a~~  182 (226)
T TIGR02172       162 IGNLITSGKG-TYWIDLGDFGY  182 (226)
T ss_pred             CCcEEEcCCC-cEEEechhcCc
Confidence            9999999888 99999998864

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.35  E-value=1.4e-06  Score=98.53  Aligned_cols=146  Identities=17%  Similarity=0.224  Sum_probs=93.4

Q ss_pred             cCCccccccCcCCcccEEEeEecCcceEEEEEecccCccc------------------------------hH--------
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQG------------------------------QE--------  516 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~------------------------------~~--------  516 (795)
                      ..|+. +.|+.++-|.||+|++++|++||||+.+..-...                              .+        
T Consensus       126 ~eF~~-~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~  204 (517)
T COG0661         126 SEFEP-EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLRE  204 (517)
T ss_pred             HHcCC-CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHH
Confidence            34443 6899999999999999999999999886532110                              00        


Q ss_pred             --HHHHHHHHHHhcC----Ccccceeeeeee-ecceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHH-HH
Q 003786          517 --EFKNEIKLIAKLQ----HRNLVRLLGCCI-ELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQG-LL  588 (795)
Q Consensus       517 --~~~~E~~~l~~l~----h~niv~l~~~~~-~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~-l~  588 (795)
                        .+.+|...+.++.    +.--+++-..+. -.....|+|||++|..+.+...-..  ..++.   ..++..++++ +.
T Consensus       205 ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~--~g~d~---k~ia~~~~~~f~~  279 (517)
T COG0661         205 ELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS--AGIDR---KELAELLVRAFLR  279 (517)
T ss_pred             HhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh--cCCCH---HHHHHHHHHHHHH
Confidence              1234444444442    222233333333 3567789999999999988752222  12332   2233333222 12


Q ss_pred             HHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       589 ~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      .+-..|   ++|.|..|.||+++.+|++.+.|||+...+..
T Consensus       280 q~~~dg---ffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~  317 (517)
T COG0661         280 QLLRDG---FFHADPHPGNILVRSDGRIVLLDFGIVGRLDP  317 (517)
T ss_pred             HHHhcC---ccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence            222234   99999999999999999999999999876643

>smart00473 PAN_AP divergent subfamily of APPLE domains

Probab=98.33  E-value=1.4e-06  Score=72.74  Aligned_cols=72  Identities=33%  Similarity=0.754  Sum_probs=54.0

Q ss_pred             CceeEeccCCCCcccccccccccCHHHHHHHHHh-cCCeeeeeeccccCCCceeEEec-ccccccccccCCCCCccEEEe
Q 003786          339 DRFIMLDDVKLPDFVEASLNESMNVKECEAECLK-NCTCRAYANSKVTGEGSGCLMWF-GDLIDIRKADDRNNGQSIYIR  416 (795)
Q Consensus       339 d~f~~l~~~~~pd~~~~~~~~~~s~~~C~~~Cl~-nCsC~ay~~~~~~~~~~~c~~w~-gdl~~~~~~~~~~~~~~lylR  416 (795)
                      ..|+.++++.+++..... ....++++|+..|++ +|+|.||+|..   ++.+|.+|. +.+.+...  ....+.++|.|
T Consensus         4 ~~f~~~~~~~l~~~~~~~-~~~~s~~~C~~~C~~~~~~C~s~~y~~---~~~~C~l~~~~~~~~~~~--~~~~~~~~y~~   77 (78)
T smart00473        4 DCFVRLPNTKLPGFSRIV-ISVASLEECASKCLNSNCSCRSFTYNN---GTKGCLLWSESSLGDARL--FPSGGVDLYEK   77 (78)
T ss_pred             ceeEEecCccCCCCccee-EcCCCHHHHHHHhCCCCCceEEEEEcC---CCCEEEEeeCCcccccee--cccCCceeEEe
Confidence            569999999999665432 456799999999999 99999999974   456899999 66665542  33445556654

Apple-like domains present in Plasminogen, C. elegans hypothetical ORFs and the extracellular portion of plant receptor-like protein kinases. Predicted to possess protein- and/or carbohydrate-binding functions.

>smart00108 B_lectin Bulb-type mannose-specific lectin

Probab=98.31  E-value=1.9e-06  Score=78.04  Aligned_cols=87  Identities=26%  Similarity=0.336  Sum_probs=60.4

Q ss_pred             eEEEeeCCceEEeCCC-CceEEeecCCCCc-cccEEEEccCCCeEEeecCCCCCcccceecccCCCchhhhccCeecccc
Q 003786           89 VLTISNGGKLVLLNQT-NGTIWSSNLSREV-KNPVAQLLDTGNLVVRDNFSSNSSEDYLWQSFDHPSDTLLAGMKLGWDL  166 (795)
Q Consensus        89 ~l~~~~~g~lvl~~~~-~~~~Wst~~~~~~-~~~~a~l~d~GNlvl~~~~~~~~~~~~~WqSFd~PTDtlLpgqkl~~~~  166 (795)
                      .+.++.||+||+++.. +.+||++++.... .++.+.|+++|||||++     ..+.++|+|=     |           
T Consensus        23 ~~~~q~dgnlV~~~~~~~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~-----~~g~~vW~S~-----t-----------   81 (114)
T smart00108       23 TLIMQNDYNLILYKSSSRTVVWVANRDNPVSDSCTLTLQSDGNLVLYD-----GDGRVVWSSN-----T-----------   81 (114)
T ss_pred             ccCCCCCEEEEEEECCCCcEEEECCCCCCCCCCEEEEEeCCCCEEEEe-----CCCCEEEEec-----c-----------
Confidence            3556789999999765 5899999986432 33677899999999998     3467889861     1           


Q ss_pred             ccCcceeEEEecCCCCCCCCceEEeeccCCcceEEEEcCceeEEee
Q 003786          167 KTGLERYQTSWKSDDDPSPGNYTHRLDIHVLPKLCTYNGSVKLLCS  212 (795)
Q Consensus       167 ~~~~~~~l~Sw~s~~dps~G~ys~~~~~~~~~~~~~~~~s~~~~~s  212 (795)
                                     ....|.|.+.++.+|...++-..+ ...|.|
T Consensus        82 ---------------~~~~~~~~~~L~ddGnlvl~~~~~-~~~W~S  111 (114)
T smart00108       82 ---------------TGANGNYVLVLLDDGNLVIYDSDG-NFLWQS  111 (114)
T ss_pred             ---------------cCCCCceEEEEeCCCCEEEECCCC-CEEeCC
Confidence                           012456788888888765433223 456754

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.31  E-value=3.9e-06  Score=83.42  Aligned_cols=138  Identities=17%  Similarity=0.178  Sum_probs=93.6

Q ss_pred             HccCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHH---------HHHHHHHhcCCcc---cceeeee-
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFK---------NEIKLIAKLQHRN---LVRLLGC-  539 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~---------~E~~~l~~l~h~n---iv~l~~~-  539 (795)
                      ...+|...+.+-......|.+... +|+.+++|..+......++.|+         +++..+.+++...   +..++.+ 
T Consensus        29 ~~~~~~~~kv~k~~~r~~ValIei-~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~  107 (229)
T PF06176_consen   29 LDNNYKIIKVFKNTKRNYVALIEI-DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAA  107 (229)
T ss_pred             HhCCceEEEeecCCCccEEEEEEE-CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeee
Confidence            346788888888888888877765 6799999988765443333332         3444444443222   2222222 


Q ss_pred             ----eeecceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCC
Q 003786          540 ----CIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMN  615 (795)
Q Consensus       540 ----~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~  615 (795)
                          +......+++|||++|..|.++..       +++    .+...+.+++.-||..|   +.|+|+.|.|++++.++ 
T Consensus       108 ekk~~~~~~~~~ll~EYIeG~~l~d~~~-------i~e----~~~~ki~~~ikqlH~~G---~~HGD~hpgNFlv~~~~-  172 (229)
T PF06176_consen  108 EKKIFRYTSSYVLLMEYIEGVELNDIED-------IDE----DLAEKIVEAIKQLHKHG---FYHGDPHPGNFLVSNNG-  172 (229)
T ss_pred             eeeeccceeEEEEEEEEecCeecccchh-------cCH----HHHHHHHHHHHHHHHcC---CccCCCCcCcEEEECCc-
Confidence                222345578999999988865431       222    34456778899999998   99999999999998655 


Q ss_pred             eeeeccccccc
Q 003786          616 PKISDFGMARI  626 (795)
Q Consensus       616 vkL~DFGla~~  626 (795)
                      ++++||+..+.
T Consensus       173 i~iID~~~k~~  183 (229)
T PF06176_consen  173 IRIIDTQGKRM  183 (229)
T ss_pred             EEEEECccccc
Confidence            99999987653

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=98.21  E-value=3e-07  Score=102.05  Aligned_cols=189  Identities=19%  Similarity=0.116  Sum_probs=136.6

Q ss_pred             ccCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcc-cceeeeeeeecceeeEEeec
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRN-LVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~E~  552 (795)
                      +..+...+-+++|++++++|.+-...+....+.+..     .....-++++|.+++||| .++.++-+..+....+++++
T Consensus       241 ~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~-----~l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i  315 (829)
T KOG0576|consen  241 TKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQ-----TLSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRI  315 (829)
T ss_pred             ccchHHHHHHHHHHhcCCCccCCChhhheeceeecc-----chhhHHHHHHHHHccCCCCcccccccCCcccccchhhhh
Confidence            344555677899999999998754444444555432     255667899999999999 77777777778888999999


Q ss_pred             CCCC-ChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          553 MPNK-SLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       553 ~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      +..+ +-....  ....-.+..-+...+.+.-+++++++|+.-   -+|+|    ||+..+ +..|..||+....+....
T Consensus       316 ~s~~rs~~~~~--~~se~~~~~~~~~~~~r~et~~l~~l~~~~---~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~  385 (829)
T KOG0576|consen  316 CSTGRSSALEM--TVSEIALEQYQFAYPLRKETRPLAELHSSY---KVHRD----NILGSE-EEVKLLDFAVPPQLTRTM  385 (829)
T ss_pred             hcCCccccccC--ChhhHhhhhhhhhhhhhhhccccccccccc---ccCcc----cccccc-cccccccccCCcccCccc
Confidence            9887 221111  011112333344455666678899999853   48898    776654 789999999988765443


Q ss_pred             ccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCC
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTD  680 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~  680 (795)
                         ..+...+++.++|||+.....+..+.|+|++|+--.+|.-|-+|..
T Consensus       386 ---~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~  431 (829)
T KOG0576|consen  386 ---KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRS  431 (829)
T ss_pred             ---ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCC
Confidence               3455789999999999999999999999999998778877776653

>cd00028 B_lectin Bulb-type mannose-specific lectin

Probab=98.17  E-value=5.1e-06  Score=75.44  Aligned_cols=87  Identities=24%  Similarity=0.251  Sum_probs=60.3

Q ss_pred             EEEee-CCceEEeCCC-CceEEeecCCCC-ccccEEEEccCCCeEEeecCCCCCcccceecccCCCchhhhccCeecccc
Q 003786           90 LTISN-GGKLVLLNQT-NGTIWSSNLSRE-VKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQSFDHPSDTLLAGMKLGWDL  166 (795)
Q Consensus        90 l~~~~-~g~lvl~~~~-~~~~Wst~~~~~-~~~~~a~l~d~GNlvl~~~~~~~~~~~~~WqSFd~PTDtlLpgqkl~~~~  166 (795)
                      +.++. ||+||+++.. +.+||++++... ...+.+.|+++|||||++     .++.++|+|=-.               
T Consensus        24 ~~~q~~dgnlv~~~~~~~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~-----~~g~~vW~S~~~---------------   83 (116)
T cd00028          24 LIMQSRDYNLILYKGSSRTVVWVANRDNPSGSSCTLTLQSDGNLVIYD-----GSGTVVWSSNTT---------------   83 (116)
T ss_pred             CCCCCCeEEEEEEeCCCCeEEEECCCCCCCCCCEEEEEecCCCeEEEc-----CCCcEEEEeccc---------------
Confidence            44565 9999999765 589999998652 345667899999999998     356788985321               


Q ss_pred             ccCcceeEEEecCCCCCCCCceEEeeccCCcceEEEEcCceeEEeeC
Q 003786          167 KTGLERYQTSWKSDDDPSPGNYTHRLDIHVLPKLCTYNGSVKLLCSG  213 (795)
Q Consensus       167 ~~~~~~~l~Sw~s~~dps~G~ys~~~~~~~~~~~~~~~~s~~~~~sg  213 (795)
                                      .+.+.+.+.+..+|...++-.+ ...+|.|.
T Consensus        84 ----------------~~~~~~~~~L~ddGnlvl~~~~-~~~~W~Sf  113 (116)
T cd00028          84 ----------------RVNGNYVLVLLDDGNLVLYDSD-GNFLWQSF  113 (116)
T ss_pred             ----------------CCCCceEEEEeCCCCEEEECCC-CCEEEcCC
Confidence                            1245678888888865543333 35577654

The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses.

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=98.13  E-value=1.2e-05  Score=82.36  Aligned_cols=144  Identities=23%  Similarity=0.207  Sum_probs=85.4

Q ss_pred             ccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcc--cceeeeeeeec---ceeeEEeecCC
Q 003786          480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRN--LVRLLGCCIEL---EEKILIYEYMP  554 (795)
Q Consensus       480 ~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~---~~~~lv~E~~~  554 (795)
                      ++.|+.|..+.||++...+ +.+++|.....  .....+.+|..+++.+....  +.+++.+....   ...+++|++++
T Consensus         2 i~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~   78 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDD-GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIP   78 (239)
T ss_dssp             EEEEEESSSSEEEEEEETT-SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEES
T ss_pred             CccCCCCCeeeEEEEEECC-cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEec
Confidence            3679999999999999866 69999997544  45677889999998886433  45666543322   24578999999


Q ss_pred             CCChhh----------------hhh---cc-CCcccCChhh---------HHHH------------HHHHHH-HHHHHHh
Q 003786          555 NKSLDF----------------FLF---DS-TKENLLGWGT---------RVRI------------IEGIAQ-GLLYLHQ  592 (795)
Q Consensus       555 ~gsL~~----------------~l~---~~-~~~~~l~~~~---------~~~i------------~~~i~~-~l~~LH~  592 (795)
                      +..+..                .+.   .. ..........         ....            ...+.+ .+..++.
T Consensus        79 g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (239)
T PF01636_consen   79 GRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEA  158 (239)
T ss_dssp             SEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHh
Confidence            998877                110   11 0000000000         0000            111222 2333332


Q ss_pred             ----cCCCcEEeccCCCCcEEEC-CCCCeeeeccccccc
Q 003786          593 ----YSRLRVIHRDLKASNILLD-KDMNPKISDFGMARI  626 (795)
Q Consensus       593 ----~~~~~iiHrDikp~NIll~-~~~~vkL~DFGla~~  626 (795)
                          .....++|+|+.|.|||++ +++.+-|+||+.+..
T Consensus       159 ~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~  197 (239)
T PF01636_consen  159 LLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW  197 (239)
T ss_dssp             HHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred             hhccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence                1345699999999999999 666677999988753

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=98.04  E-value=5.1e-05  Score=78.74  Aligned_cols=141  Identities=16%  Similarity=0.117  Sum_probs=85.9

Q ss_pred             ccCcCCc-ccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcC-CcccceeeeeeeecceeeEEeecCCCCChh
Q 003786          482 KLGEGGF-GPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQ-HRNLVRLLGCCIELEEKILIYEYMPNKSLD  559 (795)
Q Consensus       482 ~LG~G~~-g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~E~~~~gsL~  559 (795)
                      .|-.|.. ..||+.... +..++||+.....   ...+.+|+++++.+. +--+.+++++....+..++|||+++|.++.
T Consensus         5 ~~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~   80 (244)
T cd05150           5 RVTEGQSGATVYRLDGK-NPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAA   80 (244)
T ss_pred             ecCCCCCcCeEEEEcCC-CCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHh
Confidence            4555655 788999764 4788888875432   446788999998885 334556777776666789999999998876


Q ss_pred             hhhh-------------------ccCCcc-cCChh--hHHHHHH--------------------HHHHHHHHHHh----c
Q 003786          560 FFLF-------------------DSTKEN-LLGWG--TRVRIIE--------------------GIAQGLLYLHQ----Y  593 (795)
Q Consensus       560 ~~l~-------------------~~~~~~-~l~~~--~~~~i~~--------------------~i~~~l~~LH~----~  593 (795)
                      ....                   ...... .+...  .......                    .+...+..|-.    .
T Consensus        81 ~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  160 (244)
T cd05150          81 ALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAE  160 (244)
T ss_pred             HhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCc
Confidence            4321                   000000 00000  0000000                    01111122211    1


Q ss_pred             CCCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          594 SRLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       594 ~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                      ....++|+|+.|.|||++.+..+.|+||+.+..
T Consensus       161 ~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~  193 (244)
T cd05150         161 EDLVVTHGDACLPNIIVDPGKFSGFIDLGRLGV  193 (244)
T ss_pred             CceEEECCCCCCccEEEeCCcEEEEEEcccccc
Confidence            124599999999999999987788999998754

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=98.00  E-value=5.4e-05  Score=76.12  Aligned_cols=155  Identities=18%  Similarity=0.223  Sum_probs=99.9

Q ss_pred             cccHHhHHHHccCCcccc---ccCcCCcccEEEeEecCcceEEEEEecccCccc-------------------hHH----
Q 003786          464 MFSLASVSAATANFSTEN---KLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQG-------------------QEE----  517 (795)
Q Consensus       464 ~~~~~~i~~~~~~~~~~~---~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-------------------~~~----  517 (795)
                      ......+.....+..+..   .|+.|.-+.||+|...++..+|||++.......                   .++    
T Consensus        34 ~~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~  113 (268)
T COG1718          34 KRTLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFA  113 (268)
T ss_pred             hHHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHH
Confidence            344455555554444433   566777888999988789999999986432111                   111    


Q ss_pred             -HHHHHHHHHhcC--CcccceeeeeeeecceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcC
Q 003786          518 -FKNEIKLIAKLQ--HRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS  594 (795)
Q Consensus       518 -~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~  594 (795)
                       ..+|+..|.++.  +-.+.+.+.+    .+..|||||+....+..   ..-+.-.+...++..+..++++.+.-|-...
T Consensus       114 W~~kEf~NL~R~~eAGVrvP~Pi~~----~~nVLvMEfIg~~g~pA---P~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a  186 (268)
T COG1718         114 WARKEFRNLKRAYEAGVRVPEPIAF----RNNVLVMEFIGDDGLPA---PRLKDVPLELEEAEGLYEDVVEYMRRLYKEA  186 (268)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCceee----cCCeEEEEeccCCCCCC---CCcccCCcCchhHHHHHHHHHHHHHHHHHhc
Confidence             135677777664  2333344433    34579999997652210   1111222333357777888888888777633


Q ss_pred             CCcEEeccCCCCcEEECCCCCeeeeccccccccC
Q 003786          595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       595 ~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                        ++||+||..=|||+. ++.+.|+||+-+....
T Consensus       187 --~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~  217 (268)
T COG1718         187 --GLVHGDLSEYNILVH-DGEPYIIDVSQAVTID  217 (268)
T ss_pred             --CcccccchhhheEEE-CCeEEEEECccccccC
Confidence              499999999999999 8899999999987654

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=98.00  E-value=2e-05  Score=77.98  Aligned_cols=105  Identities=22%  Similarity=0.197  Sum_probs=83.6

Q ss_pred             HHHHHHHHhcCC-cccceeeeeeeecceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCc
Q 003786          519 KNEIKLIAKLQH-RNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLR  597 (795)
Q Consensus       519 ~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~  597 (795)
                      .+|..+|+.+++ +++.+++|+|    ..++|.||...+++......-..-...+|..+.+|+.++++.+.+|++.-...
T Consensus         7 ~~E~lll~~l~~~~~~pk~lG~C----G~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~   82 (188)
T PF12260_consen    7 NNEPLLLQLLQGSEPFPKLLGSC----GRFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGF   82 (188)
T ss_pred             ccHHHHHHHcCCCCCCCCeeeEC----CCEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence            468889999986 6999999998    34789999988766421100011123689999999999999999999865556


Q ss_pred             EEeccCCCCcEEECCCCCeeeecccccccc
Q 003786          598 VIHRDLKASNILLDKDMNPKISDFGMARIF  627 (795)
Q Consensus       598 iiHrDikp~NIll~~~~~vkL~DFGla~~~  627 (795)
                      +...|++|+|+-++++|++|++|...+...
T Consensus        83 ~~lcDv~~~nfgv~~~~~lk~iDld~v~~~  112 (188)
T PF12260_consen   83 FYLCDVSPDNFGVNDDGRLKLIDLDDVFVE  112 (188)
T ss_pred             EEEeecchHHeEEeCCCcEEEEechhcchh
Confidence            888999999999999999999999887654

Proteins in this uncharacterised family are described as transmembrane proteins.

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=97.91  E-value=4.2e-05  Score=86.32  Aligned_cols=141  Identities=17%  Similarity=0.228  Sum_probs=89.0

Q ss_pred             cccCcCCcccEEEeEecCcceEEEEEecccCccc-------------------------------hH------HHHHHHH
Q 003786          481 NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQG-------------------------------QE------EFKNEIK  523 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-------------------------------~~------~~~~E~~  523 (795)
                      +.||.-+.|.||+|++++|+.||||+-++.-...                               .+      .|.+|.+
T Consensus       167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~  246 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAK  246 (538)
T ss_pred             chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHH
Confidence            6899999999999999999999999876532111                               00      1234444


Q ss_pred             HHHhc----CCcc---cceeeeeeee-cceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCC
Q 003786          524 LIAKL----QHRN---LVRLLGCCIE-LEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSR  595 (795)
Q Consensus       524 ~l~~l----~h~n---iv~l~~~~~~-~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~  595 (795)
                      ...+.    .|-+   -|++-.++.+ .....|+||||+|..+.+...-  ....++...+..-+.+...-+-+  ..| 
T Consensus       247 Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i--~~~gi~~~~i~~~l~~~~~~qIf--~~G-  321 (538)
T KOG1235|consen  247 NAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAI--DKRGISPHDILNKLVEAYLEQIF--KTG-  321 (538)
T ss_pred             hHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHH--HHcCCCHHHHHHHHHHHHHHHHH--hcC-
Confidence            33332    3444   2223333332 3578999999999988665421  12224444333333332221111  223 


Q ss_pred             CcEEeccCCCCcEEECC----CCCeeeeccccccccC
Q 003786          596 LRVIHRDLKASNILLDK----DMNPKISDFGMARIFG  628 (795)
Q Consensus       596 ~~iiHrDikp~NIll~~----~~~vkL~DFGla~~~~  628 (795)
                        ++|+|=.|.||+++.    ++.+.+.|||+...+.
T Consensus       322 --ffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is  356 (538)
T KOG1235|consen  322 --FFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVIS  356 (538)
T ss_pred             --CccCCCCCCcEEEecCCCCCccEEEEccccccccc
Confidence              999999999999984    6789999999988654

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=97.88  E-value=9.9e-05  Score=76.15  Aligned_cols=73  Identities=15%  Similarity=0.255  Sum_probs=47.5

Q ss_pred             cccCcCCccc-EEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCc---ccceeeeeeeecc---eeeEEeecC
Q 003786          481 NKLGEGGFGP-VYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHR---NLVRLLGCCIELE---EKILIYEYM  553 (795)
Q Consensus       481 ~~LG~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~---~~~lv~E~~  553 (795)
                      +.|+.|+... ||+.    +..+++|..+..  .....+.+|.++|..+...   -+.+.++.....+   ..+++||++
T Consensus         3 ~~~~~gG~~n~vy~~----~~~~VlR~~~~~--~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i   76 (235)
T cd05155           3 EPVDSGGTDNATFRL----GDDMSVRLPSAA--GYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWL   76 (235)
T ss_pred             eeccCCCcccceEEc----CCceEEEcCCcc--chHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEee
Confidence            5688777774 9975    346788875432  2355789999999988632   2333444333222   347899999


Q ss_pred             CCCChh
Q 003786          554 PNKSLD  559 (795)
Q Consensus       554 ~~gsL~  559 (795)
                      +|.++.
T Consensus        77 ~G~~l~   82 (235)
T cd05155          77 EGETAT   82 (235)
T ss_pred             cCCCCC
Confidence            997764

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PLN02876 acyl-CoA dehydrogenase

Probab=97.87  E-value=0.00014  Score=88.66  Aligned_cols=79  Identities=16%  Similarity=0.366  Sum_probs=58.5

Q ss_pred             ccccCcCCcccEEEeEecCc---ceEEEEEecccC-ccchHHHHHHHHHHHhcC-Cccc--ceeeeeeeec---ceeeEE
Q 003786          480 ENKLGEGGFGPVYKGRLLNG---QEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQ-HRNL--VRLLGCCIEL---EEKILI  549 (795)
Q Consensus       480 ~~~LG~G~~g~Vy~~~~~~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~ni--v~l~~~~~~~---~~~~lv  549 (795)
                      .++|+.|.+..+|+.+...+   ..+++|+..... ......+.+|+++|+.+. |.++  .+++.++.+.   ...++|
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV  122 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI  122 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence            47789999999999876553   468888764432 223457889999999996 6664  6777777654   357899


Q ss_pred             eecCCCCCh
Q 003786          550 YEYMPNKSL  558 (795)
Q Consensus       550 ~E~~~~gsL  558 (795)
                      |||++|..+
T Consensus       123 ME~v~G~~~  131 (822)
T PLN02876        123 MEYLEGRIF  131 (822)
T ss_pred             EEecCCccc
Confidence            999998754

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=97.85  E-value=9.2e-05  Score=70.46  Aligned_cols=129  Identities=21%  Similarity=0.296  Sum_probs=90.1

Q ss_pred             ccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccce-eeeeeeecceeeEEeecCCCC
Q 003786          478 STENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR-LLGCCIELEEKILIYEYMPNK  556 (795)
Q Consensus       478 ~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~-l~~~~~~~~~~~lv~E~~~~g  556 (795)
                      ...+.|++|.+|.||++.. .|.++|+|+-+..  .....+..|+++|..++-.++.+ +|.|    +..++.|||+.|-
T Consensus        25 ~v~~~L~KG~~s~Vyl~~~-~~~~~a~Kvrr~d--s~r~~l~kEakiLeil~g~~~~p~vy~y----g~~~i~me~i~G~   97 (201)
T COG2112          25 RVEKELAKGTTSVVYLGEW-RGGEVALKVRRRD--SPRRNLEKEAKILEILAGEGVTPEVYFY----GEDFIRMEYIDGR   97 (201)
T ss_pred             hhhhhhhcccccEEEEeec-cCceEEEEEecCC--cchhhHHHHHHHHHHhhhcCCCceEEEe----chhhhhhhhhcCc
Confidence            4567899999999999987 4568899976543  45678999999999998776664 4433    2234559999998


Q ss_pred             ChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCC-CCcEEECCCCCeeeeccccccc
Q 003786          557 SLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLK-ASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       557 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDik-p~NIll~~~~~vkL~DFGla~~  626 (795)
                      .|...-...         + .+.+..++..-.-|...|   |-|+.|. |..++|-.+..+.|+||.-|..
T Consensus        98 ~L~~~~~~~---------~-rk~l~~vlE~a~~LD~~G---I~H~El~~~~k~vlv~~~~~~iIDFd~At~  155 (201)
T COG2112          98 PLGKLEIGG---------D-RKHLLRVLEKAYKLDRLG---IEHGELSRPWKNVLVNDRDVYIIDFDSATF  155 (201)
T ss_pred             chhhhhhcc---------c-HHHHHHHHHHHHHHHHhc---cchhhhcCCceeEEecCCcEEEEEccchhh
Confidence            886543110         1 223344555555566666   9999987 4555555555999999999874

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=97.83  E-value=0.00014  Score=72.39  Aligned_cols=128  Identities=17%  Similarity=0.242  Sum_probs=91.3

Q ss_pred             ccccCcCCcccEEEeEecCcceEEEEEecccC----------------ccchHHHHHHHHHHHhcC------Ccccceee
Q 003786          480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQS----------------GQGQEEFKNEIKLIAKLQ------HRNLVRLL  537 (795)
Q Consensus       480 ~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~----------------~~~~~~~~~E~~~l~~l~------h~niv~l~  537 (795)
                      ...||+|+.-.||.  +++.....||+.....                .....+..+|+.....+.      +.+|.+++
T Consensus         6 ~~~i~~G~~R~cy~--HP~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~   83 (199)
T PF10707_consen    6 SDLIAQGGERDCYQ--HPDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY   83 (199)
T ss_pred             CcccccCCCceEEE--CCCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence            45799999999996  6677888999987654                223456677777666665      78999999


Q ss_pred             eeeeecceeeEEeecCCC--C----ChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEEC
Q 003786          538 GCCIELEEKILIYEYMPN--K----SLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLD  611 (795)
Q Consensus       538 ~~~~~~~~~~lv~E~~~~--g----sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~  611 (795)
                      |+....-...+|+|.+.+  |    +|.+++.    .+.++. ...+.   +-+-..||-+.+   |+.+||+|.||++.
T Consensus        84 G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~----~~~~~~-~~~~~---L~~f~~~l~~~~---Iv~~dl~~~NIv~~  152 (199)
T PF10707_consen   84 GFVETNLGLGLVVELIRDADGNISPTLEDYLK----EGGLTE-ELRQA---LDEFKRYLLDHH---IVIRDLNPHNIVVQ  152 (199)
T ss_pred             EEEecCCceEEEEEEEECCCCCcCccHHHHHH----cCCccH-HHHHH---HHHHHHHHHHcC---CeecCCCcccEEEE
Confidence            999999999999997643  2    4666662    233444 33333   334455666665   99999999999995


Q ss_pred             CC--C--Ceeeec
Q 003786          612 KD--M--NPKISD  620 (795)
Q Consensus       612 ~~--~--~vkL~D  620 (795)
                      ..  +  .+.|+|
T Consensus       153 ~~~~~~~~lvlID  165 (199)
T PF10707_consen  153 RRDSGEFRLVLID  165 (199)
T ss_pred             ecCCCceEEEEEe
Confidence            33  2  477777

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>TIGR02721 ycfN_thiK thiamine kinase

Probab=97.75  E-value=0.00016  Score=75.55  Aligned_cols=139  Identities=14%  Similarity=0.112  Sum_probs=81.1

Q ss_pred             ccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccc-eeeeeeeecceeeEEeecCCCCChhh
Q 003786          482 KLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV-RLLGCCIELEEKILIYEYMPNKSLDF  560 (795)
Q Consensus       482 ~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~~~~~~~~~~~lv~E~~~~gsL~~  560 (795)
                      .+..|-...+|+.. .+++.+++|+.........-...+|.++++.+....++ +++...    ..++|+||++|..+..
T Consensus         3 ~~~~G~tn~~y~~~-~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~----~~~~v~e~i~G~~~~~   77 (256)
T TIGR02721         3 TLSGGLTNRSWRIE-HPGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVN----EHWLLVEWLEGEVITL   77 (256)
T ss_pred             cCCCcCcCCeEEEE-eCCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEe----CCEEEEEeccCccccc
Confidence            46678888999987 35778899976543222212357899999998754443 344332    2368999999877642


Q ss_pred             h-----------------hhccCC-cccCChh-hHHHHHHH---------HHHHHHHHHhc-----CCCcEEeccCCCCc
Q 003786          561 F-----------------LFDSTK-ENLLGWG-TRVRIIEG---------IAQGLLYLHQY-----SRLRVIHRDLKASN  607 (795)
Q Consensus       561 ~-----------------l~~~~~-~~~l~~~-~~~~i~~~---------i~~~l~~LH~~-----~~~~iiHrDikp~N  607 (795)
                      .                 ++.... ...++.. ....+..+         +.+.+..+...     ....++|+|+.|.|
T Consensus        78 ~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~N  157 (256)
T TIGR02721        78 DQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYN  157 (256)
T ss_pred             ccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCc
Confidence            1                 011110 0111111 11111111         11112222111     12358999999999


Q ss_pred             EEECCCCCeeeeccccccc
Q 003786          608 ILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       608 Ill~~~~~vkL~DFGla~~  626 (795)
                      |+++.++ +.|+||+.+..
T Consensus       158 il~~~~~-~~lIDwE~a~~  175 (256)
T TIGR02721       158 LVVTPQG-LKLIDWEYASD  175 (256)
T ss_pred             EEEeCCC-CEEEeccccCc
Confidence            9999877 78999999864

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=97.75  E-value=0.00021  Score=73.61  Aligned_cols=75  Identities=19%  Similarity=0.283  Sum_probs=50.7

Q ss_pred             ccccCcCCcccEEEeEecC--cceEEEEEecccCccchHHHHHHHHHHHhcCCcccc-eeeeeeeecceeeEEeecCCCC
Q 003786          480 ENKLGEGGFGPVYKGRLLN--GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV-RLLGCCIELEEKILIYEYMPNK  556 (795)
Q Consensus       480 ~~~LG~G~~g~Vy~~~~~~--~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~~~~~~~~~~~lv~E~~~~g  556 (795)
                      ++.|..|-...+|+....+  ++.|++|+....... .....+|+.+++.+...+++ ++++.+.    ..++|||++|.
T Consensus         3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~-~~d~~~E~~~~~~l~~~gl~P~v~~~~~----~~~l~e~i~G~   77 (235)
T cd05157           3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL-IIDRERELRIHKLLSKHGLAPKLYATFQ----NGLIYEFIPGR   77 (235)
T ss_pred             EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccc-eecHHHHHHHHHHHHhCCCCCeEEEEeC----CcEEEEeeCCC
Confidence            3578888899999998664  678999977543221 22345789999988654444 4444322    24899999997


Q ss_pred             Chh
Q 003786          557 SLD  559 (795)
Q Consensus       557 sL~  559 (795)
                      ++.
T Consensus        78 ~l~   80 (235)
T cd05157          78 TLE   80 (235)
T ss_pred             cCC
Confidence            763

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PRK10593 hypothetical protein; Provisional

Probab=97.65  E-value=0.00055  Score=73.17  Aligned_cols=80  Identities=13%  Similarity=0.085  Sum_probs=58.6

Q ss_pred             CCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCC---cccceeeeeeee---cceeeEE
Q 003786          476 NFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQH---RNLVRLLGCCIE---LEEKILI  549 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~l~~~~~~---~~~~~lv  549 (795)
                      .....+.||+|..+.||.....++ .+++|..+.  ......+.+|.+.|+.|..   ..+.++++.+..   .+..++|
T Consensus        15 ~~~~~~~i~~G~~~~vy~~~~~~~-~~~~k~~~~--~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LV   91 (297)
T PRK10593         15 KLSRVECISEQPYAALWALYDSQG-NPMPLMARS--FSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLL   91 (297)
T ss_pred             hhheeeecCCccceeEEEEEcCCC-CEEEEEecc--cccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEE
Confidence            334457899999999999876555 567777432  1234688999999999853   357778877654   3568999


Q ss_pred             eecCCCCCh
Q 003786          550 YEYMPNKSL  558 (795)
Q Consensus       550 ~E~~~~gsL  558 (795)
                      ||++++.++
T Consensus        92 mE~i~G~~~  100 (297)
T PRK10593         92 LERLRGVSV  100 (297)
T ss_pred             EeccCCEec
Confidence            999998765

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=97.63  E-value=0.00062  Score=74.99  Aligned_cols=75  Identities=13%  Similarity=0.185  Sum_probs=55.2

Q ss_pred             cccCcCCcccEEEeEecCc-ceEEEEEeccc-------CccchHHHHHHHHHHHhcC---CcccceeeeeeeecceeeEE
Q 003786          481 NKLGEGGFGPVYKGRLLNG-QEVAVKRLSSQ-------SGQGQEEFKNEIKLIAKLQ---HRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~~~-~~vavK~~~~~-------~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv  549 (795)
                      +.||.|.+..||++...+| +.++||.-...       -....++...|.+.|+.+.   -.++.+++.+  +.+..++|
T Consensus        32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~lV  109 (401)
T PRK09550         32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVTV  109 (401)
T ss_pred             eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEEE
Confidence            6799999999999998776 58999975321       1235577888999988863   2345666666  44668899


Q ss_pred             eecCCCCC
Q 003786          550 YEYMPNKS  557 (795)
Q Consensus       550 ~E~~~~gs  557 (795)
                      ||++++..
T Consensus       110 ME~L~~~~  117 (401)
T PRK09550        110 MEDLSDHK  117 (401)
T ss_pred             EecCCCcc
Confidence            99998743

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=97.61  E-value=0.00047  Score=67.97  Aligned_cols=125  Identities=23%  Similarity=0.407  Sum_probs=89.0

Q ss_pred             cCCccccccCcCCc-ccEEEeEecCcceEEEEEecc---cCc------------------cchHHHHHHHHHHHhcC---
Q 003786          475 ANFSTENKLGEGGF-GPVYKGRLLNGQEVAVKRLSS---QSG------------------QGQEEFKNEIKLIAKLQ---  529 (795)
Q Consensus       475 ~~~~~~~~LG~G~~-g~Vy~~~~~~~~~vavK~~~~---~~~------------------~~~~~~~~E~~~l~~l~---  529 (795)
                      .+++..+.||.|.- |.||++++ +|+.+|+|++..   ...                  .-..-|..|.+...+|+   
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I-~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~  115 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEI-DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAG  115 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEE-CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhcc
Confidence            78899999999999 99999998 678999999321   100                  01124678888887775   


Q ss_pred             Cccc--ceeeeeeeecc------------------eeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHH
Q 003786          530 HRNL--VRLLGCCIELE------------------EKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLY  589 (795)
Q Consensus       530 h~ni--v~l~~~~~~~~------------------~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~  589 (795)
                      +.++  |+.+|+..-..                  ...+|.||++...                .....-+.+|.+-|..
T Consensus       116 ~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~----------------~~~~~~~~~~~~dl~~  179 (207)
T PF13095_consen  116 REGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP----------------PLQIRDIPQMLRDLKI  179 (207)
T ss_pred             ccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc----------------ccchhHHHHHHHHHHH
Confidence            4456  89999874221                  1246667665432                1233456677788888


Q ss_pred             HHhcCCCcEEeccCCCCcEEECCCCCeeeeccccc
Q 003786          590 LHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMA  624 (795)
Q Consensus       590 LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla  624 (795)
                      +|..+   |+-+|+++.|..     .=||+|||.+
T Consensus       180 ~~k~g---I~~~Dv~~~ny~-----~G~lvDfs~~  206 (207)
T PF13095_consen  180 LHKLG---IVPRDVKPRNYR-----GGKLVDFSSS  206 (207)
T ss_pred             HHHCC---eeeccCcccccc-----CCEEEecccC
Confidence            99988   999999999975     3488999864

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=97.49  E-value=0.00063  Score=72.80  Aligned_cols=143  Identities=18%  Similarity=0.156  Sum_probs=87.6

Q ss_pred             ccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcc--cceeeee------eeecceeeEEee
Q 003786          480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRN--LVRLLGC------CIELEEKILIYE  551 (795)
Q Consensus       480 ~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~------~~~~~~~~lv~E  551 (795)
                      .+.|..|....+|+.... +..+++|+...   ...+.+..|++++..+.+.+  +.+++..      ....+..++|+|
T Consensus        19 i~~i~~G~~n~~y~v~~~-~~~~vLr~~~~---~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~   94 (296)
T cd05153          19 FEGISAGIENTNYFVTTD-SGRYVLTLFEK---VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVE   94 (296)
T ss_pred             eecccCccccceEEEEeC-CCcEEEEEcCC---CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEE
Confidence            567888888999998753 45789998754   34566788898888885433  4444432      123345689999


Q ss_pred             cCCCCChhh----hh----------hccCCc--------ccCChhhH----------HHHHHHHHHHHHHHHhc----CC
Q 003786          552 YMPNKSLDF----FL----------FDSTKE--------NLLGWGTR----------VRIIEGIAQGLLYLHQY----SR  595 (795)
Q Consensus       552 ~~~~gsL~~----~l----------~~~~~~--------~~l~~~~~----------~~i~~~i~~~l~~LH~~----~~  595 (795)
                      +++|..+..    ..          +.....        ....|...          ......+..++.++...    -.
T Consensus        95 ~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~  174 (296)
T cd05153          95 FLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLP  174 (296)
T ss_pred             eCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCC
Confidence            999877532    00          100000        00111110          01112233445555431    12


Q ss_pred             CcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          596 LRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       596 ~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                      ..++|+|+.|.||+++.++.+.|+||+.+..
T Consensus       175 ~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~  205 (296)
T cd05153         175 RGVIHADLFRDNVLFDGDELSGVIDFYFACT  205 (296)
T ss_pred             CcCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence            3599999999999999987778999998763

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=97.39  E-value=0.00089  Score=71.89  Aligned_cols=141  Identities=26%  Similarity=0.286  Sum_probs=85.5

Q ss_pred             cccCcCCcccEEEeEecC-------cceEEEEEecccCccchHHHHHHHHHHHhcCCcccc-eeeeeeeecceeeEEeec
Q 003786          481 NKLGEGGFGPVYKGRLLN-------GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV-RLLGCCIELEEKILIYEY  552 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~~~~~~~~~~~lv~E~  552 (795)
                      +.|..|-...+|+.+..+       ++.+++|+..... .......+|++++..+...++. ++++++.    -.+|+||
T Consensus         4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~----~~~v~e~   78 (302)
T cd05156           4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV-ELLIDRERELVVFARLSERNLGPKLYGIFP----NGRIEEF   78 (302)
T ss_pred             EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC-cceechHHHHHHHHHHHhCCCCCceEEEeC----CCchhhe
Confidence            567777778999987654       5789999975543 2334567899999888644444 4555443    2468999


Q ss_pred             CCCCChhhhh-----------------hccCCcc------cCC--hhhHH--------------------------HHHH
Q 003786          553 MPNKSLDFFL-----------------FDSTKEN------LLG--WGTRV--------------------------RIIE  581 (795)
Q Consensus       553 ~~~gsL~~~l-----------------~~~~~~~------~l~--~~~~~--------------------------~i~~  581 (795)
                      ++|..+....                 +......      ..+  +....                          .+..
T Consensus        79 i~G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (302)
T cd05156          79 IPSRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSEKLLEVELSLFLE  158 (302)
T ss_pred             eCCCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchhhhhhhhHHHHHH
Confidence            9987764311                 1111100      000  00000                          0112


Q ss_pred             HHHHHHHHHHh------cCCCcEEeccCCCCcEEECCC----CCeeeeccccccc
Q 003786          582 GIAQGLLYLHQ------YSRLRVIHRDLKASNILLDKD----MNPKISDFGMARI  626 (795)
Q Consensus       582 ~i~~~l~~LH~------~~~~~iiHrDikp~NIll~~~----~~vkL~DFGla~~  626 (795)
                      .+.+.+..|..      .....++|+|+.|.|||++.+    +.+.|+||..+..
T Consensus       159 ~~~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~  213 (302)
T cd05156         159 DEAKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASY  213 (302)
T ss_pred             HHHHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCC
Confidence            22233334432      134569999999999999985    8899999999863

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=97.31  E-value=0.00053  Score=81.94  Aligned_cols=196  Identities=20%  Similarity=0.216  Sum_probs=134.8

Q ss_pred             HHHHHHHHHhcCCcccceeeeeeeecceee----EEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhc
Q 003786          518 FKNEIKLIAKLQHRNLVRLLGCCIELEEKI----LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY  593 (795)
Q Consensus       518 ~~~E~~~l~~l~h~niv~l~~~~~~~~~~~----lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~  593 (795)
                      ..-|...+.++.|+|++.++.|..+.....    +..|++...++...+.   .-..++.+....+..++..|+.|+|..
T Consensus       229 ~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q---~v~~i~~~~~r~~~~~~~~GL~~~h~~  305 (1351)
T KOG1035|consen  229 TEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQ---SVGSIPLETLRILHQKLLEGLAYLHSL  305 (1351)
T ss_pred             HHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHh---hccccCHHHHHHHHHHHhhhHHHHHHh
Confidence            345777888999999999999877655443    3347888888877773   344577888889999999999999987


Q ss_pred             CCCcEEeccCCCC---cEEECCCCCeeee--ccccccccCCCcccccccccccccccccccccccCCCCcc--cchhhHH
Q 003786          594 SRLRVIHRDLKAS---NILLDKDMNPKIS--DFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK--SDVFSFG  666 (795)
Q Consensus       594 ~~~~iiHrDikp~---NIll~~~~~vkL~--DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k--~DvwSlG  666 (795)
                      .   ..|.=+..+   +--.+.++.+.++  ||+....+......   ....-+..+.|||......++.+  .|+|.+|
T Consensus       306 ~---l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~---~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lg  379 (1351)
T KOG1035|consen  306 S---LEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKS---FSDLLAEIRNADEDLKENTAKKSRLTDLWCLG  379 (1351)
T ss_pred             c---cceeEEecccccccccCccceeecchhhhcccccCCCcccc---hhhcCccccccccccccccchhhhhhHHHHHH
Confidence            5   444444333   4444566777777  88888766443321   11234556788888877665544  7999999


Q ss_pred             HHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          667 VLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       667 vil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ..+..+..|..+........                 .+++..        ....+.....+|+..++++|+++.+++.+
T Consensus       380 ll~~~~~~~~~i~~~~~~~~-----------------~~l~~~--------~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~  434 (1351)
T KOG1035|consen  380 LLLLQLSQGEDISEKSAVPV-----------------SLLDVL--------STSELLDALPKCLDEDSEERLSALELLTH  434 (1351)
T ss_pred             HHHhhhhhcCcccccccchh-----------------hhhccc--------cchhhhhhhhhhcchhhhhccchhhhhhc
Confidence            99999998876543211100                 111110        01134566778999999999999999997


Q ss_pred             H
Q 003786          747 L  747 (795)
Q Consensus       747 L  747 (795)
                      .
T Consensus       435 ~  435 (1351)
T KOG1035|consen  435 P  435 (1351)
T ss_pred             h
Confidence            5

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=97.18  E-value=0.00062  Score=70.75  Aligned_cols=138  Identities=14%  Similarity=0.146  Sum_probs=95.4

Q ss_pred             ccCCccccccCcCCcccEEEeEecCcceEEEEEecccC-----------------ccc-----hHHHHHHHHHHHhcCC-
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQS-----------------GQG-----QEEFKNEIKLIAKLQH-  530 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~-----------------~~~-----~~~~~~E~~~l~~l~h-  530 (795)
                      ..=+.++++||-|.-+.||.+-..+|++.++|.-+...                 ...     .-...+|+..|+.|.. 
T Consensus        91 ~~v~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~  170 (465)
T KOG2268|consen   91 GSVESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYER  170 (465)
T ss_pred             chhhhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHc
Confidence            33478899999999999999999899999999542110                 000     1123578888888853 


Q ss_pred             cc-cceeeeeeeecceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEE
Q 003786          531 RN-LVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNIL  609 (795)
Q Consensus       531 ~n-iv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIl  609 (795)
                      -. +.+.+++    +..++|||++.+-.|...-      .   ......+...+..-+--|-.+|   +||+|..-=||+
T Consensus       171 gfpVPkpiD~----~RH~Vvmelv~g~Pl~~v~------~---v~d~~~ly~~lm~~Iv~la~~G---lIHgDFNEFNim  234 (465)
T KOG2268|consen  171 GFPVPKPIDH----NRHCVVMELVDGYPLRQVR------H---VEDPPTLYDDLMGLIVRLANHG---LIHGDFNEFNIM  234 (465)
T ss_pred             CCCCCCcccc----cceeeHHHhhcccceeeee------e---cCChHHHHHHHHHHHHHHHHcC---ceecccchheeE
Confidence            32 3344443    4567899999887774332      1   1223334444455556666777   999999999999


Q ss_pred             ECCCCCeeeecccccccc
Q 003786          610 LDKDMNPKISDFGMARIF  627 (795)
Q Consensus       610 l~~~~~vkL~DFGla~~~  627 (795)
                      +++++.++++||--....
T Consensus       235 v~dd~~i~vIDFPQmvS~  252 (465)
T KOG2268|consen  235 VKDDDKIVVIDFPQMVST  252 (465)
T ss_pred             EecCCCEEEeechHhhcc
Confidence            999999999999765443

>PF11883 DUF3403: Domain of unknown function (DUF3403); InterPro: IPR021820 This functionally uncharacterised domain of around 50 amino acids is found in the C terminus of eukaryotic S-locus receptor kinase proteins

Probab=97.12  E-value=0.00049  Score=50.85  Aligned_cols=45  Identities=33%  Similarity=0.519  Sum_probs=36.8

Q ss_pred             cCCCCCCCCCCcccccccccccCCCCCC-CccccccceeeccccCC
Q 003786          751 TINLPHPRQPAFSSIRGLKNTILPANGK-ARVCSGNCLTLSEMDAR  795 (795)
Q Consensus       751 ~~~l~~p~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  795 (795)
                      ...||.|++|+|...|.....-.....+ ...++.|.||+|+|+||
T Consensus         3 ~~~LP~PKqPgF~~~r~~~e~~sSss~~~~~~~SvNevTiT~l~~R   48 (48)
T PF11883_consen    3 TATLPQPKQPGFFTGRSPSETDSSSSKQRDESCSVNEVTITMLEAR   48 (48)
T ss_pred             cccCCCCCCCCEEeEcCCCCcCCCcccccCCCCCeeeEEEEeEecC
Confidence            4579999999999999987665443333 38899999999999999

; GO: 0004674 protein serine/threonine kinase activity

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=97.10  E-value=0.0062  Score=65.53  Aligned_cols=144  Identities=20%  Similarity=0.173  Sum_probs=84.5

Q ss_pred             ccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcc--cceeeeee------eecceeeEEee
Q 003786          480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRN--LVRLLGCC------IELEEKILIYE  551 (795)
Q Consensus       480 ~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~------~~~~~~~lv~E  551 (795)
                      .+.++.|....+|+.+.. +..+++|+....  ...+++..|.+++..|....  +.+++...      ...+..++++|
T Consensus        27 i~~~~~G~~n~~y~v~t~-~~~~vLK~~~~~--~~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e  103 (307)
T TIGR00938        27 LKGIAEGVENSNYLLTTD-VGRYILTLYEKR--VKAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLVE  103 (307)
T ss_pred             ccccCCccccceEEEEeC-CCcEEEEEecCC--CCHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEEE
Confidence            567788888899998754 446888987542  22456677888888775322  33443321      12345689999


Q ss_pred             cCCCCChhhh-----------h---hccCCc------c---cCChhhHH------------HHHHHHHHHHHHHHh----
Q 003786          552 YMPNKSLDFF-----------L---FDSTKE------N---LLGWGTRV------------RIIEGIAQGLLYLHQ----  592 (795)
Q Consensus       552 ~~~~gsL~~~-----------l---~~~~~~------~---~l~~~~~~------------~i~~~i~~~l~~LH~----  592 (795)
                      |++|..+...           +   +.....      .   .-.|....            .....+.+.+.++..    
T Consensus       104 ~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~~  183 (307)
T TIGR00938       104 FLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWPR  183 (307)
T ss_pred             eCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhhh
Confidence            9998654211           0   110000      0   00111000            011123344555532    


Q ss_pred             cCCCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       593 ~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                      .-...++|+|+.+.||+++.++.+.|+||+.+..
T Consensus       184 ~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~  217 (307)
T TIGR00938       184 DLPRGVIHADLFPDNVLFDGDSVKGVIDFYFACT  217 (307)
T ss_pred             cCCCccCCCCCCcCcEEEECCceEEEeecccccC
Confidence            1234699999999999999888778999999753

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>PLN02236 choline kinase

Probab=97.03  E-value=0.004  Score=68.00  Aligned_cols=142  Identities=18%  Similarity=0.202  Sum_probs=83.8

Q ss_pred             ccccCcCCcccEEEeEecC-----cceEEEEEecccCccchHHHHHHHHHHHhcCCcccc-eeeeeeeecceeeEEeecC
Q 003786          480 ENKLGEGGFGPVYKGRLLN-----GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV-RLLGCCIELEEKILIYEYM  553 (795)
Q Consensus       480 ~~~LG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~~~~~~~~~~~lv~E~~  553 (795)
                      +++|-.|-.-.+|++...+     ++.|++|+.......... -.+|..+++.+...++. ++++.+..+    .|.||+
T Consensus        41 i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~id-R~~E~~~~~~l~~~gl~P~~~~~~~~g----~v~efi  115 (344)
T PLN02236         41 VIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFD-RDDEIRTFECMSRHGQGPRLLGRFPNG----RVEEFI  115 (344)
T ss_pred             EEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeec-hHHHHHHHHHHHHcCCCCceEEEECCc----eEEEee
Confidence            3567678888999987532     367899988655433333 37799999988755554 455555332    589999


Q ss_pred             CCCChhhhh-----------------hccC-C-cc-cCChhhHHHHHHH-----------------HHHHHHHH----Hh
Q 003786          554 PNKSLDFFL-----------------FDST-K-EN-LLGWGTRVRIIEG-----------------IAQGLLYL----HQ  592 (795)
Q Consensus       554 ~~gsL~~~l-----------------~~~~-~-~~-~l~~~~~~~i~~~-----------------i~~~l~~L----H~  592 (795)
                      ++.++...-                 +... . .. ...+.++..+..+                 +...+..|    ..
T Consensus       116 ~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~  195 (344)
T PLN02236        116 HARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSG  195 (344)
T ss_pred             CCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcc
Confidence            887764210                 1100 0 00 1111222222211                 11112222    21


Q ss_pred             -cCCCcEEeccCCCCcEEECC-CCCeeeeccccccc
Q 003786          593 -YSRLRVIHRDLKASNILLDK-DMNPKISDFGMARI  626 (795)
Q Consensus       593 -~~~~~iiHrDikp~NIll~~-~~~vkL~DFGla~~  626 (795)
                       .....++|+|+++.|||+++ ++.+.|+||..+..
T Consensus       196 ~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~  231 (344)
T PLN02236        196 DDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASY  231 (344)
T ss_pred             cCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence             22346999999999999986 47899999998864

>PRK05231 homoserine kinase; Provisional

Probab=97.00  E-value=0.0079  Score=65.09  Aligned_cols=143  Identities=20%  Similarity=0.210  Sum_probs=79.2

Q ss_pred             ccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcc--cceeee------eeeecceeeEEee
Q 003786          480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRN--LVRLLG------CCIELEEKILIYE  551 (795)
Q Consensus       480 ~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~------~~~~~~~~~lv~E  551 (795)
                      .+.|+.|....+|+.+..+| .+++|++..   ...+.+..|..++..|...+  +.+.+.      +....+..++++|
T Consensus        27 ~~~l~~G~~n~~y~v~t~~g-~~vLK~~~~---~~~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~~  102 (319)
T PRK05231         27 LKGIAEGIENSNFFLTTTQG-EYVLTLFER---LTAEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIVT  102 (319)
T ss_pred             cchhccccccceEEEEeCCC-cEEEEEecc---CChHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEEE
Confidence            45677788889999876544 789998752   23345556667776664222  233332      1123455789999


Q ss_pred             cCCCCChhh-----------hh---hccCCc------c--cCCh-hhHHH------------HHHH-HHHHHHHHHhc--
Q 003786          552 YMPNKSLDF-----------FL---FDSTKE------N--LLGW-GTRVR------------IIEG-IAQGLLYLHQY--  593 (795)
Q Consensus       552 ~~~~gsL~~-----------~l---~~~~~~------~--~l~~-~~~~~------------i~~~-i~~~l~~LH~~--  593 (795)
                      |++|..+..           .+   +.....      .  .+.+ .....            .+.+ +...+..+...  
T Consensus       103 ~l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  182 (319)
T PRK05231        103 FLEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQAALLEAELAAQLAFLASAAW  182 (319)
T ss_pred             ecCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHHHHHHHHHHHHHHhhhcccc
Confidence            999975421           11   110000      0  0111 11110            1111 11122333211  


Q ss_pred             --CCCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          594 --SRLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       594 --~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                        -...+||+|+.|.||+++.+...-|+||+.+..
T Consensus       183 ~~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~  217 (319)
T PRK05231        183 PALPRGVIHADLFRDNVLFEGDRLSGFIDFYFACN  217 (319)
T ss_pred             ccCCcccCCCCCCCCcEEEECCceEEEEecccccC
Confidence              133599999999999998665568999998753

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=96.95  E-value=0.0078  Score=63.57  Aligned_cols=31  Identities=29%  Similarity=0.562  Sum_probs=26.2

Q ss_pred             CcEEeccCCCCcEEECCCCC-eeeeccccccc
Q 003786          596 LRVIHRDLKASNILLDKDMN-PKISDFGMARI  626 (795)
Q Consensus       596 ~~iiHrDikp~NIll~~~~~-vkL~DFGla~~  626 (795)
                      ..++|+|++|.|||++.++. .-|+||+.+..
T Consensus       185 ~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i  216 (276)
T cd05152         185 TVLVHGDLHPGHILIDEDARVTGLIDWTEAKV  216 (276)
T ss_pred             CeeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence            35899999999999997565 46999999875

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=96.87  E-value=0.0053  Score=65.10  Aligned_cols=142  Identities=18%  Similarity=0.212  Sum_probs=97.3

Q ss_pred             ccccccCcCCcccEEEeEecCcceEEEEEecccCc---------------------cchHH-----HHHHHHHHHhcCCc
Q 003786          478 STENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSG---------------------QGQEE-----FKNEIKLIAKLQHR  531 (795)
Q Consensus       478 ~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~---------------------~~~~~-----~~~E~~~l~~l~h~  531 (795)
                      .+...|..|.-+.||.+...+|..+|||+++-...                     ...+.     ...|++.|.+|+..
T Consensus       147 ~inGCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~a  226 (520)
T KOG2270|consen  147 EINGCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNA  226 (520)
T ss_pred             ecccccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence            44567888999999999998999999998743210                     00111     13577777777654


Q ss_pred             ccceeeeeeeecceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEEC
Q 003786          532 NLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLD  611 (795)
Q Consensus       532 niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~  611 (795)
                      .|.- -.-. .-....|||+|+......   ....+...++...+..+-.++++-+.-|-+.+  ++||.||.-=|+|+ 
T Consensus       227 GIP~-PePI-lLk~hVLVM~FlGrdgw~---aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c--~LVHADLSEfN~Ly-  298 (520)
T KOG2270|consen  227 GIPC-PEPI-LLKNHVLVMEFLGRDGWA---APKLKDASLSTSKARELYQQCVRIMRRLYQKC--RLVHADLSEFNLLY-  298 (520)
T ss_pred             CCCC-CCce-eeecceEeeeeccCCCCc---CcccccccCChHHHHHHHHHHHHHHHHHHHHh--ceeccchhhhhheE-
Confidence            4221 1110 112347999998643331   22234445777788888999999999998887  69999999999999 


Q ss_pred             CCCCeeeecccccccc
Q 003786          612 KDMNPKISDFGMARIF  627 (795)
Q Consensus       612 ~~~~vkL~DFGla~~~  627 (795)
                      .+|.+.|+|-+-+...
T Consensus       299 hdG~lyiIDVSQSVE~  314 (520)
T KOG2270|consen  299 HDGKLYIIDVSQSVEH  314 (520)
T ss_pred             ECCEEEEEEccccccC
Confidence            5678999998776543

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=96.76  E-value=0.014  Score=62.18  Aligned_cols=147  Identities=16%  Similarity=0.225  Sum_probs=83.9

Q ss_pred             cccccCcCCcccEEEeEecCcceEEEEEecc--cCccchHHHHHHHHHHHhcCC--cccceeeeeeeecc--eeeEEeec
Q 003786          479 TENKLGEGGFGPVYKGRLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQH--RNLVRLLGCCIELE--EKILIYEY  552 (795)
Q Consensus       479 ~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~--~~~lv~E~  552 (795)
                      +.+.+..|-.-.+|..... ++++++. ...  .........++|+++|+.+.-  .-+.+.++.|.++.  ..+.||+|
T Consensus        29 ~v~~~~~G~sn~t~~~~~~-~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~  106 (321)
T COG3173          29 IVEEISGGWSNDTFRLGDT-GQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEW  106 (321)
T ss_pred             eeeeccCCcccceEEEecC-CceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEE
Confidence            3444434444445554433 7788888 331  223445678889999988853  23345566776666  56899999


Q ss_pred             CCCCChhhhhhccCC-----------------------------------cccCChhhHHHHH--------HHHHHHHHH
Q 003786          553 MPNKSLDFFLFDSTK-----------------------------------ENLLGWGTRVRII--------EGIAQGLLY  589 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~-----------------------------------~~~l~~~~~~~i~--------~~i~~~l~~  589 (795)
                      +.|..+...+.....                                   .+...+....+.+        -....-..+
T Consensus       107 veGe~~~~~~~~~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~~~W  186 (321)
T COG3173         107 VEGEVVWSALPPESLGRQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRLIKW  186 (321)
T ss_pred             ecceeccCcCCcccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHHHHH
Confidence            988433221110000                                   0000000001000        011223344


Q ss_pred             HHhc-----CCCcEEeccCCCCcEEECCCCCeeeecccccccc
Q 003786          590 LHQY-----SRLRVIHRDLKASNILLDKDMNPKISDFGMARIF  627 (795)
Q Consensus       590 LH~~-----~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~  627 (795)
                      |+..     +...++|+|+.+.||+++.++.+=|.||+++..-
T Consensus       187 l~~~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lG  229 (321)
T COG3173         187 LEANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATLG  229 (321)
T ss_pred             HHhcCCCcCCCceeeeCCcccCCEEEeCCCeeEEEeccccccC
Confidence            4433     2346999999999999999988999999999864

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=96.66  E-value=0.00068  Score=82.64  Aligned_cols=159  Identities=13%  Similarity=0.008  Sum_probs=113.8

Q ss_pred             HHHHHHHHHhcCCcccceeeeeee--ecceeeEEeecCCCCChhhhhhccCCc-ccCChhhHHHHHHHH-HHHHHHHHhc
Q 003786          518 FKNEIKLIAKLQHRNLVRLLGCCI--ELEEKILIYEYMPNKSLDFFLFDSTKE-NLLGWGTRVRIIEGI-AQGLLYLHQY  593 (795)
Q Consensus       518 ~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~lv~E~~~~gsL~~~l~~~~~~-~~l~~~~~~~i~~~i-~~~l~~LH~~  593 (795)
                      ...|+.-+++..|+++...+.-..  +....+.+++|+.+|.+...|.....+ ..++..-. ....++ ..+..-.|..
T Consensus      1276 ll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v-~~~~kvsvl~~~~~ls~ 1354 (2724)
T KOG1826|consen 1276 LLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPV-HLRHKVSVLNRNVILSL 1354 (2724)
T ss_pred             hhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchH-HHHHHHHHhccchhhhc
Confidence            345666667778998887665443  234567889999999998888654433 22333222 233333 4444444443


Q ss_pred             C--CCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHH
Q 003786          594 S--RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLE  671 (795)
Q Consensus       594 ~--~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~e  671 (795)
                      .  ..-.+|+++|+-|.+|..+..+|++++|+.++..+.  ........+++.|++|++.+.-.++.++|+|..|+-+|+
T Consensus      1355 tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~--~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~ 1432 (2724)
T KOG1826|consen 1355 TNLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPV--LSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYL 1432 (2724)
T ss_pred             ccCCccchhhhhhhhccceecCCcccccccccccccCch--HhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence            3  234799999999999999999999999999943322  233445678889999999998899999999999999999


Q ss_pred             HHhCCCCC
Q 003786          672 TLSSKRNT  679 (795)
Q Consensus       672 lltG~~p~  679 (795)
                      .-.|..++
T Consensus      1433 rs~~n~~f 1440 (2724)
T KOG1826|consen 1433 RSDGNAYF 1440 (2724)
T ss_pred             HhcccHHH
Confidence            98887665

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=96.63  E-value=0.012  Score=62.31  Aligned_cols=76  Identities=16%  Similarity=0.258  Sum_probs=50.1

Q ss_pred             CccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcC---CcccceeeeeeeecceeeEEeecC
Q 003786          477 FSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQ---HRNLVRLLGCCIELEEKILIYEYM  553 (795)
Q Consensus       477 ~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~E~~  553 (795)
                      .+..+.|+.|.-..+|+.+ .+++.+.||+-.   ......|..|.+-|+.|.   --.+.+.+++....+..+||+||+
T Consensus        19 i~~~~~v~GG~i~~a~~~~-~~~~~~FvK~~~---~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l   94 (288)
T PF03881_consen   19 ITSIEPVSGGDINEAYRLD-TDGGSYFVKVNS---ESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFL   94 (288)
T ss_dssp             --EEEEE--SSSSEEEEEE-TTS-EEEEEEEE---GGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE--
T ss_pred             eeeeEecCCCChhheEEEE-CCCccEEEEecC---hhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEee
Confidence            4456789999999999987 578889999875   234567889999998884   345667888887777889999999


Q ss_pred             CCC
Q 003786          554 PNK  556 (795)
Q Consensus       554 ~~g  556 (795)
                      +.+
T Consensus        95 ~~~   97 (288)
T PF03881_consen   95 EMG   97 (288)
T ss_dssp             ---
T ss_pred             cCC
Confidence            877

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=96.47  E-value=0.017  Score=62.35  Aligned_cols=73  Identities=16%  Similarity=0.247  Sum_probs=50.4

Q ss_pred             ccCcCCcccEEEeEecCc-ceEEEEEecc-------cCccchHHHHHHHHHHHhcC--Ccccc-eeeeeeeecceeeEEe
Q 003786          482 KLGEGGFGPVYKGRLLNG-QEVAVKRLSS-------QSGQGQEEFKNEIKLIAKLQ--HRNLV-RLLGCCIELEEKILIY  550 (795)
Q Consensus       482 ~LG~G~~g~Vy~~~~~~~-~~vavK~~~~-------~~~~~~~~~~~E~~~l~~l~--h~niv-~l~~~~~~~~~~~lv~  550 (795)
                      .||.|.-..||++..+++ +.++||.-..       .-+...++..-|.+.|+...  .|..| ++|.  .+.+...+||
T Consensus         2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~--~D~e~~~~vM   79 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFH--FDTEMAVTVM   79 (370)
T ss_pred             cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEE--EccccceehH
Confidence            589999999999997654 6899995421       22445567778888887764  35444 4443  3556667999


Q ss_pred             ecCCCC
Q 003786          551 EYMPNK  556 (795)
Q Consensus       551 E~~~~g  556 (795)
                      |+++..
T Consensus        80 EdL~~~   85 (370)
T TIGR01767        80 EDLSHH   85 (370)
T ss_pred             hhCccc
Confidence            998653

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>cd01100 APPLE_Factor_XI_like Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins

Probab=96.37  E-value=0.0036  Score=51.48  Aligned_cols=49  Identities=14%  Similarity=0.376  Sum_probs=35.1

Q ss_pred             ccCCCCcccccccccccCHHHHHHHHHhcCCeeeeeeccccCCCceeEEeccc
Q 003786          345 DDVKLPDFVEASLNESMNVKECEAECLKNCTCRAYANSKVTGEGSGCLMWFGD  397 (795)
Q Consensus       345 ~~~~~pd~~~~~~~~~~s~~~C~~~Cl~nCsC~ay~~~~~~~~~~~c~~w~gd  397 (795)
                      .++.++.+..... ...+.++|+..|+.||+|.||.|..   +...|+++.+.
T Consensus        10 ~~~~~~g~d~~~~-~~~s~~~Cq~~C~~~~~C~afT~~~---~~~~C~lk~~~   58 (73)
T cd01100          10 SNVDFRGGDLSTV-FASSAEQCQAACTADPGCLAFTYNT---KSKKCFLKSSE   58 (73)
T ss_pred             CCCccccCCccee-ecCCHHHHHHHcCCCCCceEEEEEC---CCCeEEcccCC
Confidence            4555555433322 3568899999999999999999963   24569988753

PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=96.34  E-value=0.014  Score=57.85  Aligned_cols=138  Identities=16%  Similarity=0.128  Sum_probs=83.8

Q ss_pred             eEEEEEecccCcc-chHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCCCCChhhhhhccCCcccCChhhHHHH
Q 003786          501 EVAVKRLSSQSGQ-GQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRI  579 (795)
Q Consensus       501 ~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i  579 (795)
                      +..+|++....-. ...-+.++.+++++++  .|+++..-  ......++.|+|-....               ...-.+
T Consensus        87 ~L~lKKi~slp~~~~~~~y~nky~v~Armh--GilrL~ND--n~~~yGvIlE~Cy~~~i---------------~~~N~i  147 (308)
T PF07387_consen   87 PLFLKKIRSLPCCINDALYFNKYRVFARMH--GILRLKND--NNYKYGVILERCYKIKI---------------NFSNFI  147 (308)
T ss_pred             hhhhhhccCCCcccchhhhhhhhhHHHHhh--heeEeecC--CCceeEEEEeeccCccc---------------chhHHH
Confidence            4566776554333 4456788999998886  46666632  44456688998843111               011112


Q ss_pred             HHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcccccccccccccccccccccccCCCCcc
Q 003786          580 IEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK  659 (795)
Q Consensus       580 ~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k  659 (795)
                      .. =+++|.-.|+.+ ...+|+|-.|+||+-|++|.+||.|=+..-.              .+..|.--   .....+.+
T Consensus       148 ~a-gi~~L~~fH~~~-~~~lHGD~np~NiM~D~~G~lKlVDP~~Ll~--------------~~V~~vN~---~Y~~lT~~  208 (308)
T PF07387_consen  148 TA-GIKDLMDFHSEN-QHCLHGDCNPDNIMCDKFGYLKLVDPVCLLE--------------NQVNMVNI---EYESLTQE  208 (308)
T ss_pred             HH-hHHHHHHhhccC-CCeecCCCChhheeecCCCCEEecChhhhhh--------------heeeEEee---eccccChH
Confidence            11 146777888554 3699999999999999999999999554321              01111110   11234566


Q ss_pred             cchhhHHHHHHHHHhCC
Q 003786          660 SDVFSFGVLLLETLSSK  676 (795)
Q Consensus       660 ~DvwSlGvil~elltG~  676 (795)
                      +.+=+|=.-++++....
T Consensus       209 aE~~~fv~s~l~~v~~~  225 (308)
T PF07387_consen  209 AEVKVFVKSCLKLVEKQ  225 (308)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            67766666667766543

The function of this family is unknown.

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=96.24  E-value=0.012  Score=59.55  Aligned_cols=31  Identities=42%  Similarity=0.575  Sum_probs=22.1

Q ss_pred             CcEEeccCCCCcEEE-CCCCCeeeeccccccc
Q 003786          596 LRVIHRDLKASNILL-DKDMNPKISDFGMARI  626 (795)
Q Consensus       596 ~~iiHrDikp~NIll-~~~~~vkL~DFGla~~  626 (795)
                      ..++|.||.|.|||+ +.++.++|+||..+..
T Consensus       143 ~v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~  174 (211)
T PF01633_consen  143 LVFCHNDLNPGNILINNKDGEVKLIDFEYAGY  174 (211)
T ss_dssp             EEEE-S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred             ceEeeccCccccEEeccCCCeEEEecHHHHhh
Confidence            358999999999999 8899999999999864

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	795
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		2e-46
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		5e-45
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		1e-34
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		1e-34
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		1e-34
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		2e-32
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		3e-32
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		1e-31
3a4o_X	286	Lyn Kinase Domain Length = 286		4e-20
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		2e-19
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		3e-19
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		3e-19
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		4e-19
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		5e-19
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		5e-19
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		5e-19
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		6e-19
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		6e-19
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		6e-19
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		6e-19
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		7e-19
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		7e-19
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		7e-19
2pl0_A	289	Lck Bound To Imatinib Length = 289		7e-19
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		7e-19
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		7e-19
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		8e-19
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		1e-18
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		1e-18
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		1e-18
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		1e-18
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		1e-18
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		1e-18
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		1e-18
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		2e-18
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-18
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		2e-18
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		2e-18
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		2e-18
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		2e-18
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		2e-18
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		2e-18
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		2e-18
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		2e-18
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		3e-18
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		3e-18
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		3e-18
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		3e-18
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		3e-18
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		3e-18
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		3e-18
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		4e-18
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		4e-18
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		4e-18
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		4e-18
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		4e-18
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		4e-18
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		4e-18
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		4e-18
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		5e-18
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		5e-18
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		5e-18
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		5e-18
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		6e-18
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		8e-18
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		8e-18
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		8e-18
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		9e-18
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		1e-17
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		3e-17
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		4e-17
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		7e-17
4h58_A	275	Braf In Complex With Compound 3 Length = 275		8e-17
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		9e-17
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		9e-17
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		1e-16
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		1e-16
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		1e-16
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		1e-16
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		1e-16
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		1e-16
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		1e-16
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		1e-16
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		2e-16
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		2e-16
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		3e-16
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		4e-16
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		4e-16
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		5e-16
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		6e-16
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		8e-16
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		8e-16
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		9e-16
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		1e-15
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		1e-15
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		2e-15
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		2e-15
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		2e-15
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		2e-15
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		2e-15
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		2e-15
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		3e-15
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		3e-15
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		3e-15
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		4e-15
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		4e-15
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		5e-15
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		5e-15
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		6e-15
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		6e-15
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		6e-15
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		6e-15
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		9e-15
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		1e-14
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		1e-14
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		1e-14
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		1e-14
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		1e-14
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		1e-14
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		1e-14
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		2e-14
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		2e-14
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		2e-14
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		2e-14
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		2e-14
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		2e-14
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		2e-14
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		2e-14
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		3e-14
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		3e-14
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		3e-14
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		3e-14
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		3e-14
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		4e-14
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		4e-14
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		4e-14
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		4e-14
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		4e-14
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		5e-14
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		5e-14
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		5e-14
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		5e-14
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		6e-14
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		6e-14
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		6e-14
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		6e-14
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		7e-14
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		8e-14
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		9e-14
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		9e-14
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		1e-13
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		1e-13
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		1e-13
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		1e-13
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		1e-13
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		1e-13
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		1e-13
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		1e-13
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		1e-13
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		1e-13
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		1e-13
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		1e-13
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		1e-13
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		1e-13
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		1e-13
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		1e-13
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		1e-13
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		1e-13
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		1e-13
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		2e-13
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		2e-13
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		2e-13
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		2e-13
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		2e-13
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		2e-13
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		2e-13
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		2e-13
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		2e-13
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		2e-13
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		2e-13
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		2e-13
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		2e-13
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		3e-13
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		3e-13
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		3e-13
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		4e-13
3q4t_A	322	Crystal Structure Of Activin Receptor Type-Iia (Acv		4e-13
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		4e-13
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		4e-13
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		4e-13
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		4e-13
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		4e-13
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		4e-13
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		4e-13
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		4e-13
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		4e-13
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		5e-13
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		5e-13
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		5e-13
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		5e-13
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		5e-13
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		5e-13
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		6e-13
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		6e-13
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		7e-13
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		7e-13
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		7e-13
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		7e-13
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		7e-13
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		7e-13
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		8e-13
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		9e-13
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		1e-12
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		1e-12
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		1e-12
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		1e-12
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		1e-12
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		1e-12
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		1e-12
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		1e-12
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		1e-12
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		1e-12
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		1e-12
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		1e-12
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		1e-12
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		1e-12
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		1e-12
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		1e-12
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		1e-12
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		1e-12
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		1e-12
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		1e-12
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		1e-12
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		2e-12
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		2e-12
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		2e-12
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		2e-12
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		2e-12
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		2e-12
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		2e-12
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		2e-12
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		2e-12
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		2e-12
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		2e-12
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		2e-12
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		2e-12
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		2e-12
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		2e-12
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		2e-12
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		2e-12
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		2e-12
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		2e-12
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		2e-12
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		2e-12
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		2e-12
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		2e-12
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		2e-12
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		2e-12
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-12
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		2e-12
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		2e-12
2qlu_A	314	Crystal Structure Of Activin Receptor Type Ii Kinas		2e-12
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		2e-12
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		3e-12
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		3e-12
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		3e-12
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		3e-12
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		3e-12
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		3e-12
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		3e-12
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		3e-12
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		3e-12
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		3e-12
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		3e-12
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		3e-12
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		3e-12
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		4e-12
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		4e-12
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		4e-12
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		4e-12
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		4e-12
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		4e-12
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		4e-12
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		4e-12
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		4e-12
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		4e-12
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		4e-12
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		5e-12
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		5e-12
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		5e-12
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		5e-12
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		5e-12
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		6e-12
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		6e-12
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		6e-12
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		6e-12
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		8e-12
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		8e-12
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		8e-12
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		1e-11
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		1e-11
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		1e-11
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		1e-11
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		1e-11
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		1e-11
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		1e-11
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		1e-11
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		1e-11
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		1e-11
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		1e-11
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		1e-11
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		1e-11
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		1e-11
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		1e-11
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		1e-11
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		1e-11
1fvr_A	327	Tie2 Kinase Domain Length = 327		1e-11
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		1e-11
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		2e-11
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		2e-11
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		2e-11
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		2e-11
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		2e-11
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		2e-11
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		2e-11
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		2e-11
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		2e-11
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		2e-11
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		2e-11
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		2e-11
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		2e-11
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		2e-11
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		2e-11
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		2e-11
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		2e-11
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		2e-11
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-11
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		2e-11
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		2e-11
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		3e-11
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		3e-11
4i20_A	329	Crystal Structure Of Monomeric (v948r) Primary Onco		3e-11
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		3e-11
4i1z_A	329	Crystal Structure Of The Monomeric (v948r) Form Of		3e-11
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		3e-11
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		3e-11
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		3e-11
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		3e-11
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		3e-11
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		4e-11
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		4e-11
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		4e-11
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		4e-11
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		4e-11
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		4e-11
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		4e-11
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		4e-11
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		4e-11
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		4e-11
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		4e-11
3w2o_A	331	Egfr Kinase Domain T790m/l858r Mutant With Tak-285		4e-11
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		5e-11
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		5e-11
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		5e-11
4i21_A	329	Crystal Structure Of L858r + T790m Egfr Kinase Doma		5e-11
2itt_A	327	Crystal Structure Of Egfr Kinase Domain L858r Mutat		5e-11
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		5e-11
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		5e-11
2eb3_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (L8		5e-11
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		5e-11
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		6e-11
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		6e-11
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		6e-11
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		6e-11
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		6e-11
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		6e-11
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		6e-11
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		7e-11
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		7e-11
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		7e-11
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		7e-11
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		8e-11
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		8e-11
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		8e-11
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		8e-11
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		8e-11
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		8e-11
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		8e-11
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		8e-11
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		8e-11
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		8e-11
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		9e-11
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		9e-11
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		9e-11
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		9e-11
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		9e-11
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		9e-11
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		1e-10
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		1e-10
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		1e-10
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		1e-10
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		1e-10
2eb2_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (G7		1e-10
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		1e-10
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-10
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		1e-10
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		1e-10
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		1e-10
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		1e-10
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		1e-10
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		1e-10
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		1e-10
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		1e-10
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		1e-10
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		1e-10
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		1e-10
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		1e-10
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		1e-10
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		1e-10
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		1e-10
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		1e-10
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		1e-10
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		1e-10
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		1e-10
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		1e-10
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		1e-10
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		1e-10
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		1e-10
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		1e-10
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		2e-10
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		2e-10
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		2e-10
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		2e-10
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		2e-10
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		2e-10
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		2e-10
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		2e-10
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		2e-10
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		2e-10
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		2e-10
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		2e-10
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		3e-10
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		3e-10
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		3e-10
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		3e-10
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		3e-10
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		3e-10
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		3e-10
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		3e-10
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		3e-10
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		3e-10
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		3e-10
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		3e-10
3pp0_A	338	Crystal Structure Of The Kinase Domain Of Human Her		4e-10
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		4e-10
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		4e-10
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		4e-10
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		4e-10
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		4e-10
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		4e-10
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		4e-10
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		5e-10
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		6e-10
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		6e-10
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		6e-10
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		6e-10
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		6e-10
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		6e-10
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		7e-10
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		7e-10
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		7e-10
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		7e-10
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		7e-10
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		7e-10
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		8e-10
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		8e-10
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		8e-10
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		8e-10
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		8e-10
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		8e-10
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		9e-10
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		9e-10
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		9e-10
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		9e-10
3a7f_A	303	Human Mst3 Kinase Length = 303		9e-10
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		9e-10
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		1e-09
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		1e-09
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		1e-09
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		1e-09
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		1e-09
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-09
3lmg_A	344	Crystal Structure Of The Erbb3 Kinase Domain In Com		1e-09
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		1e-09
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		1e-09
3kex_A	325	Crystal Structure Of The Catalytically Inactive Kin		1e-09
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		1e-09
3qup_A	323	Inhibitor Bound Structure Of The Kinase Domain Of T		1e-09
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		1e-09
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		1e-09
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		1e-09
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		2e-09
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		2e-09
4fie_A	423	Full-Length Human Pak4 Length = 423		2e-09
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		2e-09
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		2e-09
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		2e-09
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		2e-09
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		2e-09
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		2e-09
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		2e-09
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		2e-09
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		2e-09
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		2e-09
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		2e-09
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		3e-09
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		3e-09
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		3e-09
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		3e-09
3g2f_A	336	Crystal Structure Of The Kinase Domain Of Bone Morp		3e-09
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		3e-09
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		3e-09
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		3e-09
3my0_A	305	Crystal Structure Of The Acvrl1 (Alk1) Kinase Domai		3e-09
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		3e-09
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		3e-09
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		3e-09
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		4e-09
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		4e-09
3mtf_A	301	Crystal Structure Of The Acvr1 Kinase In Complex Wi		4e-09
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		4e-09
4dym_A	301	Crystal Structure Of The Acvr1 Kinase Domain In Com		4e-09
3h9r_A	330	Crystal Structure Of The Kinase Domain Of Type I Ac		4e-09
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		4e-09
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		4e-09
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		4e-09
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		4e-09
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		4e-09
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		4e-09
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		5e-09
3soa_A	444	Full-Length Human Camkii Length = 444		5e-09
3qd2_B	332	Crsytal Structure Of Mouse Perk Kinase Domain Lengt		5e-09
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		5e-09
3mdy_A	337	Crystal Structure Of The Cytoplasmic Domain Of The		5e-09
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		5e-09
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		5e-09
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		6e-09
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		6e-09
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		6e-09
3srv_A	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		6e-09
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		6e-09
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		6e-09
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		6e-09
3kk9_A	282	Camkii Substrate Complex B Length = 282		6e-09
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		6e-09
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		6e-09
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		6e-09
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		6e-09
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		6e-09
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		7e-09
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		7e-09
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		7e-09
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		7e-09
3kk8_A	284	Camkii Substrate Complex A Length = 284		7e-09
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		7e-09
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		7e-09
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		7e-09
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		7e-09
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		7e-09
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		8e-09
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		8e-09
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		8e-09
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		8e-09
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		8e-09
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		8e-09
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		8e-09
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		8e-09
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		8e-09
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		8e-09
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		8e-09
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		8e-09
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		9e-09
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		9e-09
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		9e-09
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		9e-09
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		9e-09
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		9e-09
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		9e-09
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		9e-09
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		1e-08
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		1e-08
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		1e-08
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		1e-08
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		1e-08
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		1e-08
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		1e-08
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		1e-08
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		1e-08
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		1e-08
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		1e-08
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		1e-08
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		1e-08
4fl3_A	635	Structural And Biophysical Characterization Of The		1e-08
4fl2_A	636	Structural And Biophysical Characterization Of The		1e-08
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		1e-08
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		1e-08
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		1e-08
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		1e-08
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		1e-08
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		1e-08
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		1e-08
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		1e-08
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		1e-08
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		1e-08
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		1e-08
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-08
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-08
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		2e-08
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-08
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		2e-08
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		2e-08
3g51_A	325	Structural Diversity Of The Active Conformation Of		2e-08
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		2e-08
1y6a_A	366	Crystal Structure Of Vegfr2 In Complex With A 2-Ani		2e-08
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		2e-08
3vid_A	356	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		2e-08
3vhe_A	359	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		2e-08
3vhk_A	368	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-08
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		2e-08
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		2e-08
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		2e-08
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		2e-08
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		2e-08
3hng_A	360	Crystal Structure Of Vegfr1 In Complex With N-(4-ch		3e-08
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		3e-08
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		3e-08
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		3e-08
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		3e-08
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		3e-08
3enm_A	316	The Structure Of The Map2k Mek6 Reveals An Autoinhi		3e-08
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		3e-08
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		3e-08
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		3e-08
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		3e-08
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		3e-08
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		4e-08
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		4e-08
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		4e-08
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		4e-08
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		4e-08
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		4e-08
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		4e-08
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		4e-08
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		5e-08
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		5e-08
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		5e-08
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		5e-08
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		5e-08
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		5e-08
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		5e-08
3b2t_A	311	Structure Of Phosphotransferase Length = 311		5e-08
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		5e-08
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		6e-08
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		6e-08
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		6e-08
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		6e-08
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		6e-08
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		6e-08
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		6e-08
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		7e-08
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		7e-08
1vjy_A	303	Crystal Structure Of A Naphthyridine Inhibitor Of H		9e-08
1rw8_A	301	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		9e-08
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		9e-08
1py5_A	326	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		9e-08
3tzm_A	309	Tgf-Beta Receptor Type 1 In Complex With Sb431542 L		9e-08
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		9e-08
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		1e-07
1b6c_B	342	Crystal Structure Of The Cytoplasmic Domain Of The		1e-07
2pml_X	348	Crystal Structure Of Pfpk7 In Complex With An Atp A		1e-07
2wot_A	306	Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)		1e-07
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-07
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		1e-07
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		1e-07
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		1e-07
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		1e-07
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		2e-07
2oza_B	366	Structure Of P38alpha Complex Length = 366		2e-07
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		2e-07
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		2e-07
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		2e-07
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		2e-07
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		2e-07
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		2e-07
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		2e-07
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		2e-07
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-07
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		2e-07
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		2e-07
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		2e-07
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		2e-07
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		2e-07
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		2e-07
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		2e-07
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		3e-07
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		3e-07
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		3e-07
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		3e-07
3hec_A	348	P38 In Complex With Imatinib Length = 348		3e-07
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		3e-07
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		3e-07
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		3e-07
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		3e-07
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		3e-07
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		3e-07
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		3e-07
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		3e-07
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		3e-07
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		4e-07
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		4e-07
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		4e-07
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		4e-07
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		4e-07
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		4e-07
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		4e-07
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		4e-07
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		4e-07
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		4e-07
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		4e-07
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		4e-07
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		4e-07
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		4e-07
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		4e-07
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		4e-07
2ac5_A	316	Structure Of Human Mnk2 Kinase Domain Mutant D228g		4e-07
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		4e-07
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		5e-07
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		5e-07
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		5e-07
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		5e-07
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		5e-07
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		5e-07
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		5e-07
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		5e-07
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		5e-07
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		5e-07
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		6e-07
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		6e-07
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		6e-07
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		6e-07
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		6e-07
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		6e-07
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		7e-07
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		7e-07
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		7e-07
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		8e-07
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		8e-07
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		8e-07
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		9e-07
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		9e-07
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		1e-06
3g0f_A	336	Kit Kinase Domain Mutant D816h In Complex With Suni		1e-06
1pkg_A	329	Structure Of A C-kit Kinase Product Complex Length		1e-06
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		1e-06
1t45_A	331	Structural Basis For The Autoinhibition And Sti-571		1e-06
3g0e_A	336	Kit Kinase Domain In Complex With Sunitinib Length		1e-06
1t46_A	313	Structural Basis For The Autoinhibition And Sti-571		1e-06
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		2e-06
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		2e-06
2ac3_A	316	Structure Of Human Mnk2 Kinase Domain Length = 316		2e-06
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		2e-06
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		2e-06
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		2e-06
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		2e-06
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		2e-06
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		3e-06
4exu_A	371	Mapk13, Inactive Form Length = 371		3e-06
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		3e-06
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		3e-06
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		3e-06
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		3e-06
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		3e-06
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		3e-06
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		3e-06
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		3e-06
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		3e-06
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		3e-06
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		3e-06
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		3e-06
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		3e-06
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		3e-06
3fpq_A	290	Crystal Structure Of The Kinase Domain Of Wnk1 Leng		3e-06
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		3e-06
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		3e-06
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		3e-06
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		4e-06
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		4e-06
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		4e-06
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		4e-06
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		4e-06
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		4e-06
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		4e-06
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		4e-06
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		4e-06
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		4e-06
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		4e-06
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		4e-06
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		4e-06
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		4e-06
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		4e-06
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		4e-06
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		4e-06
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		4e-06
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		5e-06
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		5e-06
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		5e-06
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		5e-06
2y4i_B	319	Ksr2-Mek1 Heterodimer Length = 319		5e-06
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		5e-06
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		5e-06
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		5e-06
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		5e-06
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		6e-06
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		6e-06
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		6e-06
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		7e-06
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		7e-06
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		7e-06
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		7e-06
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		9e-06
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		9e-06
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		9e-06
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		1e-05
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		1e-05
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		1e-05
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		2e-05
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		2e-05
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		2e-05
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		2e-05
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		2e-05
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		2e-05
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		2e-05
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		2e-05
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		2e-05
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		2e-05
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		2e-05
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		2e-05
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		2e-05
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		2e-05
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		3e-05
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		3e-05
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		3e-05
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		3e-05
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		3e-05
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		3e-05
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		3e-05
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		3e-05
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		3e-05
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		3e-05
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		3e-05
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		3e-05
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		3e-05
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		3e-05
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		3e-05
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		3e-05
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		3e-05
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		3e-05
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		3e-05
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		3e-05
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		3e-05
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		3e-05
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		3e-05
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		4e-05
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		4e-05
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		4e-05
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		5e-05
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		5e-05
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		5e-05
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		5e-05
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		5e-05
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		5e-05
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		5e-05
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		5e-05
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		5e-05
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		5e-05
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		6e-05
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		6e-05
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		6e-05
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		6e-05
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		6e-05
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		6e-05
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		7e-05
4ae6_A	343	Structure And Function Of The Human Sperm-specific		7e-05
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		7e-05
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		7e-05
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		7e-05
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		7e-05
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		7e-05
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		7e-05
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		7e-05
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		7e-05
4ae9_A	343	Structure And Function Of The Human Sperm-specific		7e-05
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		7e-05
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		7e-05
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		7e-05
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		7e-05
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		7e-05
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		7e-05
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		7e-05
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		7e-05
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		7e-05
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		7e-05
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		7e-05
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		7e-05
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		7e-05
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		7e-05
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		7e-05
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		7e-05
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		7e-05
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		7e-05
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		7e-05
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		7e-05
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		7e-05
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		7e-05
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		7e-05
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		7e-05
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		8e-05
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		8e-05
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		8e-05
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		8e-05
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		8e-05
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		8e-05
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		1e-04
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		1e-04
3rgf_A	405	Crystal Structure Of Human Cdk8CYCC Length = 405		1e-04
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		1e-04
3ll6_A	337	Crystal Structure Of The Human Cyclin G Associated		1e-04
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		1e-04
3p23_A	432	Crystal Structure Of The Human Kinase And Rnase Dom		1e-04
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		1e-04
2buj_A	317	Crystal Structure Of The Human Serine-Threonine Kin		1e-04
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		2e-04
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		2e-04
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		2e-04
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		2e-04
2iwi_A	312	Crystal Structure Of The Human Pim2 In Complex With		2e-04
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		2e-04
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		2e-04
3p1a_A	311	Structure Of Human Membrane-Associated Tyrosine- An		3e-04
3h9f_A	313	Crystal Structure Of Human Dual Specificity Protein		3e-04
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		4e-04
3cek_A	313	Crystal Structure Of Human Dual Specificity Protein		4e-04
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		4e-04
3pg1_A	362	Map Kinase Lmampk10 From Leishmania Major (1.95 Ang		4e-04
3sdj_A	448	Structure Of Rnase-Inactive Point Mutant Of Oligome		5e-04
3uib_A	362	Map Kinase Lmampk10 From Leishmania Major In Comple		5e-04
2x9e_A	317	Human Mps1 In Complex With Nms-P715 Length = 317		5e-04
3fbv_A	448	Crystal Structure Of The Oligomer Formed By The Kin		5e-04
3hmn_A	342	Crystal Structure Of Human Mps1 Catalytic Domain In		6e-04
3kmw_A	271	Crystal Structure Of The IlkALPHA-Parvin Core Compl		6e-04
3nie_A	429	Crystal Structure Of Pf11_0147 Length = 429		6e-04
4g3d_A	371	Crystal Structure Of Human Nf-kappab Inducing Kinas		7e-04
3vqu_A	320	Crystal Structure Of Human Mps1 Catalytic Domain In		7e-04
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		7e-04
3dbq_A	343	Crystal Structure Of Ttk Kinase Domain Length = 343		7e-04
4dn5_A	356	Crystal Structure Of Nf-kb-inducing Kinase (nik) Le		8e-04

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score =  184 bits (466), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 111/288 (38%), Positives = 159/288 (55%), Gaps = 6/288 (2%)
Query: 465 FSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQE-EFKNEIK 523
           FSL  +  A+ NFS +N LG GGFG VYKGRL +G  VAVKRL  +  QG E +F+ E++
Sbjct: 28  FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 524 LIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTK-ENLLGWGTRVRIIEG 582
           +I+   HRNL+R                 M N S+   L +  + +  L W  R RI  G
Sbjct: 88  MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 147
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
            A+GL YLH +   ++IHRD+KA+NILLD++    + DFG+A++    +       + GT
Sbjct: 148 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA-VRGT 206
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTD---FSNTNSLTLLGHAWDLWKD 699
            G+++PEY   G  S K+DVF +GV+LLE ++ +R  D    +N + + LL     L K+
Sbjct: 207 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 266
Query: 700 DRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML 747
            +   L+D  LQ       + + I V LLC Q    +RP M EVV ML
Sbjct: 267 KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score =  179 bits (454), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 109/288 (37%), Positives = 157/288 (54%), Gaps = 6/288 (2%)
Query: 465 FSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQE-EFKNEIK 523
           FSL  +  A+ NF  +N LG GGFG VYKGRL +G  VAVKRL  +  QG E +F+ E++
Sbjct: 20  FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVE 79
Query: 524 LIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTK-ENLLGWGTRVRIIEG 582
           +I+   HRNL+R                 M N S+   L +  + +  L W  R RI  G
Sbjct: 80  MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 139
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
            A+GL YLH +   ++IHRD+KA+NILLD++    + DFG+A++    +       + G 
Sbjct: 140 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA-VRGX 198
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTD---FSNTNSLTLLGHAWDLWKD 699
            G+++PEY   G  S K+DVF +GV+LLE ++ +R  D    +N + + LL     L K+
Sbjct: 199 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 258
Query: 700 DRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML 747
            +   L+D  LQ       + + I V LLC Q    +RP M EVV ML
Sbjct: 259 KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score =  145 bits (366), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/305 (34%), Positives = 149/305 (48%), Gaps = 20/305 (6%)
Query: 459 DSWFPMFSLASVSAATANFSTE------NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQ-- 510
           D+ F  FS   +   T NF         NK+GEGGFG VYKG  +N   VAVK+L++   
Sbjct: 9   DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVD 67
Query: 511 --SGQGQEEFKNEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSL--DFFLFDST 566
             + + +++F  EIK++AK QH NLV                  MPN SL       D T
Sbjct: 68  ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT 127
Query: 567 KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARI 626
               L W  R +I +G A G+ +LH+      IHRD+K++NILLD+    KISDFG+AR 
Sbjct: 128 PP--LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARA 182
Query: 627 FGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNS 686
                      RIVGT  YM+PE A +G  + KSD++SFGV+LLE ++     D      
Sbjct: 183 SEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ 241
Query: 687 LTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM 746
           L L        ++    + ID  + N+A    +    +V   C+ E    RP + +V  +
Sbjct: 242 LLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL 300
Query: 747 LTNKT 751
           L   T
Sbjct: 301 LQEMT 305

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score =  145 bits (365), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/305 (34%), Positives = 149/305 (48%), Gaps = 20/305 (6%)
Query: 459 DSWFPMFSLASVSAATANFSTE------NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQ-- 510
           D+ F  FS   +   T NF         NK+GEGGFG VYKG  +N   VAVK+L++   
Sbjct: 3   DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVD 61
Query: 511 --SGQGQEEFKNEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSL--DFFLFDST 566
             + + +++F  EIK++AK QH NLV                  MPN SL       D T
Sbjct: 62  ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT 121
Query: 567 KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARI 626
               L W  R +I +G A G+ +LH+      IHRD+K++NILLD+    KISDFG+AR 
Sbjct: 122 PP--LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARA 176
Query: 627 FGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNS 686
                      RIVGT  YM+PE A +G  + KSD++SFGV+LLE ++     D      
Sbjct: 177 SEKFAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ 235
Query: 687 LTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM 746
           L L        ++    + ID  + N+A    +    +V   C+ E    RP + +V  +
Sbjct: 236 LLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL 294
Query: 747 LTNKT 751
           L   T
Sbjct: 295 LQEMT 299

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score =  145 bits (365), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/305 (34%), Positives = 149/305 (48%), Gaps = 20/305 (6%)
Query: 459 DSWFPMFSLASVSAATANFSTE------NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQ-- 510
           D+ F  FS   +   T NF         NK+GEGGFG VYKG  +N   VAVK+L++   
Sbjct: 9   DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVD 67
Query: 511 --SGQGQEEFKNEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSL--DFFLFDST 566
             + + +++F  EIK++AK QH NLV                  MPN SL       D T
Sbjct: 68  ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT 127
Query: 567 KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARI 626
               L W  R +I +G A G+ +LH+      IHRD+K++NILLD+    KISDFG+AR 
Sbjct: 128 PP--LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARA 182
Query: 627 FGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNS 686
                      RIVGT  YM+PE A +G  + KSD++SFGV+LLE ++     D      
Sbjct: 183 SEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ 241
Query: 687 LTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM 746
           L L        ++    + ID  + N+A    +    +V   C+ E    RP + +V  +
Sbjct: 242 LLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL 300
Query: 747 LTNKT 751
           L   T
Sbjct: 301 LQEMT 305

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score =  137 bits (345), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/282 (34%), Positives = 155/282 (54%), Gaps = 9/282 (3%)
Query: 467 LASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIA 526
           L  +  AT NF  +  +G G FG VYKG L +G +VA+KR + +S QG EEF+ EI+ ++
Sbjct: 31  LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 527 KLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENL-LGWGTRVRIIEGIAQ 585
             +H +LV                  M N +L   L+ S    + + W  R+ I  G A+
Sbjct: 91  FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL-QSKTKRIV-GTY 643
           GL YLH  +   +IHRD+K+ NILLD++  PKI+DFG+++   G EL Q+    +V GT 
Sbjct: 151 GLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISK--KGTELDQTHLXXVVKGTL 205
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGH-AWDLWKDDRA 702
           GY+ PEY  +G  + KSDV+SFGV+L E L ++     S    +  L   A +   + + 
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265
Query: 703 WELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVV 744
            +++DP L ++     L ++ +  + C+   + DRP+M +V+
Sbjct: 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score =  137 bits (345), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/282 (34%), Positives = 155/282 (54%), Gaps = 9/282 (3%)
Query: 467 LASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIA 526
           L  +  AT NF  +  +G G FG VYKG L +G +VA+KR + +S QG EEF+ EI+ ++
Sbjct: 31  LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 527 KLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENL-LGWGTRVRIIEGIAQ 585
             +H +LV                  M N +L   L+ S    + + W  R+ I  G A+
Sbjct: 91  FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL-QSKTKRIV-GTY 643
           GL YLH  +   +IHRD+K+ NILLD++  PKI+DFG+++   G EL Q+    +V GT 
Sbjct: 151 GLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISK--KGTELGQTHLXXVVKGTL 205
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGH-AWDLWKDDRA 702
           GY+ PEY  +G  + KSDV+SFGV+L E L ++     S    +  L   A +   + + 
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265
Query: 703 WELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVV 744
            +++DP L ++     L ++ +  + C+   + DRP+M +V+
Sbjct: 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score =  135 bits (339), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 103/302 (34%), Positives = 142/302 (47%), Gaps = 20/302 (6%)
Query: 462 FPMFSLASVSAATANFSTE------NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQ----S 511
           F  FS   +   T NF         NK GEGGFG VYKG  +N   VAVK+L++     +
Sbjct: 3   FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITT 61
Query: 512 GQGQEEFKNEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSL--DFFLFDSTKEN 569
            + +++F  EIK+ AK QH NLV                   PN SL       D T   
Sbjct: 62  EELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPP- 120
Query: 570 LLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG 629
            L W  R +I +G A G+ +LH+      IHRD+K++NILLD+    KISDFG+AR    
Sbjct: 121 -LSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEK 176
Query: 630 DELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTL 689
                   RIVGT  Y +PE A +G  + KSD++SFGV+LLE ++     D      L L
Sbjct: 177 FAQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 235
Query: 690 LGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
                   ++    + ID    N+A    +    +V   C+ E    RP + +V  +L  
Sbjct: 236 DIKEEIEDEEKTIEDYIDKK-XNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQE 294
Query: 750 KT 751
            T
Sbjct: 295 XT 296

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 96.7 bits (239), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 126/272 (46%), Gaps = 26/272 (9%)
Query: 481 NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
            +LG G FG V+ G   N  +VAVK L   +   Q  F  E  L+  LQH  LVR     
Sbjct: 19  KRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA-FLEEANLMKTLQHDKLVRLYAVV 77
Query: 541 XXXXXXXXXXXXMPNKSL-DFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                       M   SL DF   D   + LL     +     IA+G+ Y+    R   I
Sbjct: 78  TREEPIYIITEYMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIE---RKNYI 132
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRDL+A+N+L+ + +  KI+DFG+AR+   +E  ++         + +PE    G F+IK
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPEAINFGCFTIK 191
Query: 660 SDVFSFGVLLLETLSSKRNTDFSNTNS--LTLLGHAWDLWKDDRAWELIDPTLQNEASYL 717
           SDV+SFG+LL E ++  +      TN+  +T L   + +           P ++N    L
Sbjct: 192 SDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRM-----------PRVENCPDEL 240
Query: 718 ILNRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
                 ++  +C +E A +RPT   + S+L +
Sbjct: 241 -----YDIMKMCWKEKAEERPTFDYLQSVLDD 267

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 100/198 (50%), Gaps = 6/198 (3%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQE--EFKNEIKLIAKLQHRNL 533
           + + + K+G G FG V++    +G +VAVK L  Q    +   EF  E+ ++ +L+H N+
Sbjct: 38  DLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 534 VRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY 593
           V                  +   SL   L  S     L    R+ +   +A+G+ YLH  
Sbjct: 97  VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQ 653
           +   ++HRDLK+ N+L+DK    K+ DFG++R+     L SK     GT  +M+PE  + 
Sbjct: 157 NP-PIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXA--AGTPEWMAPEVLRD 213
Query: 654 GLFSIKSDVFSFGVLLLE 671
              + KSDV+SFGV+L E
Sbjct: 214 EPSNEKSDVYSFGVILWE 231

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 94.0 bits (232), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 101/198 (51%), Gaps = 6/198 (3%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQE--EFKNEIKLIAKLQHRNL 533
           + + + K+G G FG V++    +G +VAVK L  Q    +   EF  E+ ++ +L+H N+
Sbjct: 38  DLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 534 VRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY 593
           V                  +   SL   L  S     L    R+ +   +A+G+ YLH  
Sbjct: 97  VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQ 653
           +   ++HR+LK+ N+L+DK    K+ DFG++R+     L SK+    GT  +M+PE  + 
Sbjct: 157 NP-PIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSA--AGTPEWMAPEVLRD 213
Query: 654 GLFSIKSDVFSFGVLLLE 671
              + KSDV+SFGV+L E
Sbjct: 214 EPSNEKSDVYSFGVILWE 231

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 94.0 bits (232), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 126/272 (46%), Gaps = 26/272 (9%)
Query: 481 NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
            KLG G FG V+ G   N  +VAVK L   +   Q  F  E  L+  LQH  LVR     
Sbjct: 18  KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA-FLEEANLMKTLQHDKLVRLYAVV 76
Query: 541 XXXXXXXXXXXXMPNKSL-DFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                       M   SL DF   D   + LL     +     IA+G+ Y+    R   I
Sbjct: 77  TKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIE---RKNYI 131
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRDL+A+N+L+ + +  KI+DFG+AR+   +E  ++         + +PE    G F+IK
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPEAINFGCFTIK 190
Query: 660 SDVFSFGVLLLETLSSKRNTDFSNTNS--LTLLGHAWDLWKDDRAWELIDPTLQNEASYL 717
           S+V+SFG+LL E ++  +      TN+  ++ L   + +           P ++N    L
Sbjct: 191 SNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRM-----------PRMENCPDEL 239
Query: 718 ILNRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
                 ++  +C +E A +RPT   + S+L +
Sbjct: 240 -----YDIMKMCWKEKAEERPTFDYLQSVLDD 266

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 93.6 bits (231), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 125/274 (45%), Gaps = 31/274 (11%)
Query: 481 NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
            +LG G FG V+ G      +VAVK L  Q     + F  E  L+ +LQH+ LVR     
Sbjct: 19  ERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 541 XXXXXXXXXXXXMPNKSLDFFL-----FDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSR 595
                       M N SL  FL        T   LL    +      IA+G+ ++ + + 
Sbjct: 78  TQEPIYIITEY-MENGSLVDFLKTPSGIKLTINKLLDMAAQ------IAEGMAFIEERN- 129
Query: 596 LRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGL 655
              IHRDL+A+NIL+   ++ KI+DFG+AR+   +E  ++         + +PE    G 
Sbjct: 130 --YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGT 186
Query: 656 FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEAS 715
           F+IKSDV+SFG+LL E ++  R      TN   +          +R + ++ P    E  
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-------ERGYRMVRPDNCPEEL 239
Query: 716 YLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
           Y ++        LC +E   DRPT   + S+L +
Sbjct: 240 YQLMR-------LCWKERPEDRPTFDYLRSVLED 266

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 93.2 bits (230), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 125/274 (45%), Gaps = 31/274 (11%)
Query: 481 NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
            +LG G FG V+ G      +VAVK L  Q     + F  E  L+ +LQH+ LVR     
Sbjct: 21  ERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 79
Query: 541 XXXXXXXXXXXXMPNKSLDFFL-----FDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSR 595
                       M N SL  FL        T   LL    +      IA+G+ ++ + + 
Sbjct: 80  TQEPIYIITEY-MENGSLVDFLKTPSGIKLTINKLLDMAAQ------IAEGMAFIEERN- 131
Query: 596 LRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGL 655
              IHRDL+A+NIL+   ++ KI+DFG+AR+   +E  ++         + +PE    G 
Sbjct: 132 --YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGT 188
Query: 656 FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEAS 715
           F+IKSDV+SFG+LL E ++  R      TN   +          +R + ++ P    E  
Sbjct: 189 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-------ERGYRMVRPDNCPEEL 241
Query: 716 YLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
           Y ++        LC +E   DRPT   + S+L +
Sbjct: 242 YQLMR-------LCWKERPEDRPTFDYLRSVLED 268

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 93.2 bits (230), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 125/274 (45%), Gaps = 31/274 (11%)
Query: 481 NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
            +LG G FG V+ G      +VAVK L  Q     + F  E  L+ +LQH+ LVR     
Sbjct: 19  ERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 541 XXXXXXXXXXXXMPNKSLDFFL-----FDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSR 595
                       M N SL  FL        T   LL    +      IA+G+ ++ + + 
Sbjct: 78  TQEPIYIITEY-MENGSLVDFLKTPSGIKLTINKLLDMAAQ------IAEGMAFIEERN- 129
Query: 596 LRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGL 655
              IHRDL+A+NIL+   ++ KI+DFG+AR+   +E  ++         + +PE    G 
Sbjct: 130 --YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGT 186
Query: 656 FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEAS 715
           F+IKSDV+SFG+LL E ++  R      TN   +          +R + ++ P    E  
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-------ERGYRMVRPDNCPEEL 239
Query: 716 YLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
           Y ++        LC +E   DRPT   + S+L +
Sbjct: 240 YQLMR-------LCWKERPEDRPTFDYLRSVLED 266

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 93.2 bits (230), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 125/274 (45%), Gaps = 31/274 (11%)
Query: 481 NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
            +LG G FG V+ G      +VAVK L  Q     + F  E  L+ +LQH+ LVR     
Sbjct: 20  ERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 78
Query: 541 XXXXXXXXXXXXMPNKSLDFFL-----FDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSR 595
                       M N SL  FL        T   LL    +      IA+G+ ++ + + 
Sbjct: 79  TQEPIYIITEY-MENGSLVDFLKTPSGIKLTINKLLDMAAQ------IAEGMAFIEERN- 130
Query: 596 LRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGL 655
              IHRDL+A+NIL+   ++ KI+DFG+AR+   +E  ++         + +PE    G 
Sbjct: 131 --YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGT 187
Query: 656 FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEAS 715
           F+IKSDV+SFG+LL E ++  R      TN   +          +R + ++ P    E  
Sbjct: 188 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-------ERGYRMVRPDNCPEEL 240
Query: 716 YLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
           Y ++        LC +E   DRPT   + S+L +
Sbjct: 241 YQLMR-------LCWKERPEDRPTFDYLRSVLED 267

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 93.2 bits (230), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 125/274 (45%), Gaps = 31/274 (11%)
Query: 481 NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
            +LG G FG V+ G      +VAVK L  Q     + F  E  L+ +LQH+ LVR     
Sbjct: 25  ERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 541 XXXXXXXXXXXXMPNKSLDFFL-----FDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSR 595
                       M N SL  FL        T   LL    +      IA+G+ ++ + + 
Sbjct: 84  TQEPIYIITEY-MENGSLVDFLKTPSGIKLTINKLLDMAAQ------IAEGMAFIEERN- 135
Query: 596 LRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGL 655
              IHRDL+A+NIL+   ++ KI+DFG+AR+   +E  ++         + +PE    G 
Sbjct: 136 --YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGT 192
Query: 656 FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEAS 715
           F+IKSDV+SFG+LL E ++  R      TN   +          +R + ++ P    E  
Sbjct: 193 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-------ERGYRMVRPDNCPEEL 245
Query: 716 YLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
           Y ++        LC +E   DRPT   + S+L +
Sbjct: 246 YQLMR-------LCWKERPEDRPTFDYLRSVLED 272

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 93.2 bits (230), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 125/274 (45%), Gaps = 31/274 (11%)
Query: 481 NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
            +LG G FG V+ G      +VAVK L  Q     + F  E  L+ +LQH+ LVR     
Sbjct: 24  ERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 82
Query: 541 XXXXXXXXXXXXMPNKSLDFFL-----FDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSR 595
                       M N SL  FL        T   LL    +      IA+G+ ++ + + 
Sbjct: 83  TQEPIYIITEY-MENGSLVDFLKTPSGIKLTINKLLDMAAQ------IAEGMAFIEERN- 134
Query: 596 LRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGL 655
              IHRDL+A+NIL+   ++ KI+DFG+AR+   +E  ++         + +PE    G 
Sbjct: 135 --YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGT 191
Query: 656 FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEAS 715
           F+IKSDV+SFG+LL E ++  R      TN   +          +R + ++ P    E  
Sbjct: 192 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-------ERGYRMVRPDNCPEEL 244
Query: 716 YLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
           Y ++        LC +E   DRPT   + S+L +
Sbjct: 245 YQLMR-------LCWKERPEDRPTFDYLRSVLED 271

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 92.8 bits (229), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 125/274 (45%), Gaps = 31/274 (11%)
Query: 481 NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
            +LG G FG V+ G      +VAVK L  Q     + F  E  L+ +LQH+ LVR     
Sbjct: 19  ERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 541 XXXXXXXXXXXXMPNKSLDFFL-----FDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSR 595
                       M N SL  FL        T   LL    +      IA+G+ ++ + + 
Sbjct: 78  TQEPIYIITEY-MENGSLVDFLKTPSGIKLTINKLLDMAAQ------IAEGMAFIEERN- 129
Query: 596 LRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGL 655
              IHRDL+A+NIL+   ++ KI+DFG+AR+   +E  ++         + +PE    G 
Sbjct: 130 --YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGT 186
Query: 656 FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEAS 715
           F+IKSDV+SFG+LL E ++  R      TN   +          +R + ++ P    E  
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-------ERGYRMVRPDNCPEEL 239
Query: 716 YLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
           Y ++        LC +E   DRPT   + S+L +
Sbjct: 240 YQLMR-------LCWKERPEDRPTFDYLRSVLED 266

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 92.8 bits (229), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 126/270 (46%), Gaps = 23/270 (8%)
Query: 481 NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
            +LG G FG V+ G      +VAVK L  Q     + F  E  L+ +LQH+ LVR     
Sbjct: 28  ERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 86
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENL-LGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                       M N SL  FL   T   + L     + +   IA+G+ ++ + +    I
Sbjct: 87  TQEPIYIITEY-MENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YI 140
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRDL+A+NIL+   ++ KI+DFG+AR+   +E  ++         + +PE    G F+IK
Sbjct: 141 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIK 199
Query: 660 SDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLIL 719
           SDV+SFG+LL E ++  R      TN   +          +R + ++ P    E  Y ++
Sbjct: 200 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-------ERGYRMVRPDNCPEELYQLM 252
Query: 720 NRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
                   LC +E   DRPT   + S+L +
Sbjct: 253 R-------LCWKERPEDRPTFDYLRSVLED 275

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 92.8 bits (229), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 99/198 (50%), Gaps = 7/198 (3%)
Query: 480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           E KLG+G FG V+ G       VA+K L   +    E F  E +++ KL+H  LV+    
Sbjct: 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                             LDF   ++ K   L     V +   IA G+ Y+    R+  +
Sbjct: 248 VSEEPIYIVTEYMSKGSLLDFLKGETGK--YLRLPQLVDMAAQIASGMAYVE---RMNYV 302
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRDL+A+NIL+ +++  K++DFG+AR+   +E  ++         + +PE A  G F+IK
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGRFTIK 361
Query: 660 SDVFSFGVLLLETLSSKR 677
           SDV+SFG+LL E  +  R
Sbjct: 362 SDVWSFGILLTELTTKGR 379

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 92.8 bits (229), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 126/270 (46%), Gaps = 23/270 (8%)
Query: 481 NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
            +LG G FG V+ G      +VAVK L  Q     + F  E  L+ +LQH+ LVR     
Sbjct: 25  ERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENL-LGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                       M N SL  FL   T   + L     + +   IA+G+ ++ + +    I
Sbjct: 84  TQEPIYIITEY-MENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YI 137
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRDL+A+NIL+   ++ KI+DFG+AR+   +E  ++         + +PE    G F+IK
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIK 196
Query: 660 SDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLIL 719
           SDV+SFG+LL E ++  R      TN   +          +R + ++ P    E  Y ++
Sbjct: 197 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-------ERGYRMVRPDNCPEELYQLM 249
Query: 720 NRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
                   LC +E   DRPT   + S+L +
Sbjct: 250 R-------LCWKERPEDRPTFDYLRSVLED 272

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 92.8 bits (229), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 125/274 (45%), Gaps = 31/274 (11%)
Query: 481 NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
            +LG G FG V+ G      +VAVK L  Q     + F  E  L+ +LQH+ LVR     
Sbjct: 14  ERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 72
Query: 541 XXXXXXXXXXXXMPNKSLDFFL-----FDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSR 595
                       M N SL  FL        T   LL    +      IA+G+ ++ + + 
Sbjct: 73  TQEPIYIITEY-MENGSLVDFLKTPSGIKLTINKLLDMAAQ------IAEGMAFIEERN- 124
Query: 596 LRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGL 655
              IHRDL+A+NIL+   ++ KI+DFG+AR+   +E  ++         + +PE    G 
Sbjct: 125 --YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGT 181
Query: 656 FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEAS 715
           F+IKSDV+SFG+LL E ++  R      TN   +          +R + ++ P    E  
Sbjct: 182 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-------ERGYRMVRPDNCPEEL 234
Query: 716 YLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
           Y ++        LC +E   DRPT   + S+L +
Sbjct: 235 YQLMR-------LCWKERPEDRPTFDYLRSVLED 261

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 92.8 bits (229), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 126/270 (46%), Gaps = 23/270 (8%)
Query: 481 NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
            +LG G FG V+ G      +VAVK L  Q     + F  E  L+ +LQH+ LVR     
Sbjct: 29  ERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 87
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENL-LGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                       M N SL  FL   T   + L     + +   IA+G+ ++ + +    I
Sbjct: 88  TQEPIYIITEY-MENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YI 141
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRDL+A+NIL+   ++ KI+DFG+AR+   +E  ++         + +PE    G F+IK
Sbjct: 142 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIK 200
Query: 660 SDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLIL 719
           SDV+SFG+LL E ++  R      TN   +          +R + ++ P    E  Y ++
Sbjct: 201 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-------ERGYRMVRPDNCPEELYQLM 253
Query: 720 NRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
                   LC +E   DRPT   + S+L +
Sbjct: 254 R-------LCWKERPEDRPTFDYLRSVLED 276

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 92.8 bits (229), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 126/270 (46%), Gaps = 23/270 (8%)
Query: 481 NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
            +LG G FG V+ G      +VAVK L  Q     + F  E  L+ +LQH+ LVR     
Sbjct: 27  ERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 85
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENL-LGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                       M N SL  FL   T   + L     + +   IA+G+ ++ + +    I
Sbjct: 86  TQEPIYIITEY-MENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YI 139
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRDL+A+NIL+   ++ KI+DFG+AR+   +E  ++         + +PE    G F+IK
Sbjct: 140 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIK 198
Query: 660 SDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLIL 719
           SDV+SFG+LL E ++  R      TN   +          +R + ++ P    E  Y ++
Sbjct: 199 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-------ERGYRMVRPDNCPEELYQLM 251
Query: 720 NRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
                   LC +E   DRPT   + S+L +
Sbjct: 252 R-------LCWKERPEDRPTFDYLRSVLED 274

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 92.8 bits (229), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 99/198 (50%), Gaps = 7/198 (3%)
Query: 480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           E KLG+G FG V+ G       VA+K L   +    E F  E +++ KL+H  LV+    
Sbjct: 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                             LDF   ++ K   L     V +   IA G+ Y+    R+  +
Sbjct: 248 VSEEPIYIVTEYMSKGSLLDFLKGETGK--YLRLPQLVDMAAQIASGMAYVE---RMNYV 302
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRDL+A+NIL+ +++  K++DFG+AR+   +E  ++         + +PE A  G F+IK
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGRFTIK 361
Query: 660 SDVFSFGVLLLETLSSKR 677
           SDV+SFG+LL E  +  R
Sbjct: 362 SDVWSFGILLTELTTKGR 379

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 92.4 bits (228), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 123/273 (45%), Gaps = 31/273 (11%)
Query: 481 NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
            ++G G FG V+ G  LN  +VA+K +  +    +E+F  E +++ KL H  LV+     
Sbjct: 13  QEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIH 600
                       M +  L  +L   T+  L    T + +   + +G+ YL + S   VIH
Sbjct: 72  LEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAS---VIH 126
Query: 601 RDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT---YGYMSPEYAQQGLFS 657
           RDL A N L+ ++   K+SDFGM R    D+  S T    GT     + SPE      +S
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GTKFPVKWASPEVFSFSRYS 182
Query: 658 IKSDVFSFGVLLLETLSSKR--NTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEAS 715
            KSDV+SFGVL+ E  S  +    + SN+  +  +   + L+K         P L +   
Sbjct: 183 SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK---------PRLASTHV 233
Query: 716 YLILNRYINVGLLCVQEDAADRPTMFEVVSMLT 748
           Y I+N        C +E   DRP    ++  L 
Sbjct: 234 YQIMNH-------CWKERPEDRPAFSRLLRQLA 259

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 99/198 (50%), Gaps = 7/198 (3%)
Query: 480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           E KLG+G FG V+ G       VA+K L   +    E F  E +++ KL+H  LV+    
Sbjct: 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                             LDF   ++ K   L     V +   IA G+ Y+    R+  +
Sbjct: 248 VSEEPIYIVGEYMSKGSLLDFLKGETGK--YLRLPQLVDMAAQIASGMAYVE---RMNYV 302
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRDL+A+NIL+ +++  K++DFG+AR+   +E  ++         + +PE A  G F+IK
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIK 361
Query: 660 SDVFSFGVLLLETLSSKR 677
           SDV+SFG+LL E  +  R
Sbjct: 362 SDVWSFGILLTELTTKGR 379

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 99/198 (50%), Gaps = 7/198 (3%)
Query: 480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           E KLG+G FG V+ G       VA+K L   +    E F  E +++ KL+H  LV+    
Sbjct: 272 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV 330
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                             LDF   ++ K   L     V +   IA G+ Y+    R+  +
Sbjct: 331 VSEEPIYIVTEYMSKGSLLDFLKGETGK--YLRLPQLVDMAAQIASGMAYVE---RMNYV 385
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRDL+A+NIL+ +++  K++DFG+AR+   +E  ++         + +PE A  G F+IK
Sbjct: 386 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIK 444
Query: 660 SDVFSFGVLLLETLSSKR 677
           SDV+SFG+LL E  +  R
Sbjct: 445 SDVWSFGILLTELTTKGR 462

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 100/198 (50%), Gaps = 7/198 (3%)
Query: 480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           E KLG+G FG V+ G       VA+K L   +    E F  E +++ KL+H  LV+    
Sbjct: 13  EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV 71
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                             LDF   ++ K   L     V +   IA G+ Y+    R+  +
Sbjct: 72  VSEEPIXIVTEYMSKGSLLDFLKGETGK--YLRLPQLVDMAAQIASGMAYVE---RMNYV 126
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRDL+A+NIL+ +++  K++DFG+AR+   +E  ++         + +PE A  G F+IK
Sbjct: 127 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF-PIKWTAPEAALYGRFTIK 185
Query: 660 SDVFSFGVLLLETLSSKR 677
           SDV+SFG+LL E  +  R
Sbjct: 186 SDVWSFGILLTELTTKGR 203

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 99/198 (50%), Gaps = 7/198 (3%)
Query: 480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           E KLG+G FG V+ G       VA+K L   +    E F  E +++ KL+H  LV+    
Sbjct: 16  EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV 74
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                             LDF   ++ K   L     V +   IA G+ Y+    R+  +
Sbjct: 75  VSEEPIYIVTEYMSKGSLLDFLKGETGK--YLRLPQLVDMAAQIASGMAYVE---RMNYV 129
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRDL+A+NIL+ +++  K++DFG+AR+   +E  ++         + +PE A  G F+IK
Sbjct: 130 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIK 188
Query: 660 SDVFSFGVLLLETLSSKR 677
           SDV+SFG+LL E  +  R
Sbjct: 189 SDVWSFGILLTELTTKGR 206

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 130/283 (45%), Gaps = 23/283 (8%)
Query: 480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           E KLG+G FG V+ G       VA+K L   +    E F  E +++ KL+H  LV+    
Sbjct: 12  EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV 70
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                             LDF   +  K   L     V +   IA G+ Y+    R+  +
Sbjct: 71  VSEEPIYIVTEYMSKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVE---RMNYV 125
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRDL+A+NIL+ +++  K++DFG+AR+   +E  ++         + +PE A  G F+IK
Sbjct: 126 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGRFTIK 184
Query: 660 SDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLIL 719
           SDV+SFG+LL E L++K    +    +  +L         +R + +  P    E+ + ++
Sbjct: 185 SDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQV------ERGYRMPCPPECPESLHDLM 237
Query: 720 NRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPR-QPA 761
            +       C ++D  +RPT FE +            P+ QP 
Sbjct: 238 CQ-------CWRKDPEERPT-FEYLQAFLEDYFTSTEPQYQPG 272

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 122/274 (44%), Gaps = 31/274 (11%)
Query: 481 NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
            ++G G FG V+ G  LN  +VA+K +  +    +E+F  E +++ KL H  LV+     
Sbjct: 14  QEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIH 600
                       M +  L  +L   T+  L    T + +   + +G+ YL +     VIH
Sbjct: 73  LEQAPICLVTEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 127
Query: 601 RDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT---YGYMSPEYAQQGLFS 657
           RDL A N L+ ++   K+SDFGM R    D+  S T    GT     + SPE      +S
Sbjct: 128 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GTKFPVKWASPEVFSFSRYS 183
Query: 658 IKSDVFSFGVLLLETLSSKR--NTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEAS 715
            KSDV+SFGVL+ E  S  +    + SN+  +  +   + L+K         P L +   
Sbjct: 184 SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK---------PRLASTHV 234
Query: 716 YLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
           Y I+N        C +E   DRP    ++  L  
Sbjct: 235 YQIMNH-------CWRERPEDRPAFSRLLRQLAE 261

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 130/283 (45%), Gaps = 23/283 (8%)
Query: 480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           E KLG+G FG V+ G       VA+K L   +    E F  E +++ KL+H  LV+    
Sbjct: 14  EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV 72
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                             LDF   +  K   L     V +   IA G+ Y+    R+  +
Sbjct: 73  VSEEPIYIVTEYMSKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVE---RMNYV 127
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRDL+A+NIL+ +++  K++DFG+AR+   +E  ++         + +PE A  G F+IK
Sbjct: 128 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIK 186
Query: 660 SDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLIL 719
           SDV+SFG+LL E L++K    +    +  +L         +R + +  P    E+ + ++
Sbjct: 187 SDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQV------ERGYRMPCPPECPESLHDLM 239
Query: 720 NRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPR-QPA 761
            +       C ++D  +RPT FE +            P+ QP 
Sbjct: 240 CQ-------CWRKDPEERPT-FEYLQAFLEDYFTSTEPQYQPG 274

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/314 (26%), Positives = 137/314 (43%), Gaps = 32/314 (10%)
Query: 449 GNKAANSRTRDSWFPMFSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLS 508
           G+       +D+W              +   E KLG+G FG V+ G       VA+K L 
Sbjct: 1   GHMQTQGLAKDAW---------EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK 51
Query: 509 SQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKE 568
             +    E F  E +++ KL+H  LV+                      LDF   +  K 
Sbjct: 52  PGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVCEYMSKGSLLDFLKGEMGK- 109
Query: 569 NLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG 628
             L     V +   IA G+ Y+    R+  +HRDL+A+NIL+ +++  K++DFG+AR+  
Sbjct: 110 -YLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 629 GDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLT 688
            +E  ++         + +PE A  G F+IKSDV+SFG+LL E L++K    +    +  
Sbjct: 166 DNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNRE 223
Query: 689 LLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT 748
           +L         +R + +  P    E+ + ++ +       C ++D  +RPT FE +    
Sbjct: 224 VLDQV------ERGYRMPCPPECPESLHDLMCQ-------CWRKDPEERPT-FEYLQAFL 269
Query: 749 NKTINLPHPR-QPA 761
                   P+ QP 
Sbjct: 270 EDYFTSTEPQYQPG 283

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 133/294 (45%), Gaps = 38/294 (12%)
Query: 474 TANFSTENKLGEGGFGPVYKGRL-LNGQE---VAVKRLSSQSGQGQE-EFKNEIKLIAKL 528
             N S +  +G G FG V  GRL L  ++   VA+K L     + Q  +F  E  ++ + 
Sbjct: 44  ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF 103
Query: 529 QHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKE----NLLGWGTRVRIIEGIA 584
            H N++R                 M N SLD FL     +     L+G      ++ GIA
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG------MLRGIA 157
Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT-Y 643
            G+ YL   S +  +HRDL A NIL++ ++  K+SDFG+AR+   D   + T R      
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPI 214
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNT--DFSNTNSLTLLGHAWDLWKDDR 701
            + SPE      F+  SDV+S+G++L E +S       + SN + +  +         D 
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV---------DE 265
Query: 702 AWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLP 755
            + L  P     A Y ++       L C Q+D  +RP   ++VS+L +K I  P
Sbjct: 266 GYRLPPPMDCPAALYQLM-------LDCWQKDRNNRPKFEQIVSIL-DKLIRNP 311

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/314 (26%), Positives = 137/314 (43%), Gaps = 32/314 (10%)
Query: 449 GNKAANSRTRDSWFPMFSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLS 508
           G+       +D+W              +   E KLG+G FG V+ G       VA+K L 
Sbjct: 1   GHMQTQGLAKDAW---------EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK 51
Query: 509 SQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKE 568
             +    E F  E +++ KL+H  LV+                      LDF   +  K 
Sbjct: 52  PGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGK- 109
Query: 569 NLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG 628
             L     V +   IA G+ Y+    R+  +HRDL+A+NIL+ +++  K++DFG+AR+  
Sbjct: 110 -YLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 629 GDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLT 688
            +E  ++         + +PE A  G F+IKSDV+SFG+LL E L++K    +    +  
Sbjct: 166 DNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNRE 223
Query: 689 LLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT 748
           +L         +R + +  P    E+ + ++ +       C ++D  +RPT FE +    
Sbjct: 224 VLDQV------ERGYRMPCPPECPESLHDLMCQ-------CWRKDPEERPT-FEYLQAFL 269
Query: 749 NKTINLPHPR-QPA 761
                   P+ QP 
Sbjct: 270 EDYFTSTEPQYQPG 283

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 122/274 (44%), Gaps = 31/274 (11%)
Query: 481 NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
            ++G G FG V+ G  LN  +VA+K +  +    +E+F  E +++ KL H  LV+     
Sbjct: 11  QEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIH 600
                       M +  L  +L   T+  L    T + +   + +G+ YL +     VIH
Sbjct: 70  LEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 124
Query: 601 RDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT---YGYMSPEYAQQGLFS 657
           RDL A N L+ ++   K+SDFGM R    D+  S T    GT     + SPE      +S
Sbjct: 125 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GTKFPVKWASPEVFSFSRYS 180
Query: 658 IKSDVFSFGVLLLETLSSKR--NTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEAS 715
            KSDV+SFGVL+ E  S  +    + SN+  +  +   + L+K         P L +   
Sbjct: 181 SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK---------PRLASTHV 231
Query: 716 YLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
           Y I+N        C +E   DRP    ++  L  
Sbjct: 232 YQIMNH-------CWKERPEDRPAFSRLLRQLAE 258

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 122/274 (44%), Gaps = 31/274 (11%)
Query: 481 NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
            ++G G FG V+ G  LN  +VA+K +  +    +E+F  E +++ KL H  LV+     
Sbjct: 13  QEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIH 600
                       M +  L  +L   T+  L    T + +   + +G+ YL +     VIH
Sbjct: 72  LEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 126
Query: 601 RDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT---YGYMSPEYAQQGLFS 657
           RDL A N L+ ++   K+SDFGM R    D+  S T    GT     + SPE      +S
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GTKFPVKWASPEVFSFSRYS 182
Query: 658 IKSDVFSFGVLLLETLSSKR--NTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEAS 715
            KSDV+SFGVL+ E  S  +    + SN+  +  +   + L+K         P L +   
Sbjct: 183 SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK---------PRLASTHV 233
Query: 716 YLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
           Y I+N        C +E   DRP    ++  L  
Sbjct: 234 YQIMNH-------CWKERPEDRPAFSRLLRQLAE 260

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/314 (26%), Positives = 137/314 (43%), Gaps = 32/314 (10%)
Query: 449 GNKAANSRTRDSWFPMFSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLS 508
           G+       +D+W              +   E KLG+G FG V+ G       VA+K L 
Sbjct: 1   GHMQTQGLAKDAW---------EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK 51
Query: 509 SQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKE 568
             +    E F  E +++ KL+H  LV+                      LDF   +  K 
Sbjct: 52  PGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGK- 109
Query: 569 NLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG 628
             L     V +   IA G+ Y+    R+  +HRDL+A+NIL+ +++  K++DFG+AR+  
Sbjct: 110 -YLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 629 GDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLT 688
            +E  ++         + +PE A  G F+IKSDV+SFG+LL E L++K    +    +  
Sbjct: 166 DNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNRE 223
Query: 689 LLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT 748
           +L         +R + +  P    E+ + ++ +       C ++D  +RPT FE +    
Sbjct: 224 VLDQV------ERGYRMPCPPECPESLHDLMCQ-------CWRKDPEERPT-FEYLQAFL 269
Query: 749 NKTINLPHPR-QPA 761
                   P+ QP 
Sbjct: 270 EDYFTSTEPQYQPG 283

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 122/274 (44%), Gaps = 31/274 (11%)
Query: 481 NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
            ++G G FG V+ G  LN  +VA+K +  +    +E+F  E +++ KL H  LV+     
Sbjct: 16  QEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIH 600
                       M +  L  +L   T+  L    T + +   + +G+ YL +     VIH
Sbjct: 75  LEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 129
Query: 601 RDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT---YGYMSPEYAQQGLFS 657
           RDL A N L+ ++   K+SDFGM R    D+  S T    GT     + SPE      +S
Sbjct: 130 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GTKFPVKWASPEVFSFSRYS 185
Query: 658 IKSDVFSFGVLLLETLSSKR--NTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEAS 715
            KSDV+SFGVL+ E  S  +    + SN+  +  +   + L+K         P L +   
Sbjct: 186 SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK---------PRLASTHV 236
Query: 716 YLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
           Y I+N        C +E   DRP    ++  L  
Sbjct: 237 YQIMNH-------CWRERPEDRPAFSRLLRQLAE 263

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/314 (26%), Positives = 137/314 (43%), Gaps = 32/314 (10%)
Query: 449 GNKAANSRTRDSWFPMFSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLS 508
           G+       +D+W              +   E KLG+G FG V+ G       VA+K L 
Sbjct: 1   GHMQTQGLAKDAW---------EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK 51
Query: 509 SQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKE 568
             +    E F  E +++ KL+H  LV+                      LDF   +  K 
Sbjct: 52  PGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGK- 109
Query: 569 NLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG 628
             L     V +   IA G+ Y+    R+  +HRDL+A+NIL+ +++  K++DFG+AR+  
Sbjct: 110 -YLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 629 GDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLT 688
            +E  ++         + +PE A  G F+IKSDV+SFG+LL E L++K    +    +  
Sbjct: 166 DNEXTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNRE 223
Query: 689 LLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT 748
           +L         +R + +  P    E+ + ++ +       C ++D  +RPT FE +    
Sbjct: 224 VLDQV------ERGYRMPCPPECPESLHDLMCQ-------CWRKDPEERPT-FEYLQAFL 269
Query: 749 NKTINLPHPR-QPA 761
                   P+ QP 
Sbjct: 270 EDYFTSTEPQYQPG 283

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/314 (26%), Positives = 137/314 (43%), Gaps = 32/314 (10%)
Query: 449 GNKAANSRTRDSWFPMFSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLS 508
           G+       +D+W              +   E KLG+G FG V+ G       VA+K L 
Sbjct: 1   GHMQTQGLAKDAW---------EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK 51
Query: 509 SQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKE 568
             +    E F  E +++ KL+H  LV+                      LDF   +  K 
Sbjct: 52  PGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVMEYMSKGCLLDFLKGEMGK- 109
Query: 569 NLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG 628
             L     V +   IA G+ Y+    R+  +HRDL+A+NIL+ +++  K++DFG+AR+  
Sbjct: 110 -YLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 629 GDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLT 688
            +E  ++         + +PE A  G F+IKSDV+SFG+LL E L++K    +    +  
Sbjct: 166 DNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNRE 223
Query: 689 LLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT 748
           +L         +R + +  P    E+ + ++ +       C ++D  +RPT FE +    
Sbjct: 224 VLDQV------ERGYRMPCPPECPESLHDLMCQ-------CWRKDPEERPT-FEYLQAFL 269
Query: 749 NKTINLPHPR-QPA 761
                   P+ QP 
Sbjct: 270 EDYFTSTEPQYQPG 283

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/314 (26%), Positives = 137/314 (43%), Gaps = 32/314 (10%)
Query: 449 GNKAANSRTRDSWFPMFSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLS 508
           G+       +D+W              +   E KLG+G FG V+ G       VA+K L 
Sbjct: 1   GHMQTQGLAKDAW---------EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK 51
Query: 509 SQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKE 568
             +    E F  E +++ KL+H  LV+                      LDF   +  K 
Sbjct: 52  PGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGCLLDFLKGEMGK- 109
Query: 569 NLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG 628
             L     V +   IA G+ Y+    R+  +HRDL+A+NIL+ +++  K++DFG+AR+  
Sbjct: 110 -YLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 629 GDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLT 688
            +E  ++         + +PE A  G F+IKSDV+SFG+LL E L++K    +    +  
Sbjct: 166 DNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNRE 223
Query: 689 LLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT 748
           +L         +R + +  P    E+ + ++ +       C ++D  +RPT FE +    
Sbjct: 224 VLDQV------ERGYRMPCPPECPESLHDLMCQ-------CWRKDPEERPT-FEYLQAFL 269
Query: 749 NKTINLPHPR-QPA 761
                   P+ QP 
Sbjct: 270 EDYFTSTEPQYQPG 283

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 90.9 bits (224), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 99/198 (50%), Gaps = 7/198 (3%)
Query: 480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           E KLG+G FG V+ G       VA+K L   +    E F  E +++ KL+H  LV+    
Sbjct: 20  EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV 78
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                             LDF   ++ K   L     V +   IA G+ Y+    R+  +
Sbjct: 79  VSEEPIYIVTEYMNKGSLLDFLKGETGK--YLRLPQLVDMSAQIASGMAYVE---RMNYV 133
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRDL+A+NIL+ +++  K++DFG+AR+   +E  ++         + +PE A  G F+IK
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKF-PIKWTAPEAALYGRFTIK 192
Query: 660 SDVFSFGVLLLETLSSKR 677
           SDV+SFG+LL E  +  R
Sbjct: 193 SDVWSFGILLTELTTKGR 210

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 90.9 bits (224), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/217 (32%), Positives = 102/217 (47%), Gaps = 27/217 (12%)
Query: 475 ANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQS----GQGQEEFKNEIKLIAKLQH 530
           A  + E  +G GGFG VY+   + G EVAVK           Q  E  + E KL A L+H
Sbjct: 7   AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKH 65
Query: 531 RNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDS--TKENLLGWGTRVRIIEGIAQGLL 588
            N++                       L+  L       + L+ W  +      IA+G+ 
Sbjct: 66  PNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQ------IARGMN 119
Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNP--------KISDFGMARIFGGDELQSKTKR-I 639
           YLH  + + +IHRDLK+SNIL+ + +          KI+DFG+AR     E    TK   
Sbjct: 120 YLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHRTTKMSA 174
Query: 640 VGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
            G Y +M+PE  +  +FS  SDV+S+GVLL E L+ +
Sbjct: 175 AGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 90.9 bits (224), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 125/274 (45%), Gaps = 31/274 (11%)
Query: 481 NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
            +LG G FG V+ G      +VAVK L  Q     + F  E  L+ +LQH+ LVR     
Sbjct: 15  ERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 73
Query: 541 XXXXXXXXXXXXMPNKSLDFFL-----FDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSR 595
                       M N SL  FL        T   LL    +      IA+G+ ++ + + 
Sbjct: 74  TQEPIYIITEY-MENGSLVDFLKTPSGIKLTINKLLDMAAQ------IAEGMAFIEERN- 125
Query: 596 LRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGL 655
              IHR+L+A+NIL+   ++ KI+DFG+AR+   +E  ++         + +PE    G 
Sbjct: 126 --YIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGT 182
Query: 656 FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEAS 715
           F+IKSDV+SFG+LL E ++  R      TN   +          +R + ++ P    E  
Sbjct: 183 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-------ERGYRMVRPDNCPEEL 235
Query: 716 YLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
           Y ++        LC +E   DRPT   + S+L +
Sbjct: 236 YQLMR-------LCWKERPEDRPTFDYLRSVLED 262

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 90.9 bits (224), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 99/198 (50%), Gaps = 7/198 (3%)
Query: 480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           E KLG+G FG V+ G       VA+K L   +    E F  E +++ KL+H  LV+    
Sbjct: 20  EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV 78
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                             LDF   ++ K   L     V +   IA G+ Y+    R+  +
Sbjct: 79  VSEEPIYIVTEYMNKGSLLDFLKGETGK--YLRLPQLVDMSAQIASGMAYVE---RMNYV 133
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRDL+A+NIL+ +++  K++DFG+AR+   +E  ++         + +PE A  G F+IK
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIK 192
Query: 660 SDVFSFGVLLLETLSSKR 677
           SDV+SFG+LL E  +  R
Sbjct: 193 SDVWSFGILLTELTTKGR 210

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 134/292 (45%), Gaps = 38/292 (13%)
Query: 476 NFSTENKLGEGGFGPVYKGRL-LNGQE---VAVKRLSSQSGQGQE-EFKNEIKLIAKLQH 530
           N S +  +G G FG V  GRL L  ++   VA+K L     + Q  +F  E  ++ +  H
Sbjct: 46  NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 531 RNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKE----NLLGWGTRVRIIEGIAQG 586
            N++R                 M N SLD FL     +     L+G      ++ GIA G
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVG------MLRGIASG 159
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT-YGY 645
           + YL   S +  +HRDL A NIL++ ++  K+SDFG++R+   D   + T R       +
Sbjct: 160 MKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 216
Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNT--DFSNTNSLTLLGHAWDLWKDDRAW 703
            SPE      F+  SDV+S+G++L E +S       + SN + +  +         D  +
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV---------DEGY 267
Query: 704 ELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLP 755
            L  P     A Y ++       L C Q+D  +RP   ++VS+L +K I  P
Sbjct: 268 RLPPPMDCPAALYQLM-------LDCWQKDRNNRPKFEQIVSIL-DKLIRNP 311

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 130/283 (45%), Gaps = 23/283 (8%)
Query: 480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           E KLG+G FG V+ G       VA+K L   +    E F  E +++ K++H  LV+    
Sbjct: 23  EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKIRHEKLVQLYAV 81
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                             LDF   +  K   L     V +   IA G+ Y+    R+  +
Sbjct: 82  VSEEPIYIVTEYMSKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVE---RMNYV 136
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRDL+A+NIL+ +++  K++DFG+AR+   +E  ++         + +PE A  G F+IK
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIK 195
Query: 660 SDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLIL 719
           SDV+SFG+LL E L++K    +    +  +L         +R + +  P    E+ + ++
Sbjct: 196 SDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQV------ERGYRMPCPPECPESLHDLM 248
Query: 720 NRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPR-QPA 761
            +       C ++D  +RPT FE +            P+ QP 
Sbjct: 249 CQ-------CWRKDPEERPT-FEYLQAFLEDYFTSTEPQYQPG 283

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 128/282 (45%), Gaps = 21/282 (7%)
Query: 480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           E KLG+G FG V+ G       VA+K L        E F  E +++ KL+H  LV+    
Sbjct: 190 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GNMSPEAFLQEAQVMKKLRHEKLVQLYAV 248
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                             LDF   +  K   L     V +   IA G+ Y+    R+  +
Sbjct: 249 VSEEPIYIVTEYMSKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVE---RMNYV 303
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRDL+A+NIL+ +++  K++DFG+ R+   +E  ++         + +PE A  G F+IK
Sbjct: 304 HRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIK 362
Query: 660 SDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLIL 719
           SDV+SFG+LL E L++K    +    +  +L         +R + +  P    E+ + ++
Sbjct: 363 SDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQV------ERGYRMPCPPECPESLHDLM 415
Query: 720 NRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPRQPA 761
            +       C ++D  +RPT   + + L +   +     QP 
Sbjct: 416 CQ-------CWRKDPEERPTFEYLQAFLEDYFTSTEPQXQPG 450

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 90.5 bits (223), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 129/283 (45%), Gaps = 23/283 (8%)
Query: 480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           E KLG+G FG V+ G       VA+K L   +    E F  E +++ KL+H  LV+    
Sbjct: 23  EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                             LDF   +  K   L     V +   IA G+ Y+    R+  +
Sbjct: 82  VSEEPIYIVTEYMSKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVE---RMNYV 136
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRDL A+NIL+ +++  K++DFG+AR+   +E  ++         + +PE A  G F+IK
Sbjct: 137 HRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIK 195
Query: 660 SDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLIL 719
           SDV+SFG+LL E L++K    +    +  +L         +R + +  P    E+ + ++
Sbjct: 196 SDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQV------ERGYRMPCPPECPESLHDLM 248
Query: 720 NRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPR-QPA 761
            +       C ++D  +RPT FE +            P+ QP 
Sbjct: 249 CQ-------CWRKDPEERPT-FEYLQAFLEDYFTSTEPQYQPG 283

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 90.1 bits (222), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 133/294 (45%), Gaps = 38/294 (12%)
Query: 474 TANFSTENKLGEGGFGPVYKGRL-LNGQE---VAVKRLSSQSGQGQE-EFKNEIKLIAKL 528
             N S +  +G G FG V  GRL L  ++   VA+K L     + Q  +F  E  ++ + 
Sbjct: 42  ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF 101
Query: 529 QHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKE----NLLGWGTRVRIIEGIA 584
            H N++R                 M N SLD FL     +     L+G      ++ GIA
Sbjct: 102 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG------MLRGIA 155
Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT-Y 643
            G+ YL   S +  +HRDL A NIL++ ++  K+SDFG++R+   D   + T R      
Sbjct: 156 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 212
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNT--DFSNTNSLTLLGHAWDLWKDDR 701
            + SPE      F+  SDV+S+G++L E +S       + SN + +  +         D 
Sbjct: 213 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV---------DE 263
Query: 702 AWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLP 755
            + L  P     A Y ++       L C Q+D  +RP   ++VS+L +K I  P
Sbjct: 264 GYRLPPPMDCPAALYQLM-------LDCWQKDRNNRPKFEQIVSIL-DKLIRNP 309

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 90.1 bits (222), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 134/294 (45%), Gaps = 38/294 (12%)
Query: 474 TANFSTENKLGEGGFGPVYKGRL-LNGQE---VAVKRLSSQSGQGQE-EFKNEIKLIAKL 528
             N S +  +G G FG V  GRL L  ++   VA+K L     + Q  +F  E  ++ + 
Sbjct: 44  ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF 103
Query: 529 QHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKE----NLLGWGTRVRIIEGIA 584
            H N++R                 M N SLD FL     +     L+G      ++ GIA
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVG------MLRGIA 157
Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT-Y 643
            G+ YL   S +  +HRDL A NIL++ ++  K+SDFG++R+   D   + T R      
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNT--DFSNTNSLTLLGHAWDLWKDDR 701
            + SPE      F+  SDV+S+G++L E +S       + SN + +  +         D 
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV---------DE 265
Query: 702 AWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLP 755
            + L  P     A Y ++       L C Q+D  +RP   ++VS+L +K I  P
Sbjct: 266 GYRLPPPMDCPAALYQLM-------LDCWQKDRNNRPKFEQIVSIL-DKLIRNP 311

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 90.1 bits (222), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 134/292 (45%), Gaps = 38/292 (13%)
Query: 476 NFSTENKLGEGGFGPVYKGRL-LNGQE---VAVKRLSSQSGQGQE-EFKNEIKLIAKLQH 530
           N S +  +G G FG V  GRL L  ++   VA+K L     + Q  +F  E  ++ +  H
Sbjct: 17  NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 531 RNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKE----NLLGWGTRVRIIEGIAQG 586
            N++R                 M N SLD FL     +     L+G      ++ GIA G
Sbjct: 77  PNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVG------MLRGIASG 130
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT-YGY 645
           + YL   S +  +HRDL A NIL++ ++  K+SDFG++R+   D   + T R       +
Sbjct: 131 MKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 187
Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNT--DFSNTNSLTLLGHAWDLWKDDRAW 703
            SPE      F+  SDV+S+G++L E +S       + SN + +  +         D  +
Sbjct: 188 TSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV---------DEGY 238
Query: 704 ELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLP 755
            L  P     A Y ++       L C Q+D  +RP   ++VS+L +K I  P
Sbjct: 239 RLPPPMDCPAALYQLM-------LDCWQKDRNNRPKFEQIVSIL-DKLIRNP 282

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 90.1 bits (222), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 133/292 (45%), Gaps = 38/292 (13%)
Query: 476 NFSTENKLGEGGFGPVYKGRL-LNGQE---VAVKRLSSQSGQGQE-EFKNEIKLIAKLQH 530
           N S +  +G G FG V  GRL L  ++   VA+K L     + Q  +F  E  ++ +  H
Sbjct: 17  NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 531 RNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKE----NLLGWGTRVRIIEGIAQG 586
            N++R                 M N SLD FL     +     L+G      ++ GIA G
Sbjct: 77  PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG------MLRGIASG 130
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT-YGY 645
           + YL   S +  +HRDL A NIL++ ++  K+SDFG++R+   D   + T R       +
Sbjct: 131 MKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 187
Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNT--DFSNTNSLTLLGHAWDLWKDDRAW 703
            SPE      F+  SDV+S+G++L E +S       + SN + +  +         D  +
Sbjct: 188 TSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV---------DEGY 238
Query: 704 ELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLP 755
            L  P     A Y ++       L C Q+D  +RP   ++VS+L +K I  P
Sbjct: 239 RLPPPMDCPAALYQLM-------LDCWQKDRNNRPKFEQIVSIL-DKLIRNP 282

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 90.1 bits (222), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 133/294 (45%), Gaps = 38/294 (12%)
Query: 474 TANFSTENKLGEGGFGPVYKGRL-LNGQE---VAVKRLSSQSGQGQE-EFKNEIKLIAKL 528
             N S +  +G G FG V  GRL L  ++   VA+K L     + Q  +F  E  ++ + 
Sbjct: 44  ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF 103
Query: 529 QHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKE----NLLGWGTRVRIIEGIA 584
            H N++R                 M N SLD FL     +     L+G      ++ GIA
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG------MLRGIA 157
Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT-Y 643
            G+ YL   S +  +HRDL A NIL++ ++  K+SDFG++R+   D   + T R      
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNT--DFSNTNSLTLLGHAWDLWKDDR 701
            + SPE      F+  SDV+S+G++L E +S       + SN + +  +         D 
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV---------DE 265
Query: 702 AWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLP 755
            + L  P     A Y ++       L C Q+D  +RP   ++VS+L +K I  P
Sbjct: 266 GYRLPPPMDCPAALYQLM-------LDCWQKDRNNRPKFEQIVSIL-DKLIRNP 311

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 90.1 bits (222), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 133/294 (45%), Gaps = 38/294 (12%)
Query: 474 TANFSTENKLGEGGFGPVYKGRL-LNGQE---VAVKRLSSQSGQGQE-EFKNEIKLIAKL 528
             N S +  +G G FG V  GRL L  ++   VA+K L     + Q  +F  E  ++ + 
Sbjct: 44  ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF 103
Query: 529 QHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKE----NLLGWGTRVRIIEGIA 584
            H N++R                 M N SLD FL     +     L+G      ++ GIA
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG------MLRGIA 157
Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT-Y 643
            G+ YL   S +  +HRDL A NIL++ ++  K+SDFG++R+   D   + T R      
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNT--DFSNTNSLTLLGHAWDLWKDDR 701
            + SPE      F+  SDV+S+G++L E +S       + SN + +  +         D 
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV---------DE 265
Query: 702 AWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLP 755
            + L  P     A Y ++       L C Q+D  +RP   ++VS+L +K I  P
Sbjct: 266 GYRLPPPMDCPAALYQLM-------LDCWQKDRNNRPKFEQIVSIL-DKLIRNP 311

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 90.1 bits (222), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 133/294 (45%), Gaps = 38/294 (12%)
Query: 474 TANFSTENKLGEGGFGPVYKGRL-LNGQE---VAVKRLSSQSGQGQE-EFKNEIKLIAKL 528
             N S +  +G G FG V  GRL L  ++   VA+K L     + Q  +F  E  ++ + 
Sbjct: 44  ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF 103
Query: 529 QHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKE----NLLGWGTRVRIIEGIA 584
            H N++R                 M N SLD FL     +     L+G      ++ GIA
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG------MLRGIA 157
Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT-Y 643
            G+ YL   S +  +HRDL A NIL++ ++  K+SDFG++R+   D   + T R      
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNT--DFSNTNSLTLLGHAWDLWKDDR 701
            + SPE      F+  SDV+S+G++L E +S       + SN + +  +         D 
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV---------DE 265
Query: 702 AWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLP 755
            + L  P     A Y ++       L C Q+D  +RP   ++VS+L +K I  P
Sbjct: 266 GYRLPPPMDCPAALYQLM-------LDCWQKDRNNRPKFEQIVSIL-DKLIRNP 311

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 90.1 bits (222), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 133/292 (45%), Gaps = 38/292 (13%)
Query: 476 NFSTENKLGEGGFGPVYKGRL-LNGQE---VAVKRLSSQSGQGQE-EFKNEIKLIAKLQH 530
           N S +  +G G FG V  GRL L  ++   VA+K L     + Q  +F  E  ++ +  H
Sbjct: 34  NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 93
Query: 531 RNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKE----NLLGWGTRVRIIEGIAQG 586
            N++R                 M N SLD FL     +     L+G      ++ GIA G
Sbjct: 94  PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG------MLRGIASG 147
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT-YGY 645
           + YL   S +  +HRDL A NIL++ ++  K+SDFG++R+   D   + T R       +
Sbjct: 148 MKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 204
Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNT--DFSNTNSLTLLGHAWDLWKDDRAW 703
            SPE      F+  SDV+S+G++L E +S       + SN + +  +         D  +
Sbjct: 205 TSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV---------DEGY 255
Query: 704 ELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLP 755
            L  P     A Y ++       L C Q+D  +RP   ++VS+L +K I  P
Sbjct: 256 RLPPPMDCPAALYQLM-------LDCWQKDRNNRPKFEQIVSIL-DKLIRNP 299

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 90.1 bits (222), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 133/294 (45%), Gaps = 38/294 (12%)
Query: 474 TANFSTENKLGEGGFGPVYKGRL-LNGQE---VAVKRLSSQSGQGQE-EFKNEIKLIAKL 528
             N S +  +G G FG V  GRL L  ++   VA+K L     + Q  +F  E  ++ + 
Sbjct: 44  ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF 103
Query: 529 QHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKE----NLLGWGTRVRIIEGIA 584
            H N++R                 M N SLD FL     +     L+G      ++ GIA
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG------MLRGIA 157
Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT-Y 643
            G+ YL   S +  +HRDL A NIL++ ++  K+SDFG++R+   D   + T R      
Sbjct: 158 SGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNT--DFSNTNSLTLLGHAWDLWKDDR 701
            + SPE      F+  SDV+S+G++L E +S       + SN + +  +         D 
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV---------DE 265
Query: 702 AWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLP 755
            + L  P     A Y ++       L C Q+D  +RP   ++VS+L +K I  P
Sbjct: 266 GYRLPPPMDCPAALYQLM-------LDCWQKDRNNRPKFEQIVSIL-DKLIRNP 311

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 89.7 bits (221), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 133/294 (45%), Gaps = 38/294 (12%)
Query: 474 TANFSTENKLGEGGFGPVYKGRL-LNGQE---VAVKRLSSQSGQGQE-EFKNEIKLIAKL 528
             N S +  +G G FG V  GRL L  ++   VA+K L     + Q  +F  E  ++ + 
Sbjct: 44  ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF 103
Query: 529 QHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKE----NLLGWGTRVRIIEGIA 584
            H N++R                 M N SLD FL     +     L+G      ++ GIA
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG------MLRGIA 157
Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT-Y 643
            G+ YL   S +  +HRDL A NIL++ ++  K+SDFG++R+   D   + T R      
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNT--DFSNTNSLTLLGHAWDLWKDDR 701
            + SPE      F+  SDV+S+G++L E +S       + SN + +  +         D 
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV---------DE 265
Query: 702 AWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLP 755
            + L  P     A Y ++       L C Q+D  +RP   ++VS+L +K I  P
Sbjct: 266 GYRLPPPMDCPAALYQLM-------LDCWQKDRNNRPKFEQIVSIL-DKLIRNP 311

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 89.7 bits (221), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 129/306 (42%), Gaps = 36/306 (11%)
Query: 447 CKGNKAANSRTRDSW-FPMFSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVK 505
           C  +K      +D+W  P  SL            E KLG G FG V+        +VAVK
Sbjct: 169 CMSSKPQKPWEKDAWEIPRESL----------KLEKKLGAGQFGEVWMATYNKHTKVAVK 218
Query: 506 RLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDS 565
            +   S    E F  E  ++  LQH  LV+                      LDF   D 
Sbjct: 219 TMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDE 277
Query: 566 TKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR 625
             +  L     +     IA+G+ ++ Q +    IHRDL+A+NIL+   +  KI+DFG+AR
Sbjct: 278 GSKQPLP--KLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLAR 332
Query: 626 IFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKR--NTDFSN 683
           +   +E  ++         + +PE    G F+IKSDV+SFG+LL+E ++  R      SN
Sbjct: 333 VIEDNEYTAREGAKF-PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN 391
Query: 684 TNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEV 743
              +  L         +R + +  P    E  Y I+ R       C +    +RPT   +
Sbjct: 392 PEVIRAL---------ERGYRMPRPENCPEELYNIMMR-------CWKNRPEERPTFEYI 435
Query: 744 VSMLTN 749
            S+L +
Sbjct: 436 QSVLDD 441

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 89.7 bits (221), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 132/294 (44%), Gaps = 38/294 (12%)
Query: 474 TANFSTENKLGEGGFGPVYKGRL-LNGQE---VAVKRLSSQSGQGQE-EFKNEIKLIAKL 528
             N S +  +G G FG V  GRL L  ++   VA+K L     + Q  +F  E  ++ + 
Sbjct: 44  ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF 103
Query: 529 QHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKE----NLLGWGTRVRIIEGIA 584
            H N++R                 M N SLD FL     +     L+G      ++ GIA
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG------MLRGIA 157
Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT-Y 643
            G+ YL   S +  +HRDL A NIL++ ++  K+SDFG+ R+   D   + T R      
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPI 214
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNT--DFSNTNSLTLLGHAWDLWKDDR 701
            + SPE      F+  SDV+S+G++L E +S       + SN + +  +         D 
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV---------DE 265
Query: 702 AWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLP 755
            + L  P     A Y ++       L C Q+D  +RP   ++VS+L +K I  P
Sbjct: 266 GYRLPPPMDCPAALYQLM-------LDCWQKDRNNRPKFEQIVSIL-DKLIRNP 311

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 89.4 bits (220), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 106/229 (46%), Gaps = 27/229 (11%)
Query: 467 LASVSAATANFSTENKLGEGGFGPVYKGRLL------NGQEVAVKRLSSQS-GQGQEEFK 519
           L  +S +   F  E  LGE  FG VYKG L         Q VA+K L  ++ G  +EEF+
Sbjct: 3   LKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 60
Query: 520 NEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLF-------------DST 566
           +E  L A+LQH N+V                    +  L  FL              D T
Sbjct: 61  HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 120
Query: 567 KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR- 625
            ++ L     V ++  IA G+ YL   S   V+H+DL   N+L+   +N KISD G+ R 
Sbjct: 121 VKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFRE 177
Query: 626 IFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           ++  D  +     ++    +M+PE    G FSI SD++S+GV+L E  S
Sbjct: 178 VYAADYYKLLGNSLLPI-RWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 89.4 bits (220), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 106/229 (46%), Gaps = 27/229 (11%)
Query: 467 LASVSAATANFSTENKLGEGGFGPVYKGRLL------NGQEVAVKRLSSQS-GQGQEEFK 519
           L  +S +   F  E  LGE  FG VYKG L         Q VA+K L  ++ G  +EEF+
Sbjct: 20  LKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 77
Query: 520 NEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLF-------------DST 566
           +E  L A+LQH N+V                    +  L  FL              D T
Sbjct: 78  HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 137
Query: 567 KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR- 625
            ++ L     V ++  IA G+ YL   S   V+H+DL   N+L+   +N KISD G+ R 
Sbjct: 138 VKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFRE 194
Query: 626 IFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           ++  D  +     ++    +M+PE    G FSI SD++S+GV+L E  S
Sbjct: 195 VYAADYYKLLGNSLLPI-RWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 89.4 bits (220), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 122/273 (44%), Gaps = 29/273 (10%)
Query: 481 NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
            ++G G FG V+ G  LN  +VA+K +   S   +++F  E +++ KL H  LV+     
Sbjct: 33  QEIGSGQFGLVHLGYWLNKDKVAIKTIKEGS-MSEDDFIEEAEVMMKLSHPKLVQLYGVC 91
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIH 600
                       M +  L  +L   T+  L    T + +   + +G+ YL +     VIH
Sbjct: 92  LEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 146
Query: 601 RDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT---YGYMSPEYAQQGLFS 657
           RDL A N L+ ++   K+SDFGM R    D+  S T    GT     + SPE      +S
Sbjct: 147 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GTKFPVKWASPEVFSFSRYS 202
Query: 658 IKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKD-DRAWELIDPTLQNEASY 716
            KSDV+SFGVL+ E  S  +    + +NS        ++ +D    + L  P L +   Y
Sbjct: 203 SKSDVWSFGVLMWEVFSEGKIPYENRSNS--------EVVEDISTGFRLYKPRLASTHVY 254
Query: 717 LILNRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
            I+N        C +E   DRP    ++  L  
Sbjct: 255 QIMNH-------CWKERPEDRPAFSRLLRQLAE 280

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 89.0 bits (219), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 123/274 (44%), Gaps = 31/274 (11%)
Query: 481 NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
            +LG G  G V+ G      +VAVK L  Q     + F  E  L+ +LQH+ LVR     
Sbjct: 19  ERLGAGQAGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 541 XXXXXXXXXXXXMPNKSLDFFL-----FDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSR 595
                       M N SL  FL        T   LL    +      IA+G+ ++ + + 
Sbjct: 78  TQEPIYIITEY-MENGSLVDFLKTPSGIKLTINKLLDMAAQ------IAEGMAFIEERN- 129
Query: 596 LRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGL 655
              IHRDL+A+NIL+   ++ KI+DFG+AR+    E  ++         + +PE    G 
Sbjct: 130 --YIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPI-KWTAPEAINYGT 186
Query: 656 FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEAS 715
           F+IKSDV+SFG+LL E ++  R      TN   +          +R + ++ P    E  
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-------ERGYRMVRPDNCPEEL 239
Query: 716 YLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
           Y ++        LC +E   DRPT   + S+L +
Sbjct: 240 YQLMR-------LCWKERPEDRPTFDYLRSVLED 266

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 89.0 bits (219), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 119/272 (43%), Gaps = 25/272 (9%)
Query: 480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           E KLG G FG V+        +VAVK +   S    E F  E  ++  LQH  LV+    
Sbjct: 20  EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAV 78
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                             LDF   D   +  L     +     IA+G+ ++ Q +    I
Sbjct: 79  VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQRN---YI 133
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRDL+A+NIL+   +  KI+DFG+AR+   +E  ++         + +PE    G F+IK
Sbjct: 134 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPEAINFGSFTIK 192
Query: 660 SDVFSFGVLLLETLSSKR--NTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYL 717
           SDV+SFG+LL+E ++  R      SN   +  L         +R + +  P    E  Y 
Sbjct: 193 SDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL---------ERGYRMPRPENCPEELY- 242
Query: 718 ILNRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
                 N+ + C +    +RPT   + S+L +
Sbjct: 243 ------NIMMRCWKNRPEERPTFEYIQSVLDD 268

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 128/306 (41%), Gaps = 46/306 (15%)
Query: 447 CKGNKAANSRTRDSW-FPMFSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVK 505
           C  +K      +D+W  P  SL            E KLG G FG V+        +VAVK
Sbjct: 163 CMSSKPQKPWEKDAWEIPRESL----------KLEKKLGAGQFGEVWMATYNKHTKVAVK 212
Query: 506 RLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDS 565
            +   S    E F  E  ++  LQH  LV+                      LDF   D 
Sbjct: 213 TMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDE 271
Query: 566 TKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR 625
             +  L     +     IA+G+ ++ Q +    IHRDL+A+NIL+   +  KI+DFG+AR
Sbjct: 272 GSKQPLP--KLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLAR 326
Query: 626 IFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKR--NTDFSN 683
           +  G +   K         + +PE    G F+IKSDV+SFG+LL+E ++  R      SN
Sbjct: 327 V--GAKFPIK---------WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN 375
Query: 684 TNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEV 743
              +  L         +R + +  P    E  Y I+ R       C +    +RPT   +
Sbjct: 376 PEVIRAL---------ERGYRMPRPENCPEELYNIMMR-------CWKNRPEERPTFEYI 419
Query: 744 VSMLTN 749
            S+L +
Sbjct: 420 QSVLDD 425

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 87.0 bits (214), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 127/282 (45%), Gaps = 31/282 (10%)
Query: 483 LGEGGFGPVYKGRLLNGQ-----EVAVKRLSSQSGQGQE-EFKNEIKLIAKLQHRNLVRX 536
           +G G FG VYKG L          VA+K L +   + Q  +F  E  ++ +  H N++R 
Sbjct: 52  IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 537 XXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRL 596
                           M N +LD FL +  K+        V ++ GIA G+ YL   + +
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLRE--KDGEFSVLQLVGMLRGIAAGMKYL---ANM 166
Query: 597 RVIHRDLKASNILLDKDMNPKISDFGMARIFGGD-ELQSKTKRIVGTYGYMSPEYAQQGL 655
             +HRDL A NIL++ ++  K+SDFG++R+   D E    T        + +PE      
Sbjct: 167 NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRK 226
Query: 656 FSIKSDVFSFGVLLLETLSSKRNT--DFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNE 713
           F+  SDV+SFG+++ E ++       + SN   +  +         +  + L  P     
Sbjct: 227 FTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAI---------NDGFRLPTPMDCPS 277
Query: 714 ASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLP 755
           A Y ++       + C Q++ A RP   ++VS+L +K I  P
Sbjct: 278 AIYQLM-------MQCWQQERARRPKFADIVSIL-DKLIRAP 311

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 85.9 bits (211), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 106/215 (49%), Gaps = 11/215 (5%)
Query: 475 ANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
              +   ++G G FG VYKG+      V +  +++ + Q  + FKNE+ ++ K +H N++
Sbjct: 8   GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
                               +          TK  ++     + I    AQG+ YLH  S
Sbjct: 68  LFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS 124
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ-- 652
              +IHRDLK++NI L +D+  KI DFG+A +        + +++ G+  +M+PE  +  
Sbjct: 125 ---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 653 -QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNS 686
            +  +S +SDV++FG++L E ++ +    +SN N+
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINN 214

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 85.9 bits (211), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 106/215 (49%), Gaps = 11/215 (5%)
Query: 475 ANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
              +   ++G G FG VYKG+      V +  +++ + Q  + FKNE+ ++ K +H N++
Sbjct: 8   GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
                               +          TK  ++     + I    AQG+ YLH  S
Sbjct: 68  LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS 124
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ-- 652
              +IHRDLK++NI L +D+  KI DFG+A +        + +++ G+  +M+PE  +  
Sbjct: 125 ---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 653 -QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNS 686
            +  +S +SDV++FG++L E ++ +    +SN N+
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINN 214

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 85.9 bits (211), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 105/214 (49%), Gaps = 11/214 (5%)
Query: 475 ANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
              +   ++G G FG VYKG+      V +  +++ + Q  + FKNE+ ++ K +H N++
Sbjct: 10  GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 69
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
                               +          TK  ++     + I    AQG+ YLH  S
Sbjct: 70  LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS 126
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ-- 652
              +IHRDLK++NI L +D+  KI DFG+A +        + +++ G+  +M+PE  +  
Sbjct: 127 ---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 183
Query: 653 -QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTN 685
            +  +S +SDV++FG++L E ++ +    +SN N
Sbjct: 184 DKNPYSFQSDVYAFGIVLYELMTGQ--LPYSNIN 215

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 85.5 bits (210), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 106/215 (49%), Gaps = 11/215 (5%)
Query: 475 ANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
              +   ++G G FG VYKG+      V +  +++ + Q  + FKNE+ ++ K +H N++
Sbjct: 13  GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
                               +          TK  ++     + I    AQG+ YLH  S
Sbjct: 73  LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS 129
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ-- 652
              +IHRDLK++NI L +D+  KI DFG+A +        + +++ G+  +M+PE  +  
Sbjct: 130 ---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 186
Query: 653 -QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNS 686
            +  +S +SDV++FG++L E ++ +    +SN N+
Sbjct: 187 DKNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINN 219

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 85.5 bits (210), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 105/214 (49%), Gaps = 11/214 (5%)
Query: 475 ANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
              +   ++G G FG VYKG+      V +  +++ + Q  + FKNE+ ++ K +H N++
Sbjct: 13  GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
                               +          TK  ++     + I    AQG+ YLH  S
Sbjct: 73  LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS 129
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ-- 652
              +IHRDLK++NI L +D+  KI DFG+A +        + +++ G+  +M+PE  +  
Sbjct: 130 ---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 186
Query: 653 -QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTN 685
            +  +S +SDV++FG++L E ++ +    +SN N
Sbjct: 187 DKNPYSFQSDVYAFGIVLYELMTGQ--LPYSNIN 218

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 85.5 bits (210), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 95/197 (48%), Gaps = 7/197 (3%)
Query: 481 NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
            +LG G FG V+ G      +VA+K L   +    E F  E +++ KL+H  LV+     
Sbjct: 15  KRLGNGQFGEVWMGTWNGNTKVAIKTLKPGT-MSPESFLEEAQIMKKLKHDKLVQLYAVV 73
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIH 600
                            LDF      +   L     V +   +A G+ Y+    R+  IH
Sbjct: 74  SEEPIYIVTEYMNKGSLLDFL--KDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIH 128
Query: 601 RDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKS 660
           RDL+++NIL+   +  KI+DFG+AR+   +E  ++         + +PE A  G F+IKS
Sbjct: 129 RDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKF-PIKWTAPEAALYGRFTIKS 187
Query: 661 DVFSFGVLLLETLSSKR 677
           DV+SFG+LL E ++  R
Sbjct: 188 DVWSFGILLTELVTKGR 204

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 85.5 bits (210), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 126/284 (44%), Gaps = 33/284 (11%)
Query: 474 TANFSTENKLGEGGFGPVYKGRL-LNGQE---VAVKRLSSQSGQGQE-EFKNEIKLIAKL 528
            +    E  +G G  G V  GRL + GQ    VA+K L +   + Q  +F +E  ++ + 
Sbjct: 48  ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQF 107
Query: 529 QHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLL 588
            H N++R                 M N SLD FL   T +        V ++ G+  G+ 
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL--RTHDGQFTIMQLVGMLRGVGAGMR 165
Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG---- 644
           YL   S L  +HRDL A N+L+D ++  K+SDFG++R+   D   + T     T G    
Sbjct: 166 YL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTT----TGGKIPI 218
Query: 645 -YMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAW 703
            + +PE      FS  SDV+SFGV++ E L+      ++ TN   +          +  +
Sbjct: 219 RWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVIS-------SVEEGY 271
Query: 704 ELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML 747
            L  P     A + ++       L C  +D A RP   ++VS+L
Sbjct: 272 RLPAPMGCPHALHQLM-------LDCWHKDRAQRPRFSQIVSVL 308

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 135/289 (46%), Gaps = 38/289 (13%)
Query: 480 ENKLGEGGFGPVYKGRL-LNGQE---VAVKRL-SSQSGQGQEEFKNEIKLIAKLQHRNLV 534
           E  +G G FG V  GRL + G+    VA+K L +  + + + +F +E  ++ +  H N++
Sbjct: 34  EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 93
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDS----TKENLLGWGTRVRIIEGIAQGLLYL 590
                             M N SLD FL  +    T   L+G      ++ GI  G+ YL
Sbjct: 94  HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVG------MLRGIGSGMKYL 147
Query: 591 HQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT-YGYMSPE 649
              S +  +HRDL A NIL++ ++  K+SDFGM+R+   D   + T R       + +PE
Sbjct: 148 ---SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPE 204
Query: 650 YAQQGLFSIKSDVFSFGVLLLETLSSKRNT--DFSNTNSLTLLGHAWDLWKDDRAWELID 707
                 F+  SDV+S+G+++ E +S       D SN + +  +         +  + L  
Sbjct: 205 AIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI---------EEGYRLPP 255
Query: 708 PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPH 756
           P     A + ++       L C Q++ +DRP   ++V+ML +K I  P+
Sbjct: 256 PMDCPIALHQLM-------LDCWQKERSDRPKFGQIVNML-DKLIRNPN 296

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 126/284 (44%), Gaps = 33/284 (11%)
Query: 474 TANFSTENKLGEGGFGPVYKGRL-LNGQE---VAVKRLSSQSGQGQE-EFKNEIKLIAKL 528
            +    E  +G G  G V  GRL + GQ    VA+K L +   + Q  +F +E  ++ + 
Sbjct: 48  ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQF 107
Query: 529 QHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLL 588
            H N++R                 M N SLD FL   T +        V ++ G+  G+ 
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL--RTHDGQFTIMQLVGMLRGVGAGMR 165
Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG---- 644
           YL   S L  +HRDL A N+L+D ++  K+SDFG++R+   D   + T     T G    
Sbjct: 166 YL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTT----TGGKIPI 218
Query: 645 -YMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAW 703
            + +PE      FS  SDV+SFGV++ E L+      ++ TN   +          +  +
Sbjct: 219 RWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVIS-------SVEEGY 271
Query: 704 ELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML 747
            L  P     A + ++       L C  +D A RP   ++VS+L
Sbjct: 272 RLPAPMGCPHALHQLM-------LDCWHKDRAQRPRFSQIVSVL 308

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 106/215 (49%), Gaps = 11/215 (5%)
Query: 475 ANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
              +   ++G G FG VYKG+      V +  +++ + Q  + FKNE+ ++ K +H N++
Sbjct: 35  GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 94
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
                               +          TK  ++     + I    AQG+ YLH  S
Sbjct: 95  LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS 151
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ-- 652
              +IHRDLK++NI L +D+  KI DFG+A +        + +++ G+  +M+PE  +  
Sbjct: 152 ---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 208
Query: 653 -QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNS 686
            +  +S +SDV++FG++L E ++ +    +SN N+
Sbjct: 209 DKNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINN 241

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 106/215 (49%), Gaps = 11/215 (5%)
Query: 475 ANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
              +   ++G G FG VYKG+      V +  +++ + Q  + FKNE+ ++ K +H N++
Sbjct: 36  GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 95
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
                               +          TK  ++     + I    AQG+ YLH  S
Sbjct: 96  LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS 152
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ-- 652
              +IHRDLK++NI L +D+  KI DFG+A +        + +++ G+  +M+PE  +  
Sbjct: 153 ---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 209
Query: 653 -QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNS 686
            +  +S +SDV++FG++L E ++ +    +SN N+
Sbjct: 210 DKNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINN 242

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/292 (27%), Positives = 135/292 (46%), Gaps = 38/292 (13%)
Query: 477 FSTENKLGEGGFGPVYKGRL-LNGQE---VAVKRL-SSQSGQGQEEFKNEIKLIAKLQHR 531
              E  +G G FG V  GRL + G+    VA+K L +  + + + +F +E  ++ +  H 
Sbjct: 16  IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHP 75
Query: 532 NLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDS----TKENLLGWGTRVRIIEGIAQGL 587
           N++                  M N SLD FL  +    T   L+G      ++ GI  G+
Sbjct: 76  NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVG------MLRGIGSGM 129
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT-YGYM 646
            YL   S +  +HRDL A NIL++ ++  K+SDFGM+R+   D   + T R       + 
Sbjct: 130 KYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWT 186
Query: 647 SPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNT--DFSNTNSLTLLGHAWDLWKDDRAWE 704
           +PE      F+  SDV+S+G+++ E +S       D SN + +  +         +  + 
Sbjct: 187 APEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI---------EEGYR 237
Query: 705 LIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPH 756
           L  P     A + ++       L C Q++ +DRP   ++V+ML +K I  P+
Sbjct: 238 LPPPMDCPIALHQLM-------LDCWQKERSDRPKFGQIVNML-DKLIRNPN 281

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/292 (27%), Positives = 135/292 (46%), Gaps = 38/292 (13%)
Query: 477 FSTENKLGEGGFGPVYKGRL-LNGQE---VAVKRL-SSQSGQGQEEFKNEIKLIAKLQHR 531
              E  +G G FG V  GRL + G+    VA+K L +  + + + +F +E  ++ +  H 
Sbjct: 10  IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHP 69
Query: 532 NLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDS----TKENLLGWGTRVRIIEGIAQGL 587
           N++                  M N SLD FL  +    T   L+G      ++ GI  G+
Sbjct: 70  NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVG------MLRGIGSGM 123
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT-YGYM 646
            YL   S +  +HRDL A NIL++ ++  K+SDFGM+R+   D   + T R       + 
Sbjct: 124 KYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWT 180
Query: 647 SPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNT--DFSNTNSLTLLGHAWDLWKDDRAWE 704
           +PE      F+  SDV+S+G+++ E +S       D SN + +  +         +  + 
Sbjct: 181 APEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI---------EEGYR 231
Query: 705 LIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPH 756
           L  P     A + ++       L C Q++ +DRP   ++V+ML +K I  P+
Sbjct: 232 LPPPMDCPIALHQLM-------LDCWQKERSDRPKFGQIVNML-DKLIRNPN 275

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 106/235 (45%), Gaps = 23/235 (9%)
Query: 482 KLGEGGFGPVYKGR---LLNGQE---VAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR 535
           +LGEG FG V+      LL  Q+   VAVK L   S   +++F+ E +L+  LQH+++VR
Sbjct: 25  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 536 XXXXXXXXXXXXXXXXXMPNKSLDFFLF------------DSTKENLLGWGTRVRIIEGI 583
                            M +  L+ FL             +      LG G  + +   +
Sbjct: 85  FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           A G++YL   + L  +HRDL   N L+ + +  KI DFGM+R     +      R +   
Sbjct: 145 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNT--DFSNTNSLTLLGHAWDL 696
            +M PE      F+ +SDV+SFGV+L E  +  +      SNT ++  +    +L
Sbjct: 202 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGREL 256

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 106/235 (45%), Gaps = 23/235 (9%)
Query: 482 KLGEGGFGPVYKGR---LLNGQE---VAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR 535
           +LGEG FG V+      LL  Q+   VAVK L   S   +++F+ E +L+  LQH+++VR
Sbjct: 19  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 536 XXXXXXXXXXXXXXXXXMPNKSLDFFLF------------DSTKENLLGWGTRVRIIEGI 583
                            M +  L+ FL             +      LG G  + +   +
Sbjct: 79  FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           A G++YL   + L  +HRDL   N L+ + +  KI DFGM+R     +      R +   
Sbjct: 139 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNT--DFSNTNSLTLLGHAWDL 696
            +M PE      F+ +SDV+SFGV+L E  +  +      SNT ++  +    +L
Sbjct: 196 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGREL 250

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 106/235 (45%), Gaps = 23/235 (9%)
Query: 482 KLGEGGFGPVYKGR---LLNGQE---VAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR 535
           +LGEG FG V+      LL  Q+   VAVK L   S   +++F+ E +L+  LQH+++VR
Sbjct: 48  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 536 XXXXXXXXXXXXXXXXXMPNKSLDFFL------------FDSTKENLLGWGTRVRIIEGI 583
                            M +  L+ FL             +      LG G  + +   +
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           A G++YL   + L  +HRDL   N L+ + +  KI DFGM+R     +      R +   
Sbjct: 168 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNT--DFSNTNSLTLLGHAWDL 696
            +M PE      F+ +SDV+SFGV+L E  +  +      SNT ++  +    +L
Sbjct: 225 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGREL 279

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 107/219 (48%), Gaps = 19/219 (8%)
Query: 475 ANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
              +   ++G G FG VYKG+      V +  +++ + Q  + FKNE+ ++ K +H N++
Sbjct: 8   GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
                               +          TK  ++     + I    AQG+ YLH  S
Sbjct: 68  LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS 124
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMA----RIFGGDELQSKTKRIVGTYGYMSPEY 650
              +IHRDLK++NI L +D+  KI DFG+A    R  G  + +    ++ G+  +M+PE 
Sbjct: 125 ---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE----QLSGSILWMAPEV 177
Query: 651 AQ---QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNS 686
            +   +  +S +SDV++FG++L E ++ +    +SN N+
Sbjct: 178 IRMQDKNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINN 214

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 83.2 bits (204), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 128/286 (44%), Gaps = 28/286 (9%)
Query: 477 FSTENKLGEGGFGPVYKGRL-LNGQE---VAVKRLSSQSGQGQE-EFKNEIKLIAKLQHR 531
            + E  +G G FG V  GRL L G+    VA+K L     + Q  +F  E  ++ +  H 
Sbjct: 24  ITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 83
Query: 532 NLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH 591
           N++                  M N SLD FL     +        V ++ GI+ G+ YL 
Sbjct: 84  NIIHLEGVVTKSKPVMIVTEYMENGSLDTFL--KKNDGQFTVIQLVGMLRGISAGMKYL- 140
Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT-YGYMSPEY 650
             S +  +HRDL A NIL++ ++  K+SDFG++R+   D   + T R       + +PE 
Sbjct: 141 --SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEA 198
Query: 651 AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKD-DRAWELIDPT 709
                F+  SDV+S+G+++ E +S      +  TN         D+ K  +  + L  P 
Sbjct: 199 IAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQ--------DVIKAVEEGYRLPSPM 250
Query: 710 LQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLP 755
               A Y ++       L C Q++   RP   E+V+ML +K I  P
Sbjct: 251 DCPAALYQLM-------LDCWQKERNSRPKFDEIVNML-DKLIRNP 288

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 82.8 bits (203), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 107/219 (48%), Gaps = 19/219 (8%)
Query: 475 ANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
              +   ++G G FG VYKG+      V +  +++ + Q  + FKNE+ ++ K +H N++
Sbjct: 28  GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 87
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
                               +          TK  ++     + I    AQG+ YLH  S
Sbjct: 88  LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS 144
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMA----RIFGGDELQSKTKRIVGTYGYMSPEY 650
              +IHRDLK++NI L +D+  KI DFG+A    R  G  + +    ++ G+  +M+PE 
Sbjct: 145 ---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE----QLSGSILWMAPEV 197
Query: 651 AQ---QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNS 686
            +   +  +S +SDV++FG++L E ++ +    +SN N+
Sbjct: 198 IRMQDKNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINN 234

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 82.4 bits (202), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 107/219 (48%), Gaps = 19/219 (8%)
Query: 475 ANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
              +   ++G G FG VYKG+      V +  +++ + Q  + FKNE+ ++ K +H N++
Sbjct: 36  GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 95
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
                               +          TK  ++     + I    AQG+ YLH  S
Sbjct: 96  LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS 152
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMA----RIFGGDELQSKTKRIVGTYGYMSPEY 650
              +IHRDLK++NI L +D+  KI DFG+A    R  G  + +    ++ G+  +M+PE 
Sbjct: 153 ---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE----QLSGSILWMAPEV 205
Query: 651 AQ---QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNS 686
            +   +  +S +SDV++FG++L E ++ +    +SN N+
Sbjct: 206 IRMQDKNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINN 242

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 82.4 bits (202), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 12/213 (5%)
Query: 466 SLAS-VSAATANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQS---GQGQEEFKN 520
           SLA+ +     +F   N LG+G F  VY+   ++ G EVA+K +  ++       +  +N
Sbjct: 1   SLATCIGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQN 60
Query: 521 EIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRII 580
           E+K+  +L+H +++                    N  ++ +L +  K            +
Sbjct: 61  EVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKP--FSENEARHFM 118
Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIV 640
             I  G+LYLH +    ++HRDL  SN+LL ++MN KI+DFG+A          K   + 
Sbjct: 119 HQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP--HEKHYTLC 173
Query: 641 GTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETL 673
           GT  Y+SPE A +    ++SDV+S G +    L
Sbjct: 174 GTPNYISPEIATRSAHGLESDVWSLGCMFYTLL 206

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 82.4 bits (202), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 126/285 (44%), Gaps = 33/285 (11%)
Query: 466 SLASVSAATANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKL 524
           S+ SV      ++   K+G+G  G VY    +  GQEVA+++++ Q    +E   NEI +
Sbjct: 12  SIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILV 71
Query: 525 IAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIA 584
           + + ++ N+V                  +   SL     D   E  +  G    +     
Sbjct: 72  MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECL 127
Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG 644
           Q L +LH     +VIHRD+K+ NILL  D + K++DFG       +  QSK   +VGT  
Sbjct: 128 QALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE--QSKRSXMVGTPY 182
Query: 645 YMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWE 704
           +M+PE   +  +  K D++S G++ +E +  +    + N N L             RA  
Sbjct: 183 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE--PPYLNENPL-------------RALY 227
Query: 705 LI----DPTLQN-EASYLILNRYINVGLLCVQEDAADRPTMFEVV 744
           LI     P LQN E    I   ++N    C++ D   R +  E++
Sbjct: 228 LIATNGTPELQNPEKLSAIFRDFLN---RCLEMDVEKRGSAKELI 269

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 82.4 bits (202), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 105/226 (46%), Gaps = 12/226 (5%)
Query: 466 SLASVSAATANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKL 524
           S+ SV      ++   K+G+G  G VY    +  GQEVA+++++ Q    +E   NEI +
Sbjct: 11  SIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILV 70
Query: 525 IAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIA 584
           + + ++ N+V                  +   SL     D   E  +  G    +     
Sbjct: 71  MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECL 126
Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG 644
           Q L +LH     +VIHRD+K+ NILL  D + K++DFG       +  QSK   +VGT  
Sbjct: 127 QALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE--QSKRSEMVGTPY 181
Query: 645 YMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +M+PE   +  +  K D++S G++ +E +  +    + N N L  L
Sbjct: 182 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE--PPYLNENPLRAL 225

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 105/226 (46%), Gaps = 12/226 (5%)
Query: 466 SLASVSAATANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKL 524
           S+ SV      ++   K+G+G  G VY    +  GQEVA+++++ Q    +E   NEI +
Sbjct: 11  SIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILV 70
Query: 525 IAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIA 584
           + + ++ N+V                  +   SL     D   E  +  G    +     
Sbjct: 71  MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECL 126
Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG 644
           Q L +LH     +VIHRD+K+ NILL  D + K++DFG       +  QSK   +VGT  
Sbjct: 127 QALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE--QSKRSTMVGTPY 181
Query: 645 YMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +M+PE   +  +  K D++S G++ +E +  +    + N N L  L
Sbjct: 182 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE--PPYLNENPLRAL 225

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 81.6 bits (200), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 105/226 (46%), Gaps = 12/226 (5%)
Query: 466 SLASVSAATANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKL 524
           S+ SV      ++   K+G+G  G VY    +  GQEVA+++++ Q    +E   NEI +
Sbjct: 11  SIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILV 70
Query: 525 IAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIA 584
           + + ++ N+V                  +   SL     D   E  +  G    +     
Sbjct: 71  MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECL 126
Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG 644
           Q L +LH     +VIHRD+K+ NILL  D + K++DFG       +  QSK   +VGT  
Sbjct: 127 QALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE--QSKRSXMVGTPY 181
Query: 645 YMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +M+PE   +  +  K D++S G++ +E +  +    + N N L  L
Sbjct: 182 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE--PPYLNENPLRAL 225

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 102/203 (50%), Gaps = 22/203 (10%)
Query: 483 LGEGGFGPVYKGRLLNGQE-----VAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRX 536
           LG G FG VYKG  +   E     VA+K L+  +G +   EF +E  ++A + H +LVR 
Sbjct: 23  LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 537 XXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKEN-----LLGWGTRVRIIEGIAQGLLYLH 591
                           MP+  L  ++ +  K+N     LL W  +      IA+G++YL 
Sbjct: 83  LGVCLSPTIQLVTQL-MPHGCLLEYVHEH-KDNIGSQLLLNWCVQ------IAKGMMYLE 134
Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYA 651
           +    R++HRDL A N+L+    + KI+DFG+AR+  GDE +           +M+ E  
Sbjct: 135 ER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 191
Query: 652 QQGLFSIKSDVFSFGVLLLETLS 674
               F+ +SDV+S+GV + E ++
Sbjct: 192 HYRKFTHQSDVWSYGVTIWELMT 214

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 122/270 (45%), Gaps = 33/270 (12%)
Query: 477 FSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKN---EIKLIAKLQHRN 532
           FS   ++G G FG VY  R + N + VA+K++S    Q  E++++   E++ + KL+H N
Sbjct: 56  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
            ++                     + D        +  L       +  G  QGL YLH 
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLL---EVHKKPLQEVEIAAVTHGALQGLAYLHS 172
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEY-- 650
           ++   +IHRD+KA NILL +    K+ DFG A I       +     VGT  +M+PE   
Sbjct: 173 HN---MIHRDVKAGNILLSEPGLVKLGDFGSASIM------APANXFVGTPYWMAPEVIL 223
Query: 651 -AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT 709
              +G +  K DV+S G+  +E   ++R     N N+++ L H   + +++       P 
Sbjct: 224 AMDEGQYDGKVDVWSLGITCIEL--AERKPPLFNMNAMSALYH---IAQNE------SPA 272
Query: 710 LQNEASYLILNRYINVGLLCVQEDAADRPT 739
           LQ+         +++    C+Q+   DRPT
Sbjct: 273 LQSGHWSEYFRNFVDS---CLQKIPQDRPT 299

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 122/270 (45%), Gaps = 33/270 (12%)
Query: 477 FSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKN---EIKLIAKLQHRN 532
           FS   ++G G FG VY  R + N + VA+K++S    Q  E++++   E++ + KL+H N
Sbjct: 17  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
            ++                     + D        +  L       +  G  QGL YLH 
Sbjct: 77  TIQYRGCYLREHTAWLVMEYCLGSASDLL---EVHKKPLQEVEIAAVTHGALQGLAYLHS 133
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEY-- 650
           ++   +IHRD+KA NILL +    K+ DFG A I       +     VGT  +M+PE   
Sbjct: 134 HN---MIHRDVKAGNILLSEPGLVKLGDFGSASIM------APANXFVGTPYWMAPEVIL 184
Query: 651 -AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT 709
              +G +  K DV+S G+  +E   ++R     N N+++ L H   + +++       P 
Sbjct: 185 AMDEGQYDGKVDVWSLGITCIEL--AERKPPLFNMNAMSALYH---IAQNE------SPA 233
Query: 710 LQNEASYLILNRYINVGLLCVQEDAADRPT 739
           LQ+         +++    C+Q+   DRPT
Sbjct: 234 LQSGHWSEYFRNFVDS---CLQKIPQDRPT 260

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 11/214 (5%)
Query: 475 ANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
              +   ++G G FG VYKG+      V +  +++ + Q  + FKNE+ ++ K +H N++
Sbjct: 12  GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 71
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
                                 SL   L  S  E        + I    A+G+ YLH  S
Sbjct: 72  -LFMGYSTKPQLAIVTQWCEGSSLYHHLHAS--ETKFEMKKLIDIARQTARGMDYLHAKS 128
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQ- 653
              +IHRDLK++NI L +D   KI DFG+A +        + +++ G+  +M+PE  +  
Sbjct: 129 ---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 185
Query: 654 --GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTN 685
               +S +SDV++FG++L E ++ +    +SN N
Sbjct: 186 DSNPYSFQSDVYAFGIVLYELMTGQ--LPYSNIN 217

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 102/203 (50%), Gaps = 22/203 (10%)
Query: 483 LGEGGFGPVYKGRLLNGQE-----VAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRX 536
           LG G FG VYKG  +   E     VA+K L+  +G +   EF +E  ++A + H +LVR 
Sbjct: 46  LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 537 XXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKEN-----LLGWGTRVRIIEGIAQGLLYLH 591
                           MP+  L  ++ +  K+N     LL W  +      IA+G++YL 
Sbjct: 106 LGVCLSPTIQLVTQL-MPHGCLLEYVHEH-KDNIGSQLLLNWCVQ------IAKGMMYLE 157
Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYA 651
           +    R++HRDL A N+L+    + KI+DFG+AR+  GDE +           +M+ E  
Sbjct: 158 ER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 214
Query: 652 QQGLFSIKSDVFSFGVLLLETLS 674
               F+ +SDV+S+GV + E ++
Sbjct: 215 HYRKFTHQSDVWSYGVTIWELMT 237

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 80.9 bits (198), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 118/270 (43%), Gaps = 31/270 (11%)
Query: 481 NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
            +LG G FG V  G+     +VAVK +   S   ++EF  E + + KL H  LV+     
Sbjct: 14  KELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYL--HQYSRLRV 598
                       + N  L  +L    K   L     + +   + +G+ +L  HQ+     
Sbjct: 73  SKEYPIYIVTEYISNGCLLNYLRSHGKG--LEPSQLLEMCYDVCEGMAFLESHQF----- 125
Query: 599 IHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT---YGYMSPEYAQQGL 655
           IHRDL A N L+D+D+  K+SDFGM R    D+  S     VGT     + +PE      
Sbjct: 126 IHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS----VGTKFPVKWSAPEVFHYFK 181
Query: 656 FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEAS 715
           +S KSDV++FG+L+ E  S  +      TNS  +L       K  +   L  P L ++  
Sbjct: 182 YSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVL-------KVSQGHRLYRPHLASDTI 234
Query: 716 YLILNRYINVGLLCVQEDAADRPTMFEVVS 745
           Y I+         C  E    RPT  +++S
Sbjct: 235 YQIMYS-------CWHELPEKRPTFQQLLS 257

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 80.9 bits (198), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 140/305 (45%), Gaps = 39/305 (12%)
Query: 460 SWFPMFSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQE-VAVKRLSSQSGQGQ--- 515
           S FP   L ++  A      E ++G+GGFG V+KGRL+  +  VA+K L     +G+   
Sbjct: 6   SEFPKSRLPTL--ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEM 63
Query: 516 ----EEFKNEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLL 571
               +EF+ E+ +++ L H N+V+                 +P   L   L D  K + +
Sbjct: 64  IEKFQEFQREVFIMSNLNHPNIVK--LYGLMHNPPRMVMEFVPCGDLYHRLLD--KAHPI 119
Query: 572 GWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDK-DMN----PKISDFGMARI 626
            W  ++R++  IA G+ Y+ Q     ++HRDL++ NI L   D N     K++DFG+++ 
Sbjct: 120 KWSVKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ- 177
Query: 627 FGGDELQSKTKRIVGTYGYMSPEY--AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNT 684
               +       ++G + +M+PE   A++  ++ K+D +SF ++L   L+ +   D  + 
Sbjct: 178 ----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSY 233
Query: 685 NSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVV 744
             +  +    +        E + PT+  +       R  NV  LC   D   RP    +V
Sbjct: 234 GKIKFINMIRE--------EGLRPTIPEDCP----PRLRNVIELCWSGDPKKRPHFSYIV 281
Query: 745 SMLTN 749
             L+ 
Sbjct: 282 KELSE 286

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 81/305 (26%), Positives = 131/305 (42%), Gaps = 39/305 (12%)
Query: 482 KLGEGGFGPVYKGR---LLNGQ---EVAVKRLS-SQSGQGQEEFKNEIKLIAKLQHRNLV 534
           +LG+G FG VY+G    ++ G+    VAVK ++ S S + + EF NE  ++      ++V
Sbjct: 24  ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFL--FDSTKENLLG-----WGTRVRIIEGIAQGL 587
           R                 M +  L  +L       EN  G         +++   IA G+
Sbjct: 84  RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
            YL+     + +HRDL A N ++  D   KI DFGM R     +   K  + +    +M+
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 648 PEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWEL 705
           PE  + G+F+  SD++SFGV+L E  +L+ +     SN   L  +     L + D   E 
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE- 259
Query: 706 IDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPRQPAFSSI 765
                          R  ++  +C Q +   RPT  E+V++L +      HP  P  S  
Sbjct: 260 ---------------RVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL----HPSFPEVSFF 300
Query: 766 RGLKN 770
              +N
Sbjct: 301 HSEEN 305

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 80.5 bits (197), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 128/287 (44%), Gaps = 32/287 (11%)
Query: 480 ENKLGEGGFGPVYKGRL-LNGQE---VAVKRLSSQSGQGQE-EFKNEIKLIAKLQHRNLV 534
           E  +G G FG V  G L L G+    VA+K L S   + Q  +F +E  ++ +  H N++
Sbjct: 38  EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 97
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
                             M N SLD FL     +        V ++ GIA G+ YL   +
Sbjct: 98  HLEGVVTKSTPVMIITEFMENGSLDSFL--RQNDGQFTVIQLVGMLRGIAAGMKYL---A 152
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG---TYGYMSPEYA 651
            +  +HRDL A NIL++ ++  K+SDFG++R    D         +G      + +PE  
Sbjct: 153 DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI 212
Query: 652 QQGLFSIKSDVFSFGVLLLETLSSKRNT--DFSNTNSLTLLGHAWDLWKDDRAWELIDPT 709
           Q   F+  SDV+S+G+++ E +S       D +N + +  +         ++ + L  P 
Sbjct: 213 QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAI---------EQDYRLPPPM 263
Query: 710 LQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPH 756
               A + ++       L C Q+D   RP   ++V+ L +K I  P+
Sbjct: 264 DCPSALHQLM-------LDCWQKDRNHRPKFGQIVNTL-DKMIRNPN 302

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 81/305 (26%), Positives = 131/305 (42%), Gaps = 39/305 (12%)
Query: 482 KLGEGGFGPVYKGR---LLNGQ---EVAVKRLS-SQSGQGQEEFKNEIKLIAKLQHRNLV 534
           +LG+G FG VY+G    ++ G+    VAVK ++ S S + + EF NE  ++      ++V
Sbjct: 21  ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 80
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFL--FDSTKENLLG-----WGTRVRIIEGIAQGL 587
           R                 M +  L  +L       EN  G         +++   IA G+
Sbjct: 81  RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
            YL+     + +HRDL A N ++  D   KI DFGM R     +   K  + +    +M+
Sbjct: 141 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 197
Query: 648 PEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWEL 705
           PE  + G+F+  SD++SFGV+L E  +L+ +     SN   L  +     L + D   E 
Sbjct: 198 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE- 256
Query: 706 IDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPRQPAFSSI 765
                          R  ++  +C Q +   RPT  E+V++L +      HP  P  S  
Sbjct: 257 ---------------RVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL----HPSFPEVSFF 297
Query: 766 RGLKN 770
              +N
Sbjct: 298 HSEEN 302

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 80.1 bits (196), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 81/305 (26%), Positives = 131/305 (42%), Gaps = 39/305 (12%)
Query: 482 KLGEGGFGPVYKGR---LLNGQ---EVAVKRLS-SQSGQGQEEFKNEIKLIAKLQHRNLV 534
           +LG+G FG VY+G    ++ G+    VAVK ++ S S + + EF NE  ++      ++V
Sbjct: 24  ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFL--FDSTKENLLG-----WGTRVRIIEGIAQGL 587
           R                 M +  L  +L       EN  G         +++   IA G+
Sbjct: 84  RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
            YL+     + +HRDL A N ++  D   KI DFGM R     +   K  + +    +M+
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 648 PEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWEL 705
           PE  + G+F+  SD++SFGV+L E  +L+ +     SN   L  +     L + D   E 
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE- 259
Query: 706 IDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPRQPAFSSI 765
                          R  ++  +C Q +   RPT  E+V++L +      HP  P  S  
Sbjct: 260 ---------------RVTDLMRMCWQFNPNMRPTFLEIVNLLKDDL----HPSFPEVSFF 300
Query: 766 RGLKN 770
              +N
Sbjct: 301 HSEEN 305

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 80.1 bits (196), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 127/289 (43%), Gaps = 38/289 (13%)
Query: 480 ENKLGEGGFGPVYKGRL-LNGQE---VAVKRLSSQSGQGQE-EFKNEIKLIAKLQHRNLV 534
           E  +G G FG V +GRL   G++   VA+K L     + Q  EF +E  ++ + +H N++
Sbjct: 19  EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
           R                 M N +LD FL     +        V ++ GIA G+ YL + S
Sbjct: 79  RLEGVVTNSMPVMILTEFMENGALDSFL--RLNDGQFTVIQLVGMLRGIASGMRYLAEMS 136
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG------YMSP 648
               +HRDL A NIL++ ++  K+SDFG++R     E  S       + G      + +P
Sbjct: 137 ---YVHRDLAARNILVNSNLVCKVSDFGLSRFL---EENSSDPTYTSSLGGKIPIRWTAP 190
Query: 649 EYAQQGLFSIKSDVFSFGVLLLETLS--SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELI 706
           E      F+  SD +S+G+++ E +S   +   D SN + +  +   + L          
Sbjct: 191 EAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPP-------- 242
Query: 707 DPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLP 755
            P        L+L+        C Q+D   RP   +VVS L +K I  P
Sbjct: 243 PPDCPTSLHQLMLD--------CWQKDRNARPRFPQVVSAL-DKMIRNP 282

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 79.7 bits (195), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 139/305 (45%), Gaps = 39/305 (12%)
Query: 460 SWFPMFSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQE-VAVKRLSSQSGQGQ--- 515
           S FP   L ++  A      E ++G+GGFG V+KGRL+  +  VA+K L     +G+   
Sbjct: 6   SEFPKSRLPTL--ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEM 63
Query: 516 ----EEFKNEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLL 571
               +EF+ E+ +++ L H N+V+                 +P   L   L D  K + +
Sbjct: 64  IEKFQEFQREVFIMSNLNHPNIVK--LYGLMHNPPRMVMEFVPCGDLYHRLLD--KAHPI 119
Query: 572 GWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDK-DMN----PKISDFGMARI 626
            W  ++R++  IA G+ Y+ Q     ++HRDL++ NI L   D N     K++DFG ++ 
Sbjct: 120 KWSVKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ- 177
Query: 627 FGGDELQSKTKRIVGTYGYMSPEY--AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNT 684
               +       ++G + +M+PE   A++  ++ K+D +SF ++L   L+ +   D  + 
Sbjct: 178 ----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSY 233
Query: 685 NSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVV 744
             +  +    +        E + PT+  +       R  NV  LC   D   RP    +V
Sbjct: 234 GKIKFINMIRE--------EGLRPTIPEDCP----PRLRNVIELCWSGDPKKRPHFSYIV 281
Query: 745 SMLTN 749
             L+ 
Sbjct: 282 KELSE 286

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 79.7 bits (195), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 77/290 (26%), Positives = 131/290 (45%), Gaps = 40/290 (13%)
Query: 480 ENKLGEGGFGPVYKGRL-LNGQE---VAVKRLSSQSGQGQE-EFKNEIKLIAKLQHRNLV 534
           E  +G G FG V  GRL L G+    VA+K L     + Q  +F  E  ++ +  H N+V
Sbjct: 48  ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
                             M N +LD FL     +        V ++ GIA G+ YL   +
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFL--RKHDGQFTVIQLVGMLRGIAAGMRYL---A 162
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG------YMSP 648
            +  +HRDL A NIL++ ++  K+SDFG++R+     ++   + +  T G      + +P
Sbjct: 163 DMGYVHRDLAARNILVNSNLVCKVSDFGLSRV-----IEDDPEAVYTTTGGKIPVRWTAP 217
Query: 649 EYAQQGLFSIKSDVFSFGVLLLETLSSKRNT--DFSNTNSLTLLGHAWDLWKDDRAWELI 706
           E  Q   F+  SDV+S+G+++ E +S       D SN + +  +         +  + L 
Sbjct: 218 EAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI---------EEGYRLP 268
Query: 707 DPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPH 756
            P       + ++       L C Q++ A+RP   ++V +L +K I  P+
Sbjct: 269 APMDCPAGLHQLM-------LDCWQKERAERPKFEQIVGIL-DKMIRNPN 310

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 79.7 bits (195), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 126/286 (44%), Gaps = 32/286 (11%)
Query: 480 ENKLGEGGFGPVYKGRL-LNGQE---VAVKRLSSQSGQGQE-EFKNEIKLIAKLQHRNLV 534
           E  +G G FG V +GRL   G++   VA+K L     + Q  EF +E  ++ + +H N++
Sbjct: 21  EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
           R                 M N +LD FL     +        V ++ GIA G+ YL + S
Sbjct: 81  RLEGVVTNSMPVMILTEFMENGALDSFL--RLNDGQFTVIQLVGMLRGIASGMRYLAEMS 138
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG---TYGYMSPEYA 651
               +HRDL A NIL++ ++  K+SDFG++R    +         +G      + +PE  
Sbjct: 139 ---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAI 195
Query: 652 QQGLFSIKSDVFSFGVLLLETLS--SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT 709
               F+  SD +S+G+++ E +S   +   D SN + +  +   + L           P 
Sbjct: 196 AFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPP--------PPD 247
Query: 710 LQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLP 755
                  L+L+        C Q+D   RP   +VVS L +K I  P
Sbjct: 248 CPTSLHQLMLD--------CWQKDRNARPRFPQVVSAL-DKMIRNP 284

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 79.7 bits (195), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 134/306 (43%), Gaps = 41/306 (13%)
Query: 482 KLGEGGFGPVYKGR---LLNGQ---EVAVKRLS-SQSGQGQEEFKNEIKLIAKLQHRNLV 534
           +LG+G FG VY+G    ++ G+    VAVK ++ S S + + EF NE  ++      ++V
Sbjct: 24  ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFL--FDSTKENLLG-----WGTRVRIIEGIAQGL 587
           R                 M +  L  +L       EN  G         +++   IA G+
Sbjct: 84  RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGDELQSKTKRIVGTYGYM 646
            YL+     + +HRDL A N ++  D   KI DFGM R I+  D  +   K ++    +M
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-WM 199
Query: 647 SPEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWE 704
           +PE  + G+F+  SD++SFGV+L E  +L+ +     SN   L  +     L + D   E
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE 259
Query: 705 LIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPRQPAFSS 764
                           R  ++  +C Q +   RPT  E+V++L +      HP  P  S 
Sbjct: 260 ----------------RVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL----HPSFPEVSF 299
Query: 765 IRGLKN 770
               +N
Sbjct: 300 FHSEEN 305

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 134/306 (43%), Gaps = 41/306 (13%)
Query: 482 KLGEGGFGPVYKGR---LLNGQ---EVAVKRLS-SQSGQGQEEFKNEIKLIAKLQHRNLV 534
           +LG+G FG VY+G    ++ G+    VAVK ++ S S + + EF NE  ++      ++V
Sbjct: 23  ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFL--FDSTKENLLG-----WGTRVRIIEGIAQGL 587
           R                 M +  L  +L       EN  G         +++   IA G+
Sbjct: 83  RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGDELQSKTKRIVGTYGYM 646
            YL+     + +HRDL A N ++  D   KI DFGM R I+  D  +   K ++    +M
Sbjct: 143 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-WM 198
Query: 647 SPEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWE 704
           +PE  + G+F+  SD++SFGV+L E  +L+ +     SN   L  +     L + D   E
Sbjct: 199 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE 258
Query: 705 LIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPRQPAFSS 764
                           R  ++  +C Q +   RPT  E+V++L +      HP  P  S 
Sbjct: 259 ----------------RVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL----HPSFPEVSF 298
Query: 765 IRGLKN 770
               +N
Sbjct: 299 FHSEEN 304

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 125/285 (43%), Gaps = 33/285 (11%)
Query: 467 LASVSAATANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLI 525
           + SV      ++   K+G+G  G VY    +  GQEVA+++++ Q    +E   NEI ++
Sbjct: 13  IVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVM 72
Query: 526 AKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQ 585
            + ++ N+V                  +   SL     D   E  +  G    +     Q
Sbjct: 73  RENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQ 128
Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
            L +LH     +VIHR++K+ NILL  D + K++DFG       +  QSK   +VGT  +
Sbjct: 129 ALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPE--QSKRSTMVGTPYW 183
Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWEL 705
           M+PE   +  +  K D++S G++ +E +  +    + N N L             RA  L
Sbjct: 184 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE--PPYLNENPL-------------RALYL 228
Query: 706 I----DPTLQN-EASYLILNRYINVGLLCVQEDAADRPTMFEVVS 745
           I     P LQN E    I   ++N    C++ D   R +  E++ 
Sbjct: 229 IATNGTPELQNPEKLSAIFRDFLN---RCLEMDVEKRGSAKELIQ 270

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 116/274 (42%), Gaps = 32/274 (11%)
Query: 475 ANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSS---QSGQGQEEFKNEIKLIAKLQH 530
           ANF  E K+G G F  VY+   LL+G  VA+K++        + + +   EI L+ +L H
Sbjct: 32  ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91
Query: 531 RNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLL-----GWGTRVRIIEGIAQ 585
            N+++                      L   +    K+  L      W   V++   +  
Sbjct: 92  PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALE- 150
Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
                H +SR RV+HRD+K +N+ +      K+ D G+ R F      + +  +VGT  Y
Sbjct: 151 -----HMHSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGTPYY 202
Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWEL 705
           MSPE   +  ++ KSD++S G LL E  + +              G   +L+   +  E 
Sbjct: 203 MSPERIHENGYNFKSDIWSLGCLLYEMAALQS----------PFYGDKMNLYSLCKKIEQ 252
Query: 706 ID-PTLQNEASYLILNRYINVGLLCVQEDAADRP 738
            D P L ++     L + +N   +C+  D   RP
Sbjct: 253 CDYPPLPSDHYSEELRQLVN---MCINPDPEKRP 283

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/305 (26%), Positives = 130/305 (42%), Gaps = 39/305 (12%)
Query: 482 KLGEGGFGPVYKGR---LLNGQ---EVAVKRLS-SQSGQGQEEFKNEIKLIAKLQHRNLV 534
           +LG+G FG VY+G    ++ G+    VAVK ++ S S + + EF NE  ++      ++V
Sbjct: 24  ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFL--FDSTKENLLG-----WGTRVRIIEGIAQGL 587
           R                 M +  L  +L       EN  G         +++   IA G+
Sbjct: 84  RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
            YL+     + +HRDL A N ++  D   KI DFGM R         K  + +    +M+
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMA 200
Query: 648 PEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWEL 705
           PE  + G+F+  SD++SFGV+L E  +L+ +     SN   L  +     L + D   E 
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE- 259
Query: 706 IDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPRQPAFSSI 765
                          R  ++  +C Q +   RPT  E+V++L +      HP  P  S  
Sbjct: 260 ---------------RVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL----HPSFPEVSFF 300
Query: 766 RGLKN 770
              +N
Sbjct: 301 HSEEN 305

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/294 (24%), Positives = 130/294 (44%), Gaps = 40/294 (13%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR 535
               E  +G G FG V K +    ++VA+K++ S+S +  + F  E++ ++++ H N+V+
Sbjct: 10  EIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVK 66
Query: 536 XXXXXXXXXXXXXXXXXMPNKSLDFFLFDS------TKENLLGWGTRVRIIEGIAQGLLY 589
                                SL   L  +      T  + + W  +       +QG+ Y
Sbjct: 67  LYGACLNPVCLVMEYAE--GGSLYNVLHGAEPLPYYTAAHAMSWCLQC------SQGVAY 118
Query: 590 LHQYSRLRVIHRDLKASNILLDKDMNP-KISDFGMARIFGGDELQSKTKRIVGTYGYMSP 648
           LH      +IHRDLK  N+LL       KI DFG A      ++Q+      G+  +M+P
Sbjct: 119 LHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWMAP 173
Query: 649 EYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP 708
           E  +   +S K DVFS+G++L E ++ ++  D     +  ++   W +    R      P
Sbjct: 174 EVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM---WAVHNGTRP-----P 225
Query: 709 TLQNEASYL--ILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPRQP 760
            ++N    +  ++ R       C  +D + RP+M E+V ++T+     P   +P
Sbjct: 226 LIKNLPKPIESLMTR-------CWSKDPSQRPSMEEIVKIMTHLMRYFPGADEP 272

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/294 (24%), Positives = 130/294 (44%), Gaps = 40/294 (13%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR 535
               E  +G G FG V K +    ++VA+K++ S+S +  + F  E++ ++++ H N+V+
Sbjct: 9   EIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVK 65
Query: 536 XXXXXXXXXXXXXXXXXMPNKSLDFFLFDS------TKENLLGWGTRVRIIEGIAQGLLY 589
                                SL   L  +      T  + + W  +       +QG+ Y
Sbjct: 66  LYGACLNPVCLVMEYAE--GGSLYNVLHGAEPLPYYTAAHAMSWCLQC------SQGVAY 117
Query: 590 LHQYSRLRVIHRDLKASNILLDKDMNP-KISDFGMARIFGGDELQSKTKRIVGTYGYMSP 648
           LH      +IHRDLK  N+LL       KI DFG A      ++Q+      G+  +M+P
Sbjct: 118 LHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWMAP 172
Query: 649 EYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP 708
           E  +   +S K DVFS+G++L E ++ ++  D     +  ++   W +    R      P
Sbjct: 173 EVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM---WAVHNGTRP-----P 224
Query: 709 TLQNEASYL--ILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPRQP 760
            ++N    +  ++ R       C  +D + RP+M E+V ++T+     P   +P
Sbjct: 225 LIKNLPKPIESLMTR-------CWSKDPSQRPSMEEIVKIMTHLMRYFPGADEP 271

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 19/218 (8%)
Query: 475 ANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
              +   ++G G FG VYKG+      V +  +++ + Q  + FKNE+ ++ K +H N++
Sbjct: 24  GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 83
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
                                 SL   L  S  E        + I    A+G+ YLH  S
Sbjct: 84  -LFMGYSTAPQLAIVTQWCEGSSLYHHLHAS--ETKFEMKKLIDIARQTARGMDYLHAKS 140
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMA----RIFGGDELQSKTKRIVGTYGYMSPEY 650
              +IHRDLK++NI L +D   KI DFG+A    R  G  + +    ++ G+  +M+PE 
Sbjct: 141 ---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE----QLSGSILWMAPEV 193
Query: 651 AQQ---GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTN 685
            +      +S +SDV++FG++L E ++ +    +SN N
Sbjct: 194 IRMQDSNPYSFQSDVYAFGIVLYELMTGQ--LPYSNIN 229

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 93/196 (47%), Gaps = 10/196 (5%)
Query: 482 KLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
           K+GEG  G V   R  + G++VAVK +  +  Q +E   NE+ ++   QH N+V      
Sbjct: 52  KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIH 600
                       +   +L     D   +  L       + E + Q L YLH      VIH
Sbjct: 112 LVGEELWVLMEFLQGGALT----DIVSQVRLNEEQIATVCEAVLQALAYLHAQG---VIH 164
Query: 601 RDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKS 660
           RD+K+ +ILL  D   K+SDFG       D    K K +VGT  +M+PE   + L++ + 
Sbjct: 165 RDIKSDSILLTLDGRVKLSDFGFCAQISKD--VPKRKXLVGTPYWMAPEVISRSLYATEV 222
Query: 661 DVFSFGVLLLETLSSK 676
           D++S G++++E +  +
Sbjct: 223 DIWSLGIMVIEMVDGE 238

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 11/210 (5%)
Query: 470 VSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQ 529
           + A+    ST  ++G G FG VYKG+      V + ++   + +  + F+NE+ ++ K +
Sbjct: 33  IEASEVMLST--RIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTR 90
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLY 589
           H N++                    +          TK  +      + I    AQG+ Y
Sbjct: 91  HVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMF---QLIDIARQTAQGMDY 147
Query: 590 LHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPE 649
           LH  +   +IHRD+K++NI L + +  KI DFG+A +        + ++  G+  +M+PE
Sbjct: 148 LHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPE 204
Query: 650 YAQQ---GLFSIKSDVFSFGVLLLETLSSK 676
             +      FS +SDV+S+G++L E ++ +
Sbjct: 205 VIRMQDNNPFSFQSDVYSYGIVLYELMTGE 234

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/305 (25%), Positives = 139/305 (45%), Gaps = 39/305 (12%)
Query: 460 SWFPMFSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQE-VAVKRLSSQSGQGQ--- 515
           S FP   L ++  A      E ++G+GGFG V+KGRL+  +  VA+K L     +G+   
Sbjct: 6   SEFPKSRLPTL--ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEM 63
Query: 516 ----EEFKNEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLL 571
               +EF+ E+ +++ L H N+V+                 +P   L   L D  K + +
Sbjct: 64  IEKFQEFQREVFIMSNLNHPNIVK--LYGLMHNPPRMVMEFVPCGDLYHRLLD--KAHPI 119
Query: 572 GWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDK-DMN----PKISDFGMARI 626
            W  ++R++  IA G+ Y+ Q     ++HRDL++ NI L   D N     K++DF +++ 
Sbjct: 120 KWSVKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ- 177
Query: 627 FGGDELQSKTKRIVGTYGYMSPEY--AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNT 684
               +       ++G + +M+PE   A++  ++ K+D +SF ++L   L+ +   D  + 
Sbjct: 178 ----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSY 233
Query: 685 NSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVV 744
             +  +    +        E + PT+  +       R  NV  LC   D   RP    +V
Sbjct: 234 GKIKFINMIRE--------EGLRPTIPEDCP----PRLRNVIELCWSGDPKKRPHFSYIV 281
Query: 745 SMLTN 749
             L+ 
Sbjct: 282 KELSE 286

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 19/218 (8%)
Query: 475 ANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
              +   ++G G FG VYKG+      V +  +++ + Q  + FKNE+ ++ K +H N++
Sbjct: 24  GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 83
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
                                 SL   L  S  E        + I    A+G+ YLH  S
Sbjct: 84  -LFMGYSTKPQLAIVTQWCEGSSLYHHLHAS--ETKFEMKKLIDIARQTARGMDYLHAKS 140
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMA----RIFGGDELQSKTKRIVGTYGYMSPEY 650
              +IHRDLK++NI L +D   KI DFG+A    R  G  + +    ++ G+  +M+PE 
Sbjct: 141 ---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE----QLSGSILWMAPEV 193
Query: 651 AQQ---GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTN 685
            +      +S +SDV++FG++L E ++ +    +SN N
Sbjct: 194 IRMQDSNPYSFQSDVYAFGIVLYELMTGQ--LPYSNIN 229

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 21/205 (10%)
Query: 482 KLGEGGFGPVYKGRLL-----NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRX 536
           +LG+G FG V   R        G+ VAVK+L   + +   +F+ EI+++  LQH N+V+ 
Sbjct: 20  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 537 XXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIE------GIAQGLLYL 590
                                ++F  + S +E L     R+  I+       I +G+ YL
Sbjct: 80  KGVCYSAGRRNLKLI------MEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYL 133
Query: 591 HQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRI-VGTYGYMSPE 649
                 R IHRDL   NIL++ +   KI DFG+ ++   D+   K K        + +PE
Sbjct: 134 ---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 190
Query: 650 YAQQGLFSIKSDVFSFGVLLLETLS 674
              +  FS+ SDV+SFGV+L E  +
Sbjct: 191 SLTESKFSVASDVWSFGVVLYELFT 215

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 99/199 (49%), Gaps = 18/199 (9%)
Query: 483 LGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEE--FKNEIKLIAKLQHRNLVRXXXX 539
           LG+G FG V K +  +  QE AVK ++  S + ++      E++L+ KL H N+++    
Sbjct: 30  LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDST-KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRV 598
                             L    FD   K          RII+ +  G+ Y+H+++   +
Sbjct: 90  LEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---I 142
Query: 599 IHRDLKASNILL---DKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGL 655
           +HRDLK  NILL   +KD + KI DFG++  F   +  +K K  +GT  Y++PE   +G 
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIAPE-VLRGT 198
Query: 656 FSIKSDVFSFGVLLLETLS 674
           +  K DV+S GV+L   LS
Sbjct: 199 YDEKCDVWSAGVILYILLS 217

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 99/199 (49%), Gaps = 18/199 (9%)
Query: 483 LGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEE--FKNEIKLIAKLQHRNLVRXXXX 539
           LG+G FG V K +  +  QE AVK ++  S + ++      E++L+ KL H N+++    
Sbjct: 30  LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDST-KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRV 598
                             L    FD   K          RII+ +  G+ Y+H+++   +
Sbjct: 90  LEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---I 142
Query: 599 IHRDLKASNILL---DKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGL 655
           +HRDLK  NILL   +KD + KI DFG++  F   +  +K K  +GT  Y++PE   +G 
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIAPE-VLRGT 198
Query: 656 FSIKSDVFSFGVLLLETLS 674
           +  K DV+S GV+L   LS
Sbjct: 199 YDEKCDVWSAGVILYILLS 217

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 130/291 (44%), Gaps = 40/291 (13%)
Query: 480 ENKLGEGGFGPVYKGRL-LNGQE---VAVKRLSSQSGQGQE-EFKNEIKLIAKLQHRNLV 534
           E  +G G FG V  G L L G+    VA+K L S   + Q  +F +E  ++ +  H N++
Sbjct: 12  EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDS----TKENLLGWGTRVRIIEGIAQGLLYL 590
                             M N SLD FL  +    T   L+G      ++ GIA G+ YL
Sbjct: 72  HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVG------MLRGIAAGMKYL 125
Query: 591 HQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG---TYGYMS 647
              + +  +HR L A NIL++ ++  K+SDFG++R    D         +G      + +
Sbjct: 126 ---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTA 182
Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLSSKRNT--DFSNTNSLTLLGHAWDLWKDDRAWEL 705
           PE  Q   F+  SDV+S+G+++ E +S       D +N + +  +         ++ + L
Sbjct: 183 PEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAI---------EQDYRL 233
Query: 706 IDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPH 756
             P     A + ++       L C Q+D   RP   ++V+ L +K I  P+
Sbjct: 234 PPPMDCPSALHQLM-------LDCWQKDRNHRPKFGQIVNTL-DKMIRNPN 276

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 107/234 (45%), Gaps = 18/234 (7%)
Query: 473 ATANFSTENKLGEGGFGPVYKGRLLN--GQEVAVKRLSSQSGQGQEEFKN--EIKLIAKL 528
           A   +    ++GEG +G V+K R L   G+ VA+KR+  Q+G+         E+ ++  L
Sbjct: 9   ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 529 Q---HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFL---FDSTKENLLGWGTRVRIIEG 582
           +   H N+VR                 +  + +D  L    D   E  +   T   ++  
Sbjct: 69  ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 128
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           + +GL +LH +   RV+HRDLK  NIL+      K++DFG+ARI+     Q     +V T
Sbjct: 129 LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS---FQMALTSVVVT 182
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDL 696
             Y +PE   Q  ++   D++S G +  E    +R   F  ++ +  LG   D+
Sbjct: 183 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMF--RRKPLFRGSSDVDQLGKILDV 234

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 134/306 (43%), Gaps = 41/306 (13%)
Query: 482 KLGEGGFGPVYKGR---LLNGQ---EVAVKRLS-SQSGQGQEEFKNEIKLIAKLQHRNLV 534
           +LG+G FG VY+G    ++ G+    VAVK ++ S S + + EF NE  ++      ++V
Sbjct: 24  ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFL--FDSTKENLLG-----WGTRVRIIEGIAQGL 587
           R                 M +  L  +L       EN  G         +++   IA G+
Sbjct: 84  RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGDELQSKTKRIVGTYGYM 646
            YL+     + +HR+L A N ++  D   KI DFGM R I+  D  +   K ++    +M
Sbjct: 144 AYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-WM 199
Query: 647 SPEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWE 704
           +PE  + G+F+  SD++SFGV+L E  +L+ +     SN   L  +     L + D   E
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE 259
Query: 705 LIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPRQPAFSS 764
                           R  ++  +C Q +   RPT  E+V++L +      HP  P  S 
Sbjct: 260 ----------------RVTDLMRMCWQFNPNMRPTFLEIVNLLKDDL----HPSFPEVSF 299
Query: 765 IRGLKN 770
               +N
Sbjct: 300 FHSEEN 305

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 134/306 (43%), Gaps = 41/306 (13%)
Query: 482 KLGEGGFGPVYKGR---LLNGQ---EVAVKRLS-SQSGQGQEEFKNEIKLIAKLQHRNLV 534
           +LG+G FG VY+G    ++ G+    VAVK ++ S S + + EF NE  ++      ++V
Sbjct: 25  ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 84
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFL--FDSTKENLLG-----WGTRVRIIEGIAQGL 587
           R                 M +  L  +L       EN  G         +++   IA G+
Sbjct: 85  RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGDELQSKTKRIVGTYGYM 646
            YL+     + +HR+L A N ++  D   KI DFGM R I+  D  +   K ++    +M
Sbjct: 145 AYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-WM 200
Query: 647 SPEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWE 704
           +PE  + G+F+  SD++SFGV+L E  +L+ +     SN   L  +     L + D   E
Sbjct: 201 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE 260
Query: 705 LIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPRQPAFSS 764
                           R  ++  +C Q +   RPT  E+V++L +      HP  P  S 
Sbjct: 261 ----------------RVTDLMRMCWQFNPNMRPTFLEIVNLLKDDL----HPSFPEVSF 300
Query: 765 IRGLKN 770
               +N
Sbjct: 301 FHSEEN 306

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 96/223 (43%), Gaps = 27/223 (12%)
Query: 475 ANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQ-GQEEFKNEIKLIAKLQHRN 532
            +F     LG GGFG V++ +  ++    A+KR+   + +  +E+   E+K +AKL+H  
Sbjct: 5   TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGW------------GTRVRII 580
           +VR                  P   L   +    KENL  W               + I 
Sbjct: 65  IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIF 124
Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ------- 633
             IA+ + +LH      ++HRDLK SNI    D   K+ DFG+      DE +       
Sbjct: 125 LQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPM 181
Query: 634 ---SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETL 673
              ++    VGT  YMSPE      +S K D+FS G++L E L
Sbjct: 182 PAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 107/234 (45%), Gaps = 18/234 (7%)
Query: 473 ATANFSTENKLGEGGFGPVYKGRLLN--GQEVAVKRLSSQSGQGQEEFKN--EIKLIAKL 528
           A   +    ++GEG +G V+K R L   G+ VA+KR+  Q+G+         E+ ++  L
Sbjct: 9   ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 529 Q---HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFL---FDSTKENLLGWGTRVRIIEG 582
           +   H N+VR                 +  + +D  L    D   E  +   T   ++  
Sbjct: 69  ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 128
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           + +GL +LH +   RV+HRDLK  NIL+      K++DFG+ARI+     Q     +V T
Sbjct: 129 LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS---FQMALTSVVVT 182
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDL 696
             Y +PE   Q  ++   D++S G +  E    +R   F  ++ +  LG   D+
Sbjct: 183 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMF--RRKPLFRGSSDVDQLGKILDV 234

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 101/223 (45%), Gaps = 21/223 (9%)
Query: 481 NKLGEGGFGPVYKGRLL-----NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR 535
            +LG+G FG V   R        G+ VAVK+L   + +   +F+ EI+++  LQH N+V+
Sbjct: 19  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 536 XXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIE------GIAQGLLY 589
                                 +++  + S ++ L     R+  I+       I +G+ Y
Sbjct: 79  YKGVCYSAGRRNLKLI------MEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEY 132
Query: 590 LHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRI-VGTYGYMSP 648
           L      R IHRDL   NIL++ +   KI DFG+ ++   D+   K K        + +P
Sbjct: 133 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 189
Query: 649 EYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLG 691
           E   +  FS+ SDV+SFGV+L E  +    +       + ++G
Sbjct: 190 ESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIG 232

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 77.0 bits (188), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 101/222 (45%), Gaps = 11/222 (4%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
           + + ++KLG G +G VY G        VAVK L   + +  EEF  E  ++ +++H NLV
Sbjct: 33  DITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 91
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
           +                 MP  +L  +L +  +E +    T V ++    Q    +    
Sbjct: 92  QLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEV----TAVVLLYMATQISSAMEYLE 147
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG 654
           +   IHRDL A N L+ ++   K++DFG++R+  GD   +          + +PE     
Sbjct: 148 KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 206
Query: 655 LFSIKSDVFSFGVLLLET----LSSKRNTDFSNTNSLTLLGH 692
            FSIKSDV++FGVLL E     +S     D S    L   G+
Sbjct: 207 TFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGY 248

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 77.0 bits (188), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 107/234 (45%), Gaps = 18/234 (7%)
Query: 473 ATANFSTENKLGEGGFGPVYKGRLLN--GQEVAVKRLSSQSGQGQEEFKN--EIKLIAKL 528
           A   +    ++GEG +G V+K R L   G+ VA+KR+  Q+G+         E+ ++  L
Sbjct: 9   ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 529 Q---HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFL---FDSTKENLLGWGTRVRIIEG 582
           +   H N+VR                 +  + +D  L    D   E  +   T   ++  
Sbjct: 69  ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 128
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           + +GL +LH +   RV+HRDLK  NIL+      K++DFG+ARI+     Q     +V T
Sbjct: 129 LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS---FQMALTSVVVT 182
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDL 696
             Y +PE   Q  ++   D++S G +  E    +R   F  ++ +  LG   D+
Sbjct: 183 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMF--RRKPLFRGSSDVDQLGKILDV 234

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 77.0 bits (188), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 95/213 (44%), Gaps = 17/213 (7%)
Query: 476 NFSTENKLGEGGFGPVYKGRL------LNGQEVAVKRLSSQ-SGQGQEEFKNEIKLIAKL 528
           N +    LG G FG VY+G++       +  +VAVK L    S Q + +F  E  +I+KL
Sbjct: 46  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKL 105
Query: 529 QHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDS----TKENLLGWGTRVRIIEGIA 584
            H+N+VR                 M    L  FL ++    ++ + L     + +   IA
Sbjct: 106 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 165
Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLD---KDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            G  YL +      IHRD+ A N LL         KI DFGMAR         K    + 
Sbjct: 166 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 222
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
              +M PE   +G+F+ K+D +SFGVLL E  S
Sbjct: 223 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 77.0 bits (188), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 95/213 (44%), Gaps = 17/213 (7%)
Query: 476 NFSTENKLGEGGFGPVYKGRL------LNGQEVAVKRLSSQ-SGQGQEEFKNEIKLIAKL 528
           N +    LG G FG VY+G++       +  +VAVK L    S Q + +F  E  +I+KL
Sbjct: 32  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKL 91
Query: 529 QHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDS----TKENLLGWGTRVRIIEGIA 584
            H+N+VR                 M    L  FL ++    ++ + L     + +   IA
Sbjct: 92  NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 151
Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLD---KDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            G  YL +      IHRD+ A N LL         KI DFGMAR         K    + 
Sbjct: 152 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 208
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
              +M PE   +G+F+ K+D +SFGVLL E  S
Sbjct: 209 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 82/330 (24%), Positives = 137/330 (41%), Gaps = 51/330 (15%)
Query: 452 AANSRTRDSWFPMFSLASVSAATANFSTENKLGEGGFGPVY----KGRLLNGQE--VAVK 505
           AA+    D W           A    +   +LG+G FG VY    KG + +  E  VA+K
Sbjct: 5   AADVYVPDEW---------EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIK 55
Query: 506 RLSSQSGQGQE-EFKNEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFL-- 562
            ++  +   +  EF NE  ++ +    ++VR                 M    L  +L  
Sbjct: 56  TVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 115
Query: 563 FDSTKEN--LLGWGTRVRIIE---GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPK 617
                EN  +L   +  ++I+    IA G+ YL+     + +HRDL A N ++ +D   K
Sbjct: 116 LRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVK 172
Query: 618 ISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLE--TLSS 675
           I DFGM R     +   K  + +    +MSPE  + G+F+  SDV+SFGV+L E  TL+ 
Sbjct: 173 IGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 232
Query: 676 KRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAA 735
           +     SN   L  +     L K D   +++   ++                +C Q +  
Sbjct: 233 QPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMR----------------MCWQYNPK 276
Query: 736 DRPTMFEVVSMLTNKTINLPHPRQPAFSSI 765
            RP+  E++S +  +        +P F  +
Sbjct: 277 MRPSFLEIISSIKEEM-------EPGFREV 299

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 18/204 (8%)
Query: 483 LGEGGFGPVYK-GRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXXX 541
           LG+G FG   K      G+ + +K L     + Q  F  E+K++  L+H N+++      
Sbjct: 18  LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 542 XXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHR 601
                      +   +L   +   + ++   W  RV   + IA G+ YLH    + +IHR
Sbjct: 78  KDKRLNFITEYIKGGTLRGII--KSMDSQYPWSQRVSFAKDIASGMAYLHS---MNIIHR 132
Query: 602 DLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKR------------IVGTYGYMSPE 649
           DL + N L+ ++ N  ++DFG+AR+   ++ Q +  R            +VG   +M+PE
Sbjct: 133 DLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPE 192
Query: 650 YAQQGLFSIKSDVFSFGVLLLETL 673
                 +  K DVFSFG++L E +
Sbjct: 193 MINGRSYDEKVDVFSFGIVLCEII 216

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 99/199 (49%), Gaps = 18/199 (9%)
Query: 483 LGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEE--FKNEIKLIAKLQHRNLVRXXXX 539
           LG+G FG V K +  +  QE AVK ++  S + ++      E++L+ KL H N+++    
Sbjct: 30  LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDST-KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRV 598
                             L    FD   K          RII+ +  G+ Y+H+++   +
Sbjct: 90  LEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---I 142
Query: 599 IHRDLKASNILL---DKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGL 655
           +HRDLK  NILL   +KD + KI DFG++  F   +  +K K  +GT  Y++PE   +G 
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIAPE-VLRGT 198
Query: 656 FSIKSDVFSFGVLLLETLS 674
           +  K DV+S GV+L   LS
Sbjct: 199 YDEKCDVWSAGVILYILLS 217

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 126/291 (43%), Gaps = 40/291 (13%)
Query: 483 LGEGGFG--------PVYKGRLLNGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNL 533
           LGEG FG        P   G    G+ VAVK L + +G Q +  +K EI ++  L H ++
Sbjct: 39  LGEGHFGKVSLYCYDPTNDG---TGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHI 95
Query: 534 VRXXX--XXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH 591
           ++                   +P  SL     D    + +G    +   + I +G+ YLH
Sbjct: 96  IKYKGCCEDAGAASLQLVMEYVPLGSLR----DYLPRHSIGLAQLLLFAQQICEGMAYLH 151
Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGDELQSKTKRIVGTYGYMSPEY 650
                  IHRDL A N+LLD D   KI DFG+A+ +  G E     +       + +PE 
Sbjct: 152 AQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPEC 208
Query: 651 AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID--- 707
            ++  F   SDV+SFGV L E L+   ++    T  L L+G A       R  EL++   
Sbjct: 209 LKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGE 268
Query: 708 -----PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTIN 753
                     E  +L+ N        C + +A+ RPT   ++ +L  KT++
Sbjct: 269 RLPRPDKCPAEVYHLMKN--------CWETEASFRPTFENLIPIL--KTVH 309

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 84/331 (25%), Positives = 140/331 (42%), Gaps = 53/331 (16%)
Query: 452 AANSRTRDSWFPMFSLASVSAATANFSTENKLGEGGFGPVY----KGRLLNGQE--VAVK 505
           AA+    D W           A    +   +LG+G FG VY    KG + +  E  VA+K
Sbjct: 11  AADVYVPDEW---------EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIK 61
Query: 506 RLSSQSGQGQE-EFKNEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFL-- 562
            ++  +   +  EF NE  ++ +    ++VR                 M    L  +L  
Sbjct: 62  TVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 121
Query: 563 FDSTKEN--LLGWGTRVRIIE---GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPK 617
                EN  +L   +  ++I+    IA G+ YL+     + +HRDL A N ++ +D   K
Sbjct: 122 LRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVK 178
Query: 618 ISDFGMAR-IFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLE--TLS 674
           I DFGM R I+  D  +   K ++    +MSPE  + G+F+  SDV+SFGV+L E  TL+
Sbjct: 179 IGDFGMTRDIYETDYYRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 237
Query: 675 SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDA 734
            +     SN   L  +     L K D   +++   ++                +C Q + 
Sbjct: 238 EQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMR----------------MCWQYNP 281
Query: 735 ADRPTMFEVVSMLTNKTINLPHPRQPAFSSI 765
             RP+  E++S +  +        +P F  +
Sbjct: 282 KMRPSFLEIISSIKEEM-------EPGFREV 305

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 76.6 bits (187), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 84/331 (25%), Positives = 140/331 (42%), Gaps = 53/331 (16%)
Query: 452 AANSRTRDSWFPMFSLASVSAATANFSTENKLGEGGFGPVY----KGRLLNGQE--VAVK 505
           AA+    D W           A    +   +LG+G FG VY    KG + +  E  VA+K
Sbjct: 4   AADVYVPDEW---------EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIK 54
Query: 506 RLSSQSGQGQE-EFKNEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFL-- 562
            ++  +   +  EF NE  ++ +    ++VR                 M    L  +L  
Sbjct: 55  TVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 114
Query: 563 FDSTKEN--LLGWGTRVRIIE---GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPK 617
                EN  +L   +  ++I+    IA G+ YL+     + +HRDL A N ++ +D   K
Sbjct: 115 LRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVK 171
Query: 618 ISDFGMAR-IFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLE--TLS 674
           I DFGM R I+  D  +   K ++    +MSPE  + G+F+  SDV+SFGV+L E  TL+
Sbjct: 172 IGDFGMTRDIYETDYYRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 230
Query: 675 SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDA 734
            +     SN   L  +     L K D   +++   ++                +C Q + 
Sbjct: 231 EQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMR----------------MCWQYNP 274
Query: 735 ADRPTMFEVVSMLTNKTINLPHPRQPAFSSI 765
             RP+  E++S +  +        +P F  +
Sbjct: 275 KMRPSFLEIISSIKEEM-------EPGFREV 298

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 81/311 (26%), Positives = 133/311 (42%), Gaps = 42/311 (13%)
Query: 471 SAATANFSTENKLGEGGFGPVY----KGRLLNGQE--VAVKRLSSQSGQGQE-EFKNEIK 523
             A    +   +LG+G FG VY    KG + +  E  VA+K ++  +   +  EF NE  
Sbjct: 6   EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 65
Query: 524 LIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFL--FDSTKEN--LLGWGTRVRI 579
           ++ +    ++VR                 M    L  +L       EN  +L   +  ++
Sbjct: 66  VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 125
Query: 580 IE---GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKT 636
           I+    IA G+ YL+     + +HRDL A N ++ +D   KI DFGM R     +   K 
Sbjct: 126 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKG 182
Query: 637 KRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAW 694
            + +    +MSPE  + G+F+  SDV+SFGV+L E  TL+ +     SN   L  +    
Sbjct: 183 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG 242
Query: 695 DLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINL 754
            L K D   +++          L L R      +C Q +   RP+  E++S +  +    
Sbjct: 243 LLDKPDNCPDML----------LELMR------MCWQYNPKMRPSFLEIISSIKEEM--- 283
Query: 755 PHPRQPAFSSI 765
               +P F  +
Sbjct: 284 ----EPGFREV 290

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 84/331 (25%), Positives = 140/331 (42%), Gaps = 53/331 (16%)
Query: 452 AANSRTRDSWFPMFSLASVSAATANFSTENKLGEGGFGPVY----KGRLLNGQE--VAVK 505
           AA+    D W           A    +   +LG+G FG VY    KG + +  E  VA+K
Sbjct: 4   AADVYVPDEW---------EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIK 54
Query: 506 RLSSQSGQGQE-EFKNEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFL-- 562
            ++  +   +  EF NE  ++ +    ++VR                 M    L  +L  
Sbjct: 55  TVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 114
Query: 563 FDSTKEN--LLGWGTRVRIIE---GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPK 617
                EN  +L   +  ++I+    IA G+ YL+     + +HRDL A N ++ +D   K
Sbjct: 115 LRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVK 171
Query: 618 ISDFGMAR-IFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLE--TLS 674
           I DFGM R I+  D  +   K ++    +MSPE  + G+F+  SDV+SFGV+L E  TL+
Sbjct: 172 IGDFGMTRDIYETDYYRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 230
Query: 675 SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDA 734
            +     SN   L  +     L K D   +++   ++                +C Q + 
Sbjct: 231 EQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMR----------------MCWQYNP 274
Query: 735 ADRPTMFEVVSMLTNKTINLPHPRQPAFSSI 765
             RP+  E++S +  +        +P F  +
Sbjct: 275 KMRPSFLEIISSIKEEM-------EPGFREV 298

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 84/331 (25%), Positives = 140/331 (42%), Gaps = 53/331 (16%)
Query: 452 AANSRTRDSWFPMFSLASVSAATANFSTENKLGEGGFGPVY----KGRLLNGQE--VAVK 505
           AA+    D W           A    +   +LG+G FG VY    KG + +  E  VA+K
Sbjct: 33  AADVYVPDEW---------EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIK 83
Query: 506 RLSSQSGQGQE-EFKNEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFL-- 562
            ++  +   +  EF NE  ++ +    ++VR                 M    L  +L  
Sbjct: 84  TVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 143
Query: 563 FDSTKEN--LLGWGTRVRIIE---GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPK 617
                EN  +L   +  ++I+    IA G+ YL+     + +HRDL A N ++ +D   K
Sbjct: 144 LRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVK 200
Query: 618 ISDFGMAR-IFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLE--TLS 674
           I DFGM R I+  D  +   K ++    +MSPE  + G+F+  SDV+SFGV+L E  TL+
Sbjct: 201 IGDFGMTRDIYETDYYRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 259
Query: 675 SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDA 734
            +     SN   L  +     L K D   +++   ++                +C Q + 
Sbjct: 260 EQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMR----------------MCWQYNP 303
Query: 735 ADRPTMFEVVSMLTNKTINLPHPRQPAFSSI 765
             RP+  E++S +  +        +P F  +
Sbjct: 304 KMRPSFLEIISSIKEEM-------EPGFREV 327

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 76.3 bits (186), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 84/331 (25%), Positives = 140/331 (42%), Gaps = 53/331 (16%)
Query: 452 AANSRTRDSWFPMFSLASVSAATANFSTENKLGEGGFGPVY----KGRLLNGQE--VAVK 505
           AA+    D W           A    +   +LG+G FG VY    KG + +  E  VA+K
Sbjct: 5   AADVYVPDEW---------EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIK 55
Query: 506 RLSSQSGQGQE-EFKNEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFL-- 562
            ++  +   +  EF NE  ++ +    ++VR                 M    L  +L  
Sbjct: 56  TVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 115
Query: 563 FDSTKEN--LLGWGTRVRIIE---GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPK 617
                EN  +L   +  ++I+    IA G+ YL+     + +HRDL A N ++ +D   K
Sbjct: 116 LRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVK 172
Query: 618 ISDFGMAR-IFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLE--TLS 674
           I DFGM R I+  D  +   K ++    +MSPE  + G+F+  SDV+SFGV+L E  TL+
Sbjct: 173 IGDFGMTRDIYETDYYRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 231
Query: 675 SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDA 734
            +     SN   L  +     L K D   +++   ++                +C Q + 
Sbjct: 232 EQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMR----------------MCWQYNP 275
Query: 735 ADRPTMFEVVSMLTNKTINLPHPRQPAFSSI 765
             RP+  E++S +  +        +P F  +
Sbjct: 276 KMRPSFLEIISSIKEEM-------EPGFREV 299

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 75.9 bits (185), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 19/203 (9%)
Query: 483 LGEGGFGPVYKGRLLNGQ-EVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXXX 541
           LG+G +G VY GR L+ Q  +A+K +  +  +  +    EI L   L+H+N+V+      
Sbjct: 30  LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 542 XXXXXXXXXXXMPNKSLDFFLFD-----STKENLLGWGTRVRIIEGIAQGLLYLHQYSRL 596
                      +P  SL   L          E  +G+ T+      I +GL YLH     
Sbjct: 90  ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ-----ILEGLKYLHDN--- 141
Query: 597 RVIHRDLKASNILLDKDMNP-KISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGL 655
           +++HRD+K  N+L++      KISDFG ++   G  +   T+   GT  YM+PE   +G 
Sbjct: 142 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG--INPCTETFTGTLQYMAPEIIDKGP 199
Query: 656 --FSIKSDVFSFGVLLLETLSSK 676
             +   +D++S G  ++E  + K
Sbjct: 200 RGYGKAADIWSLGCTIIEMATGK 222

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 75.9 bits (185), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 84/331 (25%), Positives = 140/331 (42%), Gaps = 53/331 (16%)
Query: 452 AANSRTRDSWFPMFSLASVSAATANFSTENKLGEGGFGPVY----KGRLLNGQE--VAVK 505
           AA+    D W           A    +   +LG+G FG VY    KG + +  E  VA+K
Sbjct: 2   AADVFVPDEW---------EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIK 52
Query: 506 RLSSQSGQGQE-EFKNEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFL-- 562
            ++  +   +  EF NE  ++ +    ++VR                 M    L  +L  
Sbjct: 53  TVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 112
Query: 563 FDSTKEN--LLGWGTRVRIIE---GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPK 617
                EN  +L   +  ++I+    IA G+ YL+     + +HRDL A N ++ +D   K
Sbjct: 113 LRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVK 169
Query: 618 ISDFGMAR-IFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLE--TLS 674
           I DFGM R I+  D  +   K ++    +MSPE  + G+F+  SDV+SFGV+L E  TL+
Sbjct: 170 IGDFGMTRDIYETDYYRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 228
Query: 675 SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDA 734
            +     SN   L  +     L K D   +++   ++                +C Q + 
Sbjct: 229 EQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMR----------------MCWQYNP 272
Query: 735 ADRPTMFEVVSMLTNKTINLPHPRQPAFSSI 765
             RP+  E++S +  +        +P F  +
Sbjct: 273 KMRPSFLEIISSIKEEM-------EPGFREV 296

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 75.9 bits (185), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 21/206 (10%)
Query: 481 NKLGEGGFGPVYKGRLL-----NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR 535
            +LG+G FG V   R        G+ VAVK+L   + +   +F+ EI+++  LQH N+V+
Sbjct: 15  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 74
Query: 536 XXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIE------GIAQGLLY 589
                                 +++  + S ++ L     R+  I+       I +G+ Y
Sbjct: 75  YKGVCYSAGRRNLKLI------MEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 128
Query: 590 LHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRI-VGTYGYMSP 648
           L      R IHRDL   NIL++ +   KI DFG+ ++   D+   K K        + +P
Sbjct: 129 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 185
Query: 649 EYAQQGLFSIKSDVFSFGVLLLETLS 674
           E   +  FS+ SDV+SFGV+L E  +
Sbjct: 186 ESLTESKFSVASDVWSFGVVLYELFT 211

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 94/213 (44%), Gaps = 17/213 (7%)
Query: 476 NFSTENKLGEGGFGPVYKGRL------LNGQEVAVKRLSSQ-SGQGQEEFKNEIKLIAKL 528
           N +    LG G FG VY+G++       +  +VAVK L    S Q + +F  E  +I+K 
Sbjct: 31  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 90
Query: 529 QHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDS----TKENLLGWGTRVRIIEGIA 584
            H+N+VR                 M    L  FL ++    ++ + L     + +   IA
Sbjct: 91  NHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 150
Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLD---KDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            G  YL +      IHRD+ A N LL         KI DFGMAR         K    + 
Sbjct: 151 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 207
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
              +M PE   +G+F+ K+D +SFGVLL E  S
Sbjct: 208 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 94/213 (44%), Gaps = 17/213 (7%)
Query: 476 NFSTENKLGEGGFGPVYKGRL------LNGQEVAVKRLSSQ-SGQGQEEFKNEIKLIAKL 528
           N +    LG G FG VY+G++       +  +VAVK L    S Q + +F  E  +I+K 
Sbjct: 23  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 82
Query: 529 QHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDS----TKENLLGWGTRVRIIEGIA 584
            H+N+VR                 M    L  FL ++    ++ + L     + +   IA
Sbjct: 83  NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 142
Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLD---KDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            G  YL +      IHRD+ A N LL         KI DFGMAR         K    + 
Sbjct: 143 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 199
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
              +M PE   +G+F+ K+D +SFGVLL E  S
Sbjct: 200 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 94/213 (44%), Gaps = 17/213 (7%)
Query: 476 NFSTENKLGEGGFGPVYKGRL------LNGQEVAVKRLSSQ-SGQGQEEFKNEIKLIAKL 528
           N +    LG G FG VY+G++       +  +VAVK L    S Q + +F  E  +I+K 
Sbjct: 46  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 105
Query: 529 QHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDS----TKENLLGWGTRVRIIEGIA 584
            H+N+VR                 M    L  FL ++    ++ + L     + +   IA
Sbjct: 106 NHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 165
Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLD---KDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            G  YL +      IHRD+ A N LL         KI DFGMAR         K    + 
Sbjct: 166 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 222
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
              +M PE   +G+F+ K+D +SFGVLL E  S
Sbjct: 223 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 94/213 (44%), Gaps = 17/213 (7%)
Query: 476 NFSTENKLGEGGFGPVYKGRL------LNGQEVAVKRLSSQ-SGQGQEEFKNEIKLIAKL 528
           N +    LG G FG VY+G++       +  +VAVK L    S Q + +F  E  +I+K 
Sbjct: 31  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 90
Query: 529 QHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDS----TKENLLGWGTRVRIIEGIA 584
            H+N+VR                 M    L  FL ++    ++ + L     + +   IA
Sbjct: 91  NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 150
Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLD---KDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            G  YL +      IHRD+ A N LL         KI DFGMAR         K    + 
Sbjct: 151 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 207
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
              +M PE   +G+F+ K+D +SFGVLL E  S
Sbjct: 208 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 94/213 (44%), Gaps = 17/213 (7%)
Query: 476 NFSTENKLGEGGFGPVYKGRL------LNGQEVAVKRLSSQ-SGQGQEEFKNEIKLIAKL 528
           N +    LG G FG VY+G++       +  +VAVK L    S Q + +F  E  +I+K 
Sbjct: 32  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 91
Query: 529 QHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDS----TKENLLGWGTRVRIIEGIA 584
            H+N+VR                 M    L  FL ++    ++ + L     + +   IA
Sbjct: 92  NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 151
Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLD---KDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            G  YL +      IHRD+ A N LL         KI DFGMAR         K    + 
Sbjct: 152 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 208
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
              +M PE   +G+F+ K+D +SFGVLL E  S
Sbjct: 209 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 101/223 (45%), Gaps = 21/223 (9%)
Query: 481 NKLGEGGFGPVYKGRLL-----NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR 535
            +LG+G FG V   R        G+ VAVK+L   + +   +F+ EI+++  LQH N+V+
Sbjct: 16  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 536 XXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIE------GIAQGLLY 589
                                 +++  + S ++ L     R+  I+       I +G+ Y
Sbjct: 76  YKGVCYSAGRRNLKLI------MEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 129
Query: 590 LHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRI-VGTYGYMSP 648
           L      R IHRDL   NIL++ +   KI DFG+ ++   D+   K K        + +P
Sbjct: 130 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 186
Query: 649 EYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLG 691
           E   +  FS+ SDV+SFGV+L E  +    +       + ++G
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIG 229

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 135/312 (43%), Gaps = 44/312 (14%)
Query: 471 SAATANFSTENKLGEGGFGPVY----KGRLLNGQE--VAVKRLSSQSGQGQE-EFKNEIK 523
             A    +   +LG+G FG VY    KG + +  E  VA+K ++  +   +  EF NE  
Sbjct: 8   EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 67
Query: 524 LIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFL--FDSTKEN--LLGWGTRVRI 579
           ++ +    ++VR                 M    L  +L       EN  +L   +  ++
Sbjct: 68  VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 127
Query: 580 IE---GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGDELQSK 635
           I+    IA G+ YL+     + +HRDL A N ++ +D   KI DFGM R I+  D  +  
Sbjct: 128 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 184
Query: 636 TKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHA 693
            K ++    +MSPE  + G+F+  SDV+SFGV+L E  TL+ +     SN   L  +   
Sbjct: 185 GKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG 243
Query: 694 WDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTIN 753
             L K D   +++   ++                +C Q +   RP+  E++S +  +   
Sbjct: 244 GLLDKPDNCPDMLFELMR----------------MCWQYNPKMRPSFLEIISSIKEEM-- 285
Query: 754 LPHPRQPAFSSI 765
                +P F  +
Sbjct: 286 -----EPGFREV 292

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 101/223 (45%), Gaps = 21/223 (9%)
Query: 481 NKLGEGGFGPVYKGRLL-----NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR 535
            +LG+G FG V   R        G+ VAVK+L   + +   +F+ EI+++  LQH N+V+
Sbjct: 14  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 73
Query: 536 XXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIE------GIAQGLLY 589
                                 +++  + S ++ L     R+  I+       I +G+ Y
Sbjct: 74  YKGVCYSAGRRNLKLI------MEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 127
Query: 590 LHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRI-VGTYGYMSP 648
           L      R IHRDL   NIL++ +   KI DFG+ ++   D+   K K        + +P
Sbjct: 128 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 184
Query: 649 EYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLG 691
           E   +  FS+ SDV+SFGV+L E  +    +       + ++G
Sbjct: 185 ESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIG 227

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 21/206 (10%)
Query: 481 NKLGEGGFGPVYKGRLL-----NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR 535
            +LG+G FG V   R        G+ VAVK+L   + +   +F+ EI+++  LQH N+V+
Sbjct: 16  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 536 XXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIE------GIAQGLLY 589
                                 +++  + S ++ L     R+  I+       I +G+ Y
Sbjct: 76  YKGVCYSAGRRNLKLI------MEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 129
Query: 590 LHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRI-VGTYGYMSP 648
           L      R IHRDL   NIL++ +   KI DFG+ ++   D+   K K        + +P
Sbjct: 130 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 186
Query: 649 EYAQQGLFSIKSDVFSFGVLLLETLS 674
           E   +  FS+ SDV+SFGV+L E  +
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFT 212

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 101/223 (45%), Gaps = 21/223 (9%)
Query: 481 NKLGEGGFGPVYKGRLL-----NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR 535
            +LG+G FG V   R        G+ VAVK+L   + +   +F+ EI+++  LQH N+V+
Sbjct: 20  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 79
Query: 536 XXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIE------GIAQGLLY 589
                                 +++  + S ++ L     R+  I+       I +G+ Y
Sbjct: 80  YKGVCYSAGRRNLKLI------MEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 133
Query: 590 LHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRI-VGTYGYMSP 648
           L      R IHRDL   NIL++ +   KI DFG+ ++   D+   K K        + +P
Sbjct: 134 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 190
Query: 649 EYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLG 691
           E   +  FS+ SDV+SFGV+L E  +    +       + ++G
Sbjct: 191 ESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIG 233

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 107/249 (42%), Gaps = 25/249 (10%)
Query: 448 KGNKAANSRTRDSWFPMFSLASVSAATA--------NFSTENKLGEGGFGPVYKGRL--- 496
           K +K   S     + P +S A  +++ +        N +    LG G FG VY+G++   
Sbjct: 2   KLSKLRTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGM 61
Query: 497 ---LNGQEVAVKRLSSQ-SGQGQEEFKNEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXX 552
               +  +VAVK L    S Q + +F  E  +I+K  H+N+VR                 
Sbjct: 62  PNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLEL 121
Query: 553 MPNKSLDFFLFDS----TKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNI 608
           M    L  FL ++    ++ + L     + +   IA G  YL +      IHRD+ A N 
Sbjct: 122 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNC 178
Query: 609 LLD---KDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSF 665
           LL         KI DFGMAR         K    +    +M PE   +G+F+ K+D +SF
Sbjct: 179 LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF 238
Query: 666 GVLLLETLS 674
           GVLL E  S
Sbjct: 239 GVLLWEIFS 247

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 21/206 (10%)
Query: 481 NKLGEGGFGPVYKGRLL-----NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR 535
            +LG+G FG V   R        G+ VAVK+L   + +   +F+ EI+++  LQH N+V+
Sbjct: 21  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 80
Query: 536 XXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIE------GIAQGLLY 589
                                 +++  + S ++ L     R+  I+       I +G+ Y
Sbjct: 81  YKGVCYSAGRRNLKLI------MEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 134
Query: 590 LHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRI-VGTYGYMSP 648
           L      R IHRDL   NIL++ +   KI DFG+ ++   D+   K K        + +P
Sbjct: 135 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 191
Query: 649 EYAQQGLFSIKSDVFSFGVLLLETLS 674
           E   +  FS+ SDV+SFGV+L E  +
Sbjct: 192 ESLTESKFSVASDVWSFGVVLYELFT 217

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 19/203 (9%)
Query: 483 LGEGGFGPVYKGRLLNGQ-EVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXXX 541
           LG+G +G VY GR L+ Q  +A+K +  +  +  +    EI L   L+H+N+V+      
Sbjct: 16  LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 542 XXXXXXXXXXXMPNKSLDFFLFD-----STKENLLGWGTRVRIIEGIAQGLLYLHQYSRL 596
                      +P  SL   L          E  +G+ T+      I +GL YLH     
Sbjct: 76  ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ-----ILEGLKYLHDN--- 127
Query: 597 RVIHRDLKASNILLDKDMNP-KISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGL 655
           +++HRD+K  N+L++      KISDFG ++   G  +   T+   GT  YM+PE   +G 
Sbjct: 128 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG--INPCTETFTGTLQYMAPEIIDKGP 185
Query: 656 --FSIKSDVFSFGVLLLETLSSK 676
             +   +D++S G  ++E  + K
Sbjct: 186 RGYGKAADIWSLGCTIIEMATGK 208

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 101/223 (45%), Gaps = 21/223 (9%)
Query: 481 NKLGEGGFGPVYKGRLL-----NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR 535
            +LG+G FG V   R        G+ VAVK+L   + +   +F+ EI+++  LQH N+V+
Sbjct: 22  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 81
Query: 536 XXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIE------GIAQGLLY 589
                                 +++  + S ++ L     R+  I+       I +G+ Y
Sbjct: 82  YKGVCYSAGRRNLKLI------MEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 135
Query: 590 LHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRI-VGTYGYMSP 648
           L      R IHRDL   NIL++ +   KI DFG+ ++   D+   K K        + +P
Sbjct: 136 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 192
Query: 649 EYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLG 691
           E   +  FS+ SDV+SFGV+L E  +    +       + ++G
Sbjct: 193 ESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIG 235

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 21/206 (10%)
Query: 481 NKLGEGGFGPVYKGRLL-----NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR 535
            +LG+G FG V   R        G+ VAVK+L   + +   +F+ EI+++  LQH N+V+
Sbjct: 19  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 536 XXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIE------GIAQGLLY 589
                                 +++  + S ++ L     R+  I+       I +G+ Y
Sbjct: 79  YKGVCYSAGRRNLKLI------MEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 132
Query: 590 LHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRI-VGTYGYMSP 648
           L      R IHRDL   NIL++ +   KI DFG+ ++   D+   K K        + +P
Sbjct: 133 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 189
Query: 649 EYAQQGLFSIKSDVFSFGVLLLETLS 674
           E   +  FS+ SDV+SFGV+L E  +
Sbjct: 190 ESLTESKFSVASDVWSFGVVLYELFT 215

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 101/223 (45%), Gaps = 21/223 (9%)
Query: 481 NKLGEGGFGPVYKGRLL-----NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR 535
            +LG+G FG V   R        G+ VAVK+L   + +   +F+ EI+++  LQH N+V+
Sbjct: 47  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 536 XXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIE------GIAQGLLY 589
                                 +++  + S ++ L     R+  I+       I +G+ Y
Sbjct: 107 YKGVCYSAGRRNLKLI------MEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 160
Query: 590 LHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRI-VGTYGYMSP 648
           L      R IHRDL   NIL++ +   KI DFG+ ++   D+   K K        + +P
Sbjct: 161 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 217
Query: 649 EYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLG 691
           E   +  FS+ SDV+SFGV+L E  +    +       + ++G
Sbjct: 218 ESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIG 260

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 94/213 (44%), Gaps = 17/213 (7%)
Query: 476 NFSTENKLGEGGFGPVYKGRL------LNGQEVAVKRLSS-QSGQGQEEFKNEIKLIAKL 528
           N +    LG G FG VY+G++       +  +VAVK L    S Q + +F  E  +I+K 
Sbjct: 46  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKF 105
Query: 529 QHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDS----TKENLLGWGTRVRIIEGIA 584
            H+N+VR                 M    L  FL ++    ++ + L     + +   IA
Sbjct: 106 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 165
Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLD---KDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            G  YL +      IHRD+ A N LL         KI DFGMAR         K    + 
Sbjct: 166 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 222
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
              +M PE   +G+F+ K+D +SFGVLL E  S
Sbjct: 223 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 21/206 (10%)
Query: 481 NKLGEGGFGPVYKGRLL-----NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR 535
            +LG+G FG V   R        G+ VAVK+L   + +   +F+ EI+++  LQH N+V+
Sbjct: 23  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 82
Query: 536 XXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIE------GIAQGLLY 589
                                 +++  + S ++ L     R+  I+       I +G+ Y
Sbjct: 83  YKGVCYSAGRRNLKLI------MEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 136
Query: 590 LHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRI-VGTYGYMSP 648
           L      R IHRDL   NIL++ +   KI DFG+ ++   D+   K K        + +P
Sbjct: 137 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 193
Query: 649 EYAQQGLFSIKSDVFSFGVLLLETLS 674
           E   +  FS+ SDV+SFGV+L E  +
Sbjct: 194 ESLTESKFSVASDVWSFGVVLYELFT 219

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 94/213 (44%), Gaps = 17/213 (7%)
Query: 476 NFSTENKLGEGGFGPVYKGRL------LNGQEVAVKRLSSQ-SGQGQEEFKNEIKLIAKL 528
           N +    LG G FG VY+G++       +  +VAVK L    S Q + +F  E  +I+K 
Sbjct: 48  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 107
Query: 529 QHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDS----TKENLLGWGTRVRIIEGIA 584
            H+N+VR                 M    L  FL ++    ++ + L     + +   IA
Sbjct: 108 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 167
Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLD---KDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            G  YL +      IHRD+ A N LL         KI DFGMAR         K    + 
Sbjct: 168 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 224
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
              +M PE   +G+F+ K+D +SFGVLL E  S
Sbjct: 225 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 100/230 (43%), Gaps = 30/230 (13%)
Query: 480 ENKLGEGGFGPVYKGRLLN------GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNL 533
           + +LGEG FG V+     N         VAVK L   +   +++F+ E +L+  LQH ++
Sbjct: 20  KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI 79
Query: 534 VRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENL-------------LGWGTRVRII 580
           V+                 M +  L+ FL     + +             LG    + I 
Sbjct: 80  VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIV 640
             IA G++YL   +    +HRDL   N L+  ++  KI DFGM+R    D   +   R+ 
Sbjct: 140 SQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR----DVYSTDYYRVG 192
Query: 641 G----TYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNS 686
           G       +M PE      F+ +SDV+SFGV+L E  +  +   F  +N+
Sbjct: 193 GHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT 242

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/331 (24%), Positives = 138/331 (41%), Gaps = 53/331 (16%)
Query: 452 AANSRTRDSWFPMFSLASVSAATANFSTENKLGEGGFGPVY----KGRLLNGQE--VAVK 505
           AA+    D W           A    +   +LG+G FG VY    KG + +  E  VA+K
Sbjct: 11  AADVYVPDEW---------EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIK 61
Query: 506 RLSSQSGQGQE-EFKNEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFD 564
            ++  +   +  EF NE  ++ +    ++VR                 M    L  +L  
Sbjct: 62  TVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 121
Query: 565 ----STKENLLGWGTRVRIIE---GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPK 617
                    +L   +  ++I+    IA G+ YL+     + +HRDL A N ++ +D   K
Sbjct: 122 LRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVK 178
Query: 618 ISDFGMAR-IFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLE--TLS 674
           I DFGM R I+  D  +   K ++    +MSPE  + G+F+  SDV+SFGV+L E  TL+
Sbjct: 179 IGDFGMTRDIYETDYYRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 237
Query: 675 SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDA 734
            +     SN   L  +     L K D   +++   ++                +C Q + 
Sbjct: 238 EQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMR----------------MCWQYNP 281
Query: 735 ADRPTMFEVVSMLTNKTINLPHPRQPAFSSI 765
             RP+  E++S +  +        +P F  +
Sbjct: 282 KMRPSFLEIISSIKEEM-------EPGFREV 305

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 21/206 (10%)
Query: 481 NKLGEGGFGPVYKGRLL-----NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR 535
            +LG+G FG V   R        G+ VAVK+L   + +   +F+ EI+++  LQH N+V+
Sbjct: 34  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 536 XXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIE------GIAQGLLY 589
                                 +++  + S ++ L     R+  I+       I +G+ Y
Sbjct: 94  YKGVCYSAGRRNLKLI------MEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 147
Query: 590 LHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRI-VGTYGYMSP 648
           L      R IHRDL   NIL++ +   KI DFG+ ++   D+   K K        + +P
Sbjct: 148 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 204
Query: 649 EYAQQGLFSIKSDVFSFGVLLLETLS 674
           E   +  FS+ SDV+SFGV+L E  +
Sbjct: 205 ESLTESKFSVASDVWSFGVVLYELFT 230

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 101/219 (46%), Gaps = 19/219 (8%)
Query: 464 MFSLASVSAATANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQ---GQEEFK 519
           MF   S +  +  +  +  LG+G FG V   +  + GQE AVK +S +  +    +E   
Sbjct: 21  MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 80
Query: 520 NEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDST-KENLLGWGTRVR 578
            E++L+ +L H N+++                      L    FD              R
Sbjct: 81  REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAAR 136
Query: 579 IIEGIAQGLLYLHQYSRLRVIHRDLKASNILLD---KDMNPKISDFGMARIFGGDELQSK 635
           II  +  G+ Y+H   + +++HRDLK  N+LL+   KD N +I DFG++  F   E   K
Sbjct: 137 IIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKK 190
Query: 636 TKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
            K  +GT  Y++PE    G +  K DV+S GV+L   LS
Sbjct: 191 MKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLS 228

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 107/249 (42%), Gaps = 25/249 (10%)
Query: 448 KGNKAANSRTRDSWFPMFSLASVSAATA--------NFSTENKLGEGGFGPVYKGRL--- 496
           K +K   S     + P +S A  +++ +        N +    LG G FG VY+G++   
Sbjct: 22  KLSKLRTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGM 81
Query: 497 ---LNGQEVAVKRLSSQ-SGQGQEEFKNEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXX 552
               +  +VAVK L    S Q + +F  E  +I+K  H+N+VR                 
Sbjct: 82  PNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLEL 141
Query: 553 MPNKSLDFFLFDS----TKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNI 608
           M    L  FL ++    ++ + L     + +   IA G  YL +      IHRD+ A N 
Sbjct: 142 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNC 198
Query: 609 LLD---KDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSF 665
           LL         KI DFGMAR         K    +    +M PE   +G+F+ K+D +SF
Sbjct: 199 LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF 258
Query: 666 GVLLLETLS 674
           GVLL E  S
Sbjct: 259 GVLLWEIFS 267

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 21/206 (10%)
Query: 481 NKLGEGGFGPVYKGRLL-----NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR 535
            +LG+G FG V   R        G+ VAVK+L   + +   +F+ EI+++  LQH N+V+
Sbjct: 34  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 536 XXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIE------GIAQGLLY 589
                                 +++  + S ++ L     R+  I+       I +G+ Y
Sbjct: 94  YKGVCYSAGRRNLKLI------MEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 147
Query: 590 LHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRI-VGTYGYMSP 648
           L      R IHRDL   NIL++ +   KI DFG+ ++   D+   K K        + +P
Sbjct: 148 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 204
Query: 649 EYAQQGLFSIKSDVFSFGVLLLETLS 674
           E   +  FS+ SDV+SFGV+L E  +
Sbjct: 205 ESLTESKFSVASDVWSFGVVLYELFT 230

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/331 (24%), Positives = 138/331 (41%), Gaps = 53/331 (16%)
Query: 452 AANSRTRDSWFPMFSLASVSAATANFSTENKLGEGGFGPVY----KGRLLNGQE--VAVK 505
           AA+    D W           A    +   +LG+G FG VY    KG + +  E  VA+K
Sbjct: 1   AADVYVPDEW---------EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIK 51
Query: 506 RLSSQSGQGQE-EFKNEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFD 564
            ++  +   +  EF NE  ++ +    ++VR                 M    L  +L  
Sbjct: 52  TVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 111
Query: 565 ----STKENLLGWGTRVRIIE---GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPK 617
                    +L   +  ++I+    IA G+ YL+     + +HRDL A N ++ +D   K
Sbjct: 112 LRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVK 168
Query: 618 ISDFGMAR-IFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLE--TLS 674
           I DFGM R I+  D  +   K ++    +MSPE  + G+F+  SDV+SFGV+L E  TL+
Sbjct: 169 IGDFGMTRDIYETDYYRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 227
Query: 675 SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDA 734
            +     SN   L  +     L K D   +++   ++                +C Q + 
Sbjct: 228 EQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMR----------------MCWQYNP 271
Query: 735 ADRPTMFEVVSMLTNKTINLPHPRQPAFSSI 765
             RP+  E++S +  +        +P F  +
Sbjct: 272 KMRPSFLEIISSIKEEM-------EPGFREV 295

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 94/213 (44%), Gaps = 17/213 (7%)
Query: 476 NFSTENKLGEGGFGPVYKGRL------LNGQEVAVKRLSSQ-SGQGQEEFKNEIKLIAKL 528
           N +    LG G FG VY+G++       +  +VAVK L    S Q + +F  E  +I+K 
Sbjct: 49  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 108
Query: 529 QHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDS----TKENLLGWGTRVRIIEGIA 584
            H+N+VR                 M    L  FL ++    ++ + L     + +   IA
Sbjct: 109 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 168
Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLD---KDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            G  YL +      IHRD+ A N LL         KI DFGMAR         K    + 
Sbjct: 169 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAML 225
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
              +M PE   +G+F+ K+D +SFGVLL E  S
Sbjct: 226 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 101/219 (46%), Gaps = 19/219 (8%)
Query: 464 MFSLASVSAATANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQ---GQEEFK 519
           MF   S +  +  +  +  LG+G FG V   +  + GQE AVK +S +  +    +E   
Sbjct: 15  MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 74
Query: 520 NEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDST-KENLLGWGTRVR 578
            E++L+ +L H N+++                      L    FD              R
Sbjct: 75  REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAAR 130
Query: 579 IIEGIAQGLLYLHQYSRLRVIHRDLKASNILLD---KDMNPKISDFGMARIFGGDELQSK 635
           II  +  G+ Y+H+    +++HRDLK  N+LL+   KD N +I DFG++  F   E   K
Sbjct: 131 IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKK 184
Query: 636 TKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
            K  +GT  Y++PE    G +  K DV+S GV+L   LS
Sbjct: 185 MKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLS 222

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 94/213 (44%), Gaps = 17/213 (7%)
Query: 476 NFSTENKLGEGGFGPVYKGRL------LNGQEVAVKRLSSQ-SGQGQEEFKNEIKLIAKL 528
           N +    LG G FG VY+G++       +  +VAVK L    S Q + +F  E  +I+K 
Sbjct: 72  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 131
Query: 529 QHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDS----TKENLLGWGTRVRIIEGIA 584
            H+N+VR                 M    L  FL ++    ++ + L     + +   IA
Sbjct: 132 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 191
Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLD---KDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            G  YL +      IHRD+ A N LL         KI DFGMAR         K    + 
Sbjct: 192 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAML 248
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
              +M PE   +G+F+ K+D +SFGVLL E  S
Sbjct: 249 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 135/312 (43%), Gaps = 44/312 (14%)
Query: 471 SAATANFSTENKLGEGGFGPVY----KGRLLNGQE--VAVKRLSSQSGQGQE-EFKNEIK 523
             A    +   +LG+G FG VY    KG + +  E  VA+K ++  +   +  EF NE  
Sbjct: 8   EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 67
Query: 524 LIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFL--FDSTKEN--LLGWGTRVRI 579
           ++ +    ++VR                 M    L  +L       EN  +L   +  ++
Sbjct: 68  VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 127
Query: 580 IE---GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGDELQSK 635
           I+    IA G+ YL+     + +HRDL A N  + +D   KI DFGM R I+  D  +  
Sbjct: 128 IQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKG 184
Query: 636 TKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHA 693
            K ++    +MSPE  + G+F+  SDV+SFGV+L E  TL+ +     SN   L  +   
Sbjct: 185 GKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG 243
Query: 694 WDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTIN 753
             L K D   +++          L L R      +C Q +   RP+  E++S +  +   
Sbjct: 244 GLLDKPDNCPDML----------LELMR------MCWQYNPKMRPSFLEIISSIKEEM-- 285
Query: 754 LPHPRQPAFSSI 765
                +P F  +
Sbjct: 286 -----EPGFREV 292

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 106/216 (49%), Gaps = 33/216 (15%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRN 532
           NF    K+GEG +G VYK R  L G+ VA+K  RL +++         EI L+ +L H N
Sbjct: 3   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGW-------GTRVRIIEG--- 582
           +V+                   NK   + +F+   ++L  +       G  + +I+    
Sbjct: 63  IVKLLDVIHTE-----------NKL--YLVFEHVHQDLKTFMDASALTGIPLPLIKSYLF 109
Query: 583 -IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            + QGL + H +   RV+HRDLK  N+L++ +   K++DFG+AR FG   +++ T  +V 
Sbjct: 110 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV- 164
Query: 642 TYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSK 676
           T  Y +PE       +S   D++S G +  E ++ +
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 126/291 (43%), Gaps = 40/291 (13%)
Query: 483 LGEGGFG--------PVYKGRLLNGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNL 533
           LGEG FG        P   G    G+ VAVK L +  G Q +  +K EI ++  L H ++
Sbjct: 22  LGEGHFGKVSLYCYDPTNDG---TGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 534 VRXXX--XXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH 591
           ++                   +P  SL  +L      + +G    +   + I +G+ YLH
Sbjct: 79  IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL----PRHSIGLAQLLLFAQQICEGMAYLH 134
Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGDELQSKTKRIVGTYGYMSPEY 650
                  IHR+L A N+LLD D   KI DFG+A+ +  G E     +       + +PE 
Sbjct: 135 SQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 191
Query: 651 AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID--- 707
            ++  F   SDV+SFGV L E L+   ++    T  L L+G A       R  EL++   
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGE 251
Query: 708 -----PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTIN 753
                     E  +L+ N        C + +A+ RPT   ++ +L  KT++
Sbjct: 252 RLPRPDKCPCEVYHLMKN--------CWETEASFRPTFENLIPIL--KTVH 292

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 125/291 (42%), Gaps = 40/291 (13%)
Query: 483 LGEGGFG--------PVYKGRLLNGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNL 533
           LGEG FG        P   G    G+ VAVK L +  G Q +  +K EI ++  L H ++
Sbjct: 22  LGEGHFGKVSLYCYDPTNDG---TGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 534 VRXXX--XXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH 591
           ++                   +P  SL     D    + +G    +   + I +G+ YLH
Sbjct: 79  IKYKGCCEDQGEKSLQLVMEYVPLGSLR----DYLPRHSIGLAQLLLFAQQICEGMAYLH 134
Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGDELQSKTKRIVGTYGYMSPEY 650
                  IHR+L A N+LLD D   KI DFG+A+ +  G E     +       + +PE 
Sbjct: 135 AQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 191
Query: 651 AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID--- 707
            ++  F   SDV+SFGV L E L+   ++    T  L L+G A       R  EL++   
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGE 251
Query: 708 -----PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTIN 753
                     E  +L+ N        C + +A+ RPT   ++ +L  KT++
Sbjct: 252 RLPRPDKCPCEVYHLMKN--------CWETEASFRPTFENLIPIL--KTVH 292

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 96/204 (47%), Gaps = 20/204 (9%)
Query: 483 LGEGGFGPVYKGRLL-----NGQEVAVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNLVRX 536
           LGEG FG V   R        G++VAVK L  +SG     + K EI+++  L H N+V+ 
Sbjct: 29  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 537 XX--XXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYL--HQ 592
                             +P+ SL  +L     +N +    +++    I +G+ YL   Q
Sbjct: 89  KGICTEDGGNGIKLIMEFLPSGSLKEYL--PKNKNKINLKQQLKYAVQICKGMDYLGSRQ 146
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTK--RIVGTYGYMSPEY 650
           Y     +HRDL A N+L++ +   KI DFG+ +    D+     K  R    + Y +PE 
Sbjct: 147 Y-----VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APEC 200
Query: 651 AQQGLFSIKSDVFSFGVLLLETLS 674
             Q  F I SDV+SFGV L E L+
Sbjct: 201 LMQSKFYIASDVWSFGVTLHELLT 224

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 96/204 (47%), Gaps = 20/204 (9%)
Query: 483 LGEGGFGPVYKGRLL-----NGQEVAVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNLVRX 536
           LGEG FG V   R        G++VAVK L  +SG     + K EI+++  L H N+V+ 
Sbjct: 17  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 537 XX--XXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYL--HQ 592
                             +P+ SL  +L     +N +    +++    I +G+ YL   Q
Sbjct: 77  KGICTEDGGNGIKLIMEFLPSGSLKEYL--PKNKNKINLKQQLKYAVQICKGMDYLGSRQ 134
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTK--RIVGTYGYMSPEY 650
           Y     +HRDL A N+L++ +   KI DFG+ +    D+     K  R    + Y +PE 
Sbjct: 135 Y-----VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APEC 188
Query: 651 AQQGLFSIKSDVFSFGVLLLETLS 674
             Q  F I SDV+SFGV L E L+
Sbjct: 189 LMQSKFYIASDVWSFGVTLHELLT 212

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 11/205 (5%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRN 532
           NF    K+GEG +G VYK R  L G+ VA+K  RL +++         EI L+ +L H N
Sbjct: 4   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
           +V+                 + ++ L  F+ D++    +        +  + QGL + H 
Sbjct: 64  IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPE-YA 651
           +   RV+HRDLK  N+L++ +   K++DFG+AR FG   +++ T  +V T  Y +PE   
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILL 176
Query: 652 QQGLFSIKSDVFSFGVLLLETLSSK 676
               +S   D++S G +  E ++ +
Sbjct: 177 GXKYYSTAVDIWSLGCIFAEMVTRR 201

>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a) Kinase Domain In Complex With Dorsomorphin Length = 322

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 95/202 (47%), Gaps = 16/202 (7%)
Query: 486 GGFGPVYKGRLLNGQEVAVKRLSSQSGQG-QEEFKNEIKLIAKLQHRNLVRXXXXXXXXX 544
           G FG V+K +LLN + VAVK    Q  Q  Q E+  E+  +  ++H N+++         
Sbjct: 35  GRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQNEY--EVYSLPGMKHENILQFIGAEKRGT 91
Query: 545 XXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ-------YSRLR 597
                   +        L D  K N++ W     I E +A+GL YLH+         +  
Sbjct: 92  SVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA 151
Query: 598 VIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGL-- 655
           + HRD+K+ N+LL  ++   I+DFG+A  F   +    T   VGT  YM+PE  +  +  
Sbjct: 152 ISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINF 211
Query: 656 ---FSIKSDVFSFGVLLLETLS 674
                ++ D+++ G++L E  S
Sbjct: 212 QRDAFLRIDMYAMGLVLWELAS 233

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 94/213 (44%), Gaps = 17/213 (7%)
Query: 476 NFSTENKLGEGGFGPVYKGRL------LNGQEVAVKRLSSQ-SGQGQEEFKNEIKLIAKL 528
           N +    LG G FG VY+G++       +  +VAVK L    S Q + +F  E  +I+K 
Sbjct: 32  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 91
Query: 529 QHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDS----TKENLLGWGTRVRIIEGIA 584
            H+N+VR                 M    L  FL ++    ++ + L     + +   IA
Sbjct: 92  NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 151
Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLD---KDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            G  YL +      IHRD+ A N LL         KI DFGMA+         K    + 
Sbjct: 152 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAML 208
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
              +M PE   +G+F+ K+D +SFGVLL E  S
Sbjct: 209 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 98/227 (43%), Gaps = 19/227 (8%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLN---GQE---VAVKRLSSQSGQGQEEFKNEIKLIAKLQ 529
           N   + +LGEG FG V+     N    Q+   VAVK L   S   +++F  E +L+  LQ
Sbjct: 14  NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQ 73
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFL----------FDSTKENLLGWGTRVRI 579
           H ++V+                 M +  L+ FL           +      L     + I
Sbjct: 74  HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHI 133
Query: 580 IEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRI 639
            + IA G++YL   +    +HRDL   N L+ +++  KI DFGM+R     +        
Sbjct: 134 AQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHT 190
Query: 640 VGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNS 686
           +    +M PE      F+ +SDV+S GV+L E  +  +   +  +N+
Sbjct: 191 MLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN 237

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 101/219 (46%), Gaps = 19/219 (8%)
Query: 464 MFSLASVSAATANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQ---GQEEFK 519
           MF   S +  +  +  +  LG+G FG V   +  + GQE AVK +S +  +    +E   
Sbjct: 39  MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 98
Query: 520 NEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDST-KENLLGWGTRVR 578
            E++L+ +L H N+++                      L    FD              R
Sbjct: 99  REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAAR 154
Query: 579 IIEGIAQGLLYLHQYSRLRVIHRDLKASNILLD---KDMNPKISDFGMARIFGGDELQSK 635
           II  +  G+ Y+H+    +++HRDLK  N+LL+   KD N +I DFG++  F   E   K
Sbjct: 155 IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKK 208
Query: 636 TKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
            K  +GT  Y++PE    G +  K DV+S GV+L   LS
Sbjct: 209 MKDKIGTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLS 246

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 101/219 (46%), Gaps = 19/219 (8%)
Query: 464 MFSLASVSAATANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQ---GQEEFK 519
           MF   S +  +  +  +  LG+G FG V   +  + GQE AVK +S +  +    +E   
Sbjct: 38  MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 97
Query: 520 NEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDST-KENLLGWGTRVR 578
            E++L+ +L H N+++                      L    FD              R
Sbjct: 98  REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAAR 153
Query: 579 IIEGIAQGLLYLHQYSRLRVIHRDLKASNILLD---KDMNPKISDFGMARIFGGDELQSK 635
           II  +  G+ Y+H+    +++HRDLK  N+LL+   KD N +I DFG++  F   E   K
Sbjct: 154 IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKK 207
Query: 636 TKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
            K  +GT  Y++PE    G +  K DV+S GV+L   LS
Sbjct: 208 MKDKIGTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLS 245

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 11/205 (5%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRN 532
           NF    K+GEG +G VYK R  L G+ VA+K  RL +++         EI L+ +L H N
Sbjct: 3   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
           +V+                 + ++ L  F+ D++    +        +  + QGL + H 
Sbjct: 63  IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ 652
           +   RV+HRDLK  N+L++ +   K++DFG+AR FG   +++ T  +V T  Y +PE   
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILL 175
Query: 653 Q-GLFSIKSDVFSFGVLLLETLSSK 676
               +S   D++S G +  E ++ +
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRR 200

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 11/205 (5%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRN 532
           NF    K+GEG +G VYK R  L G+ VA+K  RL +++         EI L+ +L H N
Sbjct: 4   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
           +V+                 + ++ L  F+ D++    +        +  + QGL + H 
Sbjct: 64  IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ 652
           +   RV+HRDLK  N+L++ +   K++DFG+AR FG   +++ T  +V T  Y +PE   
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILL 176
Query: 653 Q-GLFSIKSDVFSFGVLLLETLSSK 676
               +S   D++S G +  E ++ +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 11/205 (5%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRN 532
           NF    K+GEG +G VYK R  L G+ VA+K  RL +++         EI L+ +L H N
Sbjct: 3   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
           +V+                 + ++ L  F+ D++    +        +  + QGL + H 
Sbjct: 63  IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ 652
           +   RV+HRDLK  N+L++ +   K++DFG+AR FG   +++ T  +V T  Y +PE   
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILL 175
Query: 653 Q-GLFSIKSDVFSFGVLLLETLSSK 676
               +S   D++S G +  E ++ +
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRR 200

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 21/206 (10%)
Query: 481 NKLGEGGFGPVYKGRLL-----NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR 535
            +LG+G FG V   R        G+ VAVK+L   + +   +F+ EI+++  LQH N+V+
Sbjct: 16  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 536 XXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIE------GIAQGLLY 589
                                 +++  + S ++ L     R+  I+       I +G+ Y
Sbjct: 76  YKGVCYSAGRRNLKLI------MEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 129
Query: 590 LHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRI-VGTYGYMSP 648
           L      R IHRDL   NIL++ +   KI DFG+ ++   D+   K K        + +P
Sbjct: 130 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAP 186
Query: 649 EYAQQGLFSIKSDVFSFGVLLLETLS 674
           E   +  FS+ SDV+SFGV+L E  +
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFT 212

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 11/205 (5%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRN 532
           NF    K+GEG +G VYK R  L G+ VA+K  RL +++         EI L+ +L H N
Sbjct: 8   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 67
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
           +V+                 + ++ L  F+ D++    +        +  + QGL + H 
Sbjct: 68  IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ 652
           +   RV+HRDLK  N+L++ +   K++DFG+AR FG   +++ T  +V T  Y +PE   
Sbjct: 126 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILL 180
Query: 653 Q-GLFSIKSDVFSFGVLLLETLSSK 676
               +S   D++S G +  E ++ +
Sbjct: 181 GCKYYSTAVDIWSLGCIFAEMVTRR 205

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 73.6 bits (179), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 11/205 (5%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRN 532
           NF    K+GEG +G VYK R  L G+ VA+K  RL +++         EI L+ +L H N
Sbjct: 5   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
           +V+                 + ++ L  F+ D++    +        +  + QGL + H 
Sbjct: 65  IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ 652
           +   RV+HRDLK  N+L++ +   K++DFG+AR FG   +++ T  +V T  Y +PE   
Sbjct: 123 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILL 177
Query: 653 Q-GLFSIKSDVFSFGVLLLETLSSK 676
               +S   D++S G +  E ++ +
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRR 202

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 11/205 (5%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRN 532
           NF    K+GEG +G VYK R  L G+ VA+K  RL +++         EI L+ +L H N
Sbjct: 11  NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
           +V+                 + ++ L  F+ D++    +        +  + QGL + H 
Sbjct: 71  IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPE-YA 651
           +   RV+HRDLK  N+L++ +   K++DFG+AR FG   +++ T  +V T  Y +PE   
Sbjct: 129 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILL 183
Query: 652 QQGLFSIKSDVFSFGVLLLETLSSK 676
               +S   D++S G +  E ++ +
Sbjct: 184 GXKYYSTAVDIWSLGCIFAEMVTRR 208

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 11/205 (5%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRN 532
           NF    K+GEG +G VYK R  L G+ VA+K  RL +++         EI L+ +L H N
Sbjct: 4   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
           +V+                 + ++ L  F+ D++    +        +  + QGL + H 
Sbjct: 64  IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ 652
           +   RV+HRDLK  N+L++ +   K++DFG+AR FG   +++ T  +V T  Y +PE   
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILL 176
Query: 653 Q-GLFSIKSDVFSFGVLLLETLSSK 676
               +S   D++S G +  E ++ +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 11/205 (5%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRN 532
           NF    K+GEG +G VYK R  L G+ VA+K  RL +++         EI L+ +L H N
Sbjct: 11  NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
           +V+                 + ++ L  F+ D++    +        +  + QGL + H 
Sbjct: 71  IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ 652
           +   RV+HRDLK  N+L++ +   K++DFG+AR FG   +++ T  +V T  Y +PE   
Sbjct: 129 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILL 183
Query: 653 Q-GLFSIKSDVFSFGVLLLETLSSK 676
               +S   D++S G +  E ++ +
Sbjct: 184 GCKYYSTAVDIWSLGCIFAEMVTRR 208

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 97/220 (44%), Gaps = 20/220 (9%)
Query: 465 FSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKL 524
             L+++      F     +G G +G VYKGR +   ++A  ++   +G  +EE K EI +
Sbjct: 14  IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINM 73
Query: 525 IAKL-QHRNL-------VRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTR 576
           + K   HRN+       ++                       D  L  +TK N L     
Sbjct: 74  LKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTD--LIKNTKGNTLKEEWI 131
Query: 577 VRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKT 636
             I   I +GL +LHQ+   +VIHRD+K  N+LL ++   K+ DFG++     D    + 
Sbjct: 132 AYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQL--DRTVGRR 186
Query: 637 KRIVGTYGYMSPEYAQ-----QGLFSIKSDVFSFGVLLLE 671
              +GT  +M+PE           +  KSD++S G+  +E
Sbjct: 187 NTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIE 226

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRN 532
           NF    K+GEG +G VYK R  L G+ VA+K  RL +++         EI L+ +L H N
Sbjct: 4   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
           +V+                 +     DF   D++    +        +  + QGL + H 
Sbjct: 64  IVKLLDVIHTENKLYLVFEFLHQDLKDFM--DASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ 652
           +   RV+HRDLK  N+L++ +   K++DFG+AR FG   +++    +V T  Y +PE   
Sbjct: 122 H---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILL 176
Query: 653 Q-GLFSIKSDVFSFGVLLLETLSSK 676
               +S   D++S G +  E ++ +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 73.2 bits (178), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 115/266 (43%), Gaps = 35/266 (13%)
Query: 481 NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
            +LG G FG V  G+     +VA+K +   S   ++EF  E K++  L H  LV+     
Sbjct: 14  KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 72
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTR--VRIIEGIAQGLLYLHQYSRLRV 598
                       M N  L  +L    +E    + T+  + + + + + + YL      + 
Sbjct: 73  TKQRPIFIITEYMANGCLLNYL----REMRHRFQTQQLLEMCKDVCEAMEYLESK---QF 125
Query: 599 IHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT---YGYMSPEYAQQGL 655
           +HRDL A N L++     K+SDFG++R    DE  S     VG+     +  PE      
Sbjct: 126 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS----VGSKFPVRWSPPEVLMYSK 181
Query: 656 FSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNE 713
           FS KSD+++FGVL+ E  +L       F+N+ +   +     L++         P L +E
Sbjct: 182 FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR---------PHLASE 232
Query: 714 ASYLILNRYINVGLLCVQEDAADRPT 739
             Y I+         C  E A +RPT
Sbjct: 233 KVYTIMYS-------CWHEKADERPT 251

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 115/266 (43%), Gaps = 35/266 (13%)
Query: 481 NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
            +LG G FG V  G+     +VA+K +   S   ++EF  E K++  L H  LV+     
Sbjct: 10  KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 68
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTR--VRIIEGIAQGLLYLHQYSRLRV 598
                       M N  L  +L    +E    + T+  + + + + + + YL      + 
Sbjct: 69  TKQRPIFIITEYMANGCLLNYL----REMRHRFQTQQLLEMCKDVCEAMEYLESK---QF 121
Query: 599 IHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT---YGYMSPEYAQQGL 655
           +HRDL A N L++     K+SDFG++R    DE  S     VG+     +  PE      
Sbjct: 122 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS----VGSKFPVRWSPPEVLMYSK 177
Query: 656 FSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNE 713
           FS KSD+++FGVL+ E  +L       F+N+ +   +     L++         P L +E
Sbjct: 178 FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR---------PHLASE 228
Query: 714 ASYLILNRYINVGLLCVQEDAADRPT 739
             Y I+         C  E A +RPT
Sbjct: 229 KVYTIMYS-------CWHEKADERPT 247

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRN 532
           NF    K+GEG +G VYK R  L G+ VA+K  RL +++         EI L+ +L H N
Sbjct: 6   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
           +V+                 +     DF   D++    +        +  + QGL + H 
Sbjct: 66  IVKLLDVIHTENKLYLVFEFLSMDLKDFM--DASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ 652
           +   RV+HRDLK  N+L++ +   K++DFG+AR FG   +++    +V T  Y +PE   
Sbjct: 124 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILL 178
Query: 653 Q-GLFSIKSDVFSFGVLLLETLSSK 676
               +S   D++S G +  E ++ +
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRR 203

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 11/205 (5%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRN 532
           NF    K+GEG +G VYK R  L G+ VA+K  RL +++         EI L+ +L H N
Sbjct: 4   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
           +V+                 + ++ L  F+ D++    +        +  + QGL + H 
Sbjct: 64  IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLSFCHS 121
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ 652
           +   RV+HRDLK  N+L++ +   K++DFG+AR FG   +++ T  +V T  Y +PE   
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILL 176
Query: 653 Q-GLFSIKSDVFSFGVLLLETLSSK 676
               +S   D++S G +  E ++ +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 115/266 (43%), Gaps = 35/266 (13%)
Query: 481 NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
            +LG G FG V  G+     +VA+K +   S   ++EF  E K++  L H  LV+     
Sbjct: 15  KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTR--VRIIEGIAQGLLYLHQYSRLRV 598
                       M N  L  +L    +E    + T+  + + + + + + YL      + 
Sbjct: 74  TKQRPIFIITEYMANGCLLNYL----REMRHRFQTQQLLEMCKDVCEAMEYLESK---QF 126
Query: 599 IHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT---YGYMSPEYAQQGL 655
           +HRDL A N L++     K+SDFG++R    DE  S     VG+     +  PE      
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS----VGSKFPVRWSPPEVLMYSK 182
Query: 656 FSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNE 713
           FS KSD+++FGVL+ E  +L       F+N+ +   +     L++         P L +E
Sbjct: 183 FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR---------PHLASE 233
Query: 714 ASYLILNRYINVGLLCVQEDAADRPT 739
             Y I+         C  E A +RPT
Sbjct: 234 KVYTIMYS-------CWHEKADERPT 252

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 115/266 (43%), Gaps = 35/266 (13%)
Query: 481 NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
            +LG G FG V  G+     +VA+K +   S   ++EF  E K++  L H  LV+     
Sbjct: 21  KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 79
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTR--VRIIEGIAQGLLYLHQYSRLRV 598
                       M N  L  +L    +E    + T+  + + + + + + YL      + 
Sbjct: 80  TKQRPIFIITEYMANGCLLNYL----REMRHRFQTQQLLEMCKDVCEAMEYLESK---QF 132
Query: 599 IHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT---YGYMSPEYAQQGL 655
           +HRDL A N L++     K+SDFG++R    DE  S     VG+     +  PE      
Sbjct: 133 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS----VGSKFPVRWSPPEVLMYSK 188
Query: 656 FSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNE 713
           FS KSD+++FGVL+ E  +L       F+N+ +   +     L++         P L +E
Sbjct: 189 FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR---------PHLASE 239
Query: 714 ASYLILNRYINVGLLCVQEDAADRPT 739
             Y I+         C  E A +RPT
Sbjct: 240 KVYTIMYS-------CWHEKADERPT 258

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 115/266 (43%), Gaps = 35/266 (13%)
Query: 481 NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
            +LG G FG V  G+     +VA+K +   S   ++EF  E K++  L H  LV+     
Sbjct: 30  KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTR--VRIIEGIAQGLLYLHQYSRLRV 598
                       M N  L  +L    +E    + T+  + + + + + + YL      + 
Sbjct: 89  TKQRPIFIITEYMANGCLLNYL----REMRHRFQTQQLLEMCKDVCEAMEYLESK---QF 141
Query: 599 IHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT---YGYMSPEYAQQGL 655
           +HRDL A N L++     K+SDFG++R    DE  S     VG+     +  PE      
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS----VGSKFPVRWSPPEVLMYSK 197
Query: 656 FSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNE 713
           FS KSD+++FGVL+ E  +L       F+N+ +   +     L++         P L +E
Sbjct: 198 FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR---------PHLASE 248
Query: 714 ASYLILNRYINVGLLCVQEDAADRPT 739
             Y I+         C  E A +RPT
Sbjct: 249 KVYTIMYS-------CWHEKADERPT 267

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRN 532
           NF    K+GEG +G VYK R  L G+ VA+K  RL +++         EI L+ +L H N
Sbjct: 7   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
           +V+                 +     DF   D++    +        +  + QGL + H 
Sbjct: 67  IVKLLDVIHTENKLYLVFEFLSMDLKDFM--DASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ 652
           +   RV+HRDLK  N+L++ +   K++DFG+AR FG   +++    +V T  Y +PE   
Sbjct: 125 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILL 179
Query: 653 Q-GLFSIKSDVFSFGVLLLETLSSK 676
               +S   D++S G +  E ++ +
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRR 204

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 72.8 bits (177), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 21/223 (9%)
Query: 481 NKLGEGGFGPVYKGRLL-----NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR 535
            +LG+G FG V   R        G+ VAVK+L   + +   +F+ EI+++  LQH N+V+
Sbjct: 17  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 76
Query: 536 XXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIE------GIAQGLLY 589
                                 +++  + S ++ L     R+  I+       I +G+ Y
Sbjct: 77  YKGVCYSAGRRNLKLI------MEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 130
Query: 590 LHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRI-VGTYGYMSP 648
           L      R IHR+L   NIL++ +   KI DFG+ ++   D+   K K        + +P
Sbjct: 131 L---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAP 187
Query: 649 EYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLG 691
           E   +  FS+ SDV+SFGV+L E  +    +       + ++G
Sbjct: 188 ESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIG 230

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 72.4 bits (176), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 13/198 (6%)
Query: 481 NKLGEGGFGPVY--KGRLLNGQEVAVKRLSSQSGQGQE---EFKNEIKLIAKLQHRNLVR 535
           +KLG GG   VY  +  +LN + VA+K +     + +E    F+ E+   ++L H+N+V 
Sbjct: 17  DKLGGGGMSTVYLAEDTILNIK-VAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 536 XXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSR 595
                            +   +L  ++        L   T +     I  G+ + H    
Sbjct: 76  MIDVDEEDDCYYLVMEYIEGPTLSEYI---ESHGPLSVDTAINFTNQILDGIKHAHD--- 129
Query: 596 LRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGL 655
           +R++HRD+K  NIL+D +   KI DFG+A+      L ++T  ++GT  Y SPE A+   
Sbjct: 130 MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL-TQTNHVLGTVQYFSPEQAKGEA 188
Query: 656 FSIKSDVFSFGVLLLETL 673
               +D++S G++L E L
Sbjct: 189 TDECTDIYSIGIVLYEML 206

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 72.4 bits (176), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 119/285 (41%), Gaps = 38/285 (13%)
Query: 483 LGEGGFG--------PVYKGRLLNGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNL 533
           LGEG FG        P   G    G+ VAVK L    G Q +  ++ EI+++  L H ++
Sbjct: 17  LGEGHFGKVSLYCYDPTNDG---TGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 73
Query: 534 VRXX--XXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH 591
           V+                   +P  SL     D    + +G    +   + I +G+ YLH
Sbjct: 74  VKYKGCCEDQGEKSVQLVMEYVPLGSLR----DYLPRHCVGLAQLLLFAQQICEGMAYLH 129
Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGDELQSKTKRIVGTYGYMSPEY 650
                  IHR L A N+LLD D   KI DFG+A+ +  G E     +       + +PE 
Sbjct: 130 AQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 186
Query: 651 AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID--- 707
            ++  F   SDV+SFGV L E L+   +    +T    L+GH        R  EL++   
Sbjct: 187 LKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGE 246
Query: 708 -----PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML 747
                     E  +L+ N        C + +A+ RPT   +V +L
Sbjct: 247 RLPRPDRCPCEIYHLMKN--------CWETEASFRPTFQNLVPIL 283

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 72.4 bits (176), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 120/273 (43%), Gaps = 29/273 (10%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
           + + ++KLG G +G VY+G        VAVK L   + +  EEF  E  ++ +++H NLV
Sbjct: 19  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
           +                 M   +L  +L +  ++ +      + +   I+  + YL    
Sbjct: 78  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 133
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG 654
           +   IHRDL A N L+ ++   K++DFG++R+  GD   +          + +PE     
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 192
Query: 655 LFSIKSDVFSFGVLLLET----LSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL 710
            FSIKSDV++FGVLL E     +S     D S    L        L KD R   +  P  
Sbjct: 193 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL--------LEKDYR---MERPEG 241
Query: 711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEV 743
             E  Y ++         C Q + +DRP+  E+
Sbjct: 242 CPEKVYELMRA-------CWQWNPSDRPSFAEI 267

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 72.4 bits (176), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 128/292 (43%), Gaps = 44/292 (15%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQE-VAVKRLSSQSGQ-GQEEFKNEIKLIAKLQHRNL 533
           ++  +  +G G    V        +E VA+KR++ +  Q   +E   EI+ +++  H N+
Sbjct: 11  DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 70
Query: 534 VRXXXXXXXXXXXXXXXXXMPNKS-LDFFLF----DSTKENLLGWGTRVRIIEGIAQGLL 588
           V                  +   S LD           K  +L   T   I+  + +GL 
Sbjct: 71  VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLE 130
Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF--GGDELQSKTKR-IVGTYGY 645
           YLH+  +   IHRD+KA NILL +D + +I+DFG++     GGD  ++K ++  VGT  +
Sbjct: 131 YLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCW 187
Query: 646 MSPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWE 704
           M+PE  +Q   +  K+D++SFG+  +E  +            + +L              
Sbjct: 188 MAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLML-------------- 233
Query: 705 LIDPTLQNEASYL--------ILNRY----INVGLLCVQEDAADRPTMFEVV 744
               TLQN+   L        +L +Y      +  LC+Q+D   RPT  E++
Sbjct: 234 ----TLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 281

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 72.4 bits (176), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 120/273 (43%), Gaps = 29/273 (10%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
           + + ++KLG G +G VY+G        VAVK L   + +  EEF  E  ++ +++H NLV
Sbjct: 14  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
           +                 M   +L  +L +  ++ +      + +   I+  + YL    
Sbjct: 73  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 128
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG 654
           +   IHRDL A N L+ ++   K++DFG++R+  GD   +          + +PE     
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 187
Query: 655 LFSIKSDVFSFGVLLLET----LSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL 710
            FSIKSDV++FGVLL E     +S     D S    L        L KD R   +  P  
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL--------LEKDYR---MERPEG 236
Query: 711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEV 743
             E  Y ++         C Q + +DRP+  E+
Sbjct: 237 CPEKVYELMRA-------CWQWNPSDRPSFAEI 262

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 119/285 (41%), Gaps = 38/285 (13%)
Query: 483 LGEGGFG--------PVYKGRLLNGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNL 533
           LGEG FG        P   G    G+ VAVK L    G Q +  ++ EI+++  L H ++
Sbjct: 16  LGEGHFGKVSLYCYDPTNDG---TGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 72
Query: 534 VRXX--XXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH 591
           V+                   +P  SL     D    + +G    +   + I +G+ YLH
Sbjct: 73  VKYKGCCEDQGEKSVQLVMEYVPLGSLR----DYLPRHCVGLAQLLLFAQQICEGMAYLH 128
Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGDELQSKTKRIVGTYGYMSPEY 650
                  IHR L A N+LLD D   KI DFG+A+ +  G E     +       + +PE 
Sbjct: 129 AQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 185
Query: 651 AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID--- 707
            ++  F   SDV+SFGV L E L+   +    +T    L+GH        R  EL++   
Sbjct: 186 LKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGE 245
Query: 708 -----PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML 747
                     E  +L+ N        C + +A+ RPT   +V +L
Sbjct: 246 RLPRPDRCPCEIYHLMKN--------CWETEASFRPTFQNLVPIL 282

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 120/273 (43%), Gaps = 29/273 (10%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
           + + ++KLG G +G VY+G        VAVK L   + +  EEF  E  ++ +++H NLV
Sbjct: 18  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 76
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
           +                 M   +L  +L +  ++ +      + +   I+  + YL    
Sbjct: 77  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 132
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG 654
           +   IHRDL A N L+ ++   K++DFG++R+  GD   +          + +PE     
Sbjct: 133 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 191
Query: 655 LFSIKSDVFSFGVLLLET----LSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL 710
            FSIKSDV++FGVLL E     +S     D S    L        L KD R   +  P  
Sbjct: 192 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL--------LEKDYR---MERPEG 240
Query: 711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEV 743
             E  Y ++         C Q + +DRP+  E+
Sbjct: 241 CPEKVYELMRA-------CWQWNPSDRPSFAEI 266

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 120/273 (43%), Gaps = 29/273 (10%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
           + + ++KLG G +G VY+G        VAVK L   + +  EEF  E  ++ +++H NLV
Sbjct: 19  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
           +                 M   +L  +L +  ++ +      + +   I+  + YL    
Sbjct: 78  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 133
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG 654
           +   IHRDL A N L+ ++   K++DFG++R+  GD   +          + +PE     
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAYN 192
Query: 655 LFSIKSDVFSFGVLLLET----LSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL 710
            FSIKSDV++FGVLL E     +S     D S    L        L KD R   +  P  
Sbjct: 193 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL--------LEKDYR---MERPEG 241
Query: 711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEV 743
             E  Y ++         C Q + +DRP+  E+
Sbjct: 242 CPEKVYELMRA-------CWQWNPSDRPSFAEI 267

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 120/273 (43%), Gaps = 29/273 (10%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
           + + ++KLG G +G VY+G        VAVK L   + +  EEF  E  ++ +++H NLV
Sbjct: 19  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
           +                 M   +L  +L +  ++ +      + +   I+  + YL    
Sbjct: 78  QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 133
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG 654
           +   IHRDL A N L+ ++   K++DFG++R+  GD   +          + +PE     
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 192
Query: 655 LFSIKSDVFSFGVLLLET----LSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL 710
            FSIKSDV++FGVLL E     +S     D S    L        L KD R   +  P  
Sbjct: 193 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL--------LEKDYR---MERPEG 241
Query: 711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEV 743
             E  Y ++         C Q + +DRP+  E+
Sbjct: 242 CPEKVYELMRA-------CWQWNPSDRPSFAEI 267

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 98/199 (49%), Gaps = 11/199 (5%)
Query: 481 NKLGEGGFGPVYKGRLLNGQEVAVKR--LSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXX 538
            K+GEG +G VYK +   G+ VA+KR  L ++          EI L+ +L H N+V    
Sbjct: 27  EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 539 XXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRV 598
                         M  K L   L D  K  L     ++ + + + +G+ + HQ+   R+
Sbjct: 87  VIHSERCLTLVFEFM-EKDLKKVL-DENKTGLQDSQIKIYLYQ-LLRGVAHCHQH---RI 140
Query: 599 IHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ-QGLFS 657
           +HRDLK  N+L++ D   K++DFG+AR F G  ++S T  +V T  Y +P+       +S
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAF-GIPVRSYTHEVV-TLWYRAPDVLMGSKKYS 198
Query: 658 IKSDVFSFGVLLLETLSSK 676
              D++S G +  E ++ K
Sbjct: 199 TSVDIWSIGCIFAEMITGK 217

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 121/267 (45%), Gaps = 43/267 (16%)
Query: 500 QEVAVKRLSSQSGQ-GQEEFKNEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKS- 557
           ++VA+KR++ +  Q   +E   EI+ +++  H N+V                  +   S 
Sbjct: 41  EKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSV 100
Query: 558 LDFFLF----DSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKD 613
           LD           K  +L   T   I+  + +GL YLH+  +   IHRD+KA NILL +D
Sbjct: 101 LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGED 157
Query: 614 MNPKISDFGMARIF--GGDELQSKTKR-IVGTYGYMSPEYAQQGL-FSIKSDVFSFGVLL 669
            + +I+DFG++     GGD  ++K ++  VGT  +M+PE  +Q   +  K+D++SFG+  
Sbjct: 158 GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITA 217
Query: 670 LETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYL--------ILNR 721
           +E  +            + +L                  TLQN+   L        +L +
Sbjct: 218 IELATGAAPYHKYPPMKVLML------------------TLQNDPPSLETGVQDKEMLKK 259
Query: 722 Y----INVGLLCVQEDAADRPTMFEVV 744
           Y      +  LC+Q+D   RPT  E++
Sbjct: 260 YGKSFRKMISLCLQKDPEKRPTAAELL 286

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 101/216 (46%), Gaps = 17/216 (7%)
Query: 481 NKLGEGGFGPVY------KGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
            K+GEG FG          GR    +E+ + R+SS+    +EE + E+ ++A ++H N+V
Sbjct: 30  QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKE---REESRREVAVLANMKHPNIV 86
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
           +                      L F   ++ K  L       +I++   Q  L L    
Sbjct: 87  QYRESFEENGSLYIVMDYCEGGDL-FKRINAQKGVLF---QEDQILDWFVQICLALKHVH 142
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD-ELQSKTKRIVGTYGYMSPEYAQQ 653
             +++HRD+K+ NI L KD   ++ DFG+AR+     EL    +  +GT  Y+SPE  + 
Sbjct: 143 DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVEL---ARACIGTPYYLSPEICEN 199
Query: 654 GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTL 689
             ++ KSD+++ G +L E  + K   +  +  +L L
Sbjct: 200 KPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVL 235

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 120/273 (43%), Gaps = 29/273 (10%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
           + + ++KLG G +G VY+G        VAVK L   + +  EEF  E  ++ +++H NLV
Sbjct: 14  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
           +                 M   +L  +L +  ++ +      + +   I+  + YL    
Sbjct: 73  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 128
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG 654
           +   IHRDL A N L+ ++   K++DFG++R+  GD   +          + +PE     
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 187
Query: 655 LFSIKSDVFSFGVLLLET----LSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL 710
            FSIKSDV++FGVLL E     +S     D S    L        L KD R   +  P  
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL--------LEKDYR---MERPEG 236
Query: 711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEV 743
             E  Y ++         C Q + +DRP+  E+
Sbjct: 237 CPEKVYELMRA-------CWQWNPSDRPSFAEI 262

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 98/199 (49%), Gaps = 11/199 (5%)
Query: 481 NKLGEGGFGPVYKGRLLNGQEVAVKR--LSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXX 538
            K+GEG +G VYK +   G+ VA+KR  L ++          EI L+ +L H N+V    
Sbjct: 27  EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 539 XXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRV 598
                         M  K L   L D  K  L     ++ + + + +G+ + HQ+   R+
Sbjct: 87  VIHSERCLTLVFEFM-EKDLKKVL-DENKTGLQDSQIKIYLYQ-LLRGVAHCHQH---RI 140
Query: 599 IHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ-QGLFS 657
           +HRDLK  N+L++ D   K++DFG+AR F G  ++S T  +V T  Y +P+       +S
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAF-GIPVRSYTHEVV-TLWYRAPDVLMGSKKYS 198
Query: 658 IKSDVFSFGVLLLETLSSK 676
              D++S G +  E ++ K
Sbjct: 199 TSVDIWSIGCIFAEMITGK 217

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 114/263 (43%), Gaps = 29/263 (11%)
Query: 481 NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
            +LG G FG V  G+     +VA+K +   S   ++EF  E K++  L H  LV+     
Sbjct: 15  KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTR--VRIIEGIAQGLLYLHQYSRLRV 598
                       M N  L  +L    +E    + T+  + + + + + + YL      + 
Sbjct: 74  TKQRPIFIITEYMANGCLLNYL----REMRHRFQTQQLLEMCKDVCEAMEYLESK---QF 126
Query: 599 IHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSI 658
           +HRDL A N L++     K+SDFG++R    DE  S ++       +  PE      FS 
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SRGSKFPVRWSPPEVLMYSKFSS 185
Query: 659 KSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASY 716
           KSD+++FGVL+ E  +L       F+N+ +   +     L++         P L +E  Y
Sbjct: 186 KSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR---------PHLASEKVY 236
Query: 717 LILNRYINVGLLCVQEDAADRPT 739
            I+         C  E A +RPT
Sbjct: 237 TIMYS-------CWHEKADERPT 252

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 120/273 (43%), Gaps = 29/273 (10%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
           + + ++KLG G +G VY+G        VAVK L   + +  EEF  E  ++ +++H NLV
Sbjct: 14  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
           +                 M   +L  +L +  ++ +      + +   I+  + YL    
Sbjct: 73  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYL---E 128
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG 654
           +   IHRDL A N L+ ++   K++DFG++R+  GD   +          + +PE     
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 187
Query: 655 LFSIKSDVFSFGVLLLET----LSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL 710
            FSIKSDV++FGVLL E     +S     D S    L        L KD R   +  P  
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL--------LEKDYR---MERPEG 236
Query: 711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEV 743
             E  Y ++         C Q + +DRP+  E+
Sbjct: 237 CPEKVYELMRA-------CWQWNPSDRPSFAEI 262

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 99/217 (45%), Gaps = 23/217 (10%)
Query: 470 VSAATANFSTENK----LGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQ---GQEEFKNE 521
           V  +TA FS   K    LG+G FG V   +  + GQE AVK +S +  +    +E    E
Sbjct: 17  VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 76
Query: 522 IKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDST-KENLLGWGTRVRII 580
           ++L+ +L H N+ +                      L    FD              RII
Sbjct: 77  VQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARII 132
Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLD---KDMNPKISDFGMARIFGGDELQSKTK 637
             +  G+ Y H   + +++HRDLK  N+LL+   KD N +I DFG++  F   E   K K
Sbjct: 133 RQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKXK 186
Query: 638 RIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +GT  Y++PE    G +  K DV+S GV+L   LS
Sbjct: 187 DKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLS 222

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 120/273 (43%), Gaps = 29/273 (10%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
           + + ++KLG G +G VY+G        VAVK L   + +  EEF  E  ++ +++H NLV
Sbjct: 19  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
           +                 M   +L  +L +  ++ +      + +   I+  + YL    
Sbjct: 78  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYLE--- 133
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG 654
           +   IHRDL A N L+ ++   K++DFG++R+  GD   +          + +PE     
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 192
Query: 655 LFSIKSDVFSFGVLLLET----LSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL 710
            FSIKSDV++FGVLL E     +S     D S    L        L KD R   +  P  
Sbjct: 193 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL--------LEKDYR---MERPEG 241
Query: 711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEV 743
             E  Y ++         C Q + +DRP+  E+
Sbjct: 242 CPEKVYELMRA-------CWQWNPSDRPSFAEI 267

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 115/266 (43%), Gaps = 35/266 (13%)
Query: 481 NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
            +LG G FG V  G+     +VA+K +   S   ++EF  E K++  L H  LV+     
Sbjct: 30  KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTR--VRIIEGIAQGLLYLHQYSRLRV 598
                       M N  L  +L    +E    + T+  + + + + + + YL      + 
Sbjct: 89  TKQRPIFIITEYMANGCLLNYL----REMRHRFQTQQLLEMCKDVCEAMEYLESK---QF 141
Query: 599 IHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT---YGYMSPEYAQQGL 655
           +HRDL A N L++     K+SDFG++R    DE  S     VG+     +  PE      
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSS----VGSKFPVRWSPPEVLMYSK 197
Query: 656 FSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNE 713
           FS KSD+++FGVL+ E  +L       F+N+ +   +     L++         P L +E
Sbjct: 198 FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR---------PHLASE 248
Query: 714 ASYLILNRYINVGLLCVQEDAADRPT 739
             Y I+         C  E A +RPT
Sbjct: 249 KVYTIMYS-------CWHEKADERPT 267

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 121/273 (44%), Gaps = 29/273 (10%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
           + + ++KLG G +G VY+G        VAVK L   + +  EEF  E  ++ +++H NLV
Sbjct: 14  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
           +                 M   +L  +L +  ++ +      + +   I+  + YL + +
Sbjct: 73  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYLEKKN 131
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG 654
               IHRDL A N L+ ++   K++DFG++R+  GD   +          + +PE     
Sbjct: 132 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 187
Query: 655 LFSIKSDVFSFGVLLLET----LSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL 710
            FSIKSDV++FGVLL E     +S     D S    L        L KD R   +  P  
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL--------LEKDYR---MERPEG 236
Query: 711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEV 743
             E  Y ++         C Q + +DRP+  E+
Sbjct: 237 CPEKVYELMRA-------CWQWNPSDRPSFAEI 262

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 101/205 (49%), Gaps = 11/205 (5%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRN 532
           NF    K+GEG +G VYK R  L G+ VA+K  RL +++         EI L+ +L H N
Sbjct: 7   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
           +V+                 + ++ L  F+ D++    +        +  + QGL + H 
Sbjct: 67  IVKLLDVIHTENKLYLVFEFL-HQDLKTFM-DASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ 652
           +   RV+HRDLK  N+L++ +   K++DFG+AR FG   +++    +V T  Y +PE   
Sbjct: 125 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILL 179
Query: 653 Q-GLFSIKSDVFSFGVLLLETLSSK 676
               +S   D++S G +  E ++ +
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRR 204

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 120/273 (43%), Gaps = 29/273 (10%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
           + + ++KLG G +G VY+G        VAVK L   + +  EEF  E  ++ +++H NLV
Sbjct: 14  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
           +                 M   +L  +L +  ++ +      + +   I+  + YL    
Sbjct: 73  QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYL---E 128
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG 654
           +   IHRDL A N L+ ++   K++DFG++R+  GD   +          + +PE     
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 187
Query: 655 LFSIKSDVFSFGVLLLET----LSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL 710
            FSIKSDV++FGVLL E     +S     D S    L        L KD R   +  P  
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL--------LEKDYR---MERPEG 236
Query: 711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEV 743
             E  Y ++         C Q + +DRP+  E+
Sbjct: 237 CPEKVYELMRA-------CWQWNPSDRPSFAEI 262

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 101/205 (49%), Gaps = 11/205 (5%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRN 532
           NF    K+GEG +G VYK R  L G+ VA+K  RL +++         EI L+ +L H N
Sbjct: 4   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
           +V+                 + ++ L  F+ D++    +        +  + QGL + H 
Sbjct: 64  IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ 652
           +   RV+HRDLK  N+L++ +   K++DFG+AR FG   +++    +V T  Y +PE   
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILL 176
Query: 653 Q-GLFSIKSDVFSFGVLLLETLSSK 676
               +S   D++S G +  E ++ +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 101/205 (49%), Gaps = 11/205 (5%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRN 532
           NF    K+GEG +G VYK R  L G+ VA+K  RL +++         EI L+ +L H N
Sbjct: 3   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
           +V+                 + ++ L  F+ D++    +        +  + QGL + H 
Sbjct: 63  IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ 652
           +   RV+HRDLK  N+L++ +   K++DFG+AR FG   +++    +V T  Y +PE   
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILL 175
Query: 653 Q-GLFSIKSDVFSFGVLLLETLSSK 676
               +S   D++S G +  E ++ +
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRR 200

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 101/205 (49%), Gaps = 11/205 (5%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRN 532
           NF    K+GEG +G VYK R  L G+ VA+   RL +++         EI L+ +L H N
Sbjct: 4   NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
           +V+                 + ++ L  F+ D++    +        +  + QGL + H 
Sbjct: 64  IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ 652
           +   RV+HRDLK  N+L++ +   K++DFG+AR FG   +++ T  +V T  Y +PE   
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILL 176
Query: 653 Q-GLFSIKSDVFSFGVLLLETLSSK 676
               +S   D++S G +  E ++ +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 101/205 (49%), Gaps = 11/205 (5%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRN 532
           NF    K+GEG +G VYK R  L G+ VA+   RL +++         EI L+ +L H N
Sbjct: 3   NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
           +V+                 + ++ L  F+ D++    +        +  + QGL + H 
Sbjct: 63  IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ 652
           +   RV+HRDLK  N+L++ +   K++DFG+AR FG   +++ T  +V T  Y +PE   
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILL 175
Query: 653 Q-GLFSIKSDVFSFGVLLLETLSSK 676
               +S   D++S G +  E ++ +
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRR 200

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 120/273 (43%), Gaps = 29/273 (10%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
           + + ++KLG G +G VY+G        VAVK L   + +  EEF  E  ++ +++H NLV
Sbjct: 14  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
           +                 M   +L  +L +  ++ +      + +   I+  + YL    
Sbjct: 73  QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYL---E 128
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG 654
           +   IHRDL A N L+ ++   K++DFG++R+  GD   +          + +PE     
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 187
Query: 655 LFSIKSDVFSFGVLLLET----LSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL 710
            FSIKSDV++FGVLL E     +S     D S    L        L KD R   +  P  
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL--------LEKDYR---MERPEG 236
Query: 711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEV 743
             E  Y ++         C Q + +DRP+  E+
Sbjct: 237 CPEKVYELMRA-------CWQWNPSDRPSFAEI 262

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 13/206 (6%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRN 532
           NF    K+GEG +G VYK R  L G+ VA+K  RL +++         EI L+ +L H N
Sbjct: 7   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLF-DSTKENLLGWGTRVRIIEGIAQGLLYLH 591
           +V+                 +   S+D   F D++    +        +  + QGL + H
Sbjct: 67  IVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYA 651
            +   RV+HRDLK  N+L++ +   K++DFG+AR FG   +++    +V T  Y +PE  
Sbjct: 124 SH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEIL 178
Query: 652 QQ-GLFSIKSDVFSFGVLLLETLSSK 676
                +S   D++S G +  E ++ +
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRR 204

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 101/205 (49%), Gaps = 11/205 (5%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRN 532
           NF    K+GEG +G VYK R  L G+ VA+K  RL +++         EI L+ +L H N
Sbjct: 3   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
           +V+                 + ++ L  F+ D++    +        +  + QGL + H 
Sbjct: 63  IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ 652
           +   RV+HRDLK  N+L++ +   K++DFG+AR FG   +++    +V T  Y +PE   
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILL 175
Query: 653 Q-GLFSIKSDVFSFGVLLLETLSSK 676
               +S   D++S G +  E ++ +
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRR 200

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 33/216 (15%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRN 532
           NF    K+GEG +G VYK R  L G+ VA+K  RL +++         EI L+ +L H N
Sbjct: 7   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGW-------GTRVRIIEG--- 582
           +V+                   NK   + +F+   ++L  +       G  + +I+    
Sbjct: 67  IVKLLDVIHTE-----------NKL--YLVFEHVDQDLKKFMDASALTGIPLPLIKSYLF 113
Query: 583 -IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            + QGL + H +   RV+HRDLK  N+L++ +   K++DFG+AR FG   +++    +V 
Sbjct: 114 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV- 168
Query: 642 TYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSK 676
           T  Y +PE       +S   D++S G +  E ++ +
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 120/273 (43%), Gaps = 29/273 (10%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
           + + ++KLG G +G VY+G        VAVK L   + +  EEF  E  ++ +++H NLV
Sbjct: 16  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 74
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
           +                 M   +L  +L +  ++ +      + +   I+  + YL    
Sbjct: 75  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 130
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG 654
           +   IHRDL A N L+ ++   K++DFG++R+  GD   +          + +PE     
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI-KWTAPESLAYN 189
Query: 655 LFSIKSDVFSFGVLLLET----LSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL 710
            FSIKSDV++FGVLL E     +S     D S    L        L KD R   +  P  
Sbjct: 190 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL--------LEKDYR---MERPEG 238
Query: 711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEV 743
             E  Y ++         C Q + +DRP+  E+
Sbjct: 239 CPEKVYELMRA-------CWQWNPSDRPSFAEI 264

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 101/205 (49%), Gaps = 11/205 (5%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRN 532
           NF    K+GEG +G VYK R  L G+ VA+K  RL +++         EI L+ +L H N
Sbjct: 7   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
           +V+                 + ++ L  F+ D++    +        +  + QGL + H 
Sbjct: 67  IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ 652
           +   RV+HRDLK  N+L++ +   K++DFG+AR FG   +++    +V T  Y +PE   
Sbjct: 125 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILL 179
Query: 653 Q-GLFSIKSDVFSFGVLLLETLSSK 676
               +S   D++S G +  E ++ +
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRR 204

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 101/205 (49%), Gaps = 11/205 (5%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRN 532
           NF    K+GEG +G VYK R  L G+ VA+K  RL +++         EI L+ +L H N
Sbjct: 6   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
           +V+                 + ++ L  F+ D++    +        +  + QGL + H 
Sbjct: 66  IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ 652
           +   RV+HRDLK  N+L++ +   K++DFG+AR FG   +++    +V T  Y +PE   
Sbjct: 124 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILL 178
Query: 653 Q-GLFSIKSDVFSFGVLLLETLSSK 676
               +S   D++S G +  E ++ +
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRR 203

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 101/205 (49%), Gaps = 11/205 (5%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRN 532
           NF    K+GEG +G VYK R  L G+ VA+K  RL +++         EI L+ +L H N
Sbjct: 6   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
           +V+                 + ++ L  F+ D++    +        +  + QGL + H 
Sbjct: 66  IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ 652
           +   RV+HRDLK  N+L++ +   K++DFG+AR FG   +++    +V T  Y +PE   
Sbjct: 124 H---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILL 178
Query: 653 Q-GLFSIKSDVFSFGVLLLETLSSK 676
               +S   D++S G +  E ++ +
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRR 203

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 101/205 (49%), Gaps = 11/205 (5%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRN 532
           NF    K+GEG +G VYK R  L G+ VA+K  RL +++         EI L+ +L H N
Sbjct: 4   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
           +V+                 + ++ L  F+ D++    +        +  + QGL + H 
Sbjct: 64  IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ 652
           +   RV+HRDLK  N+L++ +   K++DFG+AR FG   +++    +V T  Y +PE   
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILL 176
Query: 653 Q-GLFSIKSDVFSFGVLLLETLSSK 676
               +S   D++S G +  E ++ +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 120/273 (43%), Gaps = 29/273 (10%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
           + + ++KLG G +G VY+G        VAVK L   + +  EEF  E  ++ +++H NLV
Sbjct: 19  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
           +                 M   +L  +L +  ++ +      + +   I+  + YL    
Sbjct: 78  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYLE--- 133
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG 654
           +   IHRDL A N L+ ++   K++DFG++R+  GD   +          + +PE     
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 192
Query: 655 LFSIKSDVFSFGVLLLET----LSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL 710
            FSIKSDV++FGVLL E     +S     D S    L        L KD R   +  P  
Sbjct: 193 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL--------LEKDYR---MERPEG 241
Query: 711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEV 743
             E  Y ++         C Q + +DRP+  E+
Sbjct: 242 CPEKVYELMRA-------CWQWNPSDRPSFAEI 267

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 120/273 (43%), Gaps = 29/273 (10%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
           + + ++KLG G +G VY+G        VAVK L   + +  EEF  E  ++ +++H NLV
Sbjct: 16  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 74
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
           +                 M   +L  +L +  ++ +      + +   I+  + YL    
Sbjct: 75  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 130
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG 654
           +   IHRDL A N L+ ++   K++DFG++R+  GD   +          + +PE     
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 189
Query: 655 LFSIKSDVFSFGVLLLET----LSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL 710
            FSIKSDV++FGVLL E     +S     D S    L        L KD R   +  P  
Sbjct: 190 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL--------LEKDYR---MERPEG 238
Query: 711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEV 743
             E  Y ++         C Q + +DRP+  E+
Sbjct: 239 CPEKVYELMRA-------CWQWNPSDRPSFAEI 264

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 101/205 (49%), Gaps = 11/205 (5%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRN 532
           NF    K+GEG +G VYK R  L G+ VA+K  RL +++         EI L+ +L H N
Sbjct: 6   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
           +V+                 + ++ L  F+ D++    +        +  + QGL + H 
Sbjct: 66  IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ 652
           +   RV+HRDLK  N+L++ +   K++DFG+AR FG   +++    +V T  Y +PE   
Sbjct: 124 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILL 178
Query: 653 Q-GLFSIKSDVFSFGVLLLETLSSK 676
               +S   D++S G +  E ++ +
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRR 203

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 13/206 (6%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRN 532
           NF    K+GEG +G VYK R  L G+ VA+K  RL +++         EI L+ +L H N
Sbjct: 5   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLF-DSTKENLLGWGTRVRIIEGIAQGLLYLH 591
           +V+                 +   S+D   F D++    +        +  + QGL + H
Sbjct: 65  IVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYA 651
            +   RV+HRDLK  N+L++ +   K++DFG+AR FG   +++    +V T  Y +PE  
Sbjct: 122 SH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEIL 176
Query: 652 QQ-GLFSIKSDVFSFGVLLLETLSSK 676
                +S   D++S G +  E ++ +
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRR 202

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 101/205 (49%), Gaps = 11/205 (5%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRN 532
           NF    K+GEG +G VYK R  L G+ VA+K  RL +++         EI L+ +L H N
Sbjct: 4   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
           +V+                 + ++ L  F+ D++    +        +  + QGL + H 
Sbjct: 64  IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ 652
           +   RV+HRDLK  N+L++ +   K++DFG+AR FG   +++    +V T  Y +PE   
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILL 176
Query: 653 Q-GLFSIKSDVFSFGVLLLETLSSK 676
               +S   D++S G +  E ++ +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 101/205 (49%), Gaps = 11/205 (5%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRN 532
           NF    K+GEG +G VYK R  L G+ VA+K  RL +++         EI L+ +L H N
Sbjct: 5   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
           +V+                 + ++ L  F+ D++    +        +  + QGL + H 
Sbjct: 65  IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ 652
           +   RV+HRDLK  N+L++ +   K++DFG+AR FG   +++    +V T  Y +PE   
Sbjct: 123 H---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILL 177
Query: 653 Q-GLFSIKSDVFSFGVLLLETLSSK 676
               +S   D++S G +  E ++ +
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRR 202

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 101/205 (49%), Gaps = 11/205 (5%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRN 532
           NF    K+GEG +G VYK R  L G+ VA+K  RL +++         EI L+ +L H N
Sbjct: 5   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
           +V+                 + ++ L  F+ D++    +        +  + QGL + H 
Sbjct: 65  IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ 652
           +   RV+HRDLK  N+L++ +   K++DFG+AR FG   +++    +V T  Y +PE   
Sbjct: 123 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILL 177
Query: 653 Q-GLFSIKSDVFSFGVLLLETLSSK 676
               +S   D++S G +  E ++ +
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRR 202

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 101/205 (49%), Gaps = 11/205 (5%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRN 532
           NF    K+GEG +G VYK R  L G+ VA+K  RL +++         EI L+ +L H N
Sbjct: 5   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
           +V+                 + ++ L  F+ D++    +        +  + QGL + H 
Sbjct: 65  IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ 652
           +   RV+HRDLK  N+L++ +   K++DFG+AR FG   +++    +V T  Y +PE   
Sbjct: 123 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILL 177
Query: 653 Q-GLFSIKSDVFSFGVLLLETLSSK 676
               +S   D++S G +  E ++ +
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRR 202

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 120/273 (43%), Gaps = 29/273 (10%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
           + + ++KLG G +G VY+G        VAVK L   + +  EEF  E  ++ +++H NLV
Sbjct: 15  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 73
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
           +                 M   +L  +L +  ++ +      + +   I+  + YL    
Sbjct: 74  QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 129
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG 654
           +   IHRDL A N L+ ++   K++DFG++R+  GD   +          + +PE     
Sbjct: 130 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAYN 188
Query: 655 LFSIKSDVFSFGVLLLET----LSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL 710
            FSIKSDV++FGVLL E     +S     D S    L        L KD R   +  P  
Sbjct: 189 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL--------LEKDYR---MERPEG 237
Query: 711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEV 743
             E  Y ++         C Q + +DRP+  E+
Sbjct: 238 CPEKVYELMRA-------CWQWNPSDRPSFAEI 263

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 120/273 (43%), Gaps = 29/273 (10%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
           + + ++KLG G +G VY+G        VAVK L   + +  EEF  E  ++ +++H NLV
Sbjct: 27  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 85
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
           +                 M   +L  +L +  ++ +      + +   I+  + YL    
Sbjct: 86  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 141
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG 654
           +   IHRDL A N L+ ++   K++DFG++R+  GD   +          + +PE     
Sbjct: 142 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 200
Query: 655 LFSIKSDVFSFGVLLLET----LSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL 710
            FSIKSDV++FGVLL E     +S     D S    L        L KD R   +  P  
Sbjct: 201 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL--------LEKDYR---MERPEG 249
Query: 711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEV 743
             E  Y ++         C Q + +DRP+  E+
Sbjct: 250 CPEKVYELMRA-------CWQWNPSDRPSFAEI 275

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 101/205 (49%), Gaps = 11/205 (5%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRN 532
           NF    K+GEG +G VYK R  L G+ VA+K  RL +++         EI L+ +L H N
Sbjct: 4   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
           +V+                 + ++ L  F+ D++    +        +  + QGL + H 
Sbjct: 64  IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ 652
           +   RV+HRDLK  N+L++ +   K++DFG+AR FG   +++    +V T  Y +PE   
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILL 176
Query: 653 Q-GLFSIKSDVFSFGVLLLETLSSK 676
               +S   D++S G +  E ++ +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 120/273 (43%), Gaps = 29/273 (10%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
           + + ++KLG G +G VY+G        VAVK L   + +  EEF  E  ++ +++H NLV
Sbjct: 16  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 74
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
           +                 M   +L  +L +  ++ +      + +   I+  + YL    
Sbjct: 75  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 130
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG 654
           +   IHRDL A N L+ ++   K++DFG++R+  GD   +          + +PE     
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 189
Query: 655 LFSIKSDVFSFGVLLLET----LSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL 710
            FSIKSDV++FGVLL E     +S     D S    L        L KD R   +  P  
Sbjct: 190 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL--------LEKDYR---MERPEG 238
Query: 711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEV 743
             E  Y ++         C Q + +DRP+  E+
Sbjct: 239 CPEKVYELMRA-------CWQWNPSDRPSFAEI 264

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 7/208 (3%)
Query: 465 FSLASVSAATANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIK 523
            SL        + + ++KLG G FG VY+G        VAVK L   + +  EEF  E  
Sbjct: 1   MSLDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAA 59
Query: 524 LIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGI 583
           ++ +++H NLV+                 M   +L  +L +  ++ +      + +   I
Sbjct: 60  VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQI 118
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           +  + YL + +    IHRDL A N L+ ++   K++DFG++R+  GD   +         
Sbjct: 119 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI- 174
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            + +PE      FSIKSDV++FGVLL E
Sbjct: 175 KWTAPESLAYNKFSIKSDVWAFGVLLWE 202

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 101/205 (49%), Gaps = 11/205 (5%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRN 532
           NF    K+GEG +G VYK R  L G+ VA+K  RL +++         EI L+ +L H N
Sbjct: 7   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
           +V+                 + ++ L  F+ D++    +        +  + QGL + H 
Sbjct: 67  IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ 652
           +   RV+HRDLK  N+L++ +   K++DFG+AR FG   +++    +V T  Y +PE   
Sbjct: 125 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILL 179
Query: 653 Q-GLFSIKSDVFSFGVLLLETLSSK 676
               +S   D++S G +  E ++ +
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRR 204

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 120/273 (43%), Gaps = 29/273 (10%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
           + + ++KLG G +G VY+G        VAVK L   + +  EEF  E  ++ +++H NLV
Sbjct: 15  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 73
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
           +                 M   +L  +L +  ++ +      + +   I+  + YL    
Sbjct: 74  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYLE--- 129
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG 654
           +   IHRDL A N L+ ++   K++DFG++R+  GD   +          + +PE     
Sbjct: 130 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI-KWTAPESLAYN 188
Query: 655 LFSIKSDVFSFGVLLLET----LSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL 710
            FSIKSDV++FGVLL E     +S     D S    L        L KD R   +  P  
Sbjct: 189 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL--------LEKDYR---MERPEG 237
Query: 711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEV 743
             E  Y ++         C Q + +DRP+  E+
Sbjct: 238 CPEKVYELMRA-------CWQWNPSDRPSFAEI 263

>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain From Human Length = 314

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 15/208 (7%)
Query: 486 GGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXXXXXXX 545
           G FG V+K +L+N   VAVK    Q  Q  +  + EI     ++H NL++          
Sbjct: 26  GRFGCVWKAQLMN-DFVAVKIFPLQDKQSWQS-EREIFSTPGMKHENLLQFIAAEKRGSN 83
Query: 546 XXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ--------YSRLR 597
                  +        L D  K N++ W     + E +++GL YLH+          +  
Sbjct: 84  LEVELWLITAFHDKGSLTDYLKGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPS 143
Query: 598 VIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGL-- 655
           + HRD K+ N+LL  D+   ++DFG+A  F   +    T   VGT  YM+PE  +  +  
Sbjct: 144 IAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINF 203
Query: 656 ---FSIKSDVFSFGVLLLETLSSKRNTD 680
                ++ D+++ G++L E +S  +  D
Sbjct: 204 QRDAFLRIDMYAMGLVLWELVSRCKAAD 231

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 101/205 (49%), Gaps = 11/205 (5%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRN 532
           NF    K+GEG +G VYK R  L G+ VA+K  RL +++         EI L+ +L H N
Sbjct: 8   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 67
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
           +V+                 + ++ L  F+ D++    +        +  + QGL + H 
Sbjct: 68  IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ 652
           +   RV+HRDLK  N+L++ +   K++DFG+AR FG   +++    +V T  Y +PE   
Sbjct: 126 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILL 180
Query: 653 Q-GLFSIKSDVFSFGVLLLETLSSK 676
               +S   D++S G +  E ++ +
Sbjct: 181 GCKYYSTAVDIWSLGCIFAEMVTRR 205

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 126/278 (45%), Gaps = 35/278 (12%)
Query: 483 LGEGGFGPVYKGRLLN--GQEV--AVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNLVRXX 537
           +G G FG VY G LL+  G+++  AVK L+  +  G+  +F  E  ++    H N++   
Sbjct: 37  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 538 XX-XXXXXXXXXXXXXMPNKSLDFFL----FDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
                           M +  L  F+     + T ++L+G+G +V      A+G+ YL  
Sbjct: 97  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 148
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT--YGYMSPEY 650
            +  + +HRDL A N +LD+    K++DFG+AR     E  S   +        +M+ E 
Sbjct: 149 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 207
Query: 651 AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL 710
            Q   F+ KSDV+SFGVLL E L ++    + + N+  +  +        +   L+ P  
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTFDITVYLL------QGRRLLQPEY 260
Query: 711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT 748
             +  Y        V L C    A  RP+  E+VS ++
Sbjct: 261 CPDPLY-------EVMLKCWHPKAEMRPSFSELVSRIS 291

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 126/278 (45%), Gaps = 35/278 (12%)
Query: 483 LGEGGFGPVYKGRLLN--GQEV--AVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNLVRXX 537
           +G G FG VY G LL+  G+++  AVK L+  +  G+  +F  E  ++    H N++   
Sbjct: 33  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 538 XX-XXXXXXXXXXXXXMPNKSLDFFL----FDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
                           M +  L  F+     + T ++L+G+G +V      A+G+ YL  
Sbjct: 93  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 144
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT--YGYMSPEY 650
            +  + +HRDL A N +LD+    K++DFG+AR     E  S   +        +M+ E 
Sbjct: 145 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 203
Query: 651 AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL 710
            Q   F+ KSDV+SFGVLL E L ++    + + N+  +  +        +   L+ P  
Sbjct: 204 LQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTFDITVYLL------QGRRLLQPEY 256
Query: 711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT 748
             +  Y        V L C    A  RP+  E+VS ++
Sbjct: 257 CPDPLY-------EVMLKCWHPKAEMRPSFSELVSRIS 287

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 126/278 (45%), Gaps = 35/278 (12%)
Query: 483 LGEGGFGPVYKGRLLN--GQEV--AVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNLVRXX 537
           +G G FG VY G LL+  G+++  AVK L+  +  G+  +F  E  ++    H N++   
Sbjct: 37  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 538 XX-XXXXXXXXXXXXXMPNKSLDFFL----FDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
                           M +  L  F+     + T ++L+G+G +V      A+G+ YL  
Sbjct: 97  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 148
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT--YGYMSPEY 650
            +  + +HRDL A N +LD+    K++DFG+AR     E  S   +        +M+ E 
Sbjct: 149 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALES 207
Query: 651 AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL 710
            Q   F+ KSDV+SFGVLL E L ++    + + N+  +  +        +   L+ P  
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTFDITVYLL------QGRRLLQPEY 260
Query: 711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT 748
             +  Y        V L C    A  RP+  E+VS ++
Sbjct: 261 CPDPLY-------EVMLKCWHPKAEMRPSFSELVSRIS 291

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 10/201 (4%)
Query: 477 FSTENKLGEGGFGPVYKG-RLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR 535
           F    KLGEG +G VYK      GQ VA+K++  +S    +E   EI ++ +    ++V+
Sbjct: 31  FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDL--QEIIKEISIMQQCDSPHVVK 88
Query: 536 XXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSR 595
                                S+   +    +   L       I++   +GL YLH    
Sbjct: 89  YYGSYFKNTDLWIVMEYCGAGSVSDII--RLRNKTLTEDEIATILQSTLKGLEYLH---F 143
Query: 596 LRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGL 655
           +R IHRD+KA NILL+ + + K++DFG+A      +  +K   ++GT  +M+PE  Q+  
Sbjct: 144 MRKIHRDIKAGNILLNTEGHAKLADFGVAGQL--TDXMAKRNXVIGTPFWMAPEVIQEIG 201
Query: 656 FSIKSDVFSFGVLLLETLSSK 676
           ++  +D++S G+  +E    K
Sbjct: 202 YNCVADIWSLGITAIEMAEGK 222

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 126/278 (45%), Gaps = 35/278 (12%)
Query: 483 LGEGGFGPVYKGRLLN--GQEV--AVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNLVRXX 537
           +G G FG VY G LL+  G+++  AVK L+  +  G+  +F  E  ++    H N++   
Sbjct: 38  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 538 XX-XXXXXXXXXXXXXMPNKSLDFFL----FDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
                           M +  L  F+     + T ++L+G+G +V      A+G+ YL  
Sbjct: 98  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 149
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT--YGYMSPEY 650
            +  + +HRDL A N +LD+    K++DFG+AR     E  S   +        +M+ E 
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 651 AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL 710
            Q   F+ KSDV+SFGVLL E L ++    + + N+  +  +        +   L+ P  
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTFDITVYLL------QGRRLLQPEY 261
Query: 711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT 748
             +  Y        V L C    A  RP+  E+VS ++
Sbjct: 262 CPDPLY-------EVMLKCWHPKAEMRPSFSELVSRIS 292

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 126/278 (45%), Gaps = 35/278 (12%)
Query: 483 LGEGGFGPVYKGRLLN--GQEV--AVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNLVRXX 537
           +G G FG VY G LL+  G+++  AVK L+  +  G+  +F  E  ++    H N++   
Sbjct: 30  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 538 XX-XXXXXXXXXXXXXMPNKSLDFFL----FDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
                           M +  L  F+     + T ++L+G+G +V      A+G+ YL  
Sbjct: 90  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 141
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT--YGYMSPEY 650
            +  + +HRDL A N +LD+    K++DFG+AR     E  S   +        +M+ E 
Sbjct: 142 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 200
Query: 651 AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL 710
            Q   F+ KSDV+SFGVLL E L ++    + + N+  +  +        +   L+ P  
Sbjct: 201 LQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTFDITVYLL------QGRRLLQPEY 253
Query: 711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT 748
             +  Y        V L C    A  RP+  E+VS ++
Sbjct: 254 CPDPLY-------EVMLKCWHPKAEMRPSFSELVSRIS 284

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 126/278 (45%), Gaps = 35/278 (12%)
Query: 483 LGEGGFGPVYKGRLLN--GQEV--AVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNLVRXX 537
           +G G FG VY G LL+  G+++  AVK L+  +  G+  +F  E  ++    H N++   
Sbjct: 57  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 538 XX-XXXXXXXXXXXXXMPNKSLDFFL----FDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
                           M +  L  F+     + T ++L+G+G +V      A+G+ YL  
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 168
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT--YGYMSPEY 650
            +  + +HRDL A N +LD+    K++DFG+AR     E  S   +        +M+ E 
Sbjct: 169 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 227
Query: 651 AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL 710
            Q   F+ KSDV+SFGVLL E L ++    + + N+  +  +        +   L+ P  
Sbjct: 228 LQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTFDITVYLL------QGRRLLQPEY 280
Query: 711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT 748
             +  Y        V L C    A  RP+  E+VS ++
Sbjct: 281 CPDPLY-------EVMLKCWHPKAEMRPSFSELVSRIS 311

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 126/278 (45%), Gaps = 35/278 (12%)
Query: 483 LGEGGFGPVYKGRLLN--GQEV--AVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNLVRXX 537
           +G G FG VY G LL+  G+++  AVK L+  +  G+  +F  E  ++    H N++   
Sbjct: 38  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 538 XX-XXXXXXXXXXXXXMPNKSLDFFL----FDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
                           M +  L  F+     + T ++L+G+G +V      A+G+ YL  
Sbjct: 98  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 149
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT--YGYMSPEY 650
            +  + +HRDL A N +LD+    K++DFG+AR     E  S   +        +M+ E 
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 651 AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL 710
            Q   F+ KSDV+SFGVLL E L ++    + + N+  +  +        +   L+ P  
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTFDITVYLL------QGRRLLQPEY 261
Query: 711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT 748
             +  Y        V L C    A  RP+  E+VS ++
Sbjct: 262 CPDPLY-------EVMLKCWHPKAEMRPSFSELVSRIS 292

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 126/278 (45%), Gaps = 35/278 (12%)
Query: 483 LGEGGFGPVYKGRLLN--GQEV--AVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNLVRXX 537
           +G G FG VY G LL+  G+++  AVK L+  +  G+  +F  E  ++    H N++   
Sbjct: 56  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 538 XX-XXXXXXXXXXXXXMPNKSLDFFL----FDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
                           M +  L  F+     + T ++L+G+G +V      A+G+ YL  
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 167
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT--YGYMSPEY 650
            +  + +HRDL A N +LD+    K++DFG+AR     E  S   +        +M+ E 
Sbjct: 168 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 226
Query: 651 AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL 710
            Q   F+ KSDV+SFGVLL E L ++    + + N+  +  +        +   L+ P  
Sbjct: 227 LQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTFDITVYLL------QGRRLLQPEY 279
Query: 711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT 748
             +  Y        V L C    A  RP+  E+VS ++
Sbjct: 280 CPDPLY-------EVMLKCWHPKAEMRPSFSELVSRIS 310

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 126/278 (45%), Gaps = 35/278 (12%)
Query: 483 LGEGGFGPVYKGRLLN--GQEV--AVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNLVRXX 537
           +G G FG VY G LL+  G+++  AVK L+  +  G+  +F  E  ++    H N++   
Sbjct: 35  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 538 XX-XXXXXXXXXXXXXMPNKSLDFFL----FDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
                           M +  L  F+     + T ++L+G+G +V      A+G+ YL  
Sbjct: 95  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 146
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT--YGYMSPEY 650
            +  + +HRDL A N +LD+    K++DFG+AR     E  S   +        +M+ E 
Sbjct: 147 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 205
Query: 651 AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL 710
            Q   F+ KSDV+SFGVLL E L ++    + + N+  +  +        +   L+ P  
Sbjct: 206 LQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTFDITVYLL------QGRRLLQPEY 258
Query: 711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT 748
             +  Y        V L C    A  RP+  E+VS ++
Sbjct: 259 CPDPLY-------EVMLKCWHPKAEMRPSFSELVSRIS 289

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 98/208 (47%), Gaps = 7/208 (3%)
Query: 465 FSLASVSAATANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIK 523
            SL        + + ++KLG G +G VY+G        VAVK L   + +  EEF  E  
Sbjct: 1   MSLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAA 59
Query: 524 LIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGI 583
           ++ +++H NLV+                 M   +L  +L +  ++ +      + +   I
Sbjct: 60  VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQI 118
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           +  + YL + +    IHRDL A N L+ ++   K++DFG++R+  GD   +         
Sbjct: 119 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPI- 174
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            + +PE      FSIKSDV++FGVLL E
Sbjct: 175 KWTAPESLAYNKFSIKSDVWAFGVLLWE 202

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 21/214 (9%)
Query: 477 FSTENKLGEGGFGPVYKG-RLLNGQEVAVKRLSSQ-SGQGQEEFKNEIKLIAKLQHRNLV 534
           +  + +LG GGFG V +      G++VA+K+   + S + +E +  EI+++ KL H N+V
Sbjct: 16  WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENL--------LGWGTRVRIIEGIAQG 586
                             +P  ++++      ++ L        L  G    ++  I+  
Sbjct: 76  --SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA 133
Query: 587 LLYLHQYSRLRVIHRDLKASNILLD---KDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           L YLH+    R+IHRDLK  NI+L    + +  KI D G A+     EL ++    VGT 
Sbjct: 134 LRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTE---FVGTL 187
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKR 677
            Y++PE  +Q  +++  D +SFG L  E ++  R
Sbjct: 188 QYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 221

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 98/199 (49%), Gaps = 10/199 (5%)
Query: 483 LGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQEEFKN---EIKLIAKLQHRNLVRXXX 538
           LG GGFG V+  ++   G+  A K+L+ +  + ++ ++    E K++AK+  R +V    
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 539 XXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTR-VRIIEGIAQGLLYLHQYSRLR 597
                         M    + + +++  ++N      R +     I  GL +LHQ +   
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN--- 309
Query: 598 VIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFS 657
           +I+RDLK  N+LLD D N +ISD G+A        Q+KTK   GT G+M+PE      + 
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG--QTKTKGYAGTPGFMAPELLLGEEYD 367
Query: 658 IKSDVFSFGVLLLETLSSK 676
              D F+ GV L E ++++
Sbjct: 368 FSVDYFALGVTLYEMIAAR 386

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 70.5 bits (171), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 126/278 (45%), Gaps = 35/278 (12%)
Query: 483 LGEGGFGPVYKGRLLN--GQEV--AVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNLVRXX 537
           +G G FG VY G LL+  G+++  AVK L+  +  G+  +F  E  ++    H N++   
Sbjct: 36  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 538 XX-XXXXXXXXXXXXXMPNKSLDFFL----FDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
                           M +  L  F+     + T ++L+G+G +V      A+G+ YL  
Sbjct: 96  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 147
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT--YGYMSPEY 650
            +  + +HRDL A N +LD+    K++DFG+AR     E  S   +        +M+ E 
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 206
Query: 651 AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL 710
            Q   F+ KSDV+SFGVLL E L ++    + + N+  +  +        +   L+ P  
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTFDITVYLL------QGRRLLQPEY 259
Query: 711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT 748
             +  Y        V L C    A  RP+  E+VS ++
Sbjct: 260 CPDPLY-------EVMLKCWHPKAEMRPSFSELVSRIS 290

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 70.5 bits (171), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 95/197 (48%), Gaps = 7/197 (3%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
           + + ++KLG G +G VY+G        VAVK L   + +  EEF  E  ++ +++H NLV
Sbjct: 12  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 70
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
           +                 M   +L  +L +  ++ +      + +   I+  + YL    
Sbjct: 71  QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYLE--- 126
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG 654
           +   IHRDL A N L+ ++   K++DFG++R+  GD   +          + +PE     
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAYN 185
Query: 655 LFSIKSDVFSFGVLLLE 671
            FSIKSDV++FGVLL E
Sbjct: 186 KFSIKSDVWAFGVLLWE 202

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 70.5 bits (171), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 21/214 (9%)
Query: 477 FSTENKLGEGGFGPVYKG-RLLNGQEVAVKRLSSQ-SGQGQEEFKNEIKLIAKLQHRNLV 534
           +  + +LG GGFG V +      G++VA+K+   + S + +E +  EI+++ KL H N+V
Sbjct: 17  WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENL--------LGWGTRVRIIEGIAQG 586
                             +P  ++++      ++ L        L  G    ++  I+  
Sbjct: 77  --SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA 134
Query: 587 LLYLHQYSRLRVIHRDLKASNILLD---KDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           L YLH+    R+IHRDLK  NI+L    + +  KI D G A+     EL ++    VGT 
Sbjct: 135 LRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTE---FVGTL 188
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKR 677
            Y++PE  +Q  +++  D +SFG L  E ++  R
Sbjct: 189 QYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 222

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 70.5 bits (171), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 126/278 (45%), Gaps = 35/278 (12%)
Query: 483 LGEGGFGPVYKGRLLN--GQEV--AVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNLVRXX 537
           +G G FG VY G LL+  G+++  AVK L+  +  G+  +F  E  ++    H N++   
Sbjct: 36  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 538 XX-XXXXXXXXXXXXXMPNKSLDFFL----FDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
                           M +  L  F+     + T ++L+G+G +V      A+G+ +L  
Sbjct: 96  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKFL-- 147
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT--YGYMSPEY 650
            +  + +HRDL A N +LD+    K++DFG+AR     E  S   +        +M+ E 
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 206
Query: 651 AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL 710
            Q   F+ KSDV+SFGVLL E L ++    + + N+  +  +        +   L+ P  
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTFDITVYLL------QGRRLLQPEY 259
Query: 711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT 748
             +  Y        V L C    A  RP+  E+VS ++
Sbjct: 260 CPDPLY-------EVMLKCWHPKAEMRPSFSELVSRIS 290

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 70.5 bits (171), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/278 (26%), Positives = 127/278 (45%), Gaps = 35/278 (12%)
Query: 483 LGEGGFGPVYKGRLLN--GQEV--AVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNLVRXX 537
           +G G FG VY G LL+  G+++  AVK L+  +  G+  +F  E  ++    H N++   
Sbjct: 97  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 538 XX-XXXXXXXXXXXXXMPNKSLDFFL----FDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
                           M +  L  F+     + T ++L+G+G +V      A+G+ +L  
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKFL-- 208
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG--TYGYMSPEY 650
            +  + +HRDL A N +LD+    K++DFG+AR     E  S   +        +M+ E 
Sbjct: 209 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 267
Query: 651 AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL 710
            Q   F+ KSDV+SFGVLL E L ++    + + N+  +  +        +   L+ P  
Sbjct: 268 LQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTFDITVYLL------QGRRLLQPEY 320
Query: 711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT 748
             +  Y ++       L C    A  RP+  E+VS ++
Sbjct: 321 CPDPLYEVM-------LKCWHPKAEMRPSFSELVSRIS 351

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 70.5 bits (171), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/278 (26%), Positives = 127/278 (45%), Gaps = 35/278 (12%)
Query: 483 LGEGGFGPVYKGRLLN--GQEV--AVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNLVRXX 537
           +G G FG VY G LL+  G+++  AVK L+  +  G+  +F  E  ++    H N++   
Sbjct: 43  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 538 XX-XXXXXXXXXXXXXMPNKSLDFFL----FDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
                           M +  L  F+     + T ++L+G+G +V      A+G+ +L  
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKFL-- 154
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT--YGYMSPEY 650
            +  + +HRDL A N +LD+    K++DFG+AR     E  S   +        +M+ E 
Sbjct: 155 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 213
Query: 651 AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL 710
            Q   F+ KSDV+SFGVLL E L ++    + + N+  +  +        +   L+ P  
Sbjct: 214 LQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTFDITVYLL------QGRRLLQPEY 266
Query: 711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT 748
             +  Y ++       L C    A  RP+  E+VS ++
Sbjct: 267 CPDPLYEVM-------LKCWHPKAEMRPSFSELVSRIS 297

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 70.5 bits (171), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 125/267 (46%), Gaps = 24/267 (8%)
Query: 467 LASVSAATANFSTENK---LGEGGFGPVYK-GRLLNGQEVAVKRLSSQSGQGQEEFKNEI 522
           + +   A  +F T +K   LG G FG V+K      G ++A K + ++  + +EE KNEI
Sbjct: 78  VTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEI 137
Query: 523 KLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEG 582
            ++ +L H NL++                 +    L   + D +  NL    T +  ++ 
Sbjct: 138 SVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESY-NLTELDT-ILFMKQ 195
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNIL-LDKDMNP-KISDFGMARIFGGDELQSKTKRIV 640
           I +G+ ++HQ   + ++H DLK  NIL +++D    KI DFG+AR +   E   K K   
Sbjct: 196 ICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE---KLKVNF 249
Query: 641 GTYGYMSPEYAQQGLFSIKSDVFSFGV---LLLETLSSKRNTDFSNTNSLTLLGHAWDLW 697
           GT  +++PE       S  +D++S GV   +LL  LS     + + T +  +L   WDL 
Sbjct: 250 GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLN-NILACRWDLE 308
Query: 698 KD------DRAWELIDPTLQNEASYLI 718
            +      + A E I   L  E S+ I
Sbjct: 309 DEEFQDISEEAKEFISKLLIKEKSWRI 335

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/278 (26%), Positives = 127/278 (45%), Gaps = 35/278 (12%)
Query: 483 LGEGGFGPVYKGRLLN--GQEV--AVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNLVRXX 537
           +G G FG VY G LL+  G+++  AVK L+  +  G+  +F  E  ++    H N++   
Sbjct: 38  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 538 XX-XXXXXXXXXXXXXMPNKSLDFFL----FDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
                           M +  L  F+     + T ++L+G+G +V      A+G+ +L  
Sbjct: 98  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKFL-- 149
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT--YGYMSPEY 650
            +  + +HRDL A N +LD+    K++DFG+AR     E  S   +        +M+ E 
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 651 AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL 710
            Q   F+ KSDV+SFGVLL E L ++    + + N+  +  +        +   L+ P  
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTFDITVYLL------QGRRLLQPEY 261
Query: 711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT 748
             +  Y ++       L C    A  RP+  E+VS ++
Sbjct: 262 CPDPLYEVM-------LKCWHPKAEMRPSFSELVSRIS 292

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/278 (26%), Positives = 127/278 (45%), Gaps = 35/278 (12%)
Query: 483 LGEGGFGPVYKGRLLN--GQEV--AVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNLVRXX 537
           +G G FG VY G LL+  G+++  AVK L+  +  G+  +F  E  ++    H N++   
Sbjct: 39  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 538 XX-XXXXXXXXXXXXXMPNKSLDFFL----FDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
                           M +  L  F+     + T ++L+G+G +V      A+G+ +L  
Sbjct: 99  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKFL-- 150
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT--YGYMSPEY 650
            +  + +HRDL A N +LD+    K++DFG+AR     E  S   +        +M+ E 
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 209
Query: 651 AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL 710
            Q   F+ KSDV+SFGVLL E L ++    + + N+  +  +        +   L+ P  
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTFDITVYLL------QGRRLLQPEY 262
Query: 711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT 748
             +  Y ++       L C    A  RP+  E+VS ++
Sbjct: 263 CPDPLYEVM-------LKCWHPKAEMRPSFSELVSRIS 293

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 98/199 (49%), Gaps = 10/199 (5%)
Query: 483 LGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQEEFKN---EIKLIAKLQHRNLVRXXX 538
           LG GGFG V+  ++   G+  A K+L+ +  + ++ ++    E K++AK+  R +V    
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 539 XXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTR-VRIIEGIAQGLLYLHQYSRLR 597
                         M    + + +++  ++N      R +     I  GL +LHQ +   
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN--- 309
Query: 598 VIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFS 657
           +I+RDLK  N+LLD D N +ISD G+A        Q+KTK   GT G+M+PE      + 
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG--QTKTKGYAGTPGFMAPELLLGEEYD 367
Query: 658 IKSDVFSFGVLLLETLSSK 676
              D F+ GV L E ++++
Sbjct: 368 FSVDYFALGVTLYEMIAAR 386

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/278 (26%), Positives = 127/278 (45%), Gaps = 35/278 (12%)
Query: 483 LGEGGFGPVYKGRLLN--GQEV--AVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNLVRXX 537
           +G G FG VY G LL+  G+++  AVK L+  +  G+  +F  E  ++    H N++   
Sbjct: 38  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 538 XX-XXXXXXXXXXXXXMPNKSLDFFL----FDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
                           M +  L  F+     + T ++L+G+G +V      A+G+ +L  
Sbjct: 98  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKFL-- 149
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT--YGYMSPEY 650
            +  + +HRDL A N +LD+    K++DFG+AR     E  S   +        +M+ E 
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 651 AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL 710
            Q   F+ KSDV+SFGVLL E L ++    + + N+  +  +        +   L+ P  
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTFDITVYLL------QGRRLLQPEY 261
Query: 711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT 748
             +  Y ++       L C    A  RP+  E+VS ++
Sbjct: 262 CPDPLYEVM-------LKCWHPKAEMRPSFSELVSRIS 292

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 98/199 (49%), Gaps = 10/199 (5%)
Query: 483 LGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQEEFKN---EIKLIAKLQHRNLVRXXX 538
           LG GGFG V+  ++   G+  A K+L+ +  + ++ ++    E K++AK+  R +V    
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 539 XXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTR-VRIIEGIAQGLLYLHQYSRLR 597
                         M    + + +++  ++N      R +     I  GL +LHQ +   
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN--- 309
Query: 598 VIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFS 657
           +I+RDLK  N+LLD D N +ISD G+A        Q+KTK   GT G+M+PE      + 
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG--QTKTKGYAGTPGFMAPELLLGEEYD 367
Query: 658 IKSDVFSFGVLLLETLSSK 676
              D F+ GV L E ++++
Sbjct: 368 FSVDYFALGVTLYEMIAAR 386

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 110/234 (47%), Gaps = 33/234 (14%)
Query: 481 NKLGEGGFGPVYKGRLL-----NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV- 534
           ++LG+G FG V   R        G  VAVK+L       Q +F+ EI+++  L    +V 
Sbjct: 13  SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 72
Query: 535 -RXXXXXXXXXXXXXXXXXMPNKSLDFFL------FDSTKENLLGWGTRVRIIEGIAQGL 587
            R                 +P+  L  FL       D+++  LL + ++      I +G+
Sbjct: 73  YRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASR--LLLYSSQ------ICKGM 124
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG--- 644
            YL   SR R +HRDL A NIL++ + + KI+DFG+A++   D    K   +V   G   
Sbjct: 125 EYLG--SR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLD----KDXXVVREPGQSP 177
Query: 645 --YMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDL 696
             + +PE     +FS +SDV+SFGV+L E  +    +   +   L ++G   D+
Sbjct: 178 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDV 231

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 98/199 (49%), Gaps = 10/199 (5%)
Query: 483 LGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQEEFKN---EIKLIAKLQHRNLVRXXX 538
           LG GGFG V+  ++   G+  A K+L+ +  + ++ ++    E K++AK+  R +V    
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 539 XXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTR-VRIIEGIAQGLLYLHQYSRLR 597
                         M    + + +++  ++N      R +     I  GL +LHQ +   
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN--- 309
Query: 598 VIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFS 657
           +I+RDLK  N+LLD D N +ISD G+A        Q+KTK   GT G+M+PE      + 
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG--QTKTKGYAGTPGFMAPELLLGEEYD 367
Query: 658 IKSDVFSFGVLLLETLSSK 676
              D F+ GV L E ++++
Sbjct: 368 FSVDYFALGVTLYEMIAAR 386

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 29/273 (10%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
           + + ++KLG G +G VY+G        VAVK L   + +  EEF  E  ++ +++H NLV
Sbjct: 221 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 279
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
           +                 M   +L  +L +  ++ +      + +   I+  + YL    
Sbjct: 280 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYL---E 335
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG 654
           +   IHR+L A N L+ ++   K++DFG++R+  GD   +          + +PE     
Sbjct: 336 KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 394
Query: 655 LFSIKSDVFSFGVLLLET----LSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL 710
            FSIKSDV++FGVLL E     +S     D S    L        L KD R   +  P  
Sbjct: 395 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL--------LEKDYR---MERPEG 443
Query: 711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEV 743
             E  Y ++         C Q + +DRP+  E+
Sbjct: 444 CPEKVYELMR-------ACWQWNPSDRPSFAEI 469

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 95/210 (45%), Gaps = 29/210 (13%)
Query: 483 LGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQE---EFKNEIKLIAKLQHRNLVRXXX 538
           LG GG   V+  R L + ++VAVK L +   +       F+ E +  A L H  +V    
Sbjct: 20  LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIV---- 75
Query: 539 XXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLL-------GWGTRVRIIEGIA---QGLL 588
                          P   L + + +      L       G  T  R IE IA   Q L 
Sbjct: 76  -----AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG--GDELQSKTKRIVGTYGYM 646
           + HQ     +IHRD+K +NI++      K+ DFG+AR     G+ + ++T  ++GT  Y+
Sbjct: 131 FSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV-TQTAAVIGTAQYL 186
Query: 647 SPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           SPE A+      +SDV+S G +L E L+ +
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGE 216

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 95/210 (45%), Gaps = 29/210 (13%)
Query: 483 LGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQE---EFKNEIKLIAKLQHRNLVRXXX 538
           LG GG   V+  R L + ++VAVK L +   +       F+ E +  A L H  +V    
Sbjct: 20  LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIV---- 75
Query: 539 XXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLL-------GWGTRVRIIEGIA---QGLL 588
                          P   L + + +      L       G  T  R IE IA   Q L 
Sbjct: 76  -----AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG--GDELQSKTKRIVGTYGYM 646
           + HQ     +IHRD+K +NI++      K+ DFG+AR     G+ + ++T  ++GT  Y+
Sbjct: 131 FSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV-TQTAAVIGTAQYL 186
Query: 647 SPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           SPE A+      +SDV+S G +L E L+ +
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGE 216

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 94/210 (44%), Gaps = 29/210 (13%)
Query: 483 LGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQE---EFKNEIKLIAKLQHRNLVRXXX 538
           LG GG   V+  R L + ++VAVK L +   +       F+ E +  A L H  +V    
Sbjct: 20  LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIV---- 75
Query: 539 XXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLL-------GWGTRVRIIEGIA---QGLL 588
                          P   L + + +      L       G  T  R IE IA   Q L 
Sbjct: 76  -----AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG--GDELQSKTKRIVGTYGYM 646
           + HQ     +IHRD+K +NIL+      K+ DFG+AR     G+ +  +T  ++GT  Y+
Sbjct: 131 FSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSV-XQTAAVIGTAQYL 186
Query: 647 SPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           SPE A+      +SDV+S G +L E L+ +
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGE 216

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 74/278 (26%), Positives = 127/278 (45%), Gaps = 35/278 (12%)
Query: 483 LGEGGFGPVYKGRLLN--GQEV--AVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNLVRXX 537
           +G G FG VY G LL+  G+++  AVK L+  +  G+  +F  E  ++    H N++   
Sbjct: 39  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 538 XX-XXXXXXXXXXXXXMPNKSLDFFL----FDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
                           M +  L  F+     + T ++L+G+G +V      A+G+ +L  
Sbjct: 99  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKFL-- 150
Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT--YGYMSPEY 650
            +  + +HRDL A N +LD+    K++DFG+AR     E  S   +        +M+ E 
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALES 209
Query: 651 AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL 710
            Q   F+ KSDV+SFGVLL E L ++    + + N+  +  +        +   L+ P  
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTFDITVYLL------QGRRLLQPEY 262
Query: 711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT 748
             +  Y ++       L C    A  RP+  E+VS ++
Sbjct: 263 CPDPLYEVM-------LKCWHPKAEMRPSFSELVSRIS 293

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 108/234 (46%), Gaps = 33/234 (14%)
Query: 481 NKLGEGGFGPVYKGRLL-----NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV- 534
           ++LG+G FG V   R        G  VAVK+L       Q +F+ EI+++  L    +V 
Sbjct: 16  SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 75
Query: 535 -RXXXXXXXXXXXXXXXXXMPNKSLDFFL------FDSTKENLLGWGTRVRIIEGIAQGL 587
            R                 +P+  L  FL       D+++  LL + ++      I +G+
Sbjct: 76  YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASR--LLLYSSQ------ICKGM 127
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG--- 644
            YL      R +HRDL A NIL++ + + KI+DFG+A++   D    K   +V   G   
Sbjct: 128 EYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD----KDYYVVREPGQSP 180
Query: 645 --YMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDL 696
             + +PE     +FS +SDV+SFGV+L E  +    +   +   L ++G   D+
Sbjct: 181 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGSERDV 234

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 69.3 bits (168), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 108/234 (46%), Gaps = 33/234 (14%)
Query: 481 NKLGEGGFGPVYKGRLL-----NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV- 534
           ++LG+G FG V   R        G  VAVK+L       Q +F+ EI+++  L    +V 
Sbjct: 17  SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 76
Query: 535 -RXXXXXXXXXXXXXXXXXMPNKSLDFFL------FDSTKENLLGWGTRVRIIEGIAQGL 587
            R                 +P+  L  FL       D+++  LL + ++      I +G+
Sbjct: 77  YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASR--LLLYSSQ------ICKGM 128
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG--- 644
            YL      R +HRDL A NIL++ + + KI+DFG+A++   D    K   +V   G   
Sbjct: 129 EYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD----KDYYVVREPGQSP 181
Query: 645 --YMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDL 696
             + +PE     +FS +SDV+SFGV+L E  +    +   +   L ++G   D+
Sbjct: 182 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDV 235

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 69.3 bits (168), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 121/285 (42%), Gaps = 46/285 (16%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQE-----VAVKRL-SSQSGQGQEEFKNEIKLIAKLQ 529
            F     LG G FG VYKG  +   E     VA+K L  + S +  +E  +E  ++A + 
Sbjct: 16  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKEN--------LLGWGTRVRIIE 581
           + ++ R                 MP   L     D  +E+        LL W  +     
Sbjct: 76  NPHVCRLLGICLTSTVQLITQL-MPFGCL----LDYVREHKDNIGSQYLLNWCVQ----- 125
Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            IA+G+ YL      R++HRDL A N+L+    + KI+DFG+A++ G +E +   +    
Sbjct: 126 -IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKD 699
              +M+ E     +++ +SDV+S+GV + E  T  SK       +   ++L         
Sbjct: 182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL--------- 232
Query: 700 DRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVV 744
           ++   L  P +     Y+I+ +       C   DA  RP   E++
Sbjct: 233 EKGERLPQPPICTIDVYMIMRK-------CWMIDADSRPKFRELI 270

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 69.3 bits (168), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 108/234 (46%), Gaps = 33/234 (14%)
Query: 481 NKLGEGGFGPVYKGRLL-----NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV- 534
           ++LG+G FG V   R        G  VAVK+L       Q +F+ EI+++  L    +V 
Sbjct: 29  SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 88
Query: 535 -RXXXXXXXXXXXXXXXXXMPNKSLDFFL------FDSTKENLLGWGTRVRIIEGIAQGL 587
            R                 +P+  L  FL       D+++  LL + ++      I +G+
Sbjct: 89  YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASR--LLLYSSQ------ICKGM 140
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG--- 644
            YL      R +HRDL A NIL++ + + KI+DFG+A++   D    K   +V   G   
Sbjct: 141 EYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD----KDYYVVREPGQSP 193
Query: 645 --YMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDL 696
             + +PE     +FS +SDV+SFGV+L E  +    +   +   L ++G   D+
Sbjct: 194 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDV 247

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 101/233 (43%), Gaps = 17/233 (7%)
Query: 473 ATANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKN--EIKLIAKLQ 529
           AT+ +    ++G G +G VYK R   +G  VA+K +   +G+         E+ L+ +L+
Sbjct: 2   ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 530 ---HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFL---FDSTKENLLGWGTRVRIIEGI 583
              H N+VR                 +  + +D  L    D      L   T   ++   
Sbjct: 62  AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
            +GL +LH      ++HRDLK  NIL+      K++DFG+ARI+     Q     +V T 
Sbjct: 122 LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALDPVVVTL 175
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDL 696
            Y +PE   Q  ++   D++S G +  E    +R   F   +    LG  +DL
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMF--RRKPLFCGNSEADQLGKIFDL 226

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 101/233 (43%), Gaps = 17/233 (7%)
Query: 473 ATANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKN--EIKLIAKLQ 529
           AT+ +    ++G G +G VYK R   +G  VA+K +   +G+         E+ L+ +L+
Sbjct: 2   ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 530 ---HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFL---FDSTKENLLGWGTRVRIIEGI 583
              H N+VR                 +  + +D  L    D      L   T   ++   
Sbjct: 62  AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
            +GL +LH      ++HRDLK  NIL+      K++DFG+ARI+     Q     +V T 
Sbjct: 122 LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALAPVVVTL 175
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDL 696
            Y +PE   Q  ++   D++S G +  E    +R   F   +    LG  +DL
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMF--RRKPLFCGNSEADQLGKIFDL 226

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 92/197 (46%), Gaps = 9/197 (4%)
Query: 481 NKLGEGGFGPVYKGRL-LNGQEVAVKRL-SSQSGQGQEEFKNEIKLIAKLQHRNLVRXXX 538
            ++G G FG V+ GRL  +   VAVK    +     + +F  E +++ +  H N+VR   
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 539 XXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRV 598
                         +  +  DF  F  T+   L   T ++++   A G+ YL        
Sbjct: 180 VCTQKQPIYIVMELV--QGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 599 IHRDLKASNILLDKDMNPKISDFGMARIFG-GDELQSKTKRIVGTYGYMSPEYAQQGLFS 657
           IHRDL A N L+ +    KISDFGM+R    G    S   R V    + +PE    G +S
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPV-KWTAPEALNYGRYS 293
Query: 658 IKSDVFSFGVLLLETLS 674
            +SDV+SFG+LL ET S
Sbjct: 294 SESDVWSFGILLWETFS 310

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 29/273 (10%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
           + + ++KLG G +G VY+G        VAVK L   + +  EEF  E  ++ +++H NLV
Sbjct: 260 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 318
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
           +                 M   +L  +L +  ++ +      + +   I+  + YL    
Sbjct: 319 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 374
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG 654
           +   IHR+L A N L+ ++   K++DFG++R+  GD   +          + +PE     
Sbjct: 375 KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYN 433
Query: 655 LFSIKSDVFSFGVLLLET----LSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL 710
            FSIKSDV++FGVLL E     +S     D S    L        L KD R   +  P  
Sbjct: 434 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL--------LEKDYR---MERPEG 482
Query: 711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEV 743
             E  Y ++         C Q + +DRP+  E+
Sbjct: 483 CPEKVYELMR-------ACWQWNPSDRPSFAEI 508

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 94/210 (44%), Gaps = 29/210 (13%)
Query: 483 LGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQE---EFKNEIKLIAKLQHRNLVRXXX 538
           LG GG   V+  R L   ++VAVK L +   +       F+ E +  A L H  +V    
Sbjct: 20  LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIV---- 75
Query: 539 XXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLL-------GWGTRVRIIEGIA---QGLL 588
                          P   L + + +      L       G  T  R IE IA   Q L 
Sbjct: 76  -----AVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG--GDELQSKTKRIVGTYGYM 646
           + HQ     +IHRD+K +NI++      K+ DFG+AR     G+ + ++T  ++GT  Y+
Sbjct: 131 FSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV-TQTAAVIGTAQYL 186
Query: 647 SPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           SPE A+      +SDV+S G +L E L+ +
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGE 216

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 121/285 (42%), Gaps = 46/285 (16%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQE-----VAVKRL-SSQSGQGQEEFKNEIKLIAKLQ 529
            F     LG G FG VYKG  +   E     VA+K L  + S +  +E  +E  ++A + 
Sbjct: 26  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKEN--------LLGWGTRVRIIE 581
           + ++ R                 MP   L     D  +E+        LL W  +     
Sbjct: 86  NPHVCRLLGICLTSTVQLITQL-MPFGCL----LDYVREHKDNIGSQYLLNWCVQ----- 135
Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            IA+G+ YL      R++HRDL A N+L+    + KI+DFG+A++ G +E +   +    
Sbjct: 136 -IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 191
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKD 699
              +M+ E     +++ +SDV+S+GV + E  T  SK       +   ++L         
Sbjct: 192 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL--------- 242
Query: 700 DRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVV 744
           ++   L  P +     Y+I+ +       C   DA  RP   E++
Sbjct: 243 EKGERLPQPPICTIDVYMIMRK-------CWMIDADSRPKFRELI 280

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 121/285 (42%), Gaps = 46/285 (16%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQE-----VAVKRL-SSQSGQGQEEFKNEIKLIAKLQ 529
            F     LG G FG VYKG  +   E     VA+K L  + S +  +E  +E  ++A + 
Sbjct: 19  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKEN--------LLGWGTRVRIIE 581
           + ++ R                 MP   L     D  +E+        LL W  +     
Sbjct: 79  NPHVCRLLGICLTSTVQLITQL-MPFGCL----LDYVREHKDNIGSQYLLNWCVQ----- 128
Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            IA+G+ YL      R++HRDL A N+L+    + KI+DFG+A++ G +E +   +    
Sbjct: 129 -IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKD 699
              +M+ E     +++ +SDV+S+GV + E  T  SK       +   ++L         
Sbjct: 185 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL--------- 235
Query: 700 DRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVV 744
           ++   L  P +     Y+I+ +       C   DA  RP   E++
Sbjct: 236 EKGERLPQPPICTIDVYMIMRK-------CWMIDADSRPKFRELI 273

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 24/213 (11%)
Query: 480 ENKLGEGGFGPVYKGRLLNG---QEVAVKRLSS-QSGQGQEEFKNEIKLIAKL-QHRNLV 534
           ++ +GEG FG V K R+       + A+KR+    S     +F  E++++ KL  H N++
Sbjct: 20  QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSL-DF------------FLFDSTKENLLGWGTRVRIIE 581
                              P+ +L DF            F   ++  + L     +    
Sbjct: 80  NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 139
Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            +A+G+ YL   S+ + IHRDL A NIL+ ++   KI+DFG++R   G E+  K      
Sbjct: 140 DVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRL 193
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
              +M+ E     +++  SDV+S+GVLL E +S
Sbjct: 194 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 103/224 (45%), Gaps = 18/224 (8%)
Query: 463 PMFSLASVSAATANFSTENKLGEGGFGPVYKG-RLLNGQEVAVKRLSSQ---SGQGQEEF 518
           P  SLA   A   N+     LGEG FG V        GQ+VA+K ++ +       Q   
Sbjct: 3   PKSSLAD-GAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRI 61
Query: 519 KNEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVR 578
           + EI  +  L+H ++++                   N+  D+ +    + + +      R
Sbjct: 62  EREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV----QRDKMSEQEARR 117
Query: 579 IIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF-GGDELQSKTK 637
             + I   + Y H++   +++HRDLK  N+LLD+ +N KI+DFG++ I   G+ L++   
Sbjct: 118 FFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC- 173
Query: 638 RIVGTYGYMSPEYAQQGLFS-IKSDVFSFGVLLLETLSSKRNTD 680
              G+  Y +PE     L++  + DV+S GV+L   L  +   D
Sbjct: 174 ---GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 214

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 103/224 (45%), Gaps = 18/224 (8%)
Query: 463 PMFSLASVSAATANFSTENKLGEGGFGPVYKG-RLLNGQEVAVKRLSSQ---SGQGQEEF 518
           P  SLA   A   N+     LGEG FG V        GQ+VA+K ++ +       Q   
Sbjct: 2   PKSSLAD-GAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRI 60
Query: 519 KNEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVR 578
           + EI  +  L+H ++++                   N+  D+ +    + + +      R
Sbjct: 61  EREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV----QRDKMSEQEARR 116
Query: 579 IIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF-GGDELQSKTK 637
             + I   + Y H++   +++HRDLK  N+LLD+ +N KI+DFG++ I   G+ L++   
Sbjct: 117 FFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC- 172
Query: 638 RIVGTYGYMSPEYAQQGLFS-IKSDVFSFGVLLLETLSSKRNTD 680
              G+  Y +PE     L++  + DV+S GV+L   L  +   D
Sbjct: 173 ---GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 213

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 87/169 (51%), Gaps = 25/169 (14%)
Query: 474 TANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFK----NEIKLIAKL 528
            + +    K+G+G FG V+K R    GQ+VA+K++  ++ +  E F      EIK++  L
Sbjct: 17  VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKILQLL 74
Query: 529 QHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRV----------R 578
           +H N+V                     K+  + +FD  + +L G  + V          R
Sbjct: 75  KHENVVNLIEICRTKASPYNRC-----KASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR 129
Query: 579 IIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF 627
           +++ +  GL Y+H   R +++HRD+KA+N+L+ +D   K++DFG+AR F
Sbjct: 130 VMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAF 175

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 92/197 (46%), Gaps = 10/197 (5%)
Query: 483 LGEGGFGPVYKGRLLNGQEVAV-KRL--SSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G   K R  +  ++ V K L   S +   ++   +E+ L+ +L+H N+VR    
Sbjct: 14  IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 540 XXXXXXXXXXXXXMPNKSLDF--FLFDSTKE-NLLGWGTRVRIIEGIAQGLLYLHQYSR- 595
                           +  D    +   TKE   L     +R++  +   L   H+ S  
Sbjct: 74  IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 596 -LRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG 654
              V+HRDLK +N+ LD   N K+ DFG+ARI   DE     K  VGT  YMSPE   + 
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDE--DFAKEFVGTPYYMSPEQMNRM 191
Query: 655 LFSIKSDVFSFGVLLLE 671
            ++ KSD++S G LL E
Sbjct: 192 SYNEKSDIWSLGCLLYE 208

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 121/285 (42%), Gaps = 46/285 (16%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQE-----VAVKRL-SSQSGQGQEEFKNEIKLIAKLQ 529
            F     LG G FG VYKG  +   E     VA+K L  + S +  +E  +E  ++A + 
Sbjct: 10  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKEN--------LLGWGTRVRIIE 581
           + ++ R                 MP   L     D  +E+        LL W  +     
Sbjct: 70  NPHVCRLLGICLTSTVQLITQL-MPFGCL----LDYVREHKDNIGSQYLLNWCVQ----- 119
Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            IA+G+ YL      R++HRDL A N+L+    + KI+DFG+A++ G +E +   +    
Sbjct: 120 -IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 175
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKD 699
              +M+ E     +++ +SDV+S+GV + E  T  SK       +   ++L         
Sbjct: 176 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL--------- 226
Query: 700 DRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVV 744
           ++   L  P +     Y+I+ +       C   DA  RP   E++
Sbjct: 227 EKGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFRELI 264

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 92/197 (46%), Gaps = 9/197 (4%)
Query: 481 NKLGEGGFGPVYKGRL-LNGQEVAVKRL-SSQSGQGQEEFKNEIKLIAKLQHRNLVRXXX 538
            ++G G FG V+ GRL  +   VAVK    +     + +F  E +++ +  H N+VR   
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 539 XXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRV 598
                         +  +  DF  F  T+   L   T ++++   A G+ YL        
Sbjct: 180 VCTQKQPIYIVMELV--QGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 599 IHRDLKASNILLDKDMNPKISDFGMARIFG-GDELQSKTKRIVGTYGYMSPEYAQQGLFS 657
           IHRDL A N L+ +    KISDFGM+R    G    S   R V    + +PE    G +S
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPV-KWTAPEALNYGRYS 293
Query: 658 IKSDVFSFGVLLLETLS 674
            +SDV+SFG+LL ET S
Sbjct: 294 SESDVWSFGILLWETFS 310

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 121/285 (42%), Gaps = 46/285 (16%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQE-----VAVKRL-SSQSGQGQEEFKNEIKLIAKLQ 529
            F     LG G FG VYKG  +   E     VA+K L  + S +  +E  +E  ++A + 
Sbjct: 13  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKEN--------LLGWGTRVRIIE 581
           + ++ R                 MP   L     D  +E+        LL W  +     
Sbjct: 73  NPHVCRLLGICLTSTVQLITQL-MPFGCL----LDYVREHKDNIGSQYLLNWCVQ----- 122
Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            IA+G+ YL      R++HRDL A N+L+    + KI+DFG+A++ G +E +   +    
Sbjct: 123 -IAEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 178
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKD 699
              +M+ E     +++ +SDV+S+GV + E  T  SK       +   ++L         
Sbjct: 179 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL--------- 229
Query: 700 DRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVV 744
           ++   L  P +     Y+I+ +       C   DA  RP   E++
Sbjct: 230 EKGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFRELI 267

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 26/207 (12%)
Query: 483 LGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXXX 541
           +G GGFG V+K +  ++G+   +KR+   +    E+ + E+K +AKL H N+V       
Sbjct: 19  IGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWD 74
Query: 542 XXXXXXXXXXXMPNKSLDFFLFDST----KENLLGWGTRVR-----------IIEGIAQG 586
                        ++S    LF       K  L  W  + R           + E I +G
Sbjct: 75  GFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKG 134
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           + Y+H     ++I+RDLK SNI L      KI DFG+      D    K  R  GT  YM
Sbjct: 135 VDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND---GKRXRSKGTLRYM 188
Query: 647 SPEYAQQGLFSIKSDVFSFGVLLLETL 673
           SPE      +  + D+++ G++L E L
Sbjct: 189 SPEQISSQDYGKEVDLYALGLILAELL 215

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 24/213 (11%)
Query: 480 ENKLGEGGFGPVYKGRLLNG---QEVAVKRLSS-QSGQGQEEFKNEIKLIAKL-QHRNLV 534
           ++ +GEG FG V K R+       + A+KR+    S     +F  E++++ KL  H N++
Sbjct: 30  QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSL-DF------------FLFDSTKENLLGWGTRVRIIE 581
                              P+ +L DF            F   ++  + L     +    
Sbjct: 90  NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149
Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            +A+G+ YL   S+ + IHRDL A NIL+ ++   KI+DFG++R   G E+  K      
Sbjct: 150 DVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRL 203
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
              +M+ E     +++  SDV+S+GVLL E +S
Sbjct: 204 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 120/282 (42%), Gaps = 40/282 (14%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQE-----VAVKRL-SSQSGQGQEEFKNEIKLIAKLQ 529
            F     LG G FG VYKG  +   E     VA+K L  + S +  +E  +E  ++A + 
Sbjct: 16  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKEN-----LLGWGTRVRIIEGIA 584
           + ++ R                      LD+      K+N     LL W  +      IA
Sbjct: 76  NPHVCRLLGICLTSTVQLITQLMPFGXLLDYV--REHKDNIGSQYLLNWCVQ------IA 127
Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG 644
           +G+ YL      R++HRDL A N+L+    + KI+DFG+A++ G +E +   +       
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 645 YMSPEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKDDRA 702
           +M+ E     +++ +SDV+S+GV + E  T  SK       +   ++L         ++ 
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL---------EKG 235
Query: 703 WELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVV 744
             L  P +     Y+I+ +       C   DA  RP   E++
Sbjct: 236 ERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFRELI 270

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 121/285 (42%), Gaps = 46/285 (16%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQE-----VAVKRL-SSQSGQGQEEFKNEIKLIAKLQ 529
            F     LG G FG VYKG  +   E     VA+K L  + S +  +E  +E  ++A + 
Sbjct: 20  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKEN--------LLGWGTRVRIIE 581
           + ++ R                 MP   L     D  +E+        LL W  +     
Sbjct: 80  NPHVCRLLGICLTSTVQLIMQL-MPFGCL----LDYVREHKDNIGSQYLLNWCVQ----- 129
Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            IA+G+ YL      R++HRDL A N+L+    + KI+DFG+A++ G +E +   +    
Sbjct: 130 -IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 185
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKD 699
              +M+ E     +++ +SDV+S+GV + E  T  SK       +   ++L         
Sbjct: 186 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL--------- 236
Query: 700 DRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVV 744
           ++   L  P +     Y+I+ +       C   DA  RP   E++
Sbjct: 237 EKGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFRELI 274

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 120/282 (42%), Gaps = 40/282 (14%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQE-----VAVKRL-SSQSGQGQEEFKNEIKLIAKLQ 529
            F     LG G FG VYKG  +   E     VA+K L  + S +  +E  +E  ++A + 
Sbjct: 17  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKEN-----LLGWGTRVRIIEGIA 584
           + ++ R                      LD+      K+N     LL W  +      IA
Sbjct: 77  NPHVCRLLGICLTSTVQLIMQLMPFGXLLDYV--REHKDNIGSQYLLNWCVQ------IA 128
Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG 644
           +G+ YL      R++HRDL A N+L+    + KI+DFG+A++ G +E +   +       
Sbjct: 129 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 185
Query: 645 YMSPEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKDDRA 702
           +M+ E     +++ +SDV+S+GV + E  T  SK       +   ++L         ++ 
Sbjct: 186 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL---------EKG 236
Query: 703 WELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVV 744
             L  P +     Y+I+ +       C   DA  RP   E++
Sbjct: 237 ERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFRELI 271

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 94/210 (44%), Gaps = 29/210 (13%)
Query: 483 LGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQE---EFKNEIKLIAKLQHRNLVRXXX 538
           LG GG   V+  R L   ++VAVK L +   +       F+ E +  A L H  +V    
Sbjct: 20  LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIV---- 75
Query: 539 XXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLL-------GWGTRVRIIEGIA---QGLL 588
                          P   L + + +      L       G  T  R IE IA   Q L 
Sbjct: 76  -----AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG--GDELQSKTKRIVGTYGYM 646
           + HQ     +IHRD+K +NI++      K+ DFG+AR     G+ + ++T  ++GT  Y+
Sbjct: 131 FSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV-TQTAAVIGTAQYL 186
Query: 647 SPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           SPE A+      +SDV+S G +L E L+ +
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGE 216

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 84/161 (52%), Gaps = 25/161 (15%)
Query: 482 KLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFK----NEIKLIAKLQHRNLVRX 536
           K+G+G FG V+K R    GQ+VA+K++  ++ +  E F      EIK++  L+H N+V  
Sbjct: 25  KIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKILQLLKHENVVNL 82
Query: 537 XXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRV----------RIIEGIAQG 586
                              K   + +FD  + +L G  + V          R+++ +  G
Sbjct: 83  IEICRTKASPYNRC-----KGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNG 137
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF 627
           L Y+H   R +++HRD+KA+N+L+ +D   K++DFG+AR F
Sbjct: 138 LYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAF 175

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 121/285 (42%), Gaps = 46/285 (16%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQE-----VAVKRL-SSQSGQGQEEFKNEIKLIAKLQ 529
            F     LG G FG VYKG  +   E     VA+K L  + S +  +E  +E  ++A + 
Sbjct: 19  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKEN--------LLGWGTRVRIIE 581
           + ++ R                 MP   L     D  +E+        LL W  +     
Sbjct: 79  NPHVCRLLGICLTSTVQLIMQL-MPFGCL----LDYVREHKDNIGSQYLLNWCVQ----- 128
Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            IA+G+ YL      R++HRDL A N+L+    + KI+DFG+A++ G +E +   +    
Sbjct: 129 -IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKD 699
              +M+ E     +++ +SDV+S+GV + E  T  SK       +   ++L         
Sbjct: 185 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL--------- 235
Query: 700 DRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVV 744
           ++   L  P +     Y+I+ +       C   DA  RP   E++
Sbjct: 236 EKGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFRELI 273

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 476 NFSTENKLGEGGFGPVYKGR---LLNGQE---VAVKRLSSQ-SGQGQEEFKNEIKLIAKL 528
           N      +GEG FG V++ R   LL  +    VAVK L  + S   Q +F+ E  L+A+ 
Sbjct: 48  NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF 107
Query: 529 QHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG-----WGTRVR----- 578
            + N+V+                 M    L+ FL   +   +         TR R     
Sbjct: 108 DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPG 167
Query: 579 -----------IIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-I 626
                      I   +A G+ YL   S  + +HRDL   N L+ ++M  KI+DFG++R I
Sbjct: 168 PPPLSCAEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSRNI 224
Query: 627 FGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           +  D  ++     +    +M PE      ++ +SDV+++GV+L E  S
Sbjct: 225 YSADYYKADGNDAIPI-RWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 121/285 (42%), Gaps = 46/285 (16%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQE-----VAVKRL-SSQSGQGQEEFKNEIKLIAKLQ 529
            F     LG G FG VYKG  +   E     VA+K L  + S +  +E  +E  ++A + 
Sbjct: 19  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKEN--------LLGWGTRVRIIE 581
           + ++ R                 MP   L     D  +E+        LL W  +     
Sbjct: 79  NPHVCRLLGICLTSTVQLITQL-MPFGCL----LDYVREHKDNIGSQYLLNWCVQ----- 128
Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            IA+G+ YL      R++HRDL A N+L+    + KI+DFG+A++ G +E +   +    
Sbjct: 129 -IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKD 699
              +M+ E     +++ +SDV+S+GV + E  T  SK       +   ++L         
Sbjct: 185 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL--------- 235
Query: 700 DRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVV 744
           ++   L  P +     Y+I+ +       C   DA  RP   E++
Sbjct: 236 EKGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFRELI 273

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 121/285 (42%), Gaps = 46/285 (16%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQE-----VAVKRL-SSQSGQGQEEFKNEIKLIAKLQ 529
            F     LG G FG VYKG  +   E     VA+K L  + S +  +E  +E  ++A + 
Sbjct: 18  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKEN--------LLGWGTRVRIIE 581
           + ++ R                 MP   L     D  +E+        LL W  +     
Sbjct: 78  NPHVCRLLGICLTSTVQLITQL-MPFGCL----LDYVREHKDNIGSQYLLNWCVQ----- 127
Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            IA+G+ YL      R++HRDL A N+L+    + KI+DFG+A++ G +E +   +    
Sbjct: 128 -IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 183
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKD 699
              +M+ E     +++ +SDV+S+GV + E  T  SK       +   ++L         
Sbjct: 184 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL--------- 234
Query: 700 DRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVV 744
           ++   L  P +     Y+I+ +       C   DA  RP   E++
Sbjct: 235 EKGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFRELI 272

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 121/285 (42%), Gaps = 46/285 (16%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQE-----VAVKRL-SSQSGQGQEEFKNEIKLIAKLQ 529
            F     LG G FG VYKG  +   E     VA+K L  + S +  +E  +E  ++A + 
Sbjct: 22  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKEN--------LLGWGTRVRIIE 581
           + ++ R                 MP   L     D  +E+        LL W  +     
Sbjct: 82  NPHVCRLLGICLTSTVQLITQL-MPFGCL----LDYVREHKDNIGSQYLLNWCVQ----- 131
Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            IA+G+ YL      R++HRDL A N+L+    + KI+DFG+A++ G +E +   +    
Sbjct: 132 -IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 187
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKD 699
              +M+ E     +++ +SDV+S+GV + E  T  SK       +   ++L         
Sbjct: 188 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL--------- 238
Query: 700 DRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVV 744
           ++   L  P +     Y+I+ +       C   DA  RP   E++
Sbjct: 239 EKGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFRELI 276

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 121/285 (42%), Gaps = 46/285 (16%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQE-----VAVKRL-SSQSGQGQEEFKNEIKLIAKLQ 529
            F     LG G FG VYKG  +   E     VA+K L  + S +  +E  +E  ++A + 
Sbjct: 16  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKEN--------LLGWGTRVRIIE 581
           + ++ R                 MP   L     D  +E+        LL W  +     
Sbjct: 76  NPHVCRLLGICLTSTVQLITQL-MPFGCL----LDYVREHKDNIGSQYLLNWCVQ----- 125
Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            IA+G+ YL      R++HRDL A N+L+    + KI+DFG+A++ G +E +   +    
Sbjct: 126 -IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKD 699
              +M+ E     +++ +SDV+S+GV + E  T  SK       +   ++L         
Sbjct: 182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL--------- 232
Query: 700 DRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVV 744
           ++   L  P +     Y+I+ +       C   DA  RP   E++
Sbjct: 233 EKGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFRELI 270

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 121/285 (42%), Gaps = 46/285 (16%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQE-----VAVKRL-SSQSGQGQEEFKNEIKLIAKLQ 529
            F     LG G FG VYKG  +   E     VA+K L  + S +  +E  +E  ++A + 
Sbjct: 17  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKEN--------LLGWGTRVRIIE 581
           + ++ R                 MP   L     D  +E+        LL W  +     
Sbjct: 77  NPHVCRLLGICLTSTVQLIMQL-MPFGCL----LDYVREHKDNIGSQYLLNWCVQ----- 126
Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            IA+G+ YL      R++HRDL A N+L+    + KI+DFG+A++ G +E +   +    
Sbjct: 127 -IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 182
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKD 699
              +M+ E     +++ +SDV+S+GV + E  T  SK       +   ++L         
Sbjct: 183 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL--------- 233
Query: 700 DRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVV 744
           ++   L  P +     Y+I+ +       C   DA  RP   E++
Sbjct: 234 EKGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFRELI 271

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 121/285 (42%), Gaps = 46/285 (16%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQE-----VAVKRL-SSQSGQGQEEFKNEIKLIAKLQ 529
            F     LG G FG VYKG  +   E     VA+K L  + S +  +E  +E  ++A + 
Sbjct: 19  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKEN--------LLGWGTRVRIIE 581
           + ++ R                 MP   L     D  +E+        LL W  +     
Sbjct: 79  NPHVCRLLGICLTSTVQLITQL-MPFGCL----LDYVREHKDNIGSQYLLNWCVQ----- 128
Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            IA+G+ YL      R++HRDL A N+L+    + KI+DFG+A++ G +E +   +    
Sbjct: 129 -IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKD 699
              +M+ E     +++ +SDV+S+GV + E  T  SK       +   ++L         
Sbjct: 185 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL--------- 235
Query: 700 DRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVV 744
           ++   L  P +     Y+I+ +       C   DA  RP   E++
Sbjct: 236 EKGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFRELI 273

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 11/198 (5%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
           LGEG +G V      +  + VAVK +  +      E  K EI + A L H N+V+     
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENL-LGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                            L    FD  + ++ +      R    +  G++YLH    + + 
Sbjct: 75  REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 127
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRD+K  N+LLD+  N KISDFG+A +F  +  +    ++ GT  Y++PE  ++  F  +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 660 S-DVFSFGVLLLETLSSK 676
             DV+S G++L   L+ +
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 121/285 (42%), Gaps = 46/285 (16%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQE-----VAVKRL-SSQSGQGQEEFKNEIKLIAKLQ 529
            F     LG G FG VYKG  +   E     VA+K L  + S +  +E  +E  ++A + 
Sbjct: 16  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKEN--------LLGWGTRVRIIE 581
           + ++ R                 MP   L     D  +E+        LL W  +     
Sbjct: 76  NPHVCRLLGICLTSTVQLIMQL-MPFGCL----LDYVREHKDNIGSQYLLNWCVQ----- 125
Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            IA+G+ YL      R++HRDL A N+L+    + KI+DFG+A++ G +E +   +    
Sbjct: 126 -IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKD 699
              +M+ E     +++ +SDV+S+GV + E  T  SK       +   ++L         
Sbjct: 182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL--------- 232
Query: 700 DRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVV 744
           ++   L  P +     Y+I+ +       C   DA  RP   E++
Sbjct: 233 EKGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFRELI 270

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 121/285 (42%), Gaps = 46/285 (16%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQE-----VAVKRL-SSQSGQGQEEFKNEIKLIAKLQ 529
            F     LG G FG VYKG  +   E     VA+K L  + S +  +E  +E  ++A + 
Sbjct: 18  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKEN--------LLGWGTRVRIIE 581
           + ++ R                 MP   L     D  +E+        LL W  +     
Sbjct: 78  NPHVCRLLGICLTSTVQLIMQL-MPFGCL----LDYVREHKDNIGSQYLLNWCVQ----- 127
Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            IA+G+ YL      R++HRDL A N+L+    + KI+DFG+A++ G +E +   +    
Sbjct: 128 -IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 183
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKD 699
              +M+ E     +++ +SDV+S+GV + E  T  SK       +   ++L         
Sbjct: 184 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL--------- 234
Query: 700 DRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVV 744
           ++   L  P +     Y+I+ +       C   DA  RP   E++
Sbjct: 235 EKGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFRELI 272

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 121/285 (42%), Gaps = 46/285 (16%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQE-----VAVKRL-SSQSGQGQEEFKNEIKLIAKLQ 529
            F     LG G FG VYKG  +   E     VA+K L  + S +  +E  +E  ++A + 
Sbjct: 23  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKEN--------LLGWGTRVRIIE 581
           + ++ R                 MP   L     D  +E+        LL W  +     
Sbjct: 83  NPHVCRLLGICLTSTVQLITQL-MPFGCL----LDYVREHKDNIGSQYLLNWCVQ----- 132
Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            IA+G+ YL      R++HRDL A N+L+    + KI+DFG+A++ G +E +   +    
Sbjct: 133 -IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 188
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKD 699
              +M+ E     +++ +SDV+S+GV + E  T  SK       +   ++L         
Sbjct: 189 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL--------- 239
Query: 700 DRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVV 744
           ++   L  P +     Y+I+ +       C   DA  RP   E++
Sbjct: 240 EKGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFRELI 277

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 121/285 (42%), Gaps = 46/285 (16%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQE-----VAVKRL-SSQSGQGQEEFKNEIKLIAKLQ 529
            F     LG G FG VYKG  +   E     VA+K L  + S +  +E  +E  ++A + 
Sbjct: 41  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKEN--------LLGWGTRVRIIE 581
           + ++ R                 MP   L     D  +E+        LL W  +     
Sbjct: 101 NPHVCRLLGICLTSTVQLITQL-MPFGCL----LDYVREHKDNIGSQYLLNWCVQ----- 150
Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            IA+G+ YL      R++HRDL A N+L+    + KI+DFG+A++ G +E +   +    
Sbjct: 151 -IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 206
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKD 699
              +M+ E     +++ +SDV+S+GV + E  T  SK       +   ++L         
Sbjct: 207 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL--------- 257
Query: 700 DRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVV 744
           ++   L  P +     Y+I+ +       C   DA  RP   E++
Sbjct: 258 EKGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFRELI 295

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 86/169 (50%), Gaps = 25/169 (14%)
Query: 474 TANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFK----NEIKLIAKL 528
            + +    K+G+G FG V+K R    GQ+VA+K++  ++ +  E F      EIK++  L
Sbjct: 16  VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKILQLL 73
Query: 529 QHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRV----------R 578
           +H N+V                     K   + +FD  + +L G  + V          R
Sbjct: 74  KHENVVNLIEICRTKASPYNRC-----KGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR 128
Query: 579 IIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF 627
           +++ +  GL Y+H   R +++HRD+KA+N+L+ +D   K++DFG+AR F
Sbjct: 129 VMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAF 174

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 101/233 (43%), Gaps = 17/233 (7%)
Query: 473 ATANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKN--EIKLIAKLQ 529
           AT+ +    ++G G +G VYK R   +G  VA+K +   +G+         E+ L+ +L+
Sbjct: 2   ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 530 ---HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFL---FDSTKENLLGWGTRVRIIEGI 583
              H N+VR                 +  + +D  L    D      L   T   ++   
Sbjct: 62  AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
            +GL +LH      ++HRDLK  NIL+      K++DFG+ARI+     Q     +V T 
Sbjct: 122 LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALFPVVVTL 175
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDL 696
            Y +PE   Q  ++   D++S G +  E    +R   F   +    LG  +DL
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMF--RRKPLFCGNSEADQLGKIFDL 226

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 86/169 (50%), Gaps = 25/169 (14%)
Query: 474 TANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFK----NEIKLIAKL 528
            + +    K+G+G FG V+K R    GQ+VA+K++  ++ +  E F      EIK++  L
Sbjct: 17  VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKILQLL 74
Query: 529 QHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRV----------R 578
           +H N+V                     K   + +FD  + +L G  + V          R
Sbjct: 75  KHENVVNLIEICRTKASPYNRC-----KGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR 129
Query: 579 IIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF 627
           +++ +  GL Y+H   R +++HRD+KA+N+L+ +D   K++DFG+AR F
Sbjct: 130 VMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAF 175

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 17/215 (7%)
Query: 472 AATANFSTENKLGEGGFGPVYKG-RLLNGQEVAVKRLSSQ---SGQGQEEFKNEIKLIAK 527
           A   N+     LGEG FG V        GQ+VA+K ++ +       Q   + EI  +  
Sbjct: 1   AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRL 60
Query: 528 LQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGL 587
           L+H ++++                   N+  D+ +    + + +      R  + I   +
Sbjct: 61  LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV----QRDKMSEQEARRFFQQIISAV 116
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF-GGDELQSKTKRIVGTYGYM 646
            Y H++   +++HRDLK  N+LLD+ +N KI+DFG++ I   G+ L++      G+  Y 
Sbjct: 117 EYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC----GSPNYA 169
Query: 647 SPEYAQQGLFS-IKSDVFSFGVLLLETLSSKRNTD 680
           +PE     L++  + DV+S GV+L   L  +   D
Sbjct: 170 APEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 204

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 67.8 bits (164), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 93/197 (47%), Gaps = 10/197 (5%)
Query: 483 LGEGGFGPVYKGRLLNGQEVAV-KRL--SSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G   K R  +  ++ V K L   S +   ++   +E+ L+ +L+H N+VR    
Sbjct: 14  IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 540 XXXXXXXXXXXXXMPNKSLDF--FLFDSTKE-NLLGWGTRVRIIEGIAQGLLYLHQYSR- 595
                           +  D    +   TKE   L     +R++  +   L   H+ S  
Sbjct: 74  IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 596 -LRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG 654
              V+HRDLK +N+ LD   N K+ DFG+ARI   D   +KT   VGT  YMSPE   + 
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT--FVGTPYYMSPEQMNRM 191
Query: 655 LFSIKSDVFSFGVLLLE 671
            ++ KSD++S G LL E
Sbjct: 192 SYNEKSDIWSLGCLLYE 208

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 67.8 bits (164), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 94/210 (44%), Gaps = 29/210 (13%)
Query: 483 LGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQE---EFKNEIKLIAKLQHRNLVRXXX 538
           LG GG   V+  R L   ++VAVK L +   +       F+ E +  A L H  +V    
Sbjct: 37  LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIV---- 92
Query: 539 XXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLL-------GWGTRVRIIEGIA---QGLL 588
                          P   L + + +      L       G  T  R IE IA   Q L 
Sbjct: 93  -----AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 147
Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG--GDELQSKTKRIVGTYGYM 646
           + HQ     +IHRD+K +NI++      K+ DFG+AR     G+ + ++T  ++GT  Y+
Sbjct: 148 FSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV-TQTAAVIGTAQYL 203
Query: 647 SPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           SPE A+      +SDV+S G +L E L+ +
Sbjct: 204 SPEQARGDSVDARSDVYSLGCVLYEVLTGE 233

>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 120/285 (42%), Gaps = 46/285 (16%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQE-----VAVKRL-SSQSGQGQEEFKNEIKLIAKLQ 529
            F     LG G FG VYKG  +   E     VA+K L  + S +  +E  +E  ++A + 
Sbjct: 18  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKEN--------LLGWGTRVRIIE 581
           + ++ R                 MP   L     D  +E+        LL W  +     
Sbjct: 78  NPHVCRLLGICLTSTVQLITQL-MPFGCL----LDYVREHKDNIGSQYLLNWCVQ----- 127
Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            IA+G+ YL      R++HRDL A N+L+    + KI+DFG A++ G +E +   +    
Sbjct: 128 -IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 183
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKD 699
              +M+ E     +++ +SDV+S+GV + E  T  SK       +   ++L         
Sbjct: 184 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL--------- 234
Query: 700 DRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVV 744
           ++   L  P +     Y+I+ +       C   DA  RP   E++
Sbjct: 235 EKGERLPQPPICTIDVYMIMRK-------CWMIDADSRPKFRELI 272

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 17/215 (7%)
Query: 472 AATANFSTENKLGEGGFGPVYKG-RLLNGQEVAVKRLSSQ---SGQGQEEFKNEIKLIAK 527
           A   N+     LGEG FG V        GQ+VA+K ++ +       Q   + EI  +  
Sbjct: 5   AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRL 64
Query: 528 LQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGL 587
           L+H ++++                   N+  D+ +    + + +      R  + I   +
Sbjct: 65  LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV----QRDKMSEQEARRFFQQIISAV 120
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF-GGDELQSKTKRIVGTYGYM 646
            Y H++   +++HRDLK  N+LLD+ +N KI+DFG++ I   G+ L++      G+  Y 
Sbjct: 121 EYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC----GSPNYA 173
Query: 647 SPEYAQQGLFS-IKSDVFSFGVLLLETLSSKRNTD 680
           +PE     L++  + DV+S GV+L   L  +   D
Sbjct: 174 APEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 208

>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 120/285 (42%), Gaps = 46/285 (16%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQE-----VAVKRL-SSQSGQGQEEFKNEIKLIAKLQ 529
            F     LG G FG VYKG  +   E     VA+K L  + S +  +E  +E  ++A + 
Sbjct: 18  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKEN--------LLGWGTRVRIIE 581
           + ++ R                 MP   L     D  +E+        LL W  +     
Sbjct: 78  NPHVCRLLGICLTSTVQLIMQL-MPFGCL----LDYVREHKDNIGSQYLLNWCVQ----- 127
Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            IA+G+ YL      R++HRDL A N+L+    + KI+DFG A++ G +E +   +    
Sbjct: 128 -IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 183
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKD 699
              +M+ E     +++ +SDV+S+GV + E  T  SK       +   ++L         
Sbjct: 184 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL--------- 234
Query: 700 DRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVV 744
           ++   L  P +     Y+I+ +       C   DA  RP   E++
Sbjct: 235 EKGERLPQPPICTIDVYMIMRK-------CWMIDADSRPKFRELI 272

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 98/198 (49%), Gaps = 17/198 (8%)
Query: 482 KLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
           +LG+G FG VYK +    G   A K + ++S +  E++  EI+++A   H  +V+     
Sbjct: 18  ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIH 600
                        P  ++D  + +  +  L     +V +   + + L +LH     R+IH
Sbjct: 78  YHDGKLWIMIEFCPGGAVDAIMLELDR-GLTEPQIQV-VCRQMLEALNFLHSK---RIIH 132
Query: 601 RDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKR--IVGTYGYMSPEYA-----QQ 653
           RDLKA N+L+  + + +++DFG++       L++  KR   +GT  +M+PE       + 
Sbjct: 133 RDLKAGNVLMTLEGDIRLADFGVS----AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 188
Query: 654 GLFSIKSDVFSFGVLLLE 671
             +  K+D++S G+ L+E
Sbjct: 189 TPYDYKADIWSLGITLIE 206

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 14/218 (6%)
Query: 477 FSTENKLGEGGFGPVYKGRLLNGQEV-AVKRLS-SQSGQGQEEFKNEIKLIAKLQHRNLV 534
           F+  +++G+G FG VYKG   + +EV A+K +   ++    E+ + EI ++++     + 
Sbjct: 21  FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 535 RXXXXXXXXXXXXXXXXXMPNKS-LDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY 593
           R                 +   S LD       +E  +       I+  I +GL YLH  
Sbjct: 81  RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIA-----TILREILKGLDYLHSE 135
Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQ 653
              R IHRD+KA+N+LL +  + K++DFG+A      + Q K    VGT  +M+PE  +Q
Sbjct: 136 ---RKIHRDIKAANVLLSEQGDVKLADFGVAGQL--TDTQIKRNXFVGTPFWMAPEVIKQ 190
Query: 654 GLFSIKSDVFSFGVLLLETLSSK-RNTDFSNTNSLTLL 690
             +  K+D++S G+  +E    +  N+D      L L+
Sbjct: 191 SAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLI 228

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 16/213 (7%)
Query: 472 AATANFSTENKLGEGGFGPVYKG-RLLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKL 528
           ++++ F    KLG G +  VYKG     G  VA+K  +L S+ G      + EI L+ +L
Sbjct: 2   SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIR-EISLMKEL 60
Query: 529 QHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIE----GIA 584
           +H N+VR                 M N    +   DS        G  + +++     + 
Sbjct: 61  KHENIVRLYDVIHTENKLTLVFEFMDNDLKKYM--DSRTVGNTPRGLELNLVKYFQWQLL 118
Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG 644
           QGL + H+    +++HRDLK  N+L++K    K+ DFG+AR F G  + + +  +V T  
Sbjct: 119 QGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAF-GIPVNTFSSEVV-TLW 173
Query: 645 YMSPEYAQQG-LFSIKSDVFSFGVLLLETLSSK 676
           Y +P+       +S   D++S G +L E ++ K
Sbjct: 174 YRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 92/197 (46%), Gaps = 10/197 (5%)
Query: 483 LGEGGFGPVYKGRLLNGQEVAV-KRL--SSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G   K R  +  ++ V K L   S +   ++   +E+ L+ +L+H N+VR    
Sbjct: 14  IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 540 XXXXXXXXXXXXXMPNKSLDF--FLFDSTKE-NLLGWGTRVRIIEGIAQGLLYLHQYSR- 595
                           +  D    +   TKE   L     +R++  +   L   H+ S  
Sbjct: 74  IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 596 -LRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG 654
              V+HRDLK +N+ LD   N K+ DFG+ARI   D   S  K  VGT  YMSPE   + 
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD--TSFAKAFVGTPYYMSPEQMNRM 191
Query: 655 LFSIKSDVFSFGVLLLE 671
            ++ KSD++S G LL E
Sbjct: 192 SYNEKSDIWSLGCLLYE 208

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 98/198 (49%), Gaps = 17/198 (8%)
Query: 482 KLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
           +LG+G FG VYK +    G   A K + ++S +  E++  EI+++A   H  +V+     
Sbjct: 26  ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIH 600
                        P  ++D  + +  +  L     +V +   + + L +LH     R+IH
Sbjct: 86  YHDGKLWIMIEFCPGGAVDAIMLELDR-GLTEPQIQV-VCRQMLEALNFLHSK---RIIH 140
Query: 601 RDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKR--IVGTYGYMSPEYA-----QQ 653
           RDLKA N+L+  + + +++DFG++       L++  KR   +GT  +M+PE       + 
Sbjct: 141 RDLKAGNVLMTLEGDIRLADFGVS----AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 196
Query: 654 GLFSIKSDVFSFGVLLLE 671
             +  K+D++S G+ L+E
Sbjct: 197 TPYDYKADIWSLGITLIE 214

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 9/234 (3%)
Query: 463 PMFSLASVSAATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQ-EEFKN 520
           P      V      ++  + +GEG +G V      LN   VA+K++S    Q   +    
Sbjct: 15  PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR 74
Query: 521 EIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRII 580
           EIK++ + +H N++                  +    ++  L+   K   L        +
Sbjct: 75  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 134
Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK-TKRI 639
             I +GL Y+H  +   V+HRDLK SN+LL+   + KI DFG+AR+   D   +      
Sbjct: 135 YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEX 191
Query: 640 VGTYGYMSPEYAQQGLFSIKS-DVFSFGVLLLETLSSKRNTDFSNTNSLTLLGH 692
           V T  Y +PE         KS D++S G +L E LS++    F   + L  L H
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR--PIFPGKHYLDQLNH 243

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 96/226 (42%), Gaps = 13/226 (5%)
Query: 466 SLASVSAATANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRL--SSQSGQGQEEFKNEI 522
           S A       N+     +G+G F  V   R +L G+EVA+K +  +  +    ++   E+
Sbjct: 6   SCADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREV 65
Query: 523 KLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEG 582
           +++  L H N+V+                      +  +L    +       ++ R I  
Sbjct: 66  RIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS 125
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
             Q   Y HQ    R++HRDLKA N+LLD DMN KI+DFG +  F    +  K     G 
Sbjct: 126 AVQ---YCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEF---TVGGKLDAFCGA 176
Query: 643 YGYMSPEYAQQGLF-SIKSDVFSFGVLLLETLSSKRNTDFSNTNSL 687
             Y +PE  Q   +   + DV+S GV+L   +S     D  N   L
Sbjct: 177 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 222

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 9/234 (3%)
Query: 463 PMFSLASVSAATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQ-EEFKN 520
           P      V      ++  + +GEG +G V      LN   VA+K++S    Q   +    
Sbjct: 16  PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR 75
Query: 521 EIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRII 580
           EIK++ + +H N++                  +    ++  L+   K   L        +
Sbjct: 76  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 135
Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK-TKRI 639
             I +GL Y+H  +   V+HRDLK SN+LL+   + KI DFG+AR+   D   +      
Sbjct: 136 YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEX 192
Query: 640 VGTYGYMSPEYAQQGLFSIKS-DVFSFGVLLLETLSSKRNTDFSNTNSLTLLGH 692
           V T  Y +PE         KS D++S G +L E LS++    F   + L  L H
Sbjct: 193 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR--PIFPGKHYLDQLNH 244

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 9/234 (3%)
Query: 463 PMFSLASVSAATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQ-EEFKN 520
           P      V      ++  + +GEG +G V      LN   VA+K++S    Q   +    
Sbjct: 9   PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR 68
Query: 521 EIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRII 580
           EIK++ + +H N++                  +    ++  L+   K   L        +
Sbjct: 69  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 128
Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK-TKRI 639
             I +GL Y+H  +   V+HRDLK SN+LL+   + KI DFG+AR+   D   +      
Sbjct: 129 YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 185
Query: 640 VGTYGYMSPEYAQQGLFSIKS-DVFSFGVLLLETLSSKRNTDFSNTNSLTLLGH 692
           V T  Y +PE         KS D++S G +L E LS++    F   + L  L H
Sbjct: 186 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR--PIFPGKHYLDQLNH 237

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 9/234 (3%)
Query: 463 PMFSLASVSAATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQ-EEFKN 520
           P      V      ++  + +GEG +G V      LN   VA+K++S    Q   +    
Sbjct: 16  PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR 75
Query: 521 EIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRII 580
           EIK++ + +H N++                  +    ++  L+   K   L        +
Sbjct: 76  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 135
Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK-TKRI 639
             I +GL Y+H  +   V+HRDLK SN+LL+   + KI DFG+AR+   D   +      
Sbjct: 136 YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 192
Query: 640 VGTYGYMSPEYAQQGLFSIKS-DVFSFGVLLLETLSSKRNTDFSNTNSLTLLGH 692
           V T  Y +PE         KS D++S G +L E LS++    F   + L  L H
Sbjct: 193 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR--PIFPGKHYLDQLNH 244

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 9/234 (3%)
Query: 463 PMFSLASVSAATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQ-EEFKN 520
           P      V      ++  + +GEG +G V      LN   VA+K++S    Q   +    
Sbjct: 9   PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR 68
Query: 521 EIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRII 580
           EIK++ + +H N++                  +    ++  L+   K   L        +
Sbjct: 69  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 128
Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK-TKRI 639
             I +GL Y+H  +   V+HRDLK SN+LL+   + KI DFG+AR+   D   +      
Sbjct: 129 YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 185
Query: 640 VGTYGYMSPEYAQQGLFSIKS-DVFSFGVLLLETLSSKRNTDFSNTNSLTLLGH 692
           V T  Y +PE         KS D++S G +L E LS++    F   + L  L H
Sbjct: 186 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR--PIFPGKHYLDQLNH 237

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 9/234 (3%)
Query: 463 PMFSLASVSAATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQ-EEFKN 520
           P      V      ++  + +GEG +G V      LN   VA+K++S    Q   +    
Sbjct: 17  PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR 76
Query: 521 EIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRII 580
           EIK++ + +H N++                  +    ++  L+   K   L        +
Sbjct: 77  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 136
Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK-TKRI 639
             I +GL Y+H  +   V+HRDLK SN+LL+   + KI DFG+AR+   D   +      
Sbjct: 137 YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 193
Query: 640 VGTYGYMSPEYAQQGLFSIKS-DVFSFGVLLLETLSSKRNTDFSNTNSLTLLGH 692
           V T  Y +PE         KS D++S G +L E LS++    F   + L  L H
Sbjct: 194 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR--PIFPGKHYLDQLNH 245

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 9/234 (3%)
Query: 463 PMFSLASVSAATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQ-EEFKN 520
           P      V      ++  + +GEG +G V      LN   VA+K++S    Q   +    
Sbjct: 8   PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR 67
Query: 521 EIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRII 580
           EIK++ + +H N++                  +    ++  L+   K   L        +
Sbjct: 68  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 127
Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK-TKRI 639
             I +GL Y+H  +   V+HRDLK SN+LL+   + KI DFG+AR+   D   +      
Sbjct: 128 YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 184
Query: 640 VGTYGYMSPEYAQQGLFSIKS-DVFSFGVLLLETLSSKRNTDFSNTNSLTLLGH 692
           V T  Y +PE         KS D++S G +L E LS++    F   + L  L H
Sbjct: 185 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR--PIFPGKHYLDQLNH 236

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 9/234 (3%)
Query: 463 PMFSLASVSAATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQ-EEFKN 520
           P      V      ++  + +GEG +G V      LN   VA+K++S    Q   +    
Sbjct: 15  PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR 74
Query: 521 EIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRII 580
           EIK++ + +H N++                  +    ++  L+   K   L        +
Sbjct: 75  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 134
Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK-TKRI 639
             I +GL Y+H  +   V+HRDLK SN+LL+   + KI DFG+AR+   D   +      
Sbjct: 135 YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 640 VGTYGYMSPEYAQQGLFSIKS-DVFSFGVLLLETLSSKRNTDFSNTNSLTLLGH 692
           V T  Y +PE         KS D++S G +L E LS++    F   + L  L H
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR--PIFPGKHYLDQLNH 243

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 16/199 (8%)
Query: 481 NKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQE---EFKNEIKLIAKLQHRNLVRX 536
           + LG G FG V  G+  L G +VAVK L+ Q  +  +   + + EI+ +   +H ++++ 
Sbjct: 22  DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 537 XXXXXXXXXXXXXXXXMPNKSLDFFLFDST-KENLLGWGTRVRIIEGIAQGLLYLHQYSR 595
                           +    L    FD   K   L      R+ + I  G+ Y H++  
Sbjct: 82  YQVISTPSDIFMVMEYVSGGEL----FDYICKNGRLDEKESRRLFQQILSGVDYCHRHM- 136
Query: 596 LRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGL 655
             V+HRDLK  N+LLD  MN KI+DFG++ +    E    +    G+  Y +PE     L
Sbjct: 137 --VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXS---CGSPNYAAPEVISGRL 191
Query: 656 FS-IKSDVFSFGVLLLETL 673
           ++  + D++S GV+L   L
Sbjct: 192 YAGPEVDIWSSGVILYALL 210

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 7/218 (3%)
Query: 463 PMFSLASVSAATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQ-EEFKN 520
           P      V      ++  + +GEG +G V      LN   VA+K++S    Q   +    
Sbjct: 15  PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR 74
Query: 521 EIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRII 580
           EIK++ + +H N++                  +    ++  L+   K   L        +
Sbjct: 75  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 134
Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK-TKRI 639
             I +GL Y+H  +   V+HRDLK SN+LL+   + KI DFG+AR+   D   +      
Sbjct: 135 YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 640 VGTYGYMSPEYAQQGLFSIKS-DVFSFGVLLLETLSSK 676
           V T  Y +PE         KS D++S G +L E LS++
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229

>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 120/285 (42%), Gaps = 46/285 (16%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQE-----VAVKRL-SSQSGQGQEEFKNEIKLIAKLQ 529
            F     LG G FG VYKG  +   E     VA+K L  + S +  +E  +E  ++A + 
Sbjct: 20  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKEN--------LLGWGTRVRIIE 581
           + ++ R                 MP   L     D  +E+        LL W  +     
Sbjct: 80  NPHVCRLLGICLTSTVQLIMQL-MPFGCL----LDYVREHKDNIGSQYLLNWCVQ----- 129
Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            IA+G+ YL      R++HRDL A N+L+    + KI+DFG A++ G +E +   +    
Sbjct: 130 -IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 185
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKD 699
              +M+ E     +++ +SDV+S+GV + E  T  SK       +   ++L         
Sbjct: 186 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL--------- 236
Query: 700 DRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVV 744
           ++   L  P +     Y+I+ +       C   DA  RP   E++
Sbjct: 237 EKGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFRELI 274

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 122/280 (43%), Gaps = 31/280 (11%)
Query: 475 ANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSS---QSGQGQEEFKNEIKLIAKLQH 530
            N+     +G+G F  V   R +L G+EVAVK +      S   Q+ F+ E++++  L H
Sbjct: 14  GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNH 72
Query: 531 RNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYL 590
            N+V+                      +  +L    +        + R I    Q   Y 
Sbjct: 73  PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ---YC 129
Query: 591 HQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG-GDELQSKTKRIVGTYGYMSPE 649
           HQ     ++HRDLKA N+LLD DMN KI+DFG +  F  G++L +      G+  Y +PE
Sbjct: 130 HQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT----FCGSPPYAAPE 182
Query: 650 YAQQGLF-SIKSDVFSFGVLLLETLSSKRNTDFSNTNSL---TLLGH-------AWDLWK 698
             Q   +   + DV+S GV+L   +S     D  N   L    L G        + D   
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCEN 242
Query: 699 DDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRP 738
             + + +++P+ +     ++ +R++NVG     ED   +P
Sbjct: 243 LLKKFLILNPSKRGTLEQIMKDRWMNVG----HEDDELKP 278

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 7/218 (3%)
Query: 463 PMFSLASVSAATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQG-QEEFKN 520
           P      V      ++  + +GEG +G V      LN   VA+K++S    Q   +    
Sbjct: 15  PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLR 74
Query: 521 EIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRII 580
           EIK++ + +H N++                  +    ++  L+   K   L        +
Sbjct: 75  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 134
Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK-TKRI 639
             I +GL Y+H  +   V+HRDLK SN+LL+   + KI DFG+AR+   D   +      
Sbjct: 135 YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 640 VGTYGYMSPEYAQQGLFSIKS-DVFSFGVLLLETLSSK 676
           V T  Y +PE         KS D++S G +L E LS++
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 101/229 (44%), Gaps = 19/229 (8%)
Query: 469 SVSAAT------ANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRL--SSQSGQGQEEFK 519
           S+++AT       N+  +  +G+G F  V   R +L G+EVAVK +  +  +    ++  
Sbjct: 3   SITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLF 62
Query: 520 NEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRI 579
            E++++  L H N+V+                      +  +L    +        + R 
Sbjct: 63  REVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ 122
Query: 580 IEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRI 639
           I    Q   Y HQ     ++HRDLKA N+LLD DMN KI+DFG +  F    + +K    
Sbjct: 123 IVSAVQ---YCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEF---TVGNKLDTF 173
Query: 640 VGTYGYMSPEYAQQGLF-SIKSDVFSFGVLLLETLSSKRNTDFSNTNSL 687
            G+  Y +PE  Q   +   + DV+S GV+L   +S     D  N   L
Sbjct: 174 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 222

>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 120/285 (42%), Gaps = 46/285 (16%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQE-----VAVKRL-SSQSGQGQEEFKNEIKLIAKLQ 529
            F     LG G FG VYKG  +   E     VA+K L  + S +  +E  +E  ++A + 
Sbjct: 18  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKEN--------LLGWGTRVRIIE 581
           + ++ R                 MP   L     D  +E+        LL W  +     
Sbjct: 78  NPHVCRLLGICLTSTVQLIMQL-MPFGCL----LDYVREHKDNIGSQYLLNWCVQ----- 127
Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            IA+G+ YL      R++HRDL A N+L+    + KI+DFG A++ G +E +   +    
Sbjct: 128 -IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 183
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKD 699
              +M+ E     +++ +SDV+S+GV + E  T  SK       +   ++L         
Sbjct: 184 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL--------- 234
Query: 700 DRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVV 744
           ++   L  P +     Y+I+ +       C   DA  RP   E++
Sbjct: 235 EKGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFRELI 272

>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 120/285 (42%), Gaps = 46/285 (16%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQE-----VAVKRL-SSQSGQGQEEFKNEIKLIAKLQ 529
            F     LG G FG VYKG  +   E     VA+K L  + S +  +E  +E  ++A + 
Sbjct: 16  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKEN--------LLGWGTRVRIIE 581
           + ++ R                 MP   L     D  +E+        LL W  +     
Sbjct: 76  NPHVCRLLGICLTSTVQLITQL-MPFGCL----LDYVREHKDNIGSQYLLNWCVQ----- 125
Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            IA+G+ YL      R++HRDL A N+L+    + KI+DFG A++ G +E +   +    
Sbjct: 126 -IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 181
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKD 699
              +M+ E     +++ +SDV+S+GV + E  T  SK       +   ++L         
Sbjct: 182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL--------- 232
Query: 700 DRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVV 744
           ++   L  P +     Y+I+ +       C   DA  RP   E++
Sbjct: 233 EKGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFRELI 270

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 11/198 (5%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
           LGEG +G V      +  + VAVK +  +      E  K EI +   L H N+V+     
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENL-LGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                            L    FD  + ++ +      R    +  G++YLH    + + 
Sbjct: 74  REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRD+K  N+LLD+  N KISDFG+A +F  +  +    ++ GT  Y++PE  ++  F  +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 660 S-DVFSFGVLLLETLSSK 676
             DV+S G++L   L+ +
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFK---NEIKLIAKLQHR 531
           +F     LGEG F  V   R L   +E A+K L  +    + +      E  ++++L H 
Sbjct: 33  DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 532 NLVRXXXXXXXXXXXXXXXXXMPNKSLDFFL-----FDSTKENLLGWGTRVRIIEGIAQG 586
             V+                   N  L  ++     FD T        TR    E I   
Sbjct: 93  FFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDET-------CTRFYTAE-IVSA 144
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L YLH      +IHRDLK  NILL++DM+ +I+DFG A++   +  Q++    VGT  Y+
Sbjct: 145 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV 201
Query: 647 SPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           SPE   +   S  SD+++ G ++ + ++
Sbjct: 202 SPELLTEKSASKSSDLWALGCIIYQLVA 229

>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 120/285 (42%), Gaps = 46/285 (16%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQE-----VAVKRL-SSQSGQGQEEFKNEIKLIAKLQ 529
            F     LG G FG VYKG  +   E     VA+K L  + S +  +E  +E  ++A + 
Sbjct: 23  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKEN--------LLGWGTRVRIIE 581
           + ++ R                 MP   L     D  +E+        LL W  +     
Sbjct: 83  NPHVCRLLGICLTSTVQLITQL-MPFGCL----LDYVREHKDNIGSQYLLNWCVQ----- 132
Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            IA+G+ YL      R++HRDL A N+L+    + KI+DFG A++ G +E +   +    
Sbjct: 133 -IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 188
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKD 699
              +M+ E     +++ +SDV+S+GV + E  T  SK       +   ++L         
Sbjct: 189 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL--------- 239
Query: 700 DRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVV 744
           ++   L  P +     Y+I+ +       C   DA  RP   E++
Sbjct: 240 EKGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFRELI 277

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 122/280 (43%), Gaps = 31/280 (11%)
Query: 475 ANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSS---QSGQGQEEFKNEIKLIAKLQH 530
            N+     +G+G F  V   R +L G+EVAVK +      S   Q+ F+ E++++  L H
Sbjct: 14  GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNH 72
Query: 531 RNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYL 590
            N+V+                      +  +L    +        + R I    Q   Y 
Sbjct: 73  PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ---YC 129
Query: 591 HQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG-GDELQSKTKRIVGTYGYMSPE 649
           HQ     ++HRDLKA N+LLD DMN KI+DFG +  F  G++L +      G+  Y +PE
Sbjct: 130 HQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT----FCGSPPYAAPE 182
Query: 650 YAQQGLF-SIKSDVFSFGVLLLETLSSKRNTDFSNTNSL---TLLGH-------AWDLWK 698
             Q   +   + DV+S GV+L   +S     D  N   L    L G        + D   
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCEN 242
Query: 699 DDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRP 738
             + + +++P+ +     ++ +R++NVG     ED   +P
Sbjct: 243 LLKKFLILNPSKRGTLEQIMKDRWMNVG----HEDDELKP 278

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 99/213 (46%), Gaps = 24/213 (11%)
Query: 480 ENKLGEGGFGPVYKGRLLNG---QEVAVKRLSS-QSGQGQEEFKNEIKLIAKL-QHRNLV 534
           ++ +GEG FG V K R+       + A+KR+    S     +F  E++++ KL  H N++
Sbjct: 27  QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSL-DF------------FLFDSTKENLLGWGTRVRIIE 581
                              P+ +L DF            F   ++  + L     +    
Sbjct: 87  NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 146
Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            +A+G+ YL   S+ + IHR+L A NIL+ ++   KI+DFG++R   G E+  K      
Sbjct: 147 DVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRL 200
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
              +M+ E     +++  SDV+S+GVLL E +S
Sbjct: 201 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 11/198 (5%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
           LGEG +G V      +  + VAVK +  +      E  K EI +   L H N+V+     
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENL-LGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                            L    FD  + ++ +      R    +  G++YLH    + + 
Sbjct: 74  REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRD+K  N+LLD+  N KISDFG+A +F  +  +    ++ GT  Y++PE  ++  F  +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 660 S-DVFSFGVLLLETLSSK 676
             DV+S G++L   L+ +
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 9/234 (3%)
Query: 463 PMFSLASVSAATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQ-EEFKN 520
           P      V      ++  + +GEG +G V      LN   VA+K++S    Q   +    
Sbjct: 15  PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR 74
Query: 521 EIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRII 580
           EIK++ + +H N++                  +    ++  L+   K   L        +
Sbjct: 75  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFL 134
Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK-TKRI 639
             I +GL Y+H  +   V+HRDLK SN+LL+   + KI DFG+AR+   D   +      
Sbjct: 135 YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 640 VGTYGYMSPEYAQQGLFSIKS-DVFSFGVLLLETLSSKRNTDFSNTNSLTLLGH 692
           V T  Y +PE         KS D++S G +L E LS++    F   + L  L H
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR--PIFPGKHYLDQLNH 243

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 11/198 (5%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
           LGEG +G V      +  + VAVK +  +      E  K EI +   L H N+V+     
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENL-LGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                            L    FD  + ++ +      R    +  G++YLH    + + 
Sbjct: 74  REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRD+K  N+LLD+  N KISDFG+A +F  +  +    ++ GT  Y++PE  ++  F  +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 660 S-DVFSFGVLLLETLSSK 676
             DV+S G++L   L+ +
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 20/200 (10%)
Query: 477 FSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEE-FKNEIKLIAKLQHRNLV 534
           F  +  LG G F  V        G+  AVK +  ++ +G+E   +NEI ++ K++H N+V
Sbjct: 24  FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTR---VRIIEGIAQGLLYLH 591
                             +        LFD   E   G+ T      +I  +   + YLH
Sbjct: 84  ALEDIYESPNHLYLVMQLVSGGE----LFDRIVEK--GFYTEKDASTLIRQVLDAVYYLH 137
Query: 592 QYSRLRVIHRDLKASNILL---DKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSP 648
              R+ ++HRDLK  N+L    D++    ISDFG++++ G  ++ S      GT GY++P
Sbjct: 138 ---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTA---CGTPGYVAP 191
Query: 649 EYAQQGLFSIKSDVFSFGVL 668
           E   Q  +S   D +S GV+
Sbjct: 192 EVLAQKPYSKAVDCWSIGVI 211

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 95/217 (43%), Gaps = 13/217 (5%)
Query: 475 ANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRL--SSQSGQGQEEFKNEIKLIAKLQHR 531
            N+     +G+G F  V   R +L G+EVA+K +  +  +    ++   E++++  L H 
Sbjct: 12  GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHP 71
Query: 532 NLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH 591
           N+V+                      +  +L    +       ++ R I    Q   Y H
Sbjct: 72  NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQ---YCH 128
Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYA 651
           Q    R++HRDLKA N+LLD DMN KI+DFG +  F    +  K     G+  Y +PE  
Sbjct: 129 QK---RIVHRDLKAENLLLDADMNIKIADFGFSNEF---TVGGKLDTFCGSPPYAAPELF 182
Query: 652 QQGLF-SIKSDVFSFGVLLLETLSSKRNTDFSNTNSL 687
           Q   +   + DV+S GV+L   +S     D  N   L
Sbjct: 183 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 219

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 11/198 (5%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
           LGEG +G V      +  + VAVK +  +      E  K EI +   L H N+V+     
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENL-LGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                            L    FD  + ++ +      R    +  G++YLH    + + 
Sbjct: 75  REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 127
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRD+K  N+LLD+  N KISDFG+A +F  +  +    ++ GT  Y++PE  ++  F  +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 660 S-DVFSFGVLLLETLSSK 676
             DV+S G++L   L+ +
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 11/198 (5%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
           LGEG +G V      +  + VAVK +  +      E  K EI +   L H N+V+     
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENL-LGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                            L    FD  + ++ +      R    +  G++YLH    + + 
Sbjct: 74  REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRD+K  N+LLD+  N KISDFG+A +F  +  +    ++ GT  Y++PE  ++  F  +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 660 S-DVFSFGVLLLETLSSK 676
             DV+S G++L   L+ +
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 118/279 (42%), Gaps = 29/279 (10%)
Query: 475 ANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSS---QSGQGQEEFKNEIKLIAKLQH 530
            N+     +G+G F  V   R +L G+EVAVK +      S   Q+ F+ E++++  L H
Sbjct: 14  GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNH 72
Query: 531 RNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYL 590
            N+V+                      +  +L    +        + R I    Q   Y 
Sbjct: 73  PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ---YC 129
Query: 591 HQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEY 650
           HQ     ++HRDLKA N+LLD DMN KI+DFG +  F      +K     G   Y +PE 
Sbjct: 130 HQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF---TFGNKLDAFCGAPPYAAPEL 183
Query: 651 AQQGLF-SIKSDVFSFGVLLLETLSSKRNTDFSNTNSL---TLLGH-------AWDLWKD 699
            Q   +   + DV+S GV+L   +S     D  N   L    L G        + D    
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENL 243
Query: 700 DRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRP 738
            + + +++P+ +     ++ +R++NVG     ED   +P
Sbjct: 244 LKKFLILNPSKRGTLEQIMKDRWMNVG----HEDDELKP 278

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 113/274 (41%), Gaps = 30/274 (10%)
Query: 483 LGEGGFGPVYKGRLLNGQ----EVAVKRLSSQ-SGQGQEEFKNEIKLIAKLQHRNLVRXX 537
           LGEG FG VY+G   N +     VAVK      +   +E+F +E  ++  L H ++V+  
Sbjct: 16  LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 538 XXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLR 597
                           P   L  +L     +N L   T V     I + + YL     + 
Sbjct: 76  GIIEEEPTWIIMELY-PYGELGHYL--ERNKNSLKVLTLVLYSLQICKAMAYLES---IN 129
Query: 598 VIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFS 657
            +HRD+   NIL+      K+ DFG++R +  DE   K         +MSPE      F+
Sbjct: 130 CVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPESINFRRFT 188
Query: 658 IKSDVFSFGVLLLETLSSKRNTDF--SNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEAS 715
             SDV+ F V + E LS  +   F   N + + +L       K DR   L  P L     
Sbjct: 189 TASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE------KGDR---LPKPDLCPPVL 239
Query: 716 YLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
           Y ++ R       C   D +DRP   E+V  L++
Sbjct: 240 YTLMTR-------CWDYDPSDRPRFTELVCSLSD 266

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 100/234 (42%), Gaps = 9/234 (3%)
Query: 463 PMFSLASVSAATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQ-EEFKN 520
           P      V      ++  + +GEG +G V      LN   VA++++S    Q   +    
Sbjct: 15  PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLR 74
Query: 521 EIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRII 580
           EIK++ + +H N++                  +    ++  L+   K   L        +
Sbjct: 75  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 134
Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK-TKRI 639
             I +GL Y+H  +   V+HRDLK SN+LL+   + KI DFG+AR+   D   +      
Sbjct: 135 YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 640 VGTYGYMSPEYAQQGLFSIKS-DVFSFGVLLLETLSSKRNTDFSNTNSLTLLGH 692
           V T  Y +PE         KS D++S G +L E LS++    F   + L  L H
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR--PIFPGKHYLDQLNH 243

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 11/198 (5%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
           LGEG +G V      +  + VAVK +  +      E  K EI +   L H N+V+     
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENL-LGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                            L    FD  + ++ +      R    +  G++YLH    + + 
Sbjct: 75  REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 127
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRD+K  N+LLD+  N KISDFG+A +F  +  +    ++ GT  Y++PE  ++  F  +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 187
Query: 660 S-DVFSFGVLLLETLSSK 676
             DV+S G++L   L+ +
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 93/220 (42%), Gaps = 39/220 (17%)
Query: 483 LGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR------ 535
           +G GGFG V+K +  ++G+   ++R+   +    E+ + E+K +AKL H N+V       
Sbjct: 20  IGSGGFGQVFKAKHRIDGKTYVIRRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWD 75
Query: 536 -----------XXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVR------ 578
                                          K L   +    K  L  W  + R      
Sbjct: 76  GFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDK 135
Query: 579 -----IIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ 633
                + E I +G+ Y+H     ++IHRDLK SNI L      KI DFG+      D  +
Sbjct: 136 VLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR 192
Query: 634 SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETL 673
           +++K   GT  YMSPE      +  + D+++ G++L E L
Sbjct: 193 TRSK---GTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 11/198 (5%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
           LGEG +G V      +  + VAVK +  +      E  K EI +   L H N+V+     
Sbjct: 13  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENL-LGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                            L    FD  + ++ +      R    +  G++YLH    + + 
Sbjct: 73  REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 125
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRD+K  N+LLD+  N KISDFG+A +F  +  +    ++ GT  Y++PE  ++  F  +
Sbjct: 126 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 185
Query: 660 S-DVFSFGVLLLETLSSK 676
             DV+S G++L   L+ +
Sbjct: 186 PVDVWSCGIVLTAMLAGE 203

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 11/198 (5%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
           LGEG +G V      +  + VAVK +  +      E  K EI +   L H N+V+     
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENL-LGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                            L    FD  + ++ +      R    +  G++YLH    + + 
Sbjct: 74  REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRD+K  N+LLD+  N KISDFG+A +F  +  +    ++ GT  Y++PE  ++  F  +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 660 S-DVFSFGVLLLETLSSK 676
             DV+S G++L   L+ +
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 11/198 (5%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
           LGEG +G V      +  + VAVK +  +      E  K EI +   L H N+V+     
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENL-LGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                            L    FD  + ++ +      R    +  G++YLH    + + 
Sbjct: 75  REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 127
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRD+K  N+LLD+  N KISDFG+A +F  +  +    ++ GT  Y++PE  ++  F  +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 660 S-DVFSFGVLLLETLSSK 676
             DV+S G++L   L+ +
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 11/198 (5%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
           LGEG +G V      +  + VAVK +  +      E  K EI +   L H N+V+     
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENL-LGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                            L    FD  + ++ +      R    +  G++YLH    + + 
Sbjct: 74  REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRD+K  N+LLD+  N KISDFG+A +F  +  +    ++ GT  Y++PE  ++  F  +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 660 S-DVFSFGVLLLETLSSK 676
             DV+S G++L   L+ +
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 113/274 (41%), Gaps = 30/274 (10%)
Query: 483 LGEGGFGPVYKGRLLNGQ----EVAVKRLSSQ-SGQGQEEFKNEIKLIAKLQHRNLVRXX 537
           LGEG FG VY+G   N +     VAVK      +   +E+F +E  ++  L H ++V+  
Sbjct: 20  LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 538 XXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLR 597
                           P   L  +L     +N L   T V     I + + YL     + 
Sbjct: 80  GIIEEEPTWIIMELY-PYGELGHYL--ERNKNSLKVLTLVLYSLQICKAMAYLES---IN 133
Query: 598 VIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFS 657
            +HRD+   NIL+      K+ DFG++R +  DE   K         +MSPE      F+
Sbjct: 134 CVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPESINFRRFT 192
Query: 658 IKSDVFSFGVLLLETLSSKRNTDF--SNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEAS 715
             SDV+ F V + E LS  +   F   N + + +L       K DR   L  P L     
Sbjct: 193 TASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE------KGDR---LPKPDLCPPVL 243
Query: 716 YLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
           Y ++ R       C   D +DRP   E+V  L++
Sbjct: 244 YTLMTR-------CWDYDPSDRPRFTELVCSLSD 270

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 119/279 (42%), Gaps = 29/279 (10%)
Query: 475 ANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSS---QSGQGQEEFKNEIKLIAKLQH 530
            N+     +G+G F  V   R +L G+EVAV+ +      S   Q+ F+ E++++  L H
Sbjct: 14  GNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNH 72
Query: 531 RNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYL 590
            N+V+                      +  +L    +        + R I    Q   Y 
Sbjct: 73  PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ---YC 129
Query: 591 HQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEY 650
           HQ     ++HRDLKA N+LLD DMN KI+DFG +  F      +K     G+  Y +PE 
Sbjct: 130 HQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF---TFGNKLDEFCGSPPYAAPEL 183
Query: 651 AQQGLF-SIKSDVFSFGVLLLETLSSKRNTDFSNTNSL---TLLGH-------AWDLWKD 699
            Q   +   + DV+S GV+L   +S     D  N   L    L G        + D    
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENL 243
Query: 700 DRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRP 738
            + + +++P+ +     ++ +R++NVG     ED   +P
Sbjct: 244 LKKFLILNPSKRGTLEQIMKDRWMNVG----HEDDELKP 278

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 122/283 (43%), Gaps = 37/283 (13%)
Query: 475 ANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSS---QSGQGQEEFKNEIKLIAKLQH 530
            N+     +G+G F  V   R +L G+EVAVK +      S   Q+ F+ E++++  L H
Sbjct: 7   GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNH 65
Query: 531 RNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGW----GTRVRIIEGIAQG 586
            N+V+                      +    FD    +  GW      R +  + I   
Sbjct: 66  PNIVKLFEVIETEKTLYLVMEYASGGEV----FDYLVAH--GWMKEKEARAKFRQ-IVSA 118
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           + Y HQ     ++HRDLKA N+LLD DMN KI+DFG +  F      +K     G+  Y 
Sbjct: 119 VQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF---TFGNKLDTFCGSPPYA 172
Query: 647 SPEYAQQGLF-SIKSDVFSFGVLLLETLSSKRNTDFSNTNSL---TLLGH-------AWD 695
           +PE  Q   +   + DV+S GV+L   +S     D  N   L    L G        + D
Sbjct: 173 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTD 232
Query: 696 LWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRP 738
                + + +++P+ +     ++ +R++NVG     ED   +P
Sbjct: 233 CENLLKKFLILNPSKRGTLEQIMKDRWMNVG----HEDDELKP 271

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 11/198 (5%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
           LGEG +G V      +  + VAVK +  +      E  K EI +   L H N+V+     
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENL-LGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                            L    FD  + ++ +      R    +  G++YLH    + + 
Sbjct: 74  REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRD+K  N+LLD+  N KISDFG+A +F  +  +    ++ GT  Y++PE  ++  F  +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 660 S-DVFSFGVLLLETLSSK 676
             DV+S G++L   L+ +
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 113/272 (41%), Gaps = 26/272 (9%)
Query: 483 LGEGGFGPVYKGRLLNGQ----EVAVKRLSSQ-SGQGQEEFKNEIKLIAKLQHRNLVRXX 537
           LGEG FG VY+G   N +     VAVK      +   +E+F +E  ++  L H ++V+  
Sbjct: 32  LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 538 XXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLR 597
                           P   L  +L     +N L   T V     I + + YL     + 
Sbjct: 92  GIIEEEPTWIIMELY-PYGELGHYL--ERNKNSLKVLTLVLYSLQICKAMAYLES---IN 145
Query: 598 VIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFS 657
            +HRD+   NIL+      K+ DFG++R +  DE   K         +MSPE      F+
Sbjct: 146 CVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPESINFRRFT 204
Query: 658 IKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYL 717
             SDV+ F V + E LS  +   F   N   ++G    L K DR   L  P L     Y 
Sbjct: 205 TASDVWMFAVCMWEILSFGKQPFFWLENK-DVIGV---LEKGDR---LPKPDLCPPVLYT 257
Query: 718 ILNRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
           ++ R       C   D +DRP   E+V  L++
Sbjct: 258 LMTR-------CWDYDPSDRPRFTELVCSLSD 282

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 100/234 (42%), Gaps = 9/234 (3%)
Query: 463 PMFSLASVSAATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQ-EEFKN 520
           P      V      ++  + +GEG +G V      +N   VA+K++S    Q   +    
Sbjct: 11  PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR 70
Query: 521 EIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRII 580
           EIK++ + +H N++                  +    ++  L+   K   L        +
Sbjct: 71  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 130
Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK-TKRI 639
             I +GL Y+H  +   V+HRDLK SN+LL+   + KI DFG+AR+   D   +      
Sbjct: 131 YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 187
Query: 640 VGTYGYMSPEYAQQGLFSIKS-DVFSFGVLLLETLSSKRNTDFSNTNSLTLLGH 692
           V T  Y +PE         KS D++S G +L E LS++    F   + L  L H
Sbjct: 188 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR--PIFPGKHYLDQLNH 239

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 11/198 (5%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
           LGEG +G V      +  + VAVK +  +      E  K EI +   L H N+V+     
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENL-LGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                            L    FD  + ++ +      R    +  G++YLH    + + 
Sbjct: 74  REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRD+K  N+LLD+  N KISDFG+A +F  +  +    ++ GT  Y++PE  ++  F  +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 660 S-DVFSFGVLLLETLSSK 676
             DV+S G++L   L+ +
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 100/234 (42%), Gaps = 9/234 (3%)
Query: 463 PMFSLASVSAATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQ-EEFKN 520
           P      V      ++  + +GEG +G V      +N   VA+K++S    Q   +    
Sbjct: 13  PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR 72
Query: 521 EIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRII 580
           EIK++ + +H N++                  +    ++  L+   K   L        +
Sbjct: 73  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 132
Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK-TKRI 639
             I +GL Y+H  +   V+HRDLK SN+LL+   + KI DFG+AR+   D   +      
Sbjct: 133 YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 189
Query: 640 VGTYGYMSPEYAQQGLFSIKS-DVFSFGVLLLETLSSKRNTDFSNTNSLTLLGH 692
           V T  Y +PE         KS D++S G +L E LS++    F   + L  L H
Sbjct: 190 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR--PIFPGKHYLDQLNH 241

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 11/198 (5%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
           LGEG +G V      +  + VAVK +  +      E  K EI +   L H N+V+     
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENL-LGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                            L    FD  + ++ +      R    +  G++YLH    + + 
Sbjct: 75  REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 127
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRD+K  N+LLD+  N KISDFG+A +F  +  +    ++ GT  Y++PE  ++  F  +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 660 S-DVFSFGVLLLETLSSK 676
             DV+S G++L   L+ +
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 100/234 (42%), Gaps = 9/234 (3%)
Query: 463 PMFSLASVSAATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQ-EEFKN 520
           P      V      ++  + +GEG +G V      +N   VA+K++S    Q   +    
Sbjct: 11  PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR 70
Query: 521 EIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRII 580
           EIK++ + +H N++                  +    ++  L+   K   L        +
Sbjct: 71  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 130
Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK-TKRI 639
             I +GL Y+H  +   V+HRDLK SN+LL+   + KI DFG+AR+   D   +      
Sbjct: 131 YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 187
Query: 640 VGTYGYMSPEYAQQGLFSIKS-DVFSFGVLLLETLSSKRNTDFSNTNSLTLLGH 692
           V T  Y +PE         KS D++S G +L E LS++    F   + L  L H
Sbjct: 188 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR--PIFPGKHYLDQLNH 239

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 120/285 (42%), Gaps = 46/285 (16%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQE-----VAVKRL-SSQSGQGQEEFKNEIKLIAKLQ 529
            F     L  G FG VYKG  +   E     VA+K L  + S +  +E  +E  ++A + 
Sbjct: 23  EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKEN--------LLGWGTRVRIIE 581
           + ++ R                 MP   L     D  +E+        LL W  +     
Sbjct: 83  NPHVCRLLGICLTSTVQLIMQL-MPFGCL----LDYVREHKDNIGSQYLLNWCVQ----- 132
Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            IA+G+ YL      R++HRDL A N+L+    + KI+DFG+A++ G +E +   +    
Sbjct: 133 -IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 188
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKD 699
              +M+ E     +++ +SDV+S+GV + E  T  SK       +   ++L         
Sbjct: 189 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL--------- 239
Query: 700 DRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVV 744
           ++   L  P +     Y+I+ +       C   DA  RP   E++
Sbjct: 240 EKGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFRELI 277

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 120/285 (42%), Gaps = 46/285 (16%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQE-----VAVKRL-SSQSGQGQEEFKNEIKLIAKLQ 529
            F     L  G FG VYKG  +   E     VA+K L  + S +  +E  +E  ++A + 
Sbjct: 16  EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKEN--------LLGWGTRVRIIE 581
           + ++ R                 MP   L     D  +E+        LL W  +     
Sbjct: 76  NPHVCRLLGICLTSTVQLITQL-MPFGCL----LDYVREHKDNIGSQYLLNWCVQ----- 125
Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            IA+G+ YL      R++HRDL A N+L+    + KI+DFG+A++ G +E +   +    
Sbjct: 126 -IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKD 699
              +M+ E     +++ +SDV+S+GV + E  T  SK       +   ++L         
Sbjct: 182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL--------- 232
Query: 700 DRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVV 744
           ++   L  P +     Y+I+ +       C   DA  RP   E++
Sbjct: 233 EKGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFRELI 270

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 11/198 (5%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
           LGEG +G V      +  + VAVK +  +      E  K EI +   L H N+V+     
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENL-LGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                            L    FD  + ++ +      R    +  G++YLH    + + 
Sbjct: 74  REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRD+K  N+LLD+  N KISDFG+A +F  +  +    ++ GT  Y++PE  ++  F  +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 660 S-DVFSFGVLLLETLSSK 676
             DV+S G++L   L+ +
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 95/218 (43%), Gaps = 7/218 (3%)
Query: 463 PMFSLASVSAATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQ-EEFKN 520
           P      V      ++  + +GEG +G V      +N   VA+K++S    Q   +    
Sbjct: 19  PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR 78
Query: 521 EIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRII 580
           EIK++ + +H N++                  +    ++  L+   K   L        +
Sbjct: 79  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 138
Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK-TKRI 639
             I +GL Y+H  +   V+HRDLK SN+LL+   + KI DFG+AR+   D   +      
Sbjct: 139 YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 195
Query: 640 VGTYGYMSPEYAQQGLFSIKS-DVFSFGVLLLETLSSK 676
           V T  Y +PE         KS D++S G +L E LS++
Sbjct: 196 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 95/218 (43%), Gaps = 7/218 (3%)
Query: 463 PMFSLASVSAATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQ-EEFKN 520
           P      V      ++  + +GEG +G V      +N   VA+K++S    Q   +    
Sbjct: 11  PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR 70
Query: 521 EIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRII 580
           EIK++ + +H N++                  +    ++  L+   K   L        +
Sbjct: 71  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 130
Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK-TKRI 639
             I +GL Y+H  +   V+HRDLK SN+LL+   + KI DFG+AR+   D   +      
Sbjct: 131 YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 187
Query: 640 VGTYGYMSPEYAQQGLFSIKS-DVFSFGVLLLETLSSK 676
           V T  Y +PE         KS D++S G +L E LS++
Sbjct: 188 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225

>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 120/285 (42%), Gaps = 46/285 (16%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQE-----VAVKRL-SSQSGQGQEEFKNEIKLIAKLQ 529
            F     L  G FG VYKG  +   E     VA+K L  + S +  +E  +E  ++A + 
Sbjct: 23  EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKEN--------LLGWGTRVRIIE 581
           + ++ R                 MP   L     D  +E+        LL W  +     
Sbjct: 83  NPHVCRLLGICLTSTVQLITQL-MPFGCL----LDYVREHKDNIGSQYLLNWCVQ----- 132
Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            IA+G+ YL      R++HRDL A N+L+    + KI+DFG+A++ G +E +   +    
Sbjct: 133 -IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 188
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKD 699
              +M+ E     +++ +SDV+S+GV + E  T  SK       +   ++L         
Sbjct: 189 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL--------- 239
Query: 700 DRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVV 744
           ++   L  P +     Y+I+ +       C   DA  RP   E++
Sbjct: 240 EKGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFRELI 277

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 11/198 (5%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
           LGEG +G V      +  + VAVK +  +      E  K EI +   L H N+V+     
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENL-LGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                            L    FD  + ++ +      R    +  G++YLH    + + 
Sbjct: 74  REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRD+K  N+LLD+  N KISDFG+A +F  +  +    ++ GT  Y++PE  ++  F  +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 660 S-DVFSFGVLLLETLSSK 676
             DV+S G++L   L+ +
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 122/280 (43%), Gaps = 31/280 (11%)
Query: 475 ANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSS---QSGQGQEEFKNEIKLIAKLQH 530
            N+     +G+G F  V   R +L G+EVAV+ +      S   Q+ F+ E++++  L H
Sbjct: 14  GNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNH 72
Query: 531 RNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYL 590
            N+V+                      +  +L    +        + R I    Q   Y 
Sbjct: 73  PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ---YC 129
Query: 591 HQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG-GDELQSKTKRIVGTYGYMSPE 649
           HQ     ++HRDLKA N+LLD DMN KI+DFG +  F  G++L +      G+  Y +PE
Sbjct: 130 HQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT----FCGSPPYAAPE 182
Query: 650 YAQQGLF-SIKSDVFSFGVLLLETLSSKRNTDFSNTNSL---TLLGH-------AWDLWK 698
             Q   +   + DV+S GV+L   +S     D  N   L    L G        + D   
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCEN 242
Query: 699 DDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRP 738
             + + +++P+ +     ++ +R++NVG     ED   +P
Sbjct: 243 LLKKFLILNPSKRGTLEQIMKDRWMNVG----HEDDELKP 278

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFK---NEIKLIAKLQHR 531
           +F     LGEG F  V   R L   +E A+K L  +    + +      E  ++++L H 
Sbjct: 8   DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 67
Query: 532 NLVRXXXXXXXXXXXXXXXXXMPNKSLDFFL-----FDSTKENLLGWGTRVRIIEGIAQG 586
             V+                   N  L  ++     FD T        TR    E I   
Sbjct: 68  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSA 119
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L YLH      +IHRDLK  NILL++DM+ +I+DFG A++   +  Q++    VGT  Y+
Sbjct: 120 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 176
Query: 647 SPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           SPE   +      SD+++ G ++ + ++
Sbjct: 177 SPELLTEKSACKSSDLWALGCIIYQLVA 204

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 11/198 (5%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
           LGEG +G V      +  + VAVK +  +      E  K EI +   L H N+V+     
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENL-LGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                            L    FD  + ++ +      R    +  G++YLH    + + 
Sbjct: 75  REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 127
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRD+K  N+LLD+  N KISDFG+A +F  +  +    ++ GT  Y++PE  ++  F  +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 660 S-DVFSFGVLLLETLSSK 676
             DV+S G++L   L+ +
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 11/198 (5%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
           LGEG +G V      +  + VAVK +  +      E  K EI +   L H N+V+     
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENL-LGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                            L    FD  + ++ +      R    +  G++YLH    + + 
Sbjct: 75  REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 127
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRD+K  N+LLD+  N KISDFG+A +F  +  +    ++ GT  Y++PE  ++  F  +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 660 S-DVFSFGVLLLETLSSK 676
             DV+S G++L   L+ +
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 100/234 (42%), Gaps = 9/234 (3%)
Query: 463 PMFSLASVSAATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQ-EEFKN 520
           P      V      ++  + +GEG +G V      +N   VA+K++S    Q   +    
Sbjct: 31  PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR 90
Query: 521 EIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRII 580
           EIK++ + +H N++                  +    ++  L+   K   L        +
Sbjct: 91  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 150
Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK-TKRI 639
             I +GL Y+H  +   V+HRDLK SN+LL+   + KI DFG+AR+   D   +      
Sbjct: 151 YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 207
Query: 640 VGTYGYMSPEYAQQGLFSIKS-DVFSFGVLLLETLSSKRNTDFSNTNSLTLLGH 692
           V T  Y +PE         KS D++S G +L E LS++    F   + L  L H
Sbjct: 208 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR--PIFPGKHYLDQLNH 259

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 11/198 (5%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
           LGEG +G V      +  + VAVK +  +      E  K EI +   L H N+V+     
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENL-LGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                            L    FD  + ++ +      R    +  G++YLH    + + 
Sbjct: 75  REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 127
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRD+K  N+LLD+  N KISDFG+A +F  +  +    ++ GT  Y++PE  ++  F  +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 660 S-DVFSFGVLLLETLSSK 676
             DV+S G++L   L+ +
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 105/219 (47%), Gaps = 31/219 (14%)
Query: 470 VSAATANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRL------SSQSGQGQEEFKNEI 522
           V +    +   + LGEG F  VYK R  N  Q VA+K++       ++ G  +   + EI
Sbjct: 5   VKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALR-EI 63
Query: 523 KLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEG 582
           KL+ +L H N++                    N SL F   ++  E ++   + V     
Sbjct: 64  KLLQELSHPNIIGLLDAFGHKS----------NISLVFDFMETDLEVIIKDNSLVLTPSH 113
Query: 583 IA-------QGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK 635
           I        QGL YLHQ+    ++HRDLK +N+LLD++   K++DFG+A+ FG    ++ 
Sbjct: 114 IKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN-RAY 169
Query: 636 TKRIVGTYGYMSPEYAQQG-LFSIKSDVFSFGVLLLETL 673
             ++V T  Y +PE      ++ +  D+++ G +L E L
Sbjct: 170 XHQVV-TRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFK---NEIKLIAKLQHR 531
           +F     LGEG F  V   R L   +E A+K L  +    + +      E  ++++L H 
Sbjct: 11  DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 70
Query: 532 NLVRXXXXXXXXXXXXXXXXXMPNKSLDFFL-----FDSTKENLLGWGTRVRIIEGIAQG 586
             V+                   N  L  ++     FD T        TR    E I   
Sbjct: 71  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSA 122
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L YLH      +IHRDLK  NILL++DM+ +I+DFG A++   +  Q++    VGT  Y+
Sbjct: 123 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 179
Query: 647 SPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           SPE   +      SD+++ G ++ + ++
Sbjct: 180 SPELLTEKSACKSSDLWALGCIIYQLVA 207

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 138/303 (45%), Gaps = 52/303 (17%)
Query: 466 SLASVSAATANFSTEN-------KLGEGGFGPVYKGR-LLNGQEVAVKRL-SSQSGQGQE 516
           S A +S    NF  +        +LG G +G V K R + +GQ +AVKR+ ++ + Q Q+
Sbjct: 35  SKACISIGNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQK 94
Query: 517 EFKNEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFF---LFD---STKENL 570
               ++ +  +                         + + SLD F   + D   +  E++
Sbjct: 95  RLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDI 154
Query: 571 LGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD 630
           LG     +I   I + L +LH  S+L VIHRD+K SN+L++     K+ DFG++    G 
Sbjct: 155 LG-----KIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGIS----GY 203
Query: 631 ELQSKTKRI-VGTYGYMSPEYAQQGL----FSIKSDVFSFGVLLLETLSSKRNTDFSNTN 685
            + S  K I  G   YM+PE     L    +S+KSD++S G+ ++E              
Sbjct: 204 LVDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIE-------------- 249
Query: 686 SLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNR----YINVGLLCVQEDAADRPTMF 741
            L +L   +D W     ++ +   ++  +  L  ++    +++    C+++++ +RPT  
Sbjct: 250 -LAILRFPYDSW--GTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYP 306
Query: 742 EVV 744
           E++
Sbjct: 307 ELM 309

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEF---KNEIKLIAKLQHR 531
           +F     LGEG F  V   R L   +E A+K L  +    + +      E  ++++L H 
Sbjct: 15  DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 74
Query: 532 NLVRXXXXXXXXXXXXXXXXXMPNKSLDFFL-----FDSTKENLLGWGTRVRIIEGIAQG 586
             V+                   N  L  ++     FD T        TR    E I   
Sbjct: 75  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSA 126
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L YLH      +IHRDLK  NILL++DM+ +I+DFG A++   +  Q++    VGT  Y+
Sbjct: 127 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 183
Query: 647 SPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           SPE   +      SD+++ G ++ + ++
Sbjct: 184 SPELLTEKSACKSSDLWALGCIIYQLVA 211

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFK---NEIKLIAKLQHR 531
           +F     LGEG F  V   R L   +E A+K L  +    + +      E  ++++L H 
Sbjct: 10  DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 69
Query: 532 NLVRXXXXXXXXXXXXXXXXXMPNKSLDFFL-----FDSTKENLLGWGTRVRIIEGIAQG 586
             V+                   N  L  ++     FD T        TR    E I   
Sbjct: 70  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSA 121
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L YLH      +IHRDLK  NILL++DM+ +I+DFG A++   +  Q++    VGT  Y+
Sbjct: 122 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 178
Query: 647 SPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           SPE   +      SD+++ G ++ + ++
Sbjct: 179 SPELLTEKSACKSSDLWALGCIIYQLVA 206

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEF---KNEIKLIAKLQHR 531
           +F     LGEG F  V   R L   +E A+K L  +    + +      E  ++++L H 
Sbjct: 33  DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 532 NLVRXXXXXXXXXXXXXXXXXMPNKSLDFFL-----FDSTKENLLGWGTRVRIIEGIAQG 586
             V+                   N  L  ++     FD T        TR    E I   
Sbjct: 93  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSA 144
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L YLH      +IHRDLK  NILL++DM+ +I+DFG A++   +  Q++    VGT  Y+
Sbjct: 145 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 647 SPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           SPE   +      SD+++ G ++ + ++
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVA 229

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEF---KNEIKLIAKLQHR 531
           +F     LGEG F  V   R L   +E A+K L  +    + +      E  ++++L H 
Sbjct: 31  DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 532 NLVRXXXXXXXXXXXXXXXXXMPNKSLDFFL-----FDSTKENLLGWGTRVRIIEGIAQG 586
             V+                   N  L  ++     FD T        TR    E I   
Sbjct: 91  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSA 142
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L YLH      +IHRDLK  NILL++DM+ +I+DFG A++   +  Q++    VGT  Y+
Sbjct: 143 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 199
Query: 647 SPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           SPE   +      SD+++ G ++ + ++
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVA 227

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEF---KNEIKLIAKLQHR 531
           +F     LGEG F  V   R L   +E A+K L  +    + +      E  ++++L H 
Sbjct: 31  DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 532 NLVRXXXXXXXXXXXXXXXXXMPNKSLDFFL-----FDSTKENLLGWGTRVRIIEGIAQG 586
             V+                   N  L  ++     FD T        TR    E I   
Sbjct: 91  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSA 142
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L YLH      +IHRDLK  NILL++DM+ +I+DFG A++   +  Q++    VGT  Y+
Sbjct: 143 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 199
Query: 647 SPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           SPE   +      SD+++ G ++ + ++
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVA 227

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 120/285 (42%), Gaps = 46/285 (16%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQE-----VAVKRL-SSQSGQGQEEFKNEIKLIAKLQ 529
            F     LG G FG VYKG  +   E     VA+  L  + S +  +E  +E  ++A + 
Sbjct: 50  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKEN--------LLGWGTRVRIIE 581
           + ++ R                 MP   L     D  +E+        LL W  +     
Sbjct: 110 NPHVCRLLGICLTSTVQLITQL-MPFGCL----LDYVREHKDNIGSQYLLNWCVQ----- 159
Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            IA+G+ YL      R++HRDL A N+L+    + KI+DFG+A++ G +E +   +    
Sbjct: 160 -IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 215
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLTLLGHAWDLWKD 699
              +M+ E     +++ +SDV+S+GV + E  T  SK       +   ++L         
Sbjct: 216 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL--------- 266
Query: 700 DRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVV 744
           ++   L  P +     Y+I+ +       C   DA  RP   E++
Sbjct: 267 EKGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFRELI 304

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFK---NEIKLIAKLQHR 531
           +F     LGEG F  V   R L   +E A+K L  +    + +      E  ++++L H 
Sbjct: 9   DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 68
Query: 532 NLVRXXXXXXXXXXXXXXXXXMPNKSLDFFL-----FDSTKENLLGWGTRVRIIEGIAQG 586
             V+                   N  L  ++     FD T        TR    E I   
Sbjct: 69  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSA 120
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L YLH      +IHRDLK  NILL++DM+ +I+DFG A++   +  Q++    VGT  Y+
Sbjct: 121 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 177
Query: 647 SPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           SPE   +      SD+++ G ++ + ++
Sbjct: 178 SPELLTEKSACKSSDLWALGCIIYQLVA 205

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 95/218 (43%), Gaps = 7/218 (3%)
Query: 463 PMFSLASVSAATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQ-EEFKN 520
           P      V      ++  + +GEG +G V      +N   VA+K++S    Q   +    
Sbjct: 11  PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR 70
Query: 521 EIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRII 580
           EIK++ + +H N++                  +    ++  L+   K   L        +
Sbjct: 71  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 130
Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK-TKRI 639
             I +GL Y+H  +   V+HRDLK SN+LL+   + KI DFG+AR+   D   +      
Sbjct: 131 YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 187
Query: 640 VGTYGYMSPEYAQQGLFSIKS-DVFSFGVLLLETLSSK 676
           V T  Y +PE         KS D++S G +L E LS++
Sbjct: 188 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEF---KNEIKLIAKLQHR 531
           +F     LGEG F  V   R L   +E A+K L  +    + +      E  ++++L H 
Sbjct: 31  DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 532 NLVRXXXXXXXXXXXXXXXXXMPNKSLDFFL-----FDSTKENLLGWGTRVRIIEGIAQG 586
             V+                   N  L  ++     FD T        TR    E I   
Sbjct: 91  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSA 142
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L YLH      +IHRDLK  NILL++DM+ +I+DFG A++   +  Q++    VGT  Y+
Sbjct: 143 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYV 199
Query: 647 SPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           SPE   +      SD+++ G ++ + ++
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVA 227

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 102/238 (42%), Gaps = 20/238 (8%)
Query: 471 SAATANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEF-----KNEIKL 524
           S AT+ +    ++G G +G VYK R   +G  VA+K +   +G G           E+ L
Sbjct: 5   SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL 64
Query: 525 IAKLQ---HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFL---FDSTKENLLGWGTRVR 578
           + +L+   H N+VR                 +  + +D  L    D      L   T   
Sbjct: 65  LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKD 124
Query: 579 IIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKR 638
           ++    +GL +LH      ++HRDLK  NIL+      K++DFG+ARI+     Q     
Sbjct: 125 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALTP 178
Query: 639 IVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDL 696
           +V T  Y +PE   Q  ++   D++S G +  E    +R   F   +    LG  +DL
Sbjct: 179 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF--RRKPLFCGNSEADQLGKIFDL 234

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 11/198 (5%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
           LGEG +G V      +  + VAVK +  +      E  K EI +   L H N+V+     
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENL-LGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                            L    FD  + ++ +      R    +  G++YLH    + + 
Sbjct: 74  REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRD+K  N+LLD+  N KISDFG+A +F  +  +    ++ GT  Y++PE  ++  F  +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 660 S-DVFSFGVLLLETLSSK 676
             DV+S G++L   L+ +
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEF---KNEIKLIAKLQHR 531
           +F     LGEG F  V   R L   +E A+K L  +    + +      E  ++++L H 
Sbjct: 30  DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 532 NLVRXXXXXXXXXXXXXXXXXMPNKSLDFFL-----FDSTKENLLGWGTRVRIIEGIAQG 586
             V+                   N  L  ++     FD T        TR    E I   
Sbjct: 90  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSA 141
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L YLH      +IHRDLK  NILL++DM+ +I+DFG A++   +  Q++    VGT  Y+
Sbjct: 142 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV 198
Query: 647 SPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           SPE   +      SD+++ G ++ + ++
Sbjct: 199 SPELLTEKSACKSSDLWALGCIIYQLVA 226

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFK---NEIKLIAKLQHR 531
           +F     LGEG F  V   R L   +E A+K L  +    + +      E  ++++L H 
Sbjct: 33  DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 532 NLVRXXXXXXXXXXXXXXXXXMPNKSLDFFL-----FDSTKENLLGWGTRVRIIEGIAQG 586
             V+                   N  L  ++     FD T        TR    E I   
Sbjct: 93  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSA 144
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L YLH      +IHRDLK  NILL++DM+ +I+DFG A++   +  Q++    VGT  Y+
Sbjct: 145 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 647 SPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           SPE   +      SD+++ G ++ + ++
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVA 229

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFK---NEIKLIAKLQHR 531
           +F     LGEG F  V   R L   +E A+K L  +    + +      E  ++++L H 
Sbjct: 34  DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 532 NLVRXXXXXXXXXXXXXXXXXMPNKSLDFFL-----FDSTKENLLGWGTRVRIIEGIAQG 586
             V+                   N  L  ++     FD T        TR    E I   
Sbjct: 94  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSA 145
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L YLH      +IHRDLK  NILL++DM+ +I+DFG A++   +  Q++    VGT  Y+
Sbjct: 146 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 202
Query: 647 SPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           SPE   +      SD+++ G ++ + ++
Sbjct: 203 SPELLTEKSACKSSDLWALGCIIYQLVA 230

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFK---NEIKLIAKLQHR 531
           +F     LGEG F  V   R L   +E A+K L  +    + +      E  ++++L H 
Sbjct: 34  DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 532 NLVRXXXXXXXXXXXXXXXXXMPNKSLDFFL-----FDSTKENLLGWGTRVRIIEGIAQG 586
             V+                   N  L  ++     FD T        TR    E I   
Sbjct: 94  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSA 145
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L YLH      +IHRDLK  NILL++DM+ +I+DFG A++   +  Q++    VGT  Y+
Sbjct: 146 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV 202
Query: 647 SPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           SPE   +      SD+++ G ++ + ++
Sbjct: 203 SPELLTEKSACKSSDLWALGCIIYQLVA 230

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 95/218 (43%), Gaps = 7/218 (3%)
Query: 463 PMFSLASVSAATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQ-EEFKN 520
           P      V      ++  + +GEG +G V      +N   VA+K++S    Q   +    
Sbjct: 11  PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR 70
Query: 521 EIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRII 580
           EIK++ + +H N++                  +    ++  L+   K   L        +
Sbjct: 71  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 130
Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK-TKRI 639
             I +GL Y+H  +   V+HRDLK SN+LL+   + KI DFG+AR+   D   +      
Sbjct: 131 YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEY 187
Query: 640 VGTYGYMSPEYAQQGLFSIKS-DVFSFGVLLLETLSSK 676
           V T  Y +PE         KS D++S G +L E LS++
Sbjct: 188 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEF---KNEIKLIAKLQHR 531
           +F     LGEG F  V   R L   +E A+K L  +    + +      E  ++++L H 
Sbjct: 30  DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 532 NLVRXXXXXXXXXXXXXXXXXMPNKSLDFFL-----FDSTKENLLGWGTRVRIIEGIAQG 586
             V+                   N  L  ++     FD T        TR    E I   
Sbjct: 90  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSA 141
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L YLH      +IHRDLK  NILL++DM+ +I+DFG A++   +  Q++    VGT  Y+
Sbjct: 142 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 198
Query: 647 SPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           SPE   +      SD+++ G ++ + ++
Sbjct: 199 SPELLTEKSACKSSDLWALGCIIYQLVA 226

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFK---NEIKLIAKLQHR 531
           +F     LGEG F  V   R L   +E A+K L  +    + +      E  ++++L H 
Sbjct: 36  DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 95
Query: 532 NLVRXXXXXXXXXXXXXXXXXMPNKSLDFFL-----FDSTKENLLGWGTRVRIIEGIAQG 586
             V+                   N  L  ++     FD T        TR    E I   
Sbjct: 96  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSA 147
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L YLH      +IHRDLK  NILL++DM+ +I+DFG A++   +  Q++    VGT  Y+
Sbjct: 148 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 204
Query: 647 SPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           SPE   +      SD+++ G ++ + ++
Sbjct: 205 SPELLTEKSACKSSDLWALGCIIYQLVA 232

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEF---KNEIKLIAKLQHR 531
           +F     LGEG F  V   R L   +E A+K L  +    + +      E  ++++L H 
Sbjct: 33  DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 532 NLVRXXXXXXXXXXXXXXXXXMPNKSLDFFL-----FDSTKENLLGWGTRVRIIEGIAQG 586
             V+                   N  L  ++     FD T        TR    E I   
Sbjct: 93  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSA 144
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L YLH      +IHRDLK  NILL++DM+ +I+DFG A++   +  Q++    VGT  Y+
Sbjct: 145 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 647 SPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           SPE   +      SD+++ G ++ + ++
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVA 229

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEF---KNEIKLIAKLQHR 531
           +F     LGEG F  V   R L   +E A+K L  +    + +      E  ++++L H 
Sbjct: 33  DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 532 NLVRXXXXXXXXXXXXXXXXXMPNKSLDFFL-----FDSTKENLLGWGTRVRIIEGIAQG 586
             V+                   N  L  ++     FD T        TR    E I   
Sbjct: 93  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSA 144
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L YLH      +IHRDLK  NILL++DM+ +I+DFG A++   +  Q++    VGT  Y+
Sbjct: 145 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 647 SPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           SPE   +      SD+++ G ++ + ++
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVA 229

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFK---NEIKLIAKLQHR 531
           +F     LGEG F  V   R L   +E A+K L  +    + +      E  ++++L H 
Sbjct: 38  DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 97
Query: 532 NLVRXXXXXXXXXXXXXXXXXMPNKSLDFFL-----FDSTKENLLGWGTRVRIIEGIAQG 586
             V+                   N  L  ++     FD T        TR    E I   
Sbjct: 98  FFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSA 149
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L YLH      +IHRDLK  NILL++DM+ +I+DFG A++   +  Q++    VGT  Y+
Sbjct: 150 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 206
Query: 647 SPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           SPE   +      SD+++ G ++ + ++
Sbjct: 207 SPELLTEKSACKSSDLWALGCIIYQLVA 234

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 99/234 (42%), Gaps = 9/234 (3%)
Query: 463 PMFSLASVSAATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQ-EEFKN 520
           P      V      ++  + +GEG +G V      +N   VA+K++S    Q   +    
Sbjct: 31  PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR 90
Query: 521 EIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRII 580
           EIK++ + +H N++                  +    +   L+   K   L        +
Sbjct: 91  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFL 150
Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK-TKRI 639
             I +GL Y+H  +   V+HRDLK SN+LL+   + KI DFG+AR+   D   +      
Sbjct: 151 YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 207
Query: 640 VGTYGYMSPEYAQQGLFSIKS-DVFSFGVLLLETLSSKRNTDFSNTNSLTLLGH 692
           V T  Y +PE         KS D++S G +L E LS++    F   + L  L H
Sbjct: 208 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR--PIFPGKHYLDQLNH 259

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEF---KNEIKLIAKLQHR 531
           +F     LGEG F  V   R L   +E A+K L  +    + +      E  ++++L H 
Sbjct: 33  DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 532 NLVRXXXXXXXXXXXXXXXXXMPNKSLDFFL-----FDSTKENLLGWGTRVRIIEGIAQG 586
             V+                   N  L  ++     FD T        TR    E I   
Sbjct: 93  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSA 144
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L YLH      +IHRDLK  NILL++DM+ +I+DFG A++   +  Q++    VGT  Y+
Sbjct: 145 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 647 SPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           SPE   +      SD+++ G ++ + ++
Sbjct: 202 SPELLTEKSAXKSSDLWALGCIIYQLVA 229

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 94/218 (43%), Gaps = 7/218 (3%)
Query: 463 PMFSLASVSAATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQ-EEFKN 520
           P      V      ++  + +GEG +G V      +N   VA+K++S    Q   +    
Sbjct: 13  PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR 72
Query: 521 EIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRII 580
           EIK++   +H N++                  +    ++  L+   K   L        +
Sbjct: 73  EIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 132
Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK-TKRI 639
             I +GL Y+H  +   V+HRDLK SN+LL+   + KI DFG+AR+   D   +      
Sbjct: 133 YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 189
Query: 640 VGTYGYMSPEYAQQGLFSIKS-DVFSFGVLLLETLSSK 676
           V T  Y +PE         KS D++S G +L E LS++
Sbjct: 190 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           I   L YLH      +IHRDLK  NILL++DM+ +I+DFG A++   +  Q++    VGT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             Y+SPE   +      SD+++ G ++ + ++
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVA 227

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 74/140 (52%), Gaps = 13/140 (9%)
Query: 553 MPNKSLDFFLFDSTK--ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILL 610
           M   SLD  L  + +  E +LG   +V I   + +GL YL +  + +++HRD+K SNIL+
Sbjct: 148 MDGGSLDQVLKKAGRIPEQILG---KVSI--AVIKGLTYLRE--KHKIMHRDVKPSNILV 200
Query: 611 DKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLL 670
           +     K+ DFG++    G  + S     VGT  YMSPE  Q   +S++SD++S G+ L+
Sbjct: 201 NSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 256
Query: 671 ETLSSKRNTDFSNTNSLTLL 690
           E    +      +   L L+
Sbjct: 257 EMAVGRYPIPPPDAKELELM 276

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 20/194 (10%)
Query: 483 LGEGGFGPVYKGRLLNGQE-VAVKRLSSQSGQGQE-EFKNEIKLIAKLQHRNLVRXXXXX 540
           LG G F  V        Q+ VA+K ++ ++ +G+E   +NEI ++ K++H N+V      
Sbjct: 26  LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTR---VRIIEGIAQGLLYLHQYSRLR 597
                       +    L    FD   E   G+ T     R+I  +   + YLH    L 
Sbjct: 86  ESGGHLYLIMQLVSGGEL----FDRIVEK--GFYTERDASRLIFQVLDAVKYLHD---LG 136
Query: 598 VIHRDLKASNIL---LDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG 654
           ++HRDLK  N+L   LD+D    ISDFG++++   ++  S      GT GY++PE   Q 
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQK 193
Query: 655 LFSIKSDVFSFGVL 668
            +S   D +S GV+
Sbjct: 194 PYSKAVDCWSIGVI 207

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 20/200 (10%)
Query: 477 FSTENKLGEGGFGPVYKGRLLNGQE-VAVKRLSSQSGQGQE-EFKNEIKLIAKLQHRNLV 534
           +   + LG G F  V        Q+ VA+K ++ ++ +G+E   +NEI ++ K++H N+V
Sbjct: 20  YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTR---VRIIEGIAQGLLYLH 591
                             +    L    FD   E   G+ T     R+I  +   + YLH
Sbjct: 80  ALDDIYESGGHLYLIMQLVSGGEL----FDRIVEK--GFYTERDASRLIFQVLDAVKYLH 133
Query: 592 QYSRLRVIHRDLKASNIL---LDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSP 648
               L ++HRDLK  N+L   LD+D    ISDFG++++   ++  S      GT GY++P
Sbjct: 134 D---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAP 187
Query: 649 EYAQQGLFSIKSDVFSFGVL 668
           E   Q  +S   D +S GV+
Sbjct: 188 EVLAQKPYSKAVDCWSIGVI 207

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 128/289 (44%), Gaps = 42/289 (14%)
Query: 476 NFSTEN-----KLGEGGFGPVYKG-RLLNGQEVAVKRL-SSQSGQGQEEFKNEIKLIAKL 528
           +F+ E+     ++G G +G V K     +GQ +AVKR+ S+   + Q++   ++ ++ + 
Sbjct: 18  DFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRS 77
Query: 529 QHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFF-------LFDSTKENLLGWGTRVRIIE 581
                +                  + + S D F       L D   E +LG     +I  
Sbjct: 78  SDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILG-----KITL 132
Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTK-RIV 640
              + L +L +   L++IHRD+K SNILLD+  N K+ DFG++    G  + S  K R  
Sbjct: 133 ATVKALNHLKE--NLKIIHRDIKPSNILLDRSGNIKLCDFGIS----GQLVDSIAKTRDA 186
Query: 641 GTYGYMSPE-----YAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWD 695
           G   YM+PE      ++QG + ++SDV+S G+ L E  + +    F      ++      
Sbjct: 187 GCRPYMAPERIDPSASRQG-YDVRSDVWSLGITLYELATGR----FPYPKWNSVFDQLTQ 241
Query: 696 LWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVV 744
           + K D       P L N         +IN   LC+ +D + RP   E++
Sbjct: 242 VVKGD------PPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELL 284

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 88/195 (45%), Gaps = 11/195 (5%)
Query: 483 LGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXXXX 542
           +G+G FG V  G    G +VAVK + + +    + F  E  ++ +L+H NLV+       
Sbjct: 20  IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 543 XXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRD 602
                        K        S   ++LG    ++    + + + YL   +    +HRD
Sbjct: 77  EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRD 133
Query: 603 LKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDV 662
           L A N+L+ +D   K+SDFG+ +     E  S          + +PE  ++  FS KSDV
Sbjct: 134 LAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREAAFSTKSDV 188
Query: 663 FSFGVLLLETLSSKR 677
           +SFG+LL E  S  R
Sbjct: 189 WSFGILLWEIYSFGR 203

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 91/198 (45%), Gaps = 17/198 (8%)
Query: 482 KLGEGGFGPVYKGRLLNGQE---VAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXX 538
           +LG+G FG VYK +  N +     A K + ++S +  E++  EI ++A   H N+V+   
Sbjct: 44  ELGDGAFGKVYKAQ--NKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 101
Query: 539 XXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRV 598
                             ++D  + +   E  L       + +     L YLH     ++
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLEL--ERPLTESQIQVVCKQTLDALNYLHDN---KI 156
Query: 599 IHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEY-----AQQ 653
           IHRDLKA NIL   D + K++DFG++          +    +GT  +M+PE      ++ 
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSA--KNTRTIQRRDSFIGTPYWMAPEVVMCETSKD 214
Query: 654 GLFSIKSDVFSFGVLLLE 671
             +  K+DV+S G+ L+E
Sbjct: 215 RPYDYKADVWSLGITLIE 232

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 94/212 (44%), Gaps = 34/212 (16%)
Query: 474 TANFSTENKLGEGGFGPVYKG-RLLNGQEVAVKRLSSQ--SGQGQEEFKNEIKLIAKLQH 530
           T  +     +G+G F  V +  +L  G E A K ++++  S +  ++ + E ++   L+H
Sbjct: 3   TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 531 RNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVR----------II 580
            N+VR                 +  +   + +FD      L      R           I
Sbjct: 63  SNIVRLHDS-------------ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCI 109
Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLD---KDMNPKISDFGMARIFGGDELQSKTK 637
           + I + +L+ HQ   + V+HRDLK  N+LL    K    K++DFG+A    GD  Q    
Sbjct: 110 QQILEAVLHCHQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGD--QQAWF 164
Query: 638 RIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLL 669
              GT GY+SPE  ++  +    D+++ GV+L
Sbjct: 165 GFAGTPGYLSPEVLRKEAYGKPVDIWACGVIL 196

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 91/198 (45%), Gaps = 17/198 (8%)
Query: 482 KLGEGGFGPVYKGRLLNGQE---VAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXX 538
           +LG+G FG VYK +  N +     A K + ++S +  E++  EI ++A   H N+V+   
Sbjct: 44  ELGDGAFGKVYKAQ--NKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 101
Query: 539 XXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRV 598
                             ++D  + +   E  L       + +     L YLH     ++
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLEL--ERPLTESQIQVVCKQTLDALNYLHDN---KI 156
Query: 599 IHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEY-----AQQ 653
           IHRDLKA NIL   D + K++DFG++          +    +GT  +M+PE      ++ 
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSA--KNTRXIQRRDXFIGTPYWMAPEVVMCETSKD 214
Query: 654 GLFSIKSDVFSFGVLLLE 671
             +  K+DV+S G+ L+E
Sbjct: 215 RPYDYKADVWSLGITLIE 232

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 91/198 (45%), Gaps = 17/198 (8%)
Query: 482 KLGEGGFGPVYKGRLLNGQE---VAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXX 538
           +LG+G FG VYK +  N +     A K + ++S +  E++  EI ++A   H N+V+   
Sbjct: 44  ELGDGAFGKVYKAQ--NKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 101
Query: 539 XXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRV 598
                             ++D  + +   E  L       + +     L YLH     ++
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLEL--ERPLTESQIQVVCKQTLDALNYLHDN---KI 156
Query: 599 IHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEY-----AQQ 653
           IHRDLKA NIL   D + K++DFG++          +    +GT  +M+PE      ++ 
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSA--KNTRXIQRRDSFIGTPYWMAPEVVMCETSKD 214
Query: 654 GLFSIKSDVFSFGVLLLE 671
             +  K+DV+S G+ L+E
Sbjct: 215 RPYDYKADVWSLGITLIE 232

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 74/140 (52%), Gaps = 13/140 (9%)
Query: 553 MPNKSLDFFLFDSTK--ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILL 610
           M   SLD  L  + +  E +LG   +V I   + +GL YL +  + +++HRD+K SNIL+
Sbjct: 86  MDGGSLDQVLKKAGRIPEQILG---KVSI--AVIKGLTYLRE--KHKIMHRDVKPSNILV 138
Query: 611 DKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLL 670
           +     K+ DFG++    G  + S     VGT  YMSPE  Q   +S++SD++S G+ L+
Sbjct: 139 NSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 194
Query: 671 ETLSSKRNTDFSNTNSLTLL 690
           E    +      +   L L+
Sbjct: 195 EMAVGRYPIPPPDAKELELM 214

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 94/218 (43%), Gaps = 7/218 (3%)
Query: 463 PMFSLASVSAATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQ-EEFKN 520
           P      V      ++  + +GEG +G V      +N   VA+K++S    Q   +    
Sbjct: 13  PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR 72
Query: 521 EIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRII 580
           EIK++   +H N++                  +    ++  L+   K   L        +
Sbjct: 73  EIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 132
Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK-TKRI 639
             I +GL Y+H  +   V+HRDLK SN+LL+   + KI DFG+AR+   D   +      
Sbjct: 133 YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEY 189
Query: 640 VGTYGYMSPEYAQQGLFSIKS-DVFSFGVLLLETLSSK 676
           V T  Y +PE         KS D++S G +L E LS++
Sbjct: 190 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 58/93 (62%), Gaps = 5/93 (5%)
Query: 579 IIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKR 638
           +++ I +GL YLH   +   IHRD+KA+N+LL +  + K++DFG+A      +++  T  
Sbjct: 125 MLKEILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT-- 179
Query: 639 IVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            VGT  +M+PE  QQ  +  K+D++S G+  +E
Sbjct: 180 FVGTPFWMAPEVIQQSAYDSKADIWSLGITAIE 212

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 20/200 (10%)
Query: 477 FSTENKLGEGGFGPVYKGRLLNGQE-VAVKRLSSQSGQGQE-EFKNEIKLIAKLQHRNLV 534
           +   + LG G F  V        Q+ VA+K ++ ++ +G+E   +NEI ++ K++H N+V
Sbjct: 20  YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTR---VRIIEGIAQGLLYLH 591
                             +    L    FD   E   G+ T     R+I  +   + YLH
Sbjct: 80  ALDDIYESGGHLYLIMQLVSGGEL----FDRIVEK--GFYTERDASRLIFQVLDAVKYLH 133
Query: 592 QYSRLRVIHRDLKASNIL---LDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSP 648
               L ++HRDLK  N+L   LD+D    ISDFG++++   ++  S      GT GY++P
Sbjct: 134 D---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAP 187
Query: 649 EYAQQGLFSIKSDVFSFGVL 668
           E   Q  +S   D +S GV+
Sbjct: 188 EVLAQKPYSKAVDCWSIGVI 207

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 11/198 (5%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
           LGEG  G V      +  + VAVK +  +      E  K EI +   L H N+V+     
Sbjct: 14  LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENL-LGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                            L    FD  + ++ +      R    +  G++YLH    + + 
Sbjct: 74  REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRD+K  N+LLD+  N KISDFG+A +F  +  +    ++ GT  Y++PE  ++  F  +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 660 S-DVFSFGVLLLETLSSK 676
             DV+S G++L   L+ +
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 74/140 (52%), Gaps = 13/140 (9%)
Query: 553 MPNKSLDFFLFDSTK--ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILL 610
           M   SLD  L  + +  E +LG   +V I   + +GL YL +  + +++HRD+K SNIL+
Sbjct: 86  MDGGSLDQVLKKAGRIPEQILG---KVSI--AVIKGLTYLRE--KHKIMHRDVKPSNILV 138
Query: 611 DKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLL 670
           +     K+ DFG++    G  + S     VGT  YMSPE  Q   +S++SD++S G+ L+
Sbjct: 139 NSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 194
Query: 671 ETLSSKRNTDFSNTNSLTLL 690
           E    +      +   L L+
Sbjct: 195 EMAVGRYPIPPPDAKELELM 214

>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338

Iteration: 1
 Score = 63.9 bits (154), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 94/206 (45%), Gaps = 28/206 (13%)
Query: 483 LGEGGFGPVYKGRLLNGQE-----VAVKRL-SSQSGQGQEEFKNEIKLIAKLQHRNLVRX 536
           LG G FG VYKG  +   E     VA+K L  + S +  +E  +E  ++A +    + R 
Sbjct: 25  LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSR- 83
Query: 537 XXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKEN--------LLGWGTRVRIIEGIAQGLL 588
                           MP       L D  +EN        LL W  +      IA+G+ 
Sbjct: 84  LLGICLTSTVQLVTQLMPYGC----LLDHVRENRGRLGSQDLLNWCMQ------IAKGMS 133
Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSP 648
           YL     +R++HRDL A N+L+    + KI+DFG+AR+   DE +           +M+ 
Sbjct: 134 YLED---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMAL 190
Query: 649 EYAQQGLFSIKSDVFSFGVLLLETLS 674
           E   +  F+ +SDV+S+GV + E ++
Sbjct: 191 ESILRRRFTHQSDVWSYGVTVWELMT 216

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 63.9 bits (154), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 89/195 (45%), Gaps = 11/195 (5%)
Query: 483 LGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXXXX 542
           +G+G FG V  G    G +VAVK + + +    + F  E  ++ +L+H NLV+       
Sbjct: 201 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 543 XXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRD 602
                        K        S   ++LG    ++    + + + YL   +    +HRD
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRD 314
Query: 603 LKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDV 662
           L A N+L+ +D   K+SDFG+ +       Q   K  V    + +PE  ++  FS KSDV
Sbjct: 315 LAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKLPV---KWTAPEALREKKFSTKSDV 369
Query: 663 FSFGVLLLETLSSKR 677
           +SFG+LL E  S  R
Sbjct: 370 WSFGILLWEIYSFGR 384

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 74/140 (52%), Gaps = 13/140 (9%)
Query: 553 MPNKSLDFFLFDSTK--ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILL 610
           M   SLD  L  + +  E +LG   +V I   + +GL YL +  + +++HRD+K SNIL+
Sbjct: 113 MDGGSLDQVLKKAGRIPEQILG---KVSI--AVIKGLTYLRE--KHKIMHRDVKPSNILV 165
Query: 611 DKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLL 670
           +     K+ DFG++    G  + S     VGT  YMSPE  Q   +S++SD++S G+ L+
Sbjct: 166 NSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 221
Query: 671 ETLSSKRNTDFSNTNSLTLL 690
           E    +      +   L L+
Sbjct: 222 EMAVGRYPIPPPDAKELELM 241

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 74/140 (52%), Gaps = 13/140 (9%)
Query: 553 MPNKSLDFFLFDSTK--ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILL 610
           M   SLD  L  + +  E +LG   +V I   + +GL YL +  + +++HRD+K SNIL+
Sbjct: 86  MDGGSLDQVLKKAGRIPEQILG---KVSI--AVIKGLTYLRE--KHKIMHRDVKPSNILV 138
Query: 611 DKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLL 670
           +     K+ DFG++    G  + S     VGT  YMSPE  Q   +S++SD++S G+ L+
Sbjct: 139 NSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 194
Query: 671 ETLSSKRNTDFSNTNSLTLL 690
           E    +      +   L L+
Sbjct: 195 EMAVGRYPIPPPDAKELELM 214

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 74/140 (52%), Gaps = 13/140 (9%)
Query: 553 MPNKSLDFFLFDSTK--ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILL 610
           M   SLD  L  + +  E +LG   +V I   + +GL YL +  + +++HRD+K SNIL+
Sbjct: 86  MDGGSLDQVLKKAGRIPEQILG---KVSI--AVIKGLTYLRE--KHKIMHRDVKPSNILV 138
Query: 611 DKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLL 670
           +     K+ DFG++    G  + S     VGT  YMSPE  Q   +S++SD++S G+ L+
Sbjct: 139 NSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 194
Query: 671 ETLSSKRNTDFSNTNSLTLL 690
           E    +      +   L L+
Sbjct: 195 EMAVGRYPIPPPDAKELELM 214

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 13/203 (6%)
Query: 475 ANFSTENKLGEGGFGPV-YKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNL 533
           ANF    K+GEG  G V        G++VAVK++  +  Q +E   NE+ ++    H N+
Sbjct: 48  ANFI---KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNV 104
Query: 534 VRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY 593
           V                  +   +L     D      +       +   + + L YLH  
Sbjct: 105 VDMYSSYLVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIATVCLSVLRALSYLHNQ 160
Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQ 653
               VIHRD+K+ +ILL  D   K+SDFG       +    K K +VGT  +M+PE   +
Sbjct: 161 G---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKE--VPKRKXLVGTPYWMAPEVISR 215
Query: 654 GLFSIKSDVFSFGVLLLETLSSK 676
             +  + D++S G++++E +  +
Sbjct: 216 LPYGTEVDIWSLGIMVIEMIDGE 238

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 20/194 (10%)
Query: 483 LGEGGFGPVYKGRLLNGQE-VAVKRLSSQSGQGQE-EFKNEIKLIAKLQHRNLVRXXXXX 540
           LG G F  V        Q+ VA+K ++ ++ +G+E   +NEI ++ K++H N+V      
Sbjct: 26  LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTR---VRIIEGIAQGLLYLHQYSRLR 597
                       +    L    FD   E   G+ T     R+I  +   + YLH    L 
Sbjct: 86  ESGGHLYLIMQLVSGGEL----FDRIVEK--GFYTERDASRLIFQVLDAVKYLHD---LG 136
Query: 598 VIHRDLKASNIL---LDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG 654
           ++HRDLK  N+L   LD+D    ISDFG++++   ++  S      GT GY++PE   Q 
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQK 193
Query: 655 LFSIKSDVFSFGVL 668
            +S   D +S GV+
Sbjct: 194 PYSKAVDCWSIGVI 207

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 99/217 (45%), Gaps = 16/217 (7%)
Query: 464 MFSLASVSAATANFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKN 520
           MF  +     +  +    KLG G +G V   R  +   E A+K  R +S S     +   
Sbjct: 26  MFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLE 85
Query: 521 EIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRII 580
           E+ ++  L H N+++                      L   +    K N +       II
Sbjct: 86  EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV---II 142
Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILL---DKDMNPKISDFGMARIFGGDELQSKTK 637
           + +  G+ YLH+++   ++HRDLK  N+LL   +KD   KI DFG++ +F   E Q K K
Sbjct: 143 KQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVF---ENQKKMK 196
Query: 638 RIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +GT  Y++PE  ++  +  K DV+S GV+L   L+
Sbjct: 197 ERLGTAYYIAPEVLRKK-YDEKCDVWSIGVILFILLA 232

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 99/222 (44%), Gaps = 49/222 (22%)
Query: 479 TENKLGEGGFGPVYKGRLL----NGQEVAVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNL 533
           ++  +G+G FG VY G  +    N  + A+K LS  +   Q E F  E  L+  L H N+
Sbjct: 25  SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84
Query: 534 VRXXXXXXXXXXXXXXXXXMPNKSLDFFLF-----------------DSTKENLLGWGTR 576
           +                  +P + L   L                  + T ++L+ +G +
Sbjct: 85  L------------ALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQ 132
Query: 577 VRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL---- 632
           V      A+G+ YL   +  + +HRDL A N +LD+    K++DFG+AR     E     
Sbjct: 133 V------ARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQ 183
Query: 633 QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           Q +  R+     + + E  Q   F+ KSDV+SFGVLL E L+
Sbjct: 184 QHRHARL--PVKWTALESLQTYRFTTKSDVWSFGVLLWELLT 223

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 87/203 (42%), Gaps = 16/203 (7%)
Query: 481 NKLGEGGFGPVYKGR--LLNGQ--EVAVKRLSSQ---SGQGQEEFKNEIKLIAKLQHRNL 533
            KLG+G FG V +G     +G+   VAVK L        +  ++F  E+  +  L HRNL
Sbjct: 18  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 534 VRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY 593
           +R                  P  SL   L       LL  GT  R    +A+G+ YL   
Sbjct: 78  IRLYGVVLTPPMKMVTELA-PLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLESK 134
Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMARIF--GGDELQSKTKRIVGTYGYMSPEYA 651
              R IHRDL A N+LL      KI DFG+ R      D    +  R V  + + +PE  
Sbjct: 135 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPESL 190
Query: 652 QQGLFSIKSDVFSFGVLLLETLS 674
           +   FS  SD + FGV L E  +
Sbjct: 191 KTRTFSHASDTWMFGVTLWEMFT 213

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 104/216 (48%), Gaps = 22/216 (10%)
Query: 471 SAATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVK-----RLSS-QSGQGQEEFKNEIK 523
           S    ++    +LG G F  V K R    G+E A K     RLSS + G  +EE + E+ 
Sbjct: 1   SMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 60
Query: 524 LIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGI 583
           ++ +++H N++                  +    L  F F + KE+L       + ++ I
Sbjct: 61  ILREIRHPNIITLHDIFENKTDVVLILELVSGGEL--FDFLAEKESLT-EDEATQFLKQI 117
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNI-LLDKDM-NPKIS--DFGMA-RIFGGDELQSKTKR 638
             G+ YLH     R+ H DLK  NI LLDK++ NP+I   DFG+A +I  G+E     K 
Sbjct: 118 LDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF----KN 170
Query: 639 IVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           I GT  +++PE        +++D++S GV+    LS
Sbjct: 171 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 206

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 116/291 (39%), Gaps = 31/291 (10%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLN-GQE-----VAVKRLSSQSGQGQEE-FKNEIKLIAKL 528
           N      LG G FG V +      G+E     VAVK L S +   ++E   +E+K+++ L
Sbjct: 39  NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 98
Query: 529 -QHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENL-------LGWGTRVRII 580
            QH N+V                       L  FL    + +L       L     +   
Sbjct: 99  GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFS 158
Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIV 640
             +AQG+ +L   +    IHRD+ A N+LL      KI DFG+AR    D          
Sbjct: 159 SQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 215
Query: 641 GTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDD 700
               +M+PE     +++++SDV+S+G+LL E  S   N        + +    + L KD 
Sbjct: 216 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP----YPGILVNSKFYKLVKD- 270
Query: 701 RAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKT 751
             +++  P    +  Y I+         C   +   RPT  ++ S L  + 
Sbjct: 271 -GYQMAQPAFAPKNIYSIMQA-------CWALEPTHRPTFQQICSFLQEQA 313

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 95/205 (46%), Gaps = 27/205 (13%)
Query: 482 KLGEGGFGPVYKGRLLNGQ-EVAVKRLS-SQSGQGQ------------EEFKNEIKLIAK 527
           KLG G +G V   +  NG  E A+K +  SQ  +G+            EE  NEI L+  
Sbjct: 43  KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 528 LQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGL 587
           L H N+++                      L   + +  K           I++ I  G+
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK---FDECDAANIMKQILSGI 159
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKD---MNPKISDFGMARIFGGDELQSKTKRIVGTYG 644
            YLH+++   ++HRD+K  NILL+     +N KI DFG++  F  D    K +  +GT  
Sbjct: 160 CYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD---YKLRDRLGTAY 213
Query: 645 YMSPEYAQQGLFSIKSDVFSFGVLL 669
           Y++PE  ++  ++ K DV+S GV++
Sbjct: 214 YIAPEVLKKK-YNEKCDVWSCGVIM 237

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 69/121 (57%), Gaps = 13/121 (10%)
Query: 553 MPNKSLDFFLFDSTK--ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILL 610
           M   SLD  L  + +  E +LG   +V I   + +GL YL +  + +++HRD+K SNIL+
Sbjct: 86  MDGGSLDQVLKKAGRIPEQILG---KVSI--AVIKGLTYLRE--KHKIMHRDVKPSNILV 138
Query: 611 DKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLL 670
           +     K+ DFG++    G  + S     VGT  YMSPE  Q   +S++SD++S G+ L+
Sbjct: 139 NSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 194
Query: 671 E 671
           E
Sbjct: 195 E 195

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 88/195 (45%), Gaps = 11/195 (5%)
Query: 483 LGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXXXX 542
           +G+G FG V  G    G +VAVK + + +    + F  E  ++ +L+H NLV+       
Sbjct: 14  IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 543 XXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRD 602
                        K        S   ++LG    ++    + + + YL   +    +HRD
Sbjct: 71  EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRD 127
Query: 603 LKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDV 662
           L A N+L+ +D   K+SDFG+ +     E  S          + +PE  ++  FS KSDV
Sbjct: 128 LAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKSDV 182
Query: 663 FSFGVLLLETLSSKR 677
           +SFG+LL E  S  R
Sbjct: 183 WSFGILLWEIYSFGR 197

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 87/203 (42%), Gaps = 16/203 (7%)
Query: 481 NKLGEGGFGPVYKGR--LLNGQ--EVAVKRLSSQ---SGQGQEEFKNEIKLIAKLQHRNL 533
            KLG+G FG V +G     +G+   VAVK L        +  ++F  E+  +  L HRNL
Sbjct: 14  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 534 VRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY 593
           +R                  P  SL   L       LL  GT  R    +A+G+ YL   
Sbjct: 74  IRLYGVVLTPPMKMVTELA-PLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLESK 130
Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMARIF--GGDELQSKTKRIVGTYGYMSPEYA 651
              R IHRDL A N+LL      KI DFG+ R      D    +  R V  + + +PE  
Sbjct: 131 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV-PFAWCAPESL 186
Query: 652 QQGLFSIKSDVFSFGVLLLETLS 674
           +   FS  SD + FGV L E  +
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFT 209

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 103/211 (48%), Gaps = 22/211 (10%)
Query: 476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVK-----RLSS-QSGQGQEEFKNEIKLIAKL 528
           ++    +LG G F  V K R    G+E A K     RLSS + G  +EE + E+ ++ ++
Sbjct: 13  HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI 72
Query: 529 QHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLL 588
           +H N++                  +    L  F F + KE+L       + ++ I  G+ 
Sbjct: 73  RHPNIITLHDIFENKTDVVLILELVSGGEL--FDFLAEKESLT-EDEATQFLKQILDGVH 129
Query: 589 YLHQYSRLRVIHRDLKASNI-LLDKDM-NPKIS--DFGMA-RIFGGDELQSKTKRIVGTY 643
           YLH     R+ H DLK  NI LLDK++ NP+I   DFG+A +I  G+E     K I GT 
Sbjct: 130 YLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF----KNIFGTP 182
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
            +++PE        +++D++S GV+    LS
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLS 213

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 104/216 (48%), Gaps = 22/216 (10%)
Query: 471 SAATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVK-----RL-SSQSGQGQEEFKNEIK 523
           S    ++    +LG G F  V K R    G+E A K     RL SS+ G  +EE + E+ 
Sbjct: 22  SMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVN 81
Query: 524 LIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGI 583
           ++ +++H N++                  +    L  F F + KE+L       + ++ I
Sbjct: 82  ILREIRHPNIITLHDIFENKTDVVLILELVSGGEL--FDFLAEKESLT-EDEATQFLKQI 138
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNI-LLDKDM-NPKIS--DFGMA-RIFGGDELQSKTKR 638
             G+ YLH     R+ H DLK  NI LLDK++ NP+I   DFG+A +I  G+E     K 
Sbjct: 139 LDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF----KN 191
Query: 639 IVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           I GT  +++PE        +++D++S GV+    LS
Sbjct: 192 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 227

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 87/203 (42%), Gaps = 16/203 (7%)
Query: 481 NKLGEGGFGPVYKGR--LLNGQ--EVAVKRLSSQ---SGQGQEEFKNEIKLIAKLQHRNL 533
            KLG+G FG V +G     +G+   VAVK L        +  ++F  E+  +  L HRNL
Sbjct: 14  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 534 VRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY 593
           +R                  P  SL   L       LL  GT  R    +A+G+ YL   
Sbjct: 74  IRLYGVVLTPPMKMVTELA-PLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLESK 130
Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMARIF--GGDELQSKTKRIVGTYGYMSPEYA 651
              R IHRDL A N+LL      KI DFG+ R      D    +  R V  + + +PE  
Sbjct: 131 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPESL 186
Query: 652 QQGLFSIKSDVFSFGVLLLETLS 674
           +   FS  SD + FGV L E  +
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFT 209

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 88/196 (44%), Gaps = 10/196 (5%)
Query: 482 KLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
           K+GEG  G V    + + G+ VAVK++  +  Q +E   NE+ ++   QH N+V      
Sbjct: 27  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIH 600
                       +   +L     D      +       +   + Q L  LH      VIH
Sbjct: 87  LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 139
Query: 601 RDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKS 660
           RD+K+ +ILL  D   K+SDFG       +    + K +VGT  +M+PE   +  +  + 
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPEV 197
Query: 661 DVFSFGVLLLETLSSK 676
           D++S G++++E +  +
Sbjct: 198 DIWSLGIMVIEMVDGE 213

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 70/121 (57%), Gaps = 13/121 (10%)
Query: 553 MPNKSLDFFLFDSTK--ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILL 610
           M   SLD  L ++ +  E +LG   +V I   + +GL YL +  + +++HRD+K SNIL+
Sbjct: 96  MDGGSLDQVLKEAKRIPEEILG---KVSI--AVLRGLAYLRE--KHQIMHRDVKPSNILV 148
Query: 611 DKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLL 670
           +     K+ DFG++    G  + S     VGT  YM+PE  Q   +S++SD++S G+ L+
Sbjct: 149 NSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLV 204
Query: 671 E 671
           E
Sbjct: 205 E 205

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 62.8 bits (151), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 88/195 (45%), Gaps = 11/195 (5%)
Query: 483 LGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXXXX 542
           +G+G FG V  G    G +VAVK + + +    + F  E  ++ +L+H NLV+       
Sbjct: 29  IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 543 XXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRD 602
                        K        S   ++LG    ++    + + + YL   +    +HRD
Sbjct: 86  EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRD 142
Query: 603 LKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDV 662
           L A N+L+ +D   K+SDFG+ +     E  S          + +PE  ++  FS KSDV
Sbjct: 143 LAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKSDV 197
Query: 663 FSFGVLLLETLSSKR 677
           +SFG+LL E  S  R
Sbjct: 198 WSFGILLWEIYSFGR 212

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 62.8 bits (151), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 87/203 (42%), Gaps = 16/203 (7%)
Query: 481 NKLGEGGFGPVYKGR--LLNGQ--EVAVKRLSSQ---SGQGQEEFKNEIKLIAKLQHRNL 533
            KLG+G FG V +G     +G+   VAVK L        +  ++F  E+  +  L HRNL
Sbjct: 14  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 534 VRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY 593
           +R                  P  SL   L       LL  GT  R    +A+G+ YL   
Sbjct: 74  IRLYGVVLTPPMKMVTELA-PLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLESK 130
Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMARIF--GGDELQSKTKRIVGTYGYMSPEYA 651
              R IHRDL A N+LL      KI DFG+ R      D    +  R V  + + +PE  
Sbjct: 131 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPESL 186
Query: 652 QQGLFSIKSDVFSFGVLLLETLS 674
           +   FS  SD + FGV L E  +
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFT 209

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 62.8 bits (151), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 14/195 (7%)
Query: 481 NKLGEGGFGPVYKG-RLLNGQEVAVKRLSSQ--SGQGQEEFKNEIKLIAKLQHRNLVRXX 537
            +LG+G F  V +  ++L GQE A K ++++  S +  ++ + E ++   L+H N+VR  
Sbjct: 28  EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 87
Query: 538 XXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLR 597
                          +    L     D               I+ I + +L+ HQ   + 
Sbjct: 88  DSISEEGHHYLIFDLVTGGEL---FEDIVAREYYSEADASHCIQQILEAVLHCHQ---MG 141
Query: 598 VIHRDLKASNILLD---KDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG 654
           V+HRDLK  N+LL    K    K++DFG+A    G+  Q       GT GY+SPE  ++ 
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGE--QQAWFGFAGTPGYLSPEVLRKD 199
Query: 655 LFSIKSDVFSFGVLL 669
            +    D+++ GV+L
Sbjct: 200 PYGKPVDLWACGVIL 214

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 62.8 bits (151), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 68/121 (56%), Gaps = 13/121 (10%)
Query: 553 MPNKSLDFFLFDSTK--ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILL 610
           M   SLD  L  + +  E +LG     ++   + +GL YL +  + +++HRD+K SNIL+
Sbjct: 105 MDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILV 157
Query: 611 DKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLL 670
           +     K+ DFG++    G  + S     VGT  YMSPE  Q   +S++SD++S G+ L+
Sbjct: 158 NSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 213
Query: 671 E 671
           E
Sbjct: 214 E 214

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 62.8 bits (151), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 15/200 (7%)
Query: 477 FSTENKLGEGGFGPVY-KGRLLNGQEVAVKRLSSQSGQ-GQEEFKNEIKLIAKLQHRNLV 534
           F  + KLG G FG V+      +G E  +K ++    Q   E+ + EI+++  L H N++
Sbjct: 24  FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 535 RXXXXXXXXXXXXXXXXXMPN-KSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY 593
           +                     + L+  +    +   L  G    +++ +   L Y H  
Sbjct: 84  KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ 143
Query: 594 SRLRVIHRDLKASNILLDKDMNP----KISDFGMARIFGGDELQSKTKRIVGTYGYMSPE 649
               V+H+DLK  NIL  +D +P    KI DFG+A +F  DE    +    GT  YM+PE
Sbjct: 144 ---HVVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSDE---HSTNAAGTALYMAPE 196
Query: 650 YAQQGLFSIKSDVFSFGVLL 669
             ++ + + K D++S GV++
Sbjct: 197 VFKRDV-TFKCDIWSAGVVM 215

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 88/196 (44%), Gaps = 10/196 (5%)
Query: 482 KLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
           K+GEG  G V    + + G+ VAVK++  +  Q +E   NE+ ++   QH N+V      
Sbjct: 31  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIH 600
                       +   +L     D      +       +   + Q L  LH      VIH
Sbjct: 91  LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 143
Query: 601 RDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKS 660
           RD+K+ +ILL  D   K+SDFG       +    + K +VGT  +M+PE   +  +  + 
Sbjct: 144 RDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPEV 201
Query: 661 DVFSFGVLLLETLSSK 676
           D++S G++++E +  +
Sbjct: 202 DIWSLGIMVIEMVDGE 217

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 116/291 (39%), Gaps = 31/291 (10%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLN-GQE-----VAVKRLSSQSGQGQEE-FKNEIKLIAKL 528
           N      LG G FG V +      G+E     VAVK L S +   ++E   +E+K+++ L
Sbjct: 47  NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 106
Query: 529 -QHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENL-------LGWGTRVRII 580
            QH N+V                       L  FL    + +L       L     +   
Sbjct: 107 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFS 166
Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIV 640
             +AQG+ +L   +    IHRD+ A N+LL      KI DFG+AR    D          
Sbjct: 167 SQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 223
Query: 641 GTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDD 700
               +M+PE     +++++SDV+S+G+LL E  S   N        + +    + L KD 
Sbjct: 224 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP----YPGILVNSKFYKLVKD- 278
Query: 701 RAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKT 751
             +++  P    +  Y I+         C   +   RPT  ++ S L  + 
Sbjct: 279 -GYQMAQPAFAPKNIYSIMQA-------CWALEPTHRPTFQQICSFLQEQA 321

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 5/93 (5%)
Query: 579 IIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKR 638
           I+  I +GL YLH   +   IHRD+KA+N+LL +    K++DFG+A      +++  T  
Sbjct: 109 ILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT-- 163
Query: 639 IVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            VGT  +M+PE  +Q  +  K+D++S G+  +E
Sbjct: 164 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIE 196

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 89/197 (45%), Gaps = 12/197 (6%)
Query: 482 KLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
           K+GEG  G V    + + G+ VAVK++  +  Q +E   NE+ ++   QH N+V      
Sbjct: 38  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 541 XXXXXXXXXXXXMPNKSL-DFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                       +   +L D        E  +       +   + Q L  LH      VI
Sbjct: 98  LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA-----VCLAVLQALSVLHAQG---VI 149
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRD+K+ +ILL  D   K+SDFG       +    + K +VGT  +M+PE   +  +  +
Sbjct: 150 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPE 207
Query: 660 SDVFSFGVLLLETLSSK 676
            D++S G++++E +  +
Sbjct: 208 VDIWSLGIMVIEMVDGE 224

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 87/203 (42%), Gaps = 16/203 (7%)
Query: 481 NKLGEGGFGPVYKGR--LLNGQ--EVAVKRLSSQ---SGQGQEEFKNEIKLIAKLQHRNL 533
            KLG+G FG V +G     +G+   VAVK L        +  ++F  E+  +  L HRNL
Sbjct: 24  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 534 VRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY 593
           +R                  P  SL   L       LL  GT  R    +A+G+ YL   
Sbjct: 84  IRLYGVVLTPPMKMVTELA-PLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLESK 140
Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMARIF--GGDELQSKTKRIVGTYGYMSPEYA 651
              R IHRDL A N+LL      KI DFG+ R      D    +  R V  + + +PE  
Sbjct: 141 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV-PFAWCAPESL 196
Query: 652 QQGLFSIKSDVFSFGVLLLETLS 674
           +   FS  SD + FGV L E  +
Sbjct: 197 KTRTFSHASDTWMFGVTLWEMFT 219

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 55/93 (59%), Gaps = 5/93 (5%)
Query: 579 IIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKR 638
           I+  I +GL YLH   +   IHRD+KA+N+LL +    K++DFG+A      + Q K   
Sbjct: 124 ILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNX 178
Query: 639 IVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            VGT  +M+PE  +Q  +  K+D++S G+  +E
Sbjct: 179 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIE 211

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 89/197 (45%), Gaps = 12/197 (6%)
Query: 482 KLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
           K+GEG  G V    + + G+ VAVK++  +  Q +E   NE+ ++   QH N+V      
Sbjct: 36  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 541 XXXXXXXXXXXXMPNKSL-DFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                       +   +L D        E  +       +   + Q L  LH      VI
Sbjct: 96  LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA-----VCLAVLQALSVLHAQG---VI 147
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRD+K+ +ILL  D   K+SDFG       +    + K +VGT  +M+PE   +  +  +
Sbjct: 148 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPE 205
Query: 660 SDVFSFGVLLLETLSSK 676
            D++S G++++E +  +
Sbjct: 206 VDIWSLGIMVIEMVDGE 222

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 87/203 (42%), Gaps = 16/203 (7%)
Query: 481 NKLGEGGFGPVYKGR--LLNGQ--EVAVKRLSSQ---SGQGQEEFKNEIKLIAKLQHRNL 533
            KLG+G FG V +G     +G+   VAVK L        +  ++F  E+  +  L HRNL
Sbjct: 18  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 534 VRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY 593
           +R                  P  SL   L       LL  GT  R    +A+G+ YL   
Sbjct: 78  IRLYGVVLTPPMKMVTELA-PLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLESK 134
Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMARIF--GGDELQSKTKRIVGTYGYMSPEYA 651
              R IHRDL A N+LL      KI DFG+ R      D    +  R V  + + +PE  
Sbjct: 135 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPESL 190
Query: 652 QQGLFSIKSDVFSFGVLLLETLS 674
           +   FS  SD + FGV L E  +
Sbjct: 191 KTRTFSHASDTWMFGVTLWEMFT 213

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 87/203 (42%), Gaps = 16/203 (7%)
Query: 481 NKLGEGGFGPVYKGR--LLNGQ--EVAVKRLSSQ---SGQGQEEFKNEIKLIAKLQHRNL 533
            KLG+G FG V +G     +G+   VAVK L        +  ++F  E+  +  L HRNL
Sbjct: 24  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 534 VRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY 593
           +R                  P  SL   L       LL  GT  R    +A+G+ YL   
Sbjct: 84  IRLYGVVLTPPMKMVTELA-PLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLESK 140
Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMARIF--GGDELQSKTKRIVGTYGYMSPEYA 651
              R IHRDL A N+LL      KI DFG+ R      D    +  R V  + + +PE  
Sbjct: 141 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPESL 196
Query: 652 QQGLFSIKSDVFSFGVLLLETLS 674
           +   FS  SD + FGV L E  +
Sbjct: 197 KTRTFSHASDTWMFGVTLWEMFT 219

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG 644
           QG+ YLH     RVIHRDLK  N+ L+ DM+ KI DFG+A     D  + KT  + GT  
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT--LCGTPN 207
Query: 645 YMSPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           Y++PE   +   S + D++S G +L   L  K
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 55/93 (59%), Gaps = 5/93 (5%)
Query: 579 IIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKR 638
           I+  I +GL YLH   +   IHRD+KA+N+LL +    K++DFG+A      + Q K   
Sbjct: 109 ILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNX 163
Query: 639 IVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            VGT  +M+PE  +Q  +  K+D++S G+  +E
Sbjct: 164 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIE 196

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 92/218 (42%), Gaps = 15/218 (6%)
Query: 475 ANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSS---QSGQGQEEFKNEIKLIAKLQH 530
            N+     +G+G F  V   R +L G+EVAVK +      S   Q+ F+ E+++   L H
Sbjct: 14  GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIXKVLNH 72
Query: 531 RNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYL 590
            N+V+                      +  +L    +        + R I    Q   Y 
Sbjct: 73  PNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQ---YC 129
Query: 591 HQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEY 650
           HQ     ++HRDLKA N+LLD D N KI+DFG +  F      +K     G   Y +PE 
Sbjct: 130 HQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEF---TFGNKLDAFCGAPPYAAPEL 183
Query: 651 AQQGLF-SIKSDVFSFGVLLLETLSSKRNTDFSNTNSL 687
            Q   +   + DV+S GV+L   +S     D  N   L
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 221

>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 44/214 (20%)
Query: 483 LGEGGFGPVYKGRLLNGQE-----VAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRX 536
           LG G FG V+KG  +   E     V +K +  +SG Q  +   + +  I  L H ++VR 
Sbjct: 39  LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR- 97
Query: 537 XXXXXXXXXXXXXXXXMPNKSLDFF--------LFDSTKEN--------LLGWGTRVRII 580
                            P  SL           L D  +++        LL WG +    
Sbjct: 98  ------------LLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ---- 141
Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIV 640
             IA+G+ YL ++    ++HR+L A N+LL      +++DFG+A +   D+ Q       
Sbjct: 142 --IAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAK 196
Query: 641 GTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
               +M+ E    G ++ +SDV+S+GV + E ++
Sbjct: 197 TPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 5/93 (5%)
Query: 579 IIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKR 638
           I+  I +GL YLH   +   IHRD+KA+N+LL +    K++DFG+A      +++  T  
Sbjct: 129 ILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT-- 183
Query: 639 IVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            VGT  +M+PE  +Q  +  K+D++S G+  +E
Sbjct: 184 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIE 216

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 17/199 (8%)
Query: 482 KLGEGGFGPVYKGRLLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           K+GEG +G VYK +   G+  A+K  RL  +          EI ++ +L+H N+V+    
Sbjct: 9   KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 540 XXXXXXXXXXXXXMPN---KSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRL 596
                        +     K LD  + +   E++      ++++ GIA    Y H     
Sbjct: 69  IHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIA----YCHDR--- 119
Query: 597 RVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ-QGL 655
           RV+HRDLK  N+L++++   KI+DFG+AR F G  ++  T  IV T  Y +P+       
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEIV-TLWYRAPDVLMGSKK 177
Query: 656 FSIKSDVFSFGVLLLETLS 674
           +S   D++S G +  E ++
Sbjct: 178 YSTTIDIWSVGCIFAEMVN 196

>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 44/214 (20%)
Query: 483 LGEGGFGPVYKGRLLNGQE-----VAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRX 536
           LG G FG V+KG  +   E     V +K +  +SG Q  +   + +  I  L H ++VR 
Sbjct: 21  LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR- 79
Query: 537 XXXXXXXXXXXXXXXXMPNKSLDFF--------LFDSTKEN--------LLGWGTRVRII 580
                            P  SL           L D  +++        LL WG +    
Sbjct: 80  ------------LLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ---- 123
Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIV 640
             IA+G+ YL ++    ++HR+L A N+LL      +++DFG+A +   D+ Q       
Sbjct: 124 --IAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAK 178
Query: 641 GTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
               +M+ E    G ++ +SDV+S+GV + E ++
Sbjct: 179 TPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 483 LGEGGFGPVYKGRLLNGQEVAVKRLSSQS----GQGQEEFKNEIKLIAKLQHRNLVRXXX 538
           LG+GGF   ++    + +EV   ++  +S       +E+   EI +   L H+++V    
Sbjct: 29  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 539 XXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRV 598
                            +SL   L    +   L        +  I  G  YLH   R RV
Sbjct: 89  FFEDNDFVFVVLELCRRRSL---LELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRV 142
Query: 599 IHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSI 658
           IHRDLK  N+ L++D+  KI DFG+A     D  + KT  + GT  Y++PE   +   S 
Sbjct: 143 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHSF 200
Query: 659 KSDVFSFGVLLLETLSSK 676
           + DV+S G ++   L  K
Sbjct: 201 EVDVWSIGCIMYTLLVGK 218

>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 98/224 (43%), Gaps = 20/224 (8%)
Query: 467 LASVSAATANFSTENKLGEGGFGPVYKGRLLNGQ----EVAVKRLSSQ--SGQGQEEFKN 520
           L  V      F+    LG+G FG V + +L        +VAVK L +   +    EEF  
Sbjct: 15  LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLR 74
Query: 521 EIKLIAKLQHRNLVRXXXXXXXXXXX------XXXXXXMPNKSLDFFLFDS-TKENL--L 571
           E   + +  H ++ +                       M +  L  FL  S   EN   L
Sbjct: 75  EAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNL 134
Query: 572 GWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGD 630
              T VR +  IA G+ YL   S    IHRDL A N +L +DM   ++DFG++R I+ GD
Sbjct: 135 PLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGD 191
Query: 631 ELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +      +    +++ E     L+++ SDV++FGV + E ++
Sbjct: 192 YYRQGCASKLPV-KWLALESLADNLYTVHSDVWAFGVTMWEIMT 234

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 68/121 (56%), Gaps = 13/121 (10%)
Query: 553 MPNKSLDFFLFDSTK--ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILL 610
           M   SLD  L  + +  E +LG   +V I   + +GL YL +  + +++HRD+K SNIL+
Sbjct: 89  MDGGSLDQVLKKAGRIPEQILG---KVSI--AVIKGLTYLRE--KHKIMHRDVKPSNILV 141
Query: 611 DKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLL 670
           +     K+ DFG++    G  +       VGT  YMSPE  Q   +S++SD++S G+ L+
Sbjct: 142 NSRGEIKLCDFGVS----GQLIDEMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 197
Query: 671 E 671
           E
Sbjct: 198 E 198

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 97/219 (44%), Gaps = 16/219 (7%)
Query: 475 ANFSTENKLGEGGFGPVYKG-RLLNGQEVAVKRLSSQSGQGQE---EFKNEIKLIAKLQH 530
            ++   + LG G FG V  G   L G +VAVK L+ Q  +  +   + K EI+ +   +H
Sbjct: 11  GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRH 70
Query: 531 RNLVRXXXXXXXXXXXXXXXXXMPNKSL-DFFLFDSTKENLLGWGTRVRIIEGIAQGLLY 589
            ++++                 +    L D+       E +       R+ + I   + Y
Sbjct: 71  PHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR----RLFQQILSAVDY 126
Query: 590 LHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPE 649
            H++    V+HRDLK  N+LLD  MN KI+DFG++ +    E    +    G+  Y +PE
Sbjct: 127 CHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS---CGSPNYAAPE 180
Query: 650 YAQQGLFS-IKSDVFSFGVLLLETLSSKRNTDFSNTNSL 687
                L++  + D++S GV+L   L      D  +  +L
Sbjct: 181 VISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTL 219

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 483 LGEGGFGPVYKGRLLNGQEVAVKRLSSQS----GQGQEEFKNEIKLIAKLQHRNLVRXXX 538
           LG+GGF   ++    + +EV   ++  +S       +E+   EI +   L H+++V    
Sbjct: 25  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 539 XXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRV 598
                            +SL   L    +   L        +  I  G  YLH   R RV
Sbjct: 85  FFEDNDFVFVVLELCRRRSL---LELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRV 138
Query: 599 IHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSI 658
           IHRDLK  N+ L++D+  KI DFG+A     D  + KT  + GT  Y++PE   +   S 
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHSF 196
Query: 659 KSDVFSFGVLLLETLSSK 676
           + DV+S G ++   L  K
Sbjct: 197 EVDVWSIGCIMYTLLVGK 214

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 483 LGEGGFGPVYKGRLLNGQEVAVKRLSSQS----GQGQEEFKNEIKLIAKLQHRNLVRXXX 538
           LG+GGF   ++    + +EV   ++  +S       +E+   EI +   L H+++V    
Sbjct: 25  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 539 XXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRV 598
                            +SL   L    +   L        +  I  G  YLH   R RV
Sbjct: 85  FFEDNDFVFVVLELCRRRSL---LELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRV 138
Query: 599 IHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSI 658
           IHRDLK  N+ L++D+  KI DFG+A     D  + KT  + GT  Y++PE   +   S 
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHSF 196
Query: 659 KSDVFSFGVLLLETLSSK 676
           + DV+S G ++   L  K
Sbjct: 197 EVDVWSIGCIMYTLLVGK 214

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 97/219 (44%), Gaps = 16/219 (7%)
Query: 475 ANFSTENKLGEGGFGPVYKG-RLLNGQEVAVKRLSSQSGQGQE---EFKNEIKLIAKLQH 530
            ++   + LG G FG V  G   L G +VAVK L+ Q  +  +   + K EI+ +   +H
Sbjct: 11  GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRH 70
Query: 531 RNLVRXXXXXXXXXXXXXXXXXMPNKSL-DFFLFDSTKENLLGWGTRVRIIEGIAQGLLY 589
            ++++                 +    L D+       E +       R+ + I   + Y
Sbjct: 71  PHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR----RLFQQILSAVDY 126
Query: 590 LHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPE 649
            H++    V+HRDLK  N+LLD  MN KI+DFG++ +    E    +    G+  Y +PE
Sbjct: 127 CHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDS---CGSPNYAAPE 180
Query: 650 YAQQGLFS-IKSDVFSFGVLLLETLSSKRNTDFSNTNSL 687
                L++  + D++S GV+L   L      D  +  +L
Sbjct: 181 VISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTL 219

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 12/194 (6%)
Query: 482 KLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
           K+GEG  G V    + + G+ VAVK++  +  Q +E   NE+ ++   QH N+V      
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 541 XXXXXXXXXXXXMPNKSL-DFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                       +   +L D        E  +       +   + Q L  LH      VI
Sbjct: 218 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA-----VCLAVLQALSVLHAQG---VI 269
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRD+K+ +ILL  D   K+SDFG       +    + K +VGT  +M+PE   +  +  +
Sbjct: 270 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPE 327
Query: 660 SDVFSFGVLLLETL 673
            D++S G++++E +
Sbjct: 328 VDIWSLGIMVIEMV 341

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 110/236 (46%), Gaps = 27/236 (11%)
Query: 468 ASVSAATANFSTENKLGEGGFGPVYKGRLL----NGQEVAVKRLSSQSGQGQEEFKNEIK 523
            S  A  ++F     LG+G FG V+  R +    +G   A+K L   + + ++  + +++
Sbjct: 21  GSEKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKME 80
Query: 524 --LIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFF----LFDSTKENLLGWGTRV 577
             ++A + H  +V+                      LDF     LF    + ++     V
Sbjct: 81  RDILADVNHPFVVKLHYAFQTEGKLYLI--------LDFLRGGDLFTRLSKEVMFTEEDV 132
Query: 578 RI-IEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKT 636
           +  +  +A GL +LH    L +I+RDLK  NILLD++ + K++DFG+++     + + K 
Sbjct: 133 KFYLAELALGLDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK--EAIDHEKKA 187
Query: 637 KRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSK---RNTDFSNTNSLTL 689
               GT  YM+PE   +   S  +D +S+GVL+ E L+     +  D   T +L L
Sbjct: 188 YSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLIL 243

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 482 KLGEGGFGPVYKG--RLLNGQ-EVAVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNLVRXX 537
           +LG G FG V +G  R+   Q +VA+K L   + +   EE   E +++ +L +  +VR  
Sbjct: 17  ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 538 XXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLR 597
                               L  FL    +E  +       ++  ++ G+ YL + +   
Sbjct: 77  GVCQAEALMLVMEMA-GGGPLHKFLVGKREE--IPVSNVAELLHQVSMGMKYLEEKN--- 130
Query: 598 VIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY--GYMSPEYAQQGL 655
            +HRDL A N+LL      KISDFG+++  G D+    T R  G +   + +PE      
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADD-SYYTARSAGKWPLKWYAPECINFRK 189
Query: 656 FSIKSDVFSFGVLLLETLS 674
           FS +SDV+S+GV + E LS
Sbjct: 190 FSSRSDVWSYGVTMWEALS 208

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 101/230 (43%), Gaps = 37/230 (16%)
Query: 476 NFSTENKLGEGGFGPVYKGRL--LNGQE----VAVKRLSSQSGQGQ-EEFKNEIKLIAKL 528
           N      LGEG FG V K     L G+     VAVK L   +   +  +  +E  ++ ++
Sbjct: 24  NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV 83
Query: 529 QHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTK--------------------- 567
            H ++++                     SL  FL +S K                     
Sbjct: 84  NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 568 ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-I 626
           E  L  G  +     I+QG+ YL   + ++++HRDL A NIL+ +    KISDFG++R +
Sbjct: 144 ERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDV 200
Query: 627 FGGDELQSKTKRIVG--TYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           +  D   S  KR  G     +M+ E     +++ +SDV+SFGVLL E ++
Sbjct: 201 YEED---SXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG 644
           QG+ YLH     RVIHRDLK  N+ L+ DM+ KI DFG+A     D    + K + GT  
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD--GERKKXLCGTPN 207
Query: 645 YMSPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           Y++PE   +   S + D++S G +L   L  K
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 22/210 (10%)
Query: 477 FSTENKLGEGGFGPVYKGRLLN-GQEVAVKRL------SSQSGQGQEEFKNEIKLIAKLQ 529
           + T  +LG G F  V K R  + G + A K +      SS+ G  +E+ + E+ ++ ++Q
Sbjct: 13  YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLY 589
           H N++                  +    L  F F + KE+L         ++ I  G+ Y
Sbjct: 73  HPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEA-TEFLKQILNGVYY 129
Query: 590 LHQYSRLRVIHRDLKASNI-LLDKDM---NPKISDFGMA-RIFGGDELQSKTKRIVGTYG 644
           LH    L++ H DLK  NI LLD+++     KI DFG+A +I  G+E     K I GT  
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGTPA 182
Query: 645 YMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           +++PE        +++D++S GV+    LS
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLS 212

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 96/199 (48%), Gaps = 17/199 (8%)
Query: 482 KLGEGGFGPVYKGRLLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           K+GEG +G VYK +   G+  A+K  RL  +          EI ++ +L+H N+V+    
Sbjct: 9   KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 540 XXXXXXXXXXXXXMPN---KSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRL 596
                        +     K LD  + +   E++      ++++ GIA    Y H     
Sbjct: 69  IHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIA----YCHDR--- 119
Query: 597 RVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ-QGL 655
           RV+HRDLK  N+L++++   KI+DFG+AR F G  ++  T  +V T  Y +P+       
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEVV-TLWYRAPDVLMGSKK 177
Query: 656 FSIKSDVFSFGVLLLETLS 674
           +S   D++S G +  E ++
Sbjct: 178 YSTTIDIWSVGCIFAEMVN 196

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 96/199 (48%), Gaps = 17/199 (8%)
Query: 482 KLGEGGFGPVYKGRLLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           K+GEG +G VYK +   G+  A+K  RL  +          EI ++ +L+H N+V+    
Sbjct: 9   KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 540 XXXXXXXXXXXXXMPN---KSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRL 596
                        +     K LD  + +   E++      ++++ GIA    Y H     
Sbjct: 69  IHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIA----YCHDR--- 119
Query: 597 RVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ-QGL 655
           RV+HRDLK  N+L++++   KI+DFG+AR F G  ++  T  +V T  Y +P+       
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEVV-TLWYRAPDVLMGSKK 177
Query: 656 FSIKSDVFSFGVLLLETLS 674
           +S   D++S G +  E ++
Sbjct: 178 YSTTIDIWSVGCIFAEMVN 196

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 89/197 (45%), Gaps = 12/197 (6%)
Query: 482 KLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
           K+GEG  G V    + + G+ VAVK++  +  Q +E   NE+ ++   QH N+V      
Sbjct: 81  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 541 XXXXXXXXXXXXMPNKSL-DFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                       +   +L D        E  +       +   + Q L  LH      VI
Sbjct: 141 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA-----VCLAVLQALSVLHAQG---VI 192
Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIK 659
           HRD+K+ +ILL  D   K+SDFG       +    + K +VGT  +M+PE   +  +  +
Sbjct: 193 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPE 250
Query: 660 SDVFSFGVLLLETLSSK 676
            D++S G++++E +  +
Sbjct: 251 VDIWSLGIMVIEMVDGE 267

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 130/280 (46%), Gaps = 45/280 (16%)
Query: 482 KLGEGGFGPVYKGR-LLNGQEVAVKRL-SSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +LG G +G V K R + +GQ +AVKR+ ++ + Q Q+    ++ +  +            
Sbjct: 14  ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 73
Query: 540 XXXXXXXXXXXXXMPNKSLDFF---LFD---STKENLLGWGTRVRIIEGIAQGLLYLHQY 593
                        + + SLD F   + D   +  E++LG     +I   I + L +LH  
Sbjct: 74  ALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILG-----KIAVSIVKALEHLH-- 126
Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRI-VGTYGYMSPEYAQ 652
           S+L VIHRD+K SN+L++     K+ DFG++    G  +    K I  G   YM+PE   
Sbjct: 127 SKLSVIHRDVKPSNVLINALGQVKMCDFGIS----GYLVDDVAKDIDAGCKPYMAPERIN 182
Query: 653 QGL----FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP 708
             L    +S+KSD++S G+ ++E               L +L   +D W     ++ +  
Sbjct: 183 PELNQKGYSVKSDIWSLGITMIE---------------LAILRFPYDSW--GTPFQQLKQ 225
Query: 709 TLQNEASYLILNR----YINVGLLCVQEDAADRPTMFEVV 744
            ++  +  L  ++    +++    C+++++ +RPT  E++
Sbjct: 226 VVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELM 265

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG 644
           QG+ YLH     RVIHRDLK  N+ L+ DM+ KI DFG+A     D    + K + GT  
Sbjct: 137 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD--GERKKDLCGTPN 191
Query: 645 YMSPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           Y++PE   +   S + D++S G +L   L  K
Sbjct: 192 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 223

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG 644
           QG+ YLH     RVIHRDLK  N+ L+ DM+ KI DFG+A     D    + K + GT  
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD--GERKKDLCGTPN 207
Query: 645 YMSPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           Y++PE   +   S + D++S G +L   L  K
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 13/206 (6%)
Query: 476 NFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQ---GQEEFKNEIKLIAKLQHR 531
            F     LG+GGFG V   ++   G+  A K+L  +  +   G+    NE +++ K+  R
Sbjct: 185 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSR 244
Query: 532 NLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH 591
            +V                  M    L F ++   +          R +   A+    L 
Sbjct: 245 FVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGF----PEARAVFYAAEICCGLE 300
Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMA-RIFGGDELQSKTKRIVGTYGYMSPEY 650
              R R+++RDLK  NILLD   + +ISD G+A  +  G  ++ +    VGT GYM+PE 
Sbjct: 301 DLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR----VGTVGYMAPEV 356
Query: 651 AQQGLFSIKSDVFSFGVLLLETLSSK 676
            +   ++   D ++ G LL E ++ +
Sbjct: 357 VKNERYTFSPDWWALGCLLYEMIAGQ 382

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 53/84 (63%), Gaps = 6/84 (7%)
Query: 591 HQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEY 650
           H ++R  V++RDLK +NILLD+  + +ISD G+A  F     + K    VGT+GYM+PE 
Sbjct: 307 HMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFS----KKKPHASVGTHGYMAPEV 361
Query: 651 AQQGL-FSIKSDVFSFGVLLLETL 673
            Q+G+ +   +D FS G +L + L
Sbjct: 362 LQKGVAYDSSADWFSLGCMLFKLL 385

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 53/84 (63%), Gaps = 6/84 (7%)
Query: 591 HQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEY 650
           H ++R  V++RDLK +NILLD+  + +ISD G+A  F     + K    VGT+GYM+PE 
Sbjct: 307 HMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFS----KKKPHASVGTHGYMAPEV 361
Query: 651 AQQGL-FSIKSDVFSFGVLLLETL 673
            Q+G+ +   +D FS G +L + L
Sbjct: 362 LQKGVAYDSSADWFSLGCMLFKLL 385

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 53/84 (63%), Gaps = 6/84 (7%)
Query: 591 HQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEY 650
           H ++R  V++RDLK +NILLD+  + +ISD G+A  F     + K    VGT+GYM+PE 
Sbjct: 307 HMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFS----KKKPHASVGTHGYMAPEV 361
Query: 651 AQQGL-FSIKSDVFSFGVLLLETL 673
            Q+G+ +   +D FS G +L + L
Sbjct: 362 LQKGVAYDSSADWFSLGCMLFKLL 385

>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 36/216 (16%)
Query: 483 LGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNE--IKLIAKLQHRNLVRXXXXX 540
           +G G +G VYKG L + + VAVK  S  + Q    F NE  I  +  ++H N+ R     
Sbjct: 21  IGRGRYGAVYKGSL-DERPVAVKVFSFANRQN---FINEKNIYRVPLMEHDNIARFIVGD 76
Query: 541 XXXXXXXXXXXXM-----PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH---- 591
                       +     PN SL  +L   T +    W +  R+   + +GL YLH    
Sbjct: 77  ERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD----WVSSCRLAHSVTRGLAYLHTELP 132
Query: 592 --QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKR------IVGTY 643
              + +  + HRDL + N+L+  D    ISDFG++    G+ L    +        VGT 
Sbjct: 133 RGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTI 192
Query: 644 GYMSPEYAQQGLFSIKS--------DVFSFGVLLLE 671
            YM+PE   +G  +++         D+++ G++  E
Sbjct: 193 RYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWE 227

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 101/230 (43%), Gaps = 37/230 (16%)
Query: 476 NFSTENKLGEGGFGPVYKGRL--LNGQE----VAVKRLSSQSGQGQ-EEFKNEIKLIAKL 528
           N      LGEG FG V K     L G+     VAVK L   +   +  +  +E  ++ ++
Sbjct: 24  NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV 83
Query: 529 QHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTK--------------------- 567
            H ++++                     SL  FL +S K                     
Sbjct: 84  NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 568 ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-I 626
           E  L  G  +     I+QG+ YL   + ++++HRDL A NIL+ +    KISDFG++R +
Sbjct: 144 ERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDV 200
Query: 627 FGGDELQSKTKRIVG--TYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           +  D   S  KR  G     +M+ E     +++ +SDV+SFGVLL E ++
Sbjct: 201 YEED---SYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 53/84 (63%), Gaps = 6/84 (7%)
Query: 591 HQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEY 650
           H ++R  V++RDLK +NILLD+  + +ISD G+A  F     + K    VGT+GYM+PE 
Sbjct: 306 HMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFS----KKKPHASVGTHGYMAPEV 360
Query: 651 AQQGL-FSIKSDVFSFGVLLLETL 673
            Q+G+ +   +D FS G +L + L
Sbjct: 361 LQKGVAYDSSADWFSLGCMLFKLL 384

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 100/230 (43%), Gaps = 37/230 (16%)
Query: 476 NFSTENKLGEGGFGPVYKGRL--LNGQE----VAVKRLSSQSGQGQ-EEFKNEIKLIAKL 528
           N      LGEG FG V K     L G+     VAVK L   +   +  +  +E  ++ ++
Sbjct: 24  NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV 83
Query: 529 QHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTK--------------------- 567
            H ++++                     SL  FL +S K                     
Sbjct: 84  NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 568 ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-I 626
           E  L  G  +     I+QG+ YL + S   ++HRDL A NIL+ +    KISDFG++R +
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAEGRKMKISDFGLSRDV 200
Query: 627 FGGDELQSKTKRIVG--TYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           +  D   S  KR  G     +M+ E     +++ +SDV+SFGVLL E ++
Sbjct: 201 YEED---SXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247

>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound To Ldn- 193189 Length = 305

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 15/202 (7%)
Query: 483 LGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXXXX 542
           +G+G +G V++G L +G+ VAVK  SS+  Q     + EI     L+H N++        
Sbjct: 16  VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFR-ETEIYNTVLLRHDNILGFIASDMT 73
Query: 543 XXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH-----QYSRLR 597
                     + +      L+D  +   L     +R+    A GL +LH        +  
Sbjct: 74  SRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLAHLHVEIFGTQGKPA 133
Query: 598 VIHRDLKASNILLDKDMNPKISDFGMARIF--GGDELQSKTKRIVGTYGYMSPEYAQQGL 655
           + HRD K+ N+L+  ++   I+D G+A +   G D L       VGT  YM+PE   + +
Sbjct: 134 IAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQI 193
Query: 656 F-----SIK-SDVFSFGVLLLE 671
                 S K +D+++FG++L E
Sbjct: 194 RTDCFESYKWTDIWAFGLVLWE 215

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 99/225 (44%), Gaps = 29/225 (12%)
Query: 474 TANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRN 532
            ++F     LG+G FG V K R  L+ +  A+K++   + +      +E+ L+A L H+ 
Sbjct: 5   ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNHQY 63
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFF---------LFDSTK-ENLLGWGTRV-RIIE 581
           +VR                 +  KS  F          L+D    ENL        R+  
Sbjct: 64  VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFR 123
Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG--DELQSKTKRI 639
            I + L Y+H      +IHRDLK  NI +D+  N KI DFG+A+      D L+  ++ +
Sbjct: 124 QILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 640 ----------VGTYGYMSPEYAQ-QGLFSIKSDVFSFGVLLLETL 673
                     +GT  Y++ E     G ++ K D++S G++  E +
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 86/198 (43%), Gaps = 12/198 (6%)
Query: 483 LGEGGFGPVYKGRLLNGQEVAVKRLSSQS----GQGQEEFKNEIKLIAKLQHRNLVRXXX 538
           LG+GGF   ++    + +EV   ++  +S       +E+   EI +   L H+++V    
Sbjct: 47  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 539 XXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRV 598
                            +SL   L    +   L        +  I  G  YLH   R RV
Sbjct: 107 FFEDNDFVFVVLELCRRRSL---LELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRV 160
Query: 599 IHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSI 658
           IHRDLK  N+ L++D+  KI DFG+A     D    + K + GT  Y++PE   +   S 
Sbjct: 161 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD--GERKKVLCGTPNYIAPEVLSKKGHSF 218
Query: 659 KSDVFSFGVLLLETLSSK 676
           + DV+S G ++   L  K
Sbjct: 219 EVDVWSIGCIMYTLLVGK 236

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 13/206 (6%)
Query: 476 NFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQ---GQEEFKNEIKLIAKLQHR 531
            F     LG+GGFG V   ++   G+  A K+L  +  +   G+    NE +++ K+  R
Sbjct: 185 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSR 244
Query: 532 NLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH 591
            +V                  M    L F ++   +          R +   A+    L 
Sbjct: 245 FVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGF----PEARAVFYAAEICCGLE 300
Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMA-RIFGGDELQSKTKRIVGTYGYMSPEY 650
              R R+++RDLK  NILLD   + +ISD G+A  +  G  ++ +    VGT GYM+PE 
Sbjct: 301 DLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR----VGTVGYMAPEV 356
Query: 651 AQQGLFSIKSDVFSFGVLLLETLSSK 676
            +   ++   D ++ G LL E ++ +
Sbjct: 357 VKNERYTFSPDWWALGCLLYEMIAGQ 382

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 86/198 (43%), Gaps = 12/198 (6%)
Query: 483 LGEGGFGPVYKGRLLNGQEVAVKRLSSQS----GQGQEEFKNEIKLIAKLQHRNLVRXXX 538
           LG+GGF   ++    + +EV   ++  +S       +E+   EI +   L H+++V    
Sbjct: 23  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 539 XXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRV 598
                            +SL   L    +   L        +  I  G  YLH   R RV
Sbjct: 83  FFEDNDFVFVVLELCRRRSL---LELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRV 136
Query: 599 IHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSI 658
           IHRDLK  N+ L++D+  KI DFG+A     D    + K + GT  Y++PE   +   S 
Sbjct: 137 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD--GERKKVLCGTPNYIAPEVLSKKGHSF 194
Query: 659 KSDVFSFGVLLLETLSSK 676
           + DV+S G ++   L  K
Sbjct: 195 EVDVWSIGCIMYTLLVGK 212

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 99/225 (44%), Gaps = 29/225 (12%)
Query: 474 TANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRN 532
            ++F     LG+G FG V K R  L+ +  A+K++   + +      +E+ L+A L H+ 
Sbjct: 5   ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNHQY 63
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFF---------LFDSTK-ENLLGWGTRV-RIIE 581
           +VR                 +  KS  F          L+D    ENL        R+  
Sbjct: 64  VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFR 123
Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG--DELQSKTKRI 639
            I + L Y+H      +IHRDLK  NI +D+  N KI DFG+A+      D L+  ++ +
Sbjct: 124 QILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 640 ----------VGTYGYMSPEYAQ-QGLFSIKSDVFSFGVLLLETL 673
                     +GT  Y++ E     G ++ K D++S G++  E +
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225

>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 21/206 (10%)
Query: 483 LGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQG---QEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G+G +G V++G    G+ VAVK  SS+  +    + E  N + L    +H N++     
Sbjct: 16  VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVML----RHENILGFIAS 70
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH-----QYS 594
                        + +      L+D  +   L   + +RI+  IA GL +LH        
Sbjct: 71  DMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQG 130
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIF--GGDELQSKTKRIVGTYGYMSPEYAQ 652
           +  + HRDLK+ NIL+ K+    I+D G+A +     ++L       VGT  YM+PE   
Sbjct: 131 KPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLD 190
Query: 653 QGL------FSIKSDVFSFGVLLLET 672
           + +         + D+++FG++L E 
Sbjct: 191 ETIQVDCFDSYKRVDIWAFGLVLWEV 216

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 22/210 (10%)
Query: 477 FSTENKLGEGGFGPVYKGRLLN-GQEVAVKRL------SSQSGQGQEEFKNEIKLIAKLQ 529
           + T  +LG G F  V K R  + G + A K +      SS+ G  +E+ + E+ ++ ++Q
Sbjct: 13  YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLY 589
           H N++                  +    L  F F + KE+L         ++ I  G+ Y
Sbjct: 73  HPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEA-TEFLKQILNGVYY 129
Query: 590 LHQYSRLRVIHRDLKASNI-LLDKDM---NPKISDFGMA-RIFGGDELQSKTKRIVGTYG 644
           LH    L++ H DLK  NI LLD+++     KI DFG+A +I  G+E     K I GT  
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGTPE 182
Query: 645 YMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           +++PE        +++D++S GV+    LS
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLS 212

>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 15/203 (7%)
Query: 483 LGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXXXX 542
           +G+G +G V++G    G+ VAVK  SS+  +     + E+     L+H N++        
Sbjct: 16  VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFR-ETELYNTVMLRHENILGFIASDMT 73
Query: 543 XXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH-----QYSRLR 597
                     + +      L+D  +   L   + +RI+  IA GL +LH        +  
Sbjct: 74  SRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA 133
Query: 598 VIHRDLKASNILLDKDMNPKISDFGMARIF--GGDELQSKTKRIVGTYGYMSPEYAQQGL 655
           + HRDLK+ NIL+ K+    I+D G+A +     ++L       VGT  YM+PE   + +
Sbjct: 134 IAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETI 193
Query: 656 ------FSIKSDVFSFGVLLLET 672
                    + D+++FG++L E 
Sbjct: 194 QVDCFDSYKRVDIWAFGLVLWEV 216

>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 21/206 (10%)
Query: 483 LGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQG---QEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G+G +G V++G    G+ VAVK  SS+  +    + E  N + L    +H N++     
Sbjct: 45  VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVML----RHENILGFIAS 99
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH-----QYS 594
                        + +      L+D  +   L   + +RI+  IA GL +LH        
Sbjct: 100 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQG 159
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIF--GGDELQSKTKRIVGTYGYMSPEYAQ 652
           +  + HRDLK+ NIL+ K+    I+D G+A +     ++L       VGT  YM+PE   
Sbjct: 160 KPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLD 219
Query: 653 QGL------FSIKSDVFSFGVLLLET 672
           + +         + D+++FG++L E 
Sbjct: 220 ETIQVDCFDSYKRVDIWAFGLVLWEV 245

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 86/198 (43%), Gaps = 12/198 (6%)
Query: 483 LGEGGFGPVYKGRLLNGQEVAVKRLSSQS----GQGQEEFKNEIKLIAKLQHRNLVRXXX 538
           LG+GGF   ++    + +EV   ++  +S       +E+   EI +   L H+++V    
Sbjct: 49  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 539 XXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRV 598
                            +SL   L    +   L        +  I  G  YLH   R RV
Sbjct: 109 FFEDNDFVFVVLELCRRRSL---LELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRV 162
Query: 599 IHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSI 658
           IHRDLK  N+ L++D+  KI DFG+A     D    + K + GT  Y++PE   +   S 
Sbjct: 163 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD--GERKKVLCGTPNYIAPEVLSKKGHSF 220
Query: 659 KSDVFSFGVLLLETLSSK 676
           + DV+S G ++   L  K
Sbjct: 221 EVDVWSIGCIMYTLLVGK 238

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 22/210 (10%)
Query: 477 FSTENKLGEGGFGPVYKGRLLN-GQEVAVKRL------SSQSGQGQEEFKNEIKLIAKLQ 529
           + T  +LG G F  V K R  + G + A K +      SS+ G  +E+ + E+ ++ ++Q
Sbjct: 13  YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLY 589
           H N++                  +    L  F F + KE+L         ++ I  G+ Y
Sbjct: 73  HPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEA-TEFLKQILNGVYY 129
Query: 590 LHQYSRLRVIHRDLKASNI-LLDKDM---NPKISDFGMA-RIFGGDELQSKTKRIVGTYG 644
           LH    L++ H DLK  NI LLD+++     KI DFG+A +I  G+E     K I GT  
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGTPE 182
Query: 645 YMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           +++PE        +++D++S GV+    LS
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLS 212

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 22/210 (10%)
Query: 477 FSTENKLGEGGFGPVYKGRLLN-GQEVAVKRL------SSQSGQGQEEFKNEIKLIAKLQ 529
           + T  +LG G F  V K R  + G + A K +      SS+ G  +E+ + E+ ++ ++Q
Sbjct: 12  YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLY 589
           H N++                  +    L  F F + KE+L         ++ I  G+ Y
Sbjct: 72  HPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEA-TEFLKQILNGVYY 128
Query: 590 LHQYSRLRVIHRDLKASNI-LLDKDMNP---KISDFGMA-RIFGGDELQSKTKRIVGTYG 644
           LH    L++ H DLK  NI LLD+++     KI DFG+A +I  G+E     K I GT  
Sbjct: 129 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGTPE 181
Query: 645 YMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           +++PE        +++D++S GV+    LS
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVITYILLS 211

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 22/210 (10%)
Query: 477 FSTENKLGEGGFGPVYKGRLLN-GQEVAVKRL------SSQSGQGQEEFKNEIKLIAKLQ 529
           + T  +LG G F  V K R  + G + A K +      SS+ G  +E+ + E+ ++ ++Q
Sbjct: 12  YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLY 589
           H N++                  +    L  F F + KE+L         ++ I  G+ Y
Sbjct: 72  HPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEA-TEFLKQILNGVYY 128
Query: 590 LHQYSRLRVIHRDLKASNI-LLDKDM-NP--KISDFGMA-RIFGGDELQSKTKRIVGTYG 644
           LH    L++ H DLK  NI LLD+++  P  KI DFG+A +I  G+E     K I GT  
Sbjct: 129 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGTPE 181
Query: 645 YMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           +++PE        +++D++S GV+    LS
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVITYILLS 211

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 22/210 (10%)
Query: 477 FSTENKLGEGGFGPVYKGRLLN-GQEVAVKRL------SSQSGQGQEEFKNEIKLIAKLQ 529
           + T  +LG G F  V K R  + G + A K +      SS+ G  +E+ + E+ ++ ++Q
Sbjct: 13  YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLY 589
           H N++                  +    L  F F + KE+L         ++ I  G+ Y
Sbjct: 73  HPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEA-TEFLKQILNGVYY 129
Query: 590 LHQYSRLRVIHRDLKASNI-LLDKDM---NPKISDFGMA-RIFGGDELQSKTKRIVGTYG 644
           LH    L++ H DLK  NI LLD+++     KI DFG+A +I  G+E     K I GT  
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGTPE 182
Query: 645 YMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           +++PE        +++D++S GV+    LS
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLS 212

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 116/295 (39%), Gaps = 35/295 (11%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLN-GQE-----VAVKRLSSQSGQGQEE-FKNEIKLIAKL 528
           N      LG G FG V +      G+E     VAVK L S +   ++E   +E+K+++ L
Sbjct: 47  NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 106
Query: 529 -QHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTK-----------ENLLGWGTR 576
            QH N+V                       L  FL   ++            + L     
Sbjct: 107 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDL 166
Query: 577 VRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKT 636
           +     +AQG+ +L   +    IHRD+ A N+LL      KI DFG+AR    D      
Sbjct: 167 LHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 223
Query: 637 KRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDL 696
                   +M+PE     +++++SDV+S+G+LL E  S   N        + +    + L
Sbjct: 224 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP----YPGILVNSKFYKL 279
Query: 697 WKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKT 751
            KD   +++  P    +  Y I+         C   +   RPT  ++ S L  + 
Sbjct: 280 VKD--GYQMAQPAFAPKNIYSIMQA-------CWALEPTHRPTFQQICSFLQEQA 325

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 53/92 (57%), Gaps = 7/92 (7%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARI-FGGDELQSKTKRIVG 641
           I  GL +LH      +++RDLK  NILLDKD + KI+DFGM +    GD   +KT    G
Sbjct: 128 IILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD---AKTNEFCG 181
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLETL 673
           T  Y++PE      ++   D +SFGVLL E L
Sbjct: 182 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEML 213

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 14/202 (6%)
Query: 474 TANFSTENKLGEGGFGPVYKG-RLLNGQEVAVKRLSSQ--SGQGQEEFKNEIKLIAKLQH 530
           T  +    +LG+G F  V +  ++L GQE A   ++++  S +  ++ + E ++   L+H
Sbjct: 10  TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH 69
Query: 531 RNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYL 590
            N+VR                 +    L     D               I+ I + +L+ 
Sbjct: 70  PNIVRLHDSISEEGHHYLIFDLVTGGEL---FEDIVAREYYSEADASHCIQQILEAVLHC 126
Query: 591 HQYSRLRVIHRDLKASNILLD---KDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
           HQ   + V+HR+LK  N+LL    K    K++DFG+A    G+  Q       GT GY+S
Sbjct: 127 HQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE--QQAWFGFAGTPGYLS 181
Query: 648 PEYAQQGLFSIKSDVFSFGVLL 669
           PE  ++  +    D+++ GV+L
Sbjct: 182 PEVLRKDPYGKPVDLWACGVIL 203

>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 57/131 (43%), Gaps = 25/131 (19%)
Query: 567 KENLLGWGTR------------VRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDM 614
           KENL  W  R            + I   IA+ + +LH      ++HRDLK SNI    D 
Sbjct: 145 KENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDD 201
Query: 615 NPKISDFGMARIFGGDELQSKT----------KRIVGTYGYMSPEYAQQGLFSIKSDVFS 664
             K+ DFG+      DE +                VGT  YMSPE      +S K D+FS
Sbjct: 202 VVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFS 261
Query: 665 FGVLLLETLSS 675
            G++L E L S
Sbjct: 262 LGLILFELLYS 272

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 115/277 (41%), Gaps = 30/277 (10%)
Query: 473 ATANFSTENKLGEGGFGPVYKGRLLNGQEV-AVKRL---SSQSGQGQEEFKNEIKLIAKL 528
           A  +F     LG+G FG VY  R  N + + A+K L     +    + + + E+++ + L
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 529 QHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLL 588
           +H N++R                  P  ++   L   +K +     T    I  +A  L 
Sbjct: 66  RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTAT---YITELANALS 122
Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSP 648
           Y H     +VIHRD+K  N+LL      KI+DFG    +      S+   + GT  Y+ P
Sbjct: 123 YCHSK---KVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPP 175
Query: 649 EYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP 708
           E  +  +   K D++S GVL  E L  K   + +NT          D +K     E   P
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-ANTYQ--------DTYKRISRVEFTFP 226
Query: 709 TLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVS 745
               E +  +++R        ++ + + RP + EV+ 
Sbjct: 227 DFVTEGARDLISR-------LLKHNPSQRPMLREVLE 256

>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12 An 193189 Length = 337

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 481 NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
            ++G+G +G V+ G+   G++VAVK   + + +     + EI     ++H N++      
Sbjct: 43  KQIGKGRYGEVWMGKW-RGEKVAVKVFFT-TEEASWFRETEIYQTVLMRHENILGFIAAD 100
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ-----YSR 595
                       + +   +  L+D  K   L   + +++      GL +LH        +
Sbjct: 101 IKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGK 160
Query: 596 LRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD--ELQSKTKRIVGTYGYMSPEYAQQ 653
             + HRDLK+ NIL+ K+    I+D G+A  F  D  E+       VGT  YM PE   +
Sbjct: 161 PAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDE 220
Query: 654 GL------FSIKSDVFSFGVLLLET 672
            L        I +D++SFG++L E 
Sbjct: 221 SLNRNHFQSYIMADMYSFGLILWEV 245

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 74/301 (24%), Positives = 119/301 (39%), Gaps = 47/301 (15%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLN-GQE-----VAVKRLSSQSGQGQEE-FKNEIKLIAKL 528
           N      LG G FG V +      G+E     VAVK L S +   ++E   +E+K+++ L
Sbjct: 47  NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 106
Query: 529 -QHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTK-----------------ENL 570
            QH N+V                       L  FL   ++                  +L
Sbjct: 107 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDL 166
Query: 571 LGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD 630
           L + ++V      AQG+ +L   +    IHRD+ A N+LL      KI DFG+AR    D
Sbjct: 167 LHFSSQV------AQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 217
Query: 631 ELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
                         +M+PE     +++++SDV+S+G+LL E  S   N        + + 
Sbjct: 218 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP----YPGILVN 273
Query: 691 GHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK 750
              + L KD   +++  P    +  Y I+         C   +   RPT  ++ S L  +
Sbjct: 274 SKFYKLVKD--GYQMAQPAFAPKNIYSIMQA-------CWALEPTHRPTFQQICSFLQEQ 324
Query: 751 T 751
Sbjct: 325 A 325

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 114/297 (38%), Gaps = 37/297 (12%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLN-GQE-----VAVKRLSSQSGQGQEE-FKNEIKLIAKL 528
           N      LG G FG V +      G+E     VAVK L S +   ++E   +E+K+++ L
Sbjct: 47  NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 106
Query: 529 -QHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLF-------------DSTKENLLGWG 574
            QH N+V                       L  FL                  E  L   
Sbjct: 107 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSR 166
Query: 575 TRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQS 634
             +     +AQG+ +L   +    IHRD+ A N+LL      KI DFG+AR    D    
Sbjct: 167 DLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 223
Query: 635 KTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAW 694
                     +M+PE     +++++SDV+S+G+LL E  S   N        + +    +
Sbjct: 224 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP----YPGILVNSKFY 279
Query: 695 DLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKT 751
            L KD   +++  P    +  Y I+         C   +   RPT  ++ S L  + 
Sbjct: 280 KLVKD--GYQMAQPAFAPKNIYSIMQA-------CWALEPTHRPTFQQICSFLQEQA 327

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 22/210 (10%)
Query: 477 FSTENKLGEGGFGPVYKGRLLN-GQEVAVKRL------SSQSGQGQEEFKNEIKLIAKLQ 529
           + T  +LG G F  V K R  + G + A K +      SS+ G  +E+ + E+ ++ ++Q
Sbjct: 13  YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLY 589
           H N++                  +    L  F F + KE+L         ++ I  G+ Y
Sbjct: 73  HPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEA-TEFLKQILNGVYY 129
Query: 590 LHQYSRLRVIHRDLKASNI-LLDKDM---NPKISDFGMA-RIFGGDELQSKTKRIVGTYG 644
           LH    L++ H DLK  NI LLD+++     KI DFG+A +I  G+E     K I GT  
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGTPE 182
Query: 645 YMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           +++PE        +++D++S GV+    LS
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLS 212

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 92/216 (42%), Gaps = 16/216 (7%)
Query: 466 SLASVSAATANFSTENKLGEGGFGPVYKGR-----LLNGQEVAVKRLSSQSGQGQEEFKN 520
           ++ S   A  +F     LG+G FG VY  R      +   +V  K    ++G  + + + 
Sbjct: 2   AMGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRR 60
Query: 521 EIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRII 580
           E+++ + L+H N++R                  P  ++   L   +K +     T    I
Sbjct: 61  EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT---YI 117
Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIV 640
             +A  L Y H     RVIHRD+K  N+LL      KI+DFG    +      S+   + 
Sbjct: 118 TELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALC 170
Query: 641 GTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           GT  Y+ PE  +  +   K D++S GVL  E L  K
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206

>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 12/103 (11%)
Query: 577 VRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKT 636
           + ++  ++ G+ YL + +    +HRDL A N+LL      KISDFG+++    DE   K 
Sbjct: 114 IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKA 170
Query: 637 KRIVGTYG-----YMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           +    T+G     + +PE      FS KSDV+SFGVL+ E  S
Sbjct: 171 Q----THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 482 KLGEGGFGPVYKG--RLLNGQ-EVAVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNLVRXX 537
           +LG G FG V +G  R+   Q +VA+K L   + +   EE   E +++ +L +  +VR  
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 538 XXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLR 597
                               L  FL    +E  +       ++  ++ G+ YL + +   
Sbjct: 403 GVCQAEALMLVMEMAG-GGPLHKFLVGKREE--IPVSNVAELLHQVSMGMKYLEEKN--- 456
Query: 598 VIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY--GYMSPEYAQQGL 655
            +HR+L A N+LL      KISDFG+++  G D+    T R  G +   + +PE      
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSKALGADD-SYYTARSAGKWPLKWYAPECINFRK 515
Query: 656 FSIKSDVFSFGVLLLETLS 674
           FS +SDV+S+GV + E LS
Sbjct: 516 FSSRSDVWSYGVTMWEALS 534

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 91/215 (42%), Gaps = 16/215 (7%)
Query: 467 LASVSAATANFSTENKLGEGGFGPVYKGR-----LLNGQEVAVKRLSSQSGQGQEEFKNE 521
           L S   A  +F     LG+G FG VY  R      +   +V  K    ++G  + + + E
Sbjct: 3   LGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRRE 61
Query: 522 IKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIE 581
           +++ + L+H N++R                  P  ++   L   +K +     T    I 
Sbjct: 62  VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT---YIT 118
Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            +A  L Y H     RVIHRD+K  N+LL      KI+DFG    +      S+   + G
Sbjct: 119 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLCG 171
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           T  Y+ PE  +  +   K D++S GVL  E L  K
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 22/210 (10%)
Query: 477 FSTENKLGEGGFGPVYKGRLLN-GQEVAVKRL------SSQSGQGQEEFKNEIKLIAKLQ 529
           + T  +LG G F  V K R  + G + A K +      SS+ G  +E+ + E+ ++ ++Q
Sbjct: 13  YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLY 589
           H N++                  +    L  F F + KE+L         ++ I  G+ Y
Sbjct: 73  HPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEA-TEFLKQILNGVYY 129
Query: 590 LHQYSRLRVIHRDLKASNI-LLDKDM---NPKISDFGMA-RIFGGDELQSKTKRIVGTYG 644
           LH    L++ H DLK  NI LLD+++     KI DFG+A +I  G+E     K I GT  
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGTPE 182
Query: 645 YMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           +++PE        +++D++S GV+    LS
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLS 212

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 35/210 (16%)
Query: 476 NFSTENKLGEGGFGPVYKG-RLLNGQEVAVKRLSSQ--SGQGQEEFKNEIKLIAKLQHRN 532
           N+  + +LG+G F  V +      G E A K ++++  S +  ++ + E ++  KLQH N
Sbjct: 6   NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN 65
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVR----------IIEG 582
           +VR                 +  +S  + +FD      L      R           I+ 
Sbjct: 66  IVRLHDS-------------IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ 112
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLD---KDMNPKISDFGMARIFGGDELQSKTKRI 639
           I + + Y H      ++HR+LK  N+LL    K    K++DFG+A      E        
Sbjct: 113 ILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG---F 166
Query: 640 VGTYGYMSPEYAQQGLFSIKSDVFSFGVLL 669
            GT GY+SPE  ++  +S   D+++ GV+L
Sbjct: 167 AGTPGYLSPEVLKKDPYSKPVDIWACGVIL 196

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 22/210 (10%)
Query: 477 FSTENKLGEGGFGPVYKGRLLN-GQEVAVKRL------SSQSGQGQEEFKNEIKLIAKLQ 529
           + T  +LG G F  V K R  + G + A K +      SS+ G  +E+ + E+ ++ ++Q
Sbjct: 13  YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLY 589
           H N++                  +    L  F F + KE+L         ++ I  G+ Y
Sbjct: 73  HPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEA-TEFLKQILNGVYY 129
Query: 590 LHQYSRLRVIHRDLKASNI-LLDKDM---NPKISDFGMA-RIFGGDELQSKTKRIVGTYG 644
           LH    L++ H DLK  NI LLD+++     KI DFG+A +I  G+E     K I GT  
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGTPE 182
Query: 645 YMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           +++PE        +++D++S GV+    LS
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLS 212

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 22/210 (10%)
Query: 477 FSTENKLGEGGFGPVYKGRLLN-GQEVAVKRL------SSQSGQGQEEFKNEIKLIAKLQ 529
           + T  +LG G F  V K R  + G + A K +      SS+ G  +E+ + E+ ++ ++Q
Sbjct: 13  YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLY 589
           H N++                  +    L  F F + KE+L         ++ I  G+ Y
Sbjct: 73  HPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEA-TEFLKQILNGVYY 129
Query: 590 LHQYSRLRVIHRDLKASNI-LLDKDM---NPKISDFGMA-RIFGGDELQSKTKRIVGTYG 644
           LH    L++ H DLK  NI LLD+++     KI DFG+A +I  G+E     K I GT  
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGTPE 182
Query: 645 YMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           +++PE        +++D++S GV+    LS
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLS 212

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 53/92 (57%), Gaps = 7/92 (7%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARI-FGGDELQSKTKRIVG 641
           I  GL +LH      +++RDLK  NILLDKD + KI+DFGM +    GD   +KT    G
Sbjct: 127 IILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD---AKTNXFCG 180
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLETL 673
           T  Y++PE      ++   D +SFGVLL E L
Sbjct: 181 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEML 212

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 22/210 (10%)
Query: 477 FSTENKLGEGGFGPVYKGRLLN-GQEVAVKRL------SSQSGQGQEEFKNEIKLIAKLQ 529
           + T  +LG G F  V K R  + G + A K +      SS+ G  +E+ + E+ ++ ++Q
Sbjct: 13  YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLY 589
           H N++                  +    L  F F + KE+L         ++ I  G+ Y
Sbjct: 73  HPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEA-TEFLKQILNGVYY 129
Query: 590 LHQYSRLRVIHRDLKASNI-LLDKDM---NPKISDFGMA-RIFGGDELQSKTKRIVGTYG 644
           LH    L++ H DLK  NI LLD+++     KI DFG+A +I  G+E     K I GT  
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGTPE 182
Query: 645 YMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           +++PE        +++D++S GV+    LS
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLS 212

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDK 612
           +P K  D +    T E+L+ +  +V      A+G+ +L   +  + IHRDL A NILL +
Sbjct: 133 VPYKPEDLYKDFLTLEHLIXYSFQV------AKGMEFL---ASRKXIHRDLAARNILLSE 183
Query: 613 DMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLET 672
               KI DFG+AR    D    +         +M+PE     +++I+SDV+SFGVLL E 
Sbjct: 184 KNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
Query: 673 LS 674
            S
Sbjct: 244 FS 245

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 59.7 bits (143), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 22/210 (10%)
Query: 477 FSTENKLGEGGFGPVYKGRLLN-GQEVAVKRL------SSQSGQGQEEFKNEIKLIAKLQ 529
           + T  +LG G F  V K R  + G + A K +      SS+ G  +E+ + E+ ++ ++Q
Sbjct: 13  YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLY 589
           H N++                  +    L  F F + KE+L         ++ I  G+ Y
Sbjct: 73  HPNVITLHEVYENKTDVILIGELVAGGEL--FDFLAEKESLTEEEA-TEFLKQILNGVYY 129
Query: 590 LHQYSRLRVIHRDLKASNI-LLDKDM-NP--KISDFGMA-RIFGGDELQSKTKRIVGTYG 644
           LH    L++ H DLK  NI LLD+++  P  KI DFG+A +I  G+E     K I GT  
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGTPE 182
Query: 645 YMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           +++PE        +++D++S GV+    LS
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLS 212

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 59.7 bits (143), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 16/209 (7%)
Query: 473 ATANFSTENKLGEGGFGPVYKGR-----LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAK 527
           A  +F     LG+G FG VY  R      +   +V  K    ++G  + + + E+++ + 
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSH 64
Query: 528 LQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGL 587
           L+H N++R                  P  ++   L   +K +     T    I  +A  L
Sbjct: 65  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT---YITELANAL 121
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
            Y H     RVIHRD+K  N+LL      KI+DFG    +      S+   + GT  Y+ 
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTELCGTLDYLP 174
Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           PE  +  +   K D++S GVL  E L  K
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 59.7 bits (143), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 9/214 (4%)
Query: 483 LGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNLVRXXXXX 540
           +GEG +G V      +    VA+K++S    Q   +    EI+++ + +H N++      
Sbjct: 51  IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDIL 110
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIH 600
                       +    ++  L+   K   L        +  I +GL Y+H  +   V+H
Sbjct: 111 RASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSAN---VLH 167
Query: 601 RDLKASNILLDKDMNPKISDFGMARIFGGDELQSK-TKRIVGTYGYMSPEYAQQGLFSIK 659
           RDLK SN+L++   + KI DFG+ARI   +   +      V T  Y +PE         K
Sbjct: 168 RDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTK 227
Query: 660 S-DVFSFGVLLLETLSSKRNTDFSNTNSLTLLGH 692
           S D++S G +L E LS++    F   + L  L H
Sbjct: 228 SIDIWSVGCILAEMLSNR--PIFPGKHYLDQLNH 259

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 59.7 bits (143), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 12/103 (11%)
Query: 577 VRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKT 636
           + ++  ++ G+ YL + +    +HRDL A N+LL      KISDFG+++    DE   K 
Sbjct: 110 IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 166
Query: 637 KRIVGTYG-----YMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           +    T+G     + +PE      FS KSDV+SFGVL+ E  S
Sbjct: 167 Q----THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 205

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 59.7 bits (143), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 35/210 (16%)
Query: 476 NFSTENKLGEGGFGPVYKG-RLLNGQEVAVKRLSSQ--SGQGQEEFKNEIKLIAKLQHRN 532
           N+  + +LG+G F  V +      G E A K ++++  S +  ++ + E ++  KLQH N
Sbjct: 7   NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN 66
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVR----------IIEG 582
           +VR                 +  +S  + +FD      L      R           I+ 
Sbjct: 67  IVRLHDS-------------IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ 113
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLD---KDMNPKISDFGMARIFGGDELQSKTKRI 639
           I + + Y H      ++HR+LK  N+LL    K    K++DFG+A      E        
Sbjct: 114 ILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG---F 167
Query: 640 VGTYGYMSPEYAQQGLFSIKSDVFSFGVLL 669
            GT GY+SPE  ++  +S   D+++ GV+L
Sbjct: 168 AGTPGYLSPEVLKKDPYSKPVDIWACGVIL 197

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 59.7 bits (143), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 22/210 (10%)
Query: 477 FSTENKLGEGGFGPVYKGRLLN-GQEVAVKRL------SSQSGQGQEEFKNEIKLIAKLQ 529
           + T  +LG G F  V K R  + G + A K +      SS+ G  +E+ + E+ ++ ++Q
Sbjct: 13  YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLY 589
           H N++                  +    L  F F + KE+L         ++ I  G+ Y
Sbjct: 73  HPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEA-TEFLKQILNGVYY 129
Query: 590 LHQYSRLRVIHRDLKASNI-LLDKDM---NPKISDFGMA-RIFGGDELQSKTKRIVGTYG 644
           LH    L++ H DLK  NI LLD+++     KI DFG+A +I  G+E     K I GT  
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGTPE 182
Query: 645 YMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           +++PE        +++D++S GV+    LS
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLS 212

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 12/103 (11%)
Query: 577 VRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKT 636
           + ++  ++ G+ YL + +    +HRDL A N+LL      KISDFG+++    DE   K 
Sbjct: 130 IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 186
Query: 637 KRIVGTYG-----YMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           +    T+G     + +PE      FS KSDV+SFGVL+ E  S
Sbjct: 187 Q----THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 12/103 (11%)
Query: 577 VRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKT 636
           + ++  ++ G+ YL + +    +HRDL A N+LL      KISDFG+++    DE   K 
Sbjct: 130 IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 186
Query: 637 KRIVGTYG-----YMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           +    T+G     + +PE      FS KSDV+SFGVL+ E  S
Sbjct: 187 Q----THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 12/103 (11%)
Query: 577 VRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKT 636
           + ++  ++ G+ YL + +    +HRDL A N+LL      KISDFG+++    DE   K 
Sbjct: 114 IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 170
Query: 637 KRIVGTYG-----YMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           +    T+G     + +PE      FS KSDV+SFGVL+ E  S
Sbjct: 171 Q----THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ YL   +  + IHRDL A N+L+ +D   KI+DFG+AR     +   KT      
Sbjct: 144 VARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 200
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++ +SDV+SFGVLL E  +
Sbjct: 201 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 12/103 (11%)
Query: 577 VRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKT 636
           + ++  ++ G+ YL + +    +HRDL A N+LL      KISDFG+++    DE   K 
Sbjct: 108 IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 164
Query: 637 KRIVGTYG-----YMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           +    T+G     + +PE      FS KSDV+SFGVL+ E  S
Sbjct: 165 Q----THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 203

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ +L   +  + IHRDL A NILL +    KI DFG+AR    D    +       
Sbjct: 157 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++I+SDV+SFGVLL E  S
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ YL   +  + IHRDL A N+L+ +D   KI+DFG+AR     +   KT      
Sbjct: 159 VARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLP 215
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++ +SDV+SFGVLL E  +
Sbjct: 216 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 16/209 (7%)
Query: 473 ATANFSTENKLGEGGFGPVYKGR-----LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAK 527
           A  +F     LG+G FG VY  R      +   +V  K    ++G  + + + E+++ + 
Sbjct: 8   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSH 66
Query: 528 LQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGL 587
           L+H N++R                  P  ++   L   +K +     T    I  +A  L
Sbjct: 67  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT---YITELANAL 123
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
            Y H     RVIHRD+K  N+LL      KI+DFG    +      S+   + GT  Y+ 
Sbjct: 124 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLP 176
Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           PE  +  +   K D++S GVL  E L  K
Sbjct: 177 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 22/210 (10%)
Query: 477 FSTENKLGEGGFGPVYKGRLLN-GQEVAVKRL------SSQSGQGQEEFKNEIKLIAKLQ 529
           + T  +LG G F  V K R  + G + A K +      SS+ G  +E+ + E+ ++ ++Q
Sbjct: 13  YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 530 HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLY 589
           H N++                  +    L  F F + KE+L         ++ I  G+ Y
Sbjct: 73  HPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEA-TEFLKQILNGVYY 129
Query: 590 LHQYSRLRVIHRDLKASNI-LLDKDM---NPKISDFGMA-RIFGGDELQSKTKRIVGTYG 644
           LH    L++ H DLK  NI LLD+++     KI DFG+A +I  G+E     K I GT  
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGTPE 182
Query: 645 YMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           +++PE        +++D++S GV+    LS
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLS 212

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 12/103 (11%)
Query: 577 VRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKT 636
           + ++  ++ G+ YL + +    +HRDL A N+LL      KISDFG+++    DE   K 
Sbjct: 128 IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 184
Query: 637 KRIVGTYG-----YMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           +    T+G     + +PE      FS KSDV+SFGVL+ E  S
Sbjct: 185 Q----THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 223

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 88/209 (42%), Gaps = 16/209 (7%)
Query: 473 ATANFSTENKLGEGGFGPVYKGR-----LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAK 527
           A  +F     LG+G FG VY  R      +   +V  K    ++G  + + + E+++ + 
Sbjct: 11  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSH 69
Query: 528 LQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGL 587
           L+H N++R                  P   +   L   +K +     T    I  +A  L
Sbjct: 70  LRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTAT---YITELANAL 126
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
            Y H     RVIHRD+K  N+LL      KI+DFG    +      S+   + GT  Y+ 
Sbjct: 127 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLP 179
Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           PE  +  +   K D++S GVL  E L  K
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 12/103 (11%)
Query: 577 VRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKT 636
           + ++  ++ G+ YL + +    +HRDL A N+LL      KISDFG+++    DE   K 
Sbjct: 120 IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 176
Query: 637 KRIVGTYG-----YMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           +    T+G     + +PE      FS KSDV+SFGVL+ E  S
Sbjct: 177 Q----THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 215

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ +L   +  + IHRDL A NILL +    KI DFG+AR    D    +       
Sbjct: 148 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 204
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++I+SDV+SFGVLL E  S
Sbjct: 205 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ YL   +  + IHRDL A N+L+ +D   KI+DFG+AR     +   KT      
Sbjct: 151 VARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 207
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++ +SDV+SFGVLL E  +
Sbjct: 208 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 90/202 (44%), Gaps = 14/202 (6%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQ-EVAVKRL--SSQSGQGQE-EFKNEIKLIAKLQHR 531
           +F     LG+G FG VY  R       VA+K L  S    +G E + + EI++ A L H 
Sbjct: 24  DFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHP 83
Query: 532 NLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH 591
           N++R                  P   L   L  S   +     T   I+E +A  L+Y H
Sbjct: 84  NILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTAT---IMEELADALMYCH 140
Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYA 651
                +VIHRD+K  N+LL      KI+DFG +       L+ KT  + GT  Y+ PE  
Sbjct: 141 GK---KVIHRDIKPENLLLGLKGELKIADFGWS--VHAPSLRRKT--MCGTLDYLPPEMI 193
Query: 652 QQGLFSIKSDVFSFGVLLLETL 673
           +  + + K D++  GVL  E L
Sbjct: 194 EGRMHNEKVDLWCIGVLCYELL 215

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 35/210 (16%)
Query: 476 NFSTENKLGEGGFGPVYKG-RLLNGQEVAVKRLSSQ--SGQGQEEFKNEIKLIAKLQHRN 532
           N+  + +LG+G F  V +      G E A K ++++  S +  ++ + E ++  KLQH N
Sbjct: 7   NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN 66
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVR----------IIEG 582
           +VR                 +  +S  + +FD      L      R           I+ 
Sbjct: 67  IVRLHDS-------------IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ 113
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLD---KDMNPKISDFGMARIFGGDELQSKTKRI 639
           I + + Y H      ++HR+LK  N+LL    K    K++DFG+A      E        
Sbjct: 114 ILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG---F 167
Query: 640 VGTYGYMSPEYAQQGLFSIKSDVFSFGVLL 669
            GT GY+SPE  ++  +S   D+++ GV+L
Sbjct: 168 AGTPGYLSPEVLKKDPYSKPVDIWACGVIL 197

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 59.3 bits (142), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ +L   +  + IHRDL A NILL +    KI DFG+AR    D    +       
Sbjct: 157 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++I+SDV+SFGVLL E  S
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 59.3 bits (142), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ +L   +  + IHRDL A NILL +    KI DFG+AR    D    +       
Sbjct: 148 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 204
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++I+SDV+SFGVLL E  S
Sbjct: 205 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 59.3 bits (142), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 16/209 (7%)
Query: 473 ATANFSTENKLGEGGFGPVYKGR-----LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAK 527
           A  +F     LG+G FG VY  R      +   +V  K    ++G  + + + E+++ + 
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSH 64
Query: 528 LQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGL 587
           L+H N++R                  P  ++   L   +K +     T    I  +A  L
Sbjct: 65  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT---YITELANAL 121
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
            Y H     RVIHRD+K  N+LL      KI+DFG    +      S+   + GT  Y+ 
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLP 174
Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           PE  +  +   K D++S GVL  E L  K
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 59.3 bits (142), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 16/209 (7%)
Query: 473 ATANFSTENKLGEGGFGPVYKGR-----LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAK 527
           A  +F     LG+G FG VY  R      +   +V  K    ++G  + + + E+++ + 
Sbjct: 7   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSH 65
Query: 528 LQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGL 587
           L+H N++R                  P  ++   L   +K +     T    I  +A  L
Sbjct: 66  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT---YITELANAL 122
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
            Y H     RVIHRD+K  N+LL      KI+DFG    +      S+   + GT  Y+ 
Sbjct: 123 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDTLCGTLDYLP 175
Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           PE  +  +   K D++S GVL  E L  K
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 59.3 bits (142), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ YL   +  + IHRDL A N+L+ +D   KI+DFG+AR     +   KT      
Sbjct: 148 VARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 204
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++ +SDV+SFGVLL E  +
Sbjct: 205 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 59.3 bits (142), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ YL   +  + IHRDL A N+L+ +D   KI+DFG+AR     +   KT      
Sbjct: 152 VARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 208
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++ +SDV+SFGVLL E  +
Sbjct: 209 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 59.3 bits (142), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ YL   +  + IHRDL A N+L+ +D   KI+DFG+AR     +   KT      
Sbjct: 159 VARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 215
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++ +SDV+SFGVLL E  +
Sbjct: 216 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 59.3 bits (142), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 88/209 (42%), Gaps = 16/209 (7%)
Query: 473 ATANFSTENKLGEGGFGPVYKGR-----LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAK 527
           A  +F     LG+G FG VY  R      +   +V  K    ++G  + + + E+++ + 
Sbjct: 11  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSH 69
Query: 528 LQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGL 587
           L+H N++R                  P   +   L   +K +     T    I  +A  L
Sbjct: 70  LRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTAT---YITELANAL 126
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
            Y H     RVIHRD+K  N+LL      KI+DFG    +      S+   + GT  Y+ 
Sbjct: 127 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLXGTLDYLP 179
Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           PE  +  +   K D++S GVL  E L  K
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 16/209 (7%)
Query: 473 ATANFSTENKLGEGGFGPVYKGR-----LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAK 527
           A  +F     LG+G FG VY  R      +   +V  K    ++G  + + + E+++ + 
Sbjct: 5   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSH 63
Query: 528 LQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGL 587
           L+H N++R                  P  ++   L   +K +     T    I  +A  L
Sbjct: 64  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT---YITELANAL 120
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
            Y H     RVIHRD+K  N+LL      KI+DFG    +      S+   + GT  Y+ 
Sbjct: 121 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLP 173
Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           PE  +  +   K D++S GVL  E L  K
Sbjct: 174 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 202

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 16/209 (7%)
Query: 473 ATANFSTENKLGEGGFGPVYKGR-----LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAK 527
           A  +F     LG+G FG VY  R      +   +V  K    ++G  + + + E+++ + 
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSH 64
Query: 528 LQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGL 587
           L+H N++R                  P  ++   L   +K +     T    I  +A  L
Sbjct: 65  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT---YITELANAL 121
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
            Y H     RVIHRD+K  N+LL      KI+DFG    +      S+   + GT  Y+ 
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLP 174
Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           PE  +  +   K D++S GVL  E L  K
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ YL   +  + IHRDL A N+L+ +D   KI+DFG+AR     +   KT      
Sbjct: 159 VARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 215
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++ +SDV+SFGVLL E  +
Sbjct: 216 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 16/209 (7%)
Query: 473 ATANFSTENKLGEGGFGPVYKGR-----LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAK 527
           A  +F     LG+G FG VY  R      +   +V  K    ++G  + + + E+++ + 
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSH 64
Query: 528 LQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGL 587
           L+H N++R                  P  ++   L   +K +     T    I  +A  L
Sbjct: 65  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT---YITELANAL 121
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
            Y H     RVIHRD+K  N+LL      KI+DFG    +      S+   + GT  Y+ 
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLP 174
Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           PE  +  +   K D++S GVL  E L  K
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ YL   +  + IHRDL A N+L+ +D   KI+DFG+AR     +   KT      
Sbjct: 159 VARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 215
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++ +SDV+SFGVLL E  +
Sbjct: 216 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 16/209 (7%)
Query: 473 ATANFSTENKLGEGGFGPVYKGR-----LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAK 527
           A  +F     LG+G FG VY  R      +   +V  K    ++G  + + + E+++ + 
Sbjct: 9   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSH 67
Query: 528 LQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGL 587
           L+H N++R                  P  ++   L   +K +     T    I  +A  L
Sbjct: 68  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT---YITELANAL 124
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
            Y H     RVIHRD+K  N+LL      KI+DFG    +      S+   + GT  Y+ 
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLP 177
Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           PE  +  +   K D++S GVL  E L  K
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 16/209 (7%)
Query: 473 ATANFSTENKLGEGGFGPVYKGR-----LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAK 527
           A  +F     LG+G FG VY  R      +   +V  K    ++G  + + + E+++ + 
Sbjct: 7   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSH 65
Query: 528 LQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGL 587
           L+H N++R                  P  ++   L   +K +     T    I  +A  L
Sbjct: 66  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT---YITELANAL 122
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
            Y H     RVIHRD+K  N+LL      KI+DFG    +      S+   + GT  Y+ 
Sbjct: 123 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLP 175
Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           PE  +  +   K D++S GVL  E L  K
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 16/209 (7%)
Query: 473 ATANFSTENKLGEGGFGPVYKGR-----LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAK 527
           A  +F     LG+G FG VY  R      +   +V  K    ++G  + + + E+++ + 
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSH 64
Query: 528 LQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGL 587
           L+H N++R                  P  ++   L   +K +     T    I  +A  L
Sbjct: 65  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT---YITELANAL 121
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
            Y H     RVIHRD+K  N+LL      KI+DFG    +      S+   + GT  Y+ 
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLP 174
Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           PE  +  +   K D++S GVL  E L  K
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 16/209 (7%)
Query: 473 ATANFSTENKLGEGGFGPVYKGR-----LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAK 527
           A  +F     LG+G FG VY  R      +   +V  K    ++G  + + + E+++ + 
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSH 64
Query: 528 LQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGL 587
           L+H N++R                  P  ++   L   +K +     T    I  +A  L
Sbjct: 65  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT---YITELANAL 121
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
            Y H     RVIHRD+K  N+LL      KI+DFG    +      S+   + GT  Y+ 
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLP 174
Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           PE  +  +   K D++S GVL  E L  K
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 16/209 (7%)
Query: 473 ATANFSTENKLGEGGFGPVYKGR-----LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAK 527
           A  +F     LG+G FG VY  R      +   +V  K    ++G  + + + E+++ + 
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSH 64
Query: 528 LQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGL 587
           L+H N++R                  P  ++   L   +K +     T    I  +A  L
Sbjct: 65  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT---YITELANAL 121
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
            Y H     RVIHRD+K  N+LL      KI+DFG    +      S+   + GT  Y+ 
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTXLCGTLDYLP 174
Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           PE  +  +   K D++S GVL  E L  K
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 16/209 (7%)
Query: 473 ATANFSTENKLGEGGFGPVYKGR-----LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAK 527
           A  +F     LG+G FG VY  R      +   +V  K    ++G  + + + E+++ + 
Sbjct: 11  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSH 69
Query: 528 LQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGL 587
           L+H N++R                  P  ++   L   +K +     T    I  +A  L
Sbjct: 70  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT---YITELANAL 126
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
            Y H     RVIHRD+K  N+LL      KI+DFG    +      S+   + GT  Y+ 
Sbjct: 127 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLP 179
Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           PE  +  +   K D++S GVL  E L  K
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 16/209 (7%)
Query: 473 ATANFSTENKLGEGGFGPVYKGR-----LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAK 527
           A  +F     LG+G FG VY  R      +   +V  K    ++G  + + + E+++ + 
Sbjct: 3   ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGV-EHQLRREVEIQSH 61
Query: 528 LQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGL 587
           L+H N++R                  P  ++   L   +K +     T    I  +A  L
Sbjct: 62  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT---YITELANAL 118
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
            Y H     RVIHRD+K  N+LL      KI+DFG    +      S+   + GT  Y+ 
Sbjct: 119 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLP 171
Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           PE  +  +   K D++S GVL  E L  K
Sbjct: 172 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 200

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 16/209 (7%)
Query: 473 ATANFSTENKLGEGGFGPVYKGR-----LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAK 527
           A  +F     LG+G FG VY  R      +   +V  K    ++G  + + + E+++ + 
Sbjct: 9   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSH 67
Query: 528 LQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGL 587
           L+H N++R                  P  ++   L   +K +     T    I  +A  L
Sbjct: 68  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT---YITELANAL 124
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
            Y H     RVIHRD+K  N+LL      KI+DFG    +      S+   + GT  Y+ 
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLP 177
Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           PE  +  +   K D++S GVL  E L  K
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 12/103 (11%)
Query: 577 VRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKT 636
           + ++  ++ G+ YL + +    +HRDL A N+LL      KISDFG+++    DE   K 
Sbjct: 472 IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 528
Query: 637 KRIVGTYG-----YMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           +    T+G     + +PE      FS KSDV+SFGVL+ E  S
Sbjct: 529 Q----THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 12/103 (11%)
Query: 577 VRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKT 636
           + ++  ++ G+ YL + +    +HRDL A N+LL      KISDFG+++    DE   K 
Sbjct: 473 IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 529
Query: 637 KRIVGTYG-----YMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           +    T+G     + +PE      FS KSDV+SFGVL+ E  S
Sbjct: 530 Q----THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 35/221 (15%)
Query: 465 FSLASVSAATANFSTENKLGEGGFGPVYKG-RLLNGQEVAVKRLSSQ--SGQGQEEFKNE 521
           F + + +  + N+  + +LG+G F  V +      G E A K ++++  S +  ++ + E
Sbjct: 19  FMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLERE 78
Query: 522 IKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVR--- 578
            ++  KLQH N+VR                 +  +S  + +FD      L      R   
Sbjct: 79  ARICRKLQHPNIVRLHDS-------------IQEESFHYLVFDLVTGGELFEDIVAREFY 125
Query: 579 -------IIEGIAQGLLYLHQYSRLRVIHRDLKASNILLD---KDMNPKISDFGMARIFG 628
                   I+ I + + Y H      ++HR+LK  N+LL    K    K++DFG+A    
Sbjct: 126 SEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 182
Query: 629 GDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLL 669
             E         GT GY+SPE  ++  +S   D+++ GV+L
Sbjct: 183 DSEAWHG---FAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 220

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 99/225 (44%), Gaps = 29/225 (12%)
Query: 474 TANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRN 532
            ++F     LG+G FG V K R  L+ +  A+K++   + +      +E+ L+A L H+ 
Sbjct: 5   ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVXLLASLNHQY 63
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFF---------LFDSTK-ENLLGWGTRV-RIIE 581
           +VR                 +  KS  F          L+D    ENL        R+  
Sbjct: 64  VVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFR 123
Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG--DELQSKTKRI 639
            I + L Y+H      +IHR+LK  NI +D+  N KI DFG+A+      D L+  ++ +
Sbjct: 124 QILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 640 ----------VGTYGYMSPEYAQ-QGLFSIKSDVFSFGVLLLETL 673
                     +GT  Y++ E     G ++ K D +S G++  E +
Sbjct: 181 PGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ YL   +  + IHRDL A N+L+ +D   KI+DFG+AR     +   KT      
Sbjct: 200 VARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 256
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++ +SDV+SFGVLL E  +
Sbjct: 257 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ +L   +  + IHRDL A NILL +    KI DFG+AR    D    +       
Sbjct: 157 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLP 213
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++I+SDV+SFGVLL E  S
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 16/209 (7%)
Query: 473 ATANFSTENKLGEGGFGPVYKGR-----LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAK 527
           A  +F     LG+G FG VY  R      +   +V  K    ++G  + + + E+++ + 
Sbjct: 11  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSH 69
Query: 528 LQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGL 587
           L+H N++R                  P  ++   L   +K +     T    I  +A  L
Sbjct: 70  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT---YITELANAL 126
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
            Y H     RVIHRD+K  N+LL      KI+DFG    +      S+   + GT  Y+ 
Sbjct: 127 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLP 179
Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           PE  +  +   K D++S GVL  E L  K
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 16/209 (7%)
Query: 473 ATANFSTENKLGEGGFGPVYKGR-----LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAK 527
           A  +F     LG+G FG VY  R      +   +V  K    ++G  + + + E+++ + 
Sbjct: 10  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSH 68
Query: 528 LQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGL 587
           L+H N++R                  P  ++   L   +K +     T    I  +A  L
Sbjct: 69  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT---YITELANAL 125
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
            Y H     RVIHRD+K  N+LL      KI+DFG    +      S+   + GT  Y+ 
Sbjct: 126 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLP 178
Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           PE  +  +   K D++S GVL  E L  K
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 207

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 16/209 (7%)
Query: 473 ATANFSTENKLGEGGFGPVYKGR-----LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAK 527
           A  +F     LG+G FG VY  R      +   +V  K    ++G  + + + E+++ + 
Sbjct: 9   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSH 67
Query: 528 LQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGL 587
           L+H N++R                  P  ++   L   +K +     T    I  +A  L
Sbjct: 68  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT---YITELANAL 124
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
            Y H     RVIHRD+K  N+LL      KI+DFG    +      S+   + GT  Y+ 
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLP 177
Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           PE  +  +   K D++S GVL  E L  K
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 5/105 (4%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           I+ GL +LH+     +I+RDLK  N++LD + + KI+DFGM +    D +   T+   GT
Sbjct: 129 ISIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGV--TTREFCGT 183
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSL 687
             Y++PE      +    D +++GVLL E L+ +   D  + + L
Sbjct: 184 PDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDEL 228

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 16/209 (7%)
Query: 473 ATANFSTENKLGEGGFGPVYKGR-----LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAK 527
           A  +F     LG+G FG VY  R      +   +V  K    ++G  + + + E+++ + 
Sbjct: 23  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSH 81
Query: 528 LQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGL 587
           L+H N++R                  P  ++   L   +K +     T    I  +A  L
Sbjct: 82  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT---YITELANAL 138
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
            Y H     RVIHRD+K  N+LL      KI+DFG    +      S+   + GT  Y+ 
Sbjct: 139 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLP 191
Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           PE  +  +   K D++S GVL  E L  K
Sbjct: 192 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 30/167 (17%)
Query: 516 EEFKNEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGT 575
           E+   EI ++ KL H N+V+                  PN+   + +F+   +  +    
Sbjct: 81  EQVYQEIAILKKLDHPNVVKLVEVLDD-----------PNEDHLYMVFELVNQGPVMEVP 129
Query: 576 RVRII---------EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARI 626
            ++ +         + + +G+ YLH     ++IHRD+K SN+L+ +D + KI+DFG++  
Sbjct: 130 TLKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNE 186
Query: 627 F-GGDELQSKTKRIVGTYGYMSPEYAQQ--GLFSIKS-DVFSFGVLL 669
           F G D L S T   VGT  +M+PE   +   +FS K+ DV++ GV L
Sbjct: 187 FKGSDALLSNT---VGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 16/209 (7%)
Query: 473 ATANFSTENKLGEGGFGPVYKGR-----LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAK 527
           A  +F     LG+G FG VY  R      +   +V  K    ++G  + + + E+++ + 
Sbjct: 32  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSH 90
Query: 528 LQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGL 587
           L+H N++R                  P  ++   L   +K +     T    I  +A  L
Sbjct: 91  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT---YITELANAL 147
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
            Y H     RVIHRD+K  N+LL      KI+DFG    +      S+   + GT  Y+ 
Sbjct: 148 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLP 200
Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           PE  +  +   K D++S GVL  E L  K
Sbjct: 201 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ +L   +  + IHRDL A NILL +    KI DFG+AR    D    +       
Sbjct: 148 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 204
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++I+SDV+SFGVLL E  S
Sbjct: 205 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ +L   +  + IHRDL A NILL +    KI DFG+AR    D    +       
Sbjct: 157 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 213
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++I+SDV+SFGVLL E  S
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ +L   +  + IHRDL A NILL +    KI DFG+AR    D    +       
Sbjct: 159 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 215
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++I+SDV+SFGVLL E  S
Sbjct: 216 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ +L   +  + IHRDL A NILL +    KI DFG+AR    D    +       
Sbjct: 148 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 204
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++I+SDV+SFGVLL E  S
Sbjct: 205 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 83/182 (45%), Gaps = 25/182 (13%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +   L YLH      +I+RDLK  NILLDK+ + KI+DFG A+      +   T  + GT
Sbjct: 115 VCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKY-----VPDVTYXLCGT 166
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRA 702
             Y++PE      ++   D +SFG+L+ E L+    T F ++N++       +       
Sbjct: 167 PDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGY--TPFYDSNTMKTYEKILNA------ 218
Query: 703 WELIDPTLQNEASYLILNRYINV-------GLLCVQEDAADRPTMFEVV-SMLTNKTINL 754
            EL  P   NE    +L+R I          L    ED  + P   EVV   L ++ I  
Sbjct: 219 -ELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIET 277
Query: 755 PH 756
           P+
Sbjct: 278 PY 279

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 16/209 (7%)
Query: 473 ATANFSTENKLGEGGFGPVYKGR-----LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAK 527
           A  +F     LG+G FG VY  R      +   +V  K    ++G  + + + E+++ + 
Sbjct: 7   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSH 65
Query: 528 LQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGL 587
           L+H N++R                  P  ++   L   +K +     T    I  +A  L
Sbjct: 66  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT---YITELANAL 122
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
            Y H     RVIHRD+K  N+LL      KI+DFG    +      S+   + GT  Y+ 
Sbjct: 123 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSCHAPSSRRTTLSGTLDYLP 175
Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           PE  +  +   K D++S GVL  E L  K
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 472 AATANFSTENKLGEGGFGPVYKGRLLNG----QEVAVKRLSSQSGQGQEEFKNEIK--LI 525
           A  + F     LG+G FG V+  + ++G    Q  A+K L   + + ++  + +++  ++
Sbjct: 21  ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDIL 80
Query: 526 AKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFF----LFDSTKENLLGWGTRVRIIE 581
            ++ H  +V+                      LDF     LF    + ++     V+   
Sbjct: 81  VEVNHPFIVKLHYAFQTEGKLYLI--------LDFLRGGDLFTRLSKEVMFTEEDVKFY- 131
Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            +A+  L L     L +I+RDLK  NILLD++ + K++DFG+++     + + K     G
Sbjct: 132 -LAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCG 188
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           T  YM+PE   +   +  +D +SFGVL+ E L+
Sbjct: 189 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT 221

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 25/204 (12%)
Query: 483 LGEGGFGPV-----YKGRLLNGQEVAVKRLSSQ---SGQGQEEFKNEIKLIAKLQHRNLV 534
           LGEG FG V     YK +    Q+VA+K +S Q           + EI  +  L+H +++
Sbjct: 17  LGEGSFGKVKLATHYKTQ----QKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHII 72
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
           +                    +  D+ +    K+ +     R R  + I   + Y H   
Sbjct: 73  KLYDVITTPTDIVMVIEYAGGELFDYIV---EKKRMTEDEGR-RFFQQIICAIEYCH--- 125
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIF-GGDELQSKTKRIVGTYGYMSPEYAQQ 653
           R +++HRDLK  N+LLD ++N KI+DFG++ I   G+ L++      G+  Y +PE    
Sbjct: 126 RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC----GSPNYAAPEVING 181
Query: 654 GLFS-IKSDVFSFGVLLLETLSSK 676
            L++  + DV+S G++L   L  +
Sbjct: 182 KLYAGPEVDVWSCGIVLYVMLVGR 205

>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ +L   +  + IHRDL A NILL +    KI DFG+AR    D    +       
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++I+SDV+SFGVLL E  S
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 16/209 (7%)
Query: 473 ATANFSTENKLGEGGFGPVYKGR-----LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAK 527
           A  +F     LG+G FG VY  R      +   +V  K    ++G  + + + E+++ + 
Sbjct: 32  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSH 90
Query: 528 LQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGL 587
           L+H N++R                  P  ++   L   +K +     T    I  +A  L
Sbjct: 91  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT---YITELANAL 147
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
            Y H     RVIHRD+K  N+LL      KI+DFG    +      S+   + GT  Y+ 
Sbjct: 148 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLCGTLDYLP 200
Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           PE  +  +   K D++S GVL  E L  K
Sbjct: 201 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229

>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ +L   +  + IHRDL A NILL +    KI DFG+AR    D    +       
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++I+SDV+SFGVLL E  S
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288

>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ +L   +  + IHRDL A NILL +    KI DFG+AR    D    +       
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++I+SDV+SFGVLL E  S
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290

>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ +L   +  + IHRDL A NILL +    KI DFG+AR    D    +       
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++I+SDV+SFGVLL E  S
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ +L   +  + IHRDL A NILL +    KI DFG+AR    D    +       
Sbjct: 153 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 209
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++I+SDV+SFGVLL E  S
Sbjct: 210 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ +L   +  + IHRDL A NILL +    KI DFG+AR    D    +       
Sbjct: 194 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 250
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++I+SDV+SFGVLL E  S
Sbjct: 251 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ +L   +  + IHRDL A NILL +    KI DFG+AR    D    +       
Sbjct: 153 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLP 209
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++I+SDV+SFGVLL E  S
Sbjct: 210 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 18/144 (12%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR--IFGGDELQSKTKRIV 640
           I   L++LH      +I+RDLK  N+LLD + + K++DFGM +  I  G      T    
Sbjct: 133 IISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG----VTTATFC 185
Query: 641 GTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDD 700
           GT  Y++PE  Q+ L+    D ++ GVLL E L      +  N +         DL++  
Sbjct: 186 GTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED---------DLFEAI 236
Query: 701 RAWELIDPTLQNEASYLILNRYIN 724
              E++ PT  +E +  IL  ++ 
Sbjct: 237 LNDEVVYPTWLHEDATGILKSFMT 260

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 93/209 (44%), Gaps = 14/209 (6%)
Query: 467 LASVSAATANFSTENKLGEGGFGPVYKG-RLLNGQEVAVKRLSSQ--SGQGQEEFKNEIK 523
           +A+ +  T ++    +LG+G F  V +  +    QE A K ++++  S +  ++ + E +
Sbjct: 23  MATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREAR 82
Query: 524 LIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGI 583
           +   L+H N+VR                 +    L     D               I  I
Sbjct: 83  ICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIHQI 139
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLD---KDMNPKISDFGMARIFGGDELQSKTKRIV 640
            + + ++HQ+    ++HRDLK  N+LL    K    K++DFG+A    G+  Q       
Sbjct: 140 LESVNHIHQHD---IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGE--QQAWFGFA 194
Query: 641 GTYGYMSPEYAQQGLFSIKSDVFSFGVLL 669
           GT GY+SPE  ++  +    D+++ GV+L
Sbjct: 195 GTPGYLSPEVLRKDPYGKPVDIWACGVIL 223

>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/117 (37%), Positives = 66/117 (56%), Gaps = 13/117 (11%)
Query: 560 FFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKIS 619
           F+    T E+L+ +  +V      A+G+ +L   S  + IHRDL A NILL ++   KI 
Sbjct: 191 FYKEPITMEDLISYSFQV------ARGMEFL---SSRKCIHRDLAARNILLSENNVVKIC 241
Query: 620 DFGMAR-IFGG-DELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           DFG+AR I+   D ++    R+     +M+PE     ++S KSDV+S+GVLL E  S
Sbjct: 242 DFGLARDIYKNPDYVRKGDTRL--PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 472 AATANFSTENKLGEGGFGPVYKGRLLNG----QEVAVKRLSSQSGQGQEEFKNEIK--LI 525
           A  + F     LG+G FG V+  + ++G    Q  A+K L   + + ++  + +++  ++
Sbjct: 22  ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDIL 81
Query: 526 AKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFF----LFDSTKENLLGWGTRVRIIE 581
            ++ H  +V+                      LDF     LF    + ++     V+   
Sbjct: 82  VEVNHPFIVKLHYAFQTEGKLYLI--------LDFLRGGDLFTRLSKEVMFTEEDVKFY- 132
Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            +A+  L L     L +I+RDLK  NILLD++ + K++DFG+++     + + K     G
Sbjct: 133 -LAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCG 189
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           T  YM+PE   +   +  +D +SFGVL+ E L+
Sbjct: 190 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT 222

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 472 AATANFSTENKLGEGGFGPVYKGRLLNG----QEVAVKRLSSQSGQGQEEFKNEIK--LI 525
           A  + F     LG+G FG V+  + ++G    Q  A+K L   + + ++  + +++  ++
Sbjct: 21  ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDIL 80
Query: 526 AKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFF----LFDSTKENLLGWGTRVRIIE 581
            ++ H  +V+                      LDF     LF    + ++     V+   
Sbjct: 81  VEVNHPFIVKLHYAFQTEGKLYLI--------LDFLRGGDLFTRLSKEVMFTEEDVKFY- 131
Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            +A+  L L     L +I+RDLK  NILLD++ + K++DFG+++     + + K     G
Sbjct: 132 -LAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCG 188
Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           T  YM+PE   +   +  +D +SFGVL+ E L+
Sbjct: 189 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT 221

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 128/315 (40%), Gaps = 43/315 (13%)
Query: 483 LGEGGFGPVYKGRLLN---GQEVAVK-----RLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
           +G+G F  V   R +N   GQ+ AVK     + +S  G   E+ K E  +   L+H ++V
Sbjct: 32  IGKGAFSVVR--RCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLL-GWGTRVRIIEGIAQGLLYLHQY 593
                             M    L F +        +         +  I + L Y H  
Sbjct: 90  ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN 149
Query: 594 SRLRVIHRDLKASNILLDKDMNP---KISDFGMARIFGGDELQSKTKRIVGTYGYMSPEY 650
           +   +IHRD+K  N+LL    N    K+ DFG+A   G   L +  +  VGT  +M+PE 
Sbjct: 150 N---IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGR--VGTPHFMAPEV 204
Query: 651 AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWK-DDRAWELIDPT 709
            ++  +    DV+  GV+L   LS      F  T      G     +K + R W  I   
Sbjct: 205 VKREPYGKPVDVWGCGVILFILLSG--CLPFYGTKERLFEGIIKGKYKMNPRQWSHI--- 259
Query: 710 LQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK-------TINLPHPRQP-- 760
             +E++  ++ R + +       D A+R T++E ++    K        I+LP   +   
Sbjct: 260 --SESAKDLVRRMLML-------DPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLR 310
Query: 761 AFSSIRGLKNTILPA 775
            F++ R LK  +L A
Sbjct: 311 KFNARRKLKGAVLAA 325

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 68/121 (56%), Gaps = 15/121 (12%)
Query: 562 LFDSTKENL-LGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISD 620
           LFD   E + L      +I+  + + +  LH   +L ++HRDLK  NILLD DMN K++D
Sbjct: 111 LFDYLTEKVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTD 167
Query: 621 FGMA-RIFGGDELQSKTKRIVGTYGYMSPEYAQQGL------FSIKSDVFSFGVLLLETL 673
           FG + ++  G++L+S    + GT  Y++PE  +  +      +  + D++S GV++   L
Sbjct: 168 FGFSCQLDPGEKLRS----VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLL 223
Query: 674 S 674
           +
Sbjct: 224 A 224

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 88/209 (42%), Gaps = 16/209 (7%)
Query: 473 ATANFSTENKLGEGGFGPVYKGR-----LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAK 527
           A  +F     LG+G FG VY  R      +   +V  K    ++G  + + + E+++ + 
Sbjct: 11  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSH 69
Query: 528 LQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGL 587
           L+H N++R                  P  ++   L   +K +     T    I  +A  L
Sbjct: 70  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT---YITELANAL 126
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
            Y H     RVIHRD+K  N+LL      KI+DFG    +      S+   + GT  Y+ 
Sbjct: 127 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLP 179
Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           PE  +      K D++S GVL  E L  K
Sbjct: 180 PEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208

>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 129/280 (46%), Gaps = 47/280 (16%)
Query: 482 KLGEGGFGPVYKGR-LLNGQEVAVKRL-SSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +LG G +G V K R + +GQ  AVKR+ ++ + Q Q+    ++ +  +            
Sbjct: 41  ELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYG 100
Query: 540 XXXXXXXXXXXXXMPNKSLDFF---LFD---STKENLLGWGTRVRIIEGIAQGLLYLHQY 593
                        + + SLD F   + D   +  E++LG     +I   I + L +LH  
Sbjct: 101 ALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILG-----KIAVSIVKALEHLH-- 153
Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRI-VGTYGY-----MS 647
           S+L VIHRD+K SN+L++     K  DFG++    G  +    K I  G   Y     ++
Sbjct: 154 SKLSVIHRDVKPSNVLINALGQVKXCDFGIS----GYLVDDVAKDIDAGCKPYXAPERIN 209
Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID 707
           PE  Q+G +S+KSD++S G+  +E               L +L   +D W     ++ + 
Sbjct: 210 PELNQKG-YSVKSDIWSLGITXIE---------------LAILRFPYDSW--GTPFQQLK 251
Query: 708 PTLQNEASYLILNR----YINVGLLCVQEDAADRPTMFEV 743
             ++  +  L  ++    +++    C+++++ +RPT  E+
Sbjct: 252 QVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPEL 291

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 482 KLGEGGFGPVYKGRLLNGQE-VAVKRL---SSQSGQGQEEFKNEIKLIAKLQHRNLVRXX 537
           K+GEG +G V+K +     E VA+KR+       G      + EI L+ +L+H+N+VR  
Sbjct: 9   KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR-EICLLKELKHKNIVRLH 67
Query: 538 XXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLR 597
                            ++ L  + FDS   +L     +  + + + +GL + H  +   
Sbjct: 68  DVLHSDKKLTLVFEFC-DQDLKKY-FDSCNGDLDPEIVKSFLFQ-LLKGLGFCHSRN--- 121
Query: 598 VIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYA-QQGLF 656
           V+HRDLK  N+L++++   K++DFG+AR FG   ++  +  +V T  Y  P+      L+
Sbjct: 122 VLHRDLKPQNLLINRNGELKLADFGLARAFGI-PVRCYSAEVV-TLWYRPPDVLFGAKLY 179
Query: 657 SIKSDVFSFGVLLLETLSSKR 677
           S   D++S G +  E  ++ R
Sbjct: 180 STSIDMWSAGCIFAELANAAR 200

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 106/231 (45%), Gaps = 39/231 (16%)
Query: 477 FSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNL 533
           + T + +G G +G V     + +G ++AVK+LS   QS    +    E++L+  ++H N+
Sbjct: 53  YQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 112
Query: 534 VRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------II 580
           +                   P  SL+ F       +L+G      V+           +I
Sbjct: 113 I------------GLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 160
Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIV 640
             I +GL Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V
Sbjct: 161 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YV 212
Query: 641 GTYGYMSPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
            T  Y +PE     + +++  D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 213 ATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR--TLFPGTDHINQL 261

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 84/192 (43%), Gaps = 18/192 (9%)
Query: 483 LGEGGFGPVY--KGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXX 540
           LG G F  V+  K RL  G+  A+K +           +NEI ++ K++H N+V      
Sbjct: 17  LGSGAFSEVFLVKQRL-TGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIY 75
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKE-NLLGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
                       +    L    FD   E  +        +I+ +   + YLH+     ++
Sbjct: 76  ESTTHYYLVMQLVSGGEL----FDRILERGVYTEKDASLVIQQVLSAVKYLHENG---IV 128
Query: 600 HRDLKASNIL-LDKDMNPKI--SDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLF 656
           HRDLK  N+L L  + N KI  +DFG++++    E         GT GY++PE   Q  +
Sbjct: 129 HRDLKPENLLYLTPEENSKIMITDFGLSKM----EQNGIMSTACGTPGYVAPEVLAQKPY 184
Query: 657 SIKSDVFSFGVL 668
           S   D +S GV+
Sbjct: 185 SKAVDCWSIGVI 196

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 58/109 (53%), Gaps = 9/109 (8%)
Query: 566 TKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR 625
           T E+LL +  +V      A+G+ +L   S    +HRDL A N+L+      KI DFG+AR
Sbjct: 170 TFEDLLCFAYQV------AKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLAR 220
Query: 626 IFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
               D              +M+PE   +G+++IKSDV+S+G+LL E  S
Sbjct: 221 DIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 114/304 (37%), Gaps = 44/304 (14%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLN-GQE-----VAVKRLSSQSGQGQEE-FKNEIKLIAKL 528
           N      LG G FG V +      G+E     VAVK L S +   ++E   +E+K+++ L
Sbjct: 32  NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 91
Query: 529 -QHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFL--------------------FDSTK 567
            QH N+V                       L  FL                     D   
Sbjct: 92  GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKED 151
Query: 568 ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF 627
              L     +     +AQG+ +L   +    IHRD+ A N+LL      KI DFG+AR  
Sbjct: 152 GRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI 208
Query: 628 GGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSL 687
             D              +M+PE     +++++SDV+S+G+LL E  S   N        +
Sbjct: 209 MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP----YPGI 264
Query: 688 TLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML 747
            +    + L KD   +++  P    +  Y I+         C   +   RPT  ++ S L
Sbjct: 265 LVNSKFYKLVKD--GYQMAQPAFAPKNIYSIMQA-------CWALEPTHRPTFQQICSFL 315
Query: 748 TNKT 751
             + 
Sbjct: 316 QEQA 319

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 85/203 (41%), Gaps = 16/203 (7%)
Query: 476 NFSTENKLGEGGFGPVYKGR-----LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQH 530
           +F     LG+G FG VY  R      +   +V  K    ++G  + + + E+++ + L+H
Sbjct: 13  DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGV-EHQLRREVEIQSHLRH 71
Query: 531 RNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYL 590
            N++R                  P   L     +  K +          I  +A  L Y 
Sbjct: 72  PNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSRFDEQRTATYITELANALSYC 128
Query: 591 HQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEY 650
           H     RVIHRD+K  N+LL  +   KI+DFG    +      S+   + GT  Y+ PE 
Sbjct: 129 HSK---RVIHRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRDTLCGTLDYLPPEM 181
Query: 651 AQQGLFSIKSDVFSFGVLLLETL 673
            +  +   K D++S GVL  E L
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFL 204

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 85/203 (41%), Gaps = 16/203 (7%)
Query: 476 NFSTENKLGEGGFGPVYKGR-----LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQH 530
           +F     LG+G FG VY  R      +   +V  K    ++G  + + + E+++ + L+H
Sbjct: 13  DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGV-EHQLRREVEIQSHLRH 71
Query: 531 RNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYL 590
            N++R                  P   L     +  K +          I  +A  L Y 
Sbjct: 72  PNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSRFDEQRTATYITELANALSYC 128
Query: 591 HQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEY 650
           H     RVIHRD+K  N+LL  +   KI+DFG    +      S+   + GT  Y+ PE 
Sbjct: 129 HSK---RVIHRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM 181
Query: 651 AQQGLFSIKSDVFSFGVLLLETL 673
            +  +   K D++S GVL  E L
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFL 204

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 63/120 (52%), Gaps = 13/120 (10%)
Query: 562 LFDSTKENL-LGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISD 620
           LFD   E + L      +I+  + + +  LH   +L ++HRDLK  NILLD DMN K++D
Sbjct: 98  LFDYLTEKVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTD 154
Query: 621 FGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGL------FSIKSDVFSFGVLLLETLS 674
           FG +      E   K + + GT  Y++PE  +  +      +  + D++S GV++   L+
Sbjct: 155 FGFSCQLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 211

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 89/209 (42%), Gaps = 16/209 (7%)
Query: 473 ATANFSTENKLGEGGFGPVYKGR-----LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAK 527
           A  +F     LG+G FG VY  R      +   +V  K    ++G  + + + E+++ + 
Sbjct: 8   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSH 66
Query: 528 LQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGL 587
           L+H N++R                  P  ++   L   +K +     T    I  +A  L
Sbjct: 67  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT---YITELANAL 123
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
            Y H     RVIHRD+K  N+LL      KI++FG    +      S+   + GT  Y+ 
Sbjct: 124 SYCHSK---RVIHRDIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTLCGTLDYLP 176
Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           PE  +  +   K D++S GVL  E L  K
Sbjct: 177 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 21/205 (10%)
Query: 483 LGEGGFGPVYKGRLLNGQ----EVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRNLVRX 536
           LGEG FG V +G L        +VAVK  +L + S +  EEF +E   +    H N++R 
Sbjct: 42  LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 537 XXXXXXXXXX-----XXXXXXMPNKSLDFFLFDS---TKENLLGWGTRVRIIEGIAQGLL 588
                                M    L  +L  S   T    +   T ++ +  IA G+ 
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMA-RIFGGDEL-QSKTKRIVGTYGYM 646
           YL   S    +HRDL A N +L  DM   ++DFG++ +I+ GD   Q +  ++     ++
Sbjct: 162 YL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKM--PVKWI 216
Query: 647 SPEYAQQGLFSIKSDVFSFGVLLLE 671
           + E     +++ KSDV++FGV + E
Sbjct: 217 AIESLADRVYTSKSDVWAFGVTMWE 241

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 63/120 (52%), Gaps = 13/120 (10%)
Query: 562 LFDSTKENL-LGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISD 620
           LFD   E + L      +I+  + + +  LH   +L ++HRDLK  NILLD DMN K++D
Sbjct: 111 LFDYLTEKVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTD 167
Query: 621 FGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGL------FSIKSDVFSFGVLLLETLS 674
           FG +      E   K + + GT  Y++PE  +  +      +  + D++S GV++   L+
Sbjct: 168 FGFSCQLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 224

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 104/229 (45%), Gaps = 43/229 (18%)
Query: 469 SVSAATANFSTE-----NKLGEGGFGPVYKG-RLLNGQEVAVKRL---SSQSGQGQEEFK 519
           SVSAA +  S +      KLGEG +G VYK    +  + VA+KR+     + G      +
Sbjct: 23  SVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIR 82
Query: 520 NEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTR--- 576
            E+ L+ +LQHRN++                    N  L   +F+  + +L  +  +   
Sbjct: 83  -EVSLLKELQHRNIIELKSVIHH------------NHRLHL-IFEYAENDLKKYMDKNPD 128
Query: 577 --VRIIEG----IAQGLLYLHQYSRLRVIHRDLKASNILL---DKDMNP--KISDFGMAR 625
             +R+I+     +  G+ + H  SR R +HRDLK  N+LL   D    P  KI DFG+AR
Sbjct: 129 VSMRVIKSFLYQLINGVNFCH--SR-RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185
Query: 626 IFGGDELQSKTKRIVGTYGYMSPEYAQQGL-FSIKSDVFSFGVLLLETL 673
            F G  ++  T  I+ T  Y  PE       +S   D++S   +  E L
Sbjct: 186 AF-GIPIRQFTHEII-TLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 21/199 (10%)
Query: 477 FSTENKLGEGGFGPVYKGRLLNGQE-VAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR 535
           F  E++LG G    VY+ +    Q+  A+K L  +    ++  + EI ++ +L H N+++
Sbjct: 55  FEVESELGRGATSIVYRCKQKGTQKPYALKVL--KKTVDKKIVRTEIGVLLRLSHPNIIK 112
Query: 536 XXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTR---VRIIEGIAQGLLYLHQ 592
                            +    L    FD   E   G+ +       ++ I + + YLH+
Sbjct: 113 LKEIFETPTEISLVLELVTGGEL----FDRIVEK--GYYSERDAADAVKQILEAVAYLHE 166
Query: 593 YSRLRVIHRDLKASNILLDK---DMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPE 649
                ++HRDLK  N+L      D   KI+DFG+++I    E Q   K + GT GY +PE
Sbjct: 167 NG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQVLMKTVCGTPGYCAPE 220
Query: 650 YAQQGLFSIKSDVFSFGVL 668
             +   +  + D++S G++
Sbjct: 221 ILRGCAYGPEVDMWSVGII 239

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 89/209 (42%), Gaps = 16/209 (7%)
Query: 473 ATANFSTENKLGEGGFGPVYKGR-----LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAK 527
           A  +F     LG+G FG VY  R      +   +V  K    ++G  + + + E+++ + 
Sbjct: 9   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSH 67
Query: 528 LQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGL 587
           L+H N++R                  P  ++   L   +K +     T    I  +A  L
Sbjct: 68  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT---YITELANAL 124
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
            Y H     RVIHRD+K  N+LL      KI++FG    +      S+   + GT  Y+ 
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTLCGTLDYLP 177
Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           PE  +  +   K D++S GVL  E L  K
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ YL   +  + IHRDL A N+L+ ++   KI+DFG+AR     +   KT      
Sbjct: 166 LARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLP 222
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++ +SDV+SFGVL+ E  +
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ YL   +  + IHRDL A N+L+ ++   KI+DFG+AR     +   KT      
Sbjct: 166 LARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLP 222
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++ +SDV+SFGVL+ E  +
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ YL   +  + IHRDL A N+L+ ++   KI+DFG+AR     +   KT      
Sbjct: 158 LARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 214
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++ +SDV+SFGVL+ E  +
Sbjct: 215 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 92/199 (46%), Gaps = 18/199 (9%)
Query: 477 FSTENKLGEGGFGPVYKGRLLNGQEV--AVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
           ++ EN +G G +G V K  +  G  +  A K++     +  + FK EI+++  L H N++
Sbjct: 11  YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 69
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDST-KENLLGWGTRVRIIEGIAQGLLYLHQY 593
           R                      L    F+    + +       RI++ +   + Y H  
Sbjct: 70  RLYETFEDNTDIYLVMELCTGGEL----FERVVHKRVFRESDAARIMKDVLSAVAYCH-- 123
Query: 594 SRLRVIHRDLKASNILL--DKDMNP-KISDFGMARIFGGDELQSKTKRIVGTYGYMSPEY 650
            +L V HRDLK  N L   D   +P K+ DFG+A  F   ++  +TK  VGT  Y+SP+ 
Sbjct: 124 -KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMM-RTK--VGTPYYVSPQ- 178
Query: 651 AQQGLFSIKSDVFSFGVLL 669
             +GL+  + D +S GV++
Sbjct: 179 VLEGLYGPECDEWSAGVMM 197

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 9/107 (8%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR--IFGGDELQSKTKRIV 640
           IA GL +L       +I+RDLK  N++LD + + KI+DFGM +  I+ G      TK   
Sbjct: 451 IAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG----VTTKXFC 503
Query: 641 GTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSL 687
           GT  Y++PE      +    D ++FGVLL E L+ +   +  + + L
Sbjct: 504 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL 550

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ YL   +  + IHRDL A N+L+ ++   KI+DFG+AR     +   KT      
Sbjct: 155 LARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 211
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++ +SDV+SFGVL+ E  +
Sbjct: 212 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ YL   +  + IHRDL A N+L+ ++   KI+DFG+AR     +   KT      
Sbjct: 153 LARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 209
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++ +SDV+SFGVL+ E  +
Sbjct: 210 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ YL   +  + IHRDL A N+L+ ++   KI+DFG+AR     +   KT      
Sbjct: 212 LARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 268
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++ +SDV+SFGVL+ E  +
Sbjct: 269 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 56.6 bits (135), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ YL   +  + IHRDL A N+L+ ++   KI+DFG+AR     +   KT      
Sbjct: 166 LARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 222
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++ +SDV+SFGVL+ E  +
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 56.6 bits (135), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ YL   +  + IHRDL A N+L+ ++   KI+DFG+AR     +   KT      
Sbjct: 166 LARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 222
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++ +SDV+SFGVL+ E  +
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 56.6 bits (135), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ YL   +  + IHRDL A N+L+ ++   KI+DFG+AR     +   KT      
Sbjct: 166 LARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 222
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++ +SDV+SFGVL+ E  +
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ YL   +  + IHRDL A N+L+ ++   KI+DFG+AR     +   KT      
Sbjct: 166 LARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 222
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++ +SDV+SFGVL+ E  +
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ YL   +  + IHRDL A N+L+ ++   KI+DFG+AR     +   KT      
Sbjct: 166 LARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 222
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++ +SDV+SFGVL+ E  +
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 10/148 (6%)
Query: 481 NKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXX 537
           +KLGEG +  VYKG+  L    VA+K  RL  + G      + E+ L+  L+H N+V   
Sbjct: 8   DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIR-EVSLLKDLKHANIVTLH 66
Query: 538 XXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLR 597
                          + +K L  +L D    N++        +  + +GL Y H   R +
Sbjct: 67  DIIHTEKSLTLVFEYL-DKDLKQYLDDCG--NIINMHNVKLFLFQLLRGLAYCH---RQK 120
Query: 598 VIHRDLKASNILLDKDMNPKISDFGMAR 625
           V+HRDLK  N+L+++    K++DFG+AR
Sbjct: 121 VLHRDLKPQNLLINERGELKLADFGLAR 148

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 92/199 (46%), Gaps = 18/199 (9%)
Query: 477 FSTENKLGEGGFGPVYKGRLLNGQEV--AVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
           ++ EN +G G +G V K  +  G  +  A K++     +  + FK EI+++  L H N++
Sbjct: 28  YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 86
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDST-KENLLGWGTRVRIIEGIAQGLLYLHQY 593
           R                      L    F+    + +       RI++ +   + Y H  
Sbjct: 87  RLYETFEDNTDIYLVMELCTGGEL----FERVVHKRVFRESDAARIMKDVLSAVAYCH-- 140
Query: 594 SRLRVIHRDLKASNILL--DKDMNP-KISDFGMARIFGGDELQSKTKRIVGTYGYMSPEY 650
            +L V HRDLK  N L   D   +P K+ DFG+A  F   ++  +TK  VGT  Y+SP+ 
Sbjct: 141 -KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMM-RTK--VGTPYYVSPQ- 195
Query: 651 AQQGLFSIKSDVFSFGVLL 669
             +GL+  + D +S GV++
Sbjct: 196 VLEGLYGPECDEWSAGVMM 214

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 9/107 (8%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR--IFGGDELQSKTKRIV 640
           IA GL +L       +I+RDLK  N++LD + + KI+DFGM +  I+ G      TK   
Sbjct: 130 IAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG----VTTKXFC 182
Query: 641 GTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSL 687
           GT  Y++PE      +    D ++FGVLL E L+ +   +  + + L
Sbjct: 183 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL 229

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 26  VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 80
Query: 540 XXXXXXXXXXXXXMPNKSLDFF--------LFDSTKENLLGWGTRVR-----IIEGIAQG 586
                         P +SL+ F        L  +   N++            +I  I +G
Sbjct: 81  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRG 133
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 134 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YVATRWYR 185
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 186 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 228

>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human Tgf- Beta Type I Receptor Length = 303

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKN-EIKLIAKLQHRNLVRXXX 538
           +  +G+G FG V++G+   G+EVAVK  SS+  + +  F+  EI     L+H N++    
Sbjct: 8   QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIA 64
Query: 539 XXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ-----Y 593
                         + +      LFD      +     +++    A GL +LH       
Sbjct: 65  ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 124
Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMA--RIFGGDELQSKTKRIVGTYGYMSPEYA 651
            +  + HRDLK+ NIL+ K+    I+D G+A       D +       VGT  YM+PE  
Sbjct: 125 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 184
Query: 652 QQGL-------FSIKSDVFSFGVLLLE 671
              +       F  ++D+++ G++  E
Sbjct: 185 DDSINMKHFESFK-RADIYAMGLVFWE 210

>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp Site Inhibitor Length = 301

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKN-EIKLIAKLQHRNLVRXXX 538
           +  +G+G FG V++G+   G+EVAVK  SS+  + +  F+  EI     L+H N++    
Sbjct: 9   QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIA 65
Query: 539 XXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ-----Y 593
                         + +      LFD      +     +++    A GL +LH       
Sbjct: 66  ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 125
Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMA--RIFGGDELQSKTKRIVGTYGYMSPEYA 651
            +  + HRDLK+ NIL+ K+    I+D G+A       D +       VGT  YM+PE  
Sbjct: 126 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 185
Query: 652 QQGL-------FSIKSDVFSFGVLLLE 671
              +       F  ++D+++ G++  E
Sbjct: 186 DDSINMKHFESFK-RADIYAMGLVFWE 211

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 34/212 (16%)
Query: 474 TANFSTENKLGEGGFGPVYKG-RLLNGQEVAVKRLSSQ--SGQGQEEFKNEIKLIAKLQH 530
           T  +    +LG+G F  V +  ++  GQE A K ++++  S +  ++ + E ++   L+H
Sbjct: 3   TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 531 RNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVR----------II 580
            N+VR                 +  +   + +FD      L      R           I
Sbjct: 63  PNIVRLHDS-------------ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCI 109
Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILL---DKDMNPKISDFGMARIFGGDELQSKTK 637
           + I + + + H      ++HRDLK  N+LL    K    K++DFG+A    GD  Q    
Sbjct: 110 QQILESVNHCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGD--QQAWF 164
Query: 638 RIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLL 669
              GT GY+SPE  ++  +    D+++ GV+L
Sbjct: 165 GFAGTPGYLSPEVLRKDPYGKPVDMWACGVIL 196

>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Inhibitor Length = 326

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKN-EIKLIAKLQHRNLVRXXX 538
           +  +G+G FG V++G+   G+EVAVK  SS+  + +  F+  EI     L+H N++    
Sbjct: 34  QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIA 90
Query: 539 XXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ-----Y 593
                         + +      LFD      +     +++    A GL +LH       
Sbjct: 91  ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 150
Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMA--RIFGGDELQSKTKRIVGTYGYMSPEYA 651
            +  + HRDLK+ NIL+ K+    I+D G+A       D +       VGT  YM+PE  
Sbjct: 151 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 210
Query: 652 QQGL-------FSIKSDVFSFGVLLLE 671
              +       F  ++D+++ G++  E
Sbjct: 211 DDSINMKHFESFK-RADIYAMGLVFWE 236

>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542 Length = 309

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKN-EIKLIAKLQHRNLVRXXX 538
           +  +G+G FG V++G+   G+EVAVK  SS+  + +  F+  EI     L+H N++    
Sbjct: 14  QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIA 70
Query: 539 XXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ-----Y 593
                         + +      LFD      +     +++    A GL +LH       
Sbjct: 71  ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 130
Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMA--RIFGGDELQSKTKRIVGTYGYMSPEYA 651
            +  + HRDLK+ NIL+ K+    I+D G+A       D +       VGT  YM+PE  
Sbjct: 131 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 190
Query: 652 QQGL-------FSIKSDVFSFGVLLLE 671
              +       F  ++D+++ G++  E
Sbjct: 191 DDSINMKHFESFK-RADIYAMGLVFWE 216

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 26  VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 80
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 81  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 133
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 134 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMAG----FVATRWYR 185
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 186 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 228

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 34/212 (16%)
Query: 474 TANFSTENKLGEGGFGPVYKG-RLLNGQEVAVKRLSSQ--SGQGQEEFKNEIKLIAKLQH 530
           T  +    +LG+G F  V +  ++  GQE A K ++++  S +  ++ + E ++   L+H
Sbjct: 3   TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 531 RNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVR----------II 580
            N+VR                 +  +   + +FD      L      R           I
Sbjct: 63  PNIVRLHDS-------------ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCI 109
Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILL---DKDMNPKISDFGMARIFGGDELQSKTK 637
           + I + + + H      ++HRDLK  N+LL    K    K++DFG+A    GD  Q    
Sbjct: 110 QQILESVNHCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGD--QQAWF 164
Query: 638 RIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLL 669
              GT GY+SPE  ++  +    D+++ GV+L
Sbjct: 165 GFAGTPGYLSPEVLRKDPYGKPVDMWACGVIL 196

>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I Tgf-Beta Receptor In Complex With Fkbp12 Length = 342

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKN-EIKLIAKLQHRNLVRXXX 538
           +  +G+G FG V++G+   G+EVAVK  SS+  + +  F+  EI     L+H N++    
Sbjct: 47  QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIA 103
Query: 539 XXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ-----Y 593
                         + +      LFD      +     +++    A GL +LH       
Sbjct: 104 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 163
Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMA--RIFGGDELQSKTKRIVGTYGYMSPEYA 651
            +  + HRDLK+ NIL+ K+    I+D G+A       D +       VGT  YM+PE  
Sbjct: 164 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 223
Query: 652 QQGL-------FSIKSDVFSFGVLLLE 671
              +       F  ++D+++ G++  E
Sbjct: 224 DDSINMKHFESFK-RADIYAMGLVFWE 249

>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 72/161 (44%), Gaps = 13/161 (8%)
Query: 516 EEFKNEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSL-----DFFLFDSTKENL 570
           ++FKNE+++I  +++   +                  M N S+      FF+ D      
Sbjct: 88  DDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCF 147
Query: 571 LGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD 630
           +       II+ +     Y+H  +   + HRD+K SNIL+DK+   K+SDFG +      
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIH--NEKNICHRDVKPSNILMDKNGRVKLSDFGESEYM--- 202
Query: 631 ELQSKTKRIVGTYGYMSPEY--AQQGLFSIKSDVFSFGVLL 669
            +  K K   GTY +M PE+   +      K D++S G+ L
Sbjct: 203 -VDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242

>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3- Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine Length = 306

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKN-EIKLIAKLQHRNLVRXXX 538
           +  +G+G FG V++G+   G+EVAVK  SS+  + +  F+  EI     L+H N++    
Sbjct: 11  QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIA 67
Query: 539 XXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ-----Y 593
                         + +      LFD      +     +++    A GL +LH       
Sbjct: 68  ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 127
Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMA--RIFGGDELQSKTKRIVGTYGYMSPEYA 651
            +  + HRDLK+ NIL+ K+    I+D G+A       D +       VGT  YM+PE  
Sbjct: 128 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 187
Query: 652 QQGL-------FSIKSDVFSFGVLLLE 671
              +       F  ++D+++ G++  E
Sbjct: 188 DDSINMKHFESFK-RADIYAMGLVFWE 213

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ YL   +  + IHRDL A N+L+ ++   +I+DFG+AR     +   KT      
Sbjct: 166 LARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLP 222
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++ +SDV+SFGVL+ E  +
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 30  VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 84
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 85  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMAG----FVATRWYR 189
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 30  VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 84
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 85  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMAG----FVATRWYR 189
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 26  VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 80
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 81  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 133
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 134 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YVATRWYR 185
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 186 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 228

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 9/95 (9%)
Query: 577 VRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDM---NPKISDFGMARIFGGDELQ 633
           +R+I+ I +G+ YLHQ +   ++H DLK  NILL       + KI DFGM+R  G     
Sbjct: 134 IRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGH---A 187
Query: 634 SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVL 668
            + + I+GT  Y++PE       +  +D+++ G++
Sbjct: 188 CELREIMGTPEYLAPEILNYDPITTATDMWNIGII 222

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 85/202 (42%), Gaps = 14/202 (6%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQEV-AVKRL--SSQSGQGQE-EFKNEIKLIAKLQHR 531
           +F     LG+G FG VY  R    + + A+K L  S    +G E + + EI++ + L+H 
Sbjct: 15  DFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 74
Query: 532 NLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH 591
           N++R                  P   L     +  K            +E +A  L Y H
Sbjct: 75  NILRMYNYFHDRKRIYLMLEFAPRGEL---YKELQKHGRFDEQRSATFMEELADALHYCH 131
Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYA 651
           +    +VIHRD+K  N+L+      KI+DFG    +       + + + GT  Y+ PE  
Sbjct: 132 ER---KVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMI 184
Query: 652 QQGLFSIKSDVFSFGVLLLETL 673
           +      K D++  GVL  E L
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFL 206

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 36  VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 90
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGT------------RVR-IIEGIAQG 586
                         P +SL+ F       +L+G                V+ +I  I +G
Sbjct: 91  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 143
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 144 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YVATRWYR 195
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 238

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 40  VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 94
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 95  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 147
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 148 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YVATRWYR 199
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 200 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 242

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 84
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 85  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YVATRWYR 189
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 190 APEIMLNAMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 50  VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 104
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 105 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 157
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 158 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMXGX----VATRWYR 209
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 210 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 252

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 482 KLGEGGFGPVYKGRLLNGQE-VAVKRL---SSQSGQGQEEFKNEIKLIAKLQHRNLVRXX 537
           K+GEG +G V+K +     E VA+KR+       G      + EI L+ +L+H+N+VR  
Sbjct: 9   KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR-EICLLKELKHKNIVRLH 67
Query: 538 XXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLR 597
                            ++ L  + FDS   +L     +  + + + +GL + H  +   
Sbjct: 68  DVLHSDKKLTLVFEFC-DQDLKKY-FDSCNGDLDPEIVKSFLFQ-LLKGLGFCHSRN--- 121
Query: 598 VIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYA-QQGLF 656
           V+HRDLK  N+L++++   K+++FG+AR FG   ++  +  +V T  Y  P+      L+
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGI-PVRCYSAEVV-TLWYRPPDVLFGAKLY 179
Query: 657 SIKSDVFSFGVLLLETLSSKR 677
           S   D++S G +  E  ++ R
Sbjct: 180 STSIDMWSAGCIFAELANAGR 200

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 30  VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 84
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 85  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YVATRWYR 189
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 85/202 (42%), Gaps = 14/202 (6%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQEV-AVKRL--SSQSGQGQE-EFKNEIKLIAKLQHR 531
           +F     LG+G FG VY  R    + + A+K L  S    +G E + + EI++ + L+H 
Sbjct: 16  DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 75
Query: 532 NLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH 591
           N++R                  P   L     +  K            +E +A  L Y H
Sbjct: 76  NILRMYNYFHDRKRIYLMLEFAPRGEL---YKELQKHGRFDEQRSATFMEELADALHYCH 132
Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYA 651
           +    +VIHRD+K  N+L+      KI+DFG    +       + + + GT  Y+ PE  
Sbjct: 133 ER---KVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMI 185
Query: 652 QQGLFSIKSDVFSFGVLLLETL 673
           +      K D++  GVL  E L
Sbjct: 186 EGKTHDEKVDLWCAGVLCYEFL 207

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 37  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 91
Query: 540 XXXXXXXXXXXXXMPNKSLDFF--------LFDSTKENLLGWGTRVR-----IIEGIAQG 586
                         P +SL+ F        L  +   N++            +I  I +G
Sbjct: 92  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 144
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 145 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTADEMTG----YVATRWYR 196
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 239

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ YL   +  + IHRDL A N+L+ ++   KI+DFG+AR     +    T      
Sbjct: 166 LARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLP 222
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++ +SDV+SFGVL+ E  +
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 49  VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 103
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 104 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 156
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 157 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YVATRWYR 208
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 209 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 251

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 37  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 91
Query: 540 XXXXXXXXXXXXXMPNKSLDFF--------LFDSTKENLLGWGTRVR-----IIEGIAQG 586
                         P +SL+ F        L  +   N++            +I  I +G
Sbjct: 92  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 144
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 145 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTADEMTG----YVATRWYR 196
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 239

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/227 (23%), Positives = 105/227 (46%), Gaps = 16/227 (7%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQEV-AVKRLSSQSGQGQEEFKN---EIKLIAKLQHR 531
           +F     +G+G FG V   +  + +++ A+K ++ Q    + E +N   E++++  L+H 
Sbjct: 16  HFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHP 75
Query: 532 NLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH 591
            LV                  +    L + L    ++N+      V++   I + ++ L 
Sbjct: 76  FLVNLWYSFQDEEDMFMVVDLLLGGDLRYHL----QQNVHFKEETVKLF--ICELVMALD 129
Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEY- 650
                R+IHRD+K  NILLD+  +  I+DF +A +      +++   + GT  YM+PE  
Sbjct: 130 YLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR---ETQITTMAGTKPYMAPEMF 186
Query: 651 -AQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWD 695
            +++G  +S   D +S GV   E L  +R     ++ S   + H ++
Sbjct: 187 SSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFE 233

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 50  VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 104
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 105 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 157
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 158 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YVATRWYR 209
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 210 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 252

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 57/94 (60%), Gaps = 10/94 (10%)
Query: 579 IIEGIAQGLLYLHQYSRLRVIHRDLKASNILLD---KDMNPKISDFGMARIFGGDELQSK 635
           I++ +  G  YLH+++   ++HRDLK  N+LL+   +D   KI DFG++  F   E+  K
Sbjct: 109 IMKQVLSGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF---EVGGK 162
Query: 636 TKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLL 669
            K  +GT  Y++PE  ++  +  K DV+S GV+L
Sbjct: 163 MKERLGTAYYIAPEVLRKK-YDEKCDVWSCGVIL 195

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 37  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 91
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 92  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 144
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 145 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTADEMTG----YVATRWYR 196
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 239

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 98/225 (43%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 84
Query: 540 XXXXXXXXXXXXXMPNKSLDFF-------------LFDSTKENLLGWGTRVRIIEGIAQG 586
                         P +SL+ F             L +  K   L       +I  I +G
Sbjct: 85  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRG 137
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-HTDDEMTG----YVATRWYR 189
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 103/227 (45%), Gaps = 43/227 (18%)
Query: 483 LGEGGFGPV---YKGRLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXX 537
           +G G +G V     GR   G +VA+K+L    QS    +    E++L+  ++H N++   
Sbjct: 33  VGSGAYGAVCSAVDGR--TGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVI--- 87
Query: 538 XXXXXXXXXXXXXXXMPNKSLD----FFL---FDST------KENLLGWGTRVRIIEGIA 584
                           P+++LD    F+L   F  T      K   LG      ++  + 
Sbjct: 88  ---------GLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQML 138
Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG 644
           +GL Y+H      +IHRDLK  N+ +++D   KI DFG+AR     +  S+    V T  
Sbjct: 139 KGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR-----QADSEMXGXVVTRW 190
Query: 645 YMSPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           Y +PE     + ++   D++S G ++ E ++ K  T F  ++ L  L
Sbjct: 191 YRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK--TLFKGSDHLDQL 235

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 35  IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 89
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 90  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 142
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 143 LKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-HTDDEMTG----YVATRWYR 194
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 195 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 237

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 57/94 (60%), Gaps = 10/94 (10%)
Query: 579 IIEGIAQGLLYLHQYSRLRVIHRDLKASNILLD---KDMNPKISDFGMARIFGGDELQSK 635
           I++ +  G  YLH+++   ++HRDLK  N+LL+   +D   KI DFG++  F   E+  K
Sbjct: 126 IMKQVLSGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF---EVGGK 179
Query: 636 TKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLL 669
            K  +GT  Y++PE  ++  +  K DV+S GV+L
Sbjct: 180 MKERLGTAYYIAPEVLRKK-YDEKCDVWSCGVIL 212

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 84
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 85  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTGX----VATRWYR 189
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 26  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 80
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 81  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 133
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 134 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YVATRWYR 185
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 186 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 228

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 98/225 (43%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 84
Query: 540 XXXXXXXXXXXXXMPNKSLDFF-------------LFDSTKENLLGWGTRVRIIEGIAQG 586
                         P +SL+ F             L +  K   L       +I  I +G
Sbjct: 85  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRG 137
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YVATRWYR 189
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 27  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 81
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 82  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 134
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 135 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YVATRWYR 186
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 187 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 229

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 27  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 81
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 82  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 134
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 135 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YVATRWYR 186
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 187 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 229

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 35  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 89
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 90  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 142
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 143 LKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-HTDDEMTG----YVATRWYR 194
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 195 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 237

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 36  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 90
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 91  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 143
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 144 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YVATRWYR 195
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 238

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 84
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 85  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YVATRWYR 189
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 28  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 82
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 83  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 135
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 136 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YVATRWYR 187
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 188 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 230

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 37  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 91
Query: 540 XXXXXXXXXXXXXMPNKSLDFF--------LFDSTKENLLGWGTRVR-----IIEGIAQG 586
                         P +SL+ F        L  +   N++            +I  I +G
Sbjct: 92  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 144
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 145 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YVATRWYR 196
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 239

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 84
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 85  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YVATRWYR 189
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           I   L YLH  S   V++RDLK  N++LDKD + KI+DFG+ +   G +  +  K   GT
Sbjct: 257 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGT 312
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSK---RNTDFSNTNSLTLL 690
             Y++PE  +   +    D +  GV++ E +  +    N D      L L+
Sbjct: 313 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM 363

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 112/256 (43%), Gaps = 39/256 (15%)
Query: 452 AANSRTRDSWFPMFSLASVSAATANFSTENKLGEGGFGPVYKG-RLLNGQEVAVKRLSS- 509
            ++S+ R +++      ++      +   + +G G +G V        G  VAVK+LS  
Sbjct: 1   GSHSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP 60
Query: 510 -QSGQGQEEFKNEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKE 568
            QS    +    E++L+  ++H N++                   P +SL+ F       
Sbjct: 61  FQSIIHAKRTYRELRLLKHMKHENVI------------GLLDVFTPARSLEEFNDVYLVT 108
Query: 569 NLLG--WGTRVR-----------IIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMN 615
           +L+G      V+           +I  I +GL Y+H      +IHRDLK SN+ +++D  
Sbjct: 109 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCE 165
Query: 616 PKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGL-FSIKSDVFSFGVLLLETLS 674
            KI DFG+AR    DE+       V T  Y +PE     + ++   D++S G ++ E L+
Sbjct: 166 LKILDFGLAR-HTDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
Query: 675 SKRNTDFSNTNSLTLL 690
            +  T F  T+ +  L
Sbjct: 221 GR--TLFPGTDHIDQL 234

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 84
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 85  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YVATRWYR 189
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 84
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 85  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YVATRWYR 189
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 35  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 89
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 90  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 142
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 143 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YVATRWYR 194
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 195 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 237

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 35  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 89
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 90  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 142
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 143 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YVATRWYR 194
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 195 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 237

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 29  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 83
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 84  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 136
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 137 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YVATRWYR 188
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 189 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 231

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 84
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 85  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YVATRWYR 189
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           I   L YLH  S   V++RDLK  N++LDKD + KI+DFG+ +   G +  +  K   GT
Sbjct: 260 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGT 315
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSK---RNTDFSNTNSLTLL 690
             Y++PE  +   +    D +  GV++ E +  +    N D      L L+
Sbjct: 316 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM 366

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 32  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 86
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 87  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 139
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 140 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YVATRWYR 191
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 192 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 234

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 36  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 90
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 91  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 143
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 144 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YVATRWYR 195
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 238

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 84
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 85  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YVATRWYR 189
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 32  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 86
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 87  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 139
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 140 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YVATRWYR 191
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 192 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 234

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 84
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 85  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YVATRWYR 189
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 42  VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVI----- 96
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 97  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 149
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 150 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YVATRWYR 201
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 202 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 244

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 41  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 95
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 96  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 148
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 149 LKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-HTDDEMTG----YVATRWYR 200
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 201 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 243

>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 90/210 (42%), Gaps = 21/210 (10%)
Query: 480 ENKLGEGGFGPVYKG-RLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQ-HRNLVRXX 537
           E+ LGEG    V     L+  QE AVK +  Q G  +     E++++ + Q HRN++   
Sbjct: 18  EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 538 XXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLR 597
                          M   S+   +      N L       +++ +A  L +LH      
Sbjct: 78  EFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV---VVQDVASALDFLHNKG--- 131
Query: 598 VIHRDLKASNILLDK--DMNP-KISDFGMAR--IFGGDELQSKTKRIV---GTYGYMSPE 649
           + HRDLK  NIL +    ++P KI DFG+       GD     T  ++   G+  YM+PE
Sbjct: 132 IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPE 191
Query: 650 YA-----QQGLFSIKSDVFSFGVLLLETLS 674
                  +  ++  + D++S GV+L   LS
Sbjct: 192 VVEAFSEEASIYDKRCDLWSLGVILYILLS 221

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 22/206 (10%)
Query: 481 NKLGEGGFGPVYKGRLLN-GQEVAVKRL------SSQSGQGQEEFKNEIKLIAKLQHRNL 533
            +LG G F  V K R  + G E A K +      +S+ G  +EE + E+ ++ ++ H N+
Sbjct: 18  EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 534 VRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY 593
           +                  +    L  F F + KE+L         I+ I  G+ YLH  
Sbjct: 78  ITLHDVYENRTDVVLILELVSGGEL--FDFLAQKESL-SEEEATSFIKQILDGVNYLHTK 134
Query: 594 SRLRVIHRDLKASNI-LLDKDM---NPKISDFGMAR-IFGGDELQSKTKRIVGTYGYMSP 648
              ++ H DLK  NI LLDK++   + K+ DFG+A  I  G E     K I GT  +++P
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF----KNIFGTPEFVAP 187
Query: 649 EYAQQGLFSIKSDVFSFGVLLLETLS 674
           E        +++D++S GV+    LS
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLS 213

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 42  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 96
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 97  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 149
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 150 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YVATRWYR 201
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 202 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 244

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 42  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 96
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 97  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 149
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 150 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YVATRWYR 201
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 202 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 244

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 53  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 107
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 108 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 160
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 161 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMXG----YVATRWYR 212
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 213 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 255

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 50  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 104
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 105 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 157
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 158 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YVATRWYR 209
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 210 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 252

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 32  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 86
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 87  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 139
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 140 LKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLAR-HTDDEMTG----YVATRWYR 191
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 192 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 234

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 49  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 103
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 104 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 156
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 157 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YVATRWYR 208
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 209 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 251

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 16/209 (7%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQEV----AVKRLSS----QSGQGQEEFKNEIKLIAK 527
           NF     LG G +G V+  R ++G +     A+K L      Q  +  E  + E +++  
Sbjct: 55  NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 114
Query: 528 LQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGL 587
           ++    +                    N   + F   S +E       ++ + E I   L
Sbjct: 115 IRQSPFLVTLHYAFQTETKLHLILDYINGG-ELFTHLSQRERFTEHEVQIYVGE-IVLAL 172
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
            +LH   +L +I+RD+K  NILLD + +  ++DFG+++ F  DE + +     GT  YM+
Sbjct: 173 EHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE-RAYDFCGTIEYMA 228
Query: 648 PEYAQQG--LFSIKSDVFSFGVLLLETLS 674
           P+  + G        D +S GVL+ E L+
Sbjct: 229 PDIVRGGDSGHDKAVDWWSLGVLMYELLT 257

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 41  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 95
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 96  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 148
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 149 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YVATRWYR 200
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 201 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 243

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 22/206 (10%)
Query: 481 NKLGEGGFGPVYKGRLLN-GQEVAVKRL------SSQSGQGQEEFKNEIKLIAKLQHRNL 533
            +LG G F  V K R  + G E A K +      +S+ G  +EE + E+ ++ ++ H N+
Sbjct: 18  EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 534 VRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY 593
           +                  +    L  F F + KE+L         I+ I  G+ YLH  
Sbjct: 78  ITLHDVYENRTDVVLILELVSGGEL--FDFLAQKESL-SEEEATSFIKQILDGVNYLHTK 134
Query: 594 SRLRVIHRDLKASNI-LLDKDM---NPKISDFGMA-RIFGGDELQSKTKRIVGTYGYMSP 648
              ++ H DLK  NI LLDK++   + K+ DFG+A  I  G E     K I GT  +++P
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF----KNIFGTPEFVAP 187
Query: 649 EYAQQGLFSIKSDVFSFGVLLLETLS 674
           E        +++D++S GV+    LS
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLS 213

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 36  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 90
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 91  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 143
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 144 LKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLAR-HTDDEMTG----YVATRWYR 195
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 238

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           I   L YLH  S   V++RDLK  N++LDKD + KI+DFG+ +   G +  +  K   GT
Sbjct: 119 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGT 174
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSK---RNTDFSNTNSLTLL 690
             Y++PE  +   +    D +  GV++ E +  +    N D      L L+
Sbjct: 175 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM 225

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 53  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 107
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 108 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 160
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+AR    DE+       V T  Y 
Sbjct: 161 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YVATRWYR 212
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 213 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 255

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           I   L YLH  S   V++RDLK  N++LDKD + KI+DFG+ +   G +  +  K   GT
Sbjct: 118 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGT 173
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSK---RNTDFSNTNSLTLL 690
             Y++PE  +   +    D +  GV++ E +  +    N D      L L+
Sbjct: 174 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM 224

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           I   L YLH  S   V++RDLK  N++LDKD + KI+DFG+ +   G +  +  K   GT
Sbjct: 117 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGT 172
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSK---RNTDFSNTNSLTLL 690
             Y++PE  +   +    D +  GV++ E +  +    N D      L L+
Sbjct: 173 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM 223

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 59/110 (53%), Gaps = 17/110 (15%)
Query: 568 ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF 627
           E +LG     ++   I + L YL +  +  VIHRD+K SNILLD+    K+ DFG++   
Sbjct: 123 ERILG-----KMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGIS--- 172
Query: 628 GGDELQSKTK-RIVGTYGYMSPEY-----AQQGLFSIKSDVFSFGVLLLE 671
            G  +  K K R  G   YM+PE        +  + I++DV+S G+ L+E
Sbjct: 173 -GRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVE 221

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 22/206 (10%)
Query: 481 NKLGEGGFGPVYKGRLLN-GQEVAVKRL------SSQSGQGQEEFKNEIKLIAKLQHRNL 533
            +LG G F  V K R  + G E A K +      +S+ G  +EE + E+ ++ ++ H N+
Sbjct: 18  EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 534 VRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY 593
           +                  +    L  F F + KE+L         I+ I  G+ YLH  
Sbjct: 78  ITLHDVYENRTDVVLILELVSGGEL--FDFLAQKESL-SEEEATSFIKQILDGVNYLHTK 134
Query: 594 SRLRVIHRDLKASNI-LLDKDM---NPKISDFGMAR-IFGGDELQSKTKRIVGTYGYMSP 648
              ++ H DLK  NI LLDK++   + K+ DFG+A  I  G E     K I GT  +++P
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF----KNIFGTPEFVAP 187
Query: 649 EYAQQGLFSIKSDVFSFGVLLLETLS 674
           E        +++D++S GV+    LS
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLS 213

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 22/206 (10%)
Query: 481 NKLGEGGFGPVYKGRLLN-GQEVAVKRL------SSQSGQGQEEFKNEIKLIAKLQHRNL 533
            +LG G F  V K R  + G E A K +      +S+ G  +EE + E+ ++ ++ H N+
Sbjct: 18  EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 534 VRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY 593
           +                  +    L  F F + KE+L         I+ I  G+ YLH  
Sbjct: 78  ITLHDVYENRTDVVLILELVSGGEL--FDFLAQKESL-SEEEATSFIKQILDGVNYLHTK 134
Query: 594 SRLRVIHRDLKASNI-LLDKDM---NPKISDFGMA-RIFGGDELQSKTKRIVGTYGYMSP 648
              ++ H DLK  NI LLDK++   + K+ DFG+A  I  G E     K I GT  +++P
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF----KNIFGTPEFVAP 187
Query: 649 EYAQQGLFSIKSDVFSFGVLLLETLS 674
           E        +++D++S GV+    LS
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLS 213

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 13/120 (10%)
Query: 562 LFDSTKENLLGWGTRVR-IIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISD 620
           LFD   E +       R I+  + + + +LH  +   ++HRDLK  NILLD +M  ++SD
Sbjct: 187 LFDYLTEKVALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSD 243
Query: 621 FGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGL------FSIKSDVFSFGVLLLETLS 674
           FG +      E   K + + GT GY++PE  +  +      +  + D+++ GV+L   L+
Sbjct: 244 FGFSCHLEPGE---KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLA 300

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 93/213 (43%), Gaps = 41/213 (19%)
Query: 483 LGEGGFGPV---YKGRLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXX 537
           +G G +G V   Y  RL   Q+VAVK+LS   QS         E++L+  L+H N++   
Sbjct: 36  VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVI--- 90
Query: 538 XXXXXXXXXXXXXXXMPNKSLDFF-------------LFDSTKENLLGWGTRVRIIEGIA 584
                           P  S++ F             L +  K   L       ++  + 
Sbjct: 91  ---------GLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLL 141
Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG 644
           +GL Y+H      +IHRDLK SN+ +++D   +I DFG+AR    DE   +    V T  
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLAR--QADE---EMTGYVATRW 193
Query: 645 YMSPEYAQQGL-FSIKSDVFSFGVLLLETLSSK 676
           Y +PE     + ++   D++S G ++ E L  K
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 52.8 bits (125), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 94/213 (44%), Gaps = 41/213 (19%)
Query: 483 LGEGGFGPV---YKGRLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXX 537
           +G G +G V   Y  RL   Q+VAVK+LS   QS         E++L+  L+H N++   
Sbjct: 28  VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVI--- 82
Query: 538 XXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWG------------TRVR-IIEGIA 584
                           P  S++ F        L+G                V+ ++  + 
Sbjct: 83  ---------GLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLL 133
Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG 644
           +GL Y+H      +IHRDLK SN+ +++D   +I DFG+AR    DE   +    V T  
Sbjct: 134 RGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLAR--QADE---EMTGYVATRW 185
Query: 645 YMSPEYAQQGL-FSIKSDVFSFGVLLLETLSSK 676
           Y +PE     + ++   D++S G ++ E L  K
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 52.8 bits (125), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 84
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 85  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI D+G+AR    DE+       V T  Y 
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDYGLAR-HTDDEMTG----YVATRWYR 189
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 52.8 bits (125), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 22/206 (10%)
Query: 481 NKLGEGGFGPVYKGRLLN-GQEVAVKRL------SSQSGQGQEEFKNEIKLIAKLQHRNL 533
            +LG G F  V K R  + G E A K +      +S+ G  +EE + E+ ++ ++ H N+
Sbjct: 18  EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNI 77
Query: 534 VRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY 593
           +                  +    L  F F + KE+L         I+ I  G+ YLH  
Sbjct: 78  ITLHDVYENRTDVVLILELVSGGEL--FDFLAQKESL-SEEEATSFIKQILDGVNYLHTK 134
Query: 594 SRLRVIHRDLKASNI-LLDKDM---NPKISDFGMA-RIFGGDELQSKTKRIVGTYGYMSP 648
              ++ H DLK  NI LLDK++   + K+ DFG+A  I  G E     K I GT  +++P
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF----KNIFGTPEFVAP 187
Query: 649 EYAQQGLFSIKSDVFSFGVLLLETLS 674
           E        +++D++S GV+    LS
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLS 213

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 22/206 (10%)
Query: 481 NKLGEGGFGPVYKGRLLN-GQEVAVKRL------SSQSGQGQEEFKNEIKLIAKLQHRNL 533
            +LG G F  V K R  + G E A K +      +S+ G  +EE + E+ ++ ++ H N+
Sbjct: 18  EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 534 VRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY 593
           +                  +    L  F F + KE+L         I+ I  G+ YLH  
Sbjct: 78  ITLHDVYENRTDVVLILELVSGGEL--FDFLAQKESL-SEEEATSFIKQILDGVNYLHTK 134
Query: 594 SRLRVIHRDLKASNI-LLDKDM---NPKISDFGMA-RIFGGDELQSKTKRIVGTYGYMSP 648
              ++ H DLK  NI LLDK++   + K+ DFG+A  I  G E     K I GT  +++P
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF----KNIFGTPEFVAP 187
Query: 649 EYAQQGLFSIKSDVFSFGVLLLETLS 674
           E        +++D++S GV+    LS
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLS 213

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 91/204 (44%), Gaps = 26/204 (12%)
Query: 482 KLGEGGFGPVYKGRLLN-GQEVAVKR-LSSQSGQGQEEFK-NEIKLIAKLQHRNLVRXXX 538
           K+GEG +G V+K R  + GQ VA+K+ L S+     ++    EI+++ +L+H NLV    
Sbjct: 10  KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 539 XXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGW---GTRVRIIEGIA----QGLLYLH 591
                              L F   D T  + L     G    +++ I     Q + + H
Sbjct: 70  VFRRKRRL----------HLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCH 119
Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPE-Y 650
           +++    IHRD+K  NIL+ K    K+ DFG AR+  G       +  V T  Y SPE  
Sbjct: 120 KHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDE--VATRWYRSPELL 174
Query: 651 AQQGLFSIKSDVFSFGVLLLETLS 674
                +    DV++ G +  E LS
Sbjct: 175 VGDTQYGPPVDVWAIGCVFAELLS 198

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 97/225 (43%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 84
Query: 540 XXXXXXXXXXXXXMPNKSLDFF-------------LFDSTKENLLGWGTRVRIIEGIAQG 586
                         P +SL+ F             L +  K   L       +I  I +G
Sbjct: 85  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRG 137
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DFG+ R    DE+       V T  Y 
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLCR-HTDDEMTG----YVATRWYR 189
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232

>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ +L   +    IHRDL A NILL      KI DFG+AR    D            
Sbjct: 177 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLP 233
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++ +SDV+S+G+ L E  S
Sbjct: 234 VKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265

>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ +L   +    IHRDL A NILL      KI DFG+AR    D            
Sbjct: 170 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 226
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++ +SDV+S+G+ L E  S
Sbjct: 227 VKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 94/213 (44%), Gaps = 41/213 (19%)
Query: 483 LGEGGFGPV---YKGRLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXX 537
           +G G +G V   Y  RL   Q+VAVK+LS   QS         E++L+  L+H N++   
Sbjct: 36  VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVI--- 90
Query: 538 XXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWG------------TRVR-IIEGIA 584
                           P  S++ F        L+G                V+ ++  + 
Sbjct: 91  ---------GLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLL 141
Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG 644
           +GL Y+H      +IHRDLK SN+ +++D   +I DFG+AR    DE   +    V T  
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLAR--QADE---EMTGYVATRW 193
Query: 645 YMSPEYAQQGL-FSIKSDVFSFGVLLLETLSSK 676
           Y +PE     + ++   D++S G ++ E L  K
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226

>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ +L   +    IHRDL A NILL      KI DFG+AR    D            
Sbjct: 172 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 228
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++ +SDV+S+G+ L E  S
Sbjct: 229 VKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260

>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ +L   +    IHRDL A NILL      KI DFG+AR    D            
Sbjct: 177 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 233
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++ +SDV+S+G+ L E  S
Sbjct: 234 VKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265

>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           +A+G+ +L   +    IHRDL A NILL      KI DFG+AR    D            
Sbjct: 154 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 210
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             +M+PE     +++ +SDV+S+G+ L E  S
Sbjct: 211 VKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 30  VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 84
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 85  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI DF +AR    DE+       V T  Y 
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFYLAR-HTDDEMTG----YVATRWYR 189
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           I+  L YLH+     +I+RDLK  N+LLD + + K++D+GM +   G      T    GT
Sbjct: 130 ISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGT 184
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTD 680
             Y++PE  +   +    D ++ GVL+ E ++ +   D
Sbjct: 185 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222

>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 89/210 (42%), Gaps = 21/210 (10%)
Query: 480 ENKLGEGGFGPVYKG-RLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQ-HRNLVRXX 537
           E+ LGEG    V     L+  QE AVK +  Q G  +     E++++ + Q HRN++   
Sbjct: 18  EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 538 XXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLR 597
                          M   S+   +      N L       +++ +A  L +LH      
Sbjct: 78  EFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV---VVQDVASALDFLHNKG--- 131
Query: 598 VIHRDLKASNILLDK--DMNP-KISDF--GMARIFGGDELQSKTKRIV---GTYGYMSPE 649
           + HRDLK  NIL +    ++P KI DF  G      GD     T  ++   G+  YM+PE
Sbjct: 132 IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPE 191
Query: 650 YA-----QQGLFSIKSDVFSFGVLLLETLS 674
                  +  ++  + D++S GV+L   LS
Sbjct: 192 VVEAFSEEASIYDKRCDLWSLGVILYILLS 221

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           I+  L YLH+     +I+RDLK  N+LLD + + K++D+GM +   G      T    GT
Sbjct: 119 ISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGT 173
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTD 680
             Y++PE  +   +    D ++ GVL+ E ++ +   D
Sbjct: 174 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           I+  L YLH+     +I+RDLK  N+LLD + + K++D+GM +   G      T    GT
Sbjct: 115 ISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGT 169
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTD 680
             Y++PE  +   +    D ++ GVL+ E ++ +   D
Sbjct: 170 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           I+  L YLH+     +I+RDLK  N+LLD + + K++D+GM +   G      T    GT
Sbjct: 162 ISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSTFCGT 216
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTD 680
             Y++PE  +   +    D ++ GVL+ E ++ +   D
Sbjct: 217 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 96/217 (44%), Gaps = 36/217 (16%)
Query: 476 NFSTENKLGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRN 532
            + +   +G G +G V       +G++VA+K+LS   QS    +    E+ L+  +QH N
Sbjct: 25  TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHEN 84
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSL----DFFL----FDSTKENLLGWGTRVRIIEGIA 584
           ++                   P  SL    DF+L      +  + ++G       I+ + 
Sbjct: 85  VI------------GLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLV 132
Query: 585 ----QGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIV 640
               +GL Y+H      V+HRDLK  N+ +++D   KI DFG+AR        ++    V
Sbjct: 133 YQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR-----HADAEMTGYV 184
Query: 641 GTYGYMSPEYAQQGL-FSIKSDVFSFGVLLLETLSSK 676
            T  Y +PE     + ++   D++S G ++ E L+ K
Sbjct: 185 VTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 27/212 (12%)
Query: 475 ANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKN-EIKLIAKLQHRN 532
            +++    +G G FG VY+ +L + G+ VA+K++     QG+  FKN E++++ KL H N
Sbjct: 20  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QGK-AFKNRELQIMRKLDHCN 74
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFL---------FDSTKENLLGWGTRVRIIEGI 583
           +VR                   N  LD+           +   K+ L     ++ + + +
Sbjct: 75  IVRLRYFFYSSGEKKDEVYL--NLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQ-L 131
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNP-KISDFGMARIFGGDELQSKTKRIVGT 642
            + L Y+H +    + HRD+K  N+LLD D    K+ DFG A+     E       I   
Sbjct: 132 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR 186
Query: 643 YGYMSPEYAQQGL-FSIKSDVFSFGVLLLETL 673
           Y Y +PE       ++   DV+S G +L E L
Sbjct: 187 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELL 217

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 14/205 (6%)
Query: 476 NFSTENKLGEGGFGPVYK-GRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
           ++    +LG G FG V++      G   A K + +     +E  + EI+ ++ L+H  LV
Sbjct: 158 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLV 217
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
                             M    L  F   + + N +     V  +  + +GL ++H+ +
Sbjct: 218 NLHDAFEDDNEMVMIYEFMSGGEL--FEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN 275
Query: 595 RLRVIHRDLKASNILL--DKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ 652
               +H DLK  NI+    +    K+ DFG+      D  QS  K   GT  + +PE A+
Sbjct: 276 ---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHL--DPKQS-VKVTTGTAEFAAPEVAE 329
Query: 653 QGLFSIKSDVFSFGVL---LLETLS 674
                  +D++S GVL   LL  LS
Sbjct: 330 GKPVGYYTDMWSVGVLSYILLSGLS 354

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 96/217 (44%), Gaps = 36/217 (16%)
Query: 476 NFSTENKLGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRN 532
            + +   +G G +G V       +G++VA+K+LS   QS    +    E+ L+  +QH N
Sbjct: 43  TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHEN 102
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSL----DFFL----FDSTKENLLGWGTRVRIIEGIA 584
           ++                   P  SL    DF+L      +  + ++G       I+ + 
Sbjct: 103 VI------------GLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLV 150
Query: 585 ----QGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIV 640
               +GL Y+H      V+HRDLK  N+ +++D   KI DFG+AR        ++    V
Sbjct: 151 YQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR-----HADAEMTGYV 202
Query: 641 GTYGYMSPEYAQQGL-FSIKSDVFSFGVLLLETLSSK 676
            T  Y +PE     + ++   D++S G ++ E L+ K
Sbjct: 203 VTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 77/315 (24%), Positives = 126/315 (40%), Gaps = 43/315 (13%)
Query: 483 LGEGGFGPVYKGRLLN---GQEVAVK-----RLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
           +G+G F  V   R +N   GQ+ AVK     + +S  G   E+ K E  +   L+H ++V
Sbjct: 32  IGKGPFSVVR--RCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLL-GWGTRVRIIEGIAQGLLYLHQY 593
                             M    L F +        +         +  I + L Y H  
Sbjct: 90  ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN 149
Query: 594 SRLRVIHRDLKASNILLDKDMNP---KISDFGMARIFGGDELQSKTKRIVGTYGYMSPEY 650
           +   +IHRD+K   +LL    N    K+  FG+A   G   L +  +  VGT  +M+PE 
Sbjct: 150 N---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR--VGTPHFMAPEV 204
Query: 651 AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWK-DDRAWELIDPT 709
            ++  +    DV+  GV+L   LS      F  T      G     +K + R W  I   
Sbjct: 205 VKREPYGKPVDVWGCGVILFILLSG--CLPFYGTKERLFEGIIKGKYKMNPRQWSHI--- 259
Query: 710 LQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK-------TINLPHPRQP-- 760
             +E++  ++ R + +       D A+R T++E ++    K        I+LP   +   
Sbjct: 260 --SESAKDLVRRMLML-------DPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLR 310
Query: 761 AFSSIRGLKNTILPA 775
            F++ R LK  +L A
Sbjct: 311 KFNARRKLKGAVLAA 325

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 27/212 (12%)
Query: 475 ANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKN-EIKLIAKLQHRN 532
            +++    +G G FG VY+ +L + G+ VA+K++     QG+  FKN E++++ KL H N
Sbjct: 20  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QGK-AFKNRELQIMRKLDHCN 74
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFL---------FDSTKENLLGWGTRVRIIEGI 583
           +VR                   N  LD+           +   K+ L     ++ + + +
Sbjct: 75  IVRLRYFFYSSGEKKDEVYL--NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-L 131
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNP-KISDFGMARIFGGDELQSKTKRIVGT 642
            + L Y+H +    + HRD+K  N+LLD D    K+ DFG A+     E       I   
Sbjct: 132 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSR 186
Query: 643 YGYMSPEYAQQGL-FSIKSDVFSFGVLLLETL 673
           Y Y +PE       ++   DV+S G +L E L
Sbjct: 187 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELL 217

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 8/111 (7%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           I   L YLH      V++RD+K  N++LDKD + KI+DFG+ +    D    KT    GT
Sbjct: 114 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGT 168
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSK---RNTDFSNTNSLTLL 690
             Y++PE  +   +    D +  GV++ E +  +    N D      L L+
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 219

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 84
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 85  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI  FG+AR    DE+       V T  Y 
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILGFGLAR-HTDDEMTG----YVATRWYR 189
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 77/315 (24%), Positives = 126/315 (40%), Gaps = 43/315 (13%)
Query: 483 LGEGGFGPVYKGRLLN---GQEVAVK-----RLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
           +G+G F  V   R +N   GQ+ AVK     + +S  G   E+ K E  +   L+H ++V
Sbjct: 34  IGKGPFSVVR--RCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 91
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLL-GWGTRVRIIEGIAQGLLYLHQY 593
                             M    L F +        +         +  I + L Y H  
Sbjct: 92  ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN 151
Query: 594 SRLRVIHRDLKASNILLDKDMNP---KISDFGMARIFGGDELQSKTKRIVGTYGYMSPEY 650
           +   +IHRD+K   +LL    N    K+  FG+A   G   L +  +  VGT  +M+PE 
Sbjct: 152 N---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR--VGTPHFMAPEV 206
Query: 651 AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWK-DDRAWELIDPT 709
            ++  +    DV+  GV+L   LS      F  T      G     +K + R W  I   
Sbjct: 207 VKREPYGKPVDVWGCGVILFILLSG--CLPFYGTKERLFEGIIKGKYKMNPRQWSHI--- 261
Query: 710 LQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK-------TINLPHPRQP-- 760
             +E++  ++ R + +       D A+R T++E ++    K        I+LP   +   
Sbjct: 262 --SESAKDLVRRMLML-------DPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLR 312
Query: 761 AFSSIRGLKNTILPA 775
            F++ R LK  +L A
Sbjct: 313 KFNARRKLKGAVLAA 327

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 8/111 (7%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           I   L YLH      V++RD+K  N++LDKD + KI+DFG+ +   G    +  K   GT
Sbjct: 114 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGT 168
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSK---RNTDFSNTNSLTLL 690
             Y++PE  +   +    D +  GV++ E +  +    N D      L L+
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 219

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 27/212 (12%)
Query: 475 ANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKN-EIKLIAKLQHRN 532
            +++    +G G FG VY+ +L + G+ VA+K++     QG+  FKN E++++ KL H N
Sbjct: 20  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QGK-AFKNRELQIMRKLDHCN 74
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFL---------FDSTKENLLGWGTRVRIIEGI 583
           +VR                   N  LD+           +   K+ L     ++ + + +
Sbjct: 75  IVRLRYFFYSSGEKKDEVYL--NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-L 131
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNP-KISDFGMARIFGGDELQSKTKRIVGT 642
            + L Y+H +    + HRD+K  N+LLD D    K+ DFG A+     E       I   
Sbjct: 132 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSR 186
Query: 643 YGYMSPEYAQQGL-FSIKSDVFSFGVLLLETL 673
           Y Y +PE       ++   DV+S G +L E L
Sbjct: 187 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELL 217

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 8/111 (7%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           I   L YLH      V++RD+K  N++LDKD + KI+DFG+ +   G    +  K   GT
Sbjct: 119 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGT 173
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSK---RNTDFSNTNSLTLL 690
             Y++PE  +   +    D +  GV++ E +  +    N D      L L+
Sbjct: 174 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 224

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 475 ANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKN-EIKLIAKLQHRN 532
            +++    +G G FG VY+ +L + G+ VA+K++        + FKN E++++ KL H N
Sbjct: 28  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCN 82
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFL---------FDSTKENLLGWGTRVRIIEGI 583
           +VR                   N  LD+           +   K+ L     ++ + + +
Sbjct: 83  IVRLRYFFYSSGEKKDEVYL--NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-L 139
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNP-KISDFGMARIFGGDELQSKTKRIVGT 642
            + L Y+H +    + HRD+K  N+LLD D    K+ DFG A+     E       I   
Sbjct: 140 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR 194
Query: 643 YGYMSPEYAQQGL-FSIKSDVFSFGVLLLETL 673
           Y Y +PE       ++   DV+S G +L E L
Sbjct: 195 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELL 225

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 475 ANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKN-EIKLIAKLQHRN 532
            +++    +G G FG VY+ +L + G+ VA+K++        + FKN E++++ KL H N
Sbjct: 20  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCN 74
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFL---------FDSTKENLLGWGTRVRIIEGI 583
           +VR                   N  LD+           +   K+ L     ++ + + +
Sbjct: 75  IVRLRYFFYSSGEKKDVVYL--NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-L 131
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNP-KISDFGMARIFGGDELQSKTKRIVGT 642
            + L Y+H +    + HRD+K  N+LLD D    K+ DFG A+     E       I   
Sbjct: 132 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR 186
Query: 643 YGYMSPEYAQQGL-FSIKSDVFSFGVLLLETL 673
           Y Y +PE       ++   DV+S G +L E L
Sbjct: 187 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELL 217

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 475 ANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKN-EIKLIAKLQHRN 532
            +++    +G G FG VY+ +L + G+ VA+K++        + FKN E++++ KL H N
Sbjct: 39  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCN 93
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFL---------FDSTKENLLGWGTRVRIIEGI 583
           +VR                   N  LD+           +   K+ L     ++ + + +
Sbjct: 94  IVRLRYFFYSSGEKKDEVYL--NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-L 150
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNP-KISDFGMARIFGGDELQSKTKRIVGT 642
            + L Y+H +    + HRD+K  N+LLD D    K+ DFG A+     E       I   
Sbjct: 151 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR 205
Query: 643 YGYMSPEYAQQGL-FSIKSDVFSFGVLLLETL 673
           Y Y +PE       ++   DV+S G +L E L
Sbjct: 206 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELL 236

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 483 LGEGGFGPVYKGRL-LNGQEVAVKRLSSQSG--QGQEEFKNEIKLIAKLQHRNLV----- 534
           +G G +G V   R  L GQ+VA+K++ +        +    E+K++   +H N++     
Sbjct: 63  IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 122
Query: 535 -RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY 593
            R                 M +   D      + + L     R  + + + +GL Y+H  
Sbjct: 123 LRPTVPYGEFKSVYVVLDLMES---DLHQIIHSSQPLTLEHVRYFLYQ-LLRGLKYMHS- 177
Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMARIF--GGDELQSKTKRIVGTYGYMSPEYA 651
              +VIHRDLK SN+L++++   KI DFGMAR       E Q      V T  Y +PE  
Sbjct: 178 --AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELM 235
Query: 652 -QQGLFSIKSDVFSFGVLLLETLSSKR 677
                ++   D++S G +  E L+ ++
Sbjct: 236 LSLHEYTQAIDLWSVGCIFGEMLARRQ 262

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 475 ANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKN-EIKLIAKLQHRN 532
            +++    +G G FG VY+ +L + G+ VA+K++        + FKN E++++ KL H N
Sbjct: 33  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCN 87
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFL---------FDSTKENLLGWGTRVRIIEGI 583
           +VR                   N  LD+           +   K+ L     ++ + + +
Sbjct: 88  IVRLRYFFYSSGEKKDEVYL--NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-L 144
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNP-KISDFGMARIFGGDELQSKTKRIVGT 642
            + L Y+H +    + HRD+K  N+LLD D    K+ DFG A+     E       I   
Sbjct: 145 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSR 199
Query: 643 YGYMSPEYAQQGL-FSIKSDVFSFGVLLLETL 673
           Y Y +PE       ++   DV+S G +L E L
Sbjct: 200 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELL 230

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 475 ANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKN-EIKLIAKLQHRN 532
            +++    +G G FG VY+ +L + G+ VA+K++        + FKN E++++ KL H N
Sbjct: 48  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCN 102
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFL---------FDSTKENLLGWGTRVRIIEGI 583
           +VR                   N  LD+           +   K+ L     ++ + + +
Sbjct: 103 IVRLRYFFYSSGEKKDEVYL--NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-L 159
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNP-KISDFGMARIFGGDELQSKTKRIVGT 642
            + L Y+H +    + HRD+K  N+LLD D    K+ DFG A+     E       I   
Sbjct: 160 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSR 214
Query: 643 YGYMSPEYAQQGL-FSIKSDVFSFGVLLLETL 673
           Y Y +PE       ++   DV+S G +L E L
Sbjct: 215 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELL 245

>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 25/207 (12%)
Query: 482 KLGEGGFGPVYKGRLLNGQ---EVAVKRLSSQ--SGQGQEEFKNEIKLIAKLQHRNLVRX 536
           ++G G F  VYKG  L+ +   EVA   L  +  +   ++ FK E + +  LQH N+VR 
Sbjct: 33  EIGRGSFKTVYKG--LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRF 90
Query: 537 ----XXXXXXXXXXXXXXXXMPNKSLDFFL--FDSTKENLLGWGTRVRIIEGIAQGLLYL 590
                                 + +L  +L  F   K  +L    R      I +GL +L
Sbjct: 91  YDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCR-----QILKGLQFL 145
Query: 591 HQYSRLRVIHRDLKASNILLDKDMNP-KISDFGMARIFGGDELQSKTKRIVGTYGYMSPE 649
           H  +   +IHRDLK  NI +       KI D G+A +    +  S  K ++GT  + +PE
Sbjct: 146 HTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLATL----KRASFAKAVIGTPEFXAPE 200
Query: 650 YAQQGLFSIKSDVFSFGVLLLETLSSK 676
             ++  +    DV++FG   LE  +S+
Sbjct: 201 XYEEK-YDESVDVYAFGXCXLEXATSE 226

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 84
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 85  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI D G+AR    DE+       V T  Y 
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDAGLAR-HTDDEMTG----YVATRWYR 189
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 475 ANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKN-EIKLIAKLQHRN 532
            +++    +G G FG VY+ +L + G+ VA+K++        + FKN E++++ KL H N
Sbjct: 21  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCN 75
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFL---------FDSTKENLLGWGTRVRIIEGI 583
           +VR                   N  LD+           +   K+ L     ++ + + +
Sbjct: 76  IVRLRYFFYSSGEKKDEVYL--NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-L 132
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNP-KISDFGMARIFGGDELQSKTKRIVGT 642
            + L Y+H +    + HRD+K  N+LLD D    K+ DFG A+     E       I   
Sbjct: 133 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR 187
Query: 643 YGYMSPEYAQQGL-FSIKSDVFSFGVLLLETL 673
           Y Y +PE       ++   DV+S G +L E L
Sbjct: 188 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELL 218

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 475 ANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKN-EIKLIAKLQHRN 532
            +++    +G G FG VY+ +L + G+ VA+K++        + FKN E++++ KL H N
Sbjct: 20  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCN 74
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFL---------FDSTKENLLGWGTRVRIIEGI 583
           +VR                   N  LD+           +   K+ L     ++ + + +
Sbjct: 75  IVRLRYFFYSSGEKKDEVYL--NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-L 131
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNP-KISDFGMARIFGGDELQSKTKRIVGT 642
            + L Y+H +    + HRD+K  N+LLD D    K+ DFG A+     E       I   
Sbjct: 132 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR 186
Query: 643 YGYMSPEYAQQGL-FSIKSDVFSFGVLLLETL 673
           Y Y +PE       ++   DV+S G +L E L
Sbjct: 187 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELL 217

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 8/111 (7%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           I   L YLH      V++RD+K  N++LDKD + KI+DFG+ +    D    KT    GT
Sbjct: 117 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGT 171
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSK---RNTDFSNTNSLTLL 690
             Y++PE  +   +    D +  GV++ E +  +    N D      L L+
Sbjct: 172 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 222

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 475 ANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKN-EIKLIAKLQHRN 532
            +++    +G G FG VY+ +L + G+ VA+K++        + FKN E++++ KL H N
Sbjct: 24  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCN 78
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFL---------FDSTKENLLGWGTRVRIIEGI 583
           +VR                   N  LD+           +   K+ L     ++ + + +
Sbjct: 79  IVRLRYFFYSSGEKKDEVYL--NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-L 135
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNP-KISDFGMARIFGGDELQSKTKRIVGT 642
            + L Y+H +    + HRD+K  N+LLD D    K+ DFG A+     E       I   
Sbjct: 136 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR 190
Query: 643 YGYMSPEYAQQGL-FSIKSDVFSFGVLLLETL 673
           Y Y +PE       ++   DV+S G +L E L
Sbjct: 191 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELL 221

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 475 ANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKN-EIKLIAKLQHRN 532
            +++    +G G FG VY+ +L + G+ VA+K++        + FKN E++++ KL H N
Sbjct: 20  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCN 74
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFL---------FDSTKENLLGWGTRVRIIEGI 583
           +VR                   N  LD+           +   K+ L     ++ + + +
Sbjct: 75  IVRLRYFFYSSGEKKDEVYL--NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-L 131
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNP-KISDFGMARIFGGDELQSKTKRIVGT 642
            + L Y+H +    + HRD+K  N+LLD D    K+ DFG A+     E       I   
Sbjct: 132 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR 186
Query: 643 YGYMSPEYAQQGL-FSIKSDVFSFGVLLLETL 673
           Y Y +PE       ++   DV+S G +L E L
Sbjct: 187 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELL 217

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 8/111 (7%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           I   L YLH      V++RD+K  N++LDKD + KI+DFG+ +    D    KT    GT
Sbjct: 114 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGT 168
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSK---RNTDFSNTNSLTLL 690
             Y++PE  +   +    D +  GV++ E +  +    N D      L L+
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 219

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 14/205 (6%)
Query: 476 NFSTENKLGEGGFGPVYK-GRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
           ++    +LG G FG V++      G   A K + +     +E  + EI+ ++ L+H  LV
Sbjct: 52  HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLV 111
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
                             M    L  F   + + N +     V  +  + +GL ++H+ +
Sbjct: 112 NLHDAFEDDNEMVMIYEFMSGGEL--FEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN 169
Query: 595 RLRVIHRDLKASNILL--DKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ 652
               +H DLK  NI+    +    K+ DFG+      D  QS  K   GT  + +PE A+
Sbjct: 170 ---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHL--DPKQS-VKVTTGTAEFAAPEVAE 223
Query: 653 QGLFSIKSDVFSFGVL---LLETLS 674
                  +D++S GVL   LL  LS
Sbjct: 224 GKPVGYYTDMWSVGVLSYILLSGLS 248

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 475 ANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKN-EIKLIAKLQHRN 532
            +++    +G G FG VY+ +L + G+ VA+K++        + FKN E++++ KL H N
Sbjct: 25  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCN 79
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFL---------FDSTKENLLGWGTRVRIIEGI 583
           +VR                   N  LD+           +   K+ L     ++ + + +
Sbjct: 80  IVRLRYFFYSSGEKKDEVYL--NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-L 136
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNP-KISDFGMARIFGGDELQSKTKRIVGT 642
            + L Y+H +    + HRD+K  N+LLD D    K+ DFG A+     E       I   
Sbjct: 137 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSR 191
Query: 643 YGYMSPEYAQQGL-FSIKSDVFSFGVLLLETL 673
           Y Y +PE       ++   DV+S G +L E L
Sbjct: 192 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELL 222

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 475 ANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKN-EIKLIAKLQHRN 532
            +++    +G G FG VY+ +L + G+ VA+K++        + FKN E++++ KL H N
Sbjct: 54  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCN 108
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFL---------FDSTKENLLGWGTRVRIIEGI 583
           +VR                   N  LD+           +   K+ L     ++ + + +
Sbjct: 109 IVRLRYFFYSSGEKKDEVYL--NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-L 165
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNP-KISDFGMARIFGGDELQSKTKRIVGT 642
            + L Y+H +    + HRD+K  N+LLD D    K+ DFG A+     E       I   
Sbjct: 166 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR 220
Query: 643 YGYMSPEYAQQGL-FSIKSDVFSFGVLLLETL 673
           Y Y +PE       ++   DV+S G +L E L
Sbjct: 221 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELL 251

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 475 ANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKN-EIKLIAKLQHRN 532
            +++    +G G FG VY+ +L + G+ VA+K++        + FKN E++++ KL H N
Sbjct: 32  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCN 86
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFL---------FDSTKENLLGWGTRVRIIEGI 583
           +VR                   N  LD+           +   K+ L     ++ + + +
Sbjct: 87  IVRLRYFFYSSGEKKDEVYL--NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-L 143
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNP-KISDFGMARIFGGDELQSKTKRIVGT 642
            + L Y+H +    + HRD+K  N+LLD D    K+ DFG A+     E       I   
Sbjct: 144 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR 198
Query: 643 YGYMSPEYAQQGL-FSIKSDVFSFGVLLLETL 673
           Y Y +PE       ++   DV+S G +L E L
Sbjct: 199 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELL 229

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 87/203 (42%), Gaps = 20/203 (9%)
Query: 483 LGEGGFGPVYKGRLLNG--------QEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
           LG+GG+G V++ R + G         +V  K +  ++ +     K E  ++ +++H  +V
Sbjct: 25  LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
                             +    L        +E +    T    +  I+  L +LHQ  
Sbjct: 85  DLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFMEDTACFYLAEISMALGHLHQKG 141
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMAR--IFGGDELQSKTKRIVGTYGYMSPEYAQ 652
              +I+RDLK  NI+L+   + K++DFG+ +  I  G    + T    GT  YM+PE   
Sbjct: 142 ---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG----TVTHXFCGTIEYMAPEILM 194
Query: 653 QGLFSIKSDVFSFGVLLLETLSS 675
           +   +   D +S G L+ + L+ 
Sbjct: 195 RSGHNRAVDWWSLGALMYDMLTG 217

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 8/111 (7%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           I   L YLH      V++RD+K  N++LDKD + KI+DFG+ +   G    +  K   GT
Sbjct: 114 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGT 168
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSK---RNTDFSNTNSLTLL 690
             Y++PE  +   +    D +  GV++ E +  +    N D      L L+
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 219

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 90/214 (42%), Gaps = 27/214 (12%)
Query: 479 TENKLGEGGFGPVYKG-RLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQ-HRNLVRX 536
           T   LGEG +  V     L NG+E AVK +  Q+G  +     E++ + + Q ++N++  
Sbjct: 17  TSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILEL 76
Query: 537 XXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRL 596
                           +   S+   L    K+         R++  +A  L +LH     
Sbjct: 77  IEFFEDDTRFYLVFEKLQGGSI---LAHIQKQKHFNEREASRVVRDVAAALDFLHTKG-- 131
Query: 597 RVIHRDLKASNILLD--KDMNP-KISDFGMARIFGGDELQSKTKRIV--------GTYGY 645
            + HRDLK  NIL +  + ++P KI DF +     G +L +    I         G+  Y
Sbjct: 132 -IAHRDLKPENILCESPEKVSPVKICDFDLG---SGMKLNNSCTPITTPELTTPCGSAEY 187
Query: 646 MSPEYA-----QQGLFSIKSDVFSFGVLLLETLS 674
           M+PE       Q   +  + D++S GV+L   LS
Sbjct: 188 MAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLS 221

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 8/111 (7%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           I   L YLH      V++RD+K  N++LDKD + KI+DFG+ +   G    +  K   GT
Sbjct: 114 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGT 168
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSK---RNTDFSNTNSLTLL 690
             Y++PE  +   +    D +  GV++ E +  +    N D      L L+
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 219

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 475 ANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKN-EIKLIAKLQHRN 532
            +++    +G G FG VY+ +L + G+ VA+K++        + FKN E++++ KL H N
Sbjct: 32  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCN 86
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFL---------FDSTKENLLGWGTRVRIIEGI 583
           +VR                   N  LD+           +   K+ L     ++ + + +
Sbjct: 87  IVRLRYFFYSSGEKKDEVYL--NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-L 143
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNP-KISDFGMARIFGGDELQSKTKRIVGT 642
            + L Y+H +    + HRD+K  N+LLD D    K+ DFG A+     E       I   
Sbjct: 144 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR 198
Query: 643 YGYMSPEYAQQGL-FSIKSDVFSFGVLLLETL 673
           Y Y +PE       ++   DV+S G +L E L
Sbjct: 199 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELL 229

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 475 ANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKN-EIKLIAKLQHRN 532
            +++    +G G FG VY+ +L + G+ VA+K++        + FKN E++++ KL H N
Sbjct: 54  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCN 108
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFL---------FDSTKENLLGWGTRVRIIEGI 583
           +VR                   N  LD+           +   K+ L     ++ + + +
Sbjct: 109 IVRLRYFFYSSGEKKDEVYL--NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-L 165
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNP-KISDFGMARIFGGDELQSKTKRIVGT 642
            + L Y+H +    + HRD+K  N+LLD D    K+ DFG A+     E       I   
Sbjct: 166 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSR 220
Query: 643 YGYMSPEYAQQGL-FSIKSDVFSFGVLLLETL 673
           Y Y +PE       ++   DV+S G +L E L
Sbjct: 221 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELL 251

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 87/203 (42%), Gaps = 20/203 (9%)
Query: 483 LGEGGFGPVYKGRLLNG--------QEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
           LG+GG+G V++ R + G         +V  K +  ++ +     K E  ++ +++H  +V
Sbjct: 25  LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 535 RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
                             +    L        +E +    T    +  I+  L +LHQ  
Sbjct: 85  DLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFMEDTACFYLAEISMALGHLHQKG 141
Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMAR--IFGGDELQSKTKRIVGTYGYMSPEYAQ 652
              +I+RDLK  NI+L+   + K++DFG+ +  I  G    + T    GT  YM+PE   
Sbjct: 142 ---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG----TVTHTFCGTIEYMAPEILM 194
Query: 653 QGLFSIKSDVFSFGVLLLETLSS 675
           +   +   D +S G L+ + L+ 
Sbjct: 195 RSGHNRAVDWWSLGALMYDMLTG 217

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 85/209 (40%), Gaps = 14/209 (6%)
Query: 474 TANFSTENKLGEGGFGPVYKG-RLLNGQEVAVKRLSS-QSGQGQEEFKNEIKLIAKLQHR 531
           +++F  ++ LGEG +G V        G+ VA+K++              EIK++   +H 
Sbjct: 10  SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 532 NLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH 591
           N++                  +  + +   L       +L        I    + +  LH
Sbjct: 70  NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL--------QSKTKRIVGTY 643
             +   VIHRDLK SN+L++ + + K+ DFG+ARI              QS     V T 
Sbjct: 130 GSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATR 186
Query: 644 GYMSPEYA-QQGLFSIKSDVFSFGVLLLE 671
            Y +PE       +S   DV+S G +L E
Sbjct: 187 WYRAPEVMLTSAKYSRAMDVWSCGCILAE 215

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 475 ANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKN-EIKLIAKLQHRN 532
            +++    +G G FG VY+ +L + G+ VA+K++        + FKN E++++ KL H N
Sbjct: 20  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCN 74
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFL---------FDSTKENLLGWGTRVRIIEGI 583
           +VR                   N  LD+           +   K+ L     ++ + + +
Sbjct: 75  IVRLRYFFYSSGEKKDEVYL--NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-L 131
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNP-KISDFGMARIFGGDELQSKTKRIVGT 642
            + L Y+H +    + HRD+K  N+LLD D    K+ DFG A+     E       I   
Sbjct: 132 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSR 186
Query: 643 YGYMSPEYAQQGL-FSIKSDVFSFGVLLLETL 673
           Y Y +PE       ++   DV+S G +L E L
Sbjct: 187 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELL 217

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 475 ANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKN-EIKLIAKLQHRN 532
            +++    +G G FG VY+ +L + G+ VA+K++        + FKN E++++ KL H N
Sbjct: 56  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCN 110
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFL---------FDSTKENLLGWGTRVRIIEGI 583
           +VR                   N  LD+           +   K+ L     ++ + + +
Sbjct: 111 IVRLRYFFYSSGEKKDEVYL--NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-L 167
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNP-KISDFGMARIFGGDELQSKTKRIVGT 642
            + L Y+H +    + HRD+K  N+LLD D    K+ DFG A+     E       I   
Sbjct: 168 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSR 222
Query: 643 YGYMSPEYAQQGL-FSIKSDVFSFGVLLLETL 673
           Y Y +PE       ++   DV+S G +L E L
Sbjct: 223 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELL 253

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 483 LGEGGFGPVYKGRL-LNGQEVAVKRLSSQSG--QGQEEFKNEIKLIAKLQHRNLV----- 534
           +G G +G V   R  L GQ+VA+K++ +        +    E+K++   +H N++     
Sbjct: 62  IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 535 -RXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY 593
            R                 M +   D      + + L     R  + + + +GL Y+H  
Sbjct: 122 LRPTVPYGEFKSVYVVLDLMES---DLHQIIHSSQPLTLEHVRYFLYQ-LLRGLKYMHS- 176
Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMARIF--GGDELQSKTKRIVGTYGYMSPEYA 651
              +VIHRDLK SN+L++++   KI DFGMAR       E Q      V T  Y +PE  
Sbjct: 177 --AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELM 234
Query: 652 -QQGLFSIKSDVFSFGVLLLETLSSKR 677
                ++   D++S G +  E L+ ++
Sbjct: 235 LSLHEYTQAIDLWSVGCIFGEMLARRQ 261

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 84
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 85  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI D G+AR    DE+       V T  Y 
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDRGLAR-HTDDEMTG----YVATRWYR 189
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 83/196 (42%), Gaps = 12/196 (6%)
Query: 483 LGEGGFGPVYKGRLLN----GQEVAVKRLSS-QSGQGQEEFKNEIKLIAKLQHRNLVRXX 537
           +GEG FG V++G  ++       VA+K   +  S   +E+F  E   + +  H ++V+  
Sbjct: 18  IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 538 XXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLR 597
                             +   F      ++  L   + +     ++  L YL      R
Sbjct: 78  GVITENPVWIIMELCTLGELRSFL---QVRKFSLDLASLILYAYQLSTALAYLESK---R 131
Query: 598 VIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFS 657
            +HRD+ A N+L+  +   K+ DFG++R +  D    K  +      +M+PE      F+
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTXXKASKGKLPIKWMAPESINFRRFT 190
Query: 658 IKSDVFSFGVLLLETL 673
             SDV+ FGV + E L
Sbjct: 191 SASDVWMFGVCMWEIL 206

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 475 ANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKN-EIKLIAKLQHRN 532
            +++    +G G FG VY+ +L + G+ VA+K++        + FKN E++++ KL H N
Sbjct: 58  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCN 112
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFL---------FDSTKENLLGWGTRVRIIEGI 583
           +VR                   N  LD+           +   K+ L     ++ + + +
Sbjct: 113 IVRLRYFFYSSGEKKDEVYL--NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-L 169
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNP-KISDFGMARIFGGDELQSKTKRIVGT 642
            + L Y+H +    + HRD+K  N+LLD D    K+ DFG A+     E       I   
Sbjct: 170 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSR 224
Query: 643 YGYMSPEYAQQGL-FSIKSDVFSFGVLLLETL 673
           Y Y +PE       ++   DV+S G +L E L
Sbjct: 225 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELL 255

>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 65/292 (22%), Positives = 118/292 (40%), Gaps = 39/292 (13%)
Query: 483 LGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQE--EFKNEIKLIAKLQHRNLVRXXXXX 540
           +G+G FG VY GR     EVA++ +  +     +   FK E+    + +H N+V      
Sbjct: 41  IGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC 98
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIH 600
                          ++L   + D+  + +L      +I + I +G+ YLH      ++H
Sbjct: 99  MSPPHLAIITSLCKGRTLYSVVRDA--KIVLDVNKTRQIAQEIVKGMGYLHAKG---ILH 153
Query: 601 RDLKASNILLDKDMNPKISDFGMARIFG---GDELQSKTKRIVGTYGYMSPEYAQQ---- 653
           +DLK+ N+  D +    I+DFG+  I G       + K +   G   +++PE  +Q    
Sbjct: 154 KDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPD 212
Query: 654 -----GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP 708
                  FS  SDVF+ G +  E  +  R   F    +  ++            W++   
Sbjct: 213 TEEDKLPFSKHSDVFALGTIWYELHA--REWPFKTQPAEAII------------WQMGTG 258
Query: 709 TLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT---NKTINLPHP 757
              N +   +     ++ L C   +  +RPT  +++ ML     +   L HP
Sbjct: 259 MKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRRLSHP 310

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 14/213 (6%)
Query: 470 VSAATANFSTENKLGEGGFGPVYKG-RLLNGQEVAVKRLSS-QSGQGQEEFKNEIKLIAK 527
           V   +++F  ++ LGEG +G V        G+ VA+K++              EIK++  
Sbjct: 6   VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKH 65
Query: 528 LQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGL 587
            +H N++                  +  + +   L       +L        I    + +
Sbjct: 66  FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAV 125
Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL--------QSKTKRI 639
             LH  +   VIHRDLK SN+L++ + + K+ DFG+ARI              QS     
Sbjct: 126 KVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEY 182
Query: 640 VGTYGYMSPEYA-QQGLFSIKSDVFSFGVLLLE 671
           V T  Y +PE       +S   DV+S G +L E
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAE 215

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 475 ANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKN-EIKLIAKLQHRN 532
            +++    +G G FG VY+ +L + G+ VA+K++        + FKN E++++ KL H N
Sbjct: 99  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCN 153
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFL---------FDSTKENLLGWGTRVRIIEGI 583
           +VR                   N  LD+           +   K+ L     ++ + + +
Sbjct: 154 IVRLRYFFYSSGEKKDEVYL--NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-L 210
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNP-KISDFGMARIFGGDELQSKTKRIVGT 642
            + L Y+H +    + HRD+K  N+LLD D    K+ DFG A+     E       I   
Sbjct: 211 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSR 265
Query: 643 YGYMSPEYAQQGL-FSIKSDVFSFGVLLLETL 673
           Y Y +PE       ++   DV+S G +L E L
Sbjct: 266 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELL 296

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 93/229 (40%), Gaps = 50/229 (21%)
Query: 482 KLGEGGFGPVYKG-RLLNGQEVAVKRLS---SQSGQGQEEFKNEIKLIAKLQ-HRNLVRX 536
           KLG+G +G V+K      G+ VAVK++      S   Q  F+ EI ++ +L  H N+V  
Sbjct: 16  KLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFR-EIMILTELSGHENIVNL 74
Query: 537 XXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLL-------- 588
                             +   D +L     E  L    R  I+E + +  +        
Sbjct: 75  LNVLRA------------DNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVI 122
Query: 589 -YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG------------------ 629
            YLH      ++HRD+K SNILL+ + + K++DFG++R F                    
Sbjct: 123 KYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTEN 179
Query: 630 -DELQSKTKRIVGTYGYMSPEYAQQGLFSIKS-DVFSFGVLLLETLSSK 676
            D+ Q      V T  Y +PE         K  D++S G +L E L  K
Sbjct: 180 FDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 39/225 (17%)
Query: 483 LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N++     
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 84
Query: 540 XXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLG--WGTRVR-----------IIEGIAQG 586
                         P +SL+ F       +L+G      V+           +I  I +G
Sbjct: 85  -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           L Y+H      +IHRDLK SN+ +++D   KI D G+AR    DE+       V T  Y 
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDGGLAR-HTDDEMTG----YVATRWYR 189
Query: 647 SPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL 690
           +PE     + ++   D++S G ++ E L+ +  T F  T+ +  L
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 83/196 (42%), Gaps = 12/196 (6%)
Query: 483 LGEGGFGPVYKGRLLN----GQEVAVKRLSS-QSGQGQEEFKNEIKLIAKLQHRNLVRXX 537
           +GEG FG V++G  ++       VA+K   +  S   +E+F  E   + +  H ++V+  
Sbjct: 18  IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 538 XXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLR 597
                             +   F      ++  L   + +     ++  L YL      R
Sbjct: 78  GVITENPVWIIMELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYLESK---R 131
Query: 598 VIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFS 657
            +HRD+ A N+L+  +   K+ DFG++R +  D    K  +      +M+PE      F+
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 658 IKSDVFSFGVLLLETL 673
             SDV+ FGV + E L
Sbjct: 191 SASDVWMFGVCMWEIL 206

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 85/209 (40%), Gaps = 14/209 (6%)
Query: 474 TANFSTENKLGEGGFGPVYKG-RLLNGQEVAVKRLSS-QSGQGQEEFKNEIKLIAKLQHR 531
           +++F  ++ LGEG +G V        G+ VA+K++              EIK++   +H 
Sbjct: 10  SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 532 NLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH 591
           N++                  +  + +   L       +L        I    + +  LH
Sbjct: 70  NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL--------QSKTKRIVGTY 643
             +   VIHRDLK SN+L++ + + K+ DFG+ARI              QS     V T 
Sbjct: 130 GSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATR 186
Query: 644 GYMSPEYA-QQGLFSIKSDVFSFGVLLLE 671
            Y +PE       +S   DV+S G +L E
Sbjct: 187 WYRAPEVMLTSAKYSRAMDVWSCGCILAE 215

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 84/196 (42%), Gaps = 12/196 (6%)
Query: 483 LGEGGFGPVYKGRLLNGQ----EVAVKRLSS-QSGQGQEEFKNEIKLIAKLQHRNLVRXX 537
           +GEG FG V++G  ++ +     VA+K   +  S   +E+F  E   + +  H ++V+  
Sbjct: 18  IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 538 XXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLR 597
                             +   F      ++  L   + +     ++  L YL      R
Sbjct: 78  GVITENPVWIIMELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYLESK---R 131
Query: 598 VIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFS 657
            +HRD+ A N+L+  +   K+ DFG++R +  D    K  +      +M+PE      F+
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 658 IKSDVFSFGVLLLETL 673
             SDV+ FGV + E L
Sbjct: 191 SASDVWMFGVCMWEIL 206

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 49.7 bits (117), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           IA  L YLH    L +++RDLK  NILLD   +  ++DFG+ +     E  S T    GT
Sbjct: 148 IASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCK--ENIEHNSTTSTFCGT 202
Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETL 673
             Y++PE   +  +    D +  G +L E L
Sbjct: 203 PEYLAPEVLHKQPYDRTVDWWCLGAVLYEML 233

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 49.7 bits (117), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 84/196 (42%), Gaps = 12/196 (6%)
Query: 483 LGEGGFGPVYKGRLLNGQ----EVAVKRLSS-QSGQGQEEFKNEIKLIAKLQHRNLVRXX 537
           +GEG FG V++G  ++ +     VA+K   +  S   +E+F  E   + +  H ++V+  
Sbjct: 23  IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 538 XXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLR 597
                             +   F      ++  L   + +     ++  L YL      R
Sbjct: 83  GVITENPVWIIMELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYLESK---R 136
Query: 598 VIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFS 657
            +HRD+ A N+L+  +   K+ DFG++R +  D    K  +      +M+PE      F+
Sbjct: 137 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 195
Query: 658 IKSDVFSFGVLLLETL 673
             SDV+ FGV + E L
Sbjct: 196 SASDVWMFGVCMWEIL 211

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 49.7 bits (117), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 84/196 (42%), Gaps = 12/196 (6%)
Query: 483 LGEGGFGPVYKGRLLNGQ----EVAVKRLSS-QSGQGQEEFKNEIKLIAKLQHRNLVRXX 537
           +GEG FG V++G  ++ +     VA+K   +  S   +E+F  E   + +  H ++V+  
Sbjct: 46  IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 538 XXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLR 597
                             +   F      ++  L   + +     ++  L YL      R
Sbjct: 106 GVITENPVWIIMELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYLESK---R 159
Query: 598 VIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFS 657
            +HRD+ A N+L+  +   K+ DFG++R +  D    K  +      +M+PE      F+
Sbjct: 160 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 218
Query: 658 IKSDVFSFGVLLLETL 673
             SDV+ FGV + E L
Sbjct: 219 SASDVWMFGVCMWEIL 234

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 49.7 bits (117), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 84/196 (42%), Gaps = 12/196 (6%)
Query: 483 LGEGGFGPVYKGRLLNGQ----EVAVKRLSS-QSGQGQEEFKNEIKLIAKLQHRNLVRXX 537
           +GEG FG V++G  ++ +     VA+K   +  S   +E+F  E   + +  H ++V+  
Sbjct: 15  IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 538 XXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLR 597
                             +   F      ++  L   + +     ++  L YL      R
Sbjct: 75  GVITENPVWIIMELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYLESK---R 128
Query: 598 VIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFS 657
            +HRD+ A N+L+  +   K+ DFG++R +  D    K  +      +M+PE      F+
Sbjct: 129 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 187
Query: 658 IKSDVFSFGVLLLETL 673
             SDV+ FGV + E L
Sbjct: 188 SASDVWMFGVCMWEIL 203

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 49.3 bits (116), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 84/196 (42%), Gaps = 12/196 (6%)
Query: 483 LGEGGFGPVYKGRLLNGQ----EVAVKRLSS-QSGQGQEEFKNEIKLIAKLQHRNLVRXX 537
           +GEG FG V++G  ++ +     VA+K   +  S   +E+F  E   + +  H ++V+  
Sbjct: 20  IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 538 XXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLR 597
                             +   F      ++  L   + +     ++  L YL      R
Sbjct: 80  GVITENPVWIIMELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYLESK---R 133
Query: 598 VIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFS 657
            +HRD+ A N+L+  +   K+ DFG++R +  D    K  +      +M+PE      F+
Sbjct: 134 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 192
Query: 658 IKSDVFSFGVLLLETL 673
             SDV+ FGV + E L
Sbjct: 193 SASDVWMFGVCMWEIL 208

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 49.3 bits (116), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 84/196 (42%), Gaps = 12/196 (6%)
Query: 483 LGEGGFGPVYKGRLLNGQ----EVAVKRLSS-QSGQGQEEFKNEIKLIAKLQHRNLVRXX 537
           +GEG FG V++G  ++ +     VA+K   +  S   +E+F  E   + +  H ++V+  
Sbjct: 21  IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 538 XXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLR 597
                             +   F      ++  L   + +     ++  L YL      R
Sbjct: 81  GVITENPVWIIMELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYLESK---R 134
Query: 598 VIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFS 657
            +HRD+ A N+L+  +   K+ DFG++R +  D    K  +      +M+PE      F+
Sbjct: 135 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 193
Query: 658 IKSDVFSFGVLLLETL 673
             SDV+ FGV + E L
Sbjct: 194 SASDVWMFGVCMWEIL 209

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 49.3 bits (116), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 49/91 (53%), Gaps = 9/91 (9%)
Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNP--KISDFGMARIFGGDELQSKTKRIVGTY 643
           G+ Y H    ++V HRDLK  N LLD    P  KI+DFG ++      L S+ K  VGT 
Sbjct: 127 GVSYAHA---MQVAHRDLKLENTLLDGSPAPRLKIADFGYSK---ASVLHSQPKSAVGTP 180
Query: 644 GYMSPEYAQQGLFSIK-SDVFSFGVLLLETL 673
            Y++PE   +  +  K +DV+S GV L   L
Sbjct: 181 AYIAPEVLLKKEYDGKVADVWSCGVTLYVML 211

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 18/198 (9%)
Query: 483 LGEGGFGPVYKGRLLN-GQEVAVKRL--SSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXX 539
           +GEG +G V K R  + G+ VA+K+   S      ++    EIKL+ +L+H NLV     
Sbjct: 33  VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 540 XXXXXXXXXXXXXMPNKSLD-FFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRV 598
                        + +  LD   LF     N L +    + +  I  G+ + H ++   +
Sbjct: 93  CKKKKRWYLVFEFVDHTILDDLELF----PNGLDYQVVQKYLFQIINGIGFCHSHN---I 145
Query: 599 IHRDLKASNILLDKDMNPKISDFGMARIFG--GDELQSKTKRIVGTYGYMSPEYAQQGL- 655
           IHRD+K  NIL+ +    K+ DFG AR     G+    +    V T  Y +PE     + 
Sbjct: 146 IHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDE----VATRWYRAPELLVGDVK 201
Query: 656 FSIKSDVFSFGVLLLETL 673
           +    DV++ G L+ E  
Sbjct: 202 YGKAVDVWAIGCLVTEMF 219

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 8/97 (8%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMA-RIFGGDELQSKTKRIVG 641
           +A+ ++ +    +L  +HRD+K  NIL+D + + +++DFG   ++     +QS     VG
Sbjct: 181 LAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVA--VG 238
Query: 642 TYGYMSPEYAQ-----QGLFSIKSDVFSFGVLLLETL 673
           T  Y+SPE  Q     +G +  + D +S GV + E L
Sbjct: 239 TPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEML 275

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 82/196 (41%), Gaps = 12/196 (6%)
Query: 483 LGEGGFGPVYKGRLLN----GQEVAVKRLSS-QSGQGQEEFKNEIKLIAKLQHRNLVRXX 537
           +GEG FG V++G  ++       VA+K   +  S   +E+F  E   + +  H ++V+  
Sbjct: 18  IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 538 XXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLR 597
                             +   F      ++  L   + +     ++  L YL      R
Sbjct: 78  GVITENPVWIIMELCTLGELRSFL---QVRKFSLDLASLILYAYQLSTALAYLESK---R 131
Query: 598 VIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFS 657
            +HRD+ A N+L+      K+ DFG++R +  D    K  +      +M+PE      F+
Sbjct: 132 FVHRDIAARNVLVSATDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 658 IKSDVFSFGVLLLETL 673
             SDV+ FGV + E L
Sbjct: 191 SASDVWMFGVCMWEIL 206

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
           G+ +LH      +IHRDLK SNI++  D   KI DFG+AR  G   +   T  +V  Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM--TPYVVTRY-Y 191
Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLETL 673
            +PE      +    D++S GV++ E +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMI 219

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNP--KISDFGMARIFGGDELQSKTKR 638
           + +  G+ Y H    ++V HRDLK  N LLD    P  KI DFG ++      L S+ K 
Sbjct: 121 QQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKS 174
Query: 639 IVGTYGYMSPEYAQQGLFSIK-SDVFSFGVLLLETL 673
            VGT  Y++PE   +  +  K +DV+S GV L   L
Sbjct: 175 TVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVML 210

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNP--KISDFGMARIFGGDELQSKTKR 638
           + +  G+ Y H    ++V HRDLK  N LLD    P  KI DFG ++      L S+ K 
Sbjct: 122 QQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKS 175
Query: 639 IVGTYGYMSPEYAQQGLFSIK-SDVFSFGVLLLETL 673
            VGT  Y++PE   +  +  K +DV+S GV L   L
Sbjct: 176 TVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVML 211

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 17/111 (15%)
Query: 589 YLHQYSRLRVIHRDLKASNILL---DKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
           YLH+     +IHRDLK  N+LL   ++D   KI+DFG ++I G   L    + + GT  Y
Sbjct: 129 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM---RTLCGTPTY 182
Query: 646 MSPEY---AQQGLFSIKSDVFSFGVLLLETLS-----SKRNTDFSNTNSLT 688
           ++PE         ++   D +S GV+L   LS     S+  T  S  + +T
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT 233

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
           G+ +LH      +IHRDLK SNI++  D   KI DFG+AR  G   +   T  +V  Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM--TPYVVTRY-Y 191
Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLETL 673
            +PE      +    D++S GV++ E +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMI 219

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 17/111 (15%)
Query: 589 YLHQYSRLRVIHRDLKASNILL---DKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
           YLH+     +IHRDLK  N+LL   ++D   KI+DFG ++I G   L    + + GT  Y
Sbjct: 129 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM---RTLCGTPTY 182
Query: 646 MSPEY---AQQGLFSIKSDVFSFGVLLLETLS-----SKRNTDFSNTNSLT 688
           ++PE         ++   D +S GV+L   LS     S+  T  S  + +T
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT 233

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 17/111 (15%)
Query: 589 YLHQYSRLRVIHRDLKASNILL---DKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
           YLH+     +IHRDLK  N+LL   ++D   KI+DFG ++I G   L    + + GT  Y
Sbjct: 128 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM---RTLCGTPTY 181
Query: 646 MSPEY---AQQGLFSIKSDVFSFGVLLLETLS-----SKRNTDFSNTNSLT 688
           ++PE         ++   D +S GV+L   LS     S+  T  S  + +T
Sbjct: 182 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT 232

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 17/111 (15%)
Query: 589 YLHQYSRLRVIHRDLKASNILL---DKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
           YLH+     +IHRDLK  N+LL   ++D   KI+DFG ++I G   L    + + GT  Y
Sbjct: 129 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM---RTLCGTPTY 182
Query: 646 MSPEY---AQQGLFSIKSDVFSFGVLLLETLS-----SKRNTDFSNTNSLT 688
           ++PE         ++   D +S GV+L   LS     S+  T  S  + +T
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT 233

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 17/111 (15%)
Query: 589 YLHQYSRLRVIHRDLKASNILL---DKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
           YLH+     +IHRDLK  N+LL   ++D   KI+DFG ++I G   L    + + GT  Y
Sbjct: 135 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM---RTLCGTPTY 188
Query: 646 MSPEY---AQQGLFSIKSDVFSFGVLLLETLS-----SKRNTDFSNTNSLT 688
           ++PE         ++   D +S GV+L   LS     S+  T  S  + +T
Sbjct: 189 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT 239

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 84/196 (42%), Gaps = 12/196 (6%)
Query: 483 LGEGGFGPVYKGRLLNGQ----EVAVKRLSS-QSGQGQEEFKNEIKLIAKLQHRNLVRXX 537
           +GEG FG V++G  ++ +     VA+K   +  S   +E+F  E   + +  H ++V+  
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 538 XXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLR 597
                             +   F      ++  L   + +     ++  L YL      R
Sbjct: 458 GVITENPVWIIMELCTLGELRSFL---QVRKFSLDLASLILYAYQLSTALAYLESK---R 511
Query: 598 VIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFS 657
            +HRD+ A N+L+  +   K+ DFG++R +  D    K  +      +M+PE      F+
Sbjct: 512 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 570
Query: 658 IKSDVFSFGVLLLETL 673
             SDV+ FGV + E L
Sbjct: 571 SASDVWMFGVCMWEIL 586

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 48/91 (52%), Gaps = 9/91 (9%)
Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNP--KISDFGMARIFGGDELQSKTKRIVGTY 643
           G+ Y H    +++ HRDLK  N LLD    P  KI DFG ++      L S+ K  VGT 
Sbjct: 128 GVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTP 181
Query: 644 GYMSPEYAQQGLFSIK-SDVFSFGVLLLETL 673
            Y++PE   +  +  K +DV+S GV L   L
Sbjct: 182 AYIAPEVLLRQEYDGKIADVWSCGVTLYVML 212

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 12/92 (13%)
Query: 589 YLHQYSRLRVIHRDLKASNILL---DKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
           YLH+     +IHRDLK  N+LL   ++D   KI+DFG ++I G   L    + + GT  Y
Sbjct: 254 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM---RTLCGTPTY 307
Query: 646 MSPEY---AQQGLFSIKSDVFSFGVLLLETLS 674
           ++PE         ++   D +S GV+L   LS
Sbjct: 308 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 339

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           A+ +L L     +  IHRD+K  N+LLDK  + K++DFG        E   +    VGT 
Sbjct: 175 AEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK-EGMVRCDTAVGTP 233
Query: 644 GYMSPEYAQ----QGLFSIKSDVFSFGVLLLETL 673
            Y+SPE  +     G +  + D +S GV L E L
Sbjct: 234 DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 267

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
           G+ +LH      +IHRDLK SNI++  D   KI DFG+AR  G   +   T  +V  Y Y
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-Y 229
Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
            +PE      +    D++S G ++ E +  K
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 12/92 (13%)
Query: 589 YLHQYSRLRVIHRDLKASNILL---DKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
           YLH+     +IHRDLK  N+LL   ++D   KI+DFG ++I G   L    + + GT  Y
Sbjct: 268 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM---RTLCGTPTY 321
Query: 646 MSPEY---AQQGLFSIKSDVFSFGVLLLETLS 674
           ++PE         ++   D +S GV+L   LS
Sbjct: 322 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 353

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           A+ +L L     +  IHRD+K  N+LLDK  + K++DFG        E   +    VGT 
Sbjct: 180 AEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK-EGMVRCDTAVGTP 238
Query: 644 GYMSPEYAQ----QGLFSIKSDVFSFGVLLLETL 673
            Y+SPE  +     G +  + D +S GV L E L
Sbjct: 239 DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 272

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+++D+    K++DFG+A+      ++ +T  + GT 
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAK-----RVKGRTWXLCGTP 202
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           I + +L +    +L  +HRD+K  N+LLD + + +++DFG   +   D+   ++   VGT
Sbjct: 181 IGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSC-LKMNDDGTVQSSVAVGT 239
Query: 643 YGYMSPEYAQ-----QGLFSIKSDVFSFGVLLLETL 673
             Y+SPE  Q      G +  + D +S GV + E L
Sbjct: 240 PDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEML 275

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           A+ +L L     +  IHRD+K  N+LLDK  + K++DFG        E   +    VGT 
Sbjct: 180 AEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK-EGMVRCDTAVGTP 238
Query: 644 GYMSPEYAQ----QGLFSIKSDVFSFGVLLLETL 673
            Y+SPE  +     G +  + D +S GV L E L
Sbjct: 239 DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 272

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+L+D+    K++DFG A+      ++ +T  + GT 
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTP 202
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+L+D+    K++DFG A+      ++ +T  + GT 
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTP 203
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYE 231

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+L+D+    K++DFG A+      ++ +T  + GT 
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTP 202
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+L+D+    K++DFG A+      ++ +T  + GT 
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTP 202
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           I + +L +    +L  +HRD+K  N+LLD + + +++DFG   +   D+   ++   VGT
Sbjct: 197 IGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSC-LKMNDDGTVQSSVAVGT 255
Query: 643 YGYMSPEYAQ-----QGLFSIKSDVFSFGVLLLETL 673
             Y+SPE  Q      G +  + D +S GV + E L
Sbjct: 256 PDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEML 291

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
           G+ +LH      +IHRDLK SNI++  D   KI DFG+AR  G   +   T  +V  Y Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-Y 192
Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
            +PE      +    D++S G ++ E +  K
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
           G+ +LH      +IHRDLK SNI++  D   KI DFG+AR  G   +   T  +V  Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-Y 191
Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
            +PE      +    D++S G ++ E +  K
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
           G+ +LH      +IHRDLK SNI++  D   KI DFG+AR  G   +   T  +V  Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMM--TPYVVTRY-Y 191
Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
            +PE      +    D++S G ++ E +  K
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
           G+ +LH      +IHRDLK SNI++  D   KI DFG+AR  G   +   T  +V  Y Y
Sbjct: 137 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-Y 190
Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
            +PE      +    D++S G ++ E +  K
Sbjct: 191 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 221

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
           G+ +LH      +IHRDLK SNI++  D   KI DFG+AR  G   +   T  +V  Y Y
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-Y 229
Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
            +PE      +    D++S G ++ E +  K
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
           G+ +LH      +IHRDLK SNI++  D   KI DFG+AR  G   +   T  +V  Y Y
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-Y 185
Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
            +PE      +    D++S G ++ E +  K
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
           G+ +LH      +IHRDLK SNI++  D   KI DFG+AR  G   +   T  +V  Y Y
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-Y 185
Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
            +PE      +    D++S G ++ E +  K
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
           G+ +LH      +IHRDLK SNI++  D   KI DFG+AR  G   +   T  +V  Y Y
Sbjct: 131 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMM--TPYVVTRY-Y 184
Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
            +PE      +    D++S G ++ E +  K
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
           G+ +LH      +IHRDLK SNI++  D   KI DFG+AR  G   +   T  +V  Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-Y 191
Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
            +PE      +    D++S G ++ E +  K
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
           G+ +LH      +IHRDLK SNI++  D   KI DFG+AR  G   +   T  +V  Y Y
Sbjct: 131 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-Y 184
Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
            +PE      +    D++S G ++ E +  K
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
           G+ +LH      +IHRDLK SNI++  D   KI DFG+AR  G   +   T  +V  Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMM--TPYVVTRY-Y 191
Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
            +PE      +    D++S G ++ E +  K
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
           G+ +LH      +IHRDLK SNI++  D   KI DFG+AR  G   +   T  +V  Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMM--TPYVVTRY-Y 191
Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
            +PE      +    D++S G ++ E +  K
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
           G+ +LH      +IHRDLK SNI++  D   KI DFG+AR  G   +   T  +V  Y Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-Y 192
Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
            +PE      +    D++S G ++ E +  K
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
           G+ +LH      +IHRDLK SNI++  D   KI DFG+AR  G   +   T  +V  Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMM--TPYVVTRY-Y 191
Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
            +PE      +    D++S G ++ E +  K
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
           G+ +LH      +IHRDLK SNI++  D   KI DFG+AR  G   +   T  +V  Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPEVVTRY-Y 191
Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLETL 673
            +PE      +    D++S G ++ E +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMI 219

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 83/196 (42%), Gaps = 12/196 (6%)
Query: 483 LGEGGFGPVYKGRLLNGQ----EVAVKRLSS-QSGQGQEEFKNEIKLIAKLQHRNLVRXX 537
           +GEG FG V++G  ++ +     VA+K   +  S   +E+F  E   + +  H ++V+  
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 538 XXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLR 597
                             +   F      ++  L   + +     ++  L YL      R
Sbjct: 458 GVITENPVWIIMELCTLGELRSFL---QVRKFSLDLASLILYAYQLSTALAYLESK---R 511
Query: 598 VIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFS 657
            +HRD+ A N+L+      K+ DFG++R +  D    K  +      +M+PE      F+
Sbjct: 512 FVHRDIAARNVLVSATDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 570
Query: 658 IKSDVFSFGVLLLETL 673
             SDV+ FGV + E L
Sbjct: 571 SASDVWMFGVCMWEIL 586

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+++D+    K++DFG A+      ++ +T  + GT 
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTP 203
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYE 231

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+++D+    K++DFG A+      ++ +T  + GT 
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTP 203
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYE 231

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+++D+    K++DFG A+      ++ +T  + GT 
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTP 203
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYE 231

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+++D+    K++DFG A+      ++ +T  + GT 
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+++D+    K++DFG A+      ++ +T  + GT 
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+++D+    K++DFG A+      ++ +T  + GT 
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTP 203
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYE 231

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL-QSKTKRIVGT 642
           A+ +L L     + +IHRD+K  N+LLDK  + K++DFG       DE         VGT
Sbjct: 181 AEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKM--DETGMVHCDTAVGT 238
Query: 643 YGYMSPEYAQ----QGLFSIKSDVFSFGVLLLETL 673
             Y+SPE  +     G +  + D +S GV L E L
Sbjct: 239 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEML 273

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
           G+ +LH      +IHRDLK SNI++  D   KI DFG+AR  G   +       V T  Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPE---VVTRYY 191
Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
            +PE      +    D++S G ++ E +  K
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+L+D+    +++DFG A+      ++ +T  + GT 
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLAGTP 202
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
           G+ +LH      +IHRDLK SNI++  D   KI DFG+AR  G   +   T  +V  Y Y
Sbjct: 143 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-Y 196
Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
            +PE      +    D++S G ++ E +  K
Sbjct: 197 RAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
           G+ +LH      +IHRDLK SNI++  D   KI DFG+AR  G   +   T  +V  Y Y
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-Y 185
Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
            +PE      +    D++S G ++ E +  K
Sbjct: 186 RAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+L+D+    +++DFG A+      ++ +T  + GT 
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
           G+ +LH      +IHRDLK SNI++  D   KI DFG+AR  G   +   T  +V  Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-Y 191
Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLETL 673
            +PE      +    D++S G ++ E +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMI 219

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
           G+ +LH      +IHRDLK SNI++  D   KI DFG+AR  G   +   T  +V  Y Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-Y 192
Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLETL 673
            +PE      +    D++S G ++ E +
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMI 220

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
           G+ +LH      +IHRDLK SNI++  D   KI DFG+AR  G   +   T  +V  Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM--TPYVVTRY-Y 191
Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLETL 673
            +PE      +    D++S G ++ E +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMI 219

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 59/108 (54%), Gaps = 17/108 (15%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNIL-LDKDMNP---KISDFGMARIFGGDELQSKTKR 638
           I + + YLH      V+HRDLK SNIL +D+  NP   +I DFG A+     +L+++   
Sbjct: 125 ITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAK-----QLRAENGL 176
Query: 639 IVG---TYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSN 683
           ++    T  +++PE  ++  +    D++S GVLL   L+    T F+N
Sbjct: 177 LMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG--YTPFAN 222

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+++D+    +++DFG+A+      ++ +T  + GT 
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAK-----RVKGRTWXLCGTP 202
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+L+D+    +++DFG A+      ++ +T  + GT 
Sbjct: 141 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 195
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 196 EYLAPEIILSKGYNKAVDWWALGVLIYE 223

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+L+D+    +++DFG A+      ++ +T  + GT 
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+L+D+    +++DFG A+      ++ +T  + GT 
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+L+D+    +++DFG A+      ++ +T  + GT 
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+L+D+    +++DFG A+      ++ +T  + GT 
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 63/117 (53%), Gaps = 17/117 (14%)
Query: 579 IIEGIAQGLLYLHQYSRLRVIHRDLKASNIL-LDKDMNP---KISDFGMARIFGGDELQS 634
           ++  I + + YLH      V+HRDLK SNIL +D+  NP   +I DFG A+     +L++
Sbjct: 126 VLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAK-----QLRA 177
Query: 635 KTKRIVG---TYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLT 688
           +   ++    T  +++PE  ++  +    D++S G+LL   L+    T F+N  S T
Sbjct: 178 ENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG--YTPFANGPSDT 232

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+L+D+    +++DFG A+      ++ +T  + GT 
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+L+D+    +++DFG A+      ++ +T  + GT 
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLXGTP 202
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
           G+ +LH      +IHRDLK SNI++  D   KI DFG+AR  G   +   T  +V  Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM--TPYVVTRY-Y 191
Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLETL 673
            +PE      +    D++S G ++ E +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMI 219

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+L+D+    +++DFG A+      ++ +T  + GT 
Sbjct: 141 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 195
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 196 EYLAPEIILSKGYNKAVDWWALGVLIYE 223

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+L+D+    +++DFG A+      ++ +T  + GT 
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
           G+ +LH      +IHRDLK SNI++  D   KI DFG+AR  G   +   T  +V  Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-Y 191
Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLETL 673
            +PE      +    D++S G ++ E +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMI 219

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+L+D+    +++DFG A+      ++ +T  + GT 
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+L+D+    +++DFG A+      ++ +T  + GT 
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+L+D+    +++DFG A+      ++ +T  + GT 
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+L+D+    +++DFG A+      ++ +T  + GT 
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+L+D+    +++DFG A+      ++ +T  + GT 
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+L+D+    +++DFG A+      ++ +T  + GT 
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+L+D+    +++DFG A+      ++ +T  + GT 
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+L+D+    +++DFG A+      ++ +T  + GT 
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 203
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYE 231

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+L+D+    +++DFG A+      ++ +T  + GT 
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+L+D+    +++DFG A+      ++ +T  + GT 
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+L+D+    +++DFG A+      ++ +T  + GT 
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+L+D+    +++DFG A+      ++ +T  + GT 
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+L+D+    +++DFG A+      ++ +T  + GT 
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 203
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYE 231

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+L+D+    +++DFG A+      ++ +T  + GT 
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 203
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYE 231

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+L+D+    +++DFG A+      ++ +T  + GT 
Sbjct: 169 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 223
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 224 EYLAPEIILSKGYNKAVDWWALGVLIYE 251

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+L+D+    +++DFG A+      ++ +T  + GT 
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTP 203
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYE 231

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+L+D+    +++DFG A+      ++ +T  + GT 
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 203
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYE 231

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+L+D+    +++DFG A+      ++ +T  + GT 
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 203
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYE 231

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+L+D+    +++DFG A+      ++ +T  + GT 
Sbjct: 169 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 223
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 224 EYLAPEIILSKGYNKAVDWWALGVLIYE 251

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+L+D+    +++DFG A+      ++ +T  + GT 
Sbjct: 134 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTP 188
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 189 EYLAPEIILSKGYNKAVDWWALGVLIYE 216

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+L+D+    +++DFG A+      ++ +T  + GT 
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 203
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYE 231

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Query: 579 IIEGIAQGLLYLHQYSRLRVIHRDLKASNILL---DKDMNPKISDFGMARIFGGDELQSK 635
           I+  +   + ++H    + V+HRDLK  N+L    + ++  KI DFG AR+   D    K
Sbjct: 111 IMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLK 167
Query: 636 TKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           T     T  Y +PE   Q  +    D++S GV+L   LS +
Sbjct: 168 TPCF--TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQ 206

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 46.2 bits (108), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+L+D+    +++DFG A+      ++ +T  + GT 
Sbjct: 135 AQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAK-----RVKGRTWXLCGTP 189
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 190 EYLAPEIILSKGYNKAVDWWALGVLIYE 217

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 46.2 bits (108), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 63/117 (53%), Gaps = 17/117 (14%)
Query: 579 IIEGIAQGLLYLHQYSRLRVIHRDLKASNIL-LDKDMNP---KISDFGMARIFGGDELQS 634
           ++  I + + YLH      V+HRDLK SNIL +D+  NP   +I DFG A+     +L++
Sbjct: 126 VLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAK-----QLRA 177
Query: 635 KTKRIVG---TYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLT 688
           +   ++    T  +++PE  ++  +    D++S G+LL   L+    T F+N  S T
Sbjct: 178 ENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG--YTPFANGPSDT 232

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 46.2 bits (108), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+L+D+    +++DFG A+      ++ +T  + GT 
Sbjct: 143 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 197
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 198 EYLAPEIILSKGYNKAVDWWALGVLIYE 225

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 46.2 bits (108), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
           G+ +LH      +IHRDLK SNI++  D   KI DFG+AR  G   +   T  +V  Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-Y 191
Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLETL 673
            +PE      +    D++S G ++ E +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMI 219

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 46.2 bits (108), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 11/105 (10%)
Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNIL-LDKDMNP---KISDFGMARIFGGDELQSKTKR 638
           I + + YLH      V+HRDLK SNIL +D+  NP   +I DFG A+    +     T  
Sbjct: 125 ITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTP- 180
Query: 639 IVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSN 683
              T  +++PE  ++  +    D++S GVLL   L+    T F+N
Sbjct: 181 -CYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTG--YTPFAN 222

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
           G+ +LH      +IHRDLK SNI++  D   KI DFG+AR  G   +   T  +V  Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM--TPYVVTRY-Y 191
Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLETL 673
            +PE      +    D++S G ++ E +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMI 219

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
           G+ +LH      +IHRDLK SNI++  D   KI DFG+AR  G   +       V T  Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPE---VVTRYY 191
Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
            +PE      +    D++S G ++ E +  K
Sbjct: 192 RAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 95/226 (42%), Gaps = 39/226 (17%)
Query: 469 SVSAATANFSTENK------LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFK 519
           SV  A + F+   +      +G G  G V      + G  VAVK+LS   Q+    +   
Sbjct: 12  SVEVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAY 71
Query: 520 NEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLD-----FFLFDSTKENL---- 570
            E+ L+  + H+N++                   P K+L+     + + +    NL    
Sbjct: 72  RELVLLKCVNHKNIISLLNVFT------------PQKTLEEFQDVYLVMELMDANLCQVI 119
Query: 571 ---LGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF 627
              L       ++  +  G+ +LH      +IHRDLK SNI++  D   KI DFG+AR  
Sbjct: 120 HMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA 176
Query: 628 GGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETL 673
             + +   T  +V  Y Y +PE      ++   D++S G ++ E +
Sbjct: 177 CTNFMM--TPYVVTRY-YRAPEVILGMGYAANVDIWSVGCIMGELV 219

>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 96/233 (41%), Gaps = 42/233 (18%)
Query: 482 KLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQG-QEEFKNEIKLIAKLQHRNLVRXXXXX 540
           K+G G +G VYK +  +G++     L    G G       EI L+ +L+H N++      
Sbjct: 28  KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVF 87
Query: 541 XXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGT------------RVRIIEGIAQGLL 588
                              + LFD  + +L  W               V++  G+ + LL
Sbjct: 88  LSHADRKV-----------WLLFDYAEHDL--WHIIKFHRASKANKKPVQLPRGMVKSLL 134
Query: 589 Y-----LHQYSRLRVIHRDLKASNILL----DKDMNPKISDFGMARIFGGD-ELQSKTKR 638
           Y     +H      V+HRDLK +NIL+     +    KI+D G AR+F    +  +    
Sbjct: 135 YQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDP 194
Query: 639 IVGTYGYMSPEYAQQGLFSIKS-DVFSFGVLLLETLSSK-----RNTDFSNTN 685
           +V T+ Y +PE         K+ D+++ G +  E L+S+     R  D   +N
Sbjct: 195 VVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSN 247

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+++D+    +++DFG A+      ++ +T  + GT 
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230

>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 67/169 (39%), Gaps = 10/169 (5%)
Query: 465 FSLASVSAATANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIK 523
           F   +V            L EGGF  VY+ + + +G+E A+KRL S   +       E+ 
Sbjct: 18  FVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVC 77
Query: 524 LIAKLQ-HRNLVRXXXXXXXXXXXXXXXXX-------MPNKSLDFFLFDSTKENLLGWGT 575
            + KL  H N+V+                        +    L  FL        L   T
Sbjct: 78  FMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDT 137
Query: 576 RVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMA 624
            ++I     + + ++H+  +  +IHRDLK  N+LL      K+ DFG A
Sbjct: 138 VLKIFYQTCRAVQHMHR-QKPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
           G+ +LH      +IHRDLK SNI++  D   KI DFG+AR  G   +       V T  Y
Sbjct: 140 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVP---FVVTRYY 193
Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLETL 673
            +PE      +    D++S G ++ E +
Sbjct: 194 RAPEVILGMGYKENVDIWSVGCIMGEMI 221

>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/218 (22%), Positives = 94/218 (43%), Gaps = 23/218 (10%)
Query: 470 VSAATANFSTENKLGEGGFGP-VYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKL 528
           V     +F  ++ LG G  G  VY+G + + ++VAVKR+  +     +    E++L+ + 
Sbjct: 19  VIVGKISFCPKDVLGHGAEGTIVYRG-MFDNRDVAVKRILPECFSFAD---REVQLLRES 74
Query: 529 -QHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTR-VRIIEGIAQG 586
            +H N++R                       ++      +++    G   + +++    G
Sbjct: 75  DEHPNVIRYFCTEKDRQFQYIAIELCAATLQEYV----EQKDFAHLGLEPITLLQQTTSG 130
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDK-----DMNPKISDFGMARIFG-GDELQSKTKRIV 640
           L +LH    L ++HRDLK  NIL+        +   ISDFG+ +    G    S+   + 
Sbjct: 131 LAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVP 187
Query: 641 GTYGYMSPEYAQQGLF---SIKSDVFSFGVLLLETLSS 675
           GT G+++PE   +      +   D+FS G +    +S 
Sbjct: 188 GTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISE 225

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+++D+    +++DFG A+      ++ +T  + GT 
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 203 EYLAPEIIISKGYNKAVDWWALGVLIYE 230

>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16 In Complex With Staurosporine Length = 317

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 97/237 (40%), Gaps = 41/237 (17%)
Query: 481 NKLGEGGFGPV--YKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXX 538
            KLGEGGF  V   +G L +G   A+KR+     Q +EE + E  +     H N++R   
Sbjct: 35  QKLGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVA 93
Query: 539 XXXXXXXXXXXXXXMPNKSLDFF----LFDST-----KENLLGWGTRVRIIEGIAQGLLY 589
                         +    L FF    L++       K N L     + ++ GI +GL  
Sbjct: 94  YCLRERGAKHEAWLL----LPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEA 149
Query: 590 LHQYSRLRVIHRDLKASNILLDKDMNPKISDFG---MARIFGGDELQSKTKRIVG----T 642
           +H        HRDLK +NILL  +  P + D G    A I      Q+ T +       T
Sbjct: 150 IHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCT 206
Query: 643 YGYMSPEYAQQGLFSIKS--------DVFSFGVLLLETLSSKRNTD--FSNTNSLTL 689
             Y +PE     LFS++S        DV+S G +L   +  +   D  F   +S+ L
Sbjct: 207 ISYRAPE-----LFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVAL 258

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNP--KISDFGMARIFGGDELQSKTKR 638
           + +  G+ Y H    ++V HRDLK  N LLD    P  KI  FG ++      L S+ K 
Sbjct: 122 QQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPKS 175
Query: 639 IVGTYGYMSPEYAQQGLFSIK-SDVFSFGVLLLETL 673
            VGT  Y++PE   +  +  K +DV+S GV L   L
Sbjct: 176 TVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVML 211

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+L+D+    +++DFG A+      ++  T  + GT 
Sbjct: 169 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGATWTLCGTP 223
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ E
Sbjct: 224 EYLAPEIILSKGYNKAVDWWALGVLIYE 251

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+L+D+    +++DFG A+      ++ +T  + GT 
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++PE      ++   D ++ GVL+ +
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYQ 230

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNP--KISDFGMARIFGGDELQSKTKR 638
           + +  G+ Y H    ++V HRDLK  N LLD    P  KI  FG ++      L S+ K 
Sbjct: 122 QQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPKD 175
Query: 639 IVGTYGYMSPEYAQQGLFSIK-SDVFSFGVLLLETL 673
            VGT  Y++PE   +  +  K +DV+S GV L   L
Sbjct: 176 TVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVML 211

>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 91/215 (42%), Gaps = 22/215 (10%)
Query: 472 AATANFSTENKLGEGGFGPVYKG-RLLNGQEVAVKRLSSQSGQGQEEFKN------EIKL 524
           A  A +     LG+GGFG V+ G RL +  +VA+K +      G     +      E+ L
Sbjct: 28  AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVAL 87
Query: 525 IAKL----QHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRII 580
           + K+     H  ++R                  P  + D F +  T++  LG G      
Sbjct: 88  LWKVGAGGGHPGVIRLLDWFETQEGFMLVLER-PLPAQDLFDY-ITEKGPLGEGPSRCFF 145
Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLD-KDMNPKISDFGMARIFGGDELQSKTKRI 639
             +   + + H      V+HRD+K  NIL+D +    K+ DFG   +   DE  +     
Sbjct: 146 GQVVAAIQHCHSRG---VVHRDIKDENILIDLRRGCAKLIDFGSGALL-HDEPYTDFD-- 199
Query: 640 VGTYGYMSPEY-AQQGLFSIKSDVFSFGVLLLETL 673
            GT  Y  PE+ ++    ++ + V+S G+LL + +
Sbjct: 200 -GTRVYSPPEWISRHQYHALPATVWSLGILLYDMV 233

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 78/186 (41%), Gaps = 33/186 (17%)
Query: 483 LGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRXXXXXX 541
           LG GG G V+     +  + VA+K++     Q  +    EIK+I +L H N+V+      
Sbjct: 19  LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 542 XXXXXXXXXXXMPNKSLDFFLFDSTKE----NLLGWGTRVR-----IIEGIAQGLLYLHQ 592
                         +    ++     E    N+L  G  +       +  + +GL Y+H 
Sbjct: 79  PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIHS 138
Query: 593 YSRLRVIHRDLKASNILLD-KDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYA 651
            +   V+HRDLK +N+ ++ +D+  KI DFG+ARI                   M P Y+
Sbjct: 139 AN---VLHRDLKPANLFINTEDLVLKIGDFGLARI-------------------MDPHYS 176
Query: 652 QQGLFS 657
            +G  S
Sbjct: 177 HKGHLS 182

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 100/240 (41%), Gaps = 41/240 (17%)
Query: 469 SVSAATANFSTENK------LGEGGFGPVYKG-RLLNGQEVAVKRLSS--QSGQGQEEFK 519
           SV  A + F+   +      +G G  G V      + G  VAVK+LS   Q+    +   
Sbjct: 10  SVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAY 69
Query: 520 NEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLD-----FFLFDSTKENL---- 570
            E+ L+  + H+N++                   P K+L+     + + +    NL    
Sbjct: 70  RELVLLKCVNHKNIISLLNVFT------------PQKTLEEFQDVYLVMELMDANLCQVI 117
Query: 571 ---LGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF 627
              L       ++  +  G+ +LH      +IHRDLK SNI++  D   KI DFG+AR  
Sbjct: 118 HMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA 174
Query: 628 GGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSL 687
             + +   T  +V  Y Y +PE      +    D++S G ++ E +  K +  F  T+ +
Sbjct: 175 STNFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGELV--KGSVIFQGTDHI 229

>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGM---ARIFGGDELQSKTKRIVGTY 643
           LL L       ++H D+K +NI L      K+ DFG+       G  E+Q    R     
Sbjct: 167 LLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPR----- 221
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLET 672
            YM+PE   QG +   +DVFS G+ +LE 
Sbjct: 222 -YMAPELL-QGSYGTAADVFSLGLTILEV 248

>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 79/186 (42%), Gaps = 10/186 (5%)
Query: 467 LASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQ--EEFKNEIKL 524
             S+S     +S   ++G GG   V++      Q  A+K ++ +    Q  + ++NEI  
Sbjct: 20  FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 79
Query: 525 IAKLQ-HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGI 583
           + KLQ H + +                    N  L+ +L    K+++  W  R    + +
Sbjct: 80  LNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWL--KKKKSIDPW-ERKSYWKNM 136
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
            + +  +HQ+    ++H DLK +N L+   M  K+ DFG+A     D         VGT 
Sbjct: 137 LEAVHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDXXXVVKDSQVGTV 192
Query: 644 GYMSPE 649
            YM PE
Sbjct: 193 NYMPPE 198

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+L+D+    +++DFG A+      ++ +T  + GT 
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            Y++P       ++   D ++ GVL+ E
Sbjct: 203 EYLAPAIILSKGYNKAVDWWALGVLIYE 230

>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 79/186 (42%), Gaps = 10/186 (5%)
Query: 467 LASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQ--EEFKNEIKL 524
             S+S     +S   ++G GG   V++      Q  A+K ++ +    Q  + ++NEI  
Sbjct: 20  FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 79
Query: 525 IAKLQ-HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGI 583
           + KLQ H + +                    N  L+ +L    K+++  W  R    + +
Sbjct: 80  LNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWL--KKKKSIDPW-ERKSYWKNM 136
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
            + +  +HQ+    ++H DLK +N L+   M  K+ DFG+A     D         VGT 
Sbjct: 137 LEAVHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTV 192
Query: 644 GYMSPE 649
            YM PE
Sbjct: 193 NYMPPE 198

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 90/210 (42%), Gaps = 34/210 (16%)
Query: 483 LGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKN-EIKLIAKLQHRNLVRXXXXXX 541
           +G G FG V++ +L+   EVA+K++        + FKN E++++  ++H N+V       
Sbjct: 48  IGNGSFGVVFQAKLVESDEVAIKKVLQD-----KRFKNRELQIMRIVKHPNVVDLKAFFY 102
Query: 542 XXXXXXXXXXXMPNKSLDFFL---FDSTKENLLGWGTR-VRIIEGIAQGLLYLHQYSRLR 597
                        +K  + FL    +   E +        ++ + +   L+ L+ Y  LR
Sbjct: 103 SNG----------DKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLR 152
Query: 598 ---------VIHRDLKASNILLDKDMNP-KISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
                    + HRD+K  N+LLD      K+ DFG A+I    E       I   Y Y +
Sbjct: 153 SLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE--PNVSXICSRY-YRA 209
Query: 648 PEYAQQGL-FSIKSDVFSFGVLLLETLSSK 676
           PE       ++   D++S G ++ E +  +
Sbjct: 210 PELIFGATNYTTNIDIWSTGCVMAELMQGQ 239

>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/232 (22%), Positives = 89/232 (38%), Gaps = 19/232 (8%)
Query: 467 LASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQ----------- 515
           +A + A  + ++ +  +  G +G V  G    G  VA+KR+ +    G+           
Sbjct: 14  IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 516 EEFKNEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGT 575
           +    EI+L+    H N++                  +  + +   L     +  +    
Sbjct: 74  KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 576 RVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK 635
           +  I   +   LL LH      V+HRDL   NILL  + +  I DF +AR    D   + 
Sbjct: 134 Q-HIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR---EDTADAN 189
Query: 636 TKRIVGTYGYMSPEYAQQGL-FSIKSDVFSFGVLLLETLSSK---RNTDFSN 683
               V    Y +PE   Q   F+   D++S G ++ E  + K   R + F N
Sbjct: 190 KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYN 241

>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 80/188 (42%), Gaps = 35/188 (18%)
Query: 577 VRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLD-------------KDMNPKISDFGM 623
           + ++  IA G+ +LH    L++IHRDLK  NIL+              +++   ISDFG+
Sbjct: 136 ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
Query: 624 ARIF--GGDELQSKTKRIVGTYGYMSPEYAQQGL---FSIKSDVFSFGVLLLETLSSKRN 678
            +    G    +       GT G+ +PE  ++      +   D+FS G +    LS  ++
Sbjct: 193 CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH 252
Query: 679 T--DFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAAD 736
              D  +  S  + G    ++  D    L D +L  EA+ LI           +  D   
Sbjct: 253 PFGDKYSRESNIIRG----IFSLDEMKCLHDRSLIAEATDLISQ--------MIDHDPLK 300
Query: 737 RPTMFEVV 744
           RPT  +V+
Sbjct: 301 RPTAMKVL 308

>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 52/232 (22%), Positives = 89/232 (38%), Gaps = 19/232 (8%)
Query: 467 LASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQ----------- 515
           +A + A  + ++ +  +  G +G V  G    G  VA+KR+ +    G+           
Sbjct: 14  IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 516 EEFKNEIKLIAKLQHRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGT 575
           +    EI+L+    H N++                  +  + +   L     +  +    
Sbjct: 74  KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 576 RVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK 635
           +  I   +   LL LH      V+HRDL   NILL  + +  I DF +AR    D   + 
Sbjct: 134 Q-HIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR---EDTADAN 189
Query: 636 TKRIVGTYGYMSPEYAQQGL-FSIKSDVFSFGVLLLETLSSK---RNTDFSN 683
               V    Y +PE   Q   F+   D++S G ++ E  + K   R + F N
Sbjct: 190 KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYN 241

>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 79/184 (42%), Gaps = 12/184 (6%)
Query: 470 VSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQ--EEFKNEIKLIAK 527
           +S     +S   ++G GG   V++      Q  A+K ++ +    Q  + ++NEI  + K
Sbjct: 7   ISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK 66
Query: 528 LQHRN--LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQ 585
           LQ  +  ++R                 M   ++D   +   K+++  W  R    + + +
Sbjct: 67  LQQHSDKIIRLYDYEITDQYIYMV---MECGNIDLNSWLKKKKSIDPW-ERKSYWKNMLE 122
Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
            +  +HQ+    ++H DLK +N L+   M  K+ DFG+A     D         VGT  Y
Sbjct: 123 AVHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNY 178
Query: 646 MSPE 649
           M PE
Sbjct: 179 MPPE 182

>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 80/188 (42%), Gaps = 35/188 (18%)
Query: 577 VRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLD-------------KDMNPKISDFGM 623
           + ++  IA G+ +LH    L++IHRDLK  NIL+              +++   ISDFG+
Sbjct: 136 ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
Query: 624 ARIF--GGDELQSKTKRIVGTYGYMSPEYAQQGL---FSIKSDVFSFGVLLLETLSSKRN 678
            +    G    +       GT G+ +PE  ++      +   D+FS G +    LS  ++
Sbjct: 193 CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH 252
Query: 679 T--DFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAAD 736
              D  +  S  + G    ++  D    L D +L  EA+ LI           +  D   
Sbjct: 253 PFGDKYSRESNIIRG----IFSLDEMKCLHDRSLIAEATDLISQ--------MIDHDPLK 300
Query: 737 RPTMFEVV 744
           RPT  +V+
Sbjct: 301 RPTAMKVL 308

>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 78/183 (42%), Gaps = 10/183 (5%)
Query: 470 VSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQ--EEFKNEIKLIAK 527
           +S     +S   ++G GG   V++      Q  A+K ++ +    Q  + ++NEI  + K
Sbjct: 51  ISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK 110
Query: 528 LQ-HRNLVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQG 586
           LQ H + +                    N  L+ +L    K+++  W  R    + + + 
Sbjct: 111 LQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWL--KKKKSIDPW-ERKSYWKNMLEA 167
Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           +  +HQ+    ++H DLK +N L+   M  K+ DFG+A     D         VGT  YM
Sbjct: 168 VHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 647 SPE 649
            PE
Sbjct: 224 PPE 226

>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 120/279 (43%), Gaps = 33/279 (11%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQ--SGQGQEEFKNEIKLIAKLQHRNL 533
           NF T  KL E   G ++KGR   G ++ VK L  +  S +   +F  E   +    H N+
Sbjct: 13  NFLT--KLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNV 69
Query: 534 --VRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH 591
             V                  MP  SL   L + T   ++     V+    +A+G+ +LH
Sbjct: 70  LPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTN-FVVDQSQAVKFALDMARGMAFLH 128
Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYA 651
               L   H  L + ++++D+DM  +IS   MA +    +   ++   +    +++PE  
Sbjct: 129 TLEPLIPRHA-LNSRSVMIDEDMTARIS---MADV----KFSFQSPGRMYAPAWVAPEAL 180
Query: 652 QQGLFSI---KSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP 708
           Q+         +D++SF VLL E ++  R   F++ +++ +            A E + P
Sbjct: 181 QKKPEDTNRRSADMWSFAVLLWELVT--REVPFADLSNMEIGMKV--------ALEGLRP 230
Query: 709 TLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML 747
           T+    S  + ++ + +   C+ ED A RP    +V +L
Sbjct: 231 TIPPGISPHV-SKLMKI---CMNEDPAKRPKFDMIVPIL 265

>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 73/160 (45%), Gaps = 7/160 (4%)
Query: 476 NFSTENKLGEGGFGPVYKGRLLNG-QEVAVKRLSS--QSGQGQEEFKNEIKLIAKLQHRN 532
           N+  ++ +G G +G VY     N  + VA+K+++   +     +    EI ++ +L+   
Sbjct: 29  NYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 88
Query: 533 LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVR-IIEGIAQGLLYLH 591
           ++R                 +  +  D  L    K  +      V+ I+  +  G  ++H
Sbjct: 89  IIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIH 148
Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE 631
           +     +IHRDLK +N LL++D + KI DFG+AR    D+
Sbjct: 149 ESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDK 185

>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLDKD-MNPKISDFGMARIFGGDELQSK---TKRIV 640
           +GL YLH  SR R++H D+KA N+LL  D  +  + DFG A     D L         I 
Sbjct: 196 EGLEYLH--SR-RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIP 252
Query: 641 GTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETL 673
           GT  +M+PE         K DV+S   ++L  L
Sbjct: 253 GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHML 285

>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 79/184 (42%), Gaps = 12/184 (6%)
Query: 470 VSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQ--EEFKNEIKLIAK 527
           +S     +S   ++G GG   V++      Q  A+K ++ +    Q  + ++NEI  + K
Sbjct: 3   ISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK 62
Query: 528 LQHRN--LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQ 585
           LQ  +  ++R                 M   ++D   +   K+++  W  R    + + +
Sbjct: 63  LQQHSDKIIRLYDYEITDQYIYMV---MECGNIDLNSWLKKKKSIDPW-ERKSYWKNMLE 118
Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
            +  +HQ+    ++H DLK +N L+   M  K+ DFG+A     D         VGT  Y
Sbjct: 119 AVHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNY 174
Query: 646 MSPE 649
           M PE
Sbjct: 175 MPPE 178

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           AQ +L       L +I+RDLK  N+L+D+    +++DFG A+      ++ +T  + GT 
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
             ++PE      ++   D ++ GVL+ E
Sbjct: 203 EALAPEIILSKGYNKAVDWWALGVLIYE 230

>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 79/184 (42%), Gaps = 12/184 (6%)
Query: 470 VSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQ--EEFKNEIKLIAK 527
           +S     +S   ++G GG   V++      Q  A+K ++ +    Q  + ++NEI  + K
Sbjct: 4   ISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK 63
Query: 528 LQHRN--LVRXXXXXXXXXXXXXXXXXMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQ 585
           LQ  +  ++R                 M   ++D   +   K+++  W  R    + + +
Sbjct: 64  LQQHSDKIIRLYDYEITDQYIYMV---MECGNIDLNSWLKKKKSIDPW-ERKSYWKNMLE 119
Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
            +  +HQ+    ++H DLK +N L+   M  K+ DFG+A     D         VGT  Y
Sbjct: 120 AVHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNY 175
Query: 646 MSPE 649
           M PE
Sbjct: 176 MPPE 179

>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLDKD-MNPKISDFGMARIFGGDELQS---KTKRIV 640
           +GL YLH  SR R++H D+KA N+LL  D  +  + DFG A     D L         I 
Sbjct: 177 EGLEYLH--SR-RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIP 233
Query: 641 GTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETL 673
           GT  +M+PE         K DV+S   ++L  L
Sbjct: 234 GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHML 266

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	795
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	1e-139
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	1e-138
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	1e-121
3soc_A	322	Activin receptor type-2A; structural genomics cons	2e-91
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	3e-76
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	4e-62
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	5e-62
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	3e-60
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	3e-60
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	3e-60
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	2e-59
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	6e-58
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	9e-58
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	3e-54
3q4u_A	301	Activin receptor type-1; structural genomics conso	7e-52
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	3e-51
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	2e-50
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	8e-49
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	2e-48
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	4e-48
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	4e-48
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	1e-47
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	7e-47
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	1e-46
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	1e-46
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	4e-46
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	7e-46
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	7e-46
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	2e-45
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	2e-45
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	2e-45
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	3e-45
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	3e-45
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	4e-45
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	7e-45
4aoj_A	329	High affinity nerve growth factor receptor; transf	8e-45
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	9e-45
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	1e-44
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	1e-44
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	1e-44
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	1e-44
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-44
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	2e-44
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	6e-44
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	8e-44
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	1e-43
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	2e-43
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	2e-43
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	2e-43
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	3e-43
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	4e-43
3pls_A	298	Macrophage-stimulating protein receptor; protein k	5e-43
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	9e-43
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	1e-42
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	2e-42
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	2e-42
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	3e-42
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	7e-42
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	1e-41
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	2e-41
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	2e-41
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	2e-41
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	3e-41
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	3e-41
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	5e-41
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	7e-41
2a19_B	284	Interferon-induced, double-stranded RNA-activated	8e-41
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	2e-40
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	3e-40
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	5e-40
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	2e-39
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	2e-39
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	5e-39
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	1e-38
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	4e-38
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	2e-37
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	2e-37
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	3e-37
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	5e-37
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	8e-37
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	3e-36
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	3e-36
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	9e-36
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	9e-36
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	1e-35
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	2e-35
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	6e-35
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	7e-35
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-34
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	2e-34
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	5e-34
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	8e-34
3fme_A	290	Dual specificity mitogen-activated protein kinase;	9e-33
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	1e-32
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	2e-32
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-32
3aln_A	327	Dual specificity mitogen-activated protein kinase;	2e-32
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	3e-32
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	4e-32
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	5e-32
3an0_A	340	Dual specificity mitogen-activated protein kinase;	6e-32
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	6e-32
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	2e-31
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	4e-31
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	5e-31
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	7e-31
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	7e-31
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	1e-30
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-30
2dyl_A	318	Dual specificity mitogen-activated protein kinase	2e-30
3ork_A	311	Serine/threonine protein kinase; structural genomi	3e-30
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	3e-30
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	8e-30
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	2e-29
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	3e-29
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	3e-29
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	3e-29
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	4e-29
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	1e-28
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	2e-28
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	2e-28
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	2e-28
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	3e-28
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	5e-28
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	6e-28
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	9e-28
3o0g_A	292	Cell division protein kinase 5; kinase activator c	1e-27
3niz_A	311	Rhodanese family protein; structural genomics, str	1e-27
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	2e-27
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	3e-27
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	3e-27
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	3e-27
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	4e-27
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	5e-27
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	6e-27
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	7e-27
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	8e-27
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	9e-27
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	1e-26
3bhy_A	283	Death-associated protein kinase 3; death associate	1e-26
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	2e-26
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	2e-26
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-26
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	2e-26
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	4e-26
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	4e-26
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	5e-26
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	5e-26
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	5e-26
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	5e-26
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	8e-26
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	8e-26
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	9e-26
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	9e-26
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	1e-25
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	1e-25
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	2e-25
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	3e-25
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	4e-25
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	4e-25
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	6e-25
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	6e-25
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	7e-25
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	1e-24
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	1e-24
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	3e-24
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	3e-24
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	4e-24
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	4e-24
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	5e-24
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	1e-23
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	1e-23
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	5e-23
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	7e-23
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	2e-22
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	3e-22
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	3e-22
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	6e-22
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	7e-22
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	9e-22
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	1e-21
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	1e-20
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	1e-20
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	3e-20
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	3e-20
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	6e-20
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	8e-19
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	9e-11
3uqc_A	286	Probable conserved transmembrane protein; structur	9e-19
3rp9_A	458	Mitogen-activated protein kinase; structural genom	3e-18
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	6e-17
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	3e-16
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	3e-16
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	3e-16
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	9e-16
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	1e-15
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	1e-15
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	2e-15
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	2e-15
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	7e-15
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	9e-15
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	1e-14
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	1e-14
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	2e-14
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	3e-14
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	3e-14
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	5e-14
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	8e-14
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	9e-14
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	1e-13
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	1e-13
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	1e-13
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	3e-13
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	5e-13
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	1e-12
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	1e-12
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	1e-12
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	2e-12
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	2e-12
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	2e-12
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	2e-12
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	3e-12
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	3e-12
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	4e-12
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	7e-12
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	1e-11
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	2e-11
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	4e-11
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	5e-10
3a0c_A	110	Mannose/sialic acid-binding lectin; beta-prism II,	6e-10
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	9e-10
1kj1_A	109	Lectin I, lecgna 1; BULB lectin, mannose, plant pr	3e-09
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	7e-09
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	8e-09
2dpf_A	115	Curculin; sweet taste, taste modifying, plant prot	2e-08
1xd5_A	112	Gastrodianin-1, antifungal protein GAFP-1; monocot	2e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-05
1b2p_A	119	Protein (lectin); mannose-binding lectin, monocot,	7e-08
1b2p_A	119	Protein (lectin); mannose-binding lectin, monocot,	3e-04
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	9e-08
3dzw_A	109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	9e-08
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	3e-07
3mez_B	113	Mannose-specific lectin 3 chain 2; heterotetramer,	3e-06
3r0e_B	110	Lectin; carbohydrate binding, carbohydrate, sugar	3e-06
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	3e-06
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	3e-06
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	4e-06
3r0e_A	109	Lectin; carbohydrate binding, carbohydrate, sugar	7e-06
1dlp_A	236	Lectin scafet precursor; two-domain lectin, beta p	6e-05

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  413 bits (1064), Expect = e-139
 Identities = 119/289 (41%), Positives = 170/289 (58%), Gaps = 6/289 (2%)

Query: 465 FSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQE-EFKNEIK 523
           FSL  +  A+ NFS +N LG GGFG VYKGRL +G  VAVKRL  +  QG E +F+ E++
Sbjct: 20  FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVE 79

Query: 524 LIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENL-LGWGTRVRIIEG 582
           +I+   HRNL+RL G C+   E++L+Y YM N S+   L +  +    L W  R RI  G
Sbjct: 80  MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 139

Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
            A+GL YLH +   ++IHRD+KA+NILLD++    + DFG+A++    +    T  + GT
Sbjct: 140 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTT-AVRGT 198

Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFS---NTNSLTLLGHAWDLWKD 699
            G+++PEY   G  S K+DVF +GV+LLE ++ +R  D +   N + + LL     L K+
Sbjct: 199 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 258

Query: 700 DRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT 748
            +   L+D  LQ       + + I V LLC Q    +RP M EVV ML 
Sbjct: 259 KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  410 bits (1057), Expect = e-138
 Identities = 111/303 (36%), Positives = 160/303 (52%), Gaps = 18/303 (5%)

Query: 456 RTRDSWFPMFSLASVSAATANFSTE------NKLGEGGFGPVYKGRLLNGQEVAVKRLSS 509
              D+ F  FS   +   T NF         NK+GEGGFG VYKG + N   VAVK+L++
Sbjct: 6   EVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAA 64

Query: 510 ----QSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDS 565
                + + +++F  EIK++AK QH NLV LLG   + ++  L+Y YMPN SL   L   
Sbjct: 65  MVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL 124

Query: 566 TKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR 625
                L W  R +I +G A G+ +LH+      IHRD+K++NILLD+    KISDFG+AR
Sbjct: 125 DGTPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILLDEAFTAKISDFGLAR 181

Query: 626 IFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTN 685
                     T RIVGT  YM+PE   +G  + KSD++SFGV+LLE ++     D     
Sbjct: 182 ASEKFAQTVMTSRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHREP 240

Query: 686 SLTLLGHAWDLWKDDRAWE-LIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVV 744
              LL    ++  +++  E  ID  + N+A    +    +V   C+ E    RP + +V 
Sbjct: 241 Q-LLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQ 298

Query: 745 SML 747
            +L
Sbjct: 299 QLL 301

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  367 bits (945), Expect = e-121
 Identities = 104/285 (36%), Positives = 164/285 (57%), Gaps = 5/285 (1%)

Query: 465 FSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKL 524
             L  +  AT NF  +  +G G FG VYKG L +G +VA+KR + +S QG EEF+ EI+ 
Sbjct: 29  VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIET 88

Query: 525 IAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENL-LGWGTRVRIIEGI 583
           ++  +H +LV L+G C E  E ILIY+YM N +L   L+ S    + + W  R+ I  G 
Sbjct: 89  LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA 148

Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           A+GL YLH  +   +IHRD+K+ NILLD++  PKI+DFG+++     +    +  + GT 
Sbjct: 149 ARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTL 205

Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSN-TNSLTLLGHAWDLWKDDRA 702
           GY+ PEY  +G  + KSDV+SFGV+L E L ++     S     + L   A +   + + 
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265

Query: 703 WELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML 747
            +++DP L ++     L ++ +  + C+   + DRP+M +V+  L
Sbjct: 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score =  289 bits (741), Expect = 2e-91
 Identities = 70/310 (22%), Positives = 125/310 (40%), Gaps = 33/310 (10%)

Query: 465 FSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKL 524
               ++   +           G FG V+K +L   + VAVK    Q  Q   + + E+  
Sbjct: 14  LGTENLYFQSMPLQLLEVKARGRFGCVWKAQL-LNEYVAVKIFPIQDKQS-WQNEYEVYS 71

Query: 525 IAKLQHRNLVRLLGCCIE----LEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRII 580
           +  ++H N+++ +G          +  LI  +    SL  FL    K N++ W     I 
Sbjct: 72  LPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL----KANVVSWNELCHIA 127

Query: 581 EGIAQGLLYLHQ-------YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ 633
           E +A+GL YLH+         +  + HRD+K+ N+LL  ++   I+DFG+A  F   +  
Sbjct: 128 ETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSA 187

Query: 634 SKTKRIVGTYGYMSPEYAQQGL-----FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLT 688
             T   VGT  YM+PE  +  +       ++ D+++ G++L E  S  R T         
Sbjct: 188 GDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS--RCTAADGPVDEY 245

Query: 689 LLGHAWDLWKDDRAWEL--------IDPTLQNE-ASYLILNRYINVGLLCVQEDAADRPT 739
           +L    ++ +     ++          P L++    +  +         C   DA  R +
Sbjct: 246 MLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLS 305

Query: 740 MFEVVSMLTN 749
              V   +T 
Sbjct: 306 AGCVGERITQ 315

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score =  249 bits (638), Expect = 3e-76
 Identities = 70/336 (20%), Positives = 124/336 (36%), Gaps = 44/336 (13%)

Query: 465 FSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNE--I 522
            + +  S    N      +G G +G VYKG L + + VAVK  S  + Q    F NE  I
Sbjct: 3   AAASEPSLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQ---NFINEKNI 58

Query: 523 KLIAKLQHRNLVRLLGCCIE-----LEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRV 577
             +  ++H N+ R +            E +L+ EY PN SL  +L      +   W +  
Sbjct: 59  YRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL----SLHTSDWVSSC 114

Query: 578 RIIEGIAQGLLYLHQ------YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG-- 629
           R+   + +GL YLH       + +  + HRDL + N+L+  D    ISDFG++    G  
Sbjct: 115 RLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNR 174

Query: 630 ----DELQSKTKRIVGTYGYMSPEYAQQGL-------FSIKSDVFSFGVLLLETLSSKRN 678
                E  +     VGT  YM+PE  +  +          + D+++ G++  E      +
Sbjct: 175 LVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTD 234

Query: 679 TDFSNTNSLTLLGHAWDLWKDDRAWELID--------PTLQNE--ASYLILNRYINVGLL 728
                +     +    ++       ++          P        + L +         
Sbjct: 235 LFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIED 294

Query: 729 CVQEDAADRPTMFEVVSMLTNKTINLPHPRQPAFSS 764
           C  +DA  R T       +    +     +  + ++
Sbjct: 295 CWDQDAEARLTAQXAEERMAELMMIWERNKSVSPTA 330

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score =  210 bits (537), Expect = 4e-62
 Identities = 76/283 (26%), Positives = 126/283 (44%), Gaps = 26/283 (9%)

Query: 480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGC 539
           E  +G G FG V K +    ++VA+K++ S+S +  + F  E++ ++++ H N+V+L G 
Sbjct: 13  EEVVGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGA 69

Query: 540 CIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
           C+      L+ EY    SL   L  +           +      +QG+ YLH      +I
Sbjct: 70  CLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 127

Query: 600 HRDLKASNILLDKDMN-PKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSI 658
           HRDLK  N+LL       KI DFG A      ++Q+      G+  +M+PE  +   +S 
Sbjct: 128 HRDLKPPNLLLVAGGTVLKICDFGTAC-----DIQTHMTNNKGSAAWMAPEVFEGSNYSE 182

Query: 659 KSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWEL-IDPTLQNEASYL 717
           K DVFS+G++L E ++  R   F            W +    R     +   L      L
Sbjct: 183 KCDVFSWGIILWEVIT--RRKPFDEIGG-PAFRIMWAVHNGTR---PPLIKNLPKPIESL 236

Query: 718 ILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPRQP 760
           +          C  +D + RP+M E+V ++T+     P   +P
Sbjct: 237 MTR--------CWSKDPSQRPSMEEIVKIMTHLMRYFPGADEP 271

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score =  210 bits (536), Expect = 5e-62
 Identities = 77/272 (28%), Positives = 128/272 (47%), Gaps = 20/272 (7%)

Query: 480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQ--SGQGQEEFKNEIKLIAKLQHRNLVRLL 537
           + K+G G FG V++    +G +VAVK L  Q    +   EF  E+ ++ +L+H N+V  +
Sbjct: 42  KEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100

Query: 538 GCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLR 597
           G   +     ++ EY+   SL   L  S     L    R+ +   +A+G+ YLH      
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN-RNPP 159

Query: 598 VIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFS 657
           ++HR+LK+ N+L+DK    K+ DFG++R+     L SK+    GT  +M+PE  +    +
Sbjct: 160 IVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSA--AGTPEWMAPEVLRDEPSN 217

Query: 658 IKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYL 717
            KSDV+SFGV+L E  +      + N N   ++      +K  R   L  P   N     
Sbjct: 218 EKSDVYSFGVILWELAT--LQQPWGNLNPAQVVAAV--GFKCKR---LEIPRNLNPQVAA 270

Query: 718 ILNRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
           I+         C   +   RP+   ++ +L  
Sbjct: 271 IIEG-------CWTNEPWKRPSFATIMDLLRP 295

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score =  204 bits (520), Expect = 3e-60
 Identities = 82/282 (29%), Positives = 122/282 (43%), Gaps = 35/282 (12%)

Query: 480 ENKLGEGGFGPVYKGRLLNGQEVAVKRL----SSQSGQGQEEFKNEIKLIAKLQHRNLVR 535
           E  +G GGFG VY+     G EVAVK           Q  E  + E KL A L+H N++ 
Sbjct: 12  EEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA 70

Query: 536 LLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSR 595
           L G C++     L+ E+     L+  L        +     V     IA+G+ YLH  + 
Sbjct: 71  LRGVCLKEPNLCLVMEFARGGPLNRVL----SGKRIPPDILVNWAVQIARGMNYLHDEAI 126

Query: 596 LRVIHRDLKASNILLDKDMNP--------KISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
           + +IHRDLK+SNIL+ + +          KI+DFG+AR       ++      G Y +M+
Sbjct: 127 VPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLARE----WHRTTKMSAAGAYAWMA 182

Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID 707
           PE  +  +FS  SDV+S+GVLL E L+      F   + L +               L  
Sbjct: 183 PEVIRASMFSKGSDVWSYGVLLWELLT--GEVPFRGIDGLAVAYGV--AMNKLA---LPI 235

Query: 708 PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
           P+   E    ++         C   D   RP+   ++  LT 
Sbjct: 236 PSTCPEPFAKLMED-------CWNPDPHSRPSFTNILDQLTT 270

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score =  204 bits (521), Expect = 3e-60
 Identities = 73/285 (25%), Positives = 134/285 (47%), Gaps = 37/285 (12%)

Query: 480 ENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQ-------EEFKNEIKLIAKLQHR 531
           E ++G+GGFG V+KGRL+ +   VA+K L     +G+       +EF+ E+ +++ L H 
Sbjct: 24  EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83

Query: 532 NLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH 591
           N+V+L G         ++ E++P   L   L D  K + + W  ++R++  IA G+ Y+ 
Sbjct: 84  NIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIALGIEYMQ 139

Query: 592 QYSRLRVIHRDLKASNILLDK-----DMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
                 ++HRDL++ NI L        +  K++DFG+++     +       ++G + +M
Sbjct: 140 N-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVSGLLGNFQWM 193

Query: 647 SPE--YAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWE 704
           +PE   A++  ++ K+D +SF ++L   L+      F   +   +        +  R   
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILT--GEGPFDEYSYGKIKFINMIREEGLR--- 248

Query: 705 LIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
              PT+  +       R  NV  LC   D   RP    +V  L+ 
Sbjct: 249 ---PTIPED----CPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score =  203 bits (518), Expect = 2e-59
 Identities = 72/299 (24%), Positives = 123/299 (41%), Gaps = 37/299 (12%)

Query: 480 ENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLG 538
              LG+G FG   K      G+ + +K L     + Q  F  E+K++  L+H N+++ +G
Sbjct: 15  GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIG 74

Query: 539 CCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRV 598
              + +    I EY+   +L   +     ++   W  RV   + IA G+ YLH    + +
Sbjct: 75  VLYKDKRLNFITEYIKGGTLRGIIKS--MDSQYPWSQRVSFAKDIASGMAYLHS---MNI 129

Query: 599 IHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKR------------IVGTYGYM 646
           IHRDL + N L+ ++ N  ++DFG+AR+   ++ Q +  R            +VG   +M
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWM 189

Query: 647 SPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNT-DFSNTNSLTLLGHAWDLWKDDRAWEL 705
           +PE      +  K DVFSFG++L E +       D+        L             + 
Sbjct: 190 APEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNV-------RGFLDR 242

Query: 706 IDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML----TNKTINLPHPRQP 760
             P     + + I  R       C   D   RP+  ++   L     +   +LP   Q 
Sbjct: 243 YCPPNCPPSFFPITVR-------CCDLDPEKRPSFVKLEHWLETLRMHLAGHLPLGPQL 294

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score =  198 bits (505), Expect = 6e-58
 Identities = 68/274 (24%), Positives = 132/274 (48%), Gaps = 25/274 (9%)

Query: 480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQ--SGQGQEEFKNEIKLIAKLQHRNLVRLL 537
             ++G G FG VYKG+  +G +VAVK L+    + Q  + FKNE+ ++ K +H N++  +
Sbjct: 29  GQRIGSGSFGTVYKGKW-HG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 86

Query: 538 GCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLR 597
           G      +  ++ ++    SL   L     E        + I    A+G+ YLH      
Sbjct: 87  GYSTA-PQLAIVTQWCEGSSLYHHLHA--SETKFEMKKLIDIARQTARGMDYLHA---KS 140

Query: 598 VIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPE---YAQQG 654
           +IHRDLK++NI L +D   KI DFG+A          + +++ G+  +M+PE        
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 200

Query: 655 LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID-PTLQNE 713
            +S +SDV++FG++L E ++ +    +SN N+   +     + +   + +L    +   +
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQI--IEMVGRGSLSPDLSKVRSNCPK 256

Query: 714 ASYLILNRYINVGLLCVQEDAADRPTMFEVVSML 747
               ++         C+++   +RP+   +++ +
Sbjct: 257 RMKRLMAE-------CLKKKRDERPSFPRILAEI 283

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score =  197 bits (503), Expect = 9e-58
 Identities = 65/275 (23%), Positives = 116/275 (42%), Gaps = 31/275 (11%)

Query: 480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQ--SGQGQEEFKNEIKLIAKLQHRNLVRLL 537
             KL E   G ++KGR   G ++ VK L  +  S +   +F  E   +    H N++ +L
Sbjct: 15  LTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVL 73

Query: 538 GCCIELEEKIL--IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSR 595
           G C          I  +MP  SL   L + T   +      V+    +A+G+ +LH    
Sbjct: 74  GACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVV-DQSQAVKFALDMARGMAFLHTLEP 132

Query: 596 LRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPE---YAQ 652
           L +    L + ++++D+DM  +IS   +   F     QS  +  +    +++PE      
Sbjct: 133 L-IPRHALNSRSVMIDEDMTARISMADVKFSF-----QSPGR--MYAPAWVAPEALQKKP 184

Query: 653 QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQN 712
           +      +D++SF VLL E ++  R   F++ +++ +        +  R    I P +  
Sbjct: 185 EDTNRRSADMWSFAVLLWELVT--REVPFADLSNMEIGMKV--ALEGLRP--TIPPGISP 238

Query: 713 EASYLILNRYINVGLLCVQEDAADRPTMFEVVSML 747
             S L+          C+ ED A RP    +V +L
Sbjct: 239 HVSKLMKI--------CMNEDPAKRPKFDMIVPIL 265

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score =  189 bits (482), Expect = 3e-54
 Identities = 69/295 (23%), Positives = 126/295 (42%), Gaps = 39/295 (13%)

Query: 480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQ--SGQGQEEFKNEIKLIAKLQHRNLVRLL 537
              +G+G FG VY GR  +G EVA++ +  +  +    + FK E+    + +H N+V  +
Sbjct: 38  GELIGKGRFGQVYHGRW-HG-EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFM 95

Query: 538 GCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLR 597
           G C+      +I      ++L   + D   + +L      +I + I +G+ YLH      
Sbjct: 96  GACMSPPHLAIITSLCKGRTLYSVVRD--AKIVLDVNKTRQIAQEIVKGMGYLHA---KG 150

Query: 598 VIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRI---VGTYGYMSPE----- 649
           ++H+DLK+ N+  D +    I+DFG+  I G  +   +  ++    G   +++PE     
Sbjct: 151 ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQL 209

Query: 650 ----YAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWEL 705
                  +  FS  SDVF+ G +  E  +  R   F    +  +    W +    +   L
Sbjct: 210 SPDTEEDKLPFSKHSDVFALGTIWYELHA--REWPFKTQPAEAI---IWQMGTGMKP-NL 263

Query: 706 IDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN---KTINLPHP 757
               +  E S ++L         C   +  +RPT  +++ ML     +   L HP
Sbjct: 264 SQIGMGKEISDILLF--------CWAFEQEERPTFTKLMDMLEKLPKRNRRLSHP 310

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score =  182 bits (463), Expect = 7e-52
 Identities = 69/300 (23%), Positives = 120/300 (40%), Gaps = 43/300 (14%)

Query: 480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNE--IKLIAKLQHRNLVRLL 537
              +G+G +G V++G    G+ VAVK  SS+    ++ +  E  +     L+H N++  +
Sbjct: 13  LECVGKGRYGEVWRGSW-QGENVAVKIFSSRD---EKSWFRETELYNTVMLRHENILGFI 68

Query: 538 GCCIELEEKI----LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH-- 591
              +          LI  Y    SL  +L    +   L   + +RI+  IA GL +LH  
Sbjct: 69  ASDMTSRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIASGLAHLHIE 124

Query: 592 ---QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF--GGDELQSKTKRIVGTYGYM 646
                 +  + HRDLK+ NIL+ K+    I+D G+A +     ++L       VGT  YM
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYM 184

Query: 647 SPE------YAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAW-DLWKD 699
           +PE               + D+++FG++L E     R                + D+  +
Sbjct: 185 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEVAR--RMVSNGIVEDYKP---PFYDVVPN 239

Query: 700 DRAWELID---------PTL-QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
           D ++E +          P +     S   L     +   C  ++ + R T   +   LT 
Sbjct: 240 DPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK 299

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score =  181 bits (461), Expect = 3e-51
 Identities = 67/293 (22%), Positives = 118/293 (40%), Gaps = 29/293 (9%)

Query: 480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGC 539
             ++G+G +G V+ G+   G++VAVK   +         + EI     ++H N++  +  
Sbjct: 42  VKQIGKGRYGEVWMGKW-RGEKVAVKVFFTTEEA-SWFRETEIYQTVLMRHENILGFIAA 99

Query: 540 CIELEEKI----LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH---- 591
            I+         LI +Y  N SL  +L    K   L   + +++      GL +LH    
Sbjct: 100 DIKGTGSWTQLYLITDYHENGSLYDYL----KSTTLDAKSMLKLAYSSVSGLCHLHTEIF 155

Query: 592 -QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF--GGDELQSKTKRIVGTYGYMSP 648
               +  + HRDLK+ NIL+ K+    I+D G+A  F    +E+       VGT  YM P
Sbjct: 156 STQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPP 215

Query: 649 E------YAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNT-----NSLTLLGHAWDLW 697
           E              I +D++SFG++L E      +           + L     +++  
Sbjct: 216 EVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDM 275

Query: 698 KDDRAWELIDPTL-QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
           ++    + + P+     +S   L +   +   C   + A R T   V   L  
Sbjct: 276 REIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAK 328

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score =  175 bits (447), Expect = 8e-49
 Identities = 72/278 (25%), Positives = 122/278 (43%), Gaps = 25/278 (8%)

Query: 476 NFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRL-SSQSGQGQEEFKNEIKLIAKLQHRNL 533
           +     ++G G FG V+ GRL  +   VAVK    +     + +F  E +++ +  H N+
Sbjct: 115 DLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNI 174

Query: 534 VRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY 593
           VRL+G C + +   ++ E +       FL   T+   L   T ++++   A G+ YL   
Sbjct: 175 VRLIGVCTQKQPIYIVMELVQGGDFLTFL--RTEGARLRVKTLLQMVGDAAAGMEYLES- 231

Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQ 653
                IHRDL A N L+ +    KISDFGM+R        +          + +PE    
Sbjct: 232 --KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNY 289

Query: 654 GLFSIKSDVFSFGVLLLETLSSKRN--TDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQ 711
           G +S +SDV+SFG+LL ET S   +   + SN  +   +         ++   L  P L 
Sbjct: 290 GRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFV---------EKGGRLPCPELC 340

Query: 712 NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
            +A + ++ +       C   +   RP+   +   L +
Sbjct: 341 PDAVFRLMEQ-------CWAYEPGQRPSFSTIYQELQS 371

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score =  172 bits (438), Expect = 2e-48
 Identities = 75/290 (25%), Positives = 125/290 (43%), Gaps = 36/290 (12%)

Query: 480 ENKLGEGGFGPVYKGRLL-----NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
             +LG+G FG V   R        G+ VAVK+L   + +   +F+ EI+++  LQH N+V
Sbjct: 15  LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 74

Query: 535 RLLGCCIELEEK--ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
           +  G C     +   LI EY+P  SL  +L     +  +     ++    I +G+ YL  
Sbjct: 75  KYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL-- 130

Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG-----YMS 647
               R IHRDL   NIL++ +   KI DFG+ ++   D+   K K      G     + +
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVK----EPGESPIFWYA 185

Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHA-WDLWKDDRAWELI 706
           PE   +  FS+ SDV+SFGV+L E  +    +       + ++G+            EL+
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 245

Query: 707 D-------PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
                   P    +  Y+I+         C   +   RP+  ++   +  
Sbjct: 246 KNNGRLPRPDGCPDEIYMIM-------TECWNNNVNQRPSFRDLALRVDQ 288

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score =  172 bits (438), Expect = 4e-48
 Identities = 72/292 (24%), Positives = 125/292 (42%), Gaps = 40/292 (13%)

Query: 480 ENKLGEGGFGPVYKGRLL-----NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
             +LG+G FG V   R        G+ VAVK+L   + +   +F+ EI+++  LQH N+V
Sbjct: 46  LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 105

Query: 535 RLLGCCIELEEK--ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
           +  G C     +   LI EY+P  SL  +L     +  +     ++    I +G+ YL  
Sbjct: 106 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL-- 161

Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE----LQSKTK---RIVGTYGY 645
               R IHRDL   NIL++ +   KI DFG+ ++   D+    ++   +          +
Sbjct: 162 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIF------W 214

Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHA-WDLWKDDRAWE 704
            +PE   +  FS+ SDV+SFGV+L E  +    +       + ++G+            E
Sbjct: 215 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 274

Query: 705 LID-------PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
           L+        P    +  Y+I+         C   +   RP+  ++   +  
Sbjct: 275 LLKNNGRLPRPDGCPDEIYMIM-------TECWNNNVNQRPSFRDLALRVDQ 319

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score =  173 bits (439), Expect = 4e-48
 Identities = 66/296 (22%), Positives = 116/296 (39%), Gaps = 35/296 (11%)

Query: 480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGC 539
           +  +G+G FG V++G+   G+EVAVK  SS+  +     + EI     L+H N++  +  
Sbjct: 47  QESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAA 104

Query: 540 CIELEEKI----LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ--- 592
             +         L+ +Y  + SL  +L        +     +++    A GL +LH    
Sbjct: 105 DNKDNGTWTQLWLVSDYHEHGSLFDYL----NRYTVTVEGMIKLALSTASGLAHLHMEIV 160

Query: 593 --YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF--GGDELQSKTKRIVGTYGYMSP 648
               +  + HRDLK+ NIL+ K+    I+D G+A       D +       VGT  YM+P
Sbjct: 161 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 220

Query: 649 E------YAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRA 702
           E        +      ++D+++ G++  E     R +         L  +   +  D   
Sbjct: 221 EVLDDSINMKHFESFKRADIYAMGLVFWEIAR--RCSIGGIHEDYQLPYYDL-VPSDPSV 277

Query: 703 WELID--------PTLQNE-ASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
            E+          P + N   S   L     +   C   + A R T   +   L+ 
Sbjct: 278 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 333

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score =  170 bits (434), Expect = 1e-47
 Identities = 82/292 (28%), Positives = 127/292 (43%), Gaps = 42/292 (14%)

Query: 480 ENKLGEGGFGPVYKGRLLN-----GQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNL 533
              LGEG FG V            G+ VAVK L + +G Q +  +K EI ++  L H ++
Sbjct: 36  IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHI 95

Query: 534 VRLLGCCIELEEK--ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH 591
           ++  GCC +       L+ EY+P  SL  +L      + +G    +   + I +G+ YLH
Sbjct: 96  IKYKGCCEDAGAASLQLVMEYVPLGSLRDYL----PRHSIGLAQLLLFAQQICEGMAYLH 151

Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE----LQSKTK---RIVGTYG 644
                  IHRDL A N+LLD D   KI DFG+A+          ++              
Sbjct: 152 A---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF------ 202

Query: 645 YMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWE 704
           + +PE  ++  F   SDV+SFGV L E L+   ++    T  L L+G A       R  E
Sbjct: 203 WYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTE 262

Query: 705 LID-------PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
           L++       P       Y ++         C + +A+ RPT   ++ +L  
Sbjct: 263 LLERGERLPRPDKCPAEVYHLM-------KNCWETEASFRPTFENLIPILKT 307

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score =  166 bits (424), Expect = 7e-47
 Identities = 70/202 (34%), Positives = 104/202 (51%), Gaps = 13/202 (6%)

Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR 535
             +   ++G G FG V+ G  LN  +VA+K +   +   +E+F  E +++ KL H  LV+
Sbjct: 9   ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQ 67

Query: 536 LLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSR 595
           L G C+E     L+ E+M +  L  +L   T+  L    T + +   + +G+ YL     
Sbjct: 68  LYGVCLEQAPICLVTEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYL---EE 122

Query: 596 LRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT---YGYMSPEYAQ 652
             VIHRDL A N L+ ++   K+SDFGM R    D+  S T    GT     + SPE   
Sbjct: 123 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GTKFPVKWASPEVFS 178

Query: 653 QGLFSIKSDVFSFGVLLLETLS 674
              +S KSDV+SFGVL+ E  S
Sbjct: 179 FSRYSSKSDVWSFGVLMWEVFS 200

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score =  167 bits (426), Expect = 1e-46
 Identities = 74/290 (25%), Positives = 122/290 (42%), Gaps = 40/290 (13%)

Query: 480 ENKLGEGGFGPVYKGRLL-----NGQEVAVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNL 533
              LGEG FG V   R        G++VAVK L  +SG     + K EI+++  L H N+
Sbjct: 26  IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENI 85

Query: 534 VRLLGCCIELEEK--ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH 591
           V+  G C E       LI E++P+ SL  +L     +N +    +++    I +G+ YL 
Sbjct: 86  VKYKGICTEDGGNGIKLIMEFLPSGSLKEYL--PKNKNKINLKQQLKYAVQICKGMDYL- 142

Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE----LQSKTK---RIVGTYG 644
                + +HRDL A N+L++ +   KI DFG+ +    D+    ++              
Sbjct: 143 --GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVF------ 194

Query: 645 YMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWE 704
           + +PE   Q  F I SDV+SFGV L E L+   +        L ++G         R   
Sbjct: 195 WYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVN 254

Query: 705 LID-----PTLQN--EASYLILNRYINVGLLCVQEDAADRPTMFEVVSML 747
            +      P   N  +  Y ++         C +   ++R +   ++   
Sbjct: 255 TLKEGKRLPCPPNCPDEVYQLM-------RKCWEFQPSNRTSFQNLIEGF 297

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score =  168 bits (428), Expect = 1e-46
 Identities = 77/310 (24%), Positives = 130/310 (41%), Gaps = 47/310 (15%)

Query: 480 ENKLGEGGFGPVYKGRLL-----NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
            ++LG+G FG V   R        G  VAVK+L       Q +F+ EI+++  L    +V
Sbjct: 28  ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIV 87

Query: 535 RLLGCCIELEEK--ILIYEYMPNKSLDFFLFDS----TKENLLGWGTRVRIIEGIAQGLL 588
           +  G       +   L+ EY+P+  L  FL           LL + +       I +G+ 
Sbjct: 88  KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSS------QICKGME 141

Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE----LQSKTK---RIVG 641
           YL      R +HRDL A NIL++ + + KI+DFG+A++   D+    ++   +       
Sbjct: 142 YLGS---RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF--- 195

Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDR 701
              + +PE     +FS +SDV+SFGV+L E  +    +   +   L ++G   D+    R
Sbjct: 196 ---WYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSR 252

Query: 702 AWELID-------PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINL 754
             EL++       P       + ++        LC      DRP+   +   L       
Sbjct: 253 LLELLEEGQRLPAPPACPAEVHELM-------KLCWAPSPQDRPSFSALGPQLDMLWSGS 305

Query: 755 PHPRQPAFSS 764
                 AF++
Sbjct: 306 RGCETHAFTA 315

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score =  165 bits (420), Expect = 4e-46
 Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 13/202 (6%)

Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR 535
           + +   +LG G FG V  G+     +VA+K +   S   ++EF  E K++  L H  LV+
Sbjct: 25  DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQ 83

Query: 536 LLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSR 595
           L G C +     +I EYM N  L  +L      +       + + + + + + YL     
Sbjct: 84  LYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYL---ES 138

Query: 596 LRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT---YGYMSPEYAQ 652
            + +HRDL A N L++     K+SDFG++R    DE  S      G+     +  PE   
Sbjct: 139 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV----GSKFPVRWSPPEVLM 194

Query: 653 QGLFSIKSDVFSFGVLLLETLS 674
              FS KSD+++FGVL+ E  S
Sbjct: 195 YSKFSSKSDIWAFGVLMWEIYS 216

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score =  170 bits (433), Expect = 7e-46
 Identities = 73/271 (26%), Positives = 125/271 (46%), Gaps = 25/271 (9%)

Query: 480 ENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLG 538
           ++KLG G +G VY+G        VAVK L   + +  EEF  E  ++ +++H NLV+LLG
Sbjct: 225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 283

Query: 539 CCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRV 598
            C       +I E+M   +L  +L +  ++  +     + +   I+  + YL    +   
Sbjct: 284 VCTREPPFYIITEFMTYGNLLDYLRECNRQE-VSAVVLLYMATQISSAMEYL---EKKNF 339

Query: 599 IHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSI 658
           IHR+L A N L+ ++   K++DFG++R+  GD   +          + +PE      FSI
Sbjct: 340 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSI 398

Query: 659 KSDVFSFGVLLLETLSSKRN--TDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASY 716
           KSDV++FGVLL E  +   +       +    LL         ++ + +  P    E  Y
Sbjct: 399 KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL---------EKDYRMERPEGCPEKVY 449

Query: 717 LILNRYINVGLLCVQEDAADRPTMFEVVSML 747
            ++         C Q + +DRP+  E+    
Sbjct: 450 ELM-------RACWQWNPSDRPSFAEIHQAF 473

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score =  164 bits (418), Expect = 7e-46
 Identities = 71/199 (35%), Positives = 104/199 (52%), Gaps = 15/199 (7%)

Query: 480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGC 539
             +LG G FG V+ G      +VAVK L   S    + F  E  L+ +LQH+ LVRL   
Sbjct: 18  VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAV 76

Query: 540 CIELEEKILI-YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRV 598
               +E I I  EYM N SL  FL  +     L     + +   IA+G+ ++        
Sbjct: 77  V--TQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFI---EERNY 130

Query: 599 IHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT---YGYMSPEYAQQGL 655
           IHRDL+A+NIL+   ++ KI+DFG+AR+   +E  ++     G      + +PE    G 
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE----GAKFPIKWTAPEAINYGT 186

Query: 656 FSIKSDVFSFGVLLLETLS 674
           F+IKSDV+SFG+LL E ++
Sbjct: 187 FTIKSDVWSFGILLTEIVT 205

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score =  163 bits (414), Expect = 2e-45
 Identities = 63/202 (31%), Positives = 98/202 (48%), Gaps = 13/202 (6%)

Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR 535
             +   +LG G FG V  G+     +VAVK +   S   ++EF  E + + KL H  LV+
Sbjct: 9   EITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVK 67

Query: 536 LLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSR 595
             G C +     ++ EY+ N  L  +L   +    L     + +   + +G+ +L     
Sbjct: 68  FYGVCSKEYPIYIVTEYISNGCLLNYL--RSHGKGLEPSQLLEMCYDVCEGMAFL---ES 122

Query: 596 LRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT---YGYMSPEYAQ 652
            + IHRDL A N L+D+D+  K+SDFGM R    D+  S      GT     + +PE   
Sbjct: 123 HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSV----GTKFPVKWSAPEVFH 178

Query: 653 QGLFSIKSDVFSFGVLLLETLS 674
              +S KSDV++FG+L+ E  S
Sbjct: 179 YFKYSSKSDVWAFGILMWEVFS 200

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score =  163 bits (415), Expect = 2e-45
 Identities = 62/202 (30%), Positives = 100/202 (49%), Gaps = 25/202 (12%)

Query: 480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGC 539
              +G+G FG V  G    G +VAVK +  ++    + F  E  ++ +L+H NLV+LLG 
Sbjct: 26  LQTIGKGEFGDVMLGDY-RGNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGV 82

Query: 540 CIELEEKILI-YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRV 598
            +E +  + I  EYM   SL  +L  S   ++LG    ++    + + + YL        
Sbjct: 83  IVEEKGGLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYL---EGNNF 138

Query: 599 IHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG------YMSPEYAQ 652
           +HRDL A N+L+ +D   K+SDFG+ +    +   +                + +PE  +
Sbjct: 139 VHRDLAARNVLVSEDNVAKVSDFGLTK----EASST-------QDTGKLPVKWTAPEALR 187

Query: 653 QGLFSIKSDVFSFGVLLLETLS 674
           +  FS KSDV+SFG+LL E  S
Sbjct: 188 EKKFSTKSDVWSFGILLWEIYS 209

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score =  163 bits (415), Expect = 2e-45
 Identities = 63/201 (31%), Positives = 103/201 (51%), Gaps = 17/201 (8%)

Query: 480 ENKLGEGGFGPVYKGRLLNG-QEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLG 538
           ++KLG G +G VY+G        VAVK L   + +  EEF  E  ++ +++H NLV+LLG
Sbjct: 18  KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 76

Query: 539 CCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRV 598
            C       +I E+M   +L  +L +  ++ +      + +   I+  + YL    +   
Sbjct: 77  VCTREPPFYIITEFMTYGNLLDYLRECNRQEV-SAVVLLYMATQISSAMEYL---EKKNF 132

Query: 599 IHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTK-----RIVGTYGYMSPEYAQQ 653
           IHRDL A N L+ ++   K++DFG++R+  GD   +        +      + +PE    
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK------WTAPESLAY 186

Query: 654 GLFSIKSDVFSFGVLLLETLS 674
             FSIKSDV++FGVLL E  +
Sbjct: 187 NKFSIKSDVWAFGVLLWEIAT 207

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score =  163 bits (415), Expect = 3e-45
 Identities = 64/220 (29%), Positives = 106/220 (48%), Gaps = 34/220 (15%)

Query: 480 ENKLGEGGFGPVYKGRLLNG------QEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNL 533
           + +LGEG FG V+     N         VAVK L   +   +++F+ E +L+  LQH ++
Sbjct: 20  KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI 79

Query: 534 VRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTR-------------VRII 580
           V+  G C + +  I+++EYM +  L+ FL     + ++    +             + I 
Sbjct: 80  VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139

Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGD--ELQSKTK 637
             IA G++YL   +    +HRDL   N L+  ++  KI DFGM+R ++  D   +   T 
Sbjct: 140 SQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTM 196

Query: 638 ---RIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
              R      +M PE      F+ +SDV+SFGV+L E  +
Sbjct: 197 LPIR------WMPPESIMYRKFTTESDVWSFGVILWEIFT 230

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score =  164 bits (417), Expect = 3e-45
 Identities = 64/212 (30%), Positives = 99/212 (46%), Gaps = 33/212 (15%)

Query: 480 ENKLGEGGFGPVYKGRLL----NGQEVAVKRL-SSQSGQGQEEFKNEIKLIAKLQHRNLV 534
           E  +G G  G V  GRL         VA+K L +  + + + +F +E  ++ +  H N++
Sbjct: 54  EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113

Query: 535 RLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
           RL G        +++ EYM N SLD FL   T +        V ++ G+  G+ YL   S
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFL--RTHDGQFTIMQLVGMLRGVGAGMRYL---S 168

Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY--------- 645
            L  +HRDL A N+L+D ++  K+SDFG++R+   D                        
Sbjct: 169 DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP-----------DAAYTTTGGKIP 217

Query: 646 ---MSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
               +PE      FS  SDV+SFGV++ E L+
Sbjct: 218 IRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score =  164 bits (416), Expect = 4e-45
 Identities = 64/211 (30%), Positives = 108/211 (51%), Gaps = 22/211 (10%)

Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQE-----VAVKRL-SSQSGQGQEEFKNEIKLIAKLQ 529
             + +  +G G FG VYKG L          VA+K L +  + + + +F  E  ++ +  
Sbjct: 45  CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFS 104

Query: 530 HRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLY 589
           H N++RL G   + +  ++I EYM N +LD FL    K+        V ++ GIA G+ Y
Sbjct: 105 HHNIIRLEGVISKYKPMMIITEYMENGALDKFL--REKDGEFSVLQLVGMLRGIAAGMKY 162

Query: 590 LHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG----- 644
           L   + +  +HRDL A NIL++ ++  K+SDFG++R+   D   + T       G     
Sbjct: 163 L---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTS-----GGKIPI 214

Query: 645 -YMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
            + +PE      F+  SDV+SFG+++ E ++
Sbjct: 215 RWTAPEAISYRKFTSASDVWSFGIVMWEVMT 245

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score =  163 bits (414), Expect = 7e-45
 Identities = 62/211 (29%), Positives = 104/211 (49%), Gaps = 32/211 (15%)

Query: 480 ENKLGEGGFGPVYKGRLLNGQE-----VAVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNL 533
              LG G FG VYKG  +   E     VA+K L   +     +E  +E  ++A + + ++
Sbjct: 20  IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 79

Query: 534 VRLLGCCIELEEKI-LIYEYMPNKSLDFFLFDS----TKENLLGWGTRVRIIEGIAQGLL 588
            RLLG C  L   + LI + MP   L  ++ +       + LL W         IA+G+ 
Sbjct: 80  CRLLGIC--LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIAKGMN 131

Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG---- 644
           YL      R++HRDL A N+L+    + KI+DFG+A++ G +E +   +      G    
Sbjct: 132 YL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG-----GKVPI 183

Query: 645 -YMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
            +M+ E     +++ +SDV+S+GV + E ++
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMT 214

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score =  163 bits (414), Expect = 8e-45
 Identities = 68/219 (31%), Positives = 107/219 (48%), Gaps = 33/219 (15%)

Query: 480 ENKLGEGGFGPVYKGRLLNGQE------VAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNL 533
           + +LGEG FG V+     N         VAVK L   S   +++F+ E +L+  LQH+++
Sbjct: 46  KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHI 105

Query: 534 VRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTR------------VRIIE 581
           VR  G C E    ++++EYM +  L+ FL     +  L  G              + +  
Sbjct: 106 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 165

Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGD--ELQSKTK- 637
            +A G++YL   + L  +HRDL   N L+ + +  KI DFGM+R I+  D   +  +T  
Sbjct: 166 QVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 222

Query: 638 --RIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             R      +M PE      F+ +SDV+SFGV+L E  +
Sbjct: 223 PIR------WMPPESILYRKFTTESDVWSFGVVLWEIFT 255

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score =  161 bits (410), Expect = 9e-45
 Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 23/206 (11%)

Query: 480 ENKLGEGGFGPVYKGRLLNGQE---VAVKRL-SSQSGQGQEEFKNEIKLIAKLQHRNLVR 535
           + +LG G FG V +G     ++   VA+K L         EE   E +++ +L +  +VR
Sbjct: 15  DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR 74

Query: 536 LLGCCIELEEKILI-YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
           L+G C    E +++  E      L  FL    K   +       ++  ++ G+ YL    
Sbjct: 75  LIGVC--QAEALMLVMEMAGGGPLHKFL--VGKREEIPVSNVAELLHQVSMGMKYL---E 127

Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG------YMSP 648
               +HRDL A N+LL      KISDFG+++  G D+     +             + +P
Sbjct: 128 EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARS-----AGKWPLKWYAP 182

Query: 649 EYAQQGLFSIKSDVFSFGVLLLETLS 674
           E      FS +SDV+S+GV + E LS
Sbjct: 183 ECINFRKFSSRSDVWSYGVTMWEALS 208

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score =  166 bits (422), Expect = 1e-44
 Identities = 60/197 (30%), Positives = 102/197 (51%), Gaps = 15/197 (7%)

Query: 480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGC 539
              +G+G FG V  G    G +VAVK +  ++    + F  E  ++ +L+H NLV+LLG 
Sbjct: 198 LQTIGKGEFGDVMLGDY-RGNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGV 254

Query: 540 CIELEEKI-LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRV 598
            +E +  + ++ EYM   SL  +L    +  L G    ++    + + + YL        
Sbjct: 255 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVL-GGDCLLKFSLDVCEAMEYL---EGNNF 310

Query: 599 IHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTK-RIVGTYGYMSPEYAQQGLFS 657
           +HRDL A N+L+ +D   K+SDFG+ +    +   ++   ++     + +PE  ++  FS
Sbjct: 311 VHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKL--PVKWTAPEALREKKFS 364

Query: 658 IKSDVFSFGVLLLETLS 674
            KSDV+SFG+LL E  S
Sbjct: 365 TKSDVWSFGILLWEIYS 381

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score =  161 bits (410), Expect = 1e-44
 Identities = 76/221 (34%), Positives = 109/221 (49%), Gaps = 35/221 (15%)

Query: 480 ENKLGEGGFGPVYKGRLLNG------QEVAVKRL-SSQSGQGQEEFKNEIKLIAKLQHRN 532
             +LGE  FG VYKG L         Q VA+K L     G  +EEF++E  L A+LQH N
Sbjct: 14  MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPN 73

Query: 533 LVRLLGCCIELEEKILIYEYMPNKSLDFFL-------------FDSTKENLLGWGTRVRI 579
           +V LLG   + +   +I+ Y  +  L  FL              D T ++ L     V +
Sbjct: 74  VVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 133

Query: 580 IEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGD--ELQSKT 636
           +  IA G+ YL   S   V+H+DL   N+L+   +N KISD G+ R ++  D  +L   +
Sbjct: 134 VAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNS 190

Query: 637 K---RIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
               R      +M+PE    G FSI SD++S+GV+L E  S
Sbjct: 191 LLPIR------WMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score =  166 bits (422), Expect = 1e-44
 Identities = 81/273 (29%), Positives = 124/273 (45%), Gaps = 31/273 (11%)

Query: 480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGC 539
           E KLG G FG V+        +VAVK +   S    E F  E  ++  LQH  LV+L   
Sbjct: 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-VEAFLAEANVMKTLQHDKLVKLHAV 251

Query: 540 CIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVI 599
             + E   +I E+M   SL  FL              +     IA+G+ ++    +   I
Sbjct: 252 VTK-EPIYIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFI---EQRNYI 306

Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT---YGYMSPEYAQQGLF 656
           HRDL+A+NIL+   +  KI+DFG+AR+   +E  ++     G      + +PE    G F
Sbjct: 307 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTARE----GAKFPIKWTAPEAINFGSF 362

Query: 657 SIKSDVFSFGVLLLETLSSKRN--TDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEA 714
           +IKSDV+SFG+LL+E ++  R      SN   +  L         +R + +  P    E 
Sbjct: 363 TIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL---------ERGYRMPRPENCPEE 413

Query: 715 SYLILNRYINVGLLCVQEDAADRPTMFEVVSML 747
            Y I+       + C +    +RPT   + S+L
Sbjct: 414 LYNIM-------MRCWKNRPEERPTFEYIQSVL 439

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score =  164 bits (416), Expect = 1e-44
 Identities = 68/207 (32%), Positives = 107/207 (51%), Gaps = 15/207 (7%)

Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQE----VAVKRL-SSQSGQGQEEFKNEIKLIAKLQH 530
           N S +  +G G FG V  GRL    +    VA+K L    + + + +F  E  ++ +  H
Sbjct: 46  NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105

Query: 531 RNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYL 590
            N++RL G   + +  +++ EYM N SLD FL     +        V ++ GIA G+ YL
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGMKYL 163

Query: 591 HQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT---YGYMS 647
              S +  +HRDL A NIL++ ++  K+SDFG+ R+   D   + T R  G      + S
Sbjct: 164 ---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTR--GGKIPIRWTS 218

Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLS 674
           PE      F+  SDV+S+G++L E +S
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMS 245

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score =  165 bits (419), Expect = 2e-44
 Identities = 82/271 (30%), Positives = 129/271 (47%), Gaps = 27/271 (9%)

Query: 480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGC 539
           E KLG+G FG V+ G       VA+K L   +    E F  E +++ KL+H  LV+L   
Sbjct: 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAV 247

Query: 540 CIELEEKILI-YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRV 598
               EE I I  EYM   SL  FL        L     V +   IA G+ Y+    R+  
Sbjct: 248 V--SEEPIYIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYV---ERMNY 301

Query: 599 IHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSI 658
           +HRDL+A+NIL+ +++  K++DFG+AR+   +E  ++         + +PE A  G F+I
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTI 360

Query: 659 KSDVFSFGVLLLETLSSKRN--TDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASY 716
           KSDV+SFG+LL E  +  R       N   L  +         +R + +  P    E+ +
Sbjct: 361 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV---------ERGYRMPCPPECPESLH 411

Query: 717 LILNRYINVGLLCVQEDAADRPTMFEVVSML 747
            ++         C +++  +RPT   + + L
Sbjct: 412 DLM-------CQCWRKEPEERPTFEYLQAFL 435

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score =  161 bits (410), Expect = 2e-44
 Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 32/211 (15%)

Query: 480 ENKLGEGGFGPVYKGRLLNGQE-----VAVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNL 533
              LG G FG V+KG  +   E     V +K +  +SG+   +   + +  I  L H ++
Sbjct: 18  LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHI 77

Query: 534 VRLLGCCIELEEKI-LIYEYMPNKSLDFFLFDS----TKENLLGWGTRVRIIEGIAQGLL 588
           VRLLG C      + L+ +Y+P  SL   +         + LL WG        IA+G+ 
Sbjct: 78  VRLLGLC--PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGV------QIAKGMY 129

Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG---- 644
           YL       ++HR+L A N+LL      +++DFG+A +   D+ Q               
Sbjct: 130 YL---EEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSE-----AKTPI 181

Query: 645 -YMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
            +M+ E    G ++ +SDV+S+GV + E ++
Sbjct: 182 KWMALESIHFGKYTHQSDVWSYGVTVWELMT 212

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score =  165 bits (420), Expect = 6e-44
 Identities = 82/271 (30%), Positives = 129/271 (47%), Gaps = 27/271 (9%)

Query: 480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGC 539
           E KLG+G FG V+ G       VA+K L   +    E F  E +++ KL+H  LV+L   
Sbjct: 272 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAV 330

Query: 540 CIELEEKILI-YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRV 598
               EE I I  EYM   SL  FL        L     V +   IA G+ Y+    R+  
Sbjct: 331 V--SEEPIYIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYV---ERMNY 384

Query: 599 IHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSI 658
           +HRDL+A+NIL+ +++  K++DFG+AR+   +E  ++         + +PE A  G F+I
Sbjct: 385 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTI 443

Query: 659 KSDVFSFGVLLLETLSSKRN--TDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASY 716
           KSDV+SFG+LL E  +  R       N   L  +         +R + +  P    E+ +
Sbjct: 444 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV---------ERGYRMPCPPECPESLH 494

Query: 717 LILNRYINVGLLCVQEDAADRPTMFEVVSML 747
            ++         C +++  +RPT   + + L
Sbjct: 495 DLM-------CQCWRKEPEERPTFEYLQAFL 518

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score =  159 bits (404), Expect = 8e-44
 Identities = 62/205 (30%), Positives = 96/205 (46%), Gaps = 21/205 (10%)

Query: 480 ENKLGEGGFGPVYKGRLLNG---QEVAVKRL--SSQSGQGQEEFKNEIKLIAKLQHRNLV 534
           + +LG G FG V KG        + VAVK L   +     ++E   E  ++ +L +  +V
Sbjct: 22  DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 81

Query: 535 RLLGCCIELEEKI-LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY 593
           R++G C    E   L+ E      L+ +L  +     +     + ++  ++ G+ YL   
Sbjct: 82  RMIGIC--EAESWMLVMEMAELGPLNKYLQQNRH---VKDKNIIELVHQVSMGMKYL--- 133

Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE----LQSKTKRIVGTYGYMSPE 649
                +HRDL A N+LL      KISDFG+++    DE     Q+  K  V    + +PE
Sbjct: 134 EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV---KWYAPE 190

Query: 650 YAQQGLFSIKSDVFSFGVLLLETLS 674
                 FS KSDV+SFGVL+ E  S
Sbjct: 191 CINYYKFSSKSDVWSFGVLMWEAFS 215

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score =  158 bits (402), Expect = 1e-43
 Identities = 76/287 (26%), Positives = 120/287 (41%), Gaps = 42/287 (14%)

Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQE----VAVKRL-SSQSGQGQEEFKNEIKLIAKLQH 530
           +      LGEG FG VY+G   N +     VAVK      +   +E+F +E  ++  L H
Sbjct: 13  DVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDH 72

Query: 531 RNLVRLLGCCIELEEKILI-YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLY 589
            ++V+L+G     EE   I  E  P   L  +L     +N L   T V     I + + Y
Sbjct: 73  PHIVKLIGII--EEEPTWIIMELYPYGELGHYL--ERNKNSLKVLTLVLYSLQICKAMAY 128

Query: 590 LHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE--LQSKTK---RIVGTYG 644
           L     +  +HRD+   NIL+      K+ DFG++R    ++    S T+   +      
Sbjct: 129 L---ESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK------ 179

Query: 645 YMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRN--TDFSNTNSLTLLGHAWDLWKDDRA 702
           +MSPE      F+  SDV+ F V + E LS  +       N + + +L         ++ 
Sbjct: 180 WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVL---------EKG 230

Query: 703 WELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
             L  P L     Y ++         C   D +DRP   E+V  L++
Sbjct: 231 DRLPKPDLCPPVLYTLM-------TRCWDYDPSDRPRFTELVCSLSD 270

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score =  158 bits (402), Expect = 2e-43
 Identities = 64/207 (30%), Positives = 99/207 (47%), Gaps = 21/207 (10%)

Query: 480 ENKLGEGGFGPVYKGRLLNG----QEVAVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNLV 534
              +G G FG VY G LL+        AVK L+  +  G+  +F  E  ++    H N++
Sbjct: 30  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89

Query: 535 RLLGCCIELEEKIL-IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY 593
            LLG C+  E   L +  YM +  L  F+ + T          +     +A+G+ YL   
Sbjct: 90  SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMKYL--- 144

Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG------YMS 647
           +  + +HRDL A N +LD+    K++DFG+AR    D    +   +    G      +M+
Sbjct: 145 ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEYYSVHNKTGAKLPVKWMA 200

Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLS 674
            E  Q   F+ KSDV+SFGVLL E ++
Sbjct: 201 LESLQTQKFTTKSDVWSFGVLLWELMT 227

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score =  157 bits (400), Expect = 2e-43
 Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 18/207 (8%)

Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQE----VAVKRL-SSQSGQGQEEFKNEIKLIAKLQH 530
                  +GEG FG V++G  ++ +     VA+K   +  S   +E+F  E   + +  H
Sbjct: 16  RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 75

Query: 531 RNLVRLLGCCIELEEKILI-YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLY 589
            ++V+L+G     E  + I  E      L  FL    ++  L   + +     ++  L Y
Sbjct: 76  PHIVKLIGVI--TENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAY 131

Query: 590 LHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE--LQSKTKRIVGTYGYMS 647
           L      R +HRD+ A N+L+  +   K+ DFG++R          SK K  +    +M+
Sbjct: 132 L---ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI---KWMA 185

Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLS 674
           PE      F+  SDV+ FGV + E L 
Sbjct: 186 PESINFRRFTSASDVWMFGVCMWEILM 212

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score =  158 bits (402), Expect = 2e-43
 Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 29/215 (13%)

Query: 480 ENKLGEGGFGPVYKGRLLNGQE----VAVKRL--SSQSGQGQEEFKNEIKLIAKLQHRNL 533
              LGEG FG V +G L         VAVK +   + S +  EEF +E   +    H N+
Sbjct: 39  GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNV 98

Query: 534 VRLLGCCIELE-----EKILIYEYMPNKSLDFFLFDS---TKENLLGWGTRVRIIEGIAQ 585
           +RLLG CIE+      + ++I  +M    L  +L  S   T    +   T ++ +  IA 
Sbjct: 99  IRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIAL 158

Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGDELQSKTK-----RI 639
           G+ YL   S    +HRDL A N +L  DM   ++DFG+++ I+ GD  +         + 
Sbjct: 159 GMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVK- 214

Query: 640 VGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
                +++ E     +++ KSDV++FGV + E  +
Sbjct: 215 -----WIAIESLADRVYTSKSDVWAFGVTMWEIAT 244

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score =  157 bits (399), Expect = 3e-43
 Identities = 63/206 (30%), Positives = 89/206 (43%), Gaps = 20/206 (9%)

Query: 480 ENKLGEGGFGPVYKGRLL----NGQEVAVKRL---SSQSGQGQEEFKNEIKLIAKLQHRN 532
             KLG+G FG V +G           VAVK L        +  ++F  E+  +  L HRN
Sbjct: 23  LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82

Query: 533 LVRLLGCCIELEEKI-LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH 591
           L+RL G    L   + ++ E  P  SL   L     +     GT  R    +A+G+ YL 
Sbjct: 83  LIRLYGVV--LTPPMKMVTELAPLGSLLDRL--RKHQGHFLLGTLSRYAVQVAEGMGYL- 137

Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT---YGYMSP 648
                R IHRDL A N+LL      KI DFG+ R    ++     +        + + +P
Sbjct: 138 --ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE--HRKVPFAWCAP 193

Query: 649 EYAQQGLFSIKSDVFSFGVLLLETLS 674
           E  +   FS  SD + FGV L E  +
Sbjct: 194 ESLKTRTFSHASDTWMFGVTLWEMFT 219

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score =  157 bits (398), Expect = 4e-43
 Identities = 53/216 (24%), Positives = 97/216 (44%), Gaps = 28/216 (12%)

Query: 476 NFSTENKLGEGGFGPVYKGRL--------LNGQEVAVKRLSSQSGQGQEEFKNEIKLIAK 527
           +      LG+G F  ++KG          L+  EV +K L        E F     +++K
Sbjct: 9   DLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSK 68

Query: 528 LQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGL 587
           L H++LV   G C+  +E IL+ E++   SLD +L     +N +    ++ + + +A  +
Sbjct: 69  LSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYL--KKNKNCINILWKLEVAKQLAAAM 126

Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNP--------KISDFGMARIFGGDELQSKTKRI 639
            +L       +IH ++ A NILL ++ +         K+SD G++      +     +RI
Sbjct: 127 HFL---EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKD--ILQERI 181

Query: 640 VGTYGYMSPEYAQQG-LFSIKSDVFSFGVLLLETLS 674
                ++ PE  +     ++ +D +SFG  L E  S
Sbjct: 182 ----PWVPPECIENPKNLNLATDKWSFGTTLWEICS 213

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score =  157 bits (398), Expect = 5e-43
 Identities = 61/203 (30%), Positives = 96/203 (47%), Gaps = 13/203 (6%)

Query: 480 ENKLGEGGFGPVYKGRLLNGQE----VAVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNLV 534
           +  +G+G FG VY G  ++  +     A+K LS  +   Q E F  E  L+  L H N++
Sbjct: 26  DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVL 85

Query: 535 RLLGCCIELEEKILI-YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY 593
            L+G  +  E    +   YM +  L  F+    +         +     +A+G+ YL   
Sbjct: 86  ALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRN--PTVKDLISFGLQVARGMEYL--- 140

Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY--GYMSPEYA 651
           +  + +HRDL A N +LD+    K++DFG+AR     E  S  +         + + E  
Sbjct: 141 AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESL 200

Query: 652 QQGLFSIKSDVFSFGVLLLETLS 674
           Q   F+ KSDV+SFGVLL E L+
Sbjct: 201 QTYRFTTKSDVWSFGVLLWELLT 223

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score =  157 bits (399), Expect = 9e-43
 Identities = 62/211 (29%), Positives = 104/211 (49%), Gaps = 32/211 (15%)

Query: 480 ENKLGEGGFGPVYKGRLLNGQE-----VAVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNL 533
              LG G FG VYKG  +   E     VA+K L   +     +E  +E  ++A + + ++
Sbjct: 20  IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 79

Query: 534 VRLLGCCIELEEKI-LIYEYMPNKSLDFFLFDS----TKENLLGWGTRVRIIEGIAQGLL 588
            RLLG C  L   + LI + MP   L  ++ +       + LL W         IA+G+ 
Sbjct: 80  CRLLGIC--LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIAKGMN 131

Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG---- 644
           YL      R++HRDL A N+L+    + KI+DFG+A++ G +E +   +      G    
Sbjct: 132 YL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG-----GKVPI 183

Query: 645 -YMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
            +M+ E     +++ +SDV+S+GV + E ++
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMT 214

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score =  156 bits (397), Expect = 1e-42
 Identities = 64/214 (29%), Positives = 104/214 (48%), Gaps = 29/214 (13%)

Query: 481 NKLGEGGFGPVYKGRLLNGQE------VAVKRL-SSQSGQGQEEFKNEIKLIAKLQHRNL 533
            +LG+G FG VY+G      +      VA+K +  + S + + EF NE  ++ +    ++
Sbjct: 31  RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 90

Query: 534 VRLLGCCIELEEKILIYEYMPNKSLDFFL-------FDSTKENLLGWGTRVRIIEGIAQG 586
           VRLLG   + +  ++I E M    L  +L        ++           +++   IA G
Sbjct: 91  VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG 150

Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGDELQSKTK-----RIV 640
           + YL   +  + +HRDL A N ++ +D   KI DFGM R I+  D  +   K     R  
Sbjct: 151 MAYL---NANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-- 205

Query: 641 GTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
               +MSPE  + G+F+  SDV+SFGV+L E  +
Sbjct: 206 ----WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score =  157 bits (400), Expect = 2e-42
 Identities = 63/207 (30%), Positives = 100/207 (48%), Gaps = 21/207 (10%)

Query: 480 ENKLGEGGFGPVYKGRLLNG----QEVAVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNLV 534
              +G G FG VY G LL+        AVK L+  +  G+  +F  E  ++    H N++
Sbjct: 94  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153

Query: 535 RLLGCCIELEEKIL-IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY 593
            LLG C+  E   L +  YM +  L  F+ + T          +     +A+G+ +L   
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMKFL--- 208

Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGDELQSKTKRIVGTYG-----YMS 647
           +  + +HRDL A N +LD+    K++DFG+AR ++  +      K    T       +M+
Sbjct: 209 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK----TGAKLPVKWMA 264

Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLS 674
            E  Q   F+ KSDV+SFGVLL E ++
Sbjct: 265 LESLQTQKFTTKSDVWSFGVLLWELMT 291

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score =  156 bits (397), Expect = 2e-42
 Identities = 66/218 (30%), Positives = 102/218 (46%), Gaps = 34/218 (15%)

Query: 480 ENKLGEGGFGPVYKGRLLNGQE---VAVKRL-SSQSGQGQEEFKNEIKLIAKL-QHRNLV 534
           ++ +GEG FG V K R+         A+KR+    S     +F  E++++ KL  H N++
Sbjct: 30  QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89

Query: 535 RLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTR-------------VRIIE 581
            LLG C       L  EY P+ +L  FL  S                        +    
Sbjct: 90  NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149

Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTK---- 637
            +A+G+ YL   S+ + IHRDL A NIL+ ++   KI+DFG++R  G +    KT     
Sbjct: 150 DVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR--GQEVYVKKTMGRLP 204

Query: 638 -RIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
            R      +M+ E     +++  SDV+S+GVLL E +S
Sbjct: 205 VR------WMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score =  155 bits (395), Expect = 3e-42
 Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 30/216 (13%)

Query: 480 ENKLGEGGFGPVYKGRLLNG----QEVAVKRL--SSQSGQGQEEFKNEIKLIAKLQHRNL 533
              LG+G FG V + +L        +VAVK L     +    EEF  E   + +  H ++
Sbjct: 28  GRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHV 87

Query: 534 VRLLGCCIELEEKI------LIYEYMPNKSLDFFLFDS---TKENLLGWGTRVRIIEGIA 584
            +L+G  +    K       +I  +M +  L  FL  S        L   T VR +  IA
Sbjct: 88  AKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIA 147

Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGDELQSKTK-----R 638
            G+ YL   S    IHRDL A N +L +DM   ++DFG++R I+ GD  +         +
Sbjct: 148 CGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVK 204

Query: 639 IVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
                 +++ E     L+++ SDV++FGV + E ++
Sbjct: 205 ------WLALESLADNLYTVHSDVWAFGVTMWEIMT 234

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score =  155 bits (394), Expect = 7e-42
 Identities = 64/229 (27%), Positives = 102/229 (44%), Gaps = 43/229 (18%)

Query: 480 ENKLGEGGFGPVYKGRLLNG------QEVAVKRL-SSQSGQGQEEFKNEIKLIAKLQHRN 532
              +GEG FG V++ R            VAVK L    S   Q +F+ E  L+A+  + N
Sbjct: 52  VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPN 111

Query: 533 LVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTR---------------- 576
           +V+LLG C   +   L++EYM    L+ FL   +   +                      
Sbjct: 112 IVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPL 171

Query: 577 -----VRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGD 630
                + I   +A G+ YL   S  + +HRDL   N L+ ++M  KI+DFG++R I+  D
Sbjct: 172 SCAEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSAD 228

Query: 631 ELQSKTK-----RIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
             ++        R      +M PE      ++ +SDV+++GV+L E  S
Sbjct: 229 YYKADGNDAIPIR------WMPPESIFYNRYTTESDVWAYGVVLWEIFS 271

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score =  160 bits (406), Expect = 1e-41
 Identities = 60/204 (29%), Positives = 96/204 (47%), Gaps = 17/204 (8%)

Query: 479 TENKLGEGGFGPVYKGRLLNGQE---VAVKRL-SSQSGQGQEEFKNEIKLIAKLQHRNLV 534
            + +LG G FG V +G     ++   VA+K L         EE   E +++ +L +  +V
Sbjct: 340 ADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIV 399

Query: 535 RLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
           RL+G C   E  +L+ E      L  FL    K   +       ++  ++ G+ YL    
Sbjct: 400 RLIGVCQA-EALMLVMEMAGGGPLHKFL--VGKREEIPVSNVAELLHQVSMGMKYL---E 453

Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE----LQSKTKRIVGTYGYMSPEY 650
               +HR+L A N+LL      KISDFG+++  G D+     +S  K  +    + +PE 
Sbjct: 454 EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPL---KWYAPEC 510

Query: 651 AQQGLFSIKSDVFSFGVLLLETLS 674
                FS +SDV+S+GV + E LS
Sbjct: 511 INFRKFSSRSDVWSYGVTMWEALS 534

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score =  153 bits (390), Expect = 2e-41
 Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 38/224 (16%)

Query: 480 ENKLGEGGFGPVYKGRLL--------NGQEVAVKRL-SSQSGQGQEEFKNEIKLIAKL-Q 529
              LGEG FG V     +            VAVK L    + +   +  +E++++  + +
Sbjct: 40  GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99

Query: 530 HRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEG------- 582
           H+N++ LLG C +     +I EY    +L  +L       +       R+ E        
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159

Query: 583 ------IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGDELQSK 635
                 +A+G+ YL   +  + IHRDL A N+L+ ++   KI+DFG+AR I   D  +  
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216

Query: 636 TK-----RIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           T      +      +M+PE     +++ +SDV+SFGVL+ E  +
Sbjct: 217 TNGRLPVK------WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score =  153 bits (388), Expect = 2e-41
 Identities = 63/229 (27%), Positives = 105/229 (45%), Gaps = 43/229 (18%)

Query: 480 ENKLGEGGFGPVYKGRLLNG------QEVAVKRL-SSQSGQGQEEFKNEIKLIAKLQHRN 532
              LGEG FG V K    +         VAVK L  + S     +  +E  ++ ++ H +
Sbjct: 28  GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPH 87

Query: 533 LVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEG---------- 582
           +++L G C +    +LI EY    SL  FL +S K      G+                 
Sbjct: 88  VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147

Query: 583 -----------IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGD 630
                      I+QG+ YL   + ++++HRDL A NIL+ +    KISDFG++R ++  D
Sbjct: 148 TMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204

Query: 631 ELQSKTK-----RIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
               +++     +      +M+ E     +++ +SDV+SFGVLL E ++
Sbjct: 205 SYVKRSQGRIPVK------WMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score =  154 bits (392), Expect = 2e-41
 Identities = 74/303 (24%), Positives = 123/303 (40%), Gaps = 60/303 (19%)

Query: 480 ENKLGEGGFGPVYKGRLL--------NGQEVAVKRL-SSQSGQGQEEFKNEIKLIAKL-Q 529
              LGEG FG V     +            VAVK L    + +   +  +E++++  + +
Sbjct: 86  GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 145

Query: 530 HRNLVRLLGCCIELEEKILIYEYMPNKSLDFFL-------------FDSTKENLLGWGTR 576
           H+N++ LLG C +     +I EY    +L  +L              +   E  + +   
Sbjct: 146 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 205

Query: 577 VRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGDELQSK 635
           V     +A+G+ YL   +  + IHRDL A N+L+ ++   KI+DFG+AR I   D  +  
Sbjct: 206 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 262

Query: 636 TK-----RIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLE--TLSSKRNTDFSNTNSLT 688
           T      +      +M+PE     +++ +SDV+SFGVL+ E  TL               
Sbjct: 263 TNGRLPVK------WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 316

Query: 689 LL--GHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM 746
           LL  GH            +  P       Y+++         C     + RPT  ++V  
Sbjct: 317 LLKEGH-----------RMDKPANCTNELYMMM-------RDCWHAVPSQRPTFKQLVED 358

Query: 747 LTN 749
           L  
Sbjct: 359 LDR 361

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score =  153 bits (388), Expect = 3e-41
 Identities = 67/215 (31%), Positives = 97/215 (45%), Gaps = 29/215 (13%)

Query: 480 ENKLGEGGFGPVYKGRLLNG------QEVAVKRL-SSQSGQGQEEFKNEIKLIAKLQHRN 532
              LG G FG VY+G++          +VAVK L    S Q + +F  E  +I+K  H+N
Sbjct: 35  IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN 94

Query: 533 LVRLLGCCIELEEKILIYEYMPNKSLDFFL----FDSTKENLLGWGTRVRIIEGIAQGLL 588
           +VR +G  ++   + ++ E M    L  FL       ++ + L     + +   IA G  
Sbjct: 95  IVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 154

Query: 589 YLHQYSRLRVIHRDLKASNILLDK---DMNPKISDFGMAR-IFGGD--ELQSKTK---RI 639
           YL        IHRD+ A N LL         KI DFGMAR I+               + 
Sbjct: 155 YL---EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK- 210

Query: 640 VGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
                +M PE   +G+F+ K+D +SFGVLL E  S
Sbjct: 211 -----WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score =  152 bits (386), Expect = 3e-41
 Identities = 62/222 (27%), Positives = 98/222 (44%), Gaps = 37/222 (16%)

Query: 481 NKLGEGGFGPVYKGRLLN------GQEVAVKRL-SSQSGQGQEEFKNEIKLIAKL-QHRN 532
             LG G FG V +            + VAVK L    +        +E+K++  +  H N
Sbjct: 33  KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92

Query: 533 LVRLLGCCIELEEKI-LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEG--------- 582
           +V LLG C +    + +I E+    +L  +L     E +        + +          
Sbjct: 93  VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152

Query: 583 ----IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGDELQSKTK 637
               +A+G+ +L   +  + IHRDL A NILL +    KI DFG+AR I+   +   K  
Sbjct: 153 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 209

Query: 638 -----RIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
                +      +M+PE     +++I+SDV+SFGVLL E  S
Sbjct: 210 ARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score =  152 bits (385), Expect = 5e-41
 Identities = 62/219 (28%), Positives = 93/219 (42%), Gaps = 28/219 (12%)

Query: 480 ENKLGEGGFGPVYKGRLLNGQE------VAVKRL-SSQSGQGQEEFKNEIKLIAKL-QHR 531
              LG G FG V +       +      VAVK L  S     +E   +E+K+++ L  H 
Sbjct: 28  GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHM 87

Query: 532 NLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEG--------- 582
           N+V LLG C      ++I EY     L  FL       +    +   + +          
Sbjct: 88  NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 147

Query: 583 ------IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGDELQSK 635
                 +A+G+ +L   +    IHRDL A NILL      KI DFG+AR I        K
Sbjct: 148 LSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 204

Query: 636 TKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
               +    +M+PE     +++ +SDV+S+G+ L E  S
Sbjct: 205 GNARL-PVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score =  152 bits (387), Expect = 7e-41
 Identities = 67/215 (31%), Positives = 97/215 (45%), Gaps = 29/215 (13%)

Query: 480 ENKLGEGGFGPVYKGRLLNG------QEVAVKRL-SSQSGQGQEEFKNEIKLIAKLQHRN 532
              LG G FG VY+G++          +VAVK L    S Q + +F  E  +I+K  H+N
Sbjct: 76  IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN 135

Query: 533 LVRLLGCCIELEEKILIYEYMPNKSLDFFL----FDSTKENLLGWGTRVRIIEGIAQGLL 588
           +VR +G  ++   + ++ E M    L  FL       ++ + L     + +   IA G  
Sbjct: 136 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 195

Query: 589 YLHQYSRLRVIHRDLKASNILLDK---DMNPKISDFGMAR-IFGGD--ELQSKTK---RI 639
           YL        IHRD+ A N LL         KI DFGMAR I+               + 
Sbjct: 196 YL---EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK- 251

Query: 640 VGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
                +M PE   +G+F+ K+D +SFGVLL E  S
Sbjct: 252 -----WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  150 bits (381), Expect = 8e-41
 Identities = 68/285 (23%), Positives = 116/285 (40%), Gaps = 48/285 (16%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
           +F     +G GGFG V+K +  ++G+   +KR+   +    E+ + E+K +AKL H N+V
Sbjct: 12  DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIV 67

Query: 535 RLLGCCIELEEKI----------------LIYEYMPNKSLDFFLFDSTKENLLGWGTRVR 578
              GC    +                   +  E+    +L+ ++ +  +   L     + 
Sbjct: 68  HYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI-EKRRGEKLDKVLALE 126

Query: 579 IIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKR 638
           + E I +G+ Y+H     ++I+RDLK SNI L      KI DFG+      D    K  R
Sbjct: 127 LFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND---GKRTR 180

Query: 639 IVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWK 698
             GT  YMSPE      +  + D+++ G++L E L          T+           + 
Sbjct: 181 SKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDT--AFETSK---------FFT 229

Query: 699 DDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEV 743
           D R   +I      +   L+           + +   DRP   E+
Sbjct: 230 DLRD-GIISDIFDKKEKTLLQK--------LLSKKPEDRPNTSEI 265

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score =  149 bits (379), Expect = 2e-40
 Identities = 69/292 (23%), Positives = 110/292 (37%), Gaps = 44/292 (15%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLS-SQSGQGQEEFKNEIKLIAKLQHRNL 533
           +F     LG GGFG V++ +  ++    A+KR+        +E+   E+K +AKL+H  +
Sbjct: 6   DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 65

Query: 534 VRLLGCCIE---------LEEKILIY---EYMPNKSLDFFLFDSTKENLLGWGTRVRIIE 581
           VR     +E            K+ +Y   +    ++L  ++              + I  
Sbjct: 66  VRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFL 125

Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKR--- 638
            IA+ + +LH      ++HRDLK SNI    D   K+ DFG+      DE +        
Sbjct: 126 QIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMP 182

Query: 639 -------IVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLG 691
                   VGT  YMSPE      +S K D+FS G++L E L       FS         
Sbjct: 183 AYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL-----YPFSTQMERVR-- 235

Query: 692 HAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEV 743
                  D R  +   P L  +         +      +     +RP    +
Sbjct: 236 ----TLTDVRNLKF--PPLFTQKYP-CEYVMVQ---DMLSPSPMERPEAINI 277

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score =  150 bits (381), Expect = 3e-40
 Identities = 63/215 (29%), Positives = 96/215 (44%), Gaps = 24/215 (11%)

Query: 480 ENKLGEGGFGPVYKGRLLNGQE------VAVKRL-SSQSGQGQEEFKNEIKLIAKL-QHR 531
              LG G FG V +       +      VAVK L S+     +E   +E+K+++ L QH 
Sbjct: 51  GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 110

Query: 532 NLVRLLGCCIELEEKILIYEYMPNKSLDFFL-----------FDSTKENLLGWGTRVRII 580
           N+V LLG C      ++I EY     L  FL             +   +       +   
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFS 170

Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGDELQSKTKRI 639
             +AQG+ +L   +    IHRD+ A N+LL      KI DFG+AR I        K    
Sbjct: 171 SQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 227

Query: 640 VGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           +    +M+PE     +++++SDV+S+G+LL E  S
Sbjct: 228 L-PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score =  150 bits (382), Expect = 5e-40
 Identities = 63/224 (28%), Positives = 102/224 (45%), Gaps = 38/224 (16%)

Query: 480 ENKLGEGGFGPVYKGRLLN--------GQEVAVKRL-SSQSGQGQEEFKNEIKLIAKL-Q 529
              LGEG FG V     +           +VAVK L S  + +   +  +E++++  + +
Sbjct: 74  GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 133

Query: 530 HRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEG------- 582
           H+N++ LLG C +     +I EY    +L  +L       L          E        
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193

Query: 583 ------IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGDELQSK 635
                 +A+G+ YL   +  + IHRDL A N+L+ +D   KI+DFG+AR I   D  +  
Sbjct: 194 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 250

Query: 636 TK-----RIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
           T      +      +M+PE     +++ +SDV+SFGVLL E  +
Sbjct: 251 TNGRLPVK------WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score =  155 bits (392), Expect = 2e-39
 Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 12/200 (6%)

Query: 480 ENKLGEGGFGPVYKGRLLNGQE----VAVKRL-SSQSGQGQEEFKNEIKLIAKLQHRNLV 534
              +GEG FG V++G  ++ +     VA+K   +  S   +E+F  E   + +  H ++V
Sbjct: 395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 454

Query: 535 RLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
           +L+G   E     +I E      L  FL    ++  L   + +     ++  L YL    
Sbjct: 455 KLIGVITE-NPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYL---E 508

Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG 654
             R +HRD+ A N+L+  +   K+ DFG++R          +K  +    +M+PE     
Sbjct: 509 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINFR 567

Query: 655 LFSIKSDVFSFGVLLLETLS 674
            F+  SDV+ FGV + E L 
Sbjct: 568 RFTSASDVWMFGVCMWEILM 587

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  146 bits (370), Expect = 2e-39
 Identities = 62/267 (23%), Positives = 116/267 (43%), Gaps = 32/267 (11%)

Query: 482 KLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLG 538
           ++G G F  VYKG       EVA    +    +   ++ FK E +++  LQH N+VR   
Sbjct: 33  EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYD 92

Query: 539 CCIELEEK----ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
                 +     +L+ E M + +L  +L    +  ++           I +GL +LH   
Sbjct: 93  SWESTVKGKKCIVLVTELMTSGTLKTYL---KRFKVMKIKVLRSWCRQILKGLQFLHT-R 148

Query: 595 RLRVIHRDLKASNILLD-KDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQ 653
              +IHRDLK  NI +     + KI D G+A +       S  K ++GT  +M+PE  ++
Sbjct: 149 TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR----ASFAKAVIGTPEFMAPEMYEE 204

Query: 654 GLFSIKSDVFSFGVLLLETLSSKR-NTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQN 712
             +    DV++FG+ +LE  +S+   ++  N   +     +    K     ++  P ++ 
Sbjct: 205 K-YDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGV--KPASFDKVAIPEVKE 261

Query: 713 EASYLILNRYINVGLLCVQEDAADRPT 739
                I+         C++++  +R +
Sbjct: 262 -----IIEG-------CIRQNKDERYS 276

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score =  147 bits (372), Expect = 5e-39
 Identities = 61/229 (26%), Positives = 92/229 (40%), Gaps = 43/229 (18%)

Query: 480 ENKLGEGGFGPVYKGRLLNGQE------VAVKRL-SSQSGQGQEEFKNEIKLIAKL-QHR 531
              LG G FG V         +      VAVK L        +E   +E+K++ +L  H 
Sbjct: 50  GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHE 109

Query: 532 NLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEG--------- 582
           N+V LLG C       LI+EY     L  +L    ++                       
Sbjct: 110 NIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVL 169

Query: 583 -----------IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR-IFGGD 630
                      +A+G+ +L        +HRDL A N+L+      KI DFG+AR I    
Sbjct: 170 TFEDLLCFAYQVAKGMEFL---EFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDS 226

Query: 631 ELQSKTK-----RIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS 674
               +       +      +M+PE   +G+++IKSDV+S+G+LL E  S
Sbjct: 227 NYVVRGNARLPVK------WMAPESLFEGIYTIKSDVWSYGILLWEIFS 269

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  144 bits (366), Expect = 1e-38
 Identities = 73/276 (26%), Positives = 121/276 (43%), Gaps = 28/276 (10%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRL---SSQSGQGQEEFKNEIKLIAKLQHR 531
           NF  E K+G G F  VY+   LL+G  VA+K++        + + +   EI L+ +L H 
Sbjct: 33  NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92

Query: 532 NLVRLLGCCIELEEKILIY-EYMPNKSLDFFLFDSTKEN-LLGWGTRVRIIEGIAQGLLY 589
           N+++     IE + ++ I  E      L   +    K+  L+   T  +    +   L +
Sbjct: 93  NVIKYYASFIE-DNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEH 151

Query: 590 LHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPE 649
           +H     RV+HRD+K +N+ +      K+ D G+ R F      + +  +VGT  YMSPE
Sbjct: 152 MHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGTPYYMSPE 206

Query: 650 YAQQGLFSIKSDVFSFGVLLLETLSSKR--NTDFSNTNSLTLLGHAWDLWKDDRAWELID 707
              +  ++ KSD++S G LL E  + +     D  N  SL          + D       
Sbjct: 207 RIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE-----QCD-----YP 256

Query: 708 PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEV 743
           P   +  S   L + +N   +C+  D   RP +  V
Sbjct: 257 PLPSDHYSE-ELRQLVN---MCINPDPEKRPDVTYV 288

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  144 bits (366), Expect = 4e-38
 Identities = 51/209 (24%), Positives = 99/209 (47%), Gaps = 17/209 (8%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRN 532
            +    K+GEG FG     +   +G++  +K   +S  S + +EE + E+ ++A ++H N
Sbjct: 25  KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPN 84

Query: 533 LVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTK----ENLLGWGTRVRIIEGIAQGLL 588
           +V+      E     ++ +Y     L   +         E+ +     +     I   L 
Sbjct: 85  IVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQI-----LDWFVQICLALK 139

Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSP 648
           ++H     +++HRD+K+ NI L KD   ++ DFG+AR+       ++    +GT  Y+SP
Sbjct: 140 HVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARA--CIGTPYYLSP 194

Query: 649 EYAQQGLFSIKSDVFSFGVLLLETLSSKR 677
           E  +   ++ KSD+++ G +L E  + K 
Sbjct: 195 EICENKPYNNKSDIWALGCVLYELCTLKH 223

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score =  140 bits (356), Expect = 2e-37
 Identities = 63/205 (30%), Positives = 100/205 (48%), Gaps = 21/205 (10%)

Query: 483 LGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCI 541
           LG+G +G VY GR L N   +A+K +  +  +  +    EI L   L+H+N+V+ LG   
Sbjct: 30  LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89

Query: 542 ELEEKILIY-EYMPNKSLDFFLFDS-----TKENLLGWGTRVRIIEGIAQGLLYLHQYSR 595
           E    I I+ E +P  SL   L          E  +G        + I +GL YLH    
Sbjct: 90  E-NGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIG-----FYTKQILEGLKYLHDN-- 141

Query: 596 LRVIHRDLKASNILLD-KDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG 654
            +++HRD+K  N+L++      KISDFG ++   G  +   T+   GT  YM+PE   +G
Sbjct: 142 -QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG--INPCTETFTGTLQYMAPEIIDKG 198

Query: 655 L--FSIKSDVFSFGVLLLETLSSKR 677
              +   +D++S G  ++E  + K 
Sbjct: 199 PRGYGKAADIWSLGCTIIEMATGKP 223

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  140 bits (355), Expect = 2e-37
 Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 10/210 (4%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRN 532
           ++     +G G +G   K R   +G+ +  K     S +   ++   +E+ L+ +L+H N
Sbjct: 7   DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66

Query: 533 LVRLLGCCIELEEKIL--IYEYMPNKSLDFFLFDSTKEN-LLGWGTRVRIIEGIAQGLLY 589
           +VR     I+     L  + EY     L   +   TKE   L     +R++  +   L  
Sbjct: 67  IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126

Query: 590 LHQ--YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
            H+       V+HRDLK +N+ LD   N K+ DFG+ARI   D   +KT   VGT  YMS
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT--FVGTPYYMS 184

Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLSSKR 677
           PE   +  ++ KSD++S G LL E  +   
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYELCALMP 214

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  140 bits (356), Expect = 3e-37
 Identities = 56/221 (25%), Positives = 92/221 (41%), Gaps = 29/221 (13%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
           +F     LG+G FG V K R  L+ +  A+K++     +      +E+ L+A L H+ +V
Sbjct: 7   DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK-LSTILSEVMLLASLNHQYVV 65

Query: 535 RLLGCCIELEEKILIYEYMPNKSLDFF---------LFD--STKENLLGWGTRVRIIEGI 583
           R     +E    +     +  KS  F          L+D   ++          R+   I
Sbjct: 66  RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQI 125

Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF------------GGDE 631
            + L Y+H      +IHRDLK  NI +D+  N KI DFG+A+                  
Sbjct: 126 LEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182

Query: 632 LQSKTKRIVGTYGYMSPE-YAQQGLFSIKSDVFSFGVLLLE 671
                   +GT  Y++ E     G ++ K D++S G++  E
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFE 223

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  140 bits (355), Expect = 5e-37
 Identities = 55/217 (25%), Positives = 90/217 (41%), Gaps = 25/217 (11%)

Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQEVAVKR--LSSQSGQGQEEFKNEIKLIAKLQHRNL 533
            +S   ++G GG   V++      Q  A+K   L     Q  + ++NEI  + KLQ  + 
Sbjct: 29  IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88

Query: 534 --VRLLGCCIELEEKI-LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYL 590
             +RL       ++ I ++ E   N  L+ +L    K+  +    R    + + + +  +
Sbjct: 89  KIIRLYDY-EITDQYIYMVMECG-NIDLNSWL---KKKKSIDPWERKSYWKNMLEAVHTI 143

Query: 591 HQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPE- 649
           HQ+    ++H DLK +N L+      K+ DFG+A     D         VGT  YM PE 
Sbjct: 144 HQH---GIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEA 199

Query: 650 ----------YAQQGLFSIKSDVFSFGVLLLETLSSK 676
                        +   S KSDV+S G +L      K
Sbjct: 200 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score =  139 bits (353), Expect = 8e-37
 Identities = 54/213 (25%), Positives = 86/213 (40%), Gaps = 25/213 (11%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
           ++    KLGEGGF  V     L +G   A+KR+     Q +EE + E  +     H N++
Sbjct: 30  HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNIL 89

Query: 535 RLLGCCIELEEK----ILIYEYMPNKSL-DFFLFDSTKENLLGWGTRVRIIEGIAQGLLY 589
           RL+  C+          L+  +    +L +       K N L     + ++ GI +GL  
Sbjct: 90  RLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEA 149

Query: 590 LHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIV-------GT 642
           +H        HRDLK +NILL  +  P + D G           S+    +        T
Sbjct: 150 IHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCT 206

Query: 643 YGYMSPE------YAQQGLFSIKSDVFSFGVLL 669
             Y +PE      +        ++DV+S G +L
Sbjct: 207 ISYRAPELFSVQSHCVID---ERTDVWSLGCVL 236

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  140 bits (354), Expect = 3e-36
 Identities = 54/219 (24%), Positives = 86/219 (39%), Gaps = 29/219 (13%)

Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQEVAVKR--LSSQSGQGQEEFKNEIKLIAKLQHRNL 533
            +S   ++G GG   V++      Q  A+K   L     Q  + ++NEI  + KLQ  + 
Sbjct: 57  IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116

Query: 534 --VRLLGCCIELEEKILIY-EYMPNKSLDFFL--FDSTKENLLGWGTRVRIIEGIAQGLL 588
             +RL       ++ I +  E   N  L+ +L    S               + + + + 
Sbjct: 117 KIIRLYDY-EITDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERK-----SYWKNMLEAVH 169

Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSP 648
            +HQ+    ++H DLK +N L+  D   K+ DFG+A     D         VG   YM P
Sbjct: 170 TIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPP 225

Query: 649 E-----------YAQQGLFSIKSDVFSFGVLLLETLSSK 676
           E              +   S KSDV+S G +L      K
Sbjct: 226 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  139 bits (351), Expect = 3e-36
 Identities = 54/219 (24%), Positives = 87/219 (39%), Gaps = 29/219 (13%)

Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQEVAVKR--LSSQSGQGQEEFKNEIKLIAKLQHRNL 533
            +S   ++G GG   V++      Q  A+K   L     Q  + ++NEI  + KLQ  + 
Sbjct: 10  IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 69

Query: 534 --VRLLGCCIELEEKI-LIYEYMPNKSLDFFL--FDSTKENLLGWGTRVRIIEGIAQGLL 588
             +RL       ++ I ++ E   N  L+ +L    S               + + + + 
Sbjct: 70  KIIRLYDY-EITDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERK-----SYWKNMLEAVH 122

Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSP 648
            +HQ+    ++H DLK +N L+      K+ DFG+A     D         VGT  YM P
Sbjct: 123 TIHQH---GIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPP 178

Query: 649 E-----------YAQQGLFSIKSDVFSFGVLLLETLSSK 676
           E              +   S KSDV+S G +L      K
Sbjct: 179 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 217

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score =  136 bits (344), Expect = 9e-36
 Identities = 56/194 (28%), Positives = 88/194 (45%), Gaps = 18/194 (9%)

Query: 483 LGEGGFGPVYKGR-LLNGQEVAVK---RLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLG 538
           LG+GGF   ++       +  A K   +        +E+   EI +   L H+++V   G
Sbjct: 23  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82

Query: 539 CCIELEEKI-LIYEYMPNKSLDFFLFDSTKEN--LLGWGTRVRIIEGIAQGLLYLHQYSR 595
              E  + + ++ E    +SL     +  K    L     R   +  I  G  YLH   R
Sbjct: 83  F-FEDNDFVFVVLELCRRRSL----LELHKRRKALTEPEAR-YYLRQIVLGCQYLH---R 133

Query: 596 LRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGL 655
            RVIHRDLK  N+ L++D+  KI DFG+A     D  + K   + GT  Y++PE   +  
Sbjct: 134 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--LCGTPNYIAPEVLSKKG 191

Query: 656 FSIKSDVFSFGVLL 669
            S + DV+S G ++
Sbjct: 192 HSFEVDVWSIGCIM 205

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  137 bits (347), Expect = 9e-36
 Identities = 52/205 (25%), Positives = 84/205 (40%), Gaps = 22/205 (10%)

Query: 481 NKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGC 539
            ++G G FG V++ +    G + AVK++  +  +       E+   A L    +V L G 
Sbjct: 64  PRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGA 118

Query: 540 CIELEEKILIY-EYMPNKSLDFFL--FDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRL 596
             E    + I+ E +   SL   +       E+   +           +GL YLH     
Sbjct: 119 VRE-GPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLG-----QALEGLEYLHT---R 169

Query: 597 RVIHRDLKASNILLDKDMNP-KISDFGMARIFGGDELQ---SKTKRIVGTYGYMSPEYAQ 652
           R++H D+KA N+LL  D +   + DFG A     D L         I GT  +M+PE   
Sbjct: 170 RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVM 229

Query: 653 QGLFSIKSDVFSFGVLLLETLSSKR 677
                 K D++S   ++L  L+   
Sbjct: 230 GKPCDAKVDIWSSCCMMLHMLNGCH 254

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score =  137 bits (346), Expect = 1e-35
 Identities = 55/194 (28%), Positives = 88/194 (45%), Gaps = 18/194 (9%)

Query: 483 LGEGGFGPVYKGR-LLNGQEVAVK---RLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLG 538
           LG+GGF   ++       +  A K   +        +E+   EI +   L H+++V   G
Sbjct: 49  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108

Query: 539 CCIELEEKI-LIYEYMPNKSLDFFLFDSTKEN--LLGWGTRVRIIEGIAQGLLYLHQYSR 595
              E  + + ++ E    +SL     +  K    L     R   +  I  G  YLH+   
Sbjct: 109 F-FEDNDFVFVVLELCRRRSL----LELHKRRKALTEPEAR-YYLRQIVLGCQYLHR--- 159

Query: 596 LRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGL 655
            RVIHRDLK  N+ L++D+  KI DFG+A     D  + K   + GT  Y++PE   +  
Sbjct: 160 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--LCGTPNYIAPEVLSKKG 217

Query: 656 FSIKSDVFSFGVLL 669
            S + DV+S G ++
Sbjct: 218 HSFEVDVWSIGCIM 231

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score =  136 bits (345), Expect = 2e-35
 Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 17/223 (7%)

Query: 454 NSRTRDSWFPMFSLASVSAATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG 512
             R R   F             +F   ++LG G  G V+K     +G  +A K +  +  
Sbjct: 12  QQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK 71

Query: 513 QG-QEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY-EYMPNKSLDFFL--FDSTKE 568
              + +   E++++ +     +V   G     + +I I  E+M   SLD  L       E
Sbjct: 72  PAIRNQIIRELQVLHECNSPYIVGFYGAFYS-DGEISICMEHMDGGSLDQVLKKAGRIPE 130

Query: 569 NLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG 628
            +LG     ++   + +GL YL    + +++HRD+K SNIL++     K+ DFG++    
Sbjct: 131 QILG-----KVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS---- 179

Query: 629 GDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
           G  + S     VGT  YMSPE  Q   +S++SD++S G+ L+E
Sbjct: 180 GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 222

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score =  133 bits (338), Expect = 6e-35
 Identities = 60/196 (30%), Positives = 101/196 (51%), Gaps = 10/196 (5%)

Query: 477 FSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR 535
           ++   K+G+G  G VY    +  GQEVA+++++ Q    +E   NEI ++ + ++ N+V 
Sbjct: 22  YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81

Query: 536 LLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSR 595
            L   +  +E  ++ EY+   SL     D   E  +  G    +     Q L +LH    
Sbjct: 82  YLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQALEFLHS--- 134

Query: 596 LRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGL 655
            +VIHRD+K+ NILL  D + K++DFG          QSK   +VGT  +M+PE   +  
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI--TPEQSKRSTMVGTPYWMAPEVVTRKA 192

Query: 656 FSIKSDVFSFGVLLLE 671
           +  K D++S G++ +E
Sbjct: 193 YGPKVDIWSLGIMAIE 208

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score =  134 bits (339), Expect = 7e-35
 Identities = 62/197 (31%), Positives = 103/197 (52%), Gaps = 12/197 (6%)

Query: 477 FSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR 535
             +  K+GEG  G V   R   +G++VAVK +  +  Q +E   NE+ ++   QH N+V 
Sbjct: 47  LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVE 106

Query: 536 LLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSR 595
           +    +  EE  ++ E++   +L     D   +  L       + E + Q L YLH    
Sbjct: 107 MYKSYLVGEELWVLMEFLQGGALT----DIVSQVRLNEEQIATVCEAVLQALAYLHA--- 159

Query: 596 LRVIHRDLKASNILLDKDMNPKISDFGM-ARIFGGDELQSKTKRIVGTYGYMSPEYAQQG 654
             VIHRD+K+ +ILL  D   K+SDFG  A+I    +   K K +VGT  +M+PE   + 
Sbjct: 160 QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQI---SKDVPKRKSLVGTPYWMAPEVISRS 216

Query: 655 LFSIKSDVFSFGVLLLE 671
           L++ + D++S G++++E
Sbjct: 217 LYATEVDIWSLGIMVIE 233

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  133 bits (336), Expect = 2e-34
 Identities = 64/294 (21%), Positives = 102/294 (34%), Gaps = 49/294 (16%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKL-QHR 531
           +F   ++LG G +G V+K R   +G+  AVK      +  + +     E+    K+ QH 
Sbjct: 58  SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHP 117

Query: 532 NLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTK---ENLLGWGTRVRIIEGIAQGLL 588
             VRL     E     L  E     SL            E  +       + +     L 
Sbjct: 118 CCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQV----WGYLRD-TLLALA 171

Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSP 648
           +LH      ++H D+K +NI L      K+ DFG+    G        +   G   YM+P
Sbjct: 172 HLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA---GAGEVQEGDPRYMAP 225

Query: 649 EYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP 708
           E  Q   +   +DVFS G+ +LE   +               G  W   +          
Sbjct: 226 ELLQGS-YGTAADVFSLGLTILEVACNMEL--PHG-------GEGWQQLRQGYLPPEFTA 275

Query: 709 TLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHP--RQP 760
            L +E   ++        ++ ++ D   R T   +          L  P  RQP
Sbjct: 276 GLSSELRSVL--------VMMLEPDPKLRATAEAL----------LALPVLRQP 311

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score =  133 bits (336), Expect = 2e-34
 Identities = 48/216 (22%), Positives = 88/216 (40%), Gaps = 24/216 (11%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLS-SQSGQGQEEFKNEIKLIAKLQHRNL 533
            +   + LG+G    V++GR    G   A+K  +     +  +    E +++ KL H+N+
Sbjct: 10  LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNI 69

Query: 534 VRLLGCCIELEEKILIY---EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYL 590
           V+L     E           E+ P  SL   L + +    L     + ++  +  G+ +L
Sbjct: 70  VKLFAI-EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL 128

Query: 591 HQYSRLRVIHRDLKASNILL----DKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
            +     ++HR++K  NI+     D     K++DFG AR    DE   +   + GT  Y+
Sbjct: 129 RE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE---QFVSLYGTEEYL 182

Query: 647 SPE--------YAQQGLFSIKSDVFSFGVLLLETLS 674
            P+           Q  +    D++S GV      +
Sbjct: 183 HPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAAT 218

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score =  130 bits (330), Expect = 5e-34
 Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 21/200 (10%)

Query: 483 LGEGGFGPVYKGR-LLNGQEVAVKRLS----SQSGQGQEEFKNEIKLIAKLQHRNLVRLL 537
           LG+G F  VY+   +  G EVA+K +      ++G   +  +NE+K+  +L+H +++ L 
Sbjct: 19  LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGM-VQRVQNEVKIHCQLKHPSILELY 77

Query: 538 GCCIELEEKI-LIYEYMPNKSLDFFLFDSTKEN---LLGWGTRVRIIEGIAQGLLYLHQY 593
               E    + L+ E   N  +        K           R   +  I  G+LYLH +
Sbjct: 78  NY-FEDSNYVYLVLEMCHNGEM----NRYLKNRVKPFSENEAR-HFMHQIITGMLYLHSH 131

Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQ 653
               ++HRDL  SN+LL ++MN KI+DFG+A        +  T  + GT  Y+SPE A +
Sbjct: 132 ---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISPEIATR 186

Query: 654 GLFSIKSDVFSFGVLLLETL 673
               ++SDV+S G +    L
Sbjct: 187 SAHGLESDVWSLGCMFYTLL 206

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score =  133 bits (336), Expect = 8e-34
 Identities = 48/211 (22%), Positives = 87/211 (41%), Gaps = 24/211 (11%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLS-SQSGQGQEEFKNEIKLIAKLQHRNL 533
            +   + LG+G    V++GR    G   A+K  +     +  +    E +++ KL H+N+
Sbjct: 10  LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNI 69

Query: 534 VRLLGCCIELEEKILIY---EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYL 590
           V+L     E           E+ P  SL   L + +    L     + ++  +  G+ +L
Sbjct: 70  VKLF-AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL 128

Query: 591 HQYSRLRVIHRDLKASNILL----DKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
            +     ++HR++K  NI+     D     K++DFG AR    DE   +   + GT  Y+
Sbjct: 129 RE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE---QFVSLYGTEEYL 182

Query: 647 SPE--------YAQQGLFSIKSDVFSFGVLL 669
            P+           Q  +    D++S GV  
Sbjct: 183 HPDMYERAVLRKDHQKKYGATVDLWSIGVTF 213

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score =  127 bits (321), Expect = 9e-33
 Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 26/209 (12%)

Query: 477 FSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG-QGQEEFKNEIK-LIAKLQHRNL 533
                +LG G +G V K R + +GQ +AVKR+ +    Q Q+    ++   +  +     
Sbjct: 9   LEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFT 68

Query: 534 VRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTK------ENLLGWGTRVRIIEGIAQGL 587
           V   G      +  +  E M + SLD F            E++LG     +I   I + L
Sbjct: 69  VTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILG-----KIAVSIVKAL 122

Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRI-VGTYGYM 646
            +LH  S+L VIHRD+K SN+L++     K+ DFG++    G  +    K I  G   YM
Sbjct: 123 EHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGIS----GYLVDDVAKDIDAGCKPYM 176

Query: 647 SPE----YAQQGLFSIKSDVFSFGVLLLE 671
           +PE       Q  +S+KSD++S G+ ++E
Sbjct: 177 APERINPELNQKGYSVKSDIWSLGITMIE 205

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score =  128 bits (323), Expect = 1e-32
 Identities = 68/322 (21%), Positives = 116/322 (36%), Gaps = 47/322 (14%)

Query: 480 ENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQ-HRNLVRLL 537
              L EGGF  VY+ + + +G+E A+KRL S   +       E+  + KL  H N+V+  
Sbjct: 33  RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFC 92

Query: 538 GCCIELEEK-------ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYL 590
                 +E+        L+   +    L  FL        L   T ++I     + + ++
Sbjct: 93  SAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHM 152

Query: 591 HQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRI----------V 640
           H   +  +IHRDLK  N+LL      K+ DFG A         S + +            
Sbjct: 153 H-RQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRN 211

Query: 641 GTYGYMSPE----YAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDL 696
            T  Y +PE    Y+   +   K D+++ G +L       R   F +   L ++   + +
Sbjct: 212 TTPMYRTPEIIDLYSNFPI-GEKQDIWALGCILYLLCF--RQHPFEDGAKLRIVNGKYSI 268

Query: 697 WKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVV----SMLTNKTI 752
                       T       LI           +Q +  +R ++ EVV     +   + +
Sbjct: 269 --------PPHDTQYTVFHSLIRA--------MLQVNPEERLSIAEVVHQLQEIAAARNV 312

Query: 753 NLPHPRQPAFSSIRGLKNTILP 774
           N   P         G  +  L 
Sbjct: 313 NPKSPITELLEQNGGYGSATLS 334

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score =  133 bits (335), Expect = 2e-32
 Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 19/206 (9%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEE-FKNEIKLIAKLQHRNL 533
            +  + +LG GGFG V +      G++VA+K+   +      E +  EI+++ KL H N+
Sbjct: 15  PWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNV 74

Query: 534 VRLLGCCIELEEKI-------LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQG 586
           V       +  +K+       L  EY     L  +L        L  G    ++  I+  
Sbjct: 75  VSAR-EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA 133

Query: 587 LLYLHQYSRLRVIHRDLKASNILLD---KDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           L YLH+    R+IHRDLK  NI+L    + +  KI D G A+     EL ++    VGT 
Sbjct: 134 LRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTE---FVGTL 187

Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLL 669
            Y++PE  +Q  +++  D +SFG L 
Sbjct: 188 QYLAPELLEQKKYTVTVDYWSFGTLA 213

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score =  130 bits (328), Expect = 2e-32
 Identities = 60/297 (20%), Positives = 108/297 (36%), Gaps = 51/297 (17%)

Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKL-QHRNLV 534
           +F  ++ LG G  G +    + + ++VAVKR+  +          E++L+ +  +H N++
Sbjct: 25  SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVI 81

Query: 535 RLLGCCIELEEKI-LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY 593
           R   C  +  +   +  E       ++      K+        + +++    GL +LH  
Sbjct: 82  RYF-CTEKDRQFQYIAIELCAATLQEYVE---QKDFAHLGLEPITLLQQTTSGLAHLHS- 136

Query: 594 SRLRVIHRDLKASNILL-----DKDMNPKISDFGMARIFGGDEL-QSKTKRIVGTYGYMS 647
             L ++HRDLK  NIL+        +   ISDFG+ +         S+   + GT G+++
Sbjct: 137 --LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIA 194

Query: 648 PEYAQQGLF---SIKSDVFSFGVLLLETLSSKR----NTDFSNTNSLTLLGHAWDLWKDD 700
           PE   +      +   D+FS G +    +S        +     N L             
Sbjct: 195 PEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSL----DCL 250

Query: 701 RAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHP 757
              +  D      A  LI           +  D   RP+   V          L HP
Sbjct: 251 HPEKHEDV----IARELIEK--------MIAMDPQKRPSAKHV----------LKHP 285

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score =  127 bits (321), Expect = 2e-32
 Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 27/211 (12%)

Query: 476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKL-QHRN 532
           +     ++G G +G V K     +GQ +AVKR+ S    + Q++   ++ ++ +      
Sbjct: 23  DLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPY 82

Query: 533 LVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTK-------ENLLGWGTRVRIIEGIAQ 585
           +V+  G      +  +  E M + S D F             E +LG     +I     +
Sbjct: 83  IVQFYGALFREGDCWICMELM-STSFDKFYKYVYSVLDDVIPEEILG-----KITLATVK 136

Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRI-VGTYG 644
            L +L     L++IHRD+K SNILLD+  N K+ DFG++    G  + S  K    G   
Sbjct: 137 ALNHLK--ENLKIIHRDIKPSNILLDRSGNIKLCDFGIS----GQLVDSIAKTRDAGCRP 190

Query: 645 YMSPE----YAQQGLFSIKSDVFSFGVLLLE 671
           YM+PE     A +  + ++SDV+S G+ L E
Sbjct: 191 YMAPERIDPSASRQGYDVRSDVWSLGITLYE 221

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score =  126 bits (318), Expect = 3e-32
 Identities = 58/201 (28%), Positives = 97/201 (48%), Gaps = 21/201 (10%)

Query: 482 KLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQE---EFKNEIKLIAKLQHRNLVRLL 537
           KLG GG   VY     +   +VA+K +     + +E    F+ E+   ++L H+N+V ++
Sbjct: 18  KLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMI 77

Query: 538 --GCCIELEEKILIY---EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
                   EE    Y   EY+   +L  ++        L   T +     I  G+ + H 
Sbjct: 78  DVD-----EEDDCYYLVMEYIEGPTLSEYI---ESHGPLSVDTAINFTNQILDGIKHAH- 128

Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ 652
              +R++HRD+K  NIL+D +   KI DFG+A+      L ++T  ++GT  Y SPE A+
Sbjct: 129 --DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL-TQTNHVLGTVQYFSPEQAK 185

Query: 653 QGLFSIKSDVFSFGVLLLETL 673
                  +D++S G++L E L
Sbjct: 186 GEATDECTDIYSIGIVLYEML 206

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score =  125 bits (317), Expect = 4e-32
 Identities = 58/199 (29%), Positives = 103/199 (51%), Gaps = 15/199 (7%)

Query: 477 FSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNLV 534
           F+   K+G+G FG V+KG      + VA+K +  +  + + E+ + EI ++++     + 
Sbjct: 24  FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83

Query: 535 RLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
           +  G  ++  +  +I EY+   S      D  +   L       I+  I +GL YLH   
Sbjct: 84  KYYGSYLKDTKLWIIMEYLGGGSAL----DLLEPGPLDETQIATILREILKGLDYLH--- 136

Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKR--IVGTYGYMSPEYAQ 652
             + IHRD+KA+N+LL +    K++DFG+A    G    ++ KR   VGT  +M+PE  +
Sbjct: 137 SEKKIHRDIKAANVLLSEHGEVKLADFGVA----GQLTDTQIKRNTFVGTPFWMAPEVIK 192

Query: 653 QGLFSIKSDVFSFGVLLLE 671
           Q  +  K+D++S G+  +E
Sbjct: 193 QSAYDSKADIWSLGITAIE 211

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score =  125 bits (316), Expect = 5e-32
 Identities = 59/304 (19%), Positives = 109/304 (35%), Gaps = 62/304 (20%)

Query: 466 SLASVSAATANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKR--LSSQSGQGQEEFKNEI 522
           ++   S  T  F    K+G G FG V+K    L+G   A+KR          ++    E+
Sbjct: 2   AMGMKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREV 61

Query: 523 KLIAKL-QHRNLVRLLGCCIELEEKILIY-EYMPNKSLDFFLFDSTKENLLGWGTRVRII 580
              A L QH ++VR      E ++ +LI  EY    SL   + ++ +         ++ +
Sbjct: 62  YAHAVLGQHSHVVRYFSAWAE-DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDL 120

Query: 581 EG-IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNP-------------------KISD 620
              + +GL Y+H    + ++H D+K SNI + +   P                   KI D
Sbjct: 121 LLQVGRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGD 177

Query: 621 FGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNT 679
            G           S  +   G   +++ E  Q+      K+D+F+  + ++    ++   
Sbjct: 178 LGHVTRI------SSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAE--- 228

Query: 680 DFSNTNSLTLLGHAWDLWKDDRAWELID----PTLQNEASYLILNRYINVGLLCVQEDAA 735
                           L ++   W  I     P +    S       +    + +  D  
Sbjct: 229 ---------------PLPRNGDQWHEIRQGRLPRIPQVLSQE-FTELLK---VMIHPDPE 269

Query: 736 DRPT 739
            RP+
Sbjct: 270 RRPS 273

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score =  126 bits (319), Expect = 6e-32
 Identities = 52/217 (23%), Positives = 92/217 (42%), Gaps = 33/217 (15%)

Query: 482 KLGEGGFGPVYKGRLLNGQEVAVKRLS-----------------SQSGQGQEEFKNEIKL 524
            L +G F  +      + +  A+K+                          ++FKNE+++
Sbjct: 38  TLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQI 96

Query: 525 IAKLQHRNLVRLLGCCIELEEKI-LIYEYMPNKSL-----DFFLFDSTKENLLGWGTRVR 578
           I  +++   +   G  I   +++ +IYEYM N S+      FF+ D      +       
Sbjct: 97  ITDIKNEYCLTCEGI-ITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKC 155

Query: 579 IIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKR 638
           II+ +     Y+H  +   + HRD+K SNIL+DK+   K+SDFG +      +++     
Sbjct: 156 IIKSVLNSFSYIH--NEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKG---- 209

Query: 639 IVGTYGYMSPE--YAQQGLFSIKSDVFSFGVLLLETL 673
             GTY +M PE    +      K D++S G+ L    
Sbjct: 210 SRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMF 246

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score =  125 bits (316), Expect = 2e-31
 Identities = 38/352 (10%), Positives = 74/352 (21%), Gaps = 64/352 (18%)

Query: 438 SIATRANELCKGNKAANSRTRDSWFPMFSLASV----SAATANFSTENKLGEGGFGPVYK 493
            I     E  K   A       + +P  +  +V    S           L  G    V+ 
Sbjct: 21  LIGYCREEALKEPAAMVEAVTATVWPQNAETTVDSLLSQGERKLKLVEPLRVGDRSVVFL 80

Query: 494 GR-LLNGQEVAVKRL---SSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL------ 543
            R +   ++ A+K     +  S    E         A+L   +          L      
Sbjct: 81  VRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140

Query: 544 --------------------EEKILIYEYMP---NKSLDFFLFDSTKENLLGWGTRVRII 580
                                  +L+                F        G      + 
Sbjct: 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHILT 200

Query: 581 EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIV 640
             + +    L       ++H      N+ +  D    + D       G     ++     
Sbjct: 201 AQLIRLAANLQ---SKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVG-----TRGPASS 252

Query: 641 GTYGYMSPEYAQQG--LFSIKSDVFSFGVLLLETLSSK-----RNTDFSNTNSLTLLGHA 693
               Y   E+       F+   + +  G+ +                   +     L   
Sbjct: 253 VPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVP 312

Query: 694 WDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVS 745
                   +   +   ++     LI         L    D   R    E + 
Sbjct: 313 GTDSLAFGSCTPLPDFVKT----LIG------RFLNF--DRRRRLLPLEAME 352

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score =  123 bits (310), Expect = 4e-31
 Identities = 55/206 (26%), Positives = 106/206 (51%), Gaps = 23/206 (11%)

Query: 477 FSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR 535
           +    +LG+G FG VYK +    G   A K + ++S +  E++  EI+++A   H  +V+
Sbjct: 21  WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 80

Query: 536 LLGCCIELEEKILIYEYMPNKSLDFFLFDSTK---ENLLGWGTRVRIIEGIAQGLLYLHQ 592
           LLG      +  ++ E+ P  ++D  + +  +   E  +       +   + + L +LH 
Sbjct: 81  LLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV-----VCRQMLEALNFLHS 135

Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKR--IVGTYGYMSPE- 649
               R+IHRDLKA N+L+  + + +++DFG++       L++  KR   +GT  +M+PE 
Sbjct: 136 ---KRIIHRDLKAGNVLMTLEGDIRLADFGVS----AKNLKTLQKRDSFIGTPYWMAPEV 188

Query: 650 ----YAQQGLFSIKSDVFSFGVLLLE 671
                 +   +  K+D++S G+ L+E
Sbjct: 189 VMCETMKDTPYDYKADIWSLGITLIE 214

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score =  123 bits (310), Expect = 5e-31
 Identities = 56/200 (28%), Positives = 102/200 (51%), Gaps = 12/200 (6%)

Query: 474 TANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRN 532
              F    KLGEG +G VYK      GQ VA+K++  +     +E   EI ++ +    +
Sbjct: 28  EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE--SDLQEIIKEISIMQQCDSPH 85

Query: 533 LVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
           +V+  G   +  +  ++ EY    S+   +    +   L       I++   +GL YLH 
Sbjct: 86  VVKYYGSYFKNTDLWIVMEYCGAGSVSDII--RLRNKTLTEDEIATILQSTLKGLEYLHF 143

Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGM-ARIFGGDELQSKTKRIVGTYGYMSPEYA 651
              +R IHRD+KA NILL+ + + K++DFG+  ++    +  +K   ++GT  +M+PE  
Sbjct: 144 ---MRKIHRDIKAGNILLNTEGHAKLADFGVAGQL---TDTMAKRNTVIGTPFWMAPEVI 197

Query: 652 QQGLFSIKSDVFSFGVLLLE 671
           Q+  ++  +D++S G+  +E
Sbjct: 198 QEIGYNCVADIWSLGITAIE 217

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score =  128 bits (323), Expect = 7e-31
 Identities = 44/207 (21%), Positives = 82/207 (39%), Gaps = 30/207 (14%)

Query: 482 KLGEGGFGPVYKGR--LLNGQEVAVKRLSSQSGQG-QEEFKNEIKLIAKLQHRNLVRLL- 537
            +  GG G +Y      +NG+ V +K L        Q     E + +A++ H ++V++  
Sbjct: 87  CIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFN 146

Query: 538 -GCCIELEEKILIY---EYMPNKSLDFFLFDSTKENL---LGWGTRVRIIEGIAQGLLYL 590
                +     + Y   EY+  +SL        K +    L     +  +  I   L YL
Sbjct: 147 FVEHTDRHGDPVGYIVMEYVGGQSL--------KRSKGQKLPVAEAIAYLLEILPALSYL 198

Query: 591 HQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEY 650
           H    + +++ DLK  NI+L ++   K+ D G                + GT G+ +PE 
Sbjct: 199 H---SIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINS------FGYLYGTPGFQAPEI 248

Query: 651 AQQGLFSIKSDVFSFGVLLLETLSSKR 677
            + G  ++ +D+++ G  L        
Sbjct: 249 VRTGP-TVATDIYTVGRTLAALTLDLP 274

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score =  125 bits (316), Expect = 7e-31
 Identities = 70/316 (22%), Positives = 111/316 (35%), Gaps = 70/316 (22%)

Query: 477 FSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKL-QHRNLVR 535
             +E  LG G  G V       G+ VAVKR+        +    EIKL+ +   H N++R
Sbjct: 17  VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIR 73

Query: 536 LLGCCIELEEKI-LIYEYMPNKSLDFFL---FDSTKENLLGWGTRVRIIEGIAQGLLYLH 591
              C    +  + +  E       D             L      + ++  IA G+ +LH
Sbjct: 74  YY-CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH 132

Query: 592 QYSRLRVIHRDLKASNILLD-------------KDMNPKISDFGMARIFGGDE--LQSKT 636
               L++IHRDLK  NIL+              +++   ISDFG+ +     +   ++  
Sbjct: 133 S---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNL 189

Query: 637 KRIVGTYGYMSPEYAQQGLFSI-------KSDVFSFGVLLLETLSSK------RNTDFSN 683
               GT G+ +PE  ++              D+FS G +    LS        + +  SN
Sbjct: 190 NNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESN 249

Query: 684 --TNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMF 741
                 +L        +           L  EA+ LI        ++    D   RPT  
Sbjct: 250 IIRGIFSLDEMKCLHDRS----------LIAEATDLISQ------MIDH--DPLKRPTAM 291

Query: 742 EVVSMLTNKTINLPHP 757
           +V          L HP
Sbjct: 292 KV----------LRHP 297

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score =  121 bits (307), Expect = 1e-30
 Identities = 49/203 (24%), Positives = 84/203 (41%), Gaps = 21/203 (10%)

Query: 480 ENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQG---QEEFKNEIKLIAKLQHRNLVR 535
              +G GG G VY+    +  + VA+K +S         +   + E +   +LQ  ++V 
Sbjct: 39  RRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVP 98

Query: 536 L--LGCCIELEEKILIY---EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYL 590
           +   G     E    +Y     +    L   L    ++  L     V I+  I   L   
Sbjct: 99  IHDFG-----EIDGQLYVDMRLINGVDLAAML---RRQGPLAPPRAVAIVRQIGSALDAA 150

Query: 591 HQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEY 650
           H        HRD+K  NIL+  D    + DFG+A     ++L ++    VGT  YM+PE 
Sbjct: 151 H---AAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKL-TQLGNTVGTLYYMAPER 206

Query: 651 AQQGLFSIKSDVFSFGVLLLETL 673
             +   + ++D+++   +L E L
Sbjct: 207 FSESHATYRADIYALTCVLYECL 229

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score =  120 bits (303), Expect = 2e-30
 Identities = 61/204 (29%), Positives = 95/204 (46%), Gaps = 18/204 (8%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLS----SQSGQGQEEFKNEIKLIAKLQH 530
           +F     LG+G FG VY  R   +   +A+K L      ++G  + + + E+++ + L+H
Sbjct: 10  DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSHLRH 68

Query: 531 RNLVRLLGCCIELEEKI-LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLY 589
            N++RL G       ++ LI EY P  ++   L    K +          I  +A  L Y
Sbjct: 69  PNILRLYGY-FHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSY 124

Query: 590 LHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPE 649
            H     RVIHRD+K  N+LL      KI+DFG +         S+   + GT  Y+ PE
Sbjct: 125 CH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS----SRRTDLCGTLDYLPPE 177

Query: 650 YAQQGLFSIKSDVFSFGVLLLETL 673
             +  +   K D++S GVL  E L
Sbjct: 178 MIEGRMHDEKVDLWSLGVLCYEFL 201

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score =  121 bits (306), Expect = 2e-30
 Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 22/206 (10%)

Query: 477 FSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKL-QHRNL 533
                ++G G  G V+K R    G  +AVK++      +  +    ++ ++ K      +
Sbjct: 27  LENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYI 86

Query: 534 VRLLGCCIELEEKILIYEYMPNKSLDFFL--FDSTKENLLGWGTRVRIIEGIAQGLLYLH 591
           V+  G  I   +  +  E M   +            E +LG     ++   I + L YL 
Sbjct: 87  VQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILG-----KMTVAIVKALYYLK 141

Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRI-VGTYGYMSPE- 649
              +  VIHRD+K SNILLD+    K+ DFG++    G  +  K K    G   YM+PE 
Sbjct: 142 --EKHGVIHRDVKPSNILLDERGQIKLCDFGIS----GRLVDDKAKDRSAGCAAYMAPER 195

Query: 650 ----YAQQGLFSIKSDVFSFGVLLLE 671
                  +  + I++DV+S G+ L+E
Sbjct: 196 IDPPDPTKPDYDIRADVWSLGISLVE 221

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score =  120 bits (304), Expect = 3e-30
 Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 15/205 (7%)

Query: 482 KLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQE---EFKNEIKLIAKLQHRNLVRLL 537
            LG GG   V+  R L + ++VAVK L +   +       F+ E +  A L H  +V + 
Sbjct: 19  ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78

Query: 538 GCCIELEEKILIY----EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY 593
                      +     EY+   +L   +     E  +     + +I    Q L + H  
Sbjct: 79  DTGEAETPAGPLPYIVMEYVDGVTLRDIV---HTEGPMTPKRAIEVIADACQALNFSH-- 133

Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ-SKTKRIVGTYGYMSPEYAQ 652
            +  +IHRD+K +NI++      K+ DFG+AR         ++T  ++GT  Y+SPE A+
Sbjct: 134 -QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192

Query: 653 QGLFSIKSDVFSFGVLLLETLSSKR 677
                 +SDV+S G +L E L+ + 
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEP 217

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score =  120 bits (303), Expect = 3e-30
 Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 22/211 (10%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNL 533
           ++  +  +G G    V         ++VA+KR++ +  Q   +E   EI+ +++  H N+
Sbjct: 16  DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 75

Query: 534 VRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIE--GIA------- 584
           V      +  +E  L+ + +   S+     D  K  +     +  +++   IA       
Sbjct: 76  VSYYTSFVVKDELWLVMKLLSGGSV----LDIIKHIVAKGEHKSGVLDESTIATILREVL 131

Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGM-ARIFGGDELQSKTKR--IVG 641
           +GL YLH   +   IHRD+KA NILL +D + +I+DFG+ A +  G ++     R   VG
Sbjct: 132 EGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 188

Query: 642 TYGYMSPEYAQQGL-FSIKSDVFSFGVLLLE 671
           T  +M+PE  +Q   +  K+D++SFG+  +E
Sbjct: 189 TPCWMAPEVMEQVRGYDFKADIWSFGITAIE 219

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score =  120 bits (303), Expect = 8e-30
 Identities = 64/204 (31%), Positives = 98/204 (48%), Gaps = 23/204 (11%)

Query: 477 FSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFK---NEIKLIAKLQHRN 532
           FS   ++G G FG VY  R + N + VA+K++S    Q  E+++    E++ + KL+H N
Sbjct: 56  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115

Query: 533 LVRLLGCCIELEEKILIYEYMPNKSLDFFLFDST--KENLLGWGTRVRIIEGIAQGLLYL 590
            ++  GC +      L+ EY    + D         +E  +       +  G  QGL YL
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAA-----VTHGALQGLAYL 170

Query: 591 HQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPE- 649
           H      +IHRD+KA NILL +    K+ DFG A I       +     VGT  +M+PE 
Sbjct: 171 HS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIM------APANSFVGTPYWMAPEV 221

Query: 650 --YAQQGLFSIKSDVFSFGVLLLE 671
                +G +  K DV+S G+  +E
Sbjct: 222 ILAMDEGQYDGKVDVWSLGITCIE 245

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score =  120 bits (303), Expect = 2e-29
 Identities = 41/334 (12%), Positives = 90/334 (26%), Gaps = 80/334 (23%)

Query: 483 LGEGGFGPVYKGR-LLNGQEVAVKRLSSQ---SGQGQEEFKNEIKLIAKLQH-------- 530
           LG+       +      G+   V              ++ K E+  +  L+         
Sbjct: 86  LGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAK 145

Query: 531 --------RNLVRLLGCCIELEEK-----------ILIYEYMPNKSLDFF--LFDSTKEN 569
                    +LV+       +  +             +Y  M +    F   L   +  +
Sbjct: 146 VHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTH 205

Query: 570 -LLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG 628
             L    R+++   + + L  LH      ++H  L+  +I+LD+     ++ F       
Sbjct: 206 KSLVHHARLQLTLQVIRLLASLH---HYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRD- 261

Query: 629 GDELQSKTKRIVGTYGYMSPE-----YAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSN 683
           G    S   R        +            L +   D ++ G+ +     +      ++
Sbjct: 262 GASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCAD--LPNTD 319

Query: 684 TNSLTLLGHAWDLWKD--DRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMF 741
             +L      +   K+       L++                  G L  +    DR    
Sbjct: 320 DAALGGSEWIFRSCKNIPQPVRALLE------------------GFL--RYPKEDRLLPL 359

Query: 742 EVVSMLTNKTINLPHPRQPAFSSIRGLKNTILPA 775
           + +               P +  +R   +  LP 
Sbjct: 360 QAM-------------ETPEYEQLRTELSAALPL 380

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score =  117 bits (296), Expect = 3e-29
 Identities = 57/181 (31%), Positives = 94/181 (51%), Gaps = 18/181 (9%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKN----EIKLIAKLQH 530
           NF    K+GEG +G VYK R  L G+ VA+K++  +     E   +    EI L+ +L H
Sbjct: 4   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELNH 61

Query: 531 RNLVRLLGCCIELEEKILIYEYMPN--KSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLL 588
            N+V+LL       +  L++E++    K       D++    +        +  + QGL 
Sbjct: 62  PNIVKLLDVIHTENKLYLVFEFLHQDLKKF----MDASALTGIPLPLIKSYLFQLLQGLA 117

Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSP 648
           + H +   RV+HRDLK  N+L++ +   K++DFG+AR F G  +++ T  +V T  Y +P
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TLWYRAP 172

Query: 649 E 649
           E
Sbjct: 173 E 173

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score =  119 bits (300), Expect = 3e-29
 Identities = 49/222 (22%), Positives = 87/222 (39%), Gaps = 24/222 (10%)

Query: 466 SLASVSAATANFSTENKLGEG--GFGPVYKGR-LLNGQEVAVKR--LSSQSGQGQEEFKN 520
            ++S       +     +G+G      V   R    G+ V V+R  L + S +     + 
Sbjct: 16  GMSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQG 75

Query: 521 EIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKS----LDFFLFDSTKENLLGWGTR 576
           E+ +     H N+V      I   E  ++  +M   S    +     D   E  + +   
Sbjct: 76  ELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAY--- 132

Query: 577 VRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKT 636
             I++G+ + L Y+H    +  +HR +KAS+IL+  D    +S             + + 
Sbjct: 133 --ILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRV 187

Query: 637 -----KRIVGTYGYMSPEYAQQGL--FSIKSDVFSFGVLLLE 671
                K  V    ++SPE  QQ L  +  KSD++S G+   E
Sbjct: 188 VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACE 229

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score =  122 bits (308), Expect = 3e-29
 Identities = 58/263 (22%), Positives = 106/263 (40%), Gaps = 18/263 (6%)

Query: 412 SIYIRVPASELETKKSQDMLQFDINMSIATRANELCKGNKAANSRTRDSWFPMFSLASVS 471
           +  + +P  E + ++  D+   D    I      +              ++P        
Sbjct: 97  TAPVLIPGDERKRRRGYDV---DEQGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHD 153

Query: 472 AATANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQH 530
               ++    +LG G FG V++      G   A K + +     +E  + EI+ ++ L+H
Sbjct: 154 HVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRH 213

Query: 531 RNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFD--STKENLLGWGTRVRIIEGIAQGLL 588
             LV L     +  E ++IYE+M        LF+  + + N +     V  +  + +GL 
Sbjct: 214 PTLVNLHDAFEDDNEMVMIYEFMSGGE----LFEKVADEHNKMSEDEAVEYMRQVCKGLC 269

Query: 589 YLHQYSRLRVIHRDLKASNILL-DKDMNP-KISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           ++H+      +H DLK  NI+   K  N  K+ DFG+       +     K   GT  + 
Sbjct: 270 HMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ---SVKVTTGTAEFA 323

Query: 647 SPEYAQQGLFSIKSDVFSFGVLL 669
           +PE A+       +D++S GVL 
Sbjct: 324 APEVAEGKPVGYYTDMWSVGVLS 346

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score =  118 bits (296), Expect = 4e-29
 Identities = 64/334 (19%), Positives = 108/334 (32%), Gaps = 83/334 (24%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLS-SQSGQGQEEFKNEIKLIAKLQHRNL 533
           +F     +G GGFG V++ +  ++    A+KR+        +E+   E+K +AKL+H  +
Sbjct: 7   DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 66

Query: 534 VRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTK---------------ENLLGWGTRVR 578
           VR     +E   +    E       D                       +      T  +
Sbjct: 67  VRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQ 126

Query: 579 IIEGIAQGLLY----------LHQYSRLR-----------------------------VI 599
           +     +  LY          L  +   R                             ++
Sbjct: 127 LQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLM 186

Query: 600 HRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTK----------RIVGTYGYMSPE 649
           HRDLK SNI    D   K+ DFG+      DE +                VGT  YMSPE
Sbjct: 187 HRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPE 246

Query: 650 YAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT 709
                 +S K D+FS G++L E L    +T       +T +         +  + L+   
Sbjct: 247 QIHGNNYSHKVDIFSLGLILFE-LLYSFSTQMERVRIITDV--------RNLKFPLLFTQ 297

Query: 710 LQNEASYLILNRYINVGLLCVQEDAADRPTMFEV 743
              +   ++           +     +RP   ++
Sbjct: 298 KYPQEHMMV--------QDMLSPSPTERPEATDI 323

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score =  117 bits (295), Expect = 1e-28
 Identities = 48/201 (23%), Positives = 88/201 (43%), Gaps = 15/201 (7%)

Query: 474 TANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRN 532
              +    +LG G FG V++      G+    K +++     +   KNEI ++ +L H  
Sbjct: 50  YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPK 109

Query: 533 LVRLLGCCIELEEKILIYEYMPNKSLDFFLFD--STKENLLGWGTRVRIIEGIAQGLLYL 590
           L+ L     +  E +LI E++    L    FD  + ++  +     +  +    +GL ++
Sbjct: 110 LINLHDAFEDKYEMVLILEFLSGGEL----FDRIAAEDYKMSEAEVINYMRQACEGLKHM 165

Query: 591 HQYSRLRVIHRDLKASNILL-DKDMNP-KISDFGMARIFGGDELQSKTKRIVGTYGYMSP 648
           H+     ++H D+K  NI+   K  +  KI DFG+A     DE     K    T  + +P
Sbjct: 166 HE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE---IVKVTTATAEFAAP 219

Query: 649 EYAQQGLFSIKSDVFSFGVLL 669
           E   +      +D+++ GVL 
Sbjct: 220 EIVDREPVGFYTDMWAIGVLG 240

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score =  117 bits (294), Expect = 2e-28
 Identities = 60/199 (30%), Positives = 99/199 (49%), Gaps = 15/199 (7%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
             S    LG G FG V+K      G ++A K + ++  + +EE KNEI ++ +L H NL+
Sbjct: 90  TVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLI 149

Query: 535 RLLGCCIELEEKILIYEYMPNKSLDFFLFDS--TKENLLGWGTRVRIIEGIAQGLLYLHQ 592
           +L        + +L+ EY+    L    FD    +   L     +  ++ I +G+ ++HQ
Sbjct: 150 QLYDAFESKNDIVLVMEYVDGGEL----FDRIIDESYNLTELDTILFMKQICEGIRHMHQ 205

Query: 593 YSRLRVIHRDLKASNILL-DKDMNP-KISDFGMARIFGGDELQSKTKRIVGTYGYMSPEY 650
              + ++H DLK  NIL  ++D    KI DFG+AR +   E   K K   GT  +++PE 
Sbjct: 206 ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE---KLKVNFGTPEFLAPEV 259

Query: 651 AQQGLFSIKSDVFSFGVLL 669
                 S  +D++S GV+ 
Sbjct: 260 VNYDFVSFPTDMWSVGVIA 278

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score =  115 bits (289), Expect = 2e-28
 Identities = 56/205 (27%), Positives = 91/205 (44%), Gaps = 20/205 (9%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLS----SQSGQGQEEFKNEIKLIAKLQH 530
           +F     LG+G FG VY  R   N   +A+K L      + G  + + + EI++ + L+H
Sbjct: 15  DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV-EHQLRREIEIQSHLRH 73

Query: 531 RNLVRLLGCCIELEEKI-LIYEYMPNKSLDFFLFDS-TKENLLGWGTRVRIIEGIAQGLL 588
            N++R+        ++I L+ E+ P   L    +    K            +E +A  L 
Sbjct: 74  PNILRMYNY-FHDRKRIYLMLEFAPRGEL----YKELQKHGRFDEQRSATFMEELADALH 128

Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSP 648
           Y H     +VIHRD+K  N+L+      KI+DFG +          + + + GT  Y+ P
Sbjct: 129 YCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRTMCGTLDYLPP 181

Query: 649 EYAQQGLFSIKSDVFSFGVLLLETL 673
           E  +      K D++  GVL  E L
Sbjct: 182 EMIEGKTHDEKVDLWCAGVLCYEFL 206

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score =  114 bits (288), Expect = 2e-28
 Identities = 51/206 (24%), Positives = 89/206 (43%), Gaps = 21/206 (10%)

Query: 474 TANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLS-SQSGQGQEEFKNEIKLIAKLQHR 531
              F  + KLG G FG V+      +G E  +K ++  +S    E+ + EI+++  L H 
Sbjct: 21  DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHP 80

Query: 532 NLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTR-----VRIIEGIAQG 586
           N++++     +     ++ E      L     +                   +++ +   
Sbjct: 81  NIIKIFEVFEDYHNMYIVMETCEGGEL----LERIVSAQARGKALSEGYVAELMKQMMNA 136

Query: 587 LLYLHQYSRLRVIHRDLKASNILL---DKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
           L Y H      V+H+DLK  NIL          KI DFG+A +F  DE    +    GT 
Sbjct: 137 LAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE---HSTNAAGTA 190

Query: 644 GYMSPEYAQQGLFSIKSDVFSFGVLL 669
            YM+PE  ++ + + K D++S GV++
Sbjct: 191 LYMAPEVFKRDV-TFKCDIWSAGVVM 215

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score =  115 bits (289), Expect = 3e-28
 Identities = 65/209 (31%), Positives = 102/209 (48%), Gaps = 22/209 (10%)

Query: 477 FSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKL-QHRNLV 534
           F     +G G +G VYKGR +  GQ  A+K +   +G  +EE K EI ++ K   HRN+ 
Sbjct: 26  FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDV-TGDEEEEIKQEINMLKKYSHHRNIA 84

Query: 535 RLLGC-----CIELEEKI-LIYEYMPNKSL-DFFLFDSTKENLLGWGTRVRIIEGIAQGL 587
              G         +++++ L+ E+    S+ D  L  +TK N L       I   I +GL
Sbjct: 85  TYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTD--LIKNTKGNTLKEEWIAYICREILRGL 142

Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
            +LHQ    +VIHRD+K  N+LL ++   K+ DFG++     D    +    +GT  +M+
Sbjct: 143 SHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL--DRTVGRRNTFIGTPYWMA 197

Query: 648 PEYAQQGLFS-----IKSDVFSFGVLLLE 671
           PE              KSD++S G+  +E
Sbjct: 198 PEVIACDENPDATYDFKSDLWSLGITAIE 226

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score =  114 bits (288), Expect = 5e-28
 Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 25/186 (13%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKN-----EIKLIAKLQ 529
            F    KLG G +  VYKG     G  VA+K +        EE        EI L+ +L+
Sbjct: 6   QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLD----SEEGTPSTAIREISLMKELK 61

Query: 530 HRNLVRLLGCCIELEEKILIYEYMPN--KSLDFFLFDSTKENLLGWGTRVRIIEGIA--- 584
           H N+VRL        +  L++E+M N  K       DS        G  + +++      
Sbjct: 62  HENIVRLYDVIHTENKLTLVFEFMDNDLKKY----MDSRTVGNTPRGLELNLVKYFQWQL 117

Query: 585 -QGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTY 643
            QGL + H+    +++HRDLK  N+L++K    K+ DFG+AR F G  + + +  +V T 
Sbjct: 118 LQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAF-GIPVNTFSSEVV-TL 172

Query: 644 GYMSPE 649
            Y +P+
Sbjct: 173 WYRAPD 178

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score =  115 bits (289), Expect = 6e-28
 Identities = 50/207 (24%), Positives = 84/207 (40%), Gaps = 23/207 (11%)

Query: 477 FSTENKLGEGGFGPVYKGR-LLNGQEVAVK-----RLSSQSGQGQEEFKNEIKLIAKLQH 530
           +     +G+G F  V +      GQ+ AVK     + +S  G   E+ K E  +   L+H
Sbjct: 26  YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85

Query: 531 RNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDS--TKENLLGWGT-RV--RIIEGIAQ 585
            ++V LL          +++E+M        L      + +     +  V    +  I +
Sbjct: 86  PHIVELLETYSSDGMLYMVFEFMDGAD----LCFEIVKRADAGFVYSEAVASHYMRQILE 141

Query: 586 GLLYLHQYSRLRVIHRDLKASNILL---DKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
            L Y H      +IHRD+K   +LL   +     K+  FG+A   G           VGT
Sbjct: 142 ALRYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGES--GLVAGGRVGT 196

Query: 643 YGYMSPEYAQQGLFSIKSDVFSFGVLL 669
             +M+PE  ++  +    DV+  GV+L
Sbjct: 197 PHFMAPEVVKREPYGKPVDVWGCGVIL 223

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score =  113 bits (285), Expect = 9e-28
 Identities = 56/197 (28%), Positives = 85/197 (43%), Gaps = 16/197 (8%)

Query: 483 LGEGGFGPVYKGR-LLNGQEVAVKRLS----SQSGQGQEEFKNEIKLIAKLQHRNLVRLL 537
           LGEG +G V +          AVK L      +   G+   K EI+L+ +L+H+N+++L+
Sbjct: 13  LGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLV 72

Query: 538 GCCIELEEKILIY---EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
              +  EEK  +Y   EY      +  + DS  E              +  GL YLH   
Sbjct: 73  DV-LYNEEKQKMYMVMEYCVCGMQE--MLDSVPEKRFPVCQAHGYFCQLIDGLEYLH--- 126

Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ-Q 653
              ++H+D+K  N+LL      KIS  G+A            +   G+  +  PE A   
Sbjct: 127 SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGL 186

Query: 654 GLFS-IKSDVFSFGVLL 669
             FS  K D++S GV L
Sbjct: 187 DTFSGFKVDIWSAGVTL 203

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score =  112 bits (283), Expect = 1e-27
 Identities = 51/187 (27%), Positives = 93/187 (49%), Gaps = 31/187 (16%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKN--------EIKLIA 526
            +    K+GEG +G V+K +     + VA+KR+        ++           EI L+ 
Sbjct: 3   KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVR------LDDDDEGVPSSALREICLLK 56

Query: 527 KLQHRNLVRLLGCCIELEEKI-LIYEYMPN--KSLDFFLFDSTKENLLGWGTRVR-IIEG 582
           +L+H+N+VRL       ++K+ L++E+     K      FDS   +L      V+  +  
Sbjct: 57  ELKHKNIVRLHDVLHS-DKKLTLVFEFCDQDLKK----YFDSCNGDLD--PEIVKSFLFQ 109

Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           + +GL + H      V+HRDLK  N+L++++   K+++FG+AR F G  ++  +  +V T
Sbjct: 110 LLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAF-GIPVRCYSAEVV-T 164

Query: 643 YGYMSPE 649
             Y  P+
Sbjct: 165 LWYRPPD 171

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score =  113 bits (284), Expect = 1e-27
 Identities = 54/185 (29%), Positives = 93/185 (50%), Gaps = 28/185 (15%)

Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKN--------EIKLIAK 527
            +    K+GEG +G VYK +   G+ VA+KR+        +            EI L+ +
Sbjct: 22  KYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIR------LDAEDEGIPSTAIREISLLKE 75

Query: 528 LQHRNLVRLLGCCIELEEKILIYEYMPN--KSLDFFLFDSTKENLLGWGTRVR-IIEGIA 584
           L H N+V L+          L++E+M    K     + D  K  L    ++++  +  + 
Sbjct: 76  LHHPNIVSLIDVIHSERCLTLVFEFMEKDLKK----VLDENKTGLQ--DSQIKIYLYQLL 129

Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG 644
           +G+ + HQ+   R++HRDLK  N+L++ D   K++DFG+AR F G  ++S T  +V T  
Sbjct: 130 RGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAF-GIPVRSYTHEVV-TLW 184

Query: 645 YMSPE 649
           Y +P+
Sbjct: 185 YRAPD 189

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score =  116 bits (292), Expect = 2e-27
 Identities = 58/216 (26%), Positives = 92/216 (42%), Gaps = 44/216 (20%)

Query: 474 TANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRL--SSQSGQGQEEFKNEIKLIAKLQH 530
           +  +    KLG G +G V   R  +   E A+K +  +S S     +   E+ ++  L H
Sbjct: 36  SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDH 95

Query: 531 RNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEG-------- 582
            N+++L     +     L+ E          LFD              II          
Sbjct: 96  PNIMKLYDFFEDKRNYYLVMECYKGGE----LFD-------------EIIHRMKFNEVDA 138

Query: 583 ------IAQGLLYLHQYSRLRVIHRDLKASNILL---DKDMNPKISDFGMARIFGGDELQ 633
                 +  G+ YLH+     ++HRDLK  N+LL   +KD   KI DFG++ +F   +  
Sbjct: 139 AVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK-- 193

Query: 634 SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLL 669
            K K  +GT  Y++PE   +  +  K DV+S GV+L
Sbjct: 194 -KMKERLGTAYYIAPE-VLRKKYDEKCDVWSIGVIL 227

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score =  115 bits (290), Expect = 3e-27
 Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 44/216 (20%)

Query: 474 TANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRL--SSQSGQGQEEFKNEIKLIAKLQH 530
              ++    LG+G FG V K +  +  QE AVK +  +S   +       E++L+ KL H
Sbjct: 21  AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80

Query: 531 RNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEG-------- 582
            N+++L     +     ++ E          LFD              II+         
Sbjct: 81  PNIMKLFEILEDSSSFYIVGELYTGGE----LFD-------------EIIKRKRFSEHDA 123

Query: 583 ------IAQGLLYLHQYSRLRVIHRDLKASNILL---DKDMNPKISDFGMARIFGGDELQ 633
                 +  G+ Y+H+     ++HRDLK  NILL   +KD + KI DFG++  F  +   
Sbjct: 124 ARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT-- 178

Query: 634 SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLL 669
            K K  +GT  Y++PE   +G +  K DV+S GV+L
Sbjct: 179 -KMKDRIGTAYYIAPE-VLRGTYDEKCDVWSAGVIL 212

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score =  112 bits (282), Expect = 3e-27
 Identities = 46/201 (22%), Positives = 85/201 (42%), Gaps = 16/201 (7%)

Query: 474 TANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRN 532
              +     LG G FG V++     + +    K +    G  Q   K EI ++   +HRN
Sbjct: 4   YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVK-VKGTDQVLVKKEISILNIARHRN 62

Query: 533 LVRLLGCCIELEEKILIYEYMPNKSLDFFLFD--STKENLLGWGTRVRIIEGIAQGLLYL 590
           ++ L      +EE ++I+E++    +    F+  +T    L     V  +  + + L +L
Sbjct: 63  ILHLHESFESMEELVMIFEFISGLDI----FERINTSAFELNEREIVSYVHQVCEALQFL 118

Query: 591 HQYSRLRVIHRDLKASNILL--DKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSP 648
           H      + H D++  NI+    +    KI +FG AR     +     + +     Y +P
Sbjct: 119 HS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD---NFRLLFTAPEYYAP 172

Query: 649 EYAQQGLFSIKSDVFSFGVLL 669
           E  Q  + S  +D++S G L+
Sbjct: 173 EVHQHDVVSTATDMWSLGTLV 193

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score =  111 bits (279), Expect = 3e-27
 Identities = 60/216 (27%), Positives = 96/216 (44%), Gaps = 44/216 (20%)

Query: 474 TANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRL--SSQSGQGQEEFKNEIKLIAKLQH 530
              ++    LG+G FG V K +  +  QE AVK +  +S   +       E++L+ KL H
Sbjct: 21  AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80

Query: 531 RNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEG-------- 582
            N+++L     +     ++ E          LFD              II+         
Sbjct: 81  PNIMKLFEILEDSSSFYIVGELYTGGE----LFD-------------EIIKRKRFSEHDA 123

Query: 583 ------IAQGLLYLHQYSRLRVIHRDLKASNILL---DKDMNPKISDFGMARIFGGDELQ 633
                 +  G+ Y+H+     ++HRDLK  NILL   +KD + KI DFG++  F  +   
Sbjct: 124 ARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT-- 178

Query: 634 SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLL 669
            K K  +GT  Y++PE  +   +  K DV+S GV+L
Sbjct: 179 -KMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVIL 212

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score =  111 bits (279), Expect = 4e-27
 Identities = 52/184 (28%), Positives = 90/184 (48%), Gaps = 26/184 (14%)

Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKN--------EIKLIAK 527
            +    K+GEG +G VYK +   G+  A+K++        E+           EI ++ +
Sbjct: 3   KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIR------LEKEDEGIPSTTIREISILKE 56

Query: 528 LQHRNLVRLLGCCIELEEKILIYEYMPN--KSLDFFLFDSTKENLLGWGTRVRIIEGIAQ 585
           L+H N+V+L       +  +L++E++    K L     D  +  L     +   +  +  
Sbjct: 57  LKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKL----LDVCEGGLESVTAK-SFLLQLLN 111

Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
           G+ Y H     RV+HRDLK  N+L++++   KI+DFG+AR F G  ++  T  IV T  Y
Sbjct: 112 GIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEIV-TLWY 166

Query: 646 MSPE 649
            +P+
Sbjct: 167 RAPD 170

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score =  112 bits (282), Expect = 5e-27
 Identities = 57/187 (30%), Positives = 95/187 (50%), Gaps = 28/187 (14%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKN--------EIKLIA 526
            +   + LGEG F  VYK R     Q VA+K++       + E K+        EIKL+ 
Sbjct: 11  RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGH---RSEAKDGINRTALREIKLLQ 67

Query: 527 KLQHRNLVRLLGCCIELEEKI-LIYEYMPN--KSLDFFLFDSTKENLLGWGTRVR-IIEG 582
           +L H N++ LL      +  I L++++M    +     +       L    + ++  +  
Sbjct: 68  ELSHPNIIGLLDAFGH-KSNISLVFDFMETDLEV----IIKDNSLVLT--PSHIKAYMLM 120

Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
             QGL YLHQ+    ++HRDLK +N+LLD++   K++DFG+A+ F G   ++ T ++V T
Sbjct: 121 TLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSF-GSPNRAYTHQVV-T 175

Query: 643 YGYMSPE 649
             Y +PE
Sbjct: 176 RWYRAPE 182

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score =  114 bits (287), Expect = 6e-27
 Identities = 61/217 (28%), Positives = 97/217 (44%), Gaps = 45/217 (20%)

Query: 474 TANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLS---SQSGQGQEEFKNEIKLIAKLQ 529
           +  +  +  LG+G FG V   +  + GQE AVK +S    +    +E    E++L+ +L 
Sbjct: 25  SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84

Query: 530 HRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEG------- 582
           H N+++L     +     L+ E      L    FD              II         
Sbjct: 85  HPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FD-------------EIISRKRFSEVD 127

Query: 583 -------IAQGLLYLHQYSRLRVIHRDLKASNILL---DKDMNPKISDFGMARIFGGDEL 632
                  +  G+ Y+H+    +++HRDLK  N+LL    KD N +I DFG++  F   + 
Sbjct: 128 AARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK- 183

Query: 633 QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLL 669
             K K  +GT  Y++PE    G +  K DV+S GV+L
Sbjct: 184 --KMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVIL 217

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score =  109 bits (276), Expect = 7e-27
 Identities = 50/214 (23%), Positives = 84/214 (39%), Gaps = 42/214 (19%)

Query: 474 TANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRN 532
              ++ EN +G G +G V            A K++     +  + FK EI+++  L H N
Sbjct: 8   NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPN 67

Query: 533 LVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEG---------- 582
           ++RL     +  +  L+ E          LF+             R++            
Sbjct: 68  IIRLYETFEDNTDIYLVMELCTGGE----LFE-------------RVVHKRVFRESDAAR 110

Query: 583 ----IAQGLLYLHQYSRLRVIHRDLKASNILL---DKDMNPKISDFGMARIFGGDELQSK 635
               +   + Y H+   L V HRDLK  N L      D   K+ DFG+A  F   +    
Sbjct: 111 IMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK---M 164

Query: 636 TKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLL 669
            +  VGT  Y+SP+  +   +  + D +S GV++
Sbjct: 165 MRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMM 197

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score =  111 bits (280), Expect = 8e-27
 Identities = 32/220 (14%), Positives = 66/220 (30%), Gaps = 22/220 (10%)

Query: 476 NFSTENKLGEGGFGPVYKGR------LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQ 529
                + LGEG F  VY+          N Q+  +K     +          ++ +    
Sbjct: 66  LVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSM 125

Query: 530 HRNLVRLLGCCIELEEKILIYEYMPNKSLDFFL--FDSTKENLLGWGTRVRIIEGIAQGL 587
               ++     +     +L+ E     +L   +  + +T E ++  G  +     +   +
Sbjct: 126 QHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMI 185

Query: 588 LYLHQYSRLRVIHRDLKASNILL-----------DKDMNPKISDFGMARIFGGDELQSKT 636
             +H      +IH D+K  N +L           D      + D G +         +  
Sbjct: 186 EQVHD---CEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIF 242

Query: 637 KRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
                T G+   E      ++ + D F     +   L   
Sbjct: 243 TAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGT 282

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score =  112 bits (280), Expect = 9e-27
 Identities = 31/237 (13%), Positives = 73/237 (30%), Gaps = 54/237 (22%)

Query: 483 LGEGGFGPVYKGR-LLNGQEVAVKRLSS---QSGQGQEEFKNEIKLIAKLQ--------- 529
           LG+       +      G+   V              ++ K E+  +  L+         
Sbjct: 81  LGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAK 140

Query: 530 ----------------HRNLVRLLGCC--IELEEKILIYEYMPNKSLDFF--LFDSTKEN 569
                            + ++R+      + +  +  +Y  M +    F   L   +  +
Sbjct: 141 VHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTH 200

Query: 570 -LLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG 628
             L    R+++   + + L  LH Y    ++H  L+  +I+LD+     ++ F      G
Sbjct: 201 KSLVHHARLQLTLQVIRLLASLHHY---GLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDG 257

Query: 629 GDELQSKTKRIVGTYGYMSPEY-----------AQQGLFSIKSDVFSFGVLLLETLS 674
                        + G+  PE             ++ L +   D ++ G+++     
Sbjct: 258 ------ARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWC 308

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score =  111 bits (280), Expect = 1e-26
 Identities = 54/208 (25%), Positives = 90/208 (43%), Gaps = 22/208 (10%)

Query: 474 TANFSTENKLGEGGFGPVYKGR-LLNGQEVAVK------RLSSQSGQGQEEFKNEIKLIA 526
              +    +LG G F  V K R    G E A K        +S+ G  +EE + E+ ++ 
Sbjct: 11  EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILR 70

Query: 527 KLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDS-TKENLLGWGTRVRIIEGIAQ 585
           ++ H N++ L        + +LI E +        LFD   ++  L        I+ I  
Sbjct: 71  QVLHPNIITLHDVYENRTDVVLILELVSGGE----LFDFLAQKESLSEEEATSFIKQILD 126

Query: 586 GLLYLHQYSRLRVIHRDLKASNILL----DKDMNPKISDFGMARIFGGDELQSKTKRIVG 641
           G+ YLH     ++ H DLK  NI+L        + K+ DFG+A          + K I G
Sbjct: 127 GVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV---EFKNIFG 180

Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLL 669
           T  +++PE        +++D++S GV+ 
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVIT 208

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score =  109 bits (275), Expect = 1e-26
 Identities = 55/221 (24%), Positives = 90/221 (40%), Gaps = 48/221 (21%)

Query: 474 TANFSTENKLGEGGFGPVYKGR-LLNGQEVAVK------RLSSQSGQGQEEFKNEIKLIA 526
             ++    +LG G F  V K R    G+E A K        SS+ G  +EE + E+ ++ 
Sbjct: 4   EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR 63

Query: 527 KLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEG---- 582
           +++H N++ L        + +LI E +        LFD              + E     
Sbjct: 64  EIRHPNIITLHDIFENKTDVVLILELVSGGE----LFD-------------FLAEKESLT 106

Query: 583 ----------IAQGLLYLHQYSRLRVIHRDLKASNILL----DKDMNPKISDFGMARIFG 628
                     I  G+ YLH     R+ H DLK  NI+L      +   K+ DFG+A    
Sbjct: 107 EDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE 163

Query: 629 GDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLL 669
                 + K I GT  +++PE        +++D++S GV+ 
Sbjct: 164 AGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 201

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score =  110 bits (276), Expect = 2e-26
 Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 22/208 (10%)

Query: 474 TANFSTENKLGEGGFGPVYKGR-LLNGQEVAVK------RLSSQSGQGQEEFKNEIKLIA 526
              +    +LG G F  V K R    G E A K        +S+ G  +EE + E+ ++ 
Sbjct: 11  EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70

Query: 527 KLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDS-TKENLLGWGTRVRIIEGIAQ 585
           ++ H N++ L        + +LI E +        LFD   ++  L        I+ I  
Sbjct: 71  QVLHHNVITLHDVYENRTDVVLILELVSGGE----LFDFLAQKESLSEEEATSFIKQILD 126

Query: 586 GLLYLHQYSRLRVIHRDLKASNILL-DKDMNP---KISDFGMARIFGGDELQSKTKRIVG 641
           G+ YLH     ++ H DLK  NI+L DK++     K+ DFG+A          + K I G
Sbjct: 127 GVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV---EFKNIFG 180

Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLL 669
           T  +++PE        +++D++S GV+ 
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVIT 208

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score =  110 bits (276), Expect = 2e-26
 Identities = 51/184 (27%), Positives = 82/184 (44%), Gaps = 25/184 (13%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKN----EIKLIAKL 528
            +     +GEG +G V K R    G+ VA+K    S       +  K     EIKL+ +L
Sbjct: 26  KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDD----DKMVKKIAMREIKLLKQL 81

Query: 529 QHRNLVRLLGCCIELEEKILIYEYMPN---KSLDFFLFDSTKENLLGWGTRVRIIEGIAQ 585
           +H NLV LL  C + +   L++E++ +     L+         N L +    + +  I  
Sbjct: 82  RHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLE------LFPNGLDYQVVQKYLFQIIN 135

Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
           G+ + H +    +IHRD+K  NIL+ +    K+ DFG AR       +     +  T  Y
Sbjct: 136 GIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTL-AAPGEVYDDEVA-TRWY 190

Query: 646 MSPE 649
            +PE
Sbjct: 191 RAPE 194

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score =  110 bits (276), Expect = 2e-26
 Identities = 57/221 (25%), Positives = 90/221 (40%), Gaps = 48/221 (21%)

Query: 474 TANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRL------SSQSGQGQEEFKNEIKLIA 526
              + T  +LG G F  V K R    G + A K +      SS+ G  +E+ + E+ ++ 
Sbjct: 10  DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69

Query: 527 KLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEG---- 582
           ++QH N++ L        + ILI E +        LFD              + E     
Sbjct: 70  EIQHPNVITLHEVYENKTDVILILELVAGGE----LFD-------------FLAEKESLT 112

Query: 583 ----------IAQGLLYLHQYSRLRVIHRDLKASNILL----DKDMNPKISDFGMARIFG 628
                     I  G+ YLH    L++ H DLK  NI+L          KI DFG+A    
Sbjct: 113 EEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169

Query: 629 GDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLL 669
                 + K I GT  +++PE        +++D++S GV+ 
Sbjct: 170 FGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 207

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score =  108 bits (273), Expect = 2e-26
 Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 43/216 (19%)

Query: 474 TANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRL--SSQSGQGQEEFKNEIKLIAKLQH 530
           + N+  + +LG+G F  V +      G E A K +     S +  ++ + E ++  KLQH
Sbjct: 5   SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64

Query: 531 RNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEG-------- 582
            N+VRL     E     L+++ +        LF+              I+          
Sbjct: 65  PNIVRLHDSIQEESFHYLVFDLVTGGE----LFE-------------DIVAREFYSEADA 107

Query: 583 ------IAQGLLYLHQYSRLRVIHRDLKASNILL---DKDMNPKISDFGMARIFGGDELQ 633
                 I + + Y H      ++HR+LK  N+LL    K    K++DFG+A      E  
Sbjct: 108 SHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE-- 162

Query: 634 SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLL 669
                  GT GY+SPE  ++  +S   D+++ GV+L
Sbjct: 163 -AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 197

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score =  108 bits (273), Expect = 4e-26
 Identities = 51/214 (23%), Positives = 87/214 (40%), Gaps = 42/214 (19%)

Query: 474 TANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRN 532
              F     LG G F  V+  +  L G+  A+K +           +NEI ++ K++H N
Sbjct: 8   RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHEN 67

Query: 533 LVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEG---------- 582
           +V L           L+ + +    L    FD             RI+E           
Sbjct: 68  IVTLEDIYESTTHYYLVMQLVSGGEL----FD-------------RILERGVYTEKDASL 110

Query: 583 ----IAQGLLYLHQYSRLRVIHRDLKASNILL---DKDMNPKISDFGMARIFGGDELQSK 635
               +   + YLH+     ++HRDLK  N+L    +++    I+DFG++++     + + 
Sbjct: 111 VIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMST- 166

Query: 636 TKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLL 669
                GT GY++PE   Q  +S   D +S GV+ 
Sbjct: 167 ---ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIT 197

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score =  108 bits (271), Expect = 4e-26
 Identities = 57/221 (25%), Positives = 97/221 (43%), Gaps = 45/221 (20%)

Query: 483 LGEGGFGPVYKGR-LLNGQEVAVK-----RLSSQSGQGQEEF------------------ 518
           +G+G +G V       +    A+K     +L  Q+G  +                     
Sbjct: 21  IGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPI 80

Query: 519 ---KNEIKLIAKLQHRNLVRLLGCCIELEEKILIY---EYMPNKSLDFFLFDSTKENLLG 572
                EI ++ KL H N+V+L+   ++   +  +Y   E +    +     +      L 
Sbjct: 81  EQVYQEIAILKKLDHPNVVKLV-EVLDDPNEDHLYMVFELVNQGPV----MEVPTLKPLS 135

Query: 573 WGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF-GGDE 631
                   + + +G+ YLH     ++IHRD+K SN+L+ +D + KI+DFG++  F G D 
Sbjct: 136 EDQARFYFQDLIKGIEYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA 192

Query: 632 LQSKTKRIVGTYGYMSPE--YAQQGLFS-IKSDVFSFGVLL 669
           L S T   VGT  +M+PE     + +FS    DV++ GV L
Sbjct: 193 LLSNT---VGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score =  108 bits (271), Expect = 5e-26
 Identities = 57/244 (23%), Positives = 96/244 (39%), Gaps = 56/244 (22%)

Query: 457 TRDSWFPMFSLASVSAATANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLS------- 508
           TRD+  P     S      N+  +  LG G    V +       +E AVK +        
Sbjct: 1   TRDAALP--GSHSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSF 58

Query: 509 --SQSGQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDS 565
              +  + +E    E+ ++ K+  H N+++L           L+++ M    L    FD 
Sbjct: 59  SAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL----FD- 113

Query: 566 TKENLLGWGTRVRIIEG--------------IAQGLLYLHQYSRLRVIHRDLKASNILLD 611
                        + E               + + +  LH+   L ++HRDLK  NILLD
Sbjct: 114 ------------YLTEKVTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLD 158

Query: 612 KDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPE------YAQQGLFSIKSDVFSF 665
            DMN K++DFG +      E   K + + GT  Y++PE            +  + D++S 
Sbjct: 159 DDMNIKLTDFGFSCQLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWST 215

Query: 666 GVLL 669
           GV++
Sbjct: 216 GVIM 219

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score =  109 bits (273), Expect = 5e-26
 Identities = 51/210 (24%), Positives = 85/210 (40%), Gaps = 30/210 (14%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK-----RLSSQSGQGQEEFKN---EIKLIA 526
            +ST + LG G FG V+        +EV VK     ++         +      EI +++
Sbjct: 25  KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILS 84

Query: 527 KLQHRNLVRLLGCCIELEEKI-LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQ 585
           +++H N++++L    E +    L+ E   +  LD F F      L        I   +  
Sbjct: 85  RVEHANIIKVLDI-FENQGFFQLVMEKHGS-GLDLFAFIDRHPRLDEPLAS-YIFRQLVS 141

Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
            + YL       +IHRD+K  NI++ +D   K+ DFG A      +L        GT  Y
Sbjct: 142 AVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKL---FYTFCGTIEY 195

Query: 646 MSPEYAQQGLFSIKS------DVFSFGVLL 669
            +PE     +           +++S GV L
Sbjct: 196 CAPE-----VLMGNPYRGPELEMWSLGVTL 220

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score =  108 bits (272), Expect = 5e-26
 Identities = 49/180 (27%), Positives = 84/180 (46%), Gaps = 18/180 (10%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKN-----EIKLIAKLQ 529
            +   +KLGEG +  VYKG+  L    VA+K +  +     EE        E+ L+  L+
Sbjct: 3   TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLE----HEEGAPCTAIREVSLLKDLK 58

Query: 530 HRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLY 589
           H N+V L       +   L++EY+     D   +     N++        +  + +GL Y
Sbjct: 59  HANIVTLHDIIHTEKSLTLVFEYL---DKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAY 115

Query: 590 LHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPE 649
            H+    +V+HRDLK  N+L+++    K++DFG+AR       ++    +V T  Y  P+
Sbjct: 116 CHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAK-SIPTKTYDNEVV-TLWYRPPD 170

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score =  108 bits (272), Expect = 5e-26
 Identities = 50/181 (27%), Positives = 73/181 (40%), Gaps = 19/181 (10%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKN----EIKLIAKL 528
            +    K+GEG +G V+K R    GQ VA+K    S          K     EI+++ +L
Sbjct: 4   KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESED----DPVIKKIALREIRMLKQL 59

Query: 529 QHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLL 588
           +H NLV LL          L++EY               +  +       I     Q + 
Sbjct: 60  KHPNLVNLLEVFRRKRRLHLVFEYC---DHTVLHELDRYQRGVPEHLVKSITWQTLQAVN 116

Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSP 648
           + H++     IHRD+K  NIL+ K    K+ DFG AR+            +  T  Y SP
Sbjct: 117 FCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLL-TGPSDYYDDEVA-TRWYRSP 171

Query: 649 E 649
           E
Sbjct: 172 E 172

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score =  108 bits (271), Expect = 8e-26
 Identities = 62/200 (31%), Positives = 96/200 (48%), Gaps = 31/200 (15%)

Query: 483 LGEGGFGPVYKGR-LLNGQEVAVKRL--SSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGC 539
           +G+G F  V   R +L G+EVA+K +  +  +    ++   E++++  L H N+V+L   
Sbjct: 23  IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82

Query: 540 CIELEEKI-LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEG--------IAQGLLYL 590
            IE E+ + LI EY     +    FD    +    G   R+ E         I   + Y 
Sbjct: 83  -IETEKTLYLIMEYASGGEV----FDYLVAH----G---RMKEKEARSKFRQIVSAVQYC 130

Query: 591 HQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPE- 649
           H   + R++HRDLKA N+LLD DMN KI+DFG +  F             G   Y +PE 
Sbjct: 131 H---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK---LDAFCGAPPYAAPEL 184

Query: 650 YAQQGLFSIKSDVFSFGVLL 669
           +  +     + DV+S GV+L
Sbjct: 185 FQGKKYDGPEVDVWSLGVIL 204

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score =  108 bits (271), Expect = 8e-26
 Identities = 54/198 (27%), Positives = 88/198 (44%), Gaps = 20/198 (10%)

Query: 482 KLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHR-NLVRLL 537
           +LG G F  V +      GQE A K  +   +    + E  +EI ++   +    ++ L 
Sbjct: 36  ELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLH 95

Query: 538 GCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTR---VRIIEGIAQGLLYLHQYS 594
                  E ILI EY     +    F      L    +    +R+I+ I +G+ YLHQ  
Sbjct: 96  EVYENTSEIILILEYAAGGEI----FSLCLPELAEMVSENDVIRLIKQILEGVYYLHQ-- 149

Query: 595 RLRVIHRDLKASNILL---DKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYA 651
              ++H DLK  NILL       + KI DFGM+R  G      + + I+GT  Y++PE  
Sbjct: 150 -NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC---ELREIMGTPEYLAPEIL 205

Query: 652 QQGLFSIKSDVFSFGVLL 669
                +  +D+++ G++ 
Sbjct: 206 NYDPITTATDMWNIGIIA 223

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score =  108 bits (271), Expect = 9e-26
 Identities = 52/269 (19%), Positives = 89/269 (33%), Gaps = 55/269 (20%)

Query: 450 NKAANSRTRDSWFPMFSLASVSAATANFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--- 505
           +   +S   + +F   SL  +      +  +  +G+G +G V            A+K   
Sbjct: 4   HHHHSSGRENLYFQGGSLLEL---QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMN 60

Query: 506 --RLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCC---------------IELEEKIL 548
             ++   + +  E  K E++L+ KL H N+ RL                     L +K+ 
Sbjct: 61  KNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLN 120

Query: 549 IYEYMPNKSLDFFLFDSTKENLLGWGTRV----------------------RIIEGIAQG 586
           ++           +  +                                   I+  I   
Sbjct: 121 VFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180

Query: 587 LLYLHQYSRLRVIHRDLKASNILL--DKDMNPKISDFGMARIFGGDEL--QSKTKRIVGT 642
           L YLH      + HRD+K  N L   +K    K+ DFG+++ F               GT
Sbjct: 181 LHYLHN---QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGT 237

Query: 643 YGYMSPEYAQQGLFSI--KSDVFSFGVLL 669
             +++PE       S   K D +S GVLL
Sbjct: 238 PYFVAPEVLNTTNESYGPKCDAWSAGVLL 266

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score =  108 bits (272), Expect = 9e-26
 Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 43/216 (19%)

Query: 474 TANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRL--SSQSGQGQEEFKNEIKLIAKLQH 530
           + N+  + +LG+G F  V +      G E A K +     S +  ++ + E ++  KLQH
Sbjct: 28  SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87

Query: 531 RNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEG-------- 582
            N+VRL     E     L+++ +        LF+              I+          
Sbjct: 88  PNIVRLHDSIQEESFHYLVFDLVTGGE----LFE-------------DIVAREFYSEADA 130

Query: 583 ------IAQGLLYLHQYSRLRVIHRDLKASNILL---DKDMNPKISDFGMARIFGGDELQ 633
                 I + + Y H      ++HR+LK  N+LL    K    K++DFG+A      E  
Sbjct: 131 SHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE-- 185

Query: 634 SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLL 669
                  GT GY+SPE  ++  +S   D+++ GV+L
Sbjct: 186 -AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 220

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score =  110 bits (277), Expect = 1e-25
 Identities = 58/227 (25%), Positives = 94/227 (41%), Gaps = 55/227 (24%)

Query: 474 TANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLS-------------SQSGQGQEEFK 519
             ++    KLG G +G V   +      E A+K +                  +  EE  
Sbjct: 35  GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIY 94

Query: 520 NEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRI 579
           NEI L+  L H N+++L     + +   L+ E+         LF+             +I
Sbjct: 95  NEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGE----LFE-------------QI 137

Query: 580 IEG--------------IAQGLLYLHQYSRLRVIHRDLKASNILL---DKDMNPKISDFG 622
           I                I  G+ YLH+     ++HRD+K  NILL   +  +N KI DFG
Sbjct: 138 INRHKFDECDAANIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFG 194

Query: 623 MARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLL 669
           ++  F  D    K +  +GT  Y++PE   +  ++ K DV+S GV++
Sbjct: 195 LSSFFSKDY---KLRDRLGTAYYIAPE-VLKKKYNEKCDVWSCGVIM 237

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score =  106 bits (266), Expect = 1e-25
 Identities = 59/199 (29%), Positives = 92/199 (46%), Gaps = 27/199 (13%)

Query: 483 LGEGGFGPVYKGR-LLNGQEVAVKRLS-SQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCC 540
           LGEG +G V      +  + VAVK +   ++    E  K EI +   L H N+V+  G  
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 73

Query: 541 IELEEKI-LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQ--------GLLYLH 591
                   L  EY     L    FD  +         + + E  AQ        G++YLH
Sbjct: 74  RREGNIQYLFLEYCSGGEL----FDRIEP-------DIGMPEPDAQRFFHQLMAGVVYLH 122

Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPE-Y 650
               + + HRD+K  N+LLD+  N KISDFG+A +F  +  +    ++ GT  Y++PE  
Sbjct: 123 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179

Query: 651 AQQGLFSIKSDVFSFGVLL 669
            ++   +   DV+S G++L
Sbjct: 180 KRREFHAEPVDVWSCGIVL 198

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score =  106 bits (268), Expect = 2e-25
 Identities = 51/225 (22%), Positives = 90/225 (40%), Gaps = 53/225 (23%)

Query: 474 TANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLS--------SQSGQGQEEFKNEIKL 524
              +     LG G  G V         ++VA+K +S        ++        + EI++
Sbjct: 9   RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEI 68

Query: 525 IAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEG-- 582
           + KL H  ++++     + E+  ++ E M    L    FD             +++    
Sbjct: 69  LKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL----FD-------------KVVGNKR 110

Query: 583 ------------IAQGLLYLHQYSRLRVIHRDLKASNILL---DKDMNPKISDFGMARIF 627
                       +   + YLH      +IHRDLK  N+LL   ++D   KI+DFG ++I 
Sbjct: 111 LKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167

Query: 628 GGDELQSKTKRIVGTYGYMSPE---YAQQGLFSIKSDVFSFGVLL 669
           G   L    + + GT  Y++PE         ++   D +S GV+L
Sbjct: 168 GETSL---MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score =  106 bits (266), Expect = 3e-25
 Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 25/170 (14%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKN----EIKLIAKL 528
            +    ++G G +G VYK R   +G  VA+K  R+ +  G G          E+ L+ +L
Sbjct: 10  RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGG-GGGGLPISTVREVALLRRL 68

Query: 529 Q---HRNLVRLL----GCCIELEEKI-LIYEYMPN--KSLDFFLFDSTKENLLGWGTRVR 578
           +   H N+VRL+        + E K+ L++E++    ++      D      L   T   
Sbjct: 69  EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTY----LDKAPPPGLPAETIKD 124

Query: 579 IIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG 628
           ++    +GL +LH      ++HRDLK  NIL+      K++DFG+ARI+ 
Sbjct: 125 LMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLARIYS 171

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score =  106 bits (267), Expect = 4e-25
 Identities = 48/229 (20%), Positives = 89/229 (38%), Gaps = 59/229 (25%)

Query: 474 TANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLS--------SQSGQGQEEFKNEIKL 524
              +  ++ +G G    V +      G E AVK +          Q  + +E  + E  +
Sbjct: 93  YQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHI 152

Query: 525 IAKL-QHRNLVRLLGCCIELEEKILIY---EYMPNKSLDFFLFDSTKENLLGWGTRVRII 580
           + ++  H +++ L+      E    ++   + M    L    FD              + 
Sbjct: 153 LRQVAGHPHIITLIDSY---ESSSFMFLVFDLMRKGEL----FD-------------YLT 192

Query: 581 EG--------------IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARI 626
           E               + + + +LH      ++HRDLK  NILLD +M  ++SDFG +  
Sbjct: 193 EKVALSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPENILLDDNMQIRLSDFGFSCH 249

Query: 627 FGGDELQSKTKRIVGTYGYMSPE------YAQQGLFSIKSDVFSFGVLL 669
               E   K + + GT GY++PE            +  + D+++ GV+L
Sbjct: 250 LEPGE---KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVIL 295

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score =  106 bits (266), Expect = 4e-25
 Identities = 54/188 (28%), Positives = 81/188 (43%), Gaps = 29/188 (15%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKN--------EIKLIA 526
            +    KLGEG +G VYK    +  + VA+KR+        E  +         E+ L+ 
Sbjct: 35  RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIR------LEHEEEGVPGTAIREVSLLK 88

Query: 527 KLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQG 586
           +LQHRN++ L           LI+EY     L  ++ D   +  +        +  +  G
Sbjct: 89  ELQHRNIIELKSVIHHNHRLHLIFEYA-ENDLKKYM-DKNPD--VSMRVIKSFLYQLING 144

Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNP-----KISDFGMARIFGGDELQSKTKRIVG 641
           + + H     R +HRDLK  N+LL           KI DFG+AR F G  ++  T  I+ 
Sbjct: 145 VNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF-GIPIRQFTHEII- 199

Query: 642 TYGYMSPE 649
           T  Y  PE
Sbjct: 200 TLWYRPPE 207

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score =  107 bits (270), Expect = 6e-25
 Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 44/225 (19%)

Query: 467 LASVSAA--TANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRL--SSQSGQGQEEFKNE 521
           +A+++    T  +    +LG+G F  V +   +L GQE A   +     S +  ++ + E
Sbjct: 1   MATITCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLERE 60

Query: 522 IKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIE 581
            ++   L+H N+VRL     E     LI++ +        LF+              I+ 
Sbjct: 61  ARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGE----LFE-------------DIVA 103

Query: 582 G--------------IAQGLLYLHQYSRLRVIHRDLKASNILL---DKDMNPKISDFGMA 624
                          I + +L+ HQ   + V+HR+LK  N+LL    K    K++DFG+A
Sbjct: 104 REYYSEADASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLA 160

Query: 625 RIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLL 669
               G+  Q       GT GY+SPE  ++  +    D+++ GV+L
Sbjct: 161 IEVEGE--QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVIL 203

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score =  107 bits (269), Expect = 6e-25
 Identities = 50/217 (23%), Positives = 90/217 (41%), Gaps = 53/217 (24%)

Query: 482 KLGEGGFGPVYKGR-LLNGQEVAVKRLS--------SQSGQGQEEFKNEIKLIAKLQHRN 532
            LG G  G V         ++VA++ +S        ++        + EI+++ KL H  
Sbjct: 142 TLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 201

Query: 533 LVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEG---------- 582
           ++++     + E+  ++ E M    L    FD             +++            
Sbjct: 202 IIKIKNF-FDAEDYYIVLELMEGGEL----FD-------------KVVGNKRLKEATCKL 243

Query: 583 ----IAQGLLYLHQYSRLRVIHRDLKASNILL---DKDMNPKISDFGMARIFGGDELQSK 635
               +   + YLH+     +IHRDLK  N+LL   ++D   KI+DFG ++I G   L   
Sbjct: 244 YFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL--- 297

Query: 636 TKRIVGTYGYMSPE---YAQQGLFSIKSDVFSFGVLL 669
            + + GT  Y++PE         ++   D +S GV+L
Sbjct: 298 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 334

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score =  105 bits (263), Expect = 7e-25
 Identities = 54/214 (25%), Positives = 82/214 (38%), Gaps = 38/214 (17%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRL------SSQSGQGQEEFKNEIKLIAKL 528
            +     LG GGFG VY G  + +   VA+K +                   E+ L+ K+
Sbjct: 44  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 103

Query: 529 QHR--NLVRLLGCCIELEEKI-LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEG--- 582
                 ++RLL    E  +   LI E  P    D  LFD   E       R  + E    
Sbjct: 104 SSGFSGVIRLLDW-FERPDSFVLILER-PEPVQD--LFDFITE-------RGALQEELAR 152

Query: 583 -----IAQGLLYLHQYSRLRVIHRDLKASNILLDKD-MNPKISDFGMARIFGGDELQSKT 636
                + + + + H      V+HRD+K  NIL+D +    K+ DFG   +          
Sbjct: 153 SFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---- 205

Query: 637 KRIVGTYGYMSPEYAQQGLFS-IKSDVFSFGVLL 669
               GT  Y  PE+ +   +    + V+S G+LL
Sbjct: 206 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL 239

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score =  104 bits (262), Expect = 1e-24
 Identities = 59/199 (29%), Positives = 92/199 (46%), Gaps = 27/199 (13%)

Query: 483 LGEGGFGPVYKGR-LLNGQEVAVKRLS-SQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCC 540
           LGEG +G V      +  + VAVK +   ++    E  K EI +   L H N+V+  G  
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 73

Query: 541 IELEEKI-LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQ--------GLLYLH 591
                   L  EY     L    FD  +         + + E  AQ        G++YLH
Sbjct: 74  RREGNIQYLFLEYCSGGEL----FDRIEP-------DIGMPEPDAQRFFHQLMAGVVYLH 122

Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPE-Y 650
               + + HRD+K  N+LLD+  N KISDFG+A +F  +  +    ++ GT  Y++PE  
Sbjct: 123 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179

Query: 651 AQQGLFSIKSDVFSFGVLL 669
            ++   +   DV+S G++L
Sbjct: 180 KRREFHAEPVDVWSCGIVL 198

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score =  104 bits (261), Expect = 1e-24
 Identities = 55/216 (25%), Positives = 88/216 (40%), Gaps = 40/216 (18%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRL------SSQSGQGQEEFKNEIKLIAKL 528
            +     LG+GGFG V+ G  L +  +VA+K +                   E+ L+ K+
Sbjct: 32  EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKV 91

Query: 529 ----QHRNLVRLLGCCIELEEKI-LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEG- 582
                H  ++RLL    E +E   L+ E  P  + D  LFD   E       +  + EG 
Sbjct: 92  GAGGGHPGVIRLLDW-FETQEGFMLVLER-PLPAQD--LFDYITE-------KGPLGEGP 140

Query: 583 -------IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNP-KISDFGMARIFGGDELQS 634
                  +   + + H      V+HRD+K  NIL+D      K+ DFG   +   +    
Sbjct: 141 SRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPY-- 195

Query: 635 KTKRIVGTYGYMSPEYAQQGLFS-IKSDVFSFGVLL 669
                 GT  Y  PE+  +  +  + + V+S G+LL
Sbjct: 196 --TDFDGTRVYSPPEWISRHQYHALPATVWSLGILL 229

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score =  102 bits (257), Expect = 3e-24
 Identities = 61/199 (30%), Positives = 93/199 (46%), Gaps = 28/199 (14%)

Query: 483 LGEGGFGPVYKGR-LLNGQEVAVK---RLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLG 538
           LG G FG V  G   L G +VAVK   R   +S     + K EI+ +   +H ++++L  
Sbjct: 19  LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78

Query: 539 CCIELEEKI-LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEG------IAQGLLYLH 591
             I       ++ EY+    L    FD   ++      RV  +E       I   + Y H
Sbjct: 79  V-ISTPTDFFMVMEYVSGGEL----FDYICKH-----GRVEEMEARRLFQQILSAVDYCH 128

Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPE-Y 650
              R  V+HRDLK  N+LLD  MN KI+DFG++ +    E   +T    G+  Y +PE  
Sbjct: 129 ---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL-RTS--CGSPNYAAPEVI 182

Query: 651 AQQGLFSIKSDVFSFGVLL 669
           + +     + D++S GV+L
Sbjct: 183 SGRLYAGPEVDIWSCGVIL 201

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score =  104 bits (261), Expect = 3e-24
 Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 41/198 (20%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKN----EIKLIAKL 528
            +    K+G+G FG V+K R    GQ+VA+K   + ++    +E F      EIK++  L
Sbjct: 18  KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE----KEGFPITALREIKILQLL 73

Query: 529 QHRNLVRLLGCCIELEEKI--------LIYEYMPN--KSLDFFLFDSTKENLLGWGTRVR 578
           +H N+V L+  C               L++++  +        L  +           + 
Sbjct: 74  KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAG----LLSNVLVKFT-----LS 124

Query: 579 IIEGIAQ----GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG---GDE 631
            I+ + Q    GL Y+H+    +++HRD+KA+N+L+ +D   K++DFG+AR F      +
Sbjct: 125 EIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQ 181

Query: 632 LQSKTKRIVGTYGYMSPE 649
               T R+V T  Y  PE
Sbjct: 182 PNRYTNRVV-TLWYRPPE 198

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score =  103 bits (258), Expect = 4e-24
 Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 33/173 (19%)

Query: 476 NFSTENKLGEGGFGPVYKGR--LLNGQEVAVKRLSSQSGQGQEEFKN--------EIKLI 525
            +    ++GEG +G V+K R     G+ VA+KR+        +  +         E+ ++
Sbjct: 12  QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVR------VQTGEEGMPLSTIREVAVL 65

Query: 526 AKLQ---HRNLVRLL----GCCIELEEKI-LIYEYMPN--KSLDFFLFDSTKENLLGWGT 575
             L+   H N+VRL         + E K+ L++E++     +      D   E  +   T
Sbjct: 66  RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTY----LDKVPEPGVPTET 121

Query: 576 RVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG 628
              ++  + +GL +LH +   RV+HRDLK  NIL+      K++DFG+ARI+ 
Sbjct: 122 IKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS 171

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score =  104 bits (261), Expect = 4e-24
 Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 36/191 (18%)

Query: 482 KLGEGGFGPVYKGR---LLNGQEVAVKRLS----SQSGQGQEEFKNEIKLIAKLQHRNLV 534
           K+G G +G VYK +     + ++ A+K++     S S         EI L+ +L+H N++
Sbjct: 28  KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACR------EIALLRELKHPNVI 81

Query: 535 RLLGCCIE-LEEKI-LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEG--------IA 584
            L    +   + K+ L+++Y      D +               V++  G        I 
Sbjct: 82  SLQKVFLSHADRKVWLLFDYA---EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQIL 138

Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLDKDMNP----KISDFGMARIFG--GDELQSKTKR 638
            G+ YLH      V+HRDLK +NIL+  +       KI+D G AR+F      L      
Sbjct: 139 DGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPV 195

Query: 639 IVGTYGYMSPE 649
           +V T+ Y +PE
Sbjct: 196 VV-TFWYRAPE 205

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score =  102 bits (257), Expect = 5e-24
 Identities = 54/236 (22%), Positives = 89/236 (37%), Gaps = 54/236 (22%)

Query: 468 ASVSAATANFS-----TENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNE 521
            S  + +  F       E+ LGEG    V     L+  QE AVK +  Q G  +     E
Sbjct: 1   GSTDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFRE 60

Query: 522 IKLIAKLQ-HRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRII 580
           ++++ + Q HRN++ L+    E +   L++E M   S+                    I 
Sbjct: 61  VEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSI----LS-------------HIH 103

Query: 581 E--------------GIAQGLLYLHQYSRLRVIHRDLKASNILL---DKDMNPKISDFGM 623
           +               +A  L +LH      + HRDLK  NIL    ++    KI DF +
Sbjct: 104 KRRHFNELEASVVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDL 160

Query: 624 ARIF-----GGDELQSKTKRIVGTYGYMSPE-----YAQQGLFSIKSDVFSFGVLL 669
                           +     G+  YM+PE       +  ++  + D++S GV+L
Sbjct: 161 GSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVIL 216

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score =  103 bits (258), Expect = 1e-23
 Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 18/167 (10%)

Query: 474 TANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKN-EIKLIAKLQHRN 532
              ++    +G G FG V++ +L+   EVA+K++        + FKN E++++  ++H N
Sbjct: 39  EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQ-----DKRFKNRELQIMRIVKHPN 93

Query: 533 LVRLLGCCIELEEKI------LIYEYMPNKSLDFFLFDSTKENLLGWGTRVR-IIEGIAQ 585
           +V L        +K       L+ EY+P +++        K         ++  +  + +
Sbjct: 94  VVDLKAFFYSNGDKKDEVFLNLVLEYVP-ETVYRASRHYAKLKQTMPMLLIKLYMYQLLR 152

Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNP-KISDFGMARIFGGDE 631
            L Y+H    + + HRD+K  N+LLD      K+ DFG A+I    E
Sbjct: 153 SLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE 196

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score =  100 bits (250), Expect = 5e-23
 Identities = 54/194 (27%), Positives = 89/194 (45%), Gaps = 19/194 (9%)

Query: 483 LGEGGFGPVYKGR-LLNGQEVAVK---RLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLG 538
           LGEG FG V         Q+VA+K   R   +        + EI  +  L+H ++++L  
Sbjct: 17  LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76

Query: 539 CCIELEEKI-LIYEYMPNKSLDFFLFD-STKENLLGWGTRVRIIEGIAQGLLYLHQYSRL 596
             I     I ++ EY   +     LFD   ++  +      R  + I   + Y H   R 
Sbjct: 77  V-ITTPTDIVMVIEYAGGE-----LFDYIVEKKRMTEDEGRRFFQQIICAIEYCH---RH 127

Query: 597 RVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPE-YAQQGL 655
           +++HRDLK  N+LLD ++N KI+DFG++ I         +    G+  Y +PE    +  
Sbjct: 128 KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS---CGSPNYAAPEVINGKLY 184

Query: 656 FSIKSDVFSFGVLL 669
              + DV+S G++L
Sbjct: 185 AGPEVDVWSCGIVL 198

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score =  101 bits (254), Expect = 7e-23
 Identities = 63/199 (31%), Positives = 96/199 (48%), Gaps = 28/199 (14%)

Query: 483 LGEGGFGPVYKGR-LLNGQEVAVKRLSSQ---SGQGQEEFKNEIKLIAKLQHRNLVRLLG 538
           LG G FG V  G+  L G +VAVK L+ Q   S     + + EI+ +   +H ++++L  
Sbjct: 24  LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83

Query: 539 CCIELEEKI-LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEG------IAQGLLYLH 591
             I     I ++ EY+    L    FD   +N      R+   E       I  G+ Y H
Sbjct: 84  V-ISTPSDIFMVMEYVSGGEL----FDYICKN-----GRLDEKESRRLFQQILSGVDYCH 133

Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPE-Y 650
              R  V+HRDLK  N+LLD  MN KI+DFG++ +    E   +T    G+  Y +PE  
Sbjct: 134 ---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL-RTS--CGSPNYAAPEVI 187

Query: 651 AQQGLFSIKSDVFSFGVLL 669
           + +     + D++S GV+L
Sbjct: 188 SGRLYAGPEVDIWSSGVIL 206

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 99.8 bits (249), Expect = 2e-22
 Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 19/168 (11%)

Query: 474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKN-EIKLIAKLQHR 531
             +++    +G G FG VY+ +L  +G+ VA+K++        + FKN E++++ KL H 
Sbjct: 53  EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHC 107

Query: 532 NLVRLLGCCIELEEKI------LIYEYMPNKSLDFFLFDSTKENLLGWGTRVR-IIEGIA 584
           N+VRL        EK       L+ +Y+P +++       ++         V+  +  + 
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVP-ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 166

Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLDKDMNP-KISDFGMARIFGGDE 631
           + L Y+H      + HRD+K  N+LLD D    K+ DFG A+     E
Sbjct: 167 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 211

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 97.8 bits (244), Expect = 3e-22
 Identities = 47/209 (22%), Positives = 81/209 (38%), Gaps = 40/209 (19%)

Query: 479 TENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQ-HRNLVRL 536
           ++  LG G  G V +      GQ+ A+K L         + + E+    +     ++V +
Sbjct: 33  SKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-----PKARQEVDHHWQASGGPHIVCI 87

Query: 537 LGCCIELEEKILIYEYMPNKSLDFF----------LFDSTKENLLGWGTR---VRIIEGI 583
           L           +YE M +                LF   +E      T      I+  I
Sbjct: 88  LD----------VYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDI 137

Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILL---DKDMNPKISDFGMARIFGGDELQSKTKRIV 640
              + +LH      + HRD+K  N+L    +KD   K++DFG A+    + LQ+      
Sbjct: 138 GTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQT----PC 190

Query: 641 GTYGYMSPEYAQQGLFSIKSDVFSFGVLL 669
            T  Y++PE      +    D++S GV++
Sbjct: 191 YTPYYVAPEVLGPEKYDKSCDMWSLGVIM 219

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 97.8 bits (244), Expect = 3e-22
 Identities = 53/214 (24%), Positives = 91/214 (42%), Gaps = 43/214 (20%)

Query: 474 TANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRN 532
           +  F  E++LG G    VY+ +     +  A+K L       ++  + EI ++ +L H N
Sbjct: 52  SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKT--VDKKIVRTEIGVLLRLSHPN 109

Query: 533 LVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEG---------- 582
           +++L        E  L+ E +    L    FD             RI+E           
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGEL----FD-------------RIVEKGYYSERDAAD 152

Query: 583 ----IAQGLLYLHQYSRLRVIHRDLKASNILL---DKDMNPKISDFGMARIFGGDELQSK 635
               I + + YLH+     ++HRDLK  N+L      D   KI+DFG+++I         
Sbjct: 153 AVKQILEAVAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV---L 206

Query: 636 TKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLL 669
            K + GT GY +PE  +   +  + D++S G++ 
Sbjct: 207 MKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIIT 240

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 97.0 bits (242), Expect = 6e-22
 Identities = 51/216 (23%), Positives = 84/216 (38%), Gaps = 46/216 (21%)

Query: 474 TANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKL-QHR 531
           T  +  +  +G G +    +        E AVK +        EE    I+++ +  QH 
Sbjct: 21  TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEE----IEILLRYGQHP 76

Query: 532 NLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIE---------- 581
           N++ L     + +   ++ E M    L     D             +I+           
Sbjct: 77  NIITLKDVYDDGKYVYVVTELMKGGEL----LD-------------KILRQKFFSEREAS 119

Query: 582 ----GIAQGLLYLHQYSRLRVIHRDLKASNILL-DKDMNP---KISDFGMARIFGGDELQ 633
                I + + YLH      V+HRDLK SNIL  D+  NP   +I DFG A+    +   
Sbjct: 120 AVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGL 176

Query: 634 SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLL 669
             T     T  +++PE  ++  +    D++S GVLL
Sbjct: 177 LMT--PCYTANFVAPEVLERQGYDAACDIWSLGVLL 210

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 96.6 bits (241), Expect = 7e-22
 Identities = 52/211 (24%), Positives = 83/211 (39%), Gaps = 44/211 (20%)

Query: 478 STENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQ-HRNLVR 535
             +  LGEG F    K     + Q  AVK +S +    +   + EI  +   + H N+V+
Sbjct: 14  LKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRM---EANTQKEITALKLCEGHPNIVK 70

Query: 536 LLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIE-------------- 581
           L     +     L+ E +        LF+             RI +              
Sbjct: 71  LHEVFHDQLHTFLVMELLNGGE----LFE-------------RIKKKKHFSETEASYIMR 113

Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILL---DKDMNPKISDFGMARIFGGDELQSKTKR 638
            +   + ++H    + V+HRDLK  N+L    + ++  KI DFG AR+   D    KT  
Sbjct: 114 KLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKT-- 168

Query: 639 IVGTYGYMSPEYAQQGLFSIKSDVFSFGVLL 669
              T  Y +PE   Q  +    D++S GV+L
Sbjct: 169 PCFTLHYAAPELLNQNGYDESCDLWSLGVIL 199

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 95.8 bits (239), Expect = 9e-22
 Identities = 61/202 (30%), Positives = 98/202 (48%), Gaps = 22/202 (10%)

Query: 483 LGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEF-KNEIKLIAKLQHRNLVRLLG 538
           LGEG F  V   R L   +E A+K L  +    + +  +   E  ++++L H   V+L  
Sbjct: 38  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97

Query: 539 CCIELEEKI-LIYEYMPNKSLDFFL-----FDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
              + +EK+     Y  N  L  ++     FD T        TR    E I   L YLH 
Sbjct: 98  TF-QDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-------TRFYTAE-IVSALEYLHG 148

Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ 652
                +IHRDLK  NILL++DM+ +I+DFG A++   +  Q++    VGT  Y+SPE   
Sbjct: 149 ---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 205

Query: 653 QGLFSIKSDVFSFGVLLLETLS 674
           +      SD+++ G ++ + ++
Sbjct: 206 EKSACKSSDLWALGCIIYQLVA 227

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 98.7 bits (246), Expect = 1e-21
 Identities = 60/197 (30%), Positives = 97/197 (49%), Gaps = 12/197 (6%)

Query: 483 LGEGGFGPVYKGRLLNGQEV-AVKRLSSQ---SGQGQEEFKNEIKLIAKLQHRNLVRLLG 538
           LG GGFG V+  ++    ++ A K+L+ +     +G +    E K++AK+  R +V L  
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA- 251

Query: 539 CCIELEEKI-LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRI-IEGIAQGLLYLHQYSRL 596
              E +  + L+   M    + + +++  ++N      R       I  GL +LHQ    
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---R 308

Query: 597 RVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLF 656
            +I+RDLK  N+LLD D N +ISD G+A      +  +KTK   GT G+M+PE      +
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ--TKTKGYAGTPGFMAPELLLGEEY 366

Query: 657 SIKSDVFSFGVLLLETL 673
               D F+ GV L E +
Sbjct: 367 DFSVDYFALGVTLYEMI 383

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 94.0 bits (234), Expect = 1e-20
 Identities = 55/202 (27%), Positives = 81/202 (40%), Gaps = 36/202 (17%)

Query: 483 LGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCI 541
           +G G FG     R  L  + VAVK +   +    E  + EI     L+H N+VR     I
Sbjct: 28  IGSGNFGVARLMRDKLTKELVAVKYIERGAAI-DENVQREIINHRSLRHPNIVRFKE-VI 85

Query: 542 ELEEKI-LIYEYMPNKSLDFFLFDSTKENLLGWGTRVR----------IIEGIAQGLLYL 590
                + +I EY         L++           R            ++ G++    Y 
Sbjct: 86  LTPTHLAIIMEYASGGE----LYERICNA-----GRFSEDEARFFFQQLLSGVS----YC 132

Query: 591 HQYSRLRVIHRDLKASNILLDKD--MNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSP 648
           H    +++ HRDLK  N LLD       KI DFG ++         K+   VGT  Y++P
Sbjct: 133 H---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP-KST--VGTPAYIAP 186

Query: 649 E-YAQQGLFSIKSDVFSFGVLL 669
           E   +Q      +DV+S GV L
Sbjct: 187 EVLLRQEYDGKIADVWSCGVTL 208

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 95.6 bits (238), Expect = 1e-20
 Identities = 58/196 (29%), Positives = 93/196 (47%), Gaps = 13/196 (6%)

Query: 483 LGEGGFGPVYKGRLLNGQEV-AVKRLSSQ---SGQGQEEFKNEIKLIAKLQHRNLVRLLG 538
           LG+GGFG V   ++    ++ A K+L  +     +G+    NE +++ K+  R +V L  
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL-A 250

Query: 539 CCIELEEKI-LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLR 597
              E ++ + L+   M    L F ++   +             E I  GL  LH   R R
Sbjct: 251 YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAE-ICCGLEDLH---RER 306

Query: 598 VIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFS 657
           +++RDLK  NILLD   + +ISD G+A      +     K  VGT GYM+PE  +   ++
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ---TIKGRVGTVGYMAPEVVKNERYT 363

Query: 658 IKSDVFSFGVLLLETL 673
              D ++ G LL E +
Sbjct: 364 FSPDWWALGCLLYEMI 379

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 92.4 bits (230), Expect = 3e-20
 Identities = 44/189 (23%), Positives = 71/189 (37%), Gaps = 55/189 (29%)

Query: 474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKN----EIKLIAKL 528
              F  E   G+G FG V  G+    G  VA+K++          F+N     ++ +A L
Sbjct: 22  MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-----RFRNRELQIMQDLAVL 76

Query: 529 QHRNLVRLLGCCIELEEK-------ILIYEYMP-------------NKSLD-----FFLF 563
            H N+V+L      L E+        ++ EY+P               +        FLF
Sbjct: 77  HHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLF 136

Query: 564 DSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNP-KISDFG 622
                              + + +  LH  S + V HRD+K  N+L+++     K+ DFG
Sbjct: 137 Q------------------LIRSIGCLHLPS-VNVCHRDIKPHNVLVNEADGTLKLCDFG 177

Query: 623 MARIFGGDE 631
            A+     E
Sbjct: 178 SAKKLSPSE 186

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 92.9 bits (231), Expect = 3e-20
 Identities = 41/216 (18%), Positives = 77/216 (35%), Gaps = 53/216 (24%)

Query: 479 TENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQ-HRNLVRL 536
           T   LG G  G V +       ++ A+K L         + + E++L  +     ++VR+
Sbjct: 66  TSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRI 120

Query: 537 LGCC---IELEEKI-LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEG---------- 582
           +          + + ++ E +    L    F              RI +           
Sbjct: 121 VDVYENLYAGRKCLLIVMECLDGGEL----FS-------------RIQDRGDQAFTEREA 163

Query: 583 ------IAQGLLYLHQYSRLRVIHRDLKASNILL---DKDMNPKISDFGMARIFGGDELQ 633
                 I + + YLH    + + HRD+K  N+L      +   K++DFG A+        
Sbjct: 164 SEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-- 218

Query: 634 SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLL 669
                   T  Y++PE      +    D++S GV++
Sbjct: 219 -SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 253

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 93.8 bits (233), Expect = 6e-20
 Identities = 62/203 (30%), Positives = 94/203 (46%), Gaps = 26/203 (12%)

Query: 483 LGEGGFGPVYKGRLLNGQEV-AVKRLSSQ---SGQGQEEFKNE---IKLIAKLQHRNLVR 535
           +G GGFG VY  R  +  ++ A+K L  +     QG+    NE   + L++      +V 
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256

Query: 536 LLGCCIELEEKI-LIYEYMPNKSLDFFLFDSTK--ENLLGWGTRVRI-IEGIAQGLLYLH 591
           +        +K+  I + M    L + L       E        +R     I  GL ++H
Sbjct: 257 M-SYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA------DMRFYAAEIILGLEHMH 309

Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYA 651
                 V++RDLK +NILLD+  + +ISD G+A  F       K    VGT+GYM+PE  
Sbjct: 310 N---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK----KPHASVGTHGYMAPEVL 362

Query: 652 QQGLFSIKS-DVFSFGVLLLETL 673
           Q+G+    S D FS G +L + L
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLL 385

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 88.1 bits (218), Expect = 8e-19
 Identities = 45/137 (32%), Positives = 69/137 (50%), Gaps = 11/137 (8%)

Query: 539 CCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRV 598
               +EEK L          D +    T E+L+ +  +      +A+G+ +L   +  + 
Sbjct: 164 SSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQ------VAKGMEFL---ASRKC 214

Query: 599 IHRDLKASNILLDKDMNPKISDFGMAR-IFGGDELQSKTKRIVGTYGYMSPEYAQQGLFS 657
           IHRDL A NILL +    KI DFG+AR I+   +   K    +    +M+PE     +++
Sbjct: 215 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL-PLKWMAPETIFDRVYT 273

Query: 658 IKSDVFSFGVLLLETLS 674
           I+SDV+SFGVLL E  S
Sbjct: 274 IQSDVWSFGVLLWEIFS 290

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 63.4 bits (154), Expect = 9e-11
 Identities = 32/159 (20%), Positives = 54/159 (33%), Gaps = 19/159 (11%)

Query: 476 NFSTENKLGEGGFGPVYKGRLLN------GQEVAVKRLSSQSGQG-QEEFKNEIKLIAKL 528
                  LG G FG V +            + VAVK L   +         +E+K++  +
Sbjct: 23  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 82

Query: 529 -QHRNLVRLLGCCIELEEKI-LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQG 586
             H N+V LLG C +    + +I E+    +L  +L             R   +    +G
Sbjct: 83  GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL----------RSKRNEFVPYKTKG 132

Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR 625
             +      +  I  DLK     +    +   S F   +
Sbjct: 133 ARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 86.3 bits (214), Expect = 9e-19
 Identities = 33/286 (11%), Positives = 75/286 (26%), Gaps = 53/286 (18%)

Query: 482 KLGEGGFGPVYKGR--LLNGQEVAVKRLSSQSG---QGQEEFKNEIKLIAKLQHRNLVRL 536
             G       ++     L  ++VA+  +  Q        +E  +    ++++    + R+
Sbjct: 38  FHGGVPPLQFWQALDTAL-DRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARV 96

Query: 537 LGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRL 596
           L         +++ E++   SL         +        +R ++ +A      H   R 
Sbjct: 97  LDVVHTRAGGLVVAEWIRGGSLQEVA-----DTSPSPVGAIRAMQSLAAAADAAH---RA 148

Query: 597 RVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLF 656
            V       S + +  D +  ++                          M          
Sbjct: 149 GVALSIDHPSRVRVSIDGDVVLAYPA----------------------TMPDA------- 179

Query: 657 SIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASY 716
           + + D+   G  L   L ++            L     D          ID  +  + S 
Sbjct: 180 NPQDDIRGIGASLYALLVNRWPLP-EAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISA 238

Query: 717 LILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPRQPAF 762
           +            VQ D   R     +++++   T           
Sbjct: 239 VAAR--------SVQGDGGIRSAS-TLLNLMQQATAVADRTEVLGP 275

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 87.6 bits (217), Expect = 3e-18
 Identities = 44/209 (21%), Positives = 80/209 (38%), Gaps = 57/209 (27%)

Query: 474 TANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKN---------EIK 523
              +   + +G G +G V +    L  + VA+K++          F++         EI 
Sbjct: 52  PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKIL-------RVFEDLIDCKRILREIA 104

Query: 524 LIAKLQHRNLVRLLGCCI-----ELEEKILIYEYMP---------NKSLD-----FFLFD 564
           ++ +L H ++V++L   I     + +E  ++ E               L        L+ 
Sbjct: 105 ILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLY- 163

Query: 565 STKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMA 624
               NLL              G+ Y+H  S   ++HRDLK +N L+++D + K+ DFG+A
Sbjct: 164 ----NLL-------------VGVKYVH--SA-GILHRDLKPANCLVNQDCSVKVCDFGLA 203

Query: 625 RIFGGDELQSKTKRIVGTYGYMSPEYAQQ 653
           R     E  +    I      M+      
Sbjct: 204 RTVDYPENGNSQLPISPREDDMNLVTFPH 232

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 81.9 bits (203), Expect = 6e-17
 Identities = 48/213 (22%), Positives = 93/213 (43%), Gaps = 27/213 (12%)

Query: 474 TANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQ-HR 531
             ++    KLG G +  V++   + N ++V VK L       +++ K EIK++  L+   
Sbjct: 35  QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGP 91

Query: 532 NLVRLLGCCIELEEK--ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVR-IIEGIAQGLL 588
           N++ L     +   +   L++E++ N          T  +       +R  +  I + L 
Sbjct: 92  NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD-------IRFYMYEILKALD 144

Query: 589 YLHQYSRLRVIHRDLKASNILLD-KDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
           Y H  S   ++HRD+K  N+++D +    ++ D+G+A        Q    R+   Y +  
Sbjct: 145 YCH--SM-GIMHRDVKPHNVMIDHEHRKLRLIDWGLAE--FYHPGQEYNVRVASRY-FKG 198

Query: 648 PE---YAQQGLFSIKSDVFSFGVLLLETLSSKR 677
           PE     Q   +S+  D++S G +L   +  K 
Sbjct: 199 PELLVDYQMYDYSL--DMWSLGCMLASMIFRKE 229

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 80.5 bits (199), Expect = 3e-16
 Identities = 44/247 (17%), Positives = 92/247 (37%), Gaps = 57/247 (23%)

Query: 474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKN-EIKLIAKLQHR 531
           +  +S    LG G FG V +   + +G+  A+K++          +KN E+ ++  L H 
Sbjct: 6   SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP-----RYKNRELDIMKVLDHV 60

Query: 532 NLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRV-------------- 577
           N+++L+       ++       P+        ++   N                      
Sbjct: 61  NIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYV 120

Query: 578 -----RIIEG-------------------IAQGLLYLHQYSRLRVIHRDLKASNILLD-K 612
                ++++                    + + + ++H    L + HRD+K  N+L++ K
Sbjct: 121 PDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHS---LGICHRDIKPQNLLVNSK 177

Query: 613 DMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEY---AQQGLFSIKSDVFSFGVLL 669
           D   K+ DFG A+       +     I   + Y +PE    A +  ++   D++S G + 
Sbjct: 178 DNTLKLCDFGSAKKL--IPSEPSVAYICSRF-YRAPELMLGATE--YTPSIDLWSIGCVF 232

Query: 670 LETLSSK 676
            E +  K
Sbjct: 233 GELILGK 239

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 81.0 bits (200), Expect = 3e-16
 Identities = 51/201 (25%), Positives = 89/201 (44%), Gaps = 17/201 (8%)

Query: 483 LGEGGFGPVYKGRLLNGQEV-AVKRLSSQSGQGQEE---FKNEIKLIAKLQHRNLVRLLG 538
           +G G FG V   +L N  +V A+K L+      + E   F+ E  ++     + +  L  
Sbjct: 82  IGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLH- 140

Query: 539 CCIELEEKI-LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLR 597
              + +  + L+ +Y     L   L    ++ L     R  + E +   +  +HQ   L 
Sbjct: 141 YAFQDDNNLYLVMDYYVGGDL-LTLLSKFEDRLPEEMARFYLAE-MVIAIDSVHQ---LH 195

Query: 598 VIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPE-----YAQ 652
            +HRD+K  NIL+D + + +++DFG       D    ++   VGT  Y+SPE        
Sbjct: 196 YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG-TVQSSVAVGTPDYISPEILQAMEGG 254

Query: 653 QGLFSIKSDVFSFGVLLLETL 673
           +G +  + D +S GV + E L
Sbjct: 255 KGRYGPECDWWSLGVCMYEML 275

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 80.0 bits (198), Expect = 3e-16
 Identities = 49/231 (21%), Positives = 86/231 (37%), Gaps = 48/231 (20%)

Query: 474 TANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEE--FKN---------EI 522
            + ++ +  +  G +G V  G    G  VA+KR+ +    G+      +         EI
Sbjct: 21  QSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREI 80

Query: 523 KLIAKLQHRNLVRLLGCCI-----ELEEKILIYEYMPN------KSLDFFLFDSTKENLL 571
           +L+    H N++ L    +      + +  L+ E M              +         
Sbjct: 81  RLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQ------ 134

Query: 572 GWGTRVR-IIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD 630
                ++  +  I  GL  LH+     V+HRDL   NILL  + +  I DF +AR    D
Sbjct: 135 ----HIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAREDTAD 187

Query: 631 ELQSKTKRIVGTYGYMSPEYAQQGLFSIKS-----DVFSFGVLLLETLSSK 676
             ++     V    Y +PE     +   K      D++S G ++ E  + K
Sbjct: 188 ANKTHY---VTHRWYRAPEL----VMQFKGFTKLVDMWSAGCVMAEMFNRK 231

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 79.4 bits (196), Expect = 9e-16
 Identities = 49/203 (24%), Positives = 84/203 (41%), Gaps = 19/203 (9%)

Query: 483 LGEGGFGPVYKGRLLNGQEV-AVKRLSSQSGQGQEE---FKNEIKLIAKLQHRNLVRLLG 538
           +G G F  V   ++    +V A+K ++      + E   F+ E  ++     R + +L  
Sbjct: 69  IGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLH- 127

Query: 539 CCIELEEKI-LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLR 597
              + E  + L+ EY     L   L     E +     R  + E I   +  +H+   L 
Sbjct: 128 FAFQDENYLYLVMEYYVGGDL-LTLLSKFGERIPAEMARFYLAE-IVMAIDSVHR---LG 182

Query: 598 VIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPE-------Y 650
            +HRD+K  NILLD+  + +++DFG       D    ++   VGT  Y+SPE        
Sbjct: 183 YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADG-TVRSLVAVGTPDYLSPEILQAVGGG 241

Query: 651 AQQGLFSIKSDVFSFGVLLLETL 673
              G +  + D ++ GV   E  
Sbjct: 242 PGTGSYGPECDWWALGVFAYEMF 264

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 78.6 bits (194), Expect = 1e-15
 Identities = 55/222 (24%), Positives = 90/222 (40%), Gaps = 41/222 (18%)

Query: 474 TANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKN---------EIK 523
              +     +G G  G V      +  + VA+K+LS         F+N         E+ 
Sbjct: 24  LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYRELV 76

Query: 524 LIAKLQHRNLVRLL------GCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRV 577
           L+  + H+N++ LL          E ++  ++ E M     D  L    +  L       
Sbjct: 77  LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-----DANLCQVIQMEL----DHE 127

Query: 578 RIIEGIAQ---GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQS 634
           R+   + Q   G+ +LH      +IHRDLK SNI++  D   KI DFG+AR  G   + +
Sbjct: 128 RMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMT 184

Query: 635 KTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
                V T  Y +PE      +    D++S G ++ E +   
Sbjct: 185 PY---VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 223

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 78.5 bits (194), Expect = 1e-15
 Identities = 56/207 (27%), Positives = 100/207 (48%), Gaps = 26/207 (12%)

Query: 483 LGEGGFGPVYKGRLLNGQEV-AVKRLSSQSGQGQEEFKN---EIKLIAKLQHRNLVRLLG 538
           +G+G FG V   +  + +++ A+K ++ Q    + E +N   E++++  L+H  LV L  
Sbjct: 23  IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLW- 81

Query: 539 CCIELEEKI-LIYEYMPNKSLDFFLFDSTK--ENLLGWGTRVR--IIEGIAQGLLYLHQY 593
              + EE + ++ + +    L + L  +    E        V+  I E +   L YL   
Sbjct: 82  YSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEE------TVKLFICE-LVMALDYLQN- 133

Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPE--YA 651
              R+IHRD+K  NILLD+  +  I+DF +A +   +    +   + GT  YM+PE   +
Sbjct: 134 --QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET---QITTMAGTKPYMAPEMFSS 188

Query: 652 QQGLFSIKS-DVFSFGVLLLETLSSKR 677
           ++G     + D +S GV   E L  +R
Sbjct: 189 RKGAGYSFAVDWWSLGVTAYELLRGRR 215

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 78.6 bits (194), Expect = 2e-15
 Identities = 41/210 (19%), Positives = 78/210 (37%), Gaps = 57/210 (27%)

Query: 474 TANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKN---------EIK 523
             N+  ++ +G G +G VY        + VA+K+++         F++         EI 
Sbjct: 25  PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNR-------MFEDLIDCKRILREIT 77

Query: 524 LIAKLQHRNLVRLLGCCI-----ELEEKILIYEYMP---------NKSLD-----FFLFD 564
           ++ +L+   ++RL    I     + +E  ++ E               L        L+ 
Sbjct: 78  ILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILY- 136

Query: 565 STKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMA 624
               NLL              G  ++H      +IHRDLK +N LL++D + K+ DFG+A
Sbjct: 137 ----NLL-------------LGENFIH--ES-GIIHRDLKPANCLLNQDCSVKVCDFGLA 176

Query: 625 RIFGGDELQSKTKRIVGTYGYMSPEYAQQG 654
           R    ++  +    +             + 
Sbjct: 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKK 206

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 78.7 bits (194), Expect = 2e-15
 Identities = 55/220 (25%), Positives = 91/220 (41%), Gaps = 37/220 (16%)

Query: 474 TANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKN---------EIK 523
              +     +G G  G V      +  + VA+K+LS         F+N         E+ 
Sbjct: 61  LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYRELV 113

Query: 524 LIAKLQHRNLVRLL------GCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRV 577
           L+  + H+N++ LL          E ++  L+ E M        L    +  L     R+
Sbjct: 114 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-----LCQVIQMEL--DHERM 166

Query: 578 R-IIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKT 636
             ++  +  G+ +LH      +IHRDLK SNI++  D   KI DFG+AR  G   + +  
Sbjct: 167 SYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY 223

Query: 637 KRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
              V T  Y +PE      +    D++S G ++ E +  K
Sbjct: 224 ---VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 75.7 bits (187), Expect = 7e-15
 Identities = 47/205 (22%), Positives = 80/205 (39%), Gaps = 60/205 (29%)

Query: 474 TANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKN---------EIK 523
           +++F  ++ LGEG +G V        G+ VA+K++          F           EIK
Sbjct: 10  SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEP--------FDKPLFALRTLREIK 61

Query: 524 LIAKLQHRNLVRLL-----GCCIELEEKILIYEYMP--------NKSLD-----FFLFDS 565
           ++   +H N++ +             E  +I E M          + L      +F++  
Sbjct: 62  ILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQ- 120

Query: 566 TKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR 625
                              + +  LH  +   VIHRDLK SN+L++ + + K+ DFG+AR
Sbjct: 121 -----------------TLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLAR 160

Query: 626 IFGGDELQSKTKRIVGTYGYMSPEY 650
           I   DE  +      G    M  E+
Sbjct: 161 II--DESAADNSEPTGQQSGMV-EF 182

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 75.8 bits (187), Expect = 9e-15
 Identities = 59/238 (24%), Positives = 104/238 (43%), Gaps = 69/238 (28%)

Query: 474 TANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKN---------EIK 523
              ++  + +GEG +G V      LN   VA+K++S         F++         EIK
Sbjct: 26  GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--------FEHQTYCQRTLREIK 77

Query: 524 LIAKLQHRNLVRLLGCCI-----ELEEKILIYEYMP--------NKSLD-----FFLFDS 565
           ++ + +H N++ +          ++++  ++ + M          + L      +FL+  
Sbjct: 78  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ- 136

Query: 566 TKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR 625
                            I +GL Y+H  S   V+HRDLK SN+LL+   + KI DFG+AR
Sbjct: 137 -----------------ILRGLKYIH--SA-NVLHRDLKPSNLLLNTTCDLKICDFGLAR 176

Query: 626 IFGGDELQSK--TKRIVGTYGYMSPEYAQQGLFSIKS-----DVFSFGVLLLETLSSK 676
           +   D   +   T+  V T  Y +PE     + + K      D++S G +L E LS++
Sbjct: 177 VADPDHDHTGFLTEY-VATRWYRAPEI----MLNSKGYTKSIDIWSVGCILAEMLSNR 229

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 75.4 bits (186), Expect = 1e-14
 Identities = 54/225 (24%), Positives = 95/225 (42%), Gaps = 48/225 (21%)

Query: 474 TANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKN---------EIK 523
              + +   +G G +G V       +G++VA+K+LS         F++         E+ 
Sbjct: 23  PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLS-------RPFQSEIFAKRAYRELL 75

Query: 524 LIAKLQHRNLVRLL------GCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRV 577
           L+  +QH N++ LL             +  L+  +M     D  L             ++
Sbjct: 76  LLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQT---D--LQKIMGLKFS--EEKI 128

Query: 578 R-IIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKT 636
           + ++  + +GL Y+H      V+HRDLK  N+ +++D   KI DFG+AR    +     T
Sbjct: 129 QYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAE----MT 181

Query: 637 KRIVGTYGYMSPEYAQQGLFSIKS-----DVFSFGVLLLETLSSK 676
              V T  Y +PE     + S        D++S G ++ E L+ K
Sbjct: 182 GY-VVTRWYRAPEV----ILSWMHYNQTVDIWSVGCIMAEMLTGK 221

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 75.0 bits (185), Expect = 1e-14
 Identities = 49/206 (23%), Positives = 86/206 (41%), Gaps = 21/206 (10%)

Query: 476 NFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLS----SQSGQGQEEFKNEIKLIAKLQH 530
            F     LG G FG V   +   +G   A+K L      +  Q  E   NE +++  +  
Sbjct: 42  QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQ-IEHTLNEKRILQAVNF 100

Query: 531 RNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTK--ENLLGWGTRVRIIEGIAQGLL 588
             LV+L     +     ++ EY+    +   L    +  E       R    + I     
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH----ARFYAAQ-IVLTFE 155

Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSP 648
           YLH      +I+RDLK  N+L+D+    +++DFG A+      ++ +T  + GT   ++P
Sbjct: 156 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEALAP 207

Query: 649 EYAQQGLFSIKSDVFSFGVLLLETLS 674
           E      ++   D ++ GVL+ E  +
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAA 233

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 75.1 bits (185), Expect = 2e-14
 Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 22/202 (10%)

Query: 483 LGEGGFGPVYKGRLLNGQEV-AVKRLSSQSGQGQEE---FKNEIKLIAKLQHRNLVRLLG 538
           +G G FG V   R  + ++V A+K LS      + +   F  E  ++A      +V+L  
Sbjct: 77  IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF- 135

Query: 539 CCIELEEKI-LIYEYMPNKSLDFFLFDSTK--ENLLGWGTRVRIIEGIAQGLLYLHQYSR 595
              + +  + ++ EYMP   L   L  +    E       R    E +   L  +H    
Sbjct: 136 YAFQDDRYLYMVMEYMPGGDL-VNLMSNYDVPEKW----ARFYTAE-VVLALDAIHS--- 186

Query: 596 LRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ--- 652
           +  IHRD+K  N+LLDK  + K++DFG       +    +    VGT  Y+SPE  +   
Sbjct: 187 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG-MVRCDTAVGTPDYISPEVLKSQG 245

Query: 653 -QGLFSIKSDVFSFGVLLLETL 673
             G +  + D +S GV L E L
Sbjct: 246 GDGYYGRECDWWSVGVFLYEML 267

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 75.2 bits (185), Expect = 3e-14
 Identities = 55/201 (27%), Positives = 87/201 (43%), Gaps = 23/201 (11%)

Query: 483 LGEGGFGPVYKGRLLNGQEV-AVKRLSSQSGQGQEEF---KNEIKLIAKLQHRNLVRLLG 538
           LG+G FG V   +        A+K L  +    ++E      E +++   +H  L  L  
Sbjct: 156 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK- 214

Query: 539 CCIELEEKI-LIYEYMPNKSLDFFLFDSTK--ENLLGWGTRVRI-IEGIAQGLLYLHQYS 594
              +  +++  + EY     L F L       E+      R R     I   L YLH  S
Sbjct: 215 YSFQTHDRLCFVMEYANGGELFFHLSRERVFSED------RARFYGAEIVSALDYLH--S 266

Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMAR--IFGGDELQSKTKRIVGTYGYMSPEYAQ 652
              V++RDLK  N++LDKD + KI+DFG+ +  I  G       K   GT  Y++PE  +
Sbjct: 267 EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA----TMKTFCGTPEYLAPEVLE 322

Query: 653 QGLFSIKSDVFSFGVLLLETL 673
              +    D +  GV++ E +
Sbjct: 323 DNDYGRAVDWWGLGVVMYEMM 343

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 73.4 bits (181), Expect = 3e-14
 Identities = 59/207 (28%), Positives = 101/207 (48%), Gaps = 34/207 (16%)

Query: 483 LGEGGFGPVYKGRLLNGQEV----AVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRL 536
           LG+G FG V+  + ++G +     A+K L   +   + +   K E  ++ ++ H  +V+L
Sbjct: 32  LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91

Query: 537 LGCCIELEEKI-LIYEYMPNKSLDFF------LFDSTKENLLGWGTRVRI-IEGIAQGLL 588
                + E K+ LI +++    L F       +F    E        V+  +  +A  L 
Sbjct: 92  H-YAFQTEGKLYLILDFLRGGDL-FTRLSKEVMFT---EE------DVKFYLAELALALD 140

Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR--IFGGDELQSKTKRIVGTYGYM 646
           +LH    L +I+RDLK  NILLD++ + K++DFG+++  I        K     GT  YM
Sbjct: 141 HLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK----KAYSFCGTVEYM 193

Query: 647 SPEYAQQGLFSIKSDVFSFGVLLLETL 673
           +PE   +   +  +D +SFGVL+ E L
Sbjct: 194 APEVVNRRGHTQSADWWSFGVLMFEML 220

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 73.1 bits (180), Expect = 5e-14
 Identities = 57/248 (22%), Positives = 95/248 (38%), Gaps = 80/248 (32%)

Query: 474 TANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKN---------EIK 523
            + +     LG GG G V+        + VA+K++            +         EIK
Sbjct: 10  GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIV---------LTDPQSVKHALREIK 60

Query: 524 LIAKLQHRNLVRLL--------------GCCIELEEKILIYEYMP--------NKSLD-- 559
           +I +L H N+V++               G   EL    ++ EYM            L   
Sbjct: 61  IIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEE 120

Query: 560 ---FFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLD-KDMN 615
               F++                   + +GL Y+H  +   V+HRDLK +N+ ++ +D+ 
Sbjct: 121 HARLFMYQ------------------LLRGLKYIHSAN---VLHRDLKPANLFINTEDLV 159

Query: 616 PKISDFGMARIFGGDELQSK--TKRIVGTYGYMSPEYAQQGLFSIKS-----DVFSFGVL 668
            KI DFG+ARI           ++ +V T  Y SP      L S  +     D+++ G +
Sbjct: 160 LKIGDFGLARIMDPHYSHKGHLSEGLV-TKWYRSPRL----LLSPNNYTKAIDMWAAGCI 214

Query: 669 LLETLSSK 676
             E L+ K
Sbjct: 215 FAEMLTGK 222

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 72.7 bits (179), Expect = 8e-14
 Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 31/173 (17%)

Query: 474 TANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKN---------EIK 523
            A +     +G G +G V        G +VA+K+L          F++         E++
Sbjct: 24  RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLY-------RPFQSELFAKRAYRELR 76

Query: 524 LIAKLQHRNLVRLL------GCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRV 577
           L+  ++H N++ LL          +  +  L+  +M        L    K   LG     
Sbjct: 77  LLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-----GTDLGKLMKHEKLGEDRIQ 131

Query: 578 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD 630
            ++  + +GL Y+H      +IHRDLK  N+ +++D   KI DFG+AR    +
Sbjct: 132 FLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADSE 181

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 71.6 bits (176), Expect = 9e-14
 Identities = 35/164 (21%), Positives = 63/164 (38%), Gaps = 36/164 (21%)

Query: 479 TENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKL-QHRNLVRL 536
           T   LG G  G V +       ++ A+K L         + + E++L  +  Q  ++VR+
Sbjct: 22  TSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRI 76

Query: 537 LGCCIELEEKILIYEYMPNKSLDFF----------LFDSTKENLLGWGTR---VRIIEGI 583
           +           +YE +                  LF   ++      T      I++ I
Sbjct: 77  VD----------VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 126

Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILL---DKDMNPKISDFGMA 624
            + + YLH    + + HRD+K  N+L      +   K++DFG A
Sbjct: 127 GEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 72.8 bits (179), Expect = 1e-13
 Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 54/208 (25%)

Query: 474 TANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKN---------EIK 523
              +    KLG+G +G V+K      G+ VAVK++        + F+N         EI 
Sbjct: 8   LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIF-------DAFQNSTDAQRTFREIM 60

Query: 524 LIAKLQ-HRNLVRLLGCCI--ELEEKILIYEYMP--------NKSLD-----FFLFDSTK 567
           ++ +L  H N+V LL         +  L+++YM            L+     + ++    
Sbjct: 61  ILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVY---- 116

Query: 568 ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF 627
             L+             + + YLH  S   ++HRD+K SNILL+ + + K++DFG++R F
Sbjct: 117 -QLI-------------KVIKYLH--SG-GLLHRDMKPSNILLNAECHVKVADFGLSRSF 159

Query: 628 GGDELQSKTKRIVGTYGYMSPEYAQQGL 655
                 +    +       + +  Q  L
Sbjct: 160 VNIRRVTNNIPLSINENTENFDDDQPIL 187

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 72.2 bits (176), Expect = 1e-13
 Identities = 36/199 (18%), Positives = 58/199 (29%), Gaps = 46/199 (23%)

Query: 473 ATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRL--------SSQSGQGQEEFKNEIKL 524
            T       K+GEG FG V++    +   VA+K +        +    +  EE   EI +
Sbjct: 18  PTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIII 76

Query: 525 IAKLQ---------HRNLVRLLGCCI----ELEEKILIYEYM------PNKSLDFF---- 561
             +L              + L              +  +++        N   DFF    
Sbjct: 77  SKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQ 136

Query: 562 ------------LFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNIL 609
                         +  +  L    T   I+  +   L        LR  HRDL   N+L
Sbjct: 137 LFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEA--SLRFEHRDLHWGNVL 194

Query: 610 LDKDMNPKISDFGMARIFG 628
           L K    K+      +   
Sbjct: 195 LKKTSLKKLHYTLNGKSST 213

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 71.9 bits (177), Expect = 1e-13
 Identities = 54/201 (26%), Positives = 85/201 (42%), Gaps = 24/201 (11%)

Query: 483 LGEGGFGPVYKGRLLNGQEV-AVKRLSSQSGQGQEEF---KNEIKLIAKLQHRNLVRLLG 538
           LG+G FG V   R        A+K L  +    ++E      E +++   +H  L  L  
Sbjct: 13  LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK- 71

Query: 539 CCIELEEKI-LIYEYMPNKSLDFFLFDSTK--ENLLGWGTRVRI-IEGIAQGLLYLHQYS 594
              +  +++  + EY     L F L       E       R R     I   L YLH   
Sbjct: 72  YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE------RARFYGAEIVSALEYLHS-- 123

Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMAR--IFGGDELQSKTKRIVGTYGYMSPEYAQ 652
              V++RD+K  N++LDKD + KI+DFG+ +  I  G       K   GT  Y++PE  +
Sbjct: 124 -RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA----TMKTFCGTPEYLAPEVLE 178

Query: 653 QGLFSIKSDVFSFGVLLLETL 673
              +    D +  GV++ E +
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMM 199

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 70.3 bits (173), Expect = 3e-13
 Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 21/199 (10%)

Query: 483 LGEGGFGPVYKGRLLNGQEV-AVKRLSSQS--GQGQEE-FKNEIKLIAKLQHRNLVRLLG 538
           LG G FG V+  R  +     A+K L  +      Q E   +E  +++ + H  ++R+ G
Sbjct: 14  LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWG 73

Query: 539 CCIELEEKI-LIYEYMPNKSLDFFLFDSTK--ENLLGWGTRVRIIEGIAQGLLYLHQYSR 595
              +  ++I +I +Y+    L   L  S +    +     +    E +   L YLH    
Sbjct: 74  TF-QDAQQIFMIMDYIEGGELFSLLRKSQRFPNPV----AKFYAAE-VCLALEYLHSKD- 126

Query: 596 LRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGL 655
             +I+RDLK  NILLDK+ + KI+DFG A+      +   T  + GT  Y++PE      
Sbjct: 127 --IIYRDLKPENILLDKNGHIKITDFGFAK-----YVPDVTYTLCGTPDYIAPEVVSTKP 179

Query: 656 FSIKSDVFSFGVLLLETLS 674
           ++   D +SFG+L+ E L+
Sbjct: 180 YNKSIDWWSFGILIYEMLA 198

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 69.9 bits (172), Expect = 5e-13
 Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 36/209 (17%)

Query: 483 LGEGGFGPVYKGRLLNGQEV----AVKRLS----SQSGQGQEEFKNEIKLIAKLQHRNLV 534
           LG+GG+G V++ R + G       A+K L      ++ +     K E  ++ +++H  +V
Sbjct: 25  LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84

Query: 535 RLLGCCIELEEKI-LIYEYMPNKSLDFF------LFDSTKENLLGWGTRVRI-IEGIAQG 586
            L+    +   K+ LI EY+    L F       +F    E+           +  I+  
Sbjct: 85  DLI-YAFQTGGKLYLILEYLSGGEL-FMQLEREGIFM---ED------TACFYLAEISMA 133

Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR--IFGGDELQSKTKRIVGTYG 644
           L +LHQ     +I+RDLK  NI+L+   + K++DFG+ +  I  G      T    GT  
Sbjct: 134 LGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT----VTHTFCGTIE 186

Query: 645 YMSPEYAQQGLFSIKSDVFSFGVLLLETL 673
           YM+PE   +   +   D +S G L+ + L
Sbjct: 187 YMAPEILMRSGHNRAVDWWSLGALMYDML 215

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 69.3 bits (170), Expect = 1e-12
 Identities = 47/168 (27%), Positives = 73/168 (43%), Gaps = 31/168 (18%)

Query: 474 TANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKN---------EIK 523
              +   + +G G +G V        G  VAVK+LS         F++         E++
Sbjct: 28  PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQSIIHAKRTYRELR 80

Query: 524 LIAKLQHRNLVRLL------GCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRV 577
           L+  ++H N++ LL          E  +  L+   M     D  L +  K   L      
Sbjct: 81  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA---D--LNNIVKCQKLTDDHVQ 135

Query: 578 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR 625
            +I  I +GL Y+H      +IHRDLK SN+ +++D   KI DFG+AR
Sbjct: 136 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 180

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 69.2 bits (170), Expect = 1e-12
 Identities = 56/212 (26%), Positives = 86/212 (40%), Gaps = 45/212 (21%)

Query: 483 LGEGGFGPVYKGRLLNGQEV-AVKRLSSQSGQGQEEFKNEIK--------------LIAK 527
           LG+G FG V         E+ AVK L           K+ +               L   
Sbjct: 28  LGKGSFGKVMLSERKGTDELYAVKILK----------KDVVIQDDDVECTMVEKRVLALP 77

Query: 528 LQHRNLVRLLGCCIELEEKI-LIYEYMPNKSLDFFLFDSTK--ENLLGWGTRVRIIEG-I 583
            +   L +L   C +  +++  + EY+    L + +    +  E               I
Sbjct: 78  GKPPFLTQLH-SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEP------HAVFYAAEI 130

Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR--IFGGDELQSKTKRIVG 641
           A GL +L       +I+RDLK  N++LD + + KI+DFGM +  I+ G      TK   G
Sbjct: 131 AIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV----TTKTFCG 183

Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLETL 673
           T  Y++PE      +    D ++FGVLL E L
Sbjct: 184 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML 215

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 68.8 bits (169), Expect = 1e-12
 Identities = 61/212 (28%), Positives = 91/212 (42%), Gaps = 45/212 (21%)

Query: 483 LGEGGFGPVYKGRLLNGQEV-AVKRLSSQSGQGQEEFKNEIK--------------LIAK 527
           LG+G FG V   R+    ++ AVK L           K+ I               L   
Sbjct: 31  LGKGSFGKVMLARVKETGDLYAVKVLK----------KDVILQDDDVECTMTEKRILSLA 80

Query: 528 LQHRNLVRLLGCCIELEEKI-LIYEYMPNKSLDFFLFDSTK--ENLLGWGTRVRIIEG-I 583
             H  L +L  CC +  +++  + E++    L F +  S +  E       R R     I
Sbjct: 81  RNHPFLTQLF-CCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEA------RARFYAAEI 133

Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMA--RIFGGDELQSKTKRIVG 641
              L++LH      +I+RDLK  N+LLD + + K++DFGM    I  G      T    G
Sbjct: 134 ISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGV----TTATFCG 186

Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLETL 673
           T  Y++PE  Q+ L+    D ++ GVLL E L
Sbjct: 187 TPDYIAPEILQEMLYGPAVDWWAMGVLLYEML 218

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 68.4 bits (168), Expect = 2e-12
 Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 25/203 (12%)

Query: 483 LGEGGFGPVYKGRLLNGQEV-AVKRLSSQSGQGQEEF---KNEIK-LIAKLQHRNLVRLL 537
           +G G +  V   RL     + A+K +  +     E+    + E         H  LV L 
Sbjct: 17  IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 76

Query: 538 GCCIELEEKI-LIYEYMPNKSLDFFLFDSTK--ENLLGWGTRVRI-IEGIAQGLLYLHQY 593
             C + E ++  + EY+    L F +    K  E         R     I+  L YLH+ 
Sbjct: 77  -SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEE------HARFYSAEISLALNYLHE- 128

Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMAR--IFGGDELQSKTKRIVGTYGYMSPEYA 651
               +I+RDLK  N+LLD + + K++D+GM +  +  GD     T    GT  Y++PE  
Sbjct: 129 --RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD----TTSTFCGTPNYIAPEIL 182

Query: 652 QQGLFSIKSDVFSFGVLLLETLS 674
           +   +    D ++ GVL+ E ++
Sbjct: 183 RGEDYGFSVDWWALGVLMFEMMA 205

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 68.4 bits (168), Expect = 2e-12
 Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 33/206 (16%)

Query: 483 LGEGGFGPVYKGRLLNGQEV-AVKRLSSQSGQGQEEF---KNEIK-LIAKLQHRNLVRLL 537
           +G+G FG V   R    +   AVK L  ++   ++E     +E   L+  ++H  LV L 
Sbjct: 46  IGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLH 105

Query: 538 GCCIELEEKI-LIYEYMPNKSLDFF------LFDSTKENLLGWGTRVRI-IEGIAQGLLY 589
               +  +K+  + +Y+    L F+       F    E       R R     IA  L Y
Sbjct: 106 -FSFQTADKLYFVLDYINGGEL-FYHLQRERCFL---EP------RARFYAAEIASALGY 154

Query: 590 LHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR--IFGGDELQSKTKRIVGTYGYMS 647
           LH    L +++RDLK  NILLD   +  ++DFG+ +  I         T    GT  Y++
Sbjct: 155 LHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNS----TTSTFCGTPEYLA 207

Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETL 673
           PE   +  +    D +  G +L E L
Sbjct: 208 PEVLHKQPYDRTVDWWCLGAVLYEML 233

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 68.4 bits (168), Expect = 2e-12
 Identities = 57/202 (28%), Positives = 88/202 (43%), Gaps = 25/202 (12%)

Query: 483 LGEGGFGPVYKGRLLNGQEV-AVKRLSSQSGQGQEEFKNEIK----LIAKLQHRNLVRLL 537
           LG+G FG V+        +  A+K L        ++ +  +     L    +H  L  + 
Sbjct: 25  LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMF 84

Query: 538 GCCIELEEKI-LIYEYMPNKSLDFFL--FDSTKENLLGWGTRVRIIEG-IAQGLLYLHQY 593
            C  + +E +  + EY+    L + +        +      R       I  GL +LH  
Sbjct: 85  -CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLS------RATFYAAEIILGLQFLHS- 136

Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMAR--IFGGDELQSKTKRIVGTYGYMSPEYA 651
               +++RDLK  NILLDKD + KI+DFGM +  + G      KT    GT  Y++PE  
Sbjct: 137 --KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA----KTNTFCGTPDYIAPEIL 190

Query: 652 QQGLFSIKSDVFSFGVLLLETL 673
               ++   D +SFGVLL E L
Sbjct: 191 LGQKYNHSVDWWSFGVLLYEML 212

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 69.7 bits (170), Expect = 2e-12
 Identities = 56/212 (26%), Positives = 86/212 (40%), Gaps = 45/212 (21%)

Query: 483 LGEGGFGPVYKGRLLNGQEV-AVKRLSSQSGQGQEEFKNEIK--------------LIAK 527
           LG+G FG V         E+ AVK L           K+ +               L   
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKILK----------KDVVIQDDDVECTMVEKRVLALP 398

Query: 528 LQHRNLVRLLGCCIELEEKI-LIYEYMPNKSLDFFLFDSTK--ENLLGWGTRVRIIEG-I 583
            +   L +L   C +  +++  + EY+    L + +    +  E               I
Sbjct: 399 GKPPFLTQLH-SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEP------HAVFYAAEI 451

Query: 584 AQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR--IFGGDELQSKTKRIVG 641
           A GL +L       +I+RDLK  N++LD + + KI+DFGM +  I+ G      TK   G
Sbjct: 452 AIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV----TTKTFCG 504

Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLETL 673
           T  Y++PE      +    D ++FGVLL E L
Sbjct: 505 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML 536

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 68.1 bits (167), Expect = 3e-12
 Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 8/94 (8%)

Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGT 642
           I   L +LH+   L +I+RD+K  NILLD + +  ++DFG+++ F  DE   +     GT
Sbjct: 168 IVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADE-TERAYDFCGT 223

Query: 643 YGYMSPE---YAQQGLFSIKSDVFSFGVLLLETL 673
             YM+P+       G      D +S GVL+ E L
Sbjct: 224 IEYMAPDIVRGGDSG-HDKAVDWWSLGVLMYELL 256

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 68.1 bits (167), Expect = 3e-12
 Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 25/203 (12%)

Query: 483 LGEGGFGPVYKGRLLNGQEV-AVKRLSSQSGQGQEEF---KNEIK-LIAKLQHRNLVRLL 537
           +G G +  V   RL     + A++ +  +     E+    + E         H  LV L 
Sbjct: 60  IGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 119

Query: 538 GCCIELEEKI-LIYEYMPNKSLDFFLFDSTK--ENLLGWGTRVRIIEG-IAQGLLYLHQY 593
             C + E ++  + EY+    L F +    K  E         R     I+  L YLH+ 
Sbjct: 120 -SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEE------HARFYSAEISLALNYLHE- 171

Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMAR--IFGGDELQSKTKRIVGTYGYMSPEYA 651
               +I+RDLK  N+LLD + + K++D+GM +  +  GD     T    GT  Y++PE  
Sbjct: 172 --RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD----TTSTFCGTPNYIAPEIL 225

Query: 652 QQGLFSIKSDVFSFGVLLLETLS 674
           +   +    D ++ GVL+ E ++
Sbjct: 226 RGEDYGFSVDWWALGVLMFEMMA 248

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 66.6 bits (163), Expect = 4e-12
 Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 20/183 (10%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQH-RNL 533
            +    K+G G FG +Y G  +  G+EVA+K    ++   Q     E K+   +Q    +
Sbjct: 10  RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQ--LHIESKIYKMMQGGVGI 67

Query: 534 VRLLGCCIELEEKILIYEYMPNKSL-DFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
             +  C  E +  +++ E +   SL D F F S K +L    T + + + +   + Y+H 
Sbjct: 68  PTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSL---KTVLLLADQMISRIEYIHS 123

Query: 593 YSRLRVIHRDLKASNILLDKDMNPK---ISDFGMARIFGGDE-----LQSKTKRIVGTYG 644
            +    IHRD+K  N L+          I DFG+A+ +            + K + GT  
Sbjct: 124 KN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTAR 180

Query: 645 YMS 647
           Y S
Sbjct: 181 YAS 183

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 67.3 bits (164), Expect = 7e-12
 Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 20/183 (10%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
            F    K+G G FG +Y G  +   +EVA+K  + ++   Q     E K+   LQ    +
Sbjct: 8   KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ--LLYESKIYRILQGGTGI 65

Query: 535 -RLLGCCIELEEKILIYEYMPNKSL-DFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
             +    +E +  +L+ + +   SL D F F S K +L    T + + + +   + ++H 
Sbjct: 66  PNVRWFGVEGDYNVLVMDLL-GPSLEDLFNFCSRKLSL---KTVLMLADQMINRVEFVHS 121

Query: 593 YSRLRVIHRDLKASNILLDKDMNPK---ISDFGMARIFGGDELQS-----KTKRIVGTYG 644
            S    +HRD+K  N L+          I DFG+A+ +            + K + GT  
Sbjct: 122 KS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTAR 178

Query: 645 YMS 647
           Y S
Sbjct: 179 YAS 181

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 65.9 bits (161), Expect = 1e-11
 Identities = 44/185 (23%), Positives = 76/185 (41%), Gaps = 22/185 (11%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQH-RNL 533
           NF    K+G G FG +  G+ L   + VA+K    +S   Q     E +   +L     +
Sbjct: 10  NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHL--EYRFYKQLGSGDGI 67

Query: 534 VRLLGCCIELEEKILIYEYMPNKSL-DFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
            ++       +   ++ E +   SL D F       +L    T + I   +   + Y+H 
Sbjct: 68  PQVYYFGPCGKYNAMVLELL-GPSLEDLFDLCDRTFSL---KTVLMIAIQLISRMEYVHS 123

Query: 593 YSRLRVIHRDLKASNILLDKDMNPK-----ISDFGMARIFGGDELQS-----KTKRIVGT 642
            +   +I+RD+K  N L+ +  N       I DF +A+ +   E +      + K + GT
Sbjct: 124 KN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGT 180

Query: 643 YGYMS 647
             YMS
Sbjct: 181 ARYMS 185

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 65.5 bits (160), Expect = 2e-11
 Identities = 49/223 (21%), Positives = 88/223 (39%), Gaps = 54/223 (24%)

Query: 482 KLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQ----------- 529
           KLG G F  V+  + ++N   VA+K +        E  ++EIKL+ ++            
Sbjct: 26  KLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMG 84

Query: 530 HRNLVRLLGC-----------CIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVR 578
             ++++LL              +  E             L   L    K+     G  + 
Sbjct: 85  ANHILKLLDHFNHKGPNGVHVVMVFE------------VLGENLLALIKKYEHR-GIPLI 131

Query: 579 IIEGIAQ----GLLYLHQYSRLRVIHRDLKASNILLDKDMNP------KISDFGMARIFG 628
            ++ I++    GL Y+H   R  +IH D+K  N+L++   +P      KI+D G A  + 
Sbjct: 132 YVKQISKQLLLGLDYMH--RRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA-CWY 188

Query: 629 GDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
            +   +     + T  Y SPE      +   +D++S   L+ E
Sbjct: 189 DEHYTN----SIQTREYRSPEVLLGAPWGCGADIWSTACLIFE 227

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 63.9 bits (156), Expect = 4e-11
 Identities = 41/185 (22%), Positives = 79/185 (42%), Gaps = 22/185 (11%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQH-RNL 533
           ++    ++GEG FG +++G  LLN Q+VA+K    +S   Q   ++E +    L     +
Sbjct: 11  HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQ--LRDEYRTYKLLAGCTGI 68

Query: 534 VRLLGCCIELEEKILIYEYMPNKSL-DFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
             +     E    +L+ + +   SL D       K ++    T     + +   +  +H+
Sbjct: 69  PNVYYFGQEGLHNVLVIDLLG-PSLEDLLDLCGRKFSV---KTVAMAAKQMLARVQSIHE 124

Query: 593 YSRLRVIHRDLKASNILLDKDMNPK-----ISDFGMARIFGGDE-----LQSKTKRIVGT 642
            S   +++RD+K  N L+ +  +       + DFGM + +            + K + GT
Sbjct: 125 KS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGT 181

Query: 643 YGYMS 647
             YMS
Sbjct: 182 ARYMS 186

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 61.3 bits (149), Expect = 5e-10
 Identities = 49/216 (22%), Positives = 81/216 (37%), Gaps = 50/216 (23%)

Query: 481 NKLGEGGFGPVYKGR-LLNGQEVAVK------RLSSQSGQGQEEFKNEIKLIAKLQHR-- 531
           + +G+G FG V K    +  + VA+K         +Q+       + E++L+  +     
Sbjct: 60  SLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQA-------QIEVRLLELMNKHDT 112

Query: 532 ----NLVRLLGC-------CIELEEKILIYEYMPNKSLDFFLFDSTKEN-LLGWGTR-VR 578
                +V L          C+  E             L + L+D  +     G      R
Sbjct: 113 EMKYYIVHLKRHFMFRNHLCLVFE------------MLSYNLYDLLRNTNFRGVSLNLTR 160

Query: 579 II-EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNP--KISDFGMARIFGGDELQSK 635
              + +   LL+L     L +IH DLK  NILL        KI DFG +    G  +   
Sbjct: 161 KFAQQMCTALLFLAT-PELSIIHCDLKPENILLCNPKRSAIKIVDFGSS-CQLGQRIYQ- 217

Query: 636 TKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
               + +  Y SPE      + +  D++S G +L+E
Sbjct: 218 ---YIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVE 250

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Length = 110

 Score = 56.3 bits (136), Expect = 6e-10
 Identities = 22/128 (17%), Positives = 42/128 (32%), Gaps = 19/128 (14%)

Query: 26  DNITPSRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPDTIVWVANRNSPIFD 85
           ++++    +  G  L      + L              + Y       VW +N       
Sbjct: 2   NSLSSPNSLFTGHSL-EVGPSYRLIMQGDCNF------VLYDS--GKPVWASNTGGLGSG 52

Query: 86  SNAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYL 145
               L   N G LV+ +Q+N  IW +  + +  + V  L    N+V+            +
Sbjct: 53  CRLTLH--NNGNLVIYDQSNRVIWQTKTNGKEDHYVLVLQQDRNVVIYGPV--------V 102

Query: 146 WQSFDHPS 153
           W +   P+
Sbjct: 103 WATGSGPA 110

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 60.1 bits (146), Expect = 9e-10
 Identities = 29/200 (14%), Positives = 73/200 (36%), Gaps = 34/200 (17%)

Query: 476 NFSTENKLGEGGFGPVYKGR---------LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIA 526
            +  ++       G +Y+               Q+ ++K L ++ G+   E     +   
Sbjct: 43  QWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLK-LDAKDGRLFNEQNFFQRAAK 101

Query: 527 KLQHRNLVRLLGC---CI---------ELEEKILIYEYMPNKSLDFFLFDSTKENLLGWG 574
            LQ     +L       I         + + + L+   +  +SL     D + +++L   
Sbjct: 102 PLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQS-ALDVSPKHVLSER 159

Query: 575 TRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKI--SDFGMARIF--GGD 630
           + +++   +   L +LH+      +H ++ A NI +D +   ++  + +G A  +   G 
Sbjct: 160 SVLQVACRLLDALEFLHENE---YVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGK 216

Query: 631 EL---QSKTKRIVGTYGYMS 647
            +   +       G   ++S
Sbjct: 217 HVAYVEGSRSPHEGDLEFIS 236

>1kj1_A Lectin I, lecgna 1; BULB lectin, mannose, plant protein; HET: MAN; 2.20A {Allium sativum} SCOP: b.78.1.1 PDB: 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Length = 109

 Score = 54.1 bits (130), Expect = 3e-09
 Identities = 20/126 (15%), Positives = 42/126 (33%), Gaps = 19/126 (15%)

Query: 26  DNITPSRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPDTIVWVANRNSPIFD 85
           + +T    +  G+ L      +                + Y     T VW +N       
Sbjct: 2   NLLTNGEGLYAGQSLDVE--PYHFIMQEDCNL------VLYD--HSTSVWASNTGILG-K 50

Query: 86  SNAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYL 145
                 + + G  V+ +    ++W+S+  R   N V  L + GN+V+  +         +
Sbjct: 51  KGCKAVLQSDGNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVVIYGS--------DI 102

Query: 146 WQSFDH 151
           W +  +
Sbjct: 103 WSTGTY 108

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 57.8 bits (140), Expect = 7e-09
 Identities = 56/218 (25%), Positives = 85/218 (38%), Gaps = 60/218 (27%)

Query: 483 LGEGGFGPVYKGR-LLNGQEVAVK------RLSSQSGQGQEEFKNEIKLIAKLQHR---- 531
           +G+G FG V K       Q VA+K      R   Q+         EI+++  L+ +    
Sbjct: 105 IGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQA-------AEEIRILEHLRKQDKDN 157

Query: 532 --NLVRLLGC-------CIELEEKILIYEYMPNKSLDFFLFDSTKEN-LLGWGTR-VRII 580
             N++ +L         C+  E             L   L++  K+N   G+    VR  
Sbjct: 158 TMNVIHMLENFTFRNHICMTFE------------LLSMNLYELIKKNKFQGFSLPLVRKF 205

Query: 581 -EGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNP--KISDFGMARIFGGDELQSKTK 637
              I Q L  LH   + R+IH DLK  NILL +      K+ DFG +             
Sbjct: 206 AHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSS---------CYEH 253

Query: 638 RIVGTY----GYMSPEYAQQGLFSIKSDVFSFGVLLLE 671
           + V TY     Y +PE      + +  D++S G +L E
Sbjct: 254 QRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAE 291

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 57.5 bits (139), Expect = 8e-09
 Identities = 37/201 (18%), Positives = 75/201 (37%), Gaps = 36/201 (17%)

Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQ------EVAVKRLSSQSGQGQEEFKNEIKL----- 524
            +     +G+GGFG +Y   + + +         VK   S +G    E K   +      
Sbjct: 36  AWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQ 95

Query: 525 IAKLQHRNLVRLLG----------CCIELEEKILIYEYMPNKSL-DFFLFDSTKENLLGW 573
           I K      ++ LG                 + +I +      L   +  ++ + +    
Sbjct: 96  IQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSR--- 151

Query: 574 GTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKI--SDFGMARIFGGDE 631
            T +++   I   L Y+H++     +H D+KASN+LL+     ++   D+G+A  +  + 
Sbjct: 152 KTVLQLSLRILDILEYIHEHE---YVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEG 208

Query: 632 L-----QSKTKRIVGTYGYMS 647
           +         +   GT  + S
Sbjct: 209 VHKAYAADPKRCHDGTIEFTS 229

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Length = 115

 Score = 52.6 bits (126), Expect = 2e-08
 Identities = 19/123 (15%), Positives = 38/123 (30%), Gaps = 20/123 (16%)

Query: 26  DNITPSRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPDTIVWVANRNSPIFD 85
           + +   + +     L +    + L   +          + Y+      +W +N +     
Sbjct: 3   NVLLSGQTLHADHSLQAG--AYTLTIQNKCNL------VKYQN--GRQIWASNTDRR--G 50

Query: 86  SNAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYL 145
           S   LT+ + G LV+ +  N  +W S    +       L   G  V+            L
Sbjct: 51  SGCRLTLLSDGNLVIYDHNNNDVWGSACWGDNGKYALVLQKDGRFVIYGPV--------L 102

Query: 146 WQS 148
           W  
Sbjct: 103 WSL 105

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Length = 112

 Score = 51.9 bits (124), Expect = 2e-08
 Identities = 26/124 (20%), Positives = 48/124 (38%), Gaps = 18/124 (14%)

Query: 25  ADNITPSRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPDTIVWVANRNSPIF 84
           +D +     +  G  L      +     +        L ++     +  VW +  N    
Sbjct: 1   SDRLNSGHQLDTGGSLAE--GGYLFIIQNDCN-----LVLYDN---NRAVWASGTNGK-- 48

Query: 85  DSNAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDY 144
            S  VL + N G LV+ +  +  IW+SN +R+  N    L    N+V+ D     +S + 
Sbjct: 49  ASGCVLKMQNDGNLVIYSG-SRAIWASNTNRQNGNYYLILQRDRNVVIYD-----NSNNA 102

Query: 145 LWQS 148
           +W +
Sbjct: 103 IWAT 106

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 56.8 bits (136), Expect = 3e-08
 Identities = 89/677 (13%), Positives = 175/677 (25%), Gaps = 228/677 (33%)

Query: 151 HPSDTLLAGMKLGW-DLKTGLERYQTSWKSD-------DDPSPGNYTHRLDIHVLPKLCT 202
           H  D      +  + D+   L  ++ ++  +       D P        +D H++     
Sbjct: 5   HHMDFETGEHQYQYKDI---LSVFEDAFVDNFDCKDVQDMPKSILSKEEID-HIIMSKDA 60

Query: 203 YNGSVKL---LCSGPWNGA-IF---AAIPSYSYLYKPTVVDNEDE-------IYYRYDSY 248
            +G+++L   L S        F       +Y +L  P   +           I  R   Y
Sbjct: 61  VSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLY 120

Query: 249 NSPVIMTLKLNPSGKIQHLIWNERNRTWEAFFSL-PDRFCQFYGH--CG----ANSICSF 301
           N   +   K N S          R     A   L P +     G    G    A  +C  
Sbjct: 121 NDNQVFA-KYNVS--RLQPYLKLRQ----ALLELRPAKNVLIDGVLGSGKTWVALDVCL- 172

Query: 302 DKKPHC------------ECLKGFEL------------KSHHNKTRPGTCVRSQSSDCKS 337
             K  C             C     +             +  +++   + ++ +    ++
Sbjct: 173 SYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQA 232

Query: 338 GDRFIM-----------LDDVKLPDFVEASLNESMNVKECEAECLKNCTCRAYANSKVTG 386
             R ++           L +V+      A      N+            C+         
Sbjct: 233 ELRRLLKSKPYENCLLVLLNVQNAKAWNA-----FNLS-----------CKI-------- 268

Query: 387 EGSGCLMWFGDLI---DIRKADDRNNGQSIYIRV--PASELETKKSQDMLQFDINMSIAT 441
                      L+     +  D  +   + +I +   +  L   + + +L   ++     
Sbjct: 269 -----------LLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQD 317

Query: 442 RANELCKGNKAANSRTRDSWFPMFSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQE 501
              E+   N            P   L+ ++ +                            
Sbjct: 318 LPREVLTTN------------P-RRLSIIAESI--------------------------- 337

Query: 502 VAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIE-LEEKIL--IYEYMPNKSL 558
                          +          +    L  ++   +  LE      +++       
Sbjct: 338 --------------RDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFD------- 376

Query: 559 DFFLF-DSTK--ENLLG--WGTRVRI-IEGIAQGLLYLHQYSRLRVIHRDLKASNI---L 609
              +F  S      LL   W   ++  +  +      LH+YS   ++ +  K S I    
Sbjct: 377 RLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNK---LHKYS---LVEKQPKESTISIPS 430

Query: 610 LDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSD--VFSF-G 666
           +  ++  K+           +   +  + IV  Y      +    L     D   +S  G
Sbjct: 431 IYLELKVKL-----------ENEYALHRSIVDHYNIPK-TFDSDDLIPPYLDQYFYSHIG 478

Query: 667 VLLLETLSSKRNTDFSNTNSLTLLGHAW---DLWKDDRAWEL---IDPTLQNEASYLILN 720
             L      +R T F        L   +    +  D  AW     I  TLQ    Y    
Sbjct: 479 HHLKNIEHPERMTLFRM----VFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFY---K 531

Query: 721 RYINVGLLCVQEDAADR 737
            YI     C  +   +R
Sbjct: 532 PYI-----CDNDPKYER 543

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.6 bits (107), Expect = 6e-05
 Identities = 55/339 (16%), Positives = 96/339 (28%), Gaps = 108/339 (31%)

Query: 8   YNFISCVFILSIKLSIAADNITPS----RFIRDGEKLVSSSQRF---------------- 47
           Y F+           I  +   PS     +I   ++L + +Q F                
Sbjct: 91  YKFLMS--------PIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQ 142

Query: 48  ---EL------------GFFSPGKS-----KYRYLGIWYKQIPDTIVW--VANRNSPIFD 85
              EL            G    GK+           +   ++   I W  + N NSP   
Sbjct: 143 ALLELRPAKNVLIDGVLGS---GKTWVALDVCLSYKV-QCKMDFKIFWLNLKNCNSP--- 195

Query: 86  SNAVLTISNGGKLVLLNQTNGTIWSSNLSR------EVKNPVAQLLDTGN----LVVRDN 135
              VL +    KL+     N T  S + S        ++  + +LL +      L+V  N
Sbjct: 196 -ETVLEMLQ--KLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN 252

Query: 136 FSSNSSEDYLWQSFDHPSDTLLAGMKLGWDLKTGLERYQTSWKSD-DDPSPGNYTHRLDI 194
             +       W +F+     LL          T      T +K   D  S    TH    
Sbjct: 253 VQNAK----AWNAFNLSCKILL----------T------TRFKQVTDFLSAATTTHISLD 292

Query: 195 HVLPKLCTYNGSVKLLCSGPWNGAIFAAIPSYSYLYKPTVV--------DNEDEI-YYRY 245
           H    L T +    LL    +       +P       P  +        D       +++
Sbjct: 293 HHSMTL-TPDEVKSLLLK--YLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKH 349

Query: 246 DSYNSPVIMTLKLNPSGKIQHLIWNERNRTWEAFFSLPD 284
            + +  +   ++      +  L   E  + ++     P 
Sbjct: 350 VNCD-KLTTIIES----SLNVLEPAEYRKMFDRLSVFPP 383

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Length = 119

 Score = 50.7 bits (121), Expect = 7e-08
 Identities = 15/78 (19%), Positives = 30/78 (38%), Gaps = 10/78 (12%)

Query: 71  DTIVWVANRNSPIFDSNAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGNL 130
           +  +W  N       +     +   G LV++   N T+W S ++ +  + V  L    N+
Sbjct: 48  NNPIWATNTGGL--GNGCRAVLQPDGVLVVITNENVTVWQSPVAGKAGHYVLVLQPDRNV 105

Query: 131 VVRDNFSSNSSEDYLWQS 148
           V+  +         LW +
Sbjct: 106 VIYGDA--------LWAT 115

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Length = 119

 Score = 40.3 bits (94), Expect = 3e-04
 Identities = 18/88 (20%), Positives = 26/88 (29%), Gaps = 6/88 (6%)

Query: 61  YLGIWYKQIPDTIVWVANRNSPIFDSNAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNP 120
           +        P  +    +             +     LVL +  N  IW++N        
Sbjct: 5   FSKQPDDNHPQILHATESLEILFGTHVYRFIMQTDCNLVLYDN-NNPIWATNTGGLGNGC 63

Query: 121 VAQLLDTGNLVVRDNFSSNSSEDYLWQS 148
            A L   G LVV  N         +WQS
Sbjct: 64  RAVLQPDGVLVVITN-----ENVTVWQS 86

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 54.0 bits (130), Expect = 9e-08
 Identities = 37/198 (18%), Positives = 73/198 (36%), Gaps = 33/198 (16%)

Query: 476 NFSTENKLGEGGFGPVYKG-RLLNGQEVA---VKRLSSQSGQGQEEFKNEIKL-----IA 526
            +    K+G GGFG +Y        ++ A   VK    ++G    E K   ++     I 
Sbjct: 38  QWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIK 97

Query: 527 KLQHRNLVRLLG----------CCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTR 576
           K   R  +  LG                 + ++ E +    L      +         T 
Sbjct: 98  KWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKK---STV 153

Query: 577 VRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKI--SDFGMARIFGGDEL-- 632
           +++   +   L Y+H+      +H D+KA+N+LL      ++  +D+G++  +  +    
Sbjct: 154 LQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHK 210

Query: 633 ---QSKTKRIVGTYGYMS 647
              ++  K   GT  + S
Sbjct: 211 QYQENPRKGHNGTIEFTS 228

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Length = 109

 Score = 49.9 bits (119), Expect = 9e-08
 Identities = 27/119 (22%), Positives = 46/119 (38%), Gaps = 15/119 (12%)

Query: 26  DNI-TPSRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPDTIVWVANRNSPIF 84
           DNI      +  GE L  ++ R+                + Y    D  +W  N      
Sbjct: 1   DNILYSGETLSPGEFL--NNGRYVFIMQEDCNL------VLYDV--DKPIWATNTGGL-- 48

Query: 85  DSNAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGNLVVRDN--FSSNSS 141
           D    L++ + G LV+ +  N  IW+SN   E  N V  L    N+V+     +++ ++
Sbjct: 49  DRRCHLSMQSDGNLVVYSPRNNPIWASNTGGENGNYVCVLQKDRNVVIYGTARWATGTN 107

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 52.2 bits (125), Expect = 3e-07
 Identities = 51/246 (20%), Positives = 87/246 (35%), Gaps = 42/246 (17%)

Query: 482 KLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQ--------HRN 532
           KLG G F  V+    +   + VA+K + S      E   +EI+L+  ++           
Sbjct: 44  KLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREM 102

Query: 533 LVRLLGC-----------CIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIE 581
           +V+LL             C       +++E +    L  ++  S     L      +II+
Sbjct: 103 VVQLLDDFKISGVNGTHIC-------MVFEVL-GHHLLKWIIKS-NYQGLPLPCVKKIIQ 153

Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            + QGL YLH  ++ R+IH D+K  NILL  +          A  +        +   V 
Sbjct: 154 QVLQGLDYLH--TKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVS 211

Query: 642 TYGYMSPEYAQQGLFSIKSDVFS--FGVLLLETLSSKRNTDFSNTNSL----TLLGHAW- 694
           T    +  +    L    ++        L       K  T+   T        L+G  + 
Sbjct: 212 TAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYN 271

Query: 695 ---DLW 697
              D+W
Sbjct: 272 TPADIW 277

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 113

 Score = 46.0 bits (109), Expect = 3e-06
 Identities = 19/109 (17%), Positives = 41/109 (37%), Gaps = 11/109 (10%)

Query: 25  ADNI-TPSRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPDTIVWVANRNSPI 83
             N+   S+ + D  +L  +++ + L              +  K     IVW +  +   
Sbjct: 5   VRNVLFSSQVMYDNAQL--ATRDYSLVMRDDCNL------VLTKGSKTNIVWESGTSGR- 55

Query: 84  FDSNAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGNLVV 132
              +  + + + G+L + +    T++ SN   +  + V  L   G  VV
Sbjct: 56  -GQHCFMRLGHSGELDITDDRLNTVFVSNTVGQEGDYVLILQINGQAVV 103

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 110

 Score = 46.0 bits (109), Expect = 3e-06
 Identities = 21/115 (18%), Positives = 43/115 (37%), Gaps = 15/115 (13%)

Query: 28  ITPSRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPDTIVWVANRNSPIFDSN 87
           +   + +    +L +  +  +L              + Y        W +N +      +
Sbjct: 9   LFSGQVLYGDGRLTA--KNHQLVMQGDCNL------VLYGG---KYGWQSNTHGN--GEH 55

Query: 88  AVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGNLVVRDN--FSSNS 140
             L +++ G+L++ +    TIWSS  S +    V  L D G  V+     F ++S
Sbjct: 56  CFLRLNHKGELIIKDDDFKTIWSSRSSSKQGEYVLILQDDGFGVIYGPAIFETSS 110

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 49.2 bits (118), Expect = 3e-06
 Identities = 50/240 (20%), Positives = 78/240 (32%), Gaps = 84/240 (35%)

Query: 482 KLGEGGFGPVYKG--RLLNGQEVAVK------RLSSQSGQGQEEFKNEIKLIAKLQHR-- 531
            LGEG FG V +         +VA+K      +    +       + EI ++ K++ +  
Sbjct: 26  NLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAA-------RLEINVLKKIKEKDK 78

Query: 532 ----NLVRLLGC-------CIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRII 580
                 V +          CI  E             L    F+  KEN       +  +
Sbjct: 79  ENKFLCVLMSDWFNFHGHMCIAFE------------LLGKNTFEFLKENNFQ-PYPLPHV 125

Query: 581 EGIAQGLL----YLHQYSRLRVIHRDLKASNILLDKDMNP-------------------K 617
             +A  L     +LH     ++ H DLK  NIL                          +
Sbjct: 126 RHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIR 182

Query: 618 ISDFGMARIFGGDELQSKTKRIVGTYGYMSPE------YAQQGLFSIKSDVFSFGVLLLE 671
           ++DFG A  F  +   +    IV T  Y  PE      +      +   DV+S G +L E
Sbjct: 183 VADFGSA-TFDHEHHTT----IVATRHYRPPEVILELGW------AQPCDVWSIGCILFE 231

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 49.2 bits (118), Expect = 3e-06
 Identities = 40/180 (22%), Positives = 64/180 (35%), Gaps = 46/180 (25%)

Query: 482 KLGEGGFGPVYKGR-LLNGQEVAVK------RLSSQSGQGQEEFKNEIKLIAKLQHR--- 531
           K+G+G FG V   + + N +  AVK      + +  +       K E  ++ K+Q+    
Sbjct: 42  KMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSA-------KIEADILKKIQNDDIN 94

Query: 532 --NLVRLLGC-------CIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEG 582
             N+V+  G        C+  E             L   L++    N    G  +  I+ 
Sbjct: 95  NNNIVKYHGKFMYYDHMCLIFE------------PLGPSLYEIITRNNYN-GFHIEDIKL 141

Query: 583 IAQGLL----YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKR 638
               +L    YL    ++ + H DLK  NILLD     K          G      +TK 
Sbjct: 142 YCIEILKALNYLR---KMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKS 198

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 48.8 bits (117), Expect = 4e-06
 Identities = 55/240 (22%), Positives = 83/240 (34%), Gaps = 84/240 (35%)

Query: 482 KLGEGGFGPVYKG--RLLNGQEVAVK------RLSSQSGQGQEEFKNEIKLIAKLQHR-- 531
            LGEG FG V +       G+ VAVK      R    +       ++EI+++  L     
Sbjct: 21  TLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAA-------RSEIQVLEHLNTTDP 73

Query: 532 ----NLVRLLGC-------CIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRII 580
                 V++L         CI  E             L    +D  KEN      R+  I
Sbjct: 74  NSTFRCVQMLEWFEHHGHICIVFE------------LLGLSTYDFIKENGFL-PFRLDHI 120

Query: 581 EGIAQGLL----YLHQYSRLRVIHRDLKASNILLDKDMNP-------------------K 617
             +A  +     +LH     ++ H DLK  NIL  +                       K
Sbjct: 121 RKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIK 177

Query: 618 ISDFGMARIFGGDELQSKTKRIVGTYGYMSPE------YAQQGLFSIKSDVFSFGVLLLE 671
           + DFG A  +  +   +    +V T  Y +PE      +      S   DV+S G +L+E
Sbjct: 178 VVDFGSA-TYDDEHHST----LVSTRHYRAPEVILALGW------SQPCDVWSIGCILIE 226

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 109

 Score = 44.9 bits (106), Expect = 7e-06
 Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 2/58 (3%)

Query: 85  DSNAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGNLVVRDN--FSSNS 140
             +  LT+++ G+LV+ N    T+W S       N  A +   G LVV     F  + 
Sbjct: 48  GRDCKLTLTDYGELVIKNGDGSTVWKSGAQSVKGNYAAVVHPDGRLVVFGPSVFKIDP 105

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Length = 236

 Score = 44.1 bits (103), Expect = 6e-05
 Identities = 18/66 (27%), Positives = 24/66 (36%), Gaps = 2/66 (3%)

Query: 70  PDTIVWVANRNSPIFDSNAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGN 129
            D  VW  N         AVL     G++ +L   N  +W+S  SR     V  L    N
Sbjct: 167 RDDRVWSTNTAGKGTGCRAVLQ--PNGRMDVLTNQNIAVWTSGNSRSAGRYVFVLQPDRN 224

Query: 130 LVVRDN 135
           L +   
Sbjct: 225 LAIYGG 230

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	795
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
3m7h_A	276	Putidacin L1; monocot mannose-binding lectin, bact	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
1dlp_A	236	Lectin scafet precursor; two-domain lectin, beta p	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
3uqc_A	286	Probable conserved transmembrane protein; structur	100.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	100.0
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	100.0
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.95
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.92
4h3o_A	105	Lectin; cadmium, plant protein; 2.17A {Allium sati	99.89
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.88
3a0c_A	110	Mannose/sialic acid-binding lectin; beta-prism II,	99.87
1b2p_A	119	Protein (lectin); mannose-binding lectin, monocot,	99.87
2dpf_A	115	Curculin; sweet taste, taste modifying, plant prot	99.84
1xd5_A	112	Gastrodianin-1, antifungal protein GAFP-1; monocot	99.84
3dzw_A	109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	99.82
3r0e_B	110	Lectin; carbohydrate binding, carbohydrate, sugar	99.79
3mez_B	113	Mannose-specific lectin 3 chain 2; heterotetramer,	99.77
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.76
3r0e_A	109	Lectin; carbohydrate binding, carbohydrate, sugar	99.74
1xd5_A	112	Gastrodianin-1, antifungal protein GAFP-1; monocot	99.66
3a0c_A	110	Mannose/sialic acid-binding lectin; beta-prism II,	99.66
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.65
3mez_A	111	Mannose-specific lectin 3 chain 1; heterotetramer,	99.63
1b2p_A	119	Protein (lectin); mannose-binding lectin, monocot,	99.59
2dpf_A	115	Curculin; sweet taste, taste modifying, plant prot	99.59
3m7h_A	276	Putidacin L1; monocot mannose-binding lectin, bact	99.4
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.33
3mez_B	113	Mannose-specific lectin 3 chain 2; heterotetramer,	99.32
3mez_A	111	Mannose-specific lectin 3 chain 1; heterotetramer,	99.23
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.16
3r0e_B	110	Lectin; carbohydrate binding, carbohydrate, sugar	99.13
3dzw_A	109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	99.11
3r0e_A	109	Lectin; carbohydrate binding, carbohydrate, sugar	99.08
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.98
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.83
4h3o_A	105	Lectin; cadmium, plant protein; 2.17A {Allium sati	98.8
1dlp_A	236	Lectin scafet precursor; two-domain lectin, beta p	98.5
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.49
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.37
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.3
3ats_A	357	Putative uncharacterized protein; hypothetical pro	98.23
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	98.19
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.19
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	98.03
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	98.0
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.81
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	97.69
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	97.55
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	97.46
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	97.36
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	97.29
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	97.26
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	97.16
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	97.12
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	97.0
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	96.98
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	96.81
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	96.58
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	96.52
3mes_A	424	Choline kinase; malaria, structural genomics, stru	95.86
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	93.96
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	90.34

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=4.3e-53  Score=449.57  Aligned_cols=259  Identities=28%  Similarity=0.435  Sum_probs=214.7

Q ss_pred             cCCccccccCcCCcccEEEeEec------CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeE
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL------NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKIL  548 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  548 (795)
                      ++|.+.++||+|+||.||+|++.      +++.||||+++.......++|.+|+++|++++|||||+++++|.+.+..++
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l   92 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   92 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence            57889999999999999999853      467899999987766667889999999999999999999999999999999


Q ss_pred             EeecCCCCChhhhhhccC----------CcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeee
Q 003786          549 IYEYMPNKSLDFFLFDST----------KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKI  618 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL  618 (795)
                      |||||++|+|.++|....          ....+++..+..++.||++||.|||+++   ||||||||+||||++++.+||
T Consensus        93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDlKp~NILl~~~~~~Ki  169 (299)
T 4asz_A           93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKI  169 (299)
T ss_dssp             EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccCHhhEEECCCCcEEE
Confidence            999999999999996532          2356899999999999999999999988   999999999999999999999


Q ss_pred             eccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhc
Q 003786          619 SDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLW  697 (795)
Q Consensus       619 ~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~  697 (795)
                      +|||+++...............||+.|||||++.+..|+.++|||||||+||||+| |+.||.......  .....    
T Consensus       170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~--~~~~i----  243 (299)
T 4asz_A          170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE--VIECI----  243 (299)
T ss_dssp             CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH--HHHHH----
T ss_pred             CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHH----
Confidence            99999997655444344445679999999999999999999999999999999998 899987544222  11111    


Q ss_pred             cCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcccc
Q 003786          698 KDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKT  751 (795)
Q Consensus       698 ~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~  751 (795)
                      ..+..         ...+..++..+.+|+.+||+.||++|||++||+++|+...
T Consensus       244 ~~~~~---------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~  288 (299)
T 4asz_A          244 TQGRV---------LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLA  288 (299)
T ss_dssp             HHTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HcCCC---------CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            11111         1112234467889999999999999999999999998743

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=2.3e-52  Score=450.03  Aligned_cols=259  Identities=28%  Similarity=0.432  Sum_probs=207.0

Q ss_pred             cCCccccccCcCCcccEEEeEec------CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeE
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL------NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKIL  548 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  548 (795)
                      ++|.+.++||+|+||+||+|++.      +++.||||++........++|.+|+++|++++|||||+++++|.+.+..++
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l  120 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM  120 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            56788899999999999999853      478899999987766677889999999999999999999999999999999


Q ss_pred             EeecCCCCChhhhhhccCC------------cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCe
Q 003786          549 IYEYMPNKSLDFFLFDSTK------------ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNP  616 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~v  616 (795)
                      |||||++|+|.+++.....            ...+++.++..++.||++||+|||+++   ||||||||+||||++++.+
T Consensus       121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLKp~NILl~~~~~~  197 (329)
T 4aoj_A          121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVV  197 (329)
T ss_dssp             EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHhhEEECCCCcE
Confidence            9999999999999965432            246899999999999999999999988   9999999999999999999


Q ss_pred             eeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhh
Q 003786          617 KISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWD  695 (795)
Q Consensus       617 kL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~  695 (795)
                      ||+|||+++...............||+.|||||++.+..|+.++|||||||+||||+| |+.||.......  .....  
T Consensus       198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~--~~~~i--  273 (329)
T 4aoj_A          198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE--AIDCI--  273 (329)
T ss_dssp             EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHH--HHHHH--
T ss_pred             EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHH--HHHHH--
Confidence            9999999997655444444455789999999999999999999999999999999998 899987543221  11111  


Q ss_pred             hccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcccc
Q 003786          696 LWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKT  751 (795)
Q Consensus       696 ~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~  751 (795)
                        ..+..         .+.+..++..+.+|+.+||+.||++||||+||+++|+...
T Consensus       274 --~~g~~---------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~  318 (329)
T 4aoj_A          274 --TQGRE---------LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALA  318 (329)
T ss_dssp             --HHTCC---------CCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHH
T ss_pred             --HcCCC---------CCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHh
Confidence              11110         1112233457889999999999999999999999998743

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=1.4e-51  Score=437.98  Aligned_cols=264  Identities=26%  Similarity=0.409  Sum_probs=205.3

Q ss_pred             ccCCccccccCcCCcccEEEeEecCcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      .+++++.++||+|+||+||+|++.  ..||||+++...  ....+.|.+|+++|++++|||||++++++.+ +..++|||
T Consensus        35 ~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE  111 (307)
T 3omv_A           35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ  111 (307)
T ss_dssp             TTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence            367889999999999999999864  369999986432  3345789999999999999999999998764 56899999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      ||++|+|.++|...  ...+++..+..++.|||+||+|||+++   ||||||||+||||++++.+||+|||+|+......
T Consensus       112 y~~gGsL~~~l~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~---IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~  186 (307)
T 3omv_A          112 WCEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS  186 (307)
T ss_dssp             CCSSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCSSSEEEETTEEEEECCCSSCBC-----
T ss_pred             cCCCCCHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCccCHHHEEECCCCcEEEeeccCceecccCC
Confidence            99999999999543  345899999999999999999999988   9999999999999999999999999998765443


Q ss_pred             cccccccccccccccccccccc---CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCc
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQ---GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP  708 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~---~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~  708 (795)
                      ........+||+.|||||++.+   ..|+.++|||||||+||||++|+.||......... .........        .|
T Consensus       187 ~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~-~~~~~~~~~--------~p  257 (307)
T 3omv_A          187 GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQI-IFMVGRGYA--------SP  257 (307)
T ss_dssp             -------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH-HHHHHTTCC--------CC
T ss_pred             cceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHH-HHHHhcCCC--------CC
Confidence            3334456789999999999864   46999999999999999999999999754432221 111111111        11


Q ss_pred             cccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccccCCCC
Q 003786          709 TLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLP  755 (795)
Q Consensus       709 ~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~~~l~  755 (795)
                      .+ ...+..++..+.+|+.+||+.||++||||.||+++|+....++|
T Consensus       258 ~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lp  303 (307)
T 3omv_A          258 DL-SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP  303 (307)
T ss_dssp             CS-TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred             Cc-ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCC
Confidence            11 11222345678899999999999999999999999987655443

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=5.8e-52  Score=442.77  Aligned_cols=257  Identities=30%  Similarity=0.416  Sum_probs=212.0

Q ss_pred             cCCccccccCcCCcccEEEeEec------CcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceee
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL------NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKI  547 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  547 (795)
                      .++++.++||+|+||+||+|++.      +++.||||+++... ....++|.+|+.+|++++|||||+++++|.+.+..+
T Consensus        26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~  105 (308)
T 4gt4_A           26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS  105 (308)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence            45677899999999999999852      46789999997543 344578999999999999999999999999999999


Q ss_pred             EEeecCCCCChhhhhhccCC-------------cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCC
Q 003786          548 LIYEYMPNKSLDFFLFDSTK-------------ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDM  614 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~  614 (795)
                      +|||||++|+|.++|.....             ...+++..+..++.|||+||+|||+++   ||||||||+||||++++
T Consensus       106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~  182 (308)
T 4gt4_A          106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKL  182 (308)
T ss_dssp             EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGG
T ss_pred             EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCccccceEECCCC
Confidence            99999999999999964321             245899999999999999999999988   99999999999999999


Q ss_pred             CeeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhH
Q 003786          615 NPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHA  693 (795)
Q Consensus       615 ~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~  693 (795)
                      .+||+|||+++...............||+.|||||++.++.|+.++|||||||+||||+| |..||.......  .....
T Consensus       183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~--~~~~i  260 (308)
T 4gt4_A          183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD--VVEMI  260 (308)
T ss_dssp             CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHH--HHHHH
T ss_pred             CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHH--HHHHH
Confidence            999999999987654443344455789999999999999999999999999999999998 889987544222  12111


Q ss_pred             hhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          694 WDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       694 ~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                          ..+..         .+.+..++..+.+|+.+||+.||++||||+||+++|+.
T Consensus       261 ----~~~~~---------~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a  303 (308)
T 4gt4_A          261 ----RNRQV---------LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRA  303 (308)
T ss_dssp             ----HTTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred             ----HcCCC---------CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence                11111         11223345678899999999999999999999999975

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=3.1e-51  Score=439.54  Aligned_cols=267  Identities=22%  Similarity=0.228  Sum_probs=213.4

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      .+.|++.++||+|+||.||+|++. +|+.||||+++...     ...+|+.+|++++|||||++++++.+++..+|||||
T Consensus        57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~-----~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy  131 (336)
T 4g3f_A           57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-----FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL  131 (336)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-----CCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH-----hHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence            356888899999999999999865 58999999996542     224799999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCC-CeeeeccccccccCCCc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDM-NPKISDFGMARIFGGDE  631 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~-~vkL~DFGla~~~~~~~  631 (795)
                      |+||+|.+++..   .+.+++..+..++.||+.||+|||+++   ||||||||+||||+.+| ++||+|||+|+.+....
T Consensus       132 ~~gg~L~~~l~~---~~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~  205 (336)
T 4g3f_A          132 LEGGSLGQLIKQ---MGCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG  205 (336)
T ss_dssp             CTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEECTTSCCEEECCCTTCEEC----
T ss_pred             cCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCC
Confidence            999999999953   346999999999999999999999998   99999999999999998 69999999999765432


Q ss_pred             cc---ccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCc
Q 003786          632 LQ---SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP  708 (795)
Q Consensus       632 ~~---~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~  708 (795)
                      ..   ......+||+.|||||++.+..|+.++|||||||+||||++|+.||............ .    ......     
T Consensus       206 ~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i-~----~~~~~~-----  275 (336)
T 4g3f_A          206 LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKI-A----SEPPPI-----  275 (336)
T ss_dssp             --------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHH-H----HSCCGG-----
T ss_pred             cccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHH-H----cCCCCc-----
Confidence            21   1223468999999999999999999999999999999999999999765433321111 0    111100     


Q ss_pred             cccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc---cCCCCCCCCCCccc
Q 003786          709 TLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK---TINLPHPRQPAFSS  764 (795)
Q Consensus       709 ~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~---~~~l~~p~~p~~~~  764 (795)
                         ...+...+..+.++|.+||+.||++|||+.||+++|...   ...+.+|....+..
T Consensus       276 ---~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~~~  331 (336)
T 4g3f_A          276 ---REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEYKE  331 (336)
T ss_dssp             ---GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSCCC
T ss_pred             ---hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCCCC
Confidence               112223456778899999999999999999999987552   34577777665543

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=3.4e-51  Score=440.49  Aligned_cols=250  Identities=24%  Similarity=0.335  Sum_probs=210.6

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecC
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYM  553 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  553 (795)
                      ..|++.++||+|+||+||+|++. +|+.||||++........+.+.+|+++|++++|||||+++++|.+.+..|||||||
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  153 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  153 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence            56999999999999999999875 59999999998766666788999999999999999999999999999999999999


Q ss_pred             CCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccc
Q 003786          554 PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ  633 (795)
Q Consensus       554 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~  633 (795)
                      ++|+|.+++..    ..+++..+..++.||+.||.|||+++   ||||||||+||||+.+|.+||+|||+|+.+....  
T Consensus       154 ~gg~L~~~l~~----~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~--  224 (346)
T 4fih_A          154 EGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--  224 (346)
T ss_dssp             TTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSSS--
T ss_pred             CCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEECCCCCEEEecCcCceecCCCC--
Confidence            99999998843    34899999999999999999999998   9999999999999999999999999998765432  


Q ss_pred             ccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccch
Q 003786          634 SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNE  713 (795)
Q Consensus       634 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~  713 (795)
                      ......+||+.|||||++.+..|+.++|||||||++|||++|+.||...+...  .......    .     ..+.+  .
T Consensus       225 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~--~~~~i~~----~-----~~~~~--~  291 (346)
T 4fih_A          225 PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK--AMKMIRD----N-----LPPRL--K  291 (346)
T ss_dssp             CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHH----S-----SCCCC--S
T ss_pred             CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH--HHHHHHc----C-----CCCCC--C
Confidence            23345789999999999999999999999999999999999999997543221  1111111    0     00111  1


Q ss_pred             hhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          714 ASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       714 ~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .....+..+.+||.+||+.||++|||+.|+++|
T Consensus       292 ~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H  324 (346)
T 4fih_A          292 NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH  324 (346)
T ss_dssp             CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            112234567899999999999999999999985

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=2.1e-51  Score=442.80  Aligned_cols=252  Identities=22%  Similarity=0.338  Sum_probs=203.4

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      .++|+++++||+|+||+||+|++. +|+.||||++.+..  ....+.+.+|+++|++|+|||||++++++.+.+..|+||
T Consensus        23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm  102 (350)
T 4b9d_A           23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM  102 (350)
T ss_dssp             CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence            378999999999999999999864 59999999997542  334567999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      |||+||+|.++|... +...+++..+..++.||+.||.|||+++   ||||||||+||||+.+|.+||+|||+|+.....
T Consensus       103 Ey~~gg~L~~~i~~~-~~~~~~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~  178 (350)
T 4b9d_A          103 DYCEGGDLFKRINAQ-KGVLFQEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST  178 (350)
T ss_dssp             ECCTTCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---CEETTCCGGGEEECTTCCEEECSTTEESCCCHH
T ss_pred             eCCCCCcHHHHHHHc-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCCEEEcccccceeecCC
Confidence            999999999998543 3345788899999999999999999998   999999999999999999999999999876422


Q ss_pred             cccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccc
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL  710 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l  710 (795)
                      .  ......+||+.|||||++.+..|+.++|||||||+||||++|+.||...+....  ....   .. ....       
T Consensus       179 ~--~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~--~~~i---~~-~~~~-------  243 (350)
T 4b9d_A          179 V--ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNL--VLKI---IS-GSFP-------  243 (350)
T ss_dssp             H--HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHH---HH-TCCC-------
T ss_pred             c--ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH--HHHH---Hc-CCCC-------
Confidence            1  223456899999999999999999999999999999999999999976542221  1111   01 1100       


Q ss_pred             cchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       711 ~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                        ..+...+..+.+||.+||+.||++|||+.|++++
T Consensus       244 --~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h  277 (350)
T 4b9d_A          244 --PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK  277 (350)
T ss_dssp             --CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             --CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence              1112234567899999999999999999999985

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=2.2e-51  Score=435.47  Aligned_cols=249  Identities=24%  Similarity=0.319  Sum_probs=209.9

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEeccc---CccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQ---SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      ++|++.+.||+|+||+||+|++. +++.||||++.+.   .....+.+.+|+++|++++|||||++++++.+.+..|+||
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm  111 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL  111 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            67999999999999999999864 5899999999754   2344578999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      |||+||+|.+++..   .+.+++..+..++.||+.||.|||+++   |+||||||+||||+.++.+||+|||+|+.+...
T Consensus       112 Ey~~gG~L~~~i~~---~~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~  185 (311)
T 4aw0_A          112 SYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE  185 (311)
T ss_dssp             CCCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             ecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEEcCCCCEEEEEcCCceecCCC
Confidence            99999999999943   356999999999999999999999998   999999999999999999999999999987654


Q ss_pred             cccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccc
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL  710 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l  710 (795)
                      .........+||+.|||||++.+..|+.++|||||||++|||++|+.||...+....  ......  ....        +
T Consensus       186 ~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~--~~~i~~--~~~~--------~  253 (311)
T 4aw0_A          186 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLI--FAKIIK--LEYD--------F  253 (311)
T ss_dssp             TTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHH--TCCC--------C
T ss_pred             CCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHc--CCCC--------C
Confidence            444455668999999999999999999999999999999999999999975442221  111100  0001        1


Q ss_pred             cchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 003786          711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVS  745 (795)
Q Consensus       711 ~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  745 (795)
                          +.....++.++|.+||+.||++|||++|++.
T Consensus       254 ----p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~  284 (311)
T 4aw0_A          254 ----PEKFFPKARDLVEKLLVLDATKRLGCEEMEG  284 (311)
T ss_dssp             ----CTTCCHHHHHHHHHHSCSSGGGSTTSGGGTC
T ss_pred             ----CcccCHHHHHHHHHHccCCHhHCcChHHHcC
Confidence                1122346788999999999999999998743

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=5.4e-50  Score=441.61  Aligned_cols=250  Identities=24%  Similarity=0.329  Sum_probs=210.5

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecC
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYM  553 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  553 (795)
                      +.|++.++||+|+||.||+|++. +|+.||||++........+.+.+|+.+|++++|||||+++++|.+.+..|||||||
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~  230 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  230 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence            57999999999999999999875 59999999998776667788999999999999999999999999999999999999


Q ss_pred             CCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccc
Q 003786          554 PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ  633 (795)
Q Consensus       554 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~  633 (795)
                      +||+|.+++..    ..+++..+..++.||+.||.|||+++   ||||||||+||||+.+|.+||+|||+|+.+....  
T Consensus       231 ~gG~L~~~i~~----~~l~e~~~~~~~~qil~aL~ylH~~~---IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~--  301 (423)
T 4fie_A          231 EGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--  301 (423)
T ss_dssp             TTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSTTTEEECTTCCEEECCCTTCEECCSSC--
T ss_pred             CCCcHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEecCccceECCCCC--
Confidence            99999998843    34899999999999999999999998   9999999999999999999999999998765432  


Q ss_pred             ccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccch
Q 003786          634 SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNE  713 (795)
Q Consensus       634 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~  713 (795)
                      ......+||+.|||||++.+..|+.++|||||||++|||++|+.||.......  .......    ..     .+.+.  
T Consensus       302 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~--~~~~i~~----~~-----~~~~~--  368 (423)
T 4fie_A          302 PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK--AMKMIRD----NL-----PPRLK--  368 (423)
T ss_dssp             CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHH----SC-----CCCCS--
T ss_pred             ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH--HHHHHHc----CC-----CCCCc--
Confidence            23345789999999999999999999999999999999999999996543221  1111111    00     01110  


Q ss_pred             hhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          714 ASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       714 ~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ........+.+||.+||+.||++|||+.|+++|
T Consensus       369 ~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H  401 (423)
T 4fie_A          369 NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH  401 (423)
T ss_dssp             CTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            111234567889999999999999999999985

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=7.5e-50  Score=421.65  Aligned_cols=248  Identities=23%  Similarity=0.369  Sum_probs=198.3

Q ss_pred             CccccccCcCCcccEEEeEec-CcceEEEEEeccc--CccchHHHHHHHHHHHhcCCcccceeeeeeee----cceeeEE
Q 003786          477 FSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQ--SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIE----LEEKILI  549 (795)
Q Consensus       477 ~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv  549 (795)
                      |++.++||+|+||+||+|++. +++.||||++...  .....+.|.+|+++|++++|||||+++++|.+    ....++|
T Consensus        28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv  107 (290)
T 3fpq_A           28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV  107 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence            367788999999999999865 5889999999654  23345679999999999999999999999875    3557999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEEC-CCCCeeeeccccccccC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLD-KDMNPKISDFGMARIFG  628 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~-~~~~vkL~DFGla~~~~  628 (795)
                      ||||++|+|.+++..   ...+++..+..++.||+.||+|||+++ .+||||||||+||||+ .++.+||+|||+|+...
T Consensus       108 mEy~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~  183 (290)
T 3fpq_A          108 TELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR  183 (290)
T ss_dssp             EECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred             EeCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence            999999999999953   356899999999999999999999875 3599999999999998 48999999999998644


Q ss_pred             CCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCc
Q 003786          629 GDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP  708 (795)
Q Consensus       629 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~  708 (795)
                      ..    .....+||+.|||||++.+ .|+.++|||||||+||||++|+.||........ +....    ..+....    
T Consensus       184 ~~----~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~-~~~~i----~~~~~~~----  249 (290)
T 3fpq_A          184 AS----FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ-IYRRV----TSGVKPA----  249 (290)
T ss_dssp             TT----SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH-HHHHH----TTTCCCG----
T ss_pred             CC----ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHH-HHHHH----HcCCCCC----
Confidence            32    2345789999999998875 699999999999999999999999965432221 11111    1111100    


Q ss_pred             cccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          709 TLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       709 ~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                          ..+...+.++.++|.+||+.||++|||++|+++|
T Consensus       250 ----~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H  283 (290)
T 3fpq_A          250 ----SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH  283 (290)
T ss_dssp             ----GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             ----CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                1111123457789999999999999999999985

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=1.9e-49  Score=415.00  Aligned_cols=247  Identities=25%  Similarity=0.384  Sum_probs=190.9

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      .++|++.+.||+|+||+||+|++. +|+.||||++.+..   ....+.+.+|+++|++++|||||++++++.+.+..++|
T Consensus        12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv   91 (275)
T 3hyh_A           12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV   91 (275)
T ss_dssp             --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence            368999999999999999999864 69999999997542   23456799999999999999999999999999999999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      |||+ +|+|.+++..   .+.+++..+..++.||+.||+|||+++   |+||||||+||||+.++.+||+|||+|+....
T Consensus        92 mEy~-~g~L~~~l~~---~~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~  164 (275)
T 3hyh_A           92 IEYA-GNELFDYIVQ---RDKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTD  164 (275)
T ss_dssp             EECC-CEEHHHHHHH---SCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTCCEEECCSSCC-----
T ss_pred             EeCC-CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCChHHeEECCCCCEEEeecCCCeecCC
Confidence            9999 6788888843   346999999999999999999999998   99999999999999999999999999987643


Q ss_pred             CcccccccccccccccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCc
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQGLF-SIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP  708 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~~~~-~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~  708 (795)
                      ..   .....+||+.|||||++.+..| +.++|||||||++|||++|+.||...+...  +......    ...      
T Consensus       165 ~~---~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~--~~~~i~~----~~~------  229 (275)
T 3hyh_A          165 GN---FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV--LFKNISN----GVY------  229 (275)
T ss_dssp             -------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHH----TCC------
T ss_pred             CC---ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHH--HHHHHHc----CCC------
Confidence            32   2345789999999999998776 589999999999999999999997543221  1111111    100      


Q ss_pred             cccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          709 TLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       709 ~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .    .+...+..+.+++.+||+.||++|||++|+++|
T Consensus       230 ~----~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  263 (275)
T 3hyh_A          230 T----LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD  263 (275)
T ss_dssp             C----CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred             C----CCCCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence            0    111233567889999999999999999999985

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=6e-50  Score=424.43  Aligned_cols=248  Identities=24%  Similarity=0.297  Sum_probs=197.9

Q ss_pred             cCCccccccCcCCcccEEEeEec----CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeE
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL----NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKIL  548 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  548 (795)
                      ++|++.+.||+|+||+||+|+..    +++.||||++.+..  .....++.+|+++|++++|||||++++++.+++..++
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i  103 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL  103 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            57999999999999999999753    46789999997542  2334578899999999999999999999999999999


Q ss_pred             EeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccC
Q 003786          549 IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      |||||+||+|.+++..   .+.+++..+..++.||+.||.|||+++   |+||||||+|||++.+|.+||+|||+|+...
T Consensus       104 vmEy~~gg~L~~~l~~---~~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~  177 (304)
T 3ubd_A          104 ILDFLRGGDLFTRLSK---EVMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESI  177 (304)
T ss_dssp             EECCCTTCEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTSCEEEESSEEEEC--
T ss_pred             EEEcCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHeEEcCCCCEEecccccceecc
Confidence            9999999999999943   356899999999999999999999998   9999999999999999999999999998653


Q ss_pred             CCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCc
Q 003786          629 GDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP  708 (795)
Q Consensus       629 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~  708 (795)
                      ...  ......+||+.|||||++.+..|+.++|||||||+||||++|+.||...+....  .....   . ...      
T Consensus       178 ~~~--~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~--~~~i~---~-~~~------  243 (304)
T 3ubd_A          178 DHE--KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKET--MTMIL---K-AKL------  243 (304)
T ss_dssp             -----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHH---H-CCC------
T ss_pred             CCC--ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHH--HHHHH---c-CCC------
Confidence            322  233457899999999999999999999999999999999999999976443221  11110   0 000      


Q ss_pred             cccchhhHHHHHHHHHHHHhhccCCCCCCCCH-----HHHHHH
Q 003786          709 TLQNEASYLILNRYINVGLLCVQEDAADRPTM-----FEVVSM  746 (795)
Q Consensus       709 ~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~-----~evl~~  746 (795)
                      .    .+...+..+.+++.+||+.||++|||+     +|+++|
T Consensus       244 ~----~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H  282 (304)
T 3ubd_A          244 G----MPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH  282 (304)
T ss_dssp             C----CCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred             C----CCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence            0    111234567889999999999999984     678764

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=1.2e-49  Score=432.31  Aligned_cols=260  Identities=28%  Similarity=0.390  Sum_probs=211.6

Q ss_pred             HccCCccccccCcCCcccEEEeEecC------cceEEEEEecccCc-cchHHHHHHHHHHHhcCC-cccceeeeeeeec-
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLLN------GQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQH-RNLVRLLGCCIEL-  543 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~-  543 (795)
                      ..++|++.++||+|+||+||+|++..      ++.||||++..... ...+.|.+|+++|.++.| ||||+++++|.+. 
T Consensus        62 ~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~  141 (353)
T 4ase_A           62 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG  141 (353)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred             cHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecC
Confidence            45789999999999999999997532      46799999976433 335679999999999965 9999999998765 


Q ss_pred             ceeeEEeecCCCCChhhhhhccCC-------------cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEE
Q 003786          544 EEKILIYEYMPNKSLDFFLFDSTK-------------ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILL  610 (795)
Q Consensus       544 ~~~~lv~E~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll  610 (795)
                      +..++|||||++|+|.++|.....             ...+++..+..++.|||+||.|||+++   ||||||||+||||
T Consensus       142 ~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~---iiHRDLK~~NILl  218 (353)
T 4ase_A          142 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILL  218 (353)
T ss_dssp             SCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEE
T ss_pred             CEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC---eecCccCccceee
Confidence            568999999999999999965332             345889999999999999999999998   9999999999999


Q ss_pred             CCCCCeeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhH
Q 003786          611 DKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTL  689 (795)
Q Consensus       611 ~~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~  689 (795)
                      ++++.+||+|||+|+...............||+.|||||++.+..|+.++|||||||+||||+| |+.||........ +
T Consensus       219 ~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~-~  297 (353)
T 4ase_A          219 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-F  297 (353)
T ss_dssp             CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH-H
T ss_pred             CCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHH-H
Confidence            9999999999999997755444344556789999999999999999999999999999999998 8999976543322 1


Q ss_pred             hHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          690 LGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       690 ~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      ....    ..+..         ...+...+.++.+++.+||+.||++|||+.||+++|+.
T Consensus       298 ~~~i----~~g~~---------~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~  344 (353)
T 4ase_A          298 CRRL----KEGTR---------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN  344 (353)
T ss_dssp             HHHH----HHTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHH----HcCCC---------CCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHH
Confidence            1111    11111         11122234578899999999999999999999999876

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=9.6e-49  Score=418.56  Aligned_cols=270  Identities=23%  Similarity=0.299  Sum_probs=200.2

Q ss_pred             cCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecc----eeeEEe
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELE----EKILIY  550 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~lv~  550 (795)
                      .+|.+.++||+|+||+||+|++ +|+.||||++.... .....+..|+..+.+++|||||++++++.+++    ..+|||
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~-~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~   80 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE-ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS   80 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc-hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence            4578889999999999999987 68999999996542 11222345666667899999999999998764    579999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcC-----CCcEEeccCCCCcEEECCCCCeeeecccccc
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS-----RLRVIHRDLKASNILLDKDMNPKISDFGMAR  625 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-----~~~iiHrDikp~NIll~~~~~vkL~DFGla~  625 (795)
                      |||++|+|.+++..    ..++++.+.+++.|+++||+|||++.     ..+||||||||+||||+.++.+||+|||+++
T Consensus        81 Ey~~~gsL~~~l~~----~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~  156 (303)
T 3hmm_A           81 DYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV  156 (303)
T ss_dssp             ECCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             cCCCCCcHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCc
Confidence            99999999999953    34889999999999999999999861     2359999999999999999999999999998


Q ss_pred             ccCCCccc--ccccccccccccccccccccC------CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhH----
Q 003786          626 IFGGDELQ--SKTKRIVGTYGYMSPEYAQQG------LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHA----  693 (795)
Q Consensus       626 ~~~~~~~~--~~~~~~~gt~~y~APE~~~~~------~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~----  693 (795)
                      ........  ......+||+.|||||++.+.      .|+.++|||||||+||||++|.+|+.........+....    
T Consensus       157 ~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~  236 (303)
T 3hmm_A          157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP  236 (303)
T ss_dssp             EEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred             cccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccc
Confidence            76433221  223346899999999998754      478899999999999999999887754432221111000    


Q ss_pred             -hhhccCcccccccCccccch-hhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          694 -WDLWKDDRAWELIDPTLQNE-ASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       694 -~~~~~~~~~~~~id~~l~~~-~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                       ............++|.+... ........+.+|+.+||+.||++||||.||+++|+..
T Consensus       237 ~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l  295 (303)
T 3hmm_A          237 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL  295 (303)
T ss_dssp             CHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHH
T ss_pred             hHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHH
Confidence             00000000111122322221 2234567788999999999999999999999999763

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=3.3e-48  Score=412.54  Aligned_cols=252  Identities=25%  Similarity=0.352  Sum_probs=190.4

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccCc-cchHHHHHHHHHHHhcCCcccceeeeeeeecc--------
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELE--------  544 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--------  544 (795)
                      ++|++.+.||+|+||+||+|+.. +|+.||||++..... ...+.+.+|+++|++++|||||++++++.+.+        
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            46999999999999999999864 689999999965433 34467899999999999999999999987655        


Q ss_pred             ----eeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeec
Q 003786          545 ----EKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISD  620 (795)
Q Consensus       545 ----~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~D  620 (795)
                          ..++|||||++|+|.+++.........++..+..++.||++||+|||+++   ||||||||+||||+.++.+||+|
T Consensus        85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~---IiHRDlKp~NILl~~~~~vKl~D  161 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGD  161 (299)
T ss_dssp             --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC
T ss_pred             CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc---CccccCcHHHeEECCCCcEEEcc
Confidence                36899999999999999965544445566678899999999999999998   99999999999999999999999


Q ss_pred             cccccccCCCccc----------ccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHh
Q 003786          621 FGMARIFGGDELQ----------SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL  690 (795)
Q Consensus       621 FGla~~~~~~~~~----------~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~  690 (795)
                      ||+|+........          ......+||+.|||||++.+..|+.++|||||||++|||++   ||..... .....
T Consensus       162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~-~~~~~  237 (299)
T 4g31_A          162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME-RVRTL  237 (299)
T ss_dssp             CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH-HHHHH
T ss_pred             CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH-HHHHH
Confidence            9999876543221          12234579999999999999999999999999999999996   5532111 00111


Q ss_pred             HhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          691 GHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       691 ~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ..    .....         .............+++.+||+.||++|||+.|++++
T Consensus       238 ~~----~~~~~---------~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h  280 (299)
T 4g31_A          238 TD----VRNLK---------FPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN  280 (299)
T ss_dssp             HH----HHTTC---------CCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             HH----HhcCC---------CCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            00    00111         011222333456789999999999999999999985

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=5.3e-46  Score=410.66  Aligned_cols=266  Identities=20%  Similarity=0.248  Sum_probs=202.4

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeee------cc
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIE------LE  544 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~  544 (795)
                      .++|+++++||+|+||+||+|++. +|+.||||++.+..  ....+.+.+|+++|++++|||||++++++..      .+
T Consensus        53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~  132 (398)
T 4b99_A           53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK  132 (398)
T ss_dssp             CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred             CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence            367999999999999999999864 69999999997543  2334678899999999999999999998764      36


Q ss_pred             eeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccc
Q 003786          545 EKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMA  624 (795)
Q Consensus       545 ~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla  624 (795)
                      ..|+|||||+ |+|.+++.   +.+.+++..+..++.||+.||.|||+++   ||||||||+|||++.++.+||+|||++
T Consensus       133 ~~~ivmE~~~-g~L~~~i~---~~~~l~~~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NIl~~~~~~~Ki~DFGla  205 (398)
T 4b99_A          133 SVYVVLDLME-SDLHQIIH---SSQPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMA  205 (398)
T ss_dssp             CEEEEEECCS-EEHHHHHT---SSSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             EEEEEEeCCC-CCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCc---CcCCCcCccccccCCCCCEEEeeccee
Confidence            7899999996 67888884   3456999999999999999999999998   999999999999999999999999999


Q ss_pred             cccCCCc--ccccccccccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcc
Q 003786          625 RIFGGDE--LQSKTKRIVGTYGYMSPEYAQQG-LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDR  701 (795)
Q Consensus       625 ~~~~~~~--~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~  701 (795)
                      +.+....  ........+||+.|||||++.+. .|+.++||||+||++|||++|++||...+..................
T Consensus       206 ~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~  285 (398)
T 4b99_A          206 RGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPA  285 (398)
T ss_dssp             BCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGG
T ss_pred             eecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChH
Confidence            8764322  12234457899999999998774 67999999999999999999999997655322211110000000000


Q ss_pred             cccc------------cCcccc---chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          702 AWEL------------IDPTLQ---NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       702 ~~~~------------id~~l~---~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ....            +.+...   ..........+.+|+.+||+.||++|||+.|+++|
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  345 (398)
T 4b99_A          286 VIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH  345 (398)
T ss_dssp             GTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             HhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence            0000            000000   00111234567899999999999999999999986

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=1.4e-45  Score=402.95  Aligned_cols=265  Identities=20%  Similarity=0.264  Sum_probs=201.0

Q ss_pred             HHHccCCccccccCcCCcccEEEeEec----CcceEEEEEecccCccchHHHHHHHHHHHhc-CCcccceeeeeeeecce
Q 003786          471 SAATANFSTENKLGEGGFGPVYKGRLL----NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEE  545 (795)
Q Consensus       471 ~~~~~~~~~~~~LG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~  545 (795)
                      ....++|++.++||+|+||+||+|+.+    +++.||||++.+.  ....++.+|+++|+.+ +|||||++++++.+.++
T Consensus        17 p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~--~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~   94 (361)
T 4f9c_A           17 PQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT--SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDH   94 (361)
T ss_dssp             GGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT--SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTE
T ss_pred             CCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc--cCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCE
Confidence            345678999999999999999999753    4788999998654  3456788999999998 69999999999999999


Q ss_pred             eeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCC-CCeeeeccccc
Q 003786          546 KILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKD-MNPKISDFGMA  624 (795)
Q Consensus       546 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~-~~vkL~DFGla  624 (795)
                      .++|||||++|+|.+++.      .+++.++..++.||+.||+|||+++   |+||||||+|||++.+ +.+||+|||+|
T Consensus        95 ~~lvmE~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~~g---IiHRDiKPeNiLl~~~~~~~kl~DFGla  165 (361)
T 4f9c_A           95 VVIAMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFGLA  165 (361)
T ss_dssp             EEEEEECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred             EEEEEeCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCcCCHHHeEEeCCCCeEEECcCCCC
Confidence            999999999999999882      3889999999999999999999998   9999999999999877 79999999999


Q ss_pred             cccCCCccc--------------------------ccccccccccccccccccccC-CCCcccchhhHHHHHHHHHhCCC
Q 003786          625 RIFGGDELQ--------------------------SKTKRIVGTYGYMSPEYAQQG-LFSIKSDVFSFGVLLLETLSSKR  677 (795)
Q Consensus       625 ~~~~~~~~~--------------------------~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~  677 (795)
                      +........                          ......+||+.|||||++.+. .|+.++||||+||++|||++|+.
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~  245 (361)
T 4f9c_A          166 QGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRY  245 (361)
T ss_dssp             EECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCS
T ss_pred             cccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCC
Confidence            865432110                          112345799999999998775 58999999999999999999999


Q ss_pred             CCCCCCCcchhHhHhHhhh-----------ccC-----c-----cccc---------ccCcccc---------chhhHHH
Q 003786          678 NTDFSNTNSLTLLGHAWDL-----------WKD-----D-----RAWE---------LIDPTLQ---------NEASYLI  718 (795)
Q Consensus       678 p~~~~~~~~~~~~~~~~~~-----------~~~-----~-----~~~~---------~id~~l~---------~~~~~~~  718 (795)
                      ||.........+.......           ...     .     ....         ...+.+.         .+.....
T Consensus       246 Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~i  325 (361)
T 4f9c_A          246 PFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEV  325 (361)
T ss_dssp             SSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTC
T ss_pred             CCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccC
Confidence            9965443222111110000           000     0     0000         0000000         0001123


Q ss_pred             HHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          719 LNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       719 ~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      +..+.+|+.+||+.||++|||++|+++|
T Consensus       326 s~~a~DLl~~lL~~dP~~R~ta~eaL~H  353 (361)
T 4f9c_A          326 PDEAYDLLDKLLDLNPASRITAEEALLH  353 (361)
T ss_dssp             CHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred             CHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence            3567899999999999999999999985

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=8.2e-45  Score=417.59  Aligned_cols=266  Identities=26%  Similarity=0.305  Sum_probs=209.9

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHH---HHHHHhcCCcccceeeeeeeeccee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNE---IKLIAKLQHRNLVRLLGCCIELEEK  546 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E---~~~l~~l~h~niv~l~~~~~~~~~~  546 (795)
                      .++|++.+.||+|+||.||+|++. +|+.||||++.+..   ......+.+|   +.+++.++|||||+++++|.+.+.+
T Consensus       188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l  267 (689)
T 3v5w_A          188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL  267 (689)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred             hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence            478999999999999999999875 59999999996532   2233334444   5666777999999999999999999


Q ss_pred             eEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          547 ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                      |||||||+||+|..+|..   .+.+++..+..++.||+.||.|||+++   ||||||||+||||+.+|++||+|||+|+.
T Consensus       268 ylVmEy~~GGdL~~~l~~---~~~l~E~~a~~y~~qIl~aL~yLH~~g---IiHRDLKPeNILld~~G~vKL~DFGlA~~  341 (689)
T 3v5w_A          268 SFILDLMNGGDLHYHLSQ---HGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACD  341 (689)
T ss_dssp             EEEECCCCSCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             EEEEecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHeEEeCCCCEEecccceeee
Confidence            999999999999999953   456999999999999999999999998   99999999999999999999999999987


Q ss_pred             cCCCccccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccc
Q 003786          627 FGGDELQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWEL  705 (795)
Q Consensus       627 ~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  705 (795)
                      +....    ....+||+.|||||++.+ ..|+.++|||||||+||||++|++||..........+... .......    
T Consensus       342 ~~~~~----~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~-i~~~~~~----  412 (689)
T 3v5w_A          342 FSKKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM-TLTMAVE----  412 (689)
T ss_dssp             CSSCC----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHH-HHHCCCC----
T ss_pred             cCCCC----CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh-hcCCCCC----
Confidence            65432    345789999999999965 5899999999999999999999999975443322111111 0001111    


Q ss_pred             cCccccchhhHHHHHHHHHHHHhhccCCCCCCCC-----HHHHHHHHccc--------cCCCCCCCCCCc
Q 003786          706 IDPTLQNEASYLILNRYINVGLLCVQEDAADRPT-----MFEVVSMLTNK--------TINLPHPRQPAF  762 (795)
Q Consensus       706 id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt-----~~evl~~L~~~--------~~~l~~p~~p~~  762 (795)
                              .+...+..+.+||.+||+.||++|++     ++||++|-=..        ...+++|..|..
T Consensus       413 --------~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~idW~~l~~~~~~pP~~P~~  474 (689)
T 3v5w_A          413 --------LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPR  474 (689)
T ss_dssp             --------CCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCCHHHHHTTCSCCSCCCCT
T ss_pred             --------CCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCCCHHHHHcCCCCcCccCCC
Confidence                    11223456789999999999999998     78998863211        234566777754

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=1.3e-44  Score=418.81  Aligned_cols=253  Identities=24%  Similarity=0.310  Sum_probs=211.0

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      .++|++.+.||+|+||.||+|++. +|+.||||++........+.+.+|+++|+.++|||||+++++|.+....++||||
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~  235 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF  235 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence            368999999999999999999865 5999999999776656677899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCC--CCeeeeccccccccCCC
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKD--MNPKISDFGMARIFGGD  630 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~--~~vkL~DFGla~~~~~~  630 (795)
                      |+||+|.+++..  +...+++..+..++.||+.||.|||+++   |+||||||+|||++.+  +.+||+|||+++.+...
T Consensus       236 ~~gg~L~~~i~~--~~~~l~e~~~~~~~~qi~~al~ylH~~~---iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~  310 (573)
T 3uto_A          236 MSGGELFEKVAD--EHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK  310 (573)
T ss_dssp             CCCCBHHHHHTC--TTSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT
T ss_pred             cCCCcHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhccccCCCCCCEEEeeccceeEccCC
Confidence            999999988843  2346899999999999999999999998   9999999999999854  89999999999987544


Q ss_pred             cccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccc
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL  710 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l  710 (795)
                      .   .....+||+.|||||++.+..|+.++|||||||++|||++|+.||...+....  +....   . .      +..+
T Consensus       311 ~---~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~--~~~i~---~-~------~~~~  375 (573)
T 3uto_A          311 Q---SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET--LRNVK---S-C------DWNM  375 (573)
T ss_dssp             S---EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH--HHHHH---T-T------CCCC
T ss_pred             C---ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH--HHHHH---h-C------CCCC
Confidence            3   23456899999999999999999999999999999999999999976443222  11110   0 0      0011


Q ss_pred             cchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       711 ~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ...........+.+||.+||+.||++|||+.|+++|
T Consensus       376 ~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H  411 (573)
T 3uto_A          376 DDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH  411 (573)
T ss_dssp             CSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             CcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            111222234567899999999999999999999996

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=5.4e-44  Score=386.11  Aligned_cols=280  Identities=37%  Similarity=0.600  Sum_probs=236.8

Q ss_pred             HhHHHHccCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceee
Q 003786          468 ASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKI  547 (795)
Q Consensus       468 ~~i~~~~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  547 (795)
                      .++...+++|++.+.||+|+||.||+|++.+++.||||++........+.+.+|++++++++||||+++++++.+.+..+
T Consensus        32 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  111 (321)
T 2qkw_B           32 VDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMI  111 (321)
T ss_dssp             SCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCE
T ss_pred             HHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEE
Confidence            34455778999999999999999999998889999999998766666788999999999999999999999999999999


Q ss_pred             EEeecCCCCChhhhhhccCC-cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          548 LIYEYMPNKSLDFFLFDSTK-ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                      +||||+++++|.+++..... ...+++..+..++.||++||.|||+++   |+||||||+||+++.++.+||+|||+++.
T Consensus       112 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~  188 (321)
T 2qkw_B          112 LIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKK  188 (321)
T ss_dssp             EEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCSTTEEECTTCCEEECCCTTCEE
T ss_pred             EEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC---eecCCCCHHHEEECCCCCEEEeecccccc
Confidence            99999999999999865432 235889999999999999999999988   99999999999999999999999999987


Q ss_pred             cCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcc-hhHhHhHhhhccCcccccc
Q 003786          627 FGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNS-LTLLGHAWDLWKDDRAWEL  705 (795)
Q Consensus       627 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~  705 (795)
                      ..............||+.|+|||++.+..++.++|||||||++|||++|+.||....... .....+.............
T Consensus       189 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (321)
T 2qkw_B          189 GTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQI  268 (321)
T ss_dssp             CSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSS
T ss_pred             cccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHh
Confidence            543332233344568999999999998999999999999999999999999997654322 2233333333344555566


Q ss_pred             cCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          706 IDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       706 id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                      +++.+...........+.+++.+||+.||++|||+.||+++|+..
T Consensus       269 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~  313 (321)
T 2qkw_B          269 VDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYA  313 (321)
T ss_dssp             SSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence            677776677788889999999999999999999999999999763

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=1.7e-43  Score=382.90  Aligned_cols=288  Identities=41%  Similarity=0.681  Sum_probs=242.2

Q ss_pred             CCcccHHhHHHHccCCccccccCcCCcccEEEeEecCcceEEEEEecccCc-cchHHHHHHHHHHHhcCCcccceeeeee
Q 003786          462 FPMFSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRLLGCC  540 (795)
Q Consensus       462 ~~~~~~~~i~~~~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~  540 (795)
                      +..+++.++....++|++.+.||+|+||.||+|+..+++.||||++..... .....+.+|++++++++||||+++++++
T Consensus        17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   96 (326)
T 3uim_A           17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC   96 (326)
T ss_dssp             CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred             cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence            456888999999999999999999999999999988899999999976432 2344789999999999999999999999


Q ss_pred             eecceeeEEeecCCCCChhhhhhccCC-cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeee
Q 003786          541 IELEEKILIYEYMPNKSLDFFLFDSTK-ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKIS  619 (795)
Q Consensus       541 ~~~~~~~lv~E~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~  619 (795)
                      .+.+..++||||+++++|.+++..... ...+++..+..++.||+.||.|||++...+|+||||||+|||++.++.+||+
T Consensus        97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~  176 (326)
T 3uim_A           97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG  176 (326)
T ss_dssp             CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEEC
T ss_pred             ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEec
Confidence            999999999999999999999965443 3458999999999999999999999922239999999999999999999999


Q ss_pred             ccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCC---CCcchhHhHhHhhh
Q 003786          620 DFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFS---NTNSLTLLGHAWDL  696 (795)
Q Consensus       620 DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~---~~~~~~~~~~~~~~  696 (795)
                      |||++........ .......||+.|+|||++.+..++.++|||||||++|+|++|+.||+..   .........+....
T Consensus       177 Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~  255 (326)
T 3uim_A          177 DFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL  255 (326)
T ss_dssp             CCSSCEECCSSSS-CEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTT
T ss_pred             cCccccccCcccc-cccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHH
Confidence            9999987653332 2233456999999999999889999999999999999999999999632   22233334444455


Q ss_pred             ccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          697 WKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       697 ~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                      ..........+..+...........+.+++.+||+.||++|||+.||+++|++.
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~  309 (326)
T 3uim_A          256 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD  309 (326)
T ss_dssp             TSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred             hhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence            555666667777777777888889999999999999999999999999999874

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=1.8e-41  Score=363.66  Aligned_cols=284  Identities=38%  Similarity=0.549  Sum_probs=229.3

Q ss_pred             CCCcccHHhHHHHccCCccc------cccCcCCcccEEEeEecCcceEEEEEecccC----ccchHHHHHHHHHHHhcCC
Q 003786          461 WFPMFSLASVSAATANFSTE------NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQS----GQGQEEFKNEIKLIAKLQH  530 (795)
Q Consensus       461 ~~~~~~~~~i~~~~~~~~~~------~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h  530 (795)
                      .++.|++.++...+.+|...      ++||+|+||.||+|+. +++.||||++....    ....+.+.+|+.++++++|
T Consensus        11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h   89 (307)
T 2nru_A           11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH   89 (307)
T ss_dssp             CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred             CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence            34668888888888888776      8999999999999987 68899999986532    2335678999999999999


Q ss_pred             cccceeeeeeeecceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEE
Q 003786          531 RNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILL  610 (795)
Q Consensus       531 ~niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll  610 (795)
                      |||+++++++.+.+..++||||+++++|.+++........+++..+..++.||++||.|||+++   |+||||||+||++
T Consensus        90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nili  166 (307)
T 2nru_A           90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILL  166 (307)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEE
T ss_pred             CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEE
Confidence            9999999999999999999999999999999876555567899999999999999999999998   9999999999999


Q ss_pred             CCCCCeeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHh
Q 003786          611 DKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL  690 (795)
Q Consensus       611 ~~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~  690 (795)
                      +.++.+||+|||++................||+.|+|||.+.+ .++.++||||||+++|+|++|..|+...........
T Consensus       167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~  245 (307)
T 2nru_A          167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLD  245 (307)
T ss_dssp             CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTH
T ss_pred             cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHH
Confidence            9999999999999987654332333344679999999998865 588999999999999999999999976553322111


Q ss_pred             HhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          691 GHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       691 ~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                      ...............+++.+ ..........+.+++.+||+.+|++||++.+|+++|+..
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l  304 (307)
T 2nru_A          246 IKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM  304 (307)
T ss_dssp             HHHHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             HHHHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence            10101111122233334333 234556778899999999999999999999999999864

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=7.1e-42  Score=365.39  Aligned_cols=253  Identities=26%  Similarity=0.374  Sum_probs=210.2

Q ss_pred             HccCCccccccCcCCcccEEEeEe-cCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      ..++|++.++||+|+||.||+|+. .+++.||||++........+.+.+|+.++++++||||+++++++...+..++|||
T Consensus        18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   97 (297)
T 3fxz_A           18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME   97 (297)
T ss_dssp             GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence            346899999999999999999985 4689999999977666667889999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      |+++++|.+++..    ..+++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||++.......
T Consensus        98 ~~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  170 (297)
T 3fxz_A           98 YLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ  170 (297)
T ss_dssp             CCTTCBHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred             CCCCCCHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc
Confidence            9999999999843    24889999999999999999999998   9999999999999999999999999998765433


Q ss_pred             ccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcccc
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQ  711 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~  711 (795)
                      .  ......||+.|+|||++.+..++.++|||||||++|||++|+.||............ . .   ... ...      
T Consensus       171 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~-~-~---~~~-~~~------  236 (297)
T 3fxz_A          171 S--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI-A-T---NGT-PEL------  236 (297)
T ss_dssp             C--CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH-H-H---HCS-CCC------
T ss_pred             c--ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-H-h---CCC-CCC------
Confidence            2  234467999999999999999999999999999999999999999654322211110 0 0   000 000      


Q ss_pred             chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          712 NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       712 ~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                       ..+......+.+++.+||+.||++|||+.|++++-
T Consensus       237 -~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~  271 (297)
T 3fxz_A          237 -QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQ  271 (297)
T ss_dssp             -SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCG
T ss_pred             -CCccccCHHHHHHHHHHccCChhHCcCHHHHhhCh
Confidence             11122345678899999999999999999999853

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A*

Probab=100.00  E-value=1.4e-42  Score=361.74  Aligned_cols=233  Identities=19%  Similarity=0.219  Sum_probs=181.3

Q ss_pred             hccccccCCCCCccCCCCeEEeCCCeEEEEEeCCCCCCceEEEEEeccCCCeEEEecCCCCCCccC----cceEEEeeCC
Q 003786           21 LSIAADNITPSRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPDTIVWVANRNSPIFDS----NAVLTISNGG   96 (795)
Q Consensus        21 ~~~~~~~l~~~~~l~~~~~l~s~~g~f~lgf~~~~~~~~~~~~iw~~~~~~t~vW~an~~~p~~~~----~~~l~~~~~g   96 (795)
                      .+++.|+|++||+|++|++|+|++|.|+||||+++   ++|+   |+ ..+ |||+|||++|+.++    +++|+|+.||
T Consensus        10 ~~~~~~~l~~g~~l~~~~~l~S~~g~F~lgf~~~~---~~~l---y~-~~~-vvW~Anr~~p~~~~~~~~~~~l~l~~~G   81 (276)
T 3m7h_A           10 NGVGTSVLPAYQTLSAGQYLLSPNQRFKLLLQGDG---NLVI---QD-NGA-TVWVANEQQPFSSTIPLRNKKAPLAFYV   81 (276)
T ss_dssp             CCTTSSEECTTEEBCTTCEEECTTSSEEEEECTTS---CEEE---EE-TTE-EEEECSTTSTTEEEEECCCTTCCSEEEE
T ss_pred             ccccCCEecCCCEecCCCEEEcCCCcEEEEEECCC---CeEE---EC-CCC-eEEECCCCCCcCCcccccceEEEEeCCC
Confidence            45678999999999999999999999999999554   5666   76 445 99999999999875    7899999999


Q ss_pred             ceEE--eCCCCceEEeecCCCC-----ccccEEEEccCCCeEEeecCCCCCcccceecccCCCchhhhccCeeccccccC
Q 003786           97 KLVL--LNQTNGTIWSSNLSRE-----VKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQSFDHPSDTLLAGMKLGWDLKTG  169 (795)
Q Consensus        97 ~lvl--~~~~~~~~Wst~~~~~-----~~~~~a~l~d~GNlvl~~~~~~~~~~~~~WqSFd~PTDtlLpgqkl~~~~~~~  169 (795)
                      ||||  .|++|.+||+|+++..     ..+..|+|+|+|||||+|       +.+||||  |||||+|||||||.+.++|
T Consensus        82 ~Lvl~~~~~~~~~vWst~~~~~~~~~~~~~~~a~L~d~GNlVl~~-------~~~lWqS--~ptdtlLpg~~~~~~l~~g  152 (276)
T 3m7h_A           82 QYGAFLDDYSRRRVWLTDNSTFTSNDQWNRTHLVLQDDGNIVLVD-------SLALWNG--TPAIPLVPGAIDSLLLAPG  152 (276)
T ss_dssp             SSSEEEEEGGGTEEEEECCCCCCCTTHHHHEEEEECTTSCEEEEE-------EEEEEES--CTTSCCCCSCTTCEEECSS
T ss_pred             cEEEEEeCCCCCEEEEeCCCcccccccCCceEEEEeCCCCEEecC-------CceeeCc--ccccccccccccccccccC
Confidence            9999  7888999999998652     345789999999999996       4689999  9999999999999999888


Q ss_pred             cceeEEEecCCCCCCCCceEEeeccCCcceEEEEc-CceeEEeeCCCCCeeeeccCCCcccccceeeeCCC-eeEEEEec
Q 003786          170 LERYQTSWKSDDDPSPGNYTHRLDIHVLPKLCTYN-GSVKLLCSGPWNGAIFAAIPSYSYLYKPTVVDNED-EIYYRYDS  247 (795)
Q Consensus       170 ~~~~l~Sw~s~~dps~G~ys~~~~~~~~~~~~~~~-~s~~~~~sg~w~~~~f~~~p~~~~~~~~~~~~n~~-~~~~~~~~  247 (795)
                      ..  |   ++.+||++|.|++++++++.  +++|+ ++..||++|+|+.......  ....-.+.+.++.. .+.++++.
T Consensus       153 ~~--L---~S~~dps~G~fsl~l~~dGn--lvLy~~~~~~yW~Sgt~~~~~~~l~--l~~dGnLvl~d~~~~~vWsS~t~  223 (276)
T 3m7h_A          153 SE--L---VQGVVYGAGASKLVFQGDGN--LVAYGPNGAATWNAGTQGKGAVRAV--FQGDGNLVVYGAGNAVLWHSHTG  223 (276)
T ss_dssp             EE--E---CTTCEEEETTEEEEECTTSC--EEEECTTSSEEEECCCTTTTCCEEE--ECTTSCEEEECTTSCEEEECSCT
T ss_pred             cc--c---ccCCCCCCceEEEeecCCce--EEEEeCCCeEEEECCCCCCccEEEE--EcCCCeEEEEeCCCcEEEEecCC
Confidence            64  5   77899999999999999884  45565 4689999999976421100  01111222333333 23333322


Q ss_pred             CCCceEEEEEECCCCcEEEEEEecCCCceEEEEeccc
Q 003786          248 YNSPVIMTLKLNPSGKIQHLIWNERNRTWEAFFSLPD  284 (795)
Q Consensus       248 ~~~~~~~rl~L~~~G~l~~~~w~~~~~~W~~~~~~p~  284 (795)
                        .....|++|+.||++++|.|   ...|..++..|.
T Consensus       224 --~~~~~rl~Ld~dGnLvly~~---~~~Wqsf~~~P~  255 (276)
T 3m7h_A          224 --GHASAVLRLQANGSIAILDE---KPVWARFGFQPT  255 (276)
T ss_dssp             --TCTTCEEEECTTSCEEEEEE---EEEEESSSCCTT
T ss_pred             --CCCCEEEEEcCCccEEEEcC---CCeEEccCccCC
Confidence              22358999999999999999   346777666664

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=4e-42  Score=369.46  Aligned_cols=265  Identities=26%  Similarity=0.406  Sum_probs=205.2

Q ss_pred             HHccCCccccccCcCCcccEEEeEecCcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          472 AATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       472 ~~~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      ....+|++.++||+|+||.||+|+. +++.||||++....  ....+++.+|+++|++++||||+++++++.+....++|
T Consensus        34 i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv  112 (309)
T 3p86_A           34 IPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV  112 (309)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred             CChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence            3457899999999999999999986 68899999987543  23346788999999999999999999999999999999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      |||+++++|.+++........+++..+..++.||++||+|||+.+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus       113 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~  191 (309)
T 3p86_A          113 TEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAS  191 (309)
T ss_dssp             EECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSS-SCCCCTTCCGGGEEECTTCCEEECCCC-------
T ss_pred             EecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCC-CCEECCCCChhhEEEeCCCcEEECCCCCCccccc
Confidence            999999999999965544455899999999999999999999875 3499999999999999999999999999986443


Q ss_pred             CcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcc
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT  709 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~  709 (795)
                      ..  .......||+.|+|||++.+..++.++|||||||++|||++|+.||........  ......  . ...       
T Consensus       192 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~--~~~~~~--~-~~~-------  257 (309)
T 3p86_A          192 TF--LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQV--VAAVGF--K-CKR-------  257 (309)
T ss_dssp             ------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHH--HHHHHH--S-CCC-------
T ss_pred             cc--cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHh--c-CCC-------
Confidence            22  123346799999999999999999999999999999999999999975432221  111100  0 000       


Q ss_pred             ccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccccCCC
Q 003786          710 LQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINL  754 (795)
Q Consensus       710 l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~~~l  754 (795)
                        ...+......+.+++.+||+.+|++|||+.+|++.|+......
T Consensus       258 --~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~  300 (309)
T 3p86_A          258 --LEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA  300 (309)
T ss_dssp             --CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred             --CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence              0111223456789999999999999999999999998755443

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=8.4e-42  Score=376.32  Aligned_cols=259  Identities=26%  Similarity=0.382  Sum_probs=211.4

Q ss_pred             ccCCccccccCcCCcccEEEeEec--------CcceEEEEEecccC-ccchHHHHHHHHHHHhc-CCcccceeeeeeeec
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL--------NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIEL  543 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~  543 (795)
                      .++|++.+.||+|+||.||+|+..        ++..||||++.... ....+.+.+|+.+|+++ +||||+++++++.+.
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  159 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  159 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence            478999999999999999999752        35679999997543 23456789999999999 899999999999999


Q ss_pred             ceeeEEeecCCCCChhhhhhccCC-------------cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEE
Q 003786          544 EEKILIYEYMPNKSLDFFLFDSTK-------------ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILL  610 (795)
Q Consensus       544 ~~~~lv~E~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll  610 (795)
                      +..++||||+++|+|.+++.....             ...+++..+..++.||++||.|||+++   |+||||||+||||
T Consensus       160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll  236 (370)
T 2psq_A          160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLV  236 (370)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEE
T ss_pred             CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchhhEEE
Confidence            999999999999999999965432             235788999999999999999999998   9999999999999


Q ss_pred             CCCCCeeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhH
Q 003786          611 DKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTL  689 (795)
Q Consensus       611 ~~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~  689 (795)
                      +.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||........  
T Consensus       237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~--  314 (370)
T 2psq_A          237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL--  314 (370)
T ss_dssp             CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH--
T ss_pred             CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHH--
Confidence            9999999999999987654443333444567899999999999999999999999999999999 9999876443222  


Q ss_pred             hHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          690 LGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       690 ~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                      ....    .....         ...+......+.+++.+||+.+|++||++.|++++|+..
T Consensus       315 ~~~~----~~~~~---------~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~i  362 (370)
T 2psq_A          315 FKLL----KEGHR---------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI  362 (370)
T ss_dssp             HHHH----HTTCC---------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHH----hcCCC---------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            1111    11110         111222345788999999999999999999999999763

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=7.5e-42  Score=370.17  Aligned_cols=250  Identities=26%  Similarity=0.371  Sum_probs=207.1

Q ss_pred             HHccCCccccccCcCCcccEEEeEe-cCcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeE
Q 003786          472 AATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKIL  548 (795)
Q Consensus       472 ~~~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  548 (795)
                      ...++|++.+.||+|+||.||+|++ .+|+.||||++....  ....+.+.+|+++|+.++||||+++++++...+..++
T Consensus        12 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l   91 (328)
T 3fe3_A           12 PHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYL   91 (328)
T ss_dssp             CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             CccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEE
Confidence            3457899999999999999999987 569999999996542  2345678899999999999999999999999999999


Q ss_pred             EeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccC
Q 003786          549 IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      ||||+++++|.+++...   ..+++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||++....
T Consensus        92 v~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~  165 (328)
T 3fe3_A           92 IMEYASGGEVFDYLVAH---GRMKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFT  165 (328)
T ss_dssp             EECCCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTCCGGGS
T ss_pred             EEECCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCCHHHEEEcCCCCEEEeeccCceecC
Confidence            99999999999988543   45889999999999999999999998   9999999999999999999999999998765


Q ss_pred             CCcccccccccccccccccccccccCCCC-cccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccC
Q 003786          629 GDELQSKTKRIVGTYGYMSPEYAQQGLFS-IKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID  707 (795)
Q Consensus       629 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~-~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id  707 (795)
                      ...   .....+||+.|+|||++.+..++ .++|||||||++|+|++|+.||+.......  .....   . +..     
T Consensus       166 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--~~~i~---~-~~~-----  231 (328)
T 3fe3_A          166 VGG---KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL--RERVL---R-GKY-----  231 (328)
T ss_dssp             SSC---GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHH---H-CCC-----
T ss_pred             CCC---ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHH--HHHHH---h-CCC-----
Confidence            432   23456899999999999887764 899999999999999999999976542221  11110   0 000     


Q ss_pred             ccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          708 PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       708 ~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                           ..+......+.+++.+||+.||++|||++|++++
T Consensus       232 -----~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  265 (328)
T 3fe3_A          232 -----RIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD  265 (328)
T ss_dssp             -----CCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred             -----CCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence                 0111233467789999999999999999999986

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=1.1e-41  Score=365.98  Aligned_cols=261  Identities=25%  Similarity=0.427  Sum_probs=211.8

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      .++|++.++||+|+||.||+|++. +++.||+|++........+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   88 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY   88 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence            467999999999999999999875 5889999999776666778899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      +++++|.+++...  ...+++..+..++.||++||+|||+++   |+||||||+|||++.++.+||+|||+++.......
T Consensus        89 ~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  163 (310)
T 3s95_A           89 IKGGTLRGIIKSM--DSQYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKT  163 (310)
T ss_dssp             CTTCBHHHHHHHC--CTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEECTTSCEEECCCTTCEECC----
T ss_pred             cCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCcCeEEECCCCCEEEeecccceecccccc
Confidence            9999999999543  345899999999999999999999998   99999999999999999999999999987643321


Q ss_pred             cc------------cccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCc
Q 003786          633 QS------------KTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDD  700 (795)
Q Consensus       633 ~~------------~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~  700 (795)
                      ..            ......||+.|+|||++.+..++.++|||||||++|||++|..|+................     
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~-----  238 (310)
T 3s95_A          164 QPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRG-----  238 (310)
T ss_dssp             ----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHH-----
T ss_pred             cccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhc-----
Confidence            11            1114579999999999999999999999999999999999999886543222111000000     


Q ss_pred             ccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccccC
Q 003786          701 RAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTI  752 (795)
Q Consensus       701 ~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~~  752 (795)
                          ..+    ...+...+..+.+++.+||+.||++|||+.+++++|+....
T Consensus       239 ----~~~----~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~  282 (310)
T 3s95_A          239 ----FLD----RYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRM  282 (310)
T ss_dssp             ----HHH----HTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ----ccc----ccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence                000    00112223467889999999999999999999999987543

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=4.6e-41  Score=363.47  Aligned_cols=255  Identities=25%  Similarity=0.311  Sum_probs=206.6

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      .++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e   85 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence            478999999999999999999865 68899999986543 2334678999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      |+++++|.+++.   ....+++..+..++.||++||.|||+.+   |+||||||+|||++.++.+||+|||++..+....
T Consensus        86 ~~~~~~L~~~l~---~~~~~~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  159 (323)
T 3tki_A           86 YCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNN  159 (323)
T ss_dssp             CCTTEEGGGGSB---TTTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred             cCCCCcHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccchHHEEEeCCCCEEEEEeeccceeccCC
Confidence            999999999884   3345899999999999999999999998   9999999999999999999999999998764333


Q ss_pred             ccccccccccccccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccc
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQGLF-SIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL  710 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~~~~-~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l  710 (795)
                      .........||+.|+|||++.+..+ +.++|||||||++|+|++|+.||................     ..        
T Consensus       160 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~-----~~--------  226 (323)
T 3tki_A          160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK-----KT--------  226 (323)
T ss_dssp             EECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTT-----CT--------
T ss_pred             cccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcc-----cc--------
Confidence            3333445689999999999987765 789999999999999999999997655433322211110     00        


Q ss_pred             cchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       711 ~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                      ...........+.+++.+||+.||++|||+.|++++.
T Consensus       227 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~  263 (323)
T 3tki_A          227 YLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDR  263 (323)
T ss_dssp             TSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCT
T ss_pred             cCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhCh
Confidence            0001112345677899999999999999999999864

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=9.8e-41  Score=362.55  Aligned_cols=250  Identities=23%  Similarity=0.274  Sum_probs=206.9

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEeccc---CccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQ---SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      .++|++.+.||+|+||.||+|+.. +++.||||++.+.   .....+.+.+|+.+|++++||||+++++++.+.+..++|
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   83 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV   83 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence            468999999999999999999875 5899999999754   234556788999999999999999999999999999999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      |||+++|+|..++..   ...+++..+..++.||+.||.|||+++   |+||||||+|||++.+|.+||+|||+++....
T Consensus        84 ~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~  157 (337)
T 1o6l_A           84 MEYANGGELFFHLSR---ERVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGIS  157 (337)
T ss_dssp             EECCTTCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred             EeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCCHHHEEECCCCCEEEeeccchhhccc
Confidence            999999999988843   345889999999999999999999998   99999999999999999999999999986432


Q ss_pred             CcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcc
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT  709 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~  709 (795)
                      ..  ......+||+.|+|||++.+..++.++|||||||++|||++|+.||...+....  .....  .....        
T Consensus       158 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~--~~~i~--~~~~~--------  223 (337)
T 1o6l_A          158 DG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL--FELIL--MEEIR--------  223 (337)
T ss_dssp             TT--CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHH--HCCCC--------
T ss_pred             CC--CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHH--HHHHH--cCCCC--------
Confidence            22  223456899999999999999999999999999999999999999865432211  11110  00000        


Q ss_pred             ccchhhHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHHH
Q 003786          710 LQNEASYLILNRYINVGLLCVQEDAADRP-----TMFEVVSML  747 (795)
Q Consensus       710 l~~~~~~~~~~~l~~li~~cL~~dP~~RP-----t~~evl~~L  747 (795)
                          .+......+.+++.+||+.||++||     +++||++|-
T Consensus       224 ----~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~  262 (337)
T 1o6l_A          224 ----FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHR  262 (337)
T ss_dssp             ----CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSG
T ss_pred             ----CCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCC
Confidence                1112345678899999999999999     899999863

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=1.4e-40  Score=359.44  Aligned_cols=250  Identities=27%  Similarity=0.369  Sum_probs=207.2

Q ss_pred             CccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCCC
Q 003786          477 FSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPN  555 (795)
Q Consensus       477 ~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~  555 (795)
                      |+..++||+|+||.||+|+.. +|+.||||++........+.+.+|+.++++++||||+++++++...+..++||||+++
T Consensus        47 ~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  126 (321)
T 2c30_A           47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQG  126 (321)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCS
T ss_pred             hhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCC
Confidence            677789999999999999876 6999999999876666778899999999999999999999999999999999999999


Q ss_pred             CChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccccc
Q 003786          556 KSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSK  635 (795)
Q Consensus       556 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~  635 (795)
                      ++|.+++..    ..+++..+..++.||++||.|||+.+   |+||||||+|||++.++.+||+|||++........  .
T Consensus       127 ~~L~~~l~~----~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~--~  197 (321)
T 2c30_A          127 GALTDIVSQ----VRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP--K  197 (321)
T ss_dssp             CBHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC--C
T ss_pred             CCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCcEEEeeeeeeeecccCcc--c
Confidence            999998842    35899999999999999999999998   99999999999999999999999999987653321  2


Q ss_pred             ccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhh
Q 003786          636 TKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEAS  715 (795)
Q Consensus       636 ~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~  715 (795)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||.......  .......    ..     .+.+.  ..
T Consensus       198 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~--~~~~~~~----~~-----~~~~~--~~  264 (321)
T 2c30_A          198 RKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQ--AMKRLRD----SP-----PPKLK--NS  264 (321)
T ss_dssp             BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHH----SS-----CCCCT--TG
T ss_pred             cccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHhc----CC-----CCCcC--cc
Confidence            334679999999999999999999999999999999999999986543211  1111100    00     01110  11


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHc
Q 003786          716 YLILNRYINVGLLCVQEDAADRPTMFEVVSMLT  748 (795)
Q Consensus       716 ~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~  748 (795)
                      ...+..+.+++.+||+.||++|||+.|++++.-
T Consensus       265 ~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~  297 (321)
T 2c30_A          265 HKVSPVLRDFLERMLVRDPQERATAQELLDHPF  297 (321)
T ss_dssp             GGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGG
T ss_pred             ccCCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence            123356788999999999999999999998643

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=8.6e-41  Score=366.38  Aligned_cols=252  Identities=23%  Similarity=0.290  Sum_probs=207.2

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCcc------chHHHHHHHHHHHhcCCcccceeeeeeeeccee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQ------GQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEK  546 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  546 (795)
                      .++|++.+.||+|+||.||+|+.. +|+.||||++.+....      ..+.+.+|+.+|++++||||+++++++.+....
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~   90 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV   90 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence            467999999999999999999875 5899999999764322      357899999999999999999999999999999


Q ss_pred             eEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCC----Ceeeeccc
Q 003786          547 ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDM----NPKISDFG  622 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~----~vkL~DFG  622 (795)
                      ++||||+++++|.+++..   ...+++..+..++.||+.||.|||+++   |+||||||+|||++.++    .+||+|||
T Consensus        91 ~lv~e~~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~~~vkl~DFG  164 (361)
T 2yab_A           91 VLILELVSGGELFDFLAQ---KESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFG  164 (361)
T ss_dssp             EEEEECCCSCBHHHHHTT---CSCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCS
T ss_pred             EEEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeCCCCCccCEEEEecC
Confidence            999999999999999843   446899999999999999999999998   99999999999998877    79999999


Q ss_pred             cccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCccc
Q 003786          623 MARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRA  702 (795)
Q Consensus       623 la~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~  702 (795)
                      ++.......   ......||+.|+|||++.+..++.++|||||||++|+|++|..||........  .....    ... 
T Consensus       165 ~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~--~~~i~----~~~-  234 (361)
T 2yab_A          165 LAHEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET--LANIT----AVS-  234 (361)
T ss_dssp             SCEECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH--HHHHH----TTC-
T ss_pred             CceEcCCCC---ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHH----hcC-
Confidence            998765432   23446799999999999999999999999999999999999999965432211  11110    000 


Q ss_pred             ccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          703 WELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       703 ~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                           ..+...........+.++|.+||+.||++|||+.|++++
T Consensus       235 -----~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  273 (361)
T 2yab_A          235 -----YDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH  273 (361)
T ss_dssp             -----CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             -----CCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence                 001111122234567899999999999999999999975

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=1.5e-41  Score=367.18  Aligned_cols=269  Identities=25%  Similarity=0.331  Sum_probs=208.2

Q ss_pred             HccCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecce----eeE
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEE----KIL  548 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----~~l  548 (795)
                      ...+|++.++||+|+||.||+|+.. ++.||||++.... .......+|+.+|++++||||+++++++.+...    .++
T Consensus        22 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l   99 (322)
T 3soc_A           22 QSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL   99 (322)
T ss_dssp             TTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             chhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence            3478999999999999999999874 7899999996542 334456678999999999999999999987543    699


Q ss_pred             EeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhc----------CCCcEEeccCCCCcEEECCCCCeee
Q 003786          549 IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY----------SRLRVIHRDLKASNILLDKDMNPKI  618 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~----------~~~~iiHrDikp~NIll~~~~~vkL  618 (795)
                      ||||+++|+|.+++..    ..+++..+..++.||++||+|||+.          +   |+||||||+|||++.++.+||
T Consensus       100 v~e~~~~g~L~~~l~~----~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~---ivH~Dlkp~Nill~~~~~~kL  172 (322)
T 3soc_A          100 ITAFHEKGSLSDFLKA----NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA---ISHRDIKSKNVLLKNNLTACI  172 (322)
T ss_dssp             EEECCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE---EECSCCSGGGEEECTTCCEEE
T ss_pred             EEecCCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC---EEeCCCChHhEEECCCCeEEE
Confidence            9999999999999843    3488999999999999999999988          6   999999999999999999999


Q ss_pred             eccccccccCCCccccccccccccccccccccccc-----CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhH
Q 003786          619 SDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQ-----GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHA  693 (795)
Q Consensus       619 ~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~-----~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~  693 (795)
                      +|||+++...............||+.|+|||++.+     ..++.++|||||||++|||++|+.||..............
T Consensus       173 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~  252 (322)
T 3soc_A          173 ADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEE  252 (322)
T ss_dssp             CCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHH
T ss_pred             ccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhh
Confidence            99999987655443333444679999999999876     3567789999999999999999999976543221111100


Q ss_pred             h-hhcc-----CcccccccCccccch-hhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          694 W-DLWK-----DDRAWELIDPTLQNE-ASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       694 ~-~~~~-----~~~~~~~id~~l~~~-~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                      . ....     .........+.+... ........+.+++.+||+.||++|||+.||++.|+..
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l  316 (322)
T 3soc_A          253 IGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQM  316 (322)
T ss_dssp             HCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             hccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            0 0000     000001111111111 1224556789999999999999999999999999763

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=1.1e-40  Score=358.45  Aligned_cols=264  Identities=23%  Similarity=0.301  Sum_probs=203.8

Q ss_pred             HccCCccccccCcCCcccEEEeEecCcceEEEEEecccCc--cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSG--QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      ..++|++.++||+|+||.||+|+..+++.||||++.....  ...+.+.+|++++++++||||+++++++.+....++||
T Consensus        19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   98 (311)
T 3niz_A           19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF   98 (311)
T ss_dssp             SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred             hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence            3478999999999999999999988899999999965422  23467889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      ||+++ +|.+++..  ....+++..+..++.||++||.|||+.+   |+||||||+|||++.++.+||+|||+++.....
T Consensus        99 e~~~~-~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~  172 (311)
T 3niz_A           99 EFMEK-DLKKVLDE--NKTGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIP  172 (311)
T ss_dssp             ECCSE-EHHHHHHT--CTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEETTSC
T ss_pred             cCCCC-CHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCchHhEEECCCCCEEEccCcCceecCCC
Confidence            99986 66666643  2345889999999999999999999998   999999999999999999999999999876432


Q ss_pred             ccccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCc--c------
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDD--R------  701 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~--~------  701 (795)
                      .  .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...........  ........  .      
T Consensus       173 ~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~--i~~~~~~~~~~~~~~~~  248 (311)
T 3niz_A          173 V--RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPK--IFSILGTPNPREWPQVQ  248 (311)
T ss_dssp             C--C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHH--HHHHHCCCCTTTSGGGT
T ss_pred             c--ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHH--HHHHHCCCChHHhhhhh
Confidence            2  12334578999999999876 5789999999999999999999999976553332111  11100000  0      


Q ss_pred             --------cccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          702 --------AWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       702 --------~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                              .....+.............++.+++.+||+.||++|||++|++++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  301 (311)
T 3niz_A          249 ELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH  301 (311)
T ss_dssp             TSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             ccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence                    000111111111122234577899999999999999999999985

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=1.6e-41  Score=372.55  Aligned_cols=267  Identities=27%  Similarity=0.365  Sum_probs=212.7

Q ss_pred             cHHhHHHHccCCccccccCcCCcccEEEeEe------cCcceEEEEEecccCc-cchHHHHHHHHHHHhc-CCcccceee
Q 003786          466 SLASVSAATANFSTENKLGEGGFGPVYKGRL------LNGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKL-QHRNLVRLL  537 (795)
Q Consensus       466 ~~~~i~~~~~~~~~~~~LG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~  537 (795)
                      .........++|++.++||+|+||.||+|++      .+++.||||++..... ...+.+.+|+++++++ +||||++++
T Consensus        13 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~   92 (359)
T 3vhe_A           13 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL   92 (359)
T ss_dssp             CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             CcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeee
Confidence            3444455678999999999999999999973      3468899999976432 3346789999999999 799999999


Q ss_pred             eeeeecce-eeEEeecCCCCChhhhhhccCC-------------------------------------------------
Q 003786          538 GCCIELEE-KILIYEYMPNKSLDFFLFDSTK-------------------------------------------------  567 (795)
Q Consensus       538 ~~~~~~~~-~~lv~E~~~~gsL~~~l~~~~~-------------------------------------------------  567 (795)
                      +++.+.+. .++||||+++|+|.+++.....                                                 
T Consensus        93 ~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (359)
T 3vhe_A           93 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKS  172 (359)
T ss_dssp             EEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------
T ss_pred             eeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccc
Confidence            99887654 8999999999999999965432                                                 


Q ss_pred             --------------cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccc
Q 003786          568 --------------ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ  633 (795)
Q Consensus       568 --------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~  633 (795)
                                    ...+++..+..++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+++........
T Consensus       173 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  249 (359)
T 3vhe_A          173 LSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY  249 (359)
T ss_dssp             -----------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTC
T ss_pred             cchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCcEEEEeccceeeecccccc
Confidence                          122888999999999999999999998   999999999999999999999999999876443333


Q ss_pred             ccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCccccc
Q 003786          634 SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQN  712 (795)
Q Consensus       634 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~  712 (795)
                      .......||+.|+|||++.+..++.++|||||||++|||++ |..||............ .    .....         .
T Consensus       250 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~-~----~~~~~---------~  315 (359)
T 3vhe_A          250 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR-L----KEGTR---------M  315 (359)
T ss_dssp             EEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHH-H----HHTCC---------C
T ss_pred             hhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHH-H----HcCCC---------C
Confidence            33445678999999999999999999999999999999998 99998765433221111 1    00100         0


Q ss_pred             hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          713 EASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       713 ~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      ..+......+.+++.+||+.||++|||+.||+++|+.
T Consensus       316 ~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~  352 (359)
T 3vhe_A          316 RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN  352 (359)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHH
Confidence            0111233567889999999999999999999999976

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=7.9e-41  Score=365.67  Aligned_cols=266  Identities=24%  Similarity=0.329  Sum_probs=208.4

Q ss_pred             HccCCccccccCcCCcccEEEeEec-CcceEEEEEeccc---CccchHHHHHHHHHHHhc-CCcccceeeeeeeecceee
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQ---SGQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEEKI  547 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~  547 (795)
                      ..++|++.+.||+|+||.||+|+.. +++.||||++.+.   .....+.+.+|..+|+.+ +||||+++++++.+.+..+
T Consensus        21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~  100 (353)
T 3txo_A           21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF  100 (353)
T ss_dssp             --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence            4578999999999999999999865 5899999999754   234456788999999988 7999999999999999999


Q ss_pred             EEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccccc
Q 003786          548 LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF  627 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~  627 (795)
                      +||||+++|+|..++..   ...+++..+..++.||+.||.|||+++   |+||||||+||||+.++.+||+|||+++..
T Consensus       101 lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NILl~~~g~ikL~DFG~a~~~  174 (353)
T 3txo_A          101 FVMEFVNGGDLMFHIQK---SRRFDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEG  174 (353)
T ss_dssp             EEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred             EEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCCHHHEEECCCCCEEEccccceeec
Confidence            99999999999998854   345899999999999999999999998   999999999999999999999999999854


Q ss_pred             CCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccC
Q 003786          628 GGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID  707 (795)
Q Consensus       628 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id  707 (795)
                      ....  ......+||+.|+|||++.+..++.++|||||||++|||++|+.||...+....  ....   .. ...     
T Consensus       175 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~--~~~i---~~-~~~-----  241 (353)
T 3txo_A          175 ICNG--VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDL--FEAI---LN-DEV-----  241 (353)
T ss_dssp             CC-----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHH---HH-CCC-----
T ss_pred             ccCC--ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHH--HHHH---Hc-CCC-----
Confidence            3222  233456899999999999999999999999999999999999999976443221  1111   00 000     


Q ss_pred             ccccchhhHHHHHHHHHHHHhhccCCCCCCCCH------HHHHHHHccc--------cCCCCCCCCCCc
Q 003786          708 PTLQNEASYLILNRYINVGLLCVQEDAADRPTM------FEVVSMLTNK--------TINLPHPRQPAF  762 (795)
Q Consensus       708 ~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~------~evl~~L~~~--------~~~l~~p~~p~~  762 (795)
                           ..+......+.+++.+||+.||++||++      .|+++|-=..        ...++.|..|..
T Consensus       242 -----~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~~w~~l~~~~~~~p~~p~~  305 (353)
T 3txo_A          242 -----VYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWAQLNHRQIEPPFRPRI  305 (353)
T ss_dssp             -----CCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTCCHHHHHTTCSCCSCCCCC
T ss_pred             -----CCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCCCHHHHhcCcCCCCccCCC
Confidence                 0111133467789999999999999998      8888853221        233555666654

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=4.3e-41  Score=353.64  Aligned_cols=255  Identities=29%  Similarity=0.457  Sum_probs=210.0

Q ss_pred             ccCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecC
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYM  553 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  553 (795)
                      .++|++.+.||+|+||.||+|+..+++.||||++.... ...+.+.+|++++++++||||+++++++.+....++||||+
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   87 (269)
T 4hcu_A            9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM   87 (269)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence            36799999999999999999998888899999997543 44578999999999999999999999999999999999999


Q ss_pred             CCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccc
Q 003786          554 PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ  633 (795)
Q Consensus       554 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~  633 (795)
                      ++++|.+++..  ....+++..+..++.|+++||.|||+.+   |+||||||+||+++.++.+||+|||++........ 
T Consensus        88 ~~~~L~~~l~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-  161 (269)
T 4hcu_A           88 EHGCLSDYLRT--QRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-  161 (269)
T ss_dssp             TTCBHHHHHHT--TTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH-
T ss_pred             CCCcHHHHHHh--cCcccCHHHHHHHHHHHHHHHHHHHhCC---eecCCcchheEEEcCCCCEEecccccccccccccc-
Confidence            99999999854  2345889999999999999999999998   99999999999999999999999999987643321 


Q ss_pred             ccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCccccc
Q 003786          634 SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQN  712 (795)
Q Consensus       634 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~  712 (795)
                      .......+|+.|+|||++.+..++.++||||||+++|+|++ |+.||........  ....    ....  ...      
T Consensus       162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~--~~~~----~~~~--~~~------  227 (269)
T 4hcu_A          162 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV--VEDI----STGF--RLY------  227 (269)
T ss_dssp             HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH--HHHH----HTTC--CCC------
T ss_pred             ccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHH--HHHH----hcCc--cCC------
Confidence            22233457889999999998999999999999999999999 8988875432221  1111    0000  001      


Q ss_pred             hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          713 EASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       713 ~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                       .+......+.+++.+||+.+|++||++.|++++|+..
T Consensus       228 -~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l  264 (269)
T 4hcu_A          228 -KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI  264 (269)
T ss_dssp             -CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -CCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHH
Confidence             1111235678899999999999999999999999763

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=1.2e-40  Score=350.08  Aligned_cols=258  Identities=28%  Similarity=0.401  Sum_probs=211.7

Q ss_pred             HccCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      ..++|++.+.||+|+||.||+|+..+++.||||++.... ...+++.+|++++++++||||+++++++.+....++||||
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (268)
T 3sxs_A            6 KREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY   84 (268)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred             chhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence            347899999999999999999998888899999996543 3457799999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      +++++|.+++...  ...+++..+..++.||++||.|||+.+   |+||||||+||+++.++.+||+|||++........
T Consensus        85 ~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~  159 (268)
T 3sxs_A           85 ISNGCLLNYLRSH--GKGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY  159 (268)
T ss_dssp             CTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE
T ss_pred             cCCCcHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCcceEEECCCCCEEEccCccceecchhhh
Confidence            9999999998543  345899999999999999999999998   99999999999999999999999999987654432


Q ss_pred             cccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCcccc
Q 003786          633 QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQ  711 (795)
Q Consensus       633 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~  711 (795)
                      . ......+|+.|+|||.+.+..++.++||||||+++|+|++ |+.||+........  ...    ....  ....+   
T Consensus       160 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~--~~~----~~~~--~~~~~---  227 (268)
T 3sxs_A          160 V-SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVV--LKV----SQGH--RLYRP---  227 (268)
T ss_dssp             E-ECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH--HHH----HTTC--CCCCC---
T ss_pred             h-cccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHH--HHH----HcCC--CCCCC---
Confidence            2 2233456788999999998899999999999999999999 99998654422211  111    0000  00111   


Q ss_pred             chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccccC
Q 003786          712 NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTI  752 (795)
Q Consensus       712 ~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~~  752 (795)
                          ...+..+.+++.+||+.+|++|||+.|++++|+....
T Consensus       228 ----~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~  264 (268)
T 3sxs_A          228 ----HLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE  264 (268)
T ss_dssp             ----TTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred             ----CcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence                1123467889999999999999999999999987543

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=4.6e-40  Score=354.95  Aligned_cols=271  Identities=21%  Similarity=0.248  Sum_probs=214.8

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecc--eeeEE
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELE--EKILI  549 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv  549 (795)
                      .++|++.++||+|+||.||+|+.. +++.||||++.... ....+.+.+|+++|++++||||+++++++....  ..++|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   87 (319)
T 4euu_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI   87 (319)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence            467999999999999999999875 48999999997543 344577889999999999999999999988765  67999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEE----CCCCCeeeecccccc
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILL----DKDMNPKISDFGMAR  625 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll----~~~~~vkL~DFGla~  625 (795)
                      |||+++++|.+++........+++..+..++.||++||.|||+.+   |+||||||+|||+    +.++.+||+|||+++
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~  164 (319)
T 4euu_A           88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR  164 (319)
T ss_dssp             EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred             EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence            999999999999976555555899999999999999999999998   9999999999999    788889999999998


Q ss_pred             ccCCCcccccccccccccccccccccc--------cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcch--hHhHhHhh
Q 003786          626 IFGGDELQSKTKRIVGTYGYMSPEYAQ--------QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSL--TLLGHAWD  695 (795)
Q Consensus       626 ~~~~~~~~~~~~~~~gt~~y~APE~~~--------~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~--~~~~~~~~  695 (795)
                      ......   ......||+.|+|||++.        +..++.++|||||||++|||++|+.||........  ........
T Consensus       165 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  241 (319)
T 4euu_A          165 ELEDDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT  241 (319)
T ss_dssp             ECCTTC---CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHH
T ss_pred             ecCCCC---ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhc
Confidence            765433   223457999999999886        57889999999999999999999999965432221  11111111


Q ss_pred             hccCcccccc---c--------CccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          696 LWKDDRAWEL---I--------DPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       696 ~~~~~~~~~~---i--------d~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                      ..........   .        +..............+.+++.+||+.||++|||++|++++.+..
T Consensus       242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~  307 (319)
T 4euu_A          242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI  307 (319)
T ss_dssp             HCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred             CCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence            1110000000   0        00111234567778889999999999999999999999998774

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=2.1e-40  Score=366.88  Aligned_cols=273  Identities=20%  Similarity=0.278  Sum_probs=211.1

Q ss_pred             HccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhc-CCcccceeeeeeeecceee
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEEKI  547 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~  547 (795)
                      ..++|++.++||+|+||.||+|+.. +++.||||++.+..   ....+.+.+|..+|.++ +||||+++++++.+.+..+
T Consensus        50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~  129 (396)
T 4dc2_A           50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF  129 (396)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred             ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence            3478999999999999999999875 47889999997642   23345688999999887 8999999999999999999


Q ss_pred             EEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccccc
Q 003786          548 LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF  627 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~  627 (795)
                      +||||+++|+|..++..   ...+++..+..++.||+.||.|||+++   |+||||||+||||+.++.+||+|||+++..
T Consensus       130 lV~E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFGla~~~  203 (396)
T 4dc2_A          130 FVIEYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEG  203 (396)
T ss_dssp             EEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred             EEEEcCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEECCCCCEEEeecceeeec
Confidence            99999999999988853   345899999999999999999999998   999999999999999999999999999853


Q ss_pred             CCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchh---HhHhHhhhccCccccc
Q 003786          628 GGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLT---LLGHAWDLWKDDRAWE  704 (795)
Q Consensus       628 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~  704 (795)
                      ....  ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.........   .............   
T Consensus       204 ~~~~--~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~---  278 (396)
T 4dc2_A          204 LRPG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ---  278 (396)
T ss_dssp             CCTT--CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCC---
T ss_pred             ccCC--CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccc---
Confidence            2221  2344578999999999999999999999999999999999999999654321110   0000000000000   


Q ss_pred             ccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCH------HHHHHHHccc--------cCCCCCCCCCCcc
Q 003786          705 LIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTM------FEVVSMLTNK--------TINLPHPRQPAFS  763 (795)
Q Consensus       705 ~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~------~evl~~L~~~--------~~~l~~p~~p~~~  763 (795)
                             ...+......+.+++.+||+.||++||++      .||+++-=..        ...+++|..|...
T Consensus       279 -------~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i~w~~l~~~~~~pp~~p~~~  344 (396)
T 4dc2_A          279 -------IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNIS  344 (396)
T ss_dssp             -------CCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTCCHHHHHTTCSCCSCCCCCC
T ss_pred             -------cCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCCCHHHHHcCCCCCCCcCCCC
Confidence                   01112234567899999999999999985      6787753211        2235566666543

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=2e-40  Score=359.00  Aligned_cols=253  Identities=24%  Similarity=0.306  Sum_probs=207.0

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCc------cchHHHHHHHHHHHhcCCcccceeeeeeeeccee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG------QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEK  546 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  546 (795)
                      .++|++.+.||+|+||.||+|+.. +++.||||++.....      ...+.+.+|+.+|++++||||+++++++.+....
T Consensus        10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   89 (326)
T 2y0a_A           10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV   89 (326)
T ss_dssp             HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence            356999999999999999999875 589999999865432      2457899999999999999999999999999999


Q ss_pred             eEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCC----Ceeeeccc
Q 003786          547 ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDM----NPKISDFG  622 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~----~vkL~DFG  622 (795)
                      ++||||+++++|.+++..   ...+++..+..++.||+.||.|||+++   |+||||||+|||++.++    .+||+|||
T Consensus        90 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg  163 (326)
T 2y0a_A           90 ILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFG  163 (326)
T ss_dssp             EEEEECCCSCBHHHHHTT---SSCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCSSSSSCCEEECCCT
T ss_pred             EEEEEcCCCCCHHHHHHh---cCCcCHHHHHHHHHHHHHHHHHHHHCC---eEcCCCCHHHEEEecCCCCCCCEEEEECC
Confidence            999999999999999843   356899999999999999999999998   99999999999999887    89999999


Q ss_pred             cccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCccc
Q 003786          623 MARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRA  702 (795)
Q Consensus       623 la~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~  702 (795)
                      +++......   ......||+.|+|||++.+..++.++|||||||++|+|++|..||........  .......      
T Consensus       164 ~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--~~~~~~~------  232 (326)
T 2y0a_A          164 LAHKIDFGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET--LANVSAV------  232 (326)
T ss_dssp             TCEECCTTS---CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH--HHHHHHT------
T ss_pred             CCeECCCCC---ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH--HHHHHhc------
Confidence            998764332   22346799999999999999999999999999999999999999865432211  1111000      


Q ss_pred             ccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          703 WELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       703 ~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                          ............+..+.+++.+||+.||++|||+.|++++-
T Consensus       233 ----~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp  273 (326)
T 2y0a_A          233 ----NYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP  273 (326)
T ss_dssp             ----CCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHST
T ss_pred             ----CCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCC
Confidence                00011111122345678999999999999999999999863

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.2e-40  Score=357.82  Aligned_cols=253  Identities=21%  Similarity=0.281  Sum_probs=207.5

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      .++|++.+.||+|+||.||+|+.. +++.+|+|++... ....+.+.+|+.+|+.++||||+++++++.+.+..++||||
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   82 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence            468999999999999999999865 5889999998643 34456789999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECC--CCCeeeeccccccccCCC
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDK--DMNPKISDFGMARIFGGD  630 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~--~~~vkL~DFGla~~~~~~  630 (795)
                      +++++|.+++..  ....+++..+..++.||+.||.|||+++   |+||||||+|||++.  ++.+||+|||++......
T Consensus        83 ~~g~~L~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~~g---ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~  157 (321)
T 1tki_A           83 ISGLDIFERINT--SAFELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG  157 (321)
T ss_dssp             CCCCBHHHHHTS--SSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT
T ss_pred             CCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC
Confidence            999999998843  2345899999999999999999999998   999999999999987  789999999999876543


Q ss_pred             cccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccc
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL  710 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l  710 (795)
                      .   ......||+.|+|||++.+..++.++|||||||++|+|++|..||........  ......   ...       ..
T Consensus       158 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--~~~i~~---~~~-------~~  222 (321)
T 1tki_A          158 D---NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQI--IENIMN---AEY-------TF  222 (321)
T ss_dssp             C---EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH--HHHHHH---TCC-------CC
T ss_pred             C---ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHH--HHHHHc---CCC-------CC
Confidence            3   23346799999999999998899999999999999999999999975432211  111100   000       00


Q ss_pred             cchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       711 ~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                      ........+..+.+++.+||+.||++|||+.|++++-
T Consensus       223 ~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp  259 (321)
T 1tki_A          223 DEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHP  259 (321)
T ss_dssp             CHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred             ChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcCh
Confidence            1111123345788999999999999999999999963

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=5.4e-41  Score=363.32  Aligned_cols=258  Identities=28%  Similarity=0.433  Sum_probs=206.6

Q ss_pred             ccCCccccccCcCCcccEEEeEec----CcceEEEEEeccc-CccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeE
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL----NGQEVAVKRLSSQ-SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKIL  548 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  548 (795)
                      ..+|++.+.||+|+||.||+|+..    .+..||||++... .....+.+.+|+.+|++++||||+++++++.+.+..++
T Consensus        48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  127 (325)
T 3kul_A           48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI  127 (325)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred             hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence            467999999999999999999864    2445999999764 33345679999999999999999999999999999999


Q ss_pred             EeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccC
Q 003786          549 IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      ||||+++++|.+++...  ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+++...
T Consensus       128 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~  202 (325)
T 3kul_A          128 VTEYMENGSLDTFLRTH--DGQFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLE  202 (325)
T ss_dssp             EEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred             EeeCCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEECCCCCEEECCCCcccccc
Confidence            99999999999998533  345899999999999999999999998   9999999999999999999999999998765


Q ss_pred             CCccc-ccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCccccccc
Q 003786          629 GDELQ-SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELI  706 (795)
Q Consensus       629 ~~~~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i  706 (795)
                      ..... .......+|+.|+|||++.+..++.++|||||||++|||++ |..||........  ....    ....     
T Consensus       203 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~--~~~~----~~~~-----  271 (325)
T 3kul_A          203 DDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDV--ISSV----EEGY-----  271 (325)
T ss_dssp             ----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHH--HHHH----HTTC-----
T ss_pred             cCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHH--HHHH----HcCC-----
Confidence            43211 12223456788999999998999999999999999999999 9999865432221  1111    0110     


Q ss_pred             CccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcccc
Q 003786          707 DPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKT  751 (795)
Q Consensus       707 d~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~  751 (795)
                          ....+...+..+.+++.+||+.||++||++.||+++|+...
T Consensus       272 ----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~  312 (325)
T 3kul_A          272 ----RLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALI  312 (325)
T ss_dssp             ----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ----CCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence                01111223457889999999999999999999999998743

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=1.8e-41  Score=374.80  Aligned_cols=258  Identities=26%  Similarity=0.363  Sum_probs=208.8

Q ss_pred             HccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      ..++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+++|++++||||+++++++.+.+..++||
T Consensus       112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  191 (377)
T 3cbl_A          112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM  191 (377)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence            3468999999999999999999976 68999999987542 223457889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      ||+++|+|.+++...  ...+++..+..++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+++.....
T Consensus       192 e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~  266 (377)
T 3cbl_A          192 ELVQGGDFLTFLRTE--GARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADG  266 (377)
T ss_dssp             ECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECTTS
T ss_pred             EcCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---cCCcccCHHHEEEcCCCcEEECcCCCceecCCC
Confidence            999999999998532  235889999999999999999999998   999999999999999999999999999865433


Q ss_pred             cccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCcc
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT  709 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~  709 (795)
                      ..........+++.|+|||.+....++.++|||||||++|||++ |..|+........  ...    ......       
T Consensus       267 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~--~~~----~~~~~~-------  333 (377)
T 3cbl_A          267 VYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT--REF----VEKGGR-------  333 (377)
T ss_dssp             EEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHH--HHH----HHTTCC-------
T ss_pred             ceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH--HHH----HHcCCC-------
Confidence            22222222346788999999998899999999999999999998 9988875432211  111    111110       


Q ss_pred             ccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          710 LQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       710 l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                        ...+...+..+.+++.+||+.||++|||+.+|++.|+..
T Consensus       334 --~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  372 (377)
T 3cbl_A          334 --LPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI  372 (377)
T ss_dssp             --CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             --CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence              111122345678899999999999999999999999763

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=1.9e-40  Score=369.12  Aligned_cols=277  Identities=22%  Similarity=0.251  Sum_probs=216.0

Q ss_pred             HhHHHHccCCccccccCcCCcccEEEeEec-CcceEEEEEeccc---CccchHHHHHHHHHHHhcCCcccceeeeeeeec
Q 003786          468 ASVSAATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQ---SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL  543 (795)
Q Consensus       468 ~~i~~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  543 (795)
                      ..+....++|++.++||+|+||.||+|++. +++.||||++.+.   .....+.+.+|+.+++.++|||||++++++.+.
T Consensus        62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~  141 (410)
T 3v8s_A           62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD  141 (410)
T ss_dssp             HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence            344456689999999999999999999875 4889999999653   223345688999999999999999999999999


Q ss_pred             ceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccc
Q 003786          544 EEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGM  623 (795)
Q Consensus       544 ~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGl  623 (795)
                      +..++||||+++|+|.+++..    ..+++..+..++.||+.||.|||+++   |+||||||+||||+.++.+||+|||+
T Consensus       142 ~~~~lV~E~~~gg~L~~~l~~----~~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFG~  214 (410)
T 3v8s_A          142 RYLYMVMEYMPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGT  214 (410)
T ss_dssp             SEEEEEECCCTTEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTT
T ss_pred             CEEEEEEeCCCCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeeECCCCCEEEeccce
Confidence            999999999999999998843    34889999999999999999999998   99999999999999999999999999


Q ss_pred             ccccCCCcccccccccccccccccccccccCC----CCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccC
Q 003786          624 ARIFGGDELQSKTKRIVGTYGYMSPEYAQQGL----FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKD  699 (795)
Q Consensus       624 a~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~----~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~  699 (795)
                      ++....... ......+||+.|+|||++.+..    ++.++|||||||++|||++|+.||...+....  ....   ...
T Consensus       215 a~~~~~~~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~--~~~i---~~~  288 (410)
T 3v8s_A          215 CMKMNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT--YSKI---MNH  288 (410)
T ss_dssp             CEECCTTSE-EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHH--HHHH---HTH
T ss_pred             eEeeccCCc-ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhH--HHHH---Hhc
Confidence            987654332 2234578999999999997654    88999999999999999999999975442221  1110   000


Q ss_pred             cccccccCccccchhhHHHHHHHHHHHHhhccCCCCC--CCCHHHHHHHHcccc--------CCCCCCCCCCccc
Q 003786          700 DRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAAD--RPTMFEVVSMLTNKT--------INLPHPRQPAFSS  764 (795)
Q Consensus       700 ~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~--RPt~~evl~~L~~~~--------~~l~~p~~p~~~~  764 (795)
                      ......  +     ........+.++|.+||+.+|++  ||+++||++|.=...        ...+.|..|....
T Consensus       289 ~~~~~~--p-----~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~~w~~~~~~~~~~p~~p~~~~  356 (410)
T 3v8s_A          289 KNSLTF--P-----DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSS  356 (410)
T ss_dssp             HHHCCC--C-----TTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCSSCCSTTGGGSCCSCCCCCSS
T ss_pred             cccccC--C-----CcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccCCCHHHHhhcccCCCCCCcCCC
Confidence            000000  0     00112356788999999999998  999999999743221        2245566665443

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=4.2e-41  Score=361.72  Aligned_cols=261  Identities=28%  Similarity=0.381  Sum_probs=212.5

Q ss_pred             HHccCCccccccCcCCcccEEEeEe------cCcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecc
Q 003786          472 AATANFSTENKLGEGGFGPVYKGRL------LNGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELE  544 (795)
Q Consensus       472 ~~~~~~~~~~~LG~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  544 (795)
                      ...++|.+.+.||+|+||.||+|+.      .+++.||||++.... ....+.+.+|++++++++||||+++++++.+.+
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   99 (314)
T 2ivs_A           20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG   99 (314)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred             cchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC
Confidence            3457899999999999999999975      235789999997543 334567889999999999999999999999999


Q ss_pred             eeeEEeecCCCCChhhhhhccCC---------------------cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccC
Q 003786          545 EKILIYEYMPNKSLDFFLFDSTK---------------------ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDL  603 (795)
Q Consensus       545 ~~~lv~E~~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDi  603 (795)
                      ..++||||+++++|.+++.....                     ...+++..+..++.||++||.|||+++   |+||||
T Consensus       100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~di  176 (314)
T 2ivs_A          100 PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRDL  176 (314)
T ss_dssp             SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT---EECCCC
T ss_pred             ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC---Cccccc
Confidence            99999999999999999965432                     234888999999999999999999998   999999


Q ss_pred             CCCcEEECCCCCeeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCC
Q 003786          604 KASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFS  682 (795)
Q Consensus       604 kp~NIll~~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~  682 (795)
                      ||+||+++.++.+||+|||++................+++.|+|||.+.+..++.++|||||||++|||++ |..|+...
T Consensus       177 kp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~  256 (314)
T 2ivs_A          177 AARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI  256 (314)
T ss_dssp             SGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             chheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            99999999999999999999987654443333444567899999999999999999999999999999999 99998754


Q ss_pred             CCcchhHhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          683 NTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       683 ~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                      ......  ...    .....         ...+...+..+.+++.+||+.||++||++.||+++|+..
T Consensus       257 ~~~~~~--~~~----~~~~~---------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~  309 (314)
T 2ivs_A          257 PPERLF--NLL----KTGHR---------MERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM  309 (314)
T ss_dssp             CGGGHH--HHH----HTTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CHHHHH--HHh----hcCCc---------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            432221  111    11110         011122345788999999999999999999999999763

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=1.2e-40  Score=360.71  Aligned_cols=254  Identities=24%  Similarity=0.344  Sum_probs=201.5

Q ss_pred             HccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecce-----
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEE-----  545 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-----  545 (795)
                      ..++|++.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|+++|++++||||+++++++.+...     
T Consensus         4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~   83 (332)
T 3qd2_B            4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE   83 (332)
T ss_dssp             HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred             hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence            3467999999999999999999876 68999999996543 3345789999999999999999999999866542     


Q ss_pred             ----------------------------------------------------eeEEeecCCCCChhhhhhccCCcccCCh
Q 003786          546 ----------------------------------------------------KILIYEYMPNKSLDFFLFDSTKENLLGW  573 (795)
Q Consensus       546 ----------------------------------------------------~~lv~E~~~~gsL~~~l~~~~~~~~l~~  573 (795)
                                                                          .++||||+++++|.+++.........++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~  163 (332)
T 3qd2_B           84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREH  163 (332)
T ss_dssp             HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCH
T ss_pred             hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhh
Confidence                                                                7899999999999999976665556667


Q ss_pred             hhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccc----------cccccccccc
Q 003786          574 GTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ----------SKTKRIVGTY  643 (795)
Q Consensus       574 ~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~----------~~~~~~~gt~  643 (795)
                      ..+..++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+++........          .......||+
T Consensus       164 ~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  240 (332)
T 3qd2_B          164 GVCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK  240 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CG
T ss_pred             HHHHHHHHHHHHHHHHHHhCC---eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCc
Confidence            778999999999999999998   999999999999999999999999999876543211          1223457999


Q ss_pred             ccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhhHHHHHHHH
Q 003786          644 GYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYI  723 (795)
Q Consensus       644 ~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~  723 (795)
                      .|+|||++.+..++.++|||||||++|||++|..|+..    .......    ....         ............+.
T Consensus       241 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~----~~~~~~~----~~~~---------~~~~~~~~~~~~~~  303 (332)
T 3qd2_B          241 LYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME----RVRIITD----VRNL---------KFPLLFTQKYPQEH  303 (332)
T ss_dssp             GGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH----HHHHHHH----HHTT---------CCCHHHHHHCHHHH
T ss_pred             CccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH----HHHHHHH----hhcc---------CCCcccccCChhHH
Confidence            99999999999999999999999999999998765311    0000000    0000         11122333445678


Q ss_pred             HHHHhhccCCCCCCCCHHHHHHH
Q 003786          724 NVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       724 ~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      +++.+||+.||++|||+.|++++
T Consensus       304 ~li~~~l~~~p~~Rps~~~~l~~  326 (332)
T 3qd2_B          304 MMVQDMLSPSPTERPEATDIIEN  326 (332)
T ss_dssp             HHHHHHHCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHccCCCCcCCCHHHHhhc
Confidence            99999999999999999999985

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=4.4e-41  Score=370.27  Aligned_cols=259  Identities=29%  Similarity=0.400  Sum_probs=207.8

Q ss_pred             ccCCccccccCcCCcccEEEeEec------CcceEEEEEeccc-CccchHHHHHHHHHHHhcCCcccceeeeeeeeccee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL------NGQEVAVKRLSSQ-SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEK  546 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  546 (795)
                      .++|++.++||+|+||.||+|+..      +++.||||++... .......+.+|+.++++++||||+++++++.+....
T Consensus        70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~  149 (367)
T 3l9p_A           70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  149 (367)
T ss_dssp             GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            367999999999999999999842      4678999999654 334456788999999999999999999999999999


Q ss_pred             eEEeecCCCCChhhhhhccC----CcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCC---Ceeee
Q 003786          547 ILIYEYMPNKSLDFFLFDST----KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDM---NPKIS  619 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~---~vkL~  619 (795)
                      ++||||+++|+|.+++....    ....+++..+..++.||++||.|||+++   |+||||||+|||++.++   .+||+
T Consensus       150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kL~  226 (367)
T 3l9p_A          150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIG  226 (367)
T ss_dssp             EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred             EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEEecCCCCceEEEC
Confidence            99999999999999996543    2245888999999999999999999998   99999999999999655   49999


Q ss_pred             ccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhcc
Q 003786          620 DFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWK  698 (795)
Q Consensus       620 DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~  698 (795)
                      |||+++...............||+.|+|||++.+..++.++|||||||++|||++ |..||........  ....    .
T Consensus       227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~--~~~i----~  300 (367)
T 3l9p_A          227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV--LEFV----T  300 (367)
T ss_dssp             CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH--HHHH----H
T ss_pred             CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH--HHHH----H
Confidence            9999986533222223344568999999999999999999999999999999998 9999875432221  1111    1


Q ss_pred             CcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          699 DDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       699 ~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                      ....         ...+...+..+.+++.+||+.+|++||++.+|+++|+..
T Consensus       301 ~~~~---------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~  343 (367)
T 3l9p_A          301 SGGR---------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  343 (367)
T ss_dssp             TTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cCCC---------CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            1110         011112345678999999999999999999999998763

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=1.2e-40  Score=364.44  Aligned_cols=255  Identities=24%  Similarity=0.318  Sum_probs=205.1

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEeccc-----CccchHHHHHHHHHHHhcCCcccceeeeeeeecceee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQ-----SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKI  547 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  547 (795)
                      .++|++.+.||+|+||.||+|+.. +++.||||++...     .....+.+.+|+.++++++||||+++++++.+.+..+
T Consensus        23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  102 (351)
T 3c0i_A           23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY  102 (351)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            357999999999999999999864 5899999998542     1224678999999999999999999999999999999


Q ss_pred             EEeecCCCCChhhhhhccC-CcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCC---eeeecccc
Q 003786          548 LIYEYMPNKSLDFFLFDST-KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMN---PKISDFGM  623 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~---vkL~DFGl  623 (795)
                      +||||+++++|.+.+.... ....+++..+..++.||++||.|||+++   |+||||||+|||++.++.   +||+|||+
T Consensus       103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~  179 (351)
T 3c0i_A          103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGV  179 (351)
T ss_dssp             EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred             EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChHHeEEecCCCCCcEEEecCcc
Confidence            9999999999987775432 2345889999999999999999999998   999999999999987655   99999999


Q ss_pred             ccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccc
Q 003786          624 ARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAW  703 (795)
Q Consensus       624 a~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~  703 (795)
                      +........  ......||+.|+|||++.+..++.++|||||||++|+|++|..||.....   .......   . ... 
T Consensus       180 a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---~~~~~i~---~-~~~-  249 (351)
T 3c0i_A          180 AIQLGESGL--VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE---RLFEGII---K-GKY-  249 (351)
T ss_dssp             CEECCTTSC--BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH---HHHHHHH---H-TCC-
T ss_pred             eeEecCCCe--eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH---HHHHHHH---c-CCC-
Confidence            987654321  23345799999999999999999999999999999999999999975321   1111100   0 000 


Q ss_pred             cccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          704 ELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       704 ~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                           ..........+..+.+++.+||+.||++|||+.|++++
T Consensus       250 -----~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h  287 (351)
T 3c0i_A          250 -----KMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNH  287 (351)
T ss_dssp             -----CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             -----CCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence                 00011111234578899999999999999999999985

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=9.7e-41  Score=364.07  Aligned_cols=264  Identities=27%  Similarity=0.386  Sum_probs=209.9

Q ss_pred             HccCCccccccCcCCcccEEEeEe------cCcceEEEEEecccC-ccchHHHHHHHHHHHhc-CCcccceeeeeeeecc
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRL------LNGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELE  544 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~  544 (795)
                      ..++|++.+.||+|+||.||+|+.      .+++.||||++.... ....+.+.+|+.+|+++ +||||+++++++...+
T Consensus        43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~  122 (344)
T 1rjb_A           43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG  122 (344)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence            347899999999999999999985      246689999997542 34457899999999999 8999999999999999


Q ss_pred             eeeEEeecCCCCChhhhhhccCCc--------------------ccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCC
Q 003786          545 EKILIYEYMPNKSLDFFLFDSTKE--------------------NLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLK  604 (795)
Q Consensus       545 ~~~lv~E~~~~gsL~~~l~~~~~~--------------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDik  604 (795)
                      ..++||||+++++|.+++......                    ..+++..+..++.||+.||.|||+++   |+|||||
T Consensus       123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dik  199 (344)
T 1rjb_A          123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLA  199 (344)
T ss_dssp             SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEETTCS
T ss_pred             ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCC
Confidence            999999999999999999654321                    34788999999999999999999998   9999999


Q ss_pred             CCcEEECCCCCeeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCC
Q 003786          605 ASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSN  683 (795)
Q Consensus       605 p~NIll~~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~  683 (795)
                      |+|||++.++.+||+|||++................||+.|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus       200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~  279 (344)
T 1rjb_A          200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP  279 (344)
T ss_dssp             GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred             hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence            9999999999999999999986644332233344567889999999999999999999999999999998 999987654


Q ss_pred             CcchhHhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccccCC
Q 003786          684 TNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTIN  753 (795)
Q Consensus       684 ~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~~~  753 (795)
                      ..... ....    ....         ....+...+..+.+++.+||+.||.+||++.+|+++|......
T Consensus       280 ~~~~~-~~~~----~~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~  335 (344)
T 1rjb_A          280 VDANF-YKLI----QNGF---------KMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD  335 (344)
T ss_dssp             CSHHH-HHHH----HTTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred             cHHHH-HHHH----hcCC---------CCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence            32221 1111    1110         0011112345788899999999999999999999999875443

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=1.1e-41  Score=363.33  Aligned_cols=274  Identities=25%  Similarity=0.373  Sum_probs=205.9

Q ss_pred             ccCCccccccCcCCcccEEEeEe-----cCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeec--cee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRL-----LNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL--EEK  546 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~  546 (795)
                      .++|++.++||+|+||.||+|++     .+++.||||++........+.+.+|+++|++++||||+++++++...  ...
T Consensus         9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   88 (295)
T 3ugc_A            9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL   88 (295)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred             HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence            47899999999999999999973     35889999999876666667899999999999999999999998654  458


Q ss_pred             eEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          547 ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                      ++||||+++++|.+++...  ...+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++..
T Consensus        89 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~  163 (295)
T 3ugc_A           89 KLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKV  163 (295)
T ss_dssp             EEEEECCTTCBHHHHHHHC--GGGCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCSCC-
T ss_pred             EEEEEeCCCCCHHHHHHhc--ccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHhhEEEcCCCeEEEccCccccc
Confidence            9999999999999998543  234889999999999999999999998   99999999999999999999999999987


Q ss_pred             cCCCccc-ccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhH-hhhccCccccc
Q 003786          627 FGGDELQ-SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHA-WDLWKDDRAWE  704 (795)
Q Consensus       627 ~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~  704 (795)
                      ....... .......++..|+|||.+.+..++.++|||||||++|||++|..|+.............. ..........+
T Consensus       164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (295)
T 3ugc_A          164 LPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE  243 (295)
T ss_dssp             ------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHH
T ss_pred             ccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHH
Confidence            6433211 222334578889999999999999999999999999999999988754221100000000 00000000000


Q ss_pred             ccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccccC
Q 003786          705 LIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTI  752 (795)
Q Consensus       705 ~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~~  752 (795)
                      .+........+...+..+.+++.+||+.||++|||+.||++.|+....
T Consensus       244 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~  291 (295)
T 3ugc_A          244 LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD  291 (295)
T ss_dssp             HHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence            000111111222345678899999999999999999999999977543

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=1.6e-40  Score=354.26  Aligned_cols=259  Identities=26%  Similarity=0.409  Sum_probs=205.1

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCc---cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG---QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      .++|++.+.||+|+||.||+|+.. +++.||+|++.....   ...+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv   89 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV   89 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence            468999999999999999999864 588999999855332   2346788999999999999999999999999999999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      |||+++++|.+++..   ...+++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||++.....
T Consensus        90 ~e~~~g~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  163 (294)
T 4eqm_A           90 MEYIEGPTLSEYIES---HGPLSVDTAINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKALSE  163 (294)
T ss_dssp             EECCCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCSSSTTC--
T ss_pred             EeCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEEeCCCcccccc
Confidence            999999999999843   345899999999999999999999998   99999999999999999999999999987643


Q ss_pred             CcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcc
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT  709 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~  709 (795)
                      ... .......||+.|+|||.+.+..++.++|||||||++|+|++|+.||..........     ...... .     +.
T Consensus       164 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~-----~~~~~~-~-----~~  231 (294)
T 4eqm_A          164 TSL-TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAI-----KHIQDS-V-----PN  231 (294)
T ss_dssp             ------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHH-----HHHSSC-C-----CC
T ss_pred             ccc-cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHH-----HHhhcc-C-----CC
Confidence            321 22334679999999999999999999999999999999999999997543222111     000100 0     00


Q ss_pred             ccchhhHHHHHHHHHHHHhhccCCCCCCC-CHHHHHHHHccc
Q 003786          710 LQNEASYLILNRYINVGLLCVQEDAADRP-TMFEVVSMLTNK  750 (795)
Q Consensus       710 l~~~~~~~~~~~l~~li~~cL~~dP~~RP-t~~evl~~L~~~  750 (795)
                      .........+..+.+++.+||+.||++|| +++++.+.|...
T Consensus       232 ~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~  273 (294)
T 4eqm_A          232 VTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSV  273 (294)
T ss_dssp             HHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTS
T ss_pred             cchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHH
Confidence            11112223446788999999999999999 899999998773

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=1e-39  Score=360.02  Aligned_cols=251  Identities=22%  Similarity=0.313  Sum_probs=205.9

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      .++|++.+.||+|+||.||+++.. +++.||||++.+..   ....+.+.+|+++|+.++|||||++++++.+.+..++|
T Consensus        14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv   93 (384)
T 4fr4_A           14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV   93 (384)
T ss_dssp             GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence            478999999999999999999865 48889999986532   34457788999999999999999999999999999999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      |||+++|+|..++..   ...+++..+..++.||+.||.|||+.+   |+||||||+||||+.++.+||+|||+++....
T Consensus        94 ~e~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~  167 (384)
T 4fr4_A           94 VDLLLGGDLRYHLQQ---NVHFKEETVKLFICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPR  167 (384)
T ss_dssp             ECCCTTEEHHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             EecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEECCCCCEEEeccceeeeccC
Confidence            999999999999853   345899999999999999999999998   99999999999999999999999999987643


Q ss_pred             Cccccccccccccccccccccccc---CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCccccccc
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQ---GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELI  706 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~---~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i  706 (795)
                      ..   ......||+.|+|||++..   ..++.++|||||||++|||++|+.||.................   ..     
T Consensus       168 ~~---~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~---~~-----  236 (384)
T 4fr4_A          168 ET---QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFET---TV-----  236 (384)
T ss_dssp             TC---CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHH---CC-----
T ss_pred             CC---ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhh---cc-----
Confidence            32   2345789999999999864   4689999999999999999999999976543332211111000   00     


Q ss_pred             CccccchhhHHHHHHHHHHHHhhccCCCCCCCC-HHHHHHH
Q 003786          707 DPTLQNEASYLILNRYINVGLLCVQEDAADRPT-MFEVVSM  746 (795)
Q Consensus       707 d~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt-~~evl~~  746 (795)
                           ...+......+.+++.+||+.||++||+ +++|+++
T Consensus       237 -----~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~h  272 (384)
T 4fr4_A          237 -----VTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNF  272 (384)
T ss_dssp             -----CCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTS
T ss_pred             -----cCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcC
Confidence                 0011123457889999999999999998 7888764

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=8.6e-41  Score=370.07  Aligned_cols=268  Identities=27%  Similarity=0.365  Sum_probs=215.8

Q ss_pred             HccCCccccccCcCCcccEEEeEec--------CcceEEEEEecccC-ccchHHHHHHHHHHHhc-CCcccceeeeeeee
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL--------NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIE  542 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~  542 (795)
                      ..++|.+.++||+|+||.||+|+..        .++.||||++.... ....+.+.+|+++++++ +||||+++++++.+
T Consensus        67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~  146 (382)
T 3tt0_A           67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ  146 (382)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence            3478999999999999999999852        23579999997643 23446789999999999 99999999999999


Q ss_pred             cceeeEEeecCCCCChhhhhhccCC-------------cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEE
Q 003786          543 LEEKILIYEYMPNKSLDFFLFDSTK-------------ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNIL  609 (795)
Q Consensus       543 ~~~~~lv~E~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIl  609 (795)
                      .+..++||||+++++|.+++.....             ...+++..+..++.||+.||.|||+.+   |+||||||+|||
T Consensus       147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIl  223 (382)
T 3tt0_A          147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVL  223 (382)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEE
T ss_pred             CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCcceEE
Confidence            9999999999999999999965432             245899999999999999999999998   999999999999


Q ss_pred             ECCCCCeeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchh
Q 003786          610 LDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLT  688 (795)
Q Consensus       610 l~~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~  688 (795)
                      |+.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |..|+........ 
T Consensus       224 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~-  302 (382)
T 3tt0_A          224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL-  302 (382)
T ss_dssp             ECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH-
T ss_pred             EcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH-
Confidence            99999999999999987655443334445567899999999999999999999999999999999 9999875432221 


Q ss_pred             HhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccccCCCCCCC
Q 003786          689 LLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPR  758 (795)
Q Consensus       689 ~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~~~l~~p~  758 (795)
                       ...    .......         ..+......+.+++.+||+.+|++|||+.||+++|+......+...
T Consensus       303 -~~~----~~~~~~~---------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~  358 (382)
T 3tt0_A          303 -FKL----LKEGHRM---------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQE  358 (382)
T ss_dssp             -HHH----HHTTCCC---------CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSCC
T ss_pred             -HHH----HHcCCCC---------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcCC
Confidence             111    1111110         0111234568889999999999999999999999988544444433

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=1e-40  Score=363.54  Aligned_cols=264  Identities=27%  Similarity=0.388  Sum_probs=212.8

Q ss_pred             HHHccCCccccccCcCCcccEEEeEec------CcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeec
Q 003786          471 SAATANFSTENKLGEGGFGPVYKGRLL------NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL  543 (795)
Q Consensus       471 ~~~~~~~~~~~~LG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  543 (795)
                      ....++|++.+.||+|+||.||+|+..      +++.||||++.... ....+.+.+|+.++++++||||+++++++.+.
T Consensus        43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~  122 (343)
T 1luf_A           43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG  122 (343)
T ss_dssp             BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred             EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC
Confidence            345688999999999999999999864      34789999997643 23356789999999999999999999999999


Q ss_pred             ceeeEEeecCCCCChhhhhhccCC---------------------cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEecc
Q 003786          544 EEKILIYEYMPNKSLDFFLFDSTK---------------------ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRD  602 (795)
Q Consensus       544 ~~~~lv~E~~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrD  602 (795)
                      +..++||||+++++|.+++.....                     ...+++..+..++.||++||.|||+++   |+|||
T Consensus       123 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~---ivH~D  199 (343)
T 1luf_A          123 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHRD  199 (343)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSC
T ss_pred             CceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCC
Confidence            999999999999999999965321                     156889999999999999999999998   99999


Q ss_pred             CCCCcEEECCCCCeeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCC
Q 003786          603 LKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDF  681 (795)
Q Consensus       603 ikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~  681 (795)
                      |||+|||++.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |..||..
T Consensus       200 lkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~  279 (343)
T 1luf_A          200 LATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG  279 (343)
T ss_dssp             CSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred             CCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCC
Confidence            999999999999999999999987644333233344578999999999998899999999999999999999 9989865


Q ss_pred             CCCcchhHhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccccC
Q 003786          682 SNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTI  752 (795)
Q Consensus       682 ~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~~  752 (795)
                      ......  ...    .......         ..+...+..+.+++.+||+.+|++||++.+|+++|+....
T Consensus       280 ~~~~~~--~~~----~~~~~~~---------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~  335 (343)
T 1luf_A          280 MAHEEV--IYY----VRDGNIL---------ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE  335 (343)
T ss_dssp             SCHHHH--HHH----HHTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             CChHHH--HHH----HhCCCcC---------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHh
Confidence            432211  111    1111110         1112234578899999999999999999999999988543

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=3.5e-40  Score=371.05  Aligned_cols=254  Identities=22%  Similarity=0.296  Sum_probs=204.7

Q ss_pred             HccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      ..++|++.+.||+|+||.||+|... +++.+|+|++....  ....+.+.+|+.+|++++||||+++++++.+.+..++|
T Consensus         9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv   88 (444)
T 3soa_A            9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI   88 (444)
T ss_dssp             HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred             ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence            4578999999999999999999864 68999999986543  23346789999999999999999999999999999999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEEC---CCCCeeeeccccccc
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLD---KDMNPKISDFGMARI  626 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~---~~~~vkL~DFGla~~  626 (795)
                      |||+++|+|.+.+..   ...+++..+..++.||+.||.|||+++   |+||||||+|||++   .++.+||+|||++..
T Consensus        89 ~E~~~gg~L~~~i~~---~~~~~e~~~~~i~~qil~aL~~lH~~g---ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~  162 (444)
T 3soa_A           89 FDLVTGGELFEDIVA---REYYSEADASHCIQQILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLAIE  162 (444)
T ss_dssp             ECCCBCCBHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSSTTEEESBSSTTCCEEECCCSSCBC
T ss_pred             EEeCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEeccCCCCcEEEccCceeEE
Confidence            999999999888854   345899999999999999999999998   99999999999998   568899999999987


Q ss_pred             cCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCccccccc
Q 003786          627 FGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELI  706 (795)
Q Consensus       627 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i  706 (795)
                      .....  .......||+.|+|||++.+..++.++|||||||++|+|++|..||........  .....    .... ...
T Consensus       163 ~~~~~--~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~--~~~i~----~~~~-~~~  233 (444)
T 3soa_A          163 VEGEQ--QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRL--YQQIK----AGAY-DFP  233 (444)
T ss_dssp             CCTTC--CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHH----HTCC-CCC
T ss_pred             ecCCC--ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHH--HHHHH----hCCC-CCC
Confidence            65432  122346799999999999999999999999999999999999999865432221  11110    0000 000


Q ss_pred             CccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          707 DPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       707 d~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                           .......+..+.+++.+||+.||++|||+.|++++
T Consensus       234 -----~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h  268 (444)
T 3soa_A          234 -----SPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH  268 (444)
T ss_dssp             -----TTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             -----ccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence                 01111234567899999999999999999999986

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=4.6e-40  Score=350.27  Aligned_cols=263  Identities=22%  Similarity=0.288  Sum_probs=201.6

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccCc--cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG--QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      ++|++.++||+|+||.||+|+.. +++.||||++.....  ...+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            57999999999999999999875 588999999965432  234678899999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      |++++.+..+..   ....+++..+..++.||++||+|||+++   |+||||||+|||++.++.+||+|||+++......
T Consensus        82 ~~~~~l~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~lH~~~---ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~  155 (292)
T 3o0g_A           82 FCDQDLKKYFDS---CNGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIPV  155 (292)
T ss_dssp             CCSEEHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCSCC
T ss_pred             cCCCCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecCCcc
Confidence            998755554442   2345899999999999999999999998   9999999999999999999999999998764322


Q ss_pred             ccccccccccccccccccccccCC-CCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcc--ccccc--
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDR--AWELI--  706 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~~~-~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~i--  706 (795)
                        .......||+.|+|||++.+.. ++.++|||||||++|||++|..|+......... ............  .+..+  
T Consensus       156 --~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~  232 (292)
T 3o0g_A          156 --RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ-LKRIFRLLGTPTEEQWPSMTK  232 (292)
T ss_dssp             --SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHH-HHHHHHHHCCCCTTTCTTGGG
T ss_pred             --ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHH-HHHHHHHhCCCChhhhhhhcc
Confidence              2233457899999999987765 899999999999999999998886433322221 111111111000  00000  


Q ss_pred             -----------CccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          707 -----------DPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       707 -----------d~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                                 ...............+.+++.+||+.||++|||++|++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  283 (292)
T 3o0g_A          233 LPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH  283 (292)
T ss_dssp             STTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             cccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence                       0000011122344577899999999999999999999985

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=6.9e-41  Score=362.82  Aligned_cols=256  Identities=26%  Similarity=0.429  Sum_probs=199.9

Q ss_pred             ccCCccccccCcCCcccEEEeEec-Ccce----EEEEEeccc-CccchHHHHHHHHHHHhcCCcccceeeeeeeecceee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQE----VAVKRLSSQ-SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKI  547 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  547 (795)
                      .++|++.++||+|+||.||+|++. +++.    ||+|.+... .....+++.+|+.++++++||||+++++++.+.. .+
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~   92 (327)
T 3poz_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ   92 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred             HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence            367999999999999999999854 3444    588877543 3345678999999999999999999999998754 78


Q ss_pred             EEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccccc
Q 003786          548 LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF  627 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~  627 (795)
                      +|+||+++|+|.+++...  ...+++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++..
T Consensus        93 ~v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~  167 (327)
T 3poz_A           93 LITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL  167 (327)
T ss_dssp             EEEECCTTCBHHHHHHHS--TTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTHHHHH
T ss_pred             EEEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCChheEEECCCCCEEEccCcceeEc
Confidence            999999999999998543  345889999999999999999999998   999999999999999999999999999977


Q ss_pred             CCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCccccccc
Q 003786          628 GGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELI  706 (795)
Q Consensus       628 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i  706 (795)
                      .............+|+.|+|||++.+..++.++|||||||++|||++ |+.||+..........  .    ....     
T Consensus       168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~--~----~~~~-----  236 (327)
T 3poz_A          168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI--L----EKGE-----  236 (327)
T ss_dssp             TTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHH--H----HTTC-----
T ss_pred             cCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHH--H----HcCC-----
Confidence            65443333444567889999999999999999999999999999999 9999876543332111  1    0010     


Q ss_pred             CccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          707 DPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       707 d~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                          ....+......+.+++.+||+.+|++||++.|++++|+..
T Consensus       237 ----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~  276 (327)
T 3poz_A          237 ----RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM  276 (327)
T ss_dssp             ----CCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHH
T ss_pred             ----CCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence                0011122345678899999999999999999999998663

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=7.2e-41  Score=369.19  Aligned_cols=257  Identities=29%  Similarity=0.452  Sum_probs=196.5

Q ss_pred             ccCCccccccCcCCcccEEEeEec----CcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeE
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL----NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKIL  548 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  548 (795)
                      ..+|++.+.||+|+||.||+|++.    ++..||||++.... ....+.+.+|+.+|++++||||+++++++.+....++
T Consensus        44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  123 (373)
T 2qol_A           44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI  123 (373)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred             HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence            367999999999999999999864    47789999997542 3345679999999999999999999999999999999


Q ss_pred             EeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccC
Q 003786          549 IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      ||||+++++|.+++...  ...+++..+..++.||++||+|||+++   |+||||||+|||++.++.+||+|||+++...
T Consensus       124 v~e~~~~~sL~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~  198 (373)
T 2qol_A          124 VTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLE  198 (373)
T ss_dssp             EEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred             EEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEEcCCCCEEECcCccccccc
Confidence            99999999999999542  345889999999999999999999998   9999999999999999999999999998765


Q ss_pred             CCccc-ccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCccccccc
Q 003786          629 GDELQ-SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELI  706 (795)
Q Consensus       629 ~~~~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i  706 (795)
                      ..... .......+++.|+|||++.+..++.++|||||||++|||++ |+.||........  ....    ....     
T Consensus       199 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~--~~~i----~~~~-----  267 (373)
T 2qol_A          199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV--IKAV----DEGY-----  267 (373)
T ss_dssp             ---------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHH--HHHH----HTTE-----
T ss_pred             cCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHH--HHHH----HcCC-----
Confidence            33211 11222345778999999999999999999999999999998 9999865432211  1111    0110     


Q ss_pred             CccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          707 DPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       707 d~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                          ....+...+..+.+++.+||+.+|++||++.+|+++|+..
T Consensus       268 ----~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~  307 (373)
T 2qol_A          268 ----RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL  307 (373)
T ss_dssp             ----ECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ----CCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHH
Confidence                0111122345788999999999999999999999998764

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=1.5e-40  Score=352.19  Aligned_cols=255  Identities=27%  Similarity=0.400  Sum_probs=206.9

Q ss_pred             HccCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      ..++|++.+.||+|+||.||+++..+++.||||++.... ...+++.+|++++++++||||+++++++.+.+..++||||
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  100 (283)
T 3gen_A           22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY  100 (283)
T ss_dssp             CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred             CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence            357899999999999999999998888899999997543 3457899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      +++++|.+++...  ...+++..+..++.||++||.|||+++   |+||||||+||+++.++.+||+|||++........
T Consensus       101 ~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~  175 (283)
T 3gen_A          101 MANGCLLNYLREM--RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY  175 (283)
T ss_dssp             CTTCBHHHHHHCG--GGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHH
T ss_pred             cCCCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCccceEEEcCCCCEEEcccccccccccccc
Confidence            9999999998542  345899999999999999999999998   99999999999999999999999999987643321


Q ss_pred             cccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCcccc
Q 003786          633 QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQ  711 (795)
Q Consensus       633 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~  711 (795)
                       .......+|+.|+|||++.+..++.++||||||+++|+|++ |+.||........  ....    ....         .
T Consensus       176 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~--~~~~----~~~~---------~  239 (283)
T 3gen_A          176 -TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET--AEHI----AQGL---------R  239 (283)
T ss_dssp             -HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH--HHHH----HTTC---------C
T ss_pred             -ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHH--HHHH----hccc---------C
Confidence             22233456888999999998899999999999999999998 9999865432211  1111    0000         0


Q ss_pred             chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          712 NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       712 ~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      ...+......+.+++.+||+.+|++|||+.|++++|..
T Consensus       240 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~  277 (283)
T 3gen_A          240 LYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILD  277 (283)
T ss_dssp             CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHH
Confidence            00111123567889999999999999999999999875

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=3.5e-40  Score=362.24  Aligned_cols=252  Identities=22%  Similarity=0.309  Sum_probs=204.9

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      .++|++.+.||+|+||.||+|+.. +++.||||++....  ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~  107 (362)
T 2bdw_A           28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF  107 (362)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            467999999999999999999865 58999999996543  233467889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCC---Ceeeecccccccc
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDM---NPKISDFGMARIF  627 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~---~vkL~DFGla~~~  627 (795)
                      ||+++++|.+.+..   ...+++..+..++.||+.||.|||+++   |+||||||+|||++.++   .+||+|||++...
T Consensus       108 e~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~  181 (362)
T 2bdw_A          108 DLVTGGELFEDIVA---REFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEV  181 (362)
T ss_dssp             CCCCSCBHHHHHTT---CSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCC
T ss_pred             ecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEeecCcceEe
Confidence            99999999888843   346899999999999999999999998   99999999999998654   5999999999876


Q ss_pred             CCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccC
Q 003786          628 GGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID  707 (795)
Q Consensus       628 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id  707 (795)
                      ....   ......||+.|+|||++.+..++.++|||||||++|+|++|..||...+....  .....    .... .   
T Consensus       182 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~--~~~i~----~~~~-~---  248 (362)
T 2bdw_A          182 NDSE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL--YAQIK----AGAY-D---  248 (362)
T ss_dssp             TTCC---SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHH----HTCC-C---
T ss_pred             cCCc---ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHH--HHHHH----hCCC-C---
Confidence            5332   22346799999999999999999999999999999999999999865432211  11110    0000 0   


Q ss_pred             ccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          708 PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       708 ~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                        .........+..+.+++.+||+.||++||++.|++++
T Consensus       249 --~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  285 (362)
T 2bdw_A          249 --YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV  285 (362)
T ss_dssp             --CCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             --CCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence              0011112234567899999999999999999999986

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=8e-40  Score=349.57  Aligned_cols=260  Identities=27%  Similarity=0.351  Sum_probs=201.9

Q ss_pred             ccCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHh--cCCcccceeeeeeeec----ceee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAK--LQHRNLVRLLGCCIEL----EEKI  547 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~----~~~~  547 (795)
                      .++|++.+.||+|+||.||+|+. +++.||||++...   ....+.+|.+++..  ++||||+++++++...    ...+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~   82 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW   82 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred             cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence            47899999999999999999987 7899999998643   34566777777776  7999999999986653    4578


Q ss_pred             EEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHH--------hcCCCcEEeccCCCCcEEECCCCCeeee
Q 003786          548 LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH--------QYSRLRVIHRDLKASNILLDKDMNPKIS  619 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH--------~~~~~~iiHrDikp~NIll~~~~~vkL~  619 (795)
                      +||||+++|+|.+++.    ...+++..+..++.||+.||.|||        +.+   |+||||||+|||++.++.+||+
T Consensus        83 lv~e~~~~g~L~~~l~----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nill~~~~~~kl~  155 (301)
T 3q4u_A           83 LITHYHEMGSLYDYLQ----LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA---IAHRDLKSKNILVKKNGQCCIA  155 (301)
T ss_dssp             EEECCCTTCBHHHHHT----TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE---EECSCCCGGGEEECTTSCEEEC
T ss_pred             EehhhccCCCHHHHHh----hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC---eecCCCChHhEEEcCCCCEEEe
Confidence            9999999999999983    235889999999999999999999        665   9999999999999999999999


Q ss_pred             ccccccccCCCccc--ccccccccccccccccccccC------CCCcccchhhHHHHHHHHHhC----------CCCCCC
Q 003786          620 DFGMARIFGGDELQ--SKTKRIVGTYGYMSPEYAQQG------LFSIKSDVFSFGVLLLETLSS----------KRNTDF  681 (795)
Q Consensus       620 DFGla~~~~~~~~~--~~~~~~~gt~~y~APE~~~~~------~~~~k~DvwSlGvil~elltG----------~~p~~~  681 (795)
                      |||+++........  .......||+.|+|||++.+.      .++.++|||||||++|||++|          ..||..
T Consensus       156 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~  235 (301)
T 3q4u_A          156 DLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYD  235 (301)
T ss_dssp             CCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred             eCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccc
Confidence            99999865433221  112335799999999999876      456799999999999999999          777654


Q ss_pred             CCCcchhHhHhHhhhccCcccccccCccc-cchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          682 SNTNSLTLLGHAWDLWKDDRAWELIDPTL-QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       682 ~~~~~~~~~~~~~~~~~~~~~~~~id~~l-~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      ....................     .+.+ ...........+.+++.+||+.||++|||+.||++.|+.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~  299 (301)
T 3q4u_A          236 VVPNDPSFEDMRKVVCVDQQ-----RPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK  299 (301)
T ss_dssp             TSCSSCCHHHHHHHHTTSCC-----CCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred             cCCCCcchhhhhHHHhccCC-----CCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhc
Confidence            33222211111111111111     1111 112334567789999999999999999999999999975

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=5.3e-40  Score=368.35  Aligned_cols=264  Identities=20%  Similarity=0.229  Sum_probs=209.6

Q ss_pred             HHhHHHHccCCccccccCcCCcccEEEeEecC-cceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeee
Q 003786          467 LASVSAATANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIE  542 (795)
Q Consensus       467 ~~~i~~~~~~~~~~~~LG~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~  542 (795)
                      +..+....++|++.++||+|+||.||+|++.. ++.||||++.+..   ....+.+.+|+.++..++||||++++++|.+
T Consensus        66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~  145 (437)
T 4aw2_A           66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD  145 (437)
T ss_dssp             HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred             hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence            34445567899999999999999999999764 7889999996532   2233458999999999999999999999999


Q ss_pred             cceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccc
Q 003786          543 LEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFG  622 (795)
Q Consensus       543 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFG  622 (795)
                      .+..++|||||++|+|.+++...  ...+++..+..++.||+.||.|||+++   |+||||||+||||+.++.+||+|||
T Consensus       146 ~~~~~lV~Ey~~gg~L~~~l~~~--~~~l~e~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILl~~~g~vkL~DFG  220 (437)
T 4aw2_A          146 DNNLYLVMDYYVGGDLLTLLSKF--EDRLPEEMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFG  220 (437)
T ss_dssp             SSEEEEEECCCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCT
T ss_pred             CCEEEEEEecCCCCcHHHHHHHc--cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeeEcCCCCEEEcchh
Confidence            99999999999999999999542  345899999999999999999999998   9999999999999999999999999


Q ss_pred             cccccCCCcccccccccccccccccccccc-----cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhc
Q 003786          623 MARIFGGDELQSKTKRIVGTYGYMSPEYAQ-----QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLW  697 (795)
Q Consensus       623 la~~~~~~~~~~~~~~~~gt~~y~APE~~~-----~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~  697 (795)
                      +++....... ......+||+.|+|||++.     ...|+.++|||||||++|||++|+.||...+....  .....   
T Consensus       221 la~~~~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~--~~~i~---  294 (437)
T 4aw2_A          221 SCLKLMEDGT-VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET--YGKIM---  294 (437)
T ss_dssp             TCEECCTTSC-EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH--HHHHH---
T ss_pred             hhhhcccCCC-cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHH--HHhhh---
Confidence            9986643322 2233468999999999986     56789999999999999999999999975442221  11110   


Q ss_pred             cCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCC--CCCHHHHHHHH
Q 003786          698 KDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAAD--RPTMFEVVSML  747 (795)
Q Consensus       698 ~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~--RPt~~evl~~L  747 (795)
                      .....  ..-+..    .......+.++|.+||+.+|++  ||+++|++++-
T Consensus       295 ~~~~~--~~~p~~----~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hp  340 (437)
T 4aw2_A          295 NHKER--FQFPTQ----VTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHP  340 (437)
T ss_dssp             THHHH--CCCCSS----CCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSG
T ss_pred             hcccc--ccCCcc----cccCCHHHHHHHHHHhcccccccCCCCHHHHhCCC
Confidence            00000  000000    0112346778999999998888  99999999973

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=4.1e-40  Score=351.75  Aligned_cols=250  Identities=22%  Similarity=0.291  Sum_probs=196.8

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCc--------------------------cchHHHHHHHHHHH
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG--------------------------QGQEEFKNEIKLIA  526 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~  526 (795)
                      .++|++.+.||+|+||.||+|+.. +++.||||++.....                          ...+.+.+|+++|+
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            478999999999999999999864 588999999865421                          12356889999999


Q ss_pred             hcCCcccceeeeeeee--cceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCC
Q 003786          527 KLQHRNLVRLLGCCIE--LEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLK  604 (795)
Q Consensus       527 ~l~h~niv~l~~~~~~--~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDik  604 (795)
                      +++||||+++++++.+  ....++||||+++++|.+++    ....+++..+..++.||++||.|||+++   |+|||||
T Consensus        92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlk  164 (298)
T 2zv2_A           92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP----TLKPLSEDQARFYFQDLIKGIEYLHYQK---IIHRDIK  164 (298)
T ss_dssp             TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS----CSSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCC
T ss_pred             hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCC
Confidence            9999999999999986  56789999999999998765    2346899999999999999999999998   9999999


Q ss_pred             CCcEEECCCCCeeeeccccccccCCCcccccccccccccccccccccccCC---CCcccchhhHHHHHHHHHhCCCCCCC
Q 003786          605 ASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGL---FSIKSDVFSFGVLLLETLSSKRNTDF  681 (795)
Q Consensus       605 p~NIll~~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~---~~~k~DvwSlGvil~elltG~~p~~~  681 (795)
                      |+|||++.++.+||+|||++........  ......||+.|+|||++.+..   ++.++|||||||++|+|++|+.||..
T Consensus       165 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~  242 (298)
T 2zv2_A          165 PSNLLVGEDGHIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD  242 (298)
T ss_dssp             GGGEEECTTSCEEECCCTTCEECSSSSC--EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             HHHEEECCCCCEEEecCCCccccccccc--cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence            9999999999999999999987654321  223467999999999997654   47899999999999999999999865


Q ss_pred             CCCcchhHhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          682 SNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       682 ~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .....  ......    .... ..  +     .....+..+.+++.+||+.||++||++.|++++
T Consensus       243 ~~~~~--~~~~~~----~~~~-~~--~-----~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h  293 (298)
T 2zv2_A          243 ERIMC--LHSKIK----SQAL-EF--P-----DQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH  293 (298)
T ss_dssp             SSHHH--HHHHHH----HCCC-CC--C-----SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred             ccHHH--HHHHHh----cccC-CC--C-----CccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence            33211  111110    0000 00  0     011233567899999999999999999999874

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=3.1e-40  Score=350.98  Aligned_cols=262  Identities=23%  Similarity=0.319  Sum_probs=201.2

Q ss_pred             cCCccccccCcCCcccEEEeEecCcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      ++|++.++||+|+||.||+|+..+++.||||++....  ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence            5799999999999999999998779999999986543  23347788999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      +++ +|.+++...  ...+++..+..++.||++||.|||+++   |+||||||+|||++.++.+||+|||++....... 
T Consensus        82 ~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-  154 (288)
T 1ob3_A           82 LDQ-DLKKLLDVC--EGGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPV-  154 (288)
T ss_dssp             CSE-EHHHHHHTS--TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---
T ss_pred             cCC-CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEeECccccccCccc-
Confidence            986 887777432  345889999999999999999999998   9999999999999999999999999998764322 


Q ss_pred             ccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCc--------ccc
Q 003786          633 QSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDD--------RAW  703 (795)
Q Consensus       633 ~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~--------~~~  703 (795)
                       .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........  ...........        ...
T Consensus       155 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  231 (288)
T 1ob3_A          155 -RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ--LMRIFRILGTPNSKNWPNVTEL  231 (288)
T ss_dssp             --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHHHCCCCTTTSTTGGGS
T ss_pred             -cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHHCCCChhhchhhhcc
Confidence             12233578999999999876 4689999999999999999999999976442221  11111110000        000


Q ss_pred             cccCccc-------cchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          704 ELIDPTL-------QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       704 ~~id~~l-------~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ...++.+       ...........+.+++.+||+.||++|||+.|++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  281 (288)
T 1ob3_A          232 PKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH  281 (288)
T ss_dssp             TTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             cccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence            0011110       011112234577899999999999999999999975

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=2e-40  Score=361.17  Aligned_cols=252  Identities=24%  Similarity=0.325  Sum_probs=205.7

Q ss_pred             HHHccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhc-CCcccceeeeeeeecce
Q 003786          471 SAATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEE  545 (795)
Q Consensus       471 ~~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~  545 (795)
                      ....++|++.+.||+|+||.||+|+.. +++.||||++.+..   ....+.+..|..++..+ +||||+++++++.+.+.
T Consensus        13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~   92 (345)
T 1xjd_A           13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN   92 (345)
T ss_dssp             ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred             CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence            345689999999999999999999875 58899999997642   34456788999999887 89999999999999999


Q ss_pred             eeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccc
Q 003786          546 KILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR  625 (795)
Q Consensus       546 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~  625 (795)
                      .++||||+++|+|.+++..   ...+++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++
T Consensus        93 ~~lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~  166 (345)
T 1xjd_A           93 LFFVMEYLNGGDLMYHIQS---CHKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCK  166 (345)
T ss_dssp             EEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred             EEEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCChhhEEECCCCCEEEeEChhhh
Confidence            9999999999999999853   345889999999999999999999998   9999999999999999999999999998


Q ss_pred             ccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccc
Q 003786          626 IFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWEL  705 (795)
Q Consensus       626 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  705 (795)
                      ......  ......+||+.|+|||++.+..++.++|||||||++|||++|+.||...+....  ......  ..      
T Consensus       167 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~--~~~i~~--~~------  234 (345)
T 1xjd_A          167 ENMLGD--AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL--FHSIRM--DN------  234 (345)
T ss_dssp             CCCCTT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHH--CC------
T ss_pred             hcccCC--CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHH--HHHHHh--CC------
Confidence            643222  223457899999999999999999999999999999999999999975432211  111100  00      


Q ss_pred             cCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHH-HHHHH
Q 003786          706 IDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMF-EVVSM  746 (795)
Q Consensus       706 id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~-evl~~  746 (795)
                        +.+    +......+.+++.+||+.||++||++. +|+++
T Consensus       235 --~~~----p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~h  270 (345)
T 1xjd_A          235 --PFY----PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQH  270 (345)
T ss_dssp             --CCC----CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred             --CCC----CcccCHHHHHHHHHHhcCCHhHcCCChHHHHcC
Confidence              001    111335678899999999999999998 88765

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=5.5e-40  Score=353.92  Aligned_cols=246  Identities=25%  Similarity=0.312  Sum_probs=205.4

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      .++|++.+.||+|+||.||+++.. +++.||||++.+..   ....+.+.+|+.+++.++||||+++++++.+....++|
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv   84 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI   84 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence            467999999999999999999875 58999999997542   23456788999999999999999999999999999999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      |||+++++|.+++..   ...+++..+..++.||+.||.|||+++   |+||||||+|||++.+|.+||+|||+++....
T Consensus        85 ~e~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~  158 (318)
T 1fot_A           85 MDYIEGGELFSLLRK---SQRFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPD  158 (318)
T ss_dssp             ECCCCSCBHHHHHHH---TSSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSCEECSS
T ss_pred             EeCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChheEEEcCCCCEEEeecCcceecCC
Confidence            999999999999854   345889999999999999999999988   99999999999999999999999999987542


Q ss_pred             CcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcc
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT  709 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~  709 (795)
                      .     ....+||+.|+|||++.+..++.++|||||||++|||++|+.||...+....  ....   .... .      .
T Consensus       159 ~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--~~~i---~~~~-~------~  221 (318)
T 1fot_A          159 V-----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT--YEKI---LNAE-L------R  221 (318)
T ss_dssp             C-----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH--HHHH---HHCC-C------C
T ss_pred             c-----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH--HHHH---HhCC-C------C
Confidence            2     3346899999999999999999999999999999999999999965432111  1111   0100 0      0


Q ss_pred             ccchhhHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHH
Q 003786          710 LQNEASYLILNRYINVGLLCVQEDAADRP-----TMFEVVSM  746 (795)
Q Consensus       710 l~~~~~~~~~~~l~~li~~cL~~dP~~RP-----t~~evl~~  746 (795)
                          .+......+.+++.+||+.||++||     +++||++|
T Consensus       222 ----~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h  259 (318)
T 1fot_A          222 ----FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH  259 (318)
T ss_dssp             ----CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred             ----CCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence                1112335678899999999999999     89999986

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=4.2e-40  Score=353.36  Aligned_cols=265  Identities=26%  Similarity=0.412  Sum_probs=206.1

Q ss_pred             ccCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecC
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYM  553 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  553 (795)
                      .++|++.+.||+|+||.||+|+. .++.||||++...  ...+.+.+|+++|++++||||+++++++.  +..++||||+
T Consensus         7 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~   81 (307)
T 2eva_A            7 YKEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYA   81 (307)
T ss_dssp             GGGEEEEEEEECCSSSEEEEEEE-TTEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECC
T ss_pred             HhHeeeeeEeecCCCceEEEEEE-CCeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcC
Confidence            36789999999999999999987 4788999998643  34577999999999999999999999887  4589999999


Q ss_pred             CCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCC-eeeeccccccccCCCcc
Q 003786          554 PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMN-PKISDFGMARIFGGDEL  632 (795)
Q Consensus       554 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~-vkL~DFGla~~~~~~~~  632 (795)
                      ++++|.+++........+++..+..++.||++||.|||+.+..+|+||||||+|||++.++. +||+|||++......  
T Consensus        82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~--  159 (307)
T 2eva_A           82 EGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH--  159 (307)
T ss_dssp             TTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---------
T ss_pred             CCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc--
Confidence            99999999976555556788899999999999999999943334999999999999998887 799999999765322  


Q ss_pred             cccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccc
Q 003786          633 QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQN  712 (795)
Q Consensus       633 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~  712 (795)
                         .....||+.|+|||++.+..++.++|||||||++|||++|+.||+.............   .. ....     .   
T Consensus       160 ---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~---~~-~~~~-----~---  224 (307)
T 2eva_A          160 ---MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAV---HN-GTRP-----P---  224 (307)
T ss_dssp             --------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHH---HT-TCCC-----C---
T ss_pred             ---cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHH---hc-CCCC-----C---
Confidence               2234689999999999999999999999999999999999999975443332221111   01 1100     1   


Q ss_pred             hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccccCCCCCCCCCC
Q 003786          713 EASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPRQPA  761 (795)
Q Consensus       713 ~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~~~l~~p~~p~  761 (795)
                       .....+..+.+++.+||+.+|++|||+.|++++|+......+.+..|.
T Consensus       225 -~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~~~~  272 (307)
T 2eva_A          225 -LIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPL  272 (307)
T ss_dssp             -CBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCCTTSCC
T ss_pred             -cccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccCCCCcc
Confidence             111233567889999999999999999999999988665555554443

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=7.5e-40  Score=362.14  Aligned_cols=253  Identities=22%  Similarity=0.304  Sum_probs=207.7

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      .++|++.+.||+|+||.||+|... +++.||+|++..........+.+|+.+|++++||||+++++++.+....++||||
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~  129 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  129 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence            468999999999999999999865 5889999999766555567899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECC--CCCeeeeccccccccCCC
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDK--DMNPKISDFGMARIFGGD  630 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~--~~~vkL~DFGla~~~~~~  630 (795)
                      +++++|.+++...  ...+++..+..++.||+.||.|||+++   |+||||||+|||++.  ++.+||+|||+++.....
T Consensus       130 ~~gg~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~  204 (387)
T 1kob_A          130 LSGGELFDRIAAE--DYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD  204 (387)
T ss_dssp             CCCCBHHHHTTCT--TCCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT
T ss_pred             CCCCcHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccchHHeEEecCCCCceEEEecccceecCCC
Confidence            9999999988432  335899999999999999999999998   999999999999974  578999999999876543


Q ss_pred             cccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccc
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL  710 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l  710 (795)
                      ..   .....||+.|+|||++.+..++.++|||||||++|||++|..||.......  ........    . .. .+   
T Consensus       205 ~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~--~~~~i~~~----~-~~-~~---  270 (387)
T 1kob_A          205 EI---VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE--TLQNVKRC----D-WE-FD---  270 (387)
T ss_dssp             SC---EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH--HHHHHHHC----C-CC-CC---
T ss_pred             cc---eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHH--HHHHHHhC----C-CC-CC---
Confidence            32   233579999999999999999999999999999999999999997543211  11111000    0 00 01   


Q ss_pred             cchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       711 ~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                       .......+..+.++|.+||+.||++|||+.|++++
T Consensus       271 -~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h  305 (387)
T 1kob_A          271 -EDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH  305 (387)
T ss_dssp             -SSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             -ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence             11112234567899999999999999999999986

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=8.8e-40  Score=354.55  Aligned_cols=259  Identities=18%  Similarity=0.183  Sum_probs=207.2

Q ss_pred             ccCCccccccCcCCcccEEEeEe-cCcceEEEEEecccCccchHHHHHHHHHHHhc-CCcccceeeeeeeecceeeEEee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      .++|++.+.||+|+||.||+|+. .+++.||||++....  ..+.+.+|+++++++ +||||+++++++...+..++|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e   85 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE   85 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred             cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence            46899999999999999999986 468999999986542  345689999999999 99999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCC-----eeeeccccccc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMN-----PKISDFGMARI  626 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~-----vkL~DFGla~~  626 (795)
                      |+ +++|.+++...  ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.     +||+|||+++.
T Consensus        86 ~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~---iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~  159 (330)
T 2izr_A           86 LL-GPSLEDLFDLC--DRTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKE  159 (330)
T ss_dssp             CC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEE
T ss_pred             eC-CCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeeccCCCCCCceEEEEEccccee
Confidence            99 99999998543  346899999999999999999999998   999999999999998887     99999999987


Q ss_pred             cCCCcccc-----cccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcc
Q 003786          627 FGGDELQS-----KTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDR  701 (795)
Q Consensus       627 ~~~~~~~~-----~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~  701 (795)
                      +.......     ......||+.|+|||++.+..++.++|||||||++|||++|+.||.................   ..
T Consensus       160 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~---~~  236 (330)
T 2izr_A          160 YIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGD---TK  236 (330)
T ss_dssp             SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHH---HH
T ss_pred             eecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHh---hh
Confidence            64332211     12456899999999999999999999999999999999999999986543322111110000   00


Q ss_pred             cccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          702 AWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       702 ~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      ...  .   ........+ .+.+++..||+.+|.+||++++|++.|+.
T Consensus       237 ~~~--~---~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~  278 (330)
T 2izr_A          237 RAT--P---IEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTD  278 (330)
T ss_dssp             HHS--C---HHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHH
T ss_pred             ccC--C---HHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHH
Confidence            000  0   000001123 78899999999999999999999998865

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=2.7e-40  Score=347.79  Aligned_cols=253  Identities=31%  Similarity=0.452  Sum_probs=196.8

Q ss_pred             ccCCccccccCcCCcccEEEeEecCcceEEEEEecccCc----cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSG----QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      .++|++.+.||+|+||.||+|++ .++.||||++.....    ...+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV   84 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred             hhheeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence            46899999999999999999987 488999999865432    3356789999999999999999999999999999999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECC--------CCCeeeecc
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDK--------DMNPKISDF  621 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~--------~~~vkL~DF  621 (795)
                      |||+++++|.+++.    ...+++..+..++.|+++||.|||+++..+|+||||||+||+++.        ++.+||+||
T Consensus        85 ~e~~~~~~L~~~~~----~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df  160 (271)
T 3dtc_A           85 MEFARGGPLNRVLS----GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF  160 (271)
T ss_dssp             EECCTTEEHHHHHT----SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred             EEcCCCCCHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence            99999999999883    345889999999999999999999987555899999999999986        778999999


Q ss_pred             ccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcc
Q 003786          622 GMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDR  701 (795)
Q Consensus       622 Gla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~  701 (795)
                      |++.......    .....||+.|+|||.+.+..++.++||||||+++|+|++|+.||..........     .......
T Consensus       161 g~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~-----~~~~~~~  231 (271)
T 3dtc_A          161 GLAREWHRTT----KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAY-----GVAMNKL  231 (271)
T ss_dssp             CC-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHH-----HHHTSCC
T ss_pred             Cccccccccc----ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-----hhhcCCC
Confidence            9998654332    223578999999999999999999999999999999999999997543222111     0001110


Q ss_pred             cccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          702 AWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       702 ~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                               ....+...+..+.+++.+||+.+|++|||+.|++++|+.
T Consensus       232 ---------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~  270 (271)
T 3dtc_A          232 ---------ALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT  270 (271)
T ss_dssp             ---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred             ---------CCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence                     011112234578899999999999999999999999975

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=5.2e-40  Score=359.05  Aligned_cols=250  Identities=23%  Similarity=0.301  Sum_probs=205.1

Q ss_pred             HccCCccccccCcCCcccEEEeEecC-cceEEEEEeccc---CccchHHHHHHHHHHHhc-CCcccceeeeeeeecceee
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQ---SGQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEEKI  547 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~  547 (795)
                      ..++|++.+.||+|+||.||+|+... ++.||||++.+.   .....+.+.+|..+|..+ +||||+++++++.+.+..+
T Consensus        18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~   97 (353)
T 2i0e_A           18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY   97 (353)
T ss_dssp             -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred             chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence            45789999999999999999998764 889999999754   234456788999999988 7999999999999999999


Q ss_pred             EEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccccc
Q 003786          548 LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF  627 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~  627 (795)
                      +||||+++|+|.+++..   ...+++..+..++.||+.||.|||+++   |+||||||+|||++.+|.+||+|||+++..
T Consensus        98 lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~  171 (353)
T 2i0e_A           98 FVMEYVNGGDLMYHIQQ---VGRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEN  171 (353)
T ss_dssp             EEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred             EEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEEcCCCcEEEEeCCccccc
Confidence            99999999999999853   245899999999999999999999998   999999999999999999999999999864


Q ss_pred             CCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccC
Q 003786          628 GGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID  707 (795)
Q Consensus       628 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id  707 (795)
                      ....  ......+||+.|+|||++.+..++.++|||||||++|||++|+.||...+....  .....   . ...     
T Consensus       172 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~--~~~i~---~-~~~-----  238 (353)
T 2i0e_A          172 IWDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL--FQSIM---E-HNV-----  238 (353)
T ss_dssp             CCTT--CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHH---H-CCC-----
T ss_pred             ccCC--cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHH--HHHHH---h-CCC-----
Confidence            3221  223457899999999999999999999999999999999999999975432211  11110   0 000     


Q ss_pred             ccccchhhHHHHHHHHHHHHhhccCCCCCCCC-----HHHHHHH
Q 003786          708 PTLQNEASYLILNRYINVGLLCVQEDAADRPT-----MFEVVSM  746 (795)
Q Consensus       708 ~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt-----~~evl~~  746 (795)
                           ..+......+.+++.+||+.||++||+     +++|+++
T Consensus       239 -----~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h  277 (353)
T 2i0e_A          239 -----AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH  277 (353)
T ss_dssp             -----CCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred             -----CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence                 011123457789999999999999995     5888876

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=2.1e-40  Score=356.11  Aligned_cols=262  Identities=27%  Similarity=0.351  Sum_probs=212.4

Q ss_pred             HccCCccccccCcCCcccEEEeEe------cCcceEEEEEecccCc-cchHHHHHHHHHHHhc-CCcccceeeeeeeecc
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRL------LNGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELE  544 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~  544 (795)
                      ..++|++.+.||+|+||.||+|+.      .+++.||||++..... ...+.+.+|+.+++++ +||||+++++++.+.+
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~  100 (313)
T 1t46_A           21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG  100 (313)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence            346899999999999999999974      3468899999975533 3457789999999999 9999999999999999


Q ss_pred             eeeEEeecCCCCChhhhhhccCC---------------cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEE
Q 003786          545 EKILIYEYMPNKSLDFFLFDSTK---------------ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNIL  609 (795)
Q Consensus       545 ~~~lv~E~~~~gsL~~~l~~~~~---------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIl  609 (795)
                      ..++||||+++++|.+++.....               ...+++..+..++.||++||.|||+++   |+||||||+||+
T Consensus       101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil  177 (313)
T 1t46_A          101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNIL  177 (313)
T ss_dssp             SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEE
T ss_pred             CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEE
Confidence            99999999999999999865432               124889999999999999999999998   999999999999


Q ss_pred             ECCCCCeeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchh
Q 003786          610 LDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLT  688 (795)
Q Consensus       610 l~~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~  688 (795)
                      ++.++.+||+|||++................+|+.|+|||.+.+..++.++|||||||++|||++ |..|+.........
T Consensus       178 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~  257 (313)
T 1t46_A          178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF  257 (313)
T ss_dssp             EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHH
T ss_pred             EcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHH
Confidence            99999999999999987654433333344567889999999999999999999999999999998 99998765433221


Q ss_pred             HhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcccc
Q 003786          689 LLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKT  751 (795)
Q Consensus       689 ~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~  751 (795)
                      . .....    ..         ....+...+..+.+++.+||+.||++|||+.|++++|+...
T Consensus       258 ~-~~~~~----~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  306 (313)
T 1t46_A          258 Y-KMIKE----GF---------RMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI  306 (313)
T ss_dssp             H-HHHHH----TC---------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             H-HHhcc----CC---------CCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence            1 11100    00         00011123456789999999999999999999999997643

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=9.6e-41  Score=360.80  Aligned_cols=261  Identities=25%  Similarity=0.373  Sum_probs=193.8

Q ss_pred             HHccCCccccccCcCCcccEEEeEecC-cc---eEEEEEeccc--CccchHHHHHHHHHHHhcCCcccceeeeeeeecce
Q 003786          472 AATANFSTENKLGEGGFGPVYKGRLLN-GQ---EVAVKRLSSQ--SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEE  545 (795)
Q Consensus       472 ~~~~~~~~~~~LG~G~~g~Vy~~~~~~-~~---~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  545 (795)
                      ...++|++.+.||+|+||.||+|+... ++   .||||++...  .....+.+.+|++++++++||||+++++++.....
T Consensus        20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   99 (323)
T 3qup_A           20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA   99 (323)
T ss_dssp             CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred             cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence            345789999999999999999998654 32   7999999754  33445789999999999999999999999988766


Q ss_pred             e------eEEeecCCCCChhhhhhccCC---cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCe
Q 003786          546 K------ILIYEYMPNKSLDFFLFDSTK---ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNP  616 (795)
Q Consensus       546 ~------~lv~E~~~~gsL~~~l~~~~~---~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~v  616 (795)
                      .      ++||||+++++|.+++.....   ...+++..+..++.||++||.|||+.+   |+||||||+|||++.++.+
T Consensus       100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~Dikp~NIli~~~~~~  176 (323)
T 3qup_A          100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMTV  176 (323)
T ss_dssp             -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCE
T ss_pred             ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC---cccCCCCcceEEEcCCCCE
Confidence            5      899999999999999854322   225889999999999999999999998   9999999999999999999


Q ss_pred             eeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhh
Q 003786          617 KISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWD  695 (795)
Q Consensus       617 kL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~  695 (795)
                      ||+|||+++...............+++.|+|||.+.+..++.++|||||||++|||++ |..||.........  ...  
T Consensus       177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~--~~~--  252 (323)
T 3qup_A          177 CVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIY--NYL--  252 (323)
T ss_dssp             EECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH--HHH--
T ss_pred             EEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHH--HHH--
Confidence            9999999987654433333334567889999999999999999999999999999999 89888754432221  111  


Q ss_pred             hccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          696 LWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       696 ~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                        .....         ...+...+..+.+++.+||+.||++|||+.++++.|+..
T Consensus       253 --~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~  296 (323)
T 3qup_A          253 --IGGNR---------LKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENI  296 (323)
T ss_dssp             --HTTCC---------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             --hcCCC---------CCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence              00100         011122335688999999999999999999999998774

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=2.4e-40  Score=359.19  Aligned_cols=248  Identities=24%  Similarity=0.345  Sum_probs=203.6

Q ss_pred             ccCCccccccCcCCcccEEEeEe-cCcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          474 TANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      .++|++.+.||+|+||.||+|++ .+++.||||++.+..   ......+.+|+.+|+.++||||+++++++.+.+..++|
T Consensus         8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv   87 (336)
T 3h4j_B            8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV   87 (336)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            47899999999999999999986 468999999986532   23346789999999999999999999999999999999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      |||+ +|+|.+++..   ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++.....
T Consensus        88 ~E~~-~g~l~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~  160 (336)
T 3h4j_B           88 IEYA-GGELFDYIVE---KKRMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTD  160 (336)
T ss_dssp             ECCC-CEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCSTTTEEECTTCCEEECCSSCTBTTTT
T ss_pred             EECC-CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCchhhEEEcCCCCEEEEEeccceeccC
Confidence            9999 6788777743   345899999999999999999999998   99999999999999999999999999987654


Q ss_pred             CcccccccccccccccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCc
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQGLF-SIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP  708 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~~~~-~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~  708 (795)
                      ..   .....+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||+........               ..+..
T Consensus       161 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~---------------~~i~~  222 (336)
T 3h4j_B          161 GN---FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF---------------KKVNS  222 (336)
T ss_dssp             SB---TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCB---------------CCCCS
T ss_pred             Cc---ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHH---------------HHHHc
Confidence            33   2344679999999999988776 78999999999999999999999754322210               00000


Q ss_pred             cccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          709 TLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       709 ~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                      . ....+...+..+.+++.+||+.||.+|||+.|++++-
T Consensus       223 ~-~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp  260 (336)
T 3h4j_B          223 C-VYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDP  260 (336)
T ss_dssp             S-CCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCH
T ss_pred             C-CCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhCh
Confidence            0 0011222345678899999999999999999999863

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=1.4e-39  Score=355.51  Aligned_cols=263  Identities=21%  Similarity=0.224  Sum_probs=213.4

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      .++|++.+.||+|+||.||+|+.. +++.||||++.+..   ....+.+.+|+.+|++++||||+++++++.+.+..++|
T Consensus        40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv  119 (350)
T 1rdq_E           40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV  119 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence            468999999999999999999875 58999999996542   23457788999999999999999999999999999999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      |||+++++|.+++...   ..+++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++....
T Consensus       120 ~e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~  193 (350)
T 1rdq_E          120 MEYVAGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG  193 (350)
T ss_dssp             EECCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred             EcCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCccceEEECCCCCEEEcccccceeccC
Confidence            9999999999998542   45889999999999999999999998   99999999999999999999999999987643


Q ss_pred             CcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcc
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT  709 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~  709 (795)
                      .     ....+||+.|+|||++.+..++.++|||||||++|||++|+.||........  ....    .....      .
T Consensus       194 ~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~--~~~i----~~~~~------~  256 (350)
T 1rdq_E          194 R-----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI--YEKI----VSGKV------R  256 (350)
T ss_dssp             C-----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHH----HHCCC------C
T ss_pred             C-----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHH--HHHH----HcCCC------C
Confidence            2     2346899999999999999999999999999999999999999975432111  1111    00110      0


Q ss_pred             ccchhhHHHHHHHHHHHHhhccCCCCCCCC-----HHHHHHHHccc--------cCCCCCCCCCCcc
Q 003786          710 LQNEASYLILNRYINVGLLCVQEDAADRPT-----MFEVVSMLTNK--------TINLPHPRQPAFS  763 (795)
Q Consensus       710 l~~~~~~~~~~~l~~li~~cL~~dP~~RPt-----~~evl~~L~~~--------~~~l~~p~~p~~~  763 (795)
                          .+......+.+++.+||+.||++||+     ++||+++--..        ...++.|..|.+.
T Consensus       257 ----~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~~w~~~~~~~~~~p~~p~~~  319 (350)
T 1rdq_E          257 ----FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK  319 (350)
T ss_dssp             ----CCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCC
T ss_pred             ----CCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCCCCHHHHhhccCCCCCCCCCC
Confidence                11123456789999999999999998     89998864221        2245566666543

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=4.9e-40  Score=358.51  Aligned_cols=255  Identities=20%  Similarity=0.284  Sum_probs=203.7

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCc---cchHHHHHHHHHHHhc-CCcccceeeeeeeecceeeE
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG---QGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEEKIL  548 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l  548 (795)
                      .++|++.+.||+|+||.||+|+.. +++.||||++.+...   ...+.+.+|..+++++ +||||+++++++.+.+..++
T Consensus         8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l   87 (345)
T 3a8x_A            8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF   87 (345)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence            467999999999999999999875 588999999976432   2345688999999988 89999999999999999999


Q ss_pred             EeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccC
Q 003786          549 IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      ||||+++|+|..++..   ...+++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++...
T Consensus        88 v~e~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~  161 (345)
T 3a8x_A           88 VIEYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL  161 (345)
T ss_dssp             EECCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCGGGCBCSC
T ss_pred             EEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEEecccccccc
Confidence            9999999999998853   345899999999999999999999998   9999999999999999999999999998643


Q ss_pred             CCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchh---HhHhHhhhccCcccccc
Q 003786          629 GDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLT---LLGHAWDLWKDDRAWEL  705 (795)
Q Consensus       629 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~  705 (795)
                      ...  ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.........   ..............   
T Consensus       162 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~---  236 (345)
T 3a8x_A          162 RPG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI---  236 (345)
T ss_dssp             CTT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC---
T ss_pred             CCC--CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC---
Confidence            221  2234568999999999999999999999999999999999999999653221110   00000000000000   


Q ss_pred             cCccccchhhHHHHHHHHHHHHhhccCCCCCCCCH------HHHHHH
Q 003786          706 IDPTLQNEASYLILNRYINVGLLCVQEDAADRPTM------FEVVSM  746 (795)
Q Consensus       706 id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~------~evl~~  746 (795)
                             ..+......+.+++.+||+.||++||++      .|+++|
T Consensus       237 -------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h  276 (345)
T 3a8x_A          237 -------RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH  276 (345)
T ss_dssp             -------CCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred             -------CCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence                   0111234567889999999999999995      688776

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=2.1e-40  Score=375.33  Aligned_cols=258  Identities=28%  Similarity=0.398  Sum_probs=210.4

Q ss_pred             HccCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      ..++|++.++||+|+||.||+|++.+++.||||++.... ...+.+.+|+.+|++++||||+++++++. .+..++||||
T Consensus       186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~  263 (454)
T 1qcf_A          186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEF  263 (454)
T ss_dssp             CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECC
T ss_pred             chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEee
Confidence            457799999999999999999998888899999997543 45788999999999999999999999986 6678999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      +++|+|.+++.... ...+++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++.......
T Consensus       264 ~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~  339 (454)
T 1qcf_A          264 MAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEY  339 (454)
T ss_dssp             CTTCBHHHHHHSHH-HHTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHH
T ss_pred             cCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCce
Confidence            99999999995432 235788899999999999999999998   99999999999999999999999999987643321


Q ss_pred             cccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCcccc
Q 003786          633 QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQ  711 (795)
Q Consensus       633 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~  711 (795)
                       .......+++.|+|||++....++.++|||||||++|||++ |+.||........  ......    ..         .
T Consensus       340 -~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~--~~~i~~----~~---------~  403 (454)
T 1qcf_A          340 -TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV--IRALER----GY---------R  403 (454)
T ss_dssp             -HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH--HHHHHH----TC---------C
T ss_pred             -eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHH--HHHHHc----CC---------C
Confidence             11223456789999999998999999999999999999999 9999875432221  111100    00         0


Q ss_pred             chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccccC
Q 003786          712 NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTI  752 (795)
Q Consensus       712 ~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~~  752 (795)
                      ...+...+..+.+++.+||+.||++|||+++|+++|+....
T Consensus       404 ~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~  444 (454)
T 1qcf_A          404 MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT  444 (454)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred             CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence            11112234578899999999999999999999999988543

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=5.2e-41  Score=363.67  Aligned_cols=275  Identities=27%  Similarity=0.360  Sum_probs=211.0

Q ss_pred             ccCCccccccCcCCcccEEEeEe-----cCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeee--eccee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRL-----LNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCI--ELEEK  546 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~  546 (795)
                      .++|++.+.||+|+||.||++++     .+++.||||++........+.+.+|++++++++||||+++++++.  +....
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  101 (327)
T 3lxl_A           22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL  101 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred             hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence            36799999999999999999983     358899999998776666678999999999999999999999887  45668


Q ss_pred             eEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          547 ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                      ++||||+++++|.+++...  ...+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++..
T Consensus       102 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~  176 (327)
T 3lxl_A          102 RLVMEYLPSGCLRDFLQRH--RARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKL  176 (327)
T ss_dssp             EEEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCGGGCEE
T ss_pred             EEEEeecCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChhhEEECCCCCEEEccccccee
Confidence            8999999999999998542  235899999999999999999999998   99999999999999999999999999987


Q ss_pred             cCCCcc-cccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccc
Q 003786          627 FGGDEL-QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWEL  705 (795)
Q Consensus       627 ~~~~~~-~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  705 (795)
                      ...... ........||+.|+|||++.+..++.++|||||||++|+|++|+.|+........................+.
T Consensus       177 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (327)
T 3lxl_A          177 LPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLEL  256 (327)
T ss_dssp             CCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHH
T ss_pred             cccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHH
Confidence            653322 1223345688899999999999999999999999999999999998754221110000000000000000111


Q ss_pred             cCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccccCC
Q 003786          706 IDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTIN  753 (795)
Q Consensus       706 id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~~~  753 (795)
                      +........+...+..+.+++.+||+.||++|||+.|++++|+.....
T Consensus       257 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~  304 (327)
T 3lxl_A          257 LEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSG  304 (327)
T ss_dssp             HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC---
T ss_pred             hhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence            111111122233456788999999999999999999999999875443

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=4.5e-40  Score=376.38  Aligned_cols=257  Identities=27%  Similarity=0.403  Sum_probs=211.9

Q ss_pred             ccCCccccccCcCCcccEEEeEecC-cceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      ..+|++.++||+|+||.||+|++.. ++.||||++.... ...+++.+|+.+|++++||||+++++++.+....++||||
T Consensus       219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~  297 (495)
T 1opk_A          219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF  297 (495)
T ss_dssp             GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence            4678999999999999999998765 8899999996543 4567899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      +++|+|.+++.... ...+++..+..++.||+.||.|||+++   |+||||||+||||+.++.+||+|||+++.......
T Consensus       298 ~~~g~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  373 (495)
T 1opk_A          298 MTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY  373 (495)
T ss_dssp             CTTCBHHHHHHHSC-TTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECCTTCEECCTTCCE
T ss_pred             cCCCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEECCCCcEEEeecccceeccCCce
Confidence            99999999996432 345889999999999999999999998   99999999999999999999999999987654332


Q ss_pred             cccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCcccc
Q 003786          633 QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQ  711 (795)
Q Consensus       633 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~  711 (795)
                       .......+++.|+|||++....++.++|||||||++|||++ |..|+........  ....    ...         ..
T Consensus       374 -~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~--~~~~----~~~---------~~  437 (495)
T 1opk_A          374 -TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV--YELL----EKD---------YR  437 (495)
T ss_dssp             -ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH--HHHH----HTT---------CC
T ss_pred             -eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHH--HHHH----HcC---------CC
Confidence             22233456789999999999999999999999999999999 8888876443221  1111    111         11


Q ss_pred             chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcccc
Q 003786          712 NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKT  751 (795)
Q Consensus       712 ~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~  751 (795)
                      ...+..++..+.+++.+||+.+|++|||+.+|++.|+...
T Consensus       438 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~  477 (495)
T 1opk_A          438 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF  477 (495)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred             CCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence            1122234467889999999999999999999999998743

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=2.3e-40  Score=361.12  Aligned_cols=254  Identities=25%  Similarity=0.319  Sum_probs=197.7

Q ss_pred             HccCCccccccCcCCcccEEEeEecCcceEEEEEecccC--ccchHHHHHHHHHHHhcCC--cccceeeeeeeecceeeE
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQH--RNLVRLLGCCIELEEKIL  548 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~l  548 (795)
                      ..++|++.+.||+|+||.||++...+++.||||++....  ....+.+.+|+.+|++++|  |||+++++++.+....++
T Consensus         7 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l   86 (343)
T 3dbq_A            7 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM   86 (343)
T ss_dssp             SSCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             ecCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEE
Confidence            456799999999999999999998889999999986542  2334678999999999986  999999999999999999


Q ss_pred             EeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccC
Q 003786          549 IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      ||| +.+++|.+++..   ...+++..+..++.||++||.|||+++   |+||||||+|||++ ++.+||+|||+++...
T Consensus        87 v~e-~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~~~---iiHrDikp~NIll~-~~~~kl~DFG~a~~~~  158 (343)
T 3dbq_A           87 VME-CGNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQ  158 (343)
T ss_dssp             EEC-CCSEEHHHHHHH---SCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE-TTEEEECCCSSSCCC-
T ss_pred             EEe-CCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEE-CCcEEEeecccccccC
Confidence            999 578899999854   345889999999999999999999998   99999999999997 6789999999998765


Q ss_pred             CCccccccccccccccccccccccc-----------CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhc
Q 003786          629 GDELQSKTKRIVGTYGYMSPEYAQQ-----------GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLW  697 (795)
Q Consensus       629 ~~~~~~~~~~~~gt~~y~APE~~~~-----------~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~  697 (795)
                      ............||+.|+|||++.+           ..++.++|||||||++|||++|+.||.........+.    .. 
T Consensus       159 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~----~~-  233 (343)
T 3dbq_A          159 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH----AI-  233 (343)
T ss_dssp             -----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHH----HH-
T ss_pred             cccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHH----HH-
Confidence            4433333345679999999999864           6789999999999999999999999964322211111    11 


Q ss_pred             cCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          698 KDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       698 ~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                              +++......+......+.+++.+||+.||++|||+.|++++.
T Consensus       234 --------~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp  275 (343)
T 3dbq_A          234 --------IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP  275 (343)
T ss_dssp             --------HCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred             --------hcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCc
Confidence                    111111111111234677899999999999999999999874

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=1.7e-39  Score=342.55  Aligned_cols=255  Identities=25%  Similarity=0.330  Sum_probs=207.6

Q ss_pred             HccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      ..++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus         5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   84 (276)
T 2yex_A            5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL   84 (276)
T ss_dssp             HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence            3478999999999999999999875 68999999986543 234578899999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      ||+++++|.+++.   ....+++..+..++.||++||.|||+.+   |+||||||+||+++.++.+||+|||++......
T Consensus        85 e~~~~~~L~~~l~---~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~  158 (276)
T 2yex_A           85 EYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYN  158 (276)
T ss_dssp             ECCTTEEGGGGSB---TTTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred             EecCCCcHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCChHHEEEccCCCEEEeeCCCccccCCC
Confidence            9999999999884   3345889999999999999999999998   999999999999999999999999999865433


Q ss_pred             cccccccccccccccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcc
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQQGLF-SIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT  709 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~~~~~-~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~  709 (795)
                      ..........|++.|+|||++.+..+ +.++||||||+++|+|++|+.||..............     ....  ..   
T Consensus       159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-----~~~~--~~---  228 (276)
T 2yex_A          159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK-----EKKT--YL---  228 (276)
T ss_dssp             TEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHH-----TTCT--TS---
T ss_pred             cchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhh-----hccc--cc---
Confidence            32233345679999999999987665 7899999999999999999999976554332222111     0000  00   


Q ss_pred             ccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          710 LQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       710 l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                         .........+.+++.+||+.||++|||+.|++++
T Consensus       229 ---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  262 (276)
T 2yex_A          229 ---NPWKKIDSAPLALLHKILVENPSARITIPDIKKD  262 (276)
T ss_dssp             ---TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             ---CchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence               0111234567789999999999999999999874

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=1.2e-39  Score=361.99  Aligned_cols=270  Identities=18%  Similarity=0.231  Sum_probs=206.2

Q ss_pred             HccCCccccccCcC--CcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecceee
Q 003786          473 ATANFSTENKLGEG--GFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKI  547 (795)
Q Consensus       473 ~~~~~~~~~~LG~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  547 (795)
                      ..++|++.++||+|  +||.||+|+.. +++.||||++....  ....+.+.+|+.++++++|||||++++++.+.+..+
T Consensus        23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~  102 (389)
T 3gni_B           23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW  102 (389)
T ss_dssp             CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence            45789999999999  99999999875 68999999997543  233467889999999999999999999999999999


Q ss_pred             EEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccccc
Q 003786          548 LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF  627 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~  627 (795)
                      +||||+++++|.+++.... ...+++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||++...
T Consensus       103 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~kl~dfg~~~~~  178 (389)
T 3gni_B          103 VVTSFMAYGSAKDLICTHF-MDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSM  178 (389)
T ss_dssp             EEEECCTTCBHHHHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred             EEEEccCCCCHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccccceee
Confidence            9999999999999985432 245889999999999999999999998   999999999999999999999999998654


Q ss_pred             CCCc-----cccccccccccccccccccccc--CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhc---
Q 003786          628 GGDE-----LQSKTKRIVGTYGYMSPEYAQQ--GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLW---  697 (795)
Q Consensus       628 ~~~~-----~~~~~~~~~gt~~y~APE~~~~--~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~---  697 (795)
                      ....     .........||+.|+|||++.+  ..++.++|||||||++|||++|+.||..................   
T Consensus       179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~  258 (389)
T 3gni_B          179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLL  258 (389)
T ss_dssp             EETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC---------
T ss_pred             ccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccc
Confidence            2111     1112233478999999999987  67999999999999999999999999765433321110000000   


Q ss_pred             cC-----cc-------------cccccC---c------cccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          698 KD-----DR-------------AWELID---P------TLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       698 ~~-----~~-------------~~~~id---~------~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ..     ..             ....+.   +      .............+.+++.+||+.||++|||+.|++++
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h  334 (389)
T 3gni_B          259 DTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH  334 (389)
T ss_dssp             -----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             cccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence            00     00             000000   0      00001222344568899999999999999999999986

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=2.9e-40  Score=373.90  Aligned_cols=262  Identities=28%  Similarity=0.421  Sum_probs=206.8

Q ss_pred             HccCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      ..++|++.++||+|+||.||+|++..+..||||++.... ...+.+.+|+++|++++||||+++++++.+ +..++||||
T Consensus       182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~  259 (452)
T 1fmk_A          182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY  259 (452)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred             ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehh
Confidence            346789999999999999999998877889999997543 346789999999999999999999999876 778999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      +++|+|.+++... ....+++..+..++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+++.......
T Consensus       260 ~~~gsL~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~  335 (452)
T 1fmk_A          260 MSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY  335 (452)
T ss_dssp             CTTCBHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCTTC-------
T ss_pred             hcCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEECCCCCEEECCCccceecCCCce
Confidence            9999999999532 2245889999999999999999999998   99999999999999999999999999987653322


Q ss_pred             cccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCcccc
Q 003786          633 QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQ  711 (795)
Q Consensus       633 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~  711 (795)
                       .......+++.|+|||.+....++.++|||||||++|||++ |+.|+........  ....    ..+.         .
T Consensus       336 -~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~--~~~i----~~~~---------~  399 (452)
T 1fmk_A          336 -TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV--LDQV----ERGY---------R  399 (452)
T ss_dssp             --------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH--HHHH----HTTC---------C
T ss_pred             -ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHH--HHHH----HcCC---------C
Confidence             12223456889999999998999999999999999999999 8988865432211  1111    1110         0


Q ss_pred             chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccccCCCCC
Q 003786          712 NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPH  756 (795)
Q Consensus       712 ~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~~~l~~  756 (795)
                      ...+...+..+.+++.+||+.+|++|||+++|+++|+......+.
T Consensus       400 ~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~~  444 (452)
T 1fmk_A          400 MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP  444 (452)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCC
T ss_pred             CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCCc
Confidence            111223445788999999999999999999999999886544433

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=3.1e-40  Score=357.40  Aligned_cols=255  Identities=26%  Similarity=0.354  Sum_probs=202.6

Q ss_pred             cCCccccccCcCCcccEEEeEec-Ccce----EEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeE
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQE----VAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKIL  548 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  548 (795)
                      ++|++.+.||+|+||.||+|++. +++.    ||+|.+.... ....+.+.+|+.++++++||||+++++++. .+..++
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~   91 (325)
T 3kex_A           13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL   91 (325)
T ss_dssp             TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred             hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence            67999999999999999999864 4554    7777775432 334467889999999999999999999885 567899


Q ss_pred             EeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccC
Q 003786          549 IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      ||||+++++|.+++...  ...+++..+..++.||++||.|||+.+   |+||||||+|||++.++.+||+|||+++...
T Consensus        92 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~  166 (325)
T 3kex_A           92 VTQYLPLGSLLDHVRQH--RGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLP  166 (325)
T ss_dssp             EEECCTTCBSHHHHHSS--GGGSCTTHHHHHHHHHHHHHHHHHHTT---CCCSCCSSTTEEESSSSCEEECSCSGGGGSC
T ss_pred             EEEeCCCCCHHHHHHHc--cccCCHHHHHHHHHHHHHHHHHHHhCC---CCCCccchheEEECCCCeEEECCCCcccccC
Confidence            99999999999998543  346889999999999999999999998   9999999999999999999999999999875


Q ss_pred             CCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccC
Q 003786          629 GDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID  707 (795)
Q Consensus       629 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id  707 (795)
                      ............|++.|+|||++.+..++.++|||||||++|||++ |+.||............      ......  . 
T Consensus       167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~------~~~~~~--~-  237 (325)
T 3kex_A          167 PDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLL------EKGERL--A-  237 (325)
T ss_dssp             CCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHH------HTTCBC--C-
T ss_pred             cccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHH------HcCCCC--C-
Confidence            5443334445678889999999999999999999999999999999 99999765433321111      111000  0 


Q ss_pred             ccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          708 PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       708 ~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                            .+......+.+++.+||+.||++||++.|++++|...
T Consensus       238 ------~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~  274 (325)
T 3kex_A          238 ------QPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRM  274 (325)
T ss_dssp             ------CCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHH
T ss_pred             ------CCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence                  0111223566899999999999999999999999774

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=1e-39  Score=351.96  Aligned_cols=265  Identities=25%  Similarity=0.360  Sum_probs=190.9

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      .++|++.++||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   83 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE   83 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence            468999999999999999999865 58999999986543 2345778999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccC---CcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccC
Q 003786          552 YMPNKSLDFFLFDST---KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      |++ ++|.+++....   ....+++..+..++.||++||.|||+.+   |+||||||+|||++.++.+||+|||+++...
T Consensus        84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~  159 (317)
T 2pmi_A           84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFG  159 (317)
T ss_dssp             CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred             ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence            998 58888875432   1235888999999999999999999998   9999999999999999999999999998764


Q ss_pred             CCccccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhcc--Cccccc-
Q 003786          629 GDELQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWK--DDRAWE-  704 (795)
Q Consensus       629 ~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~-  704 (795)
                      ...  .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.........  ........  ....+. 
T Consensus       160 ~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~--~~i~~~~~~~~~~~~~~  235 (317)
T 2pmi_A          160 IPV--NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQL--KLIFDIMGTPNESLWPS  235 (317)
T ss_dssp             SCC--CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH--HHHHHHHCSCCTTTCGG
T ss_pred             CCc--ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH--HHHHHHhCCCChhHhhh
Confidence            322  12234578999999999876 46899999999999999999999999765432211  11101000  000000 


Q ss_pred             -----ccCccc------------cchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          705 -----LIDPTL------------QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       705 -----~id~~l------------~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                           ...+.+            ...........+.+++.+||+.||++|||+.|++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h  294 (317)
T 2pmi_A          236 VTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH  294 (317)
T ss_dssp             GGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             hhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence                 000000            000111234578899999999999999999999875

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=8e-40  Score=364.32  Aligned_cols=263  Identities=20%  Similarity=0.219  Sum_probs=208.4

Q ss_pred             HHhHHHHccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeee
Q 003786          467 LASVSAATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIE  542 (795)
Q Consensus       467 ~~~i~~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~  542 (795)
                      +..+....++|++.+.||+|+||.||+++.. +++.||||++.+..   ....+.+.+|..++.+++||||+++++++.+
T Consensus        53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~  132 (412)
T 2vd5_A           53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD  132 (412)
T ss_dssp             HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred             hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence            4444556789999999999999999999875 68999999996532   2234568899999999999999999999999


Q ss_pred             cceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccc
Q 003786          543 LEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFG  622 (795)
Q Consensus       543 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFG  622 (795)
                      .+..++||||+++|+|..++...  ...+++..+..++.||+.||.|||+++   |+||||||+|||++.++++||+|||
T Consensus       133 ~~~~~lVmE~~~gg~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILld~~g~vkL~DFG  207 (412)
T 2vd5_A          133 ENYLYLVMEYYVGGDLLTLLSKF--GERIPAEMARFYLAEIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLADFG  207 (412)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHH--SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCT
T ss_pred             CCEEEEEEcCCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccCHHHeeecCCCCEEEeech
Confidence            99999999999999999999542  235889999999999999999999998   9999999999999999999999999


Q ss_pred             cccccCCCcccccccccccccccccccccc-------cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhh
Q 003786          623 MARIFGGDELQSKTKRIVGTYGYMSPEYAQ-------QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWD  695 (795)
Q Consensus       623 la~~~~~~~~~~~~~~~~gt~~y~APE~~~-------~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~  695 (795)
                      +++....... ......+||+.|+|||++.       ...|+.++|||||||++|||++|+.||...+....  ....  
T Consensus       208 la~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~--~~~i--  282 (412)
T 2vd5_A          208 SCLKLRADGT-VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAET--YGKI--  282 (412)
T ss_dssp             TCEECCTTSC-EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH--HHHH--
T ss_pred             hheeccCCCc-cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHH--HHHH--
Confidence            9987654322 1223468999999999987       35789999999999999999999999975442221  1110  


Q ss_pred             hccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCC---CCHHHHHHHH
Q 003786          696 LWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADR---PTMFEVVSML  747 (795)
Q Consensus       696 ~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~R---Pt~~evl~~L  747 (795)
                       ......  ..-+.    .....+..+.++|.+||+ +|++|   |+++||++|-
T Consensus       283 -~~~~~~--~~~p~----~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hp  329 (412)
T 2vd5_A          283 -VHYKEH--LSLPL----VDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHP  329 (412)
T ss_dssp             -HTHHHH--CCCC--------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSG
T ss_pred             -HhcccC--cCCCc----cccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCC
Confidence             000000  00010    112234577899999999 99998   6999999873

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=9.4e-40  Score=358.72  Aligned_cols=254  Identities=23%  Similarity=0.240  Sum_probs=194.3

Q ss_pred             HccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      ..++|++.+.||+|+||.||+++.. +++.||||++.... ...+.+.+|+.++++++||||+++++++.+....++|||
T Consensus        18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e   96 (361)
T 3uc3_A           18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME   96 (361)
T ss_dssp             CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence            3478999999999999999999875 68899999996543 345678999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCC--eeeeccccccccCC
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMN--PKISDFGMARIFGG  629 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~--vkL~DFGla~~~~~  629 (795)
                      |+++++|.+++..   .+.+++..+..++.||+.||.|||+++   |+||||||+|||++.++.  +||+|||+++....
T Consensus        97 ~~~~~~L~~~l~~---~~~~~~~~~~~i~~ql~~~L~~LH~~~---ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~  170 (361)
T 3uc3_A           97 YASGGELYERICN---AGRFSEDEARFFFQQLLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL  170 (361)
T ss_dssp             CCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCSCCCCGGGEEECSSSSCCEEECCCCCC-----
T ss_pred             eCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCceEEEeecCccccccc
Confidence            9999999998843   345899999999999999999999998   999999999999987765  99999999974322


Q ss_pred             CcccccccccccccccccccccccCCCCcc-cchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCc
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQGLFSIK-SDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP  708 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k-~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~  708 (795)
                      .   .......||+.|+|||++.+..++.+ +|||||||++|+|++|+.||........... ..........       
T Consensus       171 ~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~-~~~~~~~~~~-------  239 (361)
T 3uc3_A          171 H---SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRK-TIQRILSVKY-------  239 (361)
T ss_dssp             -------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHH-HHHHHHTTCC-------
T ss_pred             c---CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHH-HHHHHhcCCC-------
Confidence            2   22334579999999999988877655 8999999999999999999976543222111 0001100000       


Q ss_pred             cccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          709 TLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       709 ~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                        ...........+.+++.+||+.||++|||+.|+++|
T Consensus       240 --~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h  275 (361)
T 3uc3_A          240 --SIPDDIRISPECCHLISRIFVADPATRISIPEIKTH  275 (361)
T ss_dssp             --CCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             --CCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence              000001123567899999999999999999999986

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=6e-39  Score=340.55  Aligned_cols=254  Identities=27%  Similarity=0.486  Sum_probs=204.1

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccc-------hHHHHHHHHHHHhcCCcccceeeeeeeecce
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQG-------QEEFKNEIKLIAKLQHRNLVRLLGCCIELEE  545 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  545 (795)
                      .++|++.+.||+|+||.||+|+.. +++.||||++.......       .+.+.+|++++++++||||+++++++.+.. 
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-   96 (287)
T 4f0f_A           18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-   96 (287)
T ss_dssp             STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred             hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence            478999999999999999999864 68999999986543222       267899999999999999999999986655 


Q ss_pred             eeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCC-----eeeec
Q 003786          546 KILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMN-----PKISD  620 (795)
Q Consensus       546 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~-----vkL~D  620 (795)
                       ++||||+++++|.+++...  ...+++..+..++.|++.||.|||+++ .+|+||||||+|||++.++.     +||+|
T Consensus        97 -~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~-~~ivH~dikp~Nil~~~~~~~~~~~~kl~D  172 (287)
T 4f0f_A           97 -RMVMEFVPCGDLYHRLLDK--AHPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVAD  172 (287)
T ss_dssp             -EEEEECCTTCBHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred             -eEEEEecCCCCHHHHHhcc--cCCccHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence             6999999999998887543  346899999999999999999999875 34999999999999988876     99999


Q ss_pred             cccccccCCCcccccccccccccccccccccc--cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhcc
Q 003786          621 FGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ--QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWK  698 (795)
Q Consensus       621 FGla~~~~~~~~~~~~~~~~gt~~y~APE~~~--~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~  698 (795)
                      ||+++....     ......||+.|+|||++.  ...++.++|||||||++|||++|+.||.................  
T Consensus       173 fg~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~--  245 (287)
T 4f0f_A          173 FGLSQQSVH-----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREE--  245 (287)
T ss_dssp             CTTCBCCSS-----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHS--
T ss_pred             CCccccccc-----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhcc--
Confidence            999985432     233467999999999984  45688999999999999999999999976554443322221111  


Q ss_pred             CcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          699 DDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       699 ~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                       .         .....+...+..+.+++.+||+.||++|||++|+++.|+.
T Consensus       246 -~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~  286 (287)
T 4f0f_A          246 -G---------LRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE  286 (287)
T ss_dssp             -C---------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred             -C---------CCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence             0         0111122234578899999999999999999999999875

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=1.2e-39  Score=356.19  Aligned_cols=252  Identities=21%  Similarity=0.291  Sum_probs=190.5

Q ss_pred             HccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      ..++|++.+.||+|+||.||+|+.. +++.||||++....  ..+.+.+|+++|++++||||+++++++.+.+..++|||
T Consensus        51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  128 (349)
T 2w4o_A           51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE  128 (349)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence            4578999999999999999999876 47889999997542  44678899999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECC---CCCeeeeccccccccC
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDK---DMNPKISDFGMARIFG  628 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~---~~~vkL~DFGla~~~~  628 (795)
                      |+++++|.+++..   ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.   ++.+||+|||+++...
T Consensus       129 ~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~  202 (349)
T 2w4o_A          129 LVTGGELFDRIVE---KGYYSERDAADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE  202 (349)
T ss_dssp             CCCSCBHHHHHTT---CSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESSSSTTCCEEECCCC------
T ss_pred             eCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCcccEEEecCCCCCCEEEccCccccccC
Confidence            9999999998843   345899999999999999999999998   999999999999975   8899999999998754


Q ss_pred             CCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCc
Q 003786          629 GDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP  708 (795)
Q Consensus       629 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~  708 (795)
                      ...   ......||+.|+|||++.+..++.++|||||||++|||++|..||............ .   .. ... ...  
T Consensus       203 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~-i---~~-~~~-~~~--  271 (349)
T 2w4o_A          203 HQV---LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRR-I---LN-CEY-YFI--  271 (349)
T ss_dssp             -------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHH-H---HT-TCC-CCC--
T ss_pred             ccc---ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHH-H---Hh-CCC-ccC--
Confidence            322   223467999999999999999999999999999999999999998654432211111 1   00 000 000  


Q ss_pred             cccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          709 TLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       709 ~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                         ..........+.+++.+||+.||++|||+.|++++
T Consensus       272 ---~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  306 (349)
T 2w4o_A          272 ---SPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH  306 (349)
T ss_dssp             ---TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             ---CchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence               11112234567899999999999999999999985

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=3.1e-40  Score=355.03  Aligned_cols=255  Identities=24%  Similarity=0.311  Sum_probs=195.6

Q ss_pred             ccCCccccccCcCCcccEEEeEe-cCcceEEEEEecccCcc---chHHHHHHHHHHHhcCCcccceeeeeeeeccee---
Q 003786          474 TANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQ---GQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEK---  546 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~---  546 (795)
                      .++|++.+.||+|+||.||+|++ .+++.||||++......   ....+.+|++++++++||||+++++++......   
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~   90 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   90 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred             cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence            47899999999999999999986 46899999999764322   235788999999999999999999998876644   


Q ss_pred             -eEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccc
Q 003786          547 -ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR  625 (795)
Q Consensus       547 -~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~  625 (795)
                       ++||||+++++|.+++..   ...+++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||++.
T Consensus        91 ~~lv~e~~~g~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~a~  164 (311)
T 3ork_A           91 PYIVMEYVDGVTLRDIVHT---EGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIAR  164 (311)
T ss_dssp             EEEEEECCCEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEETTSCEEECCCSCC-
T ss_pred             cEEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEcCCCCEEEeeccCcc
Confidence             999999999999999853   345889999999999999999999998   9999999999999999999999999998


Q ss_pred             ccCCCcc-cccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCccccc
Q 003786          626 IFGGDEL-QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWE  704 (795)
Q Consensus       626 ~~~~~~~-~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  704 (795)
                      ....... ........||+.|+|||++.+..++.++|||||||++|||++|+.||...........     ........ 
T Consensus       165 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~-----~~~~~~~~-  238 (311)
T 3ork_A          165 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ-----HVREDPIP-  238 (311)
T ss_dssp             -----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH-----HHHCCCCC-
T ss_pred             cccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHH-----HhcCCCCC-
Confidence            6643321 1223345799999999999999999999999999999999999999975442221111     01111000 


Q ss_pred             ccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          705 LIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       705 ~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                            ........+..+.+++.+||+.||++||++.+++++
T Consensus       239 ------~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~  274 (311)
T 3ork_A          239 ------PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRA  274 (311)
T ss_dssp             ------HHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred             ------cccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHH
Confidence                  001111234568899999999999999977776654

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=1.7e-39  Score=358.12  Aligned_cols=249  Identities=27%  Similarity=0.349  Sum_probs=198.6

Q ss_pred             ccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCCCC
Q 003786          478 STENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNK  556 (795)
Q Consensus       478 ~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g  556 (795)
                      ...+.||+|+||.||+|+.. +++.||||++........+.+.+|+++|++++||||+++++++.+.+..++||||++++
T Consensus        92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~  171 (373)
T 2x4f_A           92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG  171 (373)
T ss_dssp             EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred             ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence            33678999999999999864 58999999998766566788999999999999999999999999999999999999999


Q ss_pred             ChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEE--CCCCCeeeeccccccccCCCcccc
Q 003786          557 SLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILL--DKDMNPKISDFGMARIFGGDELQS  634 (795)
Q Consensus       557 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll--~~~~~vkL~DFGla~~~~~~~~~~  634 (795)
                      +|.+++...  ...+++..+..++.||++||.|||+.+   |+||||||+|||+  +.++.+||+|||+++......   
T Consensus       172 ~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~---  243 (373)
T 2x4f_A          172 ELFDRIIDE--SYNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE---  243 (373)
T ss_dssp             EEHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC---
T ss_pred             cHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc---
Confidence            998888532  345889999999999999999999998   9999999999999  667889999999998765433   


Q ss_pred             cccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchh
Q 003786          635 KTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEA  714 (795)
Q Consensus       635 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~  714 (795)
                      ......||+.|+|||++....++.++|||||||++|||++|+.||........  ......   ..  +.     +....
T Consensus       244 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~--~~~i~~---~~--~~-----~~~~~  311 (373)
T 2x4f_A          244 KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAET--LNNILA---CR--WD-----LEDEE  311 (373)
T ss_dssp             BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH--HHHHHH---TC--CC-----SCSGG
T ss_pred             ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHh---cc--CC-----CChhh
Confidence            22335799999999999999999999999999999999999999975442221  111100   00  00     01111


Q ss_pred             hHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          715 SYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       715 ~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .......+.+++.+||+.||++|||+.|++++
T Consensus       312 ~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~h  343 (373)
T 2x4f_A          312 FQDISEEAKEFISKLLIKEKSWRISASEALKH  343 (373)
T ss_dssp             GTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             hccCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            12234578899999999999999999999985

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=7e-40  Score=354.87  Aligned_cols=250  Identities=24%  Similarity=0.295  Sum_probs=195.9

Q ss_pred             ccCCccccccCcCCcccEEEeEe----cCcceEEEEEecccC----ccchHHHHHHHHHHHhcCCcccceeeeeeeecce
Q 003786          474 TANFSTENKLGEGGFGPVYKGRL----LNGQEVAVKRLSSQS----GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEE  545 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  545 (795)
                      .++|++.+.||+|+||.||+++.    .+++.||||++.+..    ......+.+|+.+|++++||||+++++++.+.+.
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   95 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK   95 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence            46899999999999999999986    468899999997642    2334568899999999999999999999999999


Q ss_pred             eeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccc
Q 003786          546 KILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR  625 (795)
Q Consensus       546 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~  625 (795)
                      .++||||+++++|.+++..   ...+++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++
T Consensus        96 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~~~  169 (327)
T 3a62_A           96 LYLILEYLSGGELFMQLER---EGIFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK  169 (327)
T ss_dssp             EEEEEECCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTSCEEECCCSCC-
T ss_pred             EEEEEeCCCCCcHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHhCC---EEcccCCHHHeEECCCCcEEEEeCCccc
Confidence            9999999999999998853   345888999999999999999999998   9999999999999999999999999997


Q ss_pred             ccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccc
Q 003786          626 IFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWEL  705 (795)
Q Consensus       626 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  705 (795)
                      ......  .......||+.|+|||++.+..++.++|||||||++|||++|+.||........  ......   . .    
T Consensus       170 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~i~~---~-~----  237 (327)
T 3a62_A          170 ESIHDG--TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKT--IDKILK---C-K----  237 (327)
T ss_dssp             -----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHH---T-C----
T ss_pred             ccccCC--ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHH--HHHHHh---C-C----
Confidence            543221  123346799999999999999999999999999999999999999975432211  111100   0 0    


Q ss_pred             cCccccchhhHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHHH
Q 003786          706 IDPTLQNEASYLILNRYINVGLLCVQEDAADRP-----TMFEVVSML  747 (795)
Q Consensus       706 id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RP-----t~~evl~~L  747 (795)
                        .    ..+......+.+++.+||+.||++||     ++.|+++|-
T Consensus       238 --~----~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp  278 (327)
T 3a62_A          238 --L----NLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHP  278 (327)
T ss_dssp             --C----CCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSG
T ss_pred             --C----CCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCC
Confidence              0    01112345678899999999999999     788998864

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=8.9e-40  Score=355.15  Aligned_cols=260  Identities=26%  Similarity=0.384  Sum_probs=209.9

Q ss_pred             HccCCccccccCcCCcccEEEeEec--------CcceEEEEEecccC-ccchHHHHHHHHHHHhc-CCcccceeeeeeee
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL--------NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIE  542 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~  542 (795)
                      ..++|++.+.||+|+||.||+|+..        +++.||||++.... ....+.+.+|+++++++ +||||+++++++.+
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~  112 (334)
T 2pvf_A           33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ  112 (334)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence            4578999999999999999999853        46789999997543 23456789999999999 89999999999999


Q ss_pred             cceeeEEeecCCCCChhhhhhccCC-------------cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEE
Q 003786          543 LEEKILIYEYMPNKSLDFFLFDSTK-------------ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNIL  609 (795)
Q Consensus       543 ~~~~~lv~E~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIl  609 (795)
                      .+..++||||+++++|.+++.....             ...+++..+..++.||++||.|||+.+   |+||||||+||+
T Consensus       113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIl  189 (334)
T 2pvf_A          113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVL  189 (334)
T ss_dssp             SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEE
T ss_pred             CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCccceEE
Confidence            9999999999999999999965432             234888999999999999999999998   999999999999


Q ss_pred             ECCCCCeeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchh
Q 003786          610 LDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLT  688 (795)
Q Consensus       610 l~~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~  688 (795)
                      ++.++.+||+|||++................+|+.|+|||++.+..++.++|||||||++|||++ |..|+........ 
T Consensus       190 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-  268 (334)
T 2pvf_A          190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL-  268 (334)
T ss_dssp             ECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH-
T ss_pred             EcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHH-
Confidence            99999999999999987655443333444567889999999998899999999999999999999 9999865432221 


Q ss_pred             HhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          689 LLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       689 ~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                       ....    .....         ...+......+.+++.+||+.+|++||++.|++++|+..
T Consensus       269 -~~~~----~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l  316 (334)
T 2pvf_A          269 -FKLL----KEGHR---------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI  316 (334)
T ss_dssp             -HHHH----HHTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -HHHH----hcCCC---------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence             1111    00100         001112345678899999999999999999999999774

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=1.6e-40  Score=355.38  Aligned_cols=270  Identities=26%  Similarity=0.379  Sum_probs=204.5

Q ss_pred             cCCccccccCcCCcccEEEeEe-----cCcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeec--cee
Q 003786          475 ANFSTENKLGEGGFGPVYKGRL-----LNGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL--EEK  546 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~  546 (795)
                      .+|++.++||+|+||.||+|++     .+++.||||++.... ....+.+.+|++++++++||||+++++++.+.  ...
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  100 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI  100 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence            5689999999999999999983     358899999997543 34457899999999999999999999999877  668


Q ss_pred             eEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          547 ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                      ++||||+++++|.+++...  ...+++..+..++.||+.||+|||+++   |+||||||+||+++.++.+||+|||++..
T Consensus       101 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~  175 (302)
T 4e5w_A          101 KLIMEFLPSGSLKEYLPKN--KNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKA  175 (302)
T ss_dssp             EEEEECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred             EEEEEeCCCCcHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHhhcCC---cccCCCchheEEEcCCCCEEECccccccc
Confidence            9999999999999998543  245889999999999999999999998   99999999999999999999999999987


Q ss_pred             cCCCccc-ccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccc
Q 003786          627 FGGDELQ-SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWEL  705 (795)
Q Consensus       627 ~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  705 (795)
                      ....... .......||..|+|||.+.+..++.++||||||+++|+|++|..|+..........................
T Consensus       176 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (302)
T 4e5w_A          176 IETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNT  255 (302)
T ss_dssp             CCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHH
T ss_pred             ccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHH
Confidence            6543321 223345688899999999999999999999999999999999987532110000000000000000000000


Q ss_pred             cCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          706 IDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       706 id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      +........+...+..+.+++.+||+.||++|||+.|+++.|+.
T Consensus       256 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~  299 (302)
T 4e5w_A          256 LKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEA  299 (302)
T ss_dssp             HHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             HhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHH
Confidence            00111111222344678899999999999999999999999875

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=2.7e-39  Score=345.00  Aligned_cols=263  Identities=16%  Similarity=0.194  Sum_probs=210.5

Q ss_pred             ccCCccccccCcCCcccEEEeEe-cCcceEEEEEecccCccchHHHHHHHHHHHhc-CCcccceeeeeeeecceeeEEee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      .++|++.+.||+|+||.||+|+. .+++.||||++...  ...+.+.+|+.+++++ +|+|++++++++.+....++|||
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e   86 (298)
T 1csn_A            9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR--SDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID   86 (298)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECC--TTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccC--CccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence            46799999999999999999986 46899999998643  2345689999999999 79999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCC-----eeeeccccccc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMN-----PKISDFGMARI  626 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~-----vkL~DFGla~~  626 (795)
                      |+ +++|.+++...  ...+++..+..++.||+.||.|||+++   |+||||||+|||++.++.     +||+|||+++.
T Consensus        87 ~~-~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~  160 (298)
T 1csn_A           87 LL-GPSLEDLLDLC--GRKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF  160 (298)
T ss_dssp             CC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred             ec-CCCHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEeccCCCCCCCeEEEEECccccc
Confidence            99 99999998543  235899999999999999999999988   999999999999987776     99999999987


Q ss_pred             cCCCccc-----ccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcch-hHhHhHhhhccCc
Q 003786          627 FGGDELQ-----SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSL-TLLGHAWDLWKDD  700 (795)
Q Consensus       627 ~~~~~~~-----~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~-~~~~~~~~~~~~~  700 (795)
                      .......     .......||+.|+|||++.+..++.++|||||||++|||++|+.||........ .............
T Consensus       161 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  240 (298)
T 1csn_A          161 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQST  240 (298)
T ss_dssp             SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHS
T ss_pred             cccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCc
Confidence            6543221     123456799999999999999999999999999999999999999976543222 1111110000000


Q ss_pred             ccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccccCC
Q 003786          701 RAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTIN  753 (795)
Q Consensus       701 ~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~~~  753 (795)
                      ..         .......+..+.+++.+||+.+|++||++++|++.|+.....
T Consensus       241 ~~---------~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~  284 (298)
T 1csn_A          241 PL---------RELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER  284 (298)
T ss_dssp             CH---------HHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             cH---------HHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHh
Confidence            00         011112345788999999999999999999999999875443

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=5.2e-40  Score=364.57  Aligned_cols=253  Identities=25%  Similarity=0.308  Sum_probs=197.9

Q ss_pred             ccCCccccccCcCCcccEEEeEecCcceEEEEEecccC--ccchHHHHHHHHHHHhcC--CcccceeeeeeeecceeeEE
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQ--HRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lv  549 (795)
                      ..+|++.+.||+|+||.||++...+++.||||++....  ....+.+.+|+.+|++++  ||||+++++++...+..++|
T Consensus        55 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv  134 (390)
T 2zmd_A           55 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV  134 (390)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence            45699999999999999999998789999999986542  334577899999999996  59999999999999999999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      || +.+++|.+++...   ..+++..+..++.||+.||.|||+++   |+||||||+|||++ ++.+||+|||+++.+..
T Consensus       135 ~E-~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~  206 (390)
T 2zmd_A          135 ME-CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQP  206 (390)
T ss_dssp             EE-CCSEEHHHHHHHC---SSCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCCGGGEEES-SSCEEECCCSSSCCC--
T ss_pred             Ee-cCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEEE-CCeEEEEecCccccccC
Confidence            99 6788999998543   35788899999999999999999988   99999999999995 58999999999987654


Q ss_pred             Cccccccccccccccccccccccc-----------CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhcc
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQ-----------GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWK  698 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~-----------~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~  698 (795)
                      ...........||+.|+|||++.+           ..++.++|||||||++|||++|+.||.........+.    ... 
T Consensus       207 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~----~~~-  281 (390)
T 2zmd_A          207 DTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH----AII-  281 (390)
T ss_dssp             -------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHH----HHH-
T ss_pred             CCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHH----HHh-
Confidence            332223345679999999999865           4689999999999999999999999965332211111    111 


Q ss_pred             CcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          699 DDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       699 ~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                              ++......+......+.+++.+||+.||++||++.|++++.
T Consensus       282 --------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp  322 (390)
T 2zmd_A          282 --------DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP  322 (390)
T ss_dssp             --------CTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred             --------CccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhCc
Confidence                    11111111111134678899999999999999999999864

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=1.6e-40  Score=358.44  Aligned_cols=268  Identities=29%  Similarity=0.399  Sum_probs=205.1

Q ss_pred             CccccccCcCCcccEEEeEe-----cCcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeec--ceeeE
Q 003786          477 FSTENKLGEGGFGPVYKGRL-----LNGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL--EEKIL  548 (795)
Q Consensus       477 ~~~~~~LG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l  548 (795)
                      |++.++||+|+||.||++.+     .+++.||||++.... ....+.+.+|+++|++++||||+++++++.+.  ...++
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l  112 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL  112 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence            49999999999999988753     257889999997653 23456789999999999999999999999874  67899


Q ss_pred             EeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccC
Q 003786          549 IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      ||||+++++|.+++..    ..+++..+..++.||+.||.|||+.+   |+||||||+||+++.++.+||+|||++....
T Consensus       113 v~e~~~~~~L~~~l~~----~~~~~~~~~~i~~~l~~~l~~LH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~  185 (318)
T 3lxp_A          113 VMEYVPLGSLRDYLPR----HSIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVP  185 (318)
T ss_dssp             EECCCTTCBHHHHGGG----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECC
T ss_pred             EEecccCCcHHHHHhh----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEEcCCCCEEECCcccccccc
Confidence            9999999999999843    23889999999999999999999998   9999999999999999999999999998765


Q ss_pred             CCccc-ccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccC
Q 003786          629 GDELQ-SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID  707 (795)
Q Consensus       629 ~~~~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id  707 (795)
                      ..... .......+|+.|+|||++.+..++.++|||||||++|+|++|+.|+........................+.+.
T Consensus       186 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (318)
T 3lxp_A          186 EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE  265 (318)
T ss_dssp             TTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHH
T ss_pred             ccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHh
Confidence            43221 22334568889999999999899999999999999999999999875422111100000000000000111111


Q ss_pred             ccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcccc
Q 003786          708 PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKT  751 (795)
Q Consensus       708 ~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~  751 (795)
                      .......+...+..+.+++.+||+.||++|||+.|+++.|+...
T Consensus       266 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~  309 (318)
T 3lxp_A          266 RGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVH  309 (318)
T ss_dssp             TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             cccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence            11111222334567889999999999999999999999997743

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=5.2e-39  Score=363.92  Aligned_cols=248  Identities=26%  Similarity=0.386  Sum_probs=206.0

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      .++|.+.+.||+|+||.||+|++. +|+.||||++.+..   ....+.+.+|+.+|+.++||||+++++++...+..++|
T Consensus        15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv   94 (476)
T 2y94_A           15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV   94 (476)
T ss_dssp             ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            478999999999999999999875 69999999996542   23456789999999999999999999999999999999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      |||+++++|.+++..   ...+++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||++.....
T Consensus        95 ~E~~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~  168 (476)
T 2y94_A           95 MEYVSGGELFDYICK---NGRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSD  168 (476)
T ss_dssp             EECCSSEEHHHHTTS---SSSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEECTTCCEEECCCSSCEECCT
T ss_pred             EeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcccccHHHEEEecCCCeEEEeccchhhccc
Confidence            999999999999843   445899999999999999999999998   99999999999999999999999999987654


Q ss_pred             CcccccccccccccccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCc
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQGLF-SIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP  708 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~~~~-~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~  708 (795)
                      ..   .....+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||+.......  ....    ..+..      
T Consensus       169 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~--~~~i----~~~~~------  233 (476)
T 2y94_A          169 GE---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTL--FKKI----CDGIF------  233 (476)
T ss_dssp             TC---CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHH--HHHH----HTTCC------
T ss_pred             cc---cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHH--HHHH----hcCCc------
Confidence            32   2334679999999999988765 7899999999999999999999975443221  1111    01100      


Q ss_pred             cccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          709 TLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       709 ~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                          ..+......+.+++.+||+.||++|||+.|++++
T Consensus       234 ----~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h  267 (476)
T 2y94_A          234 ----YTPQYLNPSVISLLKHMLQVDPMKRATIKDIREH  267 (476)
T ss_dssp             ----CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred             ----CCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence                0011123467889999999999999999999985

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=1.8e-39  Score=354.06  Aligned_cols=264  Identities=20%  Similarity=0.221  Sum_probs=203.4

Q ss_pred             HhHHHHccCCccccccCcCCcccEEEeEec-CcceEEEEEeccc-----CccchHHHHHHHHHHHhcCCcccceeeeeee
Q 003786          468 ASVSAATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQ-----SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCI  541 (795)
Q Consensus       468 ~~i~~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~  541 (795)
                      .++....++|++.+.||+|+||.||+|+.. +++.||||++.+.     .....+.+.+|++++++++||||+++++++.
T Consensus        19 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~   98 (345)
T 3hko_A           19 GSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYE   98 (345)
T ss_dssp             BCHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             chhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhc
Confidence            345566788999999999999999999864 5888999998653     2344578999999999999999999999999


Q ss_pred             ecceeeEEeecCCCCChhhhhhccC-------------------------------------CcccCChhhHHHHHHHHH
Q 003786          542 ELEEKILIYEYMPNKSLDFFLFDST-------------------------------------KENLLGWGTRVRIIEGIA  584 (795)
Q Consensus       542 ~~~~~~lv~E~~~~gsL~~~l~~~~-------------------------------------~~~~l~~~~~~~i~~~i~  584 (795)
                      +.+..++||||+++++|.+++....                                     ....+++..+..++.||+
T Consensus        99 ~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~  178 (345)
T 3hko_A           99 DEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIF  178 (345)
T ss_dssp             CSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHH
T ss_pred             cCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHH
Confidence            9999999999999999999884211                                     012245677889999999


Q ss_pred             HHHHHHHhcCCCcEEeccCCCCcEEECCCC--CeeeeccccccccCCCc--cccccccccccccccccccccc--CCCCc
Q 003786          585 QGLLYLHQYSRLRVIHRDLKASNILLDKDM--NPKISDFGMARIFGGDE--LQSKTKRIVGTYGYMSPEYAQQ--GLFSI  658 (795)
Q Consensus       585 ~~l~~LH~~~~~~iiHrDikp~NIll~~~~--~vkL~DFGla~~~~~~~--~~~~~~~~~gt~~y~APE~~~~--~~~~~  658 (795)
                      +||.|||+.+   |+||||||+|||++.++  .+||+|||++..+....  .........||+.|+|||++.+  ..++.
T Consensus       179 ~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  255 (345)
T 3hko_A          179 SALHYLHNQG---ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGP  255 (345)
T ss_dssp             HHHHHHHHTT---EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCT
T ss_pred             HHHHHHHHCC---ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCc
Confidence            9999999998   99999999999998776  89999999998653211  1112344679999999999865  67899


Q ss_pred             ccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCC
Q 003786          659 KSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRP  738 (795)
Q Consensus       659 k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RP  738 (795)
                      ++|||||||++|||++|+.||.........  ...   ......       ............+.+++.+||+.+|++||
T Consensus       256 ~~DiwslG~il~el~~g~~pf~~~~~~~~~--~~~---~~~~~~-------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  323 (345)
T 3hko_A          256 KCDAWSAGVLLHLLLMGAVPFPGVNDADTI--SQV---LNKKLC-------FENPNYNVLSPLARDLLSNLLNRNVDERF  323 (345)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSHHHHH--HHH---HHCCCC-------TTSGGGGGSCHHHHHHHHHHSCSCTTTSC
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCChHHHH--HHH---Hhcccc-------cCCcccccCCHHHHHHHHHHcCCChhHCC
Confidence            999999999999999999999754422211  111   111000       01111112345678999999999999999


Q ss_pred             CHHHHHHH
Q 003786          739 TMFEVVSM  746 (795)
Q Consensus       739 t~~evl~~  746 (795)
                      ++.|++++
T Consensus       324 s~~~~l~h  331 (345)
T 3hko_A          324 DAMRALQH  331 (345)
T ss_dssp             CHHHHHHS
T ss_pred             CHHHHhcC
Confidence            99999985

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=3.5e-39  Score=346.23  Aligned_cols=264  Identities=26%  Similarity=0.370  Sum_probs=201.3

Q ss_pred             HccCCccccccCcCCcccEEEeEe-cCcceEEEEEecccC-----ccchHHHHHHHHHHHhcC---Ccccceeeeeeeec
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQS-----GQGQEEFKNEIKLIAKLQ---HRNLVRLLGCCIEL  543 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~  543 (795)
                      ..++|++.++||+|+||.||+|++ .+++.||||++....     ......+.+|+.++++++   ||||+++++++...
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~   86 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS   86 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence            467899999999999999999986 468999999986432     122356778888887775   99999999999876


Q ss_pred             c-----eeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeee
Q 003786          544 E-----EKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKI  618 (795)
Q Consensus       544 ~-----~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL  618 (795)
                      .     ..++||||+. ++|.+++.... ...+++..+..++.||+.||+|||+++   |+||||||+|||++.++.+||
T Consensus        87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl  161 (308)
T 3g33_A           87 RTDREIKVTLVFEHVD-QDLRTYLDKAP-PPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKL  161 (308)
T ss_dssp             CSSSEEEEEEEEECCC-CBHHHHHHTCC-TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCTTTEEECTTSCEEE
T ss_pred             CCCCceeEEEEehhhh-cCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEE
Confidence            5     5789999998 59988885432 234899999999999999999999998   999999999999999999999


Q ss_pred             eccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhc-
Q 003786          619 SDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLW-  697 (795)
Q Consensus       619 ~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~-  697 (795)
                      +|||+++......   ......||+.|+|||++.+..++.++|||||||++|||++|+.||........  ........ 
T Consensus       162 ~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~--~~~i~~~~~  236 (308)
T 3g33_A          162 ADFGLARIYSYQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ--LGKIFDLIG  236 (308)
T ss_dssp             CSCSCTTTSTTCC---CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHH--HHHHHHHHC
T ss_pred             eeCccccccCCCc---ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhC
Confidence            9999998764332   23446789999999999999999999999999999999999999976543222  11111110 


Q ss_pred             --cCccccc-------ccC---ccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          698 --KDDRAWE-------LID---PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       698 --~~~~~~~-------~id---~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                        .......       ...   +.............+.+++.+||+.||++|||+.|++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  297 (308)
T 3g33_A          237 LPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH  297 (308)
T ss_dssp             CCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             CCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence              0000000       000   000011122344678899999999999999999999985

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=1.2e-39  Score=346.29  Aligned_cols=252  Identities=23%  Similarity=0.333  Sum_probs=203.9

Q ss_pred             ccCCccccccCcCCcccEEEeEecC-c-------ceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecce
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLN-G-------QEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEE  545 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  545 (795)
                      .++|++.+.||+|+||.||+|+... +       +.||+|++........+.+.+|+.++++++||||+++++++.+.+.
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (289)
T 4fvq_A            7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE   86 (289)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred             hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence            4679999999999999999998643 3       4699999977766677889999999999999999999999999999


Q ss_pred             eeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCC--------ee
Q 003786          546 KILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMN--------PK  617 (795)
Q Consensus       546 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~--------vk  617 (795)
                      .++||||+++++|.+++...  ...+++..+..++.||+.||.|||+++   |+||||||+|||++.++.        +|
T Consensus        87 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~k  161 (289)
T 4fvq_A           87 NILVQEFVKFGSLDTYLKKN--KNCINILWKLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIK  161 (289)
T ss_dssp             CEEEEECCTTCBHHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEEECCBGGGTBCCEEE
T ss_pred             CEEEEECCCCCCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHhhCC---eECCCcCcceEEEecCCcccccccceee
Confidence            99999999999999999543  334889999999999999999999998   999999999999998887        99


Q ss_pred             eeccccccccCCCccccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhh
Q 003786          618 ISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDL  696 (795)
Q Consensus       618 L~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~  696 (795)
                      |+|||++.....      .....||+.|+|||++.+ ..++.++|||||||++|||++|..|+......... .....  
T Consensus       162 l~Dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~-~~~~~--  232 (289)
T 4fvq_A          162 LSDPGISITVLP------KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRK-LQFYE--  232 (289)
T ss_dssp             ECCCCSCTTTSC------HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH-HHHHH--
T ss_pred             eccCcccccccC------ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHH-HHHhh--
Confidence            999999875432      223568899999999987 77999999999999999999966554332221111 11100  


Q ss_pred             ccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccccC
Q 003786          697 WKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTI  752 (795)
Q Consensus       697 ~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~~  752 (795)
                       ......    +.        ....+.+++.+||+.||++|||+.|++++|+....
T Consensus       233 -~~~~~~----~~--------~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~  275 (289)
T 4fvq_A          233 -DRHQLP----AP--------KAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT  275 (289)
T ss_dssp             -TTCCCC----CC--------SSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred             -ccCCCC----CC--------CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence             001110    00        12356789999999999999999999999988543

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=3.1e-40  Score=356.52  Aligned_cols=262  Identities=26%  Similarity=0.418  Sum_probs=211.3

Q ss_pred             HHHccCCccccccCcCCcccEEEeEec------CcceEEEEEecccCc-cchHHHHHHHHHHHhcCCcccceeeeeeeec
Q 003786          471 SAATANFSTENKLGEGGFGPVYKGRLL------NGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL  543 (795)
Q Consensus       471 ~~~~~~~~~~~~LG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  543 (795)
                      ....++|++.+.||+|+||.||+|+..      .++.||||++..... .....+.+|+.++++++||||+++++++.+.
T Consensus        21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~  100 (322)
T 1p4o_A           21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG  100 (322)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSS
T ss_pred             cchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccC
Confidence            445688999999999999999999754      377899999975432 3345788999999999999999999999999


Q ss_pred             ceeeEEeecCCCCChhhhhhccCC-------cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCe
Q 003786          544 EEKILIYEYMPNKSLDFFLFDSTK-------ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNP  616 (795)
Q Consensus       544 ~~~~lv~E~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~v  616 (795)
                      +..++||||+++++|.+++.....       ...+++..+..++.||+.||.|||+++   |+||||||+||+++.++.+
T Consensus       101 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~NIli~~~~~~  177 (322)
T 1p4o_A          101 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTV  177 (322)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEECTTCCE
T ss_pred             CccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---CccCCCccceEEEcCCCeE
Confidence            999999999999999999854321       245688999999999999999999998   9999999999999999999


Q ss_pred             eeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhh
Q 003786          617 KISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWD  695 (795)
Q Consensus       617 kL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~  695 (795)
                      ||+|||++................+|+.|+|||++.+..++.++|||||||++|+|++ |..|+........  ....  
T Consensus       178 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~--~~~~--  253 (322)
T 1p4o_A          178 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV--LRFV--  253 (322)
T ss_dssp             EECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHH--HHHH--
T ss_pred             EECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHH--HHHH--
Confidence            9999999986644333333344567899999999999999999999999999999999 7888765432211  1111  


Q ss_pred             hccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          696 LWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       696 ~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                        ......         ..+...+..+.+++.+||+.+|++|||+.|++++|+..
T Consensus       254 --~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~  297 (322)
T 1p4o_A          254 --MEGGLL---------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE  297 (322)
T ss_dssp             --HTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred             --HcCCcC---------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHh
Confidence              111110         01112345678899999999999999999999999874

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=1.2e-39  Score=350.39  Aligned_cols=246  Identities=25%  Similarity=0.277  Sum_probs=194.3

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCc--cchHHHHHHHHHHHhc-CCcccceeeeeeeecceeeEE
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG--QGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv  549 (795)
                      .++|++.++||+|+||.||+|+.. +++.||||++.....  ....++..|+..+.++ +||||+++++++.+.+..++|
T Consensus        56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv  135 (311)
T 3p1a_A           56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ  135 (311)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence            367999999999999999999876 689999999865432  2334455666666555 899999999999999999999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      |||+ +++|.+++...  ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++.....
T Consensus       136 ~e~~-~~~L~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~  209 (311)
T 3p1a_A          136 TELC-GPSLQQHCEAW--GASLPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGT  209 (311)
T ss_dssp             EECC-CCBHHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECGGGCEEECCCTTCEECC-
T ss_pred             Eecc-CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEccceeeeeccc
Confidence            9999 66888777543  345899999999999999999999998   99999999999999999999999999987643


Q ss_pred             CcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcc
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT  709 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~  709 (795)
                      ..   ......||+.|+|||++.+ .++.++|||||||++|||++|..|+.....         +......        .
T Consensus       210 ~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~---------~~~~~~~--------~  268 (311)
T 3p1a_A          210 AG---AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG---------WQQLRQG--------Y  268 (311)
T ss_dssp             --------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH---------HHHHTTT--------C
T ss_pred             CC---CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH---------HHHHhcc--------C
Confidence            32   2334569999999998876 789999999999999999999776542110         1111111        1


Q ss_pred             ccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          710 LQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       710 l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ............+.+++.+||+.||++|||+.|++++
T Consensus       269 ~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h  305 (311)
T 3p1a_A          269 LPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLAL  305 (311)
T ss_dssp             CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             CCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence            1112223345678899999999999999999999985

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=1.4e-39  Score=367.94  Aligned_cols=250  Identities=28%  Similarity=0.411  Sum_probs=204.8

Q ss_pred             HccCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecc-eeeEEee
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELE-EKILIYE  551 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~E  551 (795)
                      ..++|++.++||+|+||.||+|+.. ++.||||++....  ..+.+.+|+.+|++++||||+++++++.+.. ..++|||
T Consensus       191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e  267 (450)
T 1k9a_A          191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE  267 (450)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE
T ss_pred             ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE
Confidence            3467999999999999999999874 7899999997543  5678999999999999999999999987765 7899999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      |+++|+|.+++... ....+++..+..++.||++||+|||+++   |+||||||+|||++.++.+||+|||+++..... 
T Consensus       268 ~~~~g~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-  342 (450)
T 1k9a_A          268 YMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-  342 (450)
T ss_dssp             CCTTCBHHHHHHHH-CTTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTSCEEECCCTTCEECC---
T ss_pred             ecCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEECCCCCEEEeeCCCccccccc-
Confidence            99999999999643 2334788999999999999999999998   999999999999999999999999999854322 


Q ss_pred             ccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCccc
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL  710 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l  710 (795)
                          .....+++.|+|||++.+..++.++|||||||++|||++ |+.|+........  ....    ..+.         
T Consensus       343 ----~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~--~~~i----~~~~---------  403 (450)
T 1k9a_A          343 ----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV--VPRV----EKGY---------  403 (450)
T ss_dssp             --------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTH--HHHH----HTTC---------
T ss_pred             ----ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH--HHHH----HcCC---------
Confidence                122357889999999999999999999999999999998 9999876543322  1111    1110         


Q ss_pred             cchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       711 ~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      ....+..++..+.+++.+||+.||++|||+.+|++.|+.
T Consensus       404 ~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~  442 (450)
T 1k9a_A          404 KMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEH  442 (450)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            011122344678899999999999999999999999876

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=2.6e-39  Score=353.10  Aligned_cols=268  Identities=17%  Similarity=0.192  Sum_probs=201.5

Q ss_pred             ccCCccccccCcCCcccEEEeEec----CcceEEEEEecccCcc-----------chHHHHHHHHHHHhcCCcccceeee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL----NGQEVAVKRLSSQSGQ-----------GQEEFKNEIKLIAKLQHRNLVRLLG  538 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~l~~  538 (795)
                      .++|++.+.||+|+||.||+|+..    .+..+|||++......           ....+.+|+.+++.++||||+++++
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~  115 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG  115 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence            367999999999999999999875    5788999998654321           1234667888999999999999999


Q ss_pred             eeee----cceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCC
Q 003786          539 CCIE----LEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDM  614 (795)
Q Consensus       539 ~~~~----~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~  614 (795)
                      ++..    ....++||||+ +++|.+++...   ..+++..+..++.||+.||+|||+++   |+||||||+|||++.++
T Consensus       116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~  188 (345)
T 2v62_A          116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQN---GTFKKSTVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGYKN  188 (345)
T ss_dssp             EEEEESSSCEEEEEEEECE-EEEHHHHCBGG---GBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEESSS
T ss_pred             ccccccCCCcEEEEEEecc-CCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCcCHHHEEEccCC
Confidence            9988    77889999999 99999998433   36899999999999999999999998   99999999999999887


Q ss_pred             --CeeeeccccccccCCCcc-----cccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcch
Q 003786          615 --NPKISDFGMARIFGGDEL-----QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSL  687 (795)
Q Consensus       615 --~vkL~DFGla~~~~~~~~-----~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~  687 (795)
                        .+||+|||+++.+.....     ........||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus       189 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~  268 (345)
T 2v62_A          189 PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPV  268 (345)
T ss_dssp             TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHH
T ss_pred             CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccH
Confidence              999999999987643211     1112445799999999999999999999999999999999999999964332222


Q ss_pred             hHhHhHhhhccCcccccccCccccch-hhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccccCCC
Q 003786          688 TLLGHAWDLWKDDRAWELIDPTLQNE-ASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINL  754 (795)
Q Consensus       688 ~~~~~~~~~~~~~~~~~~id~~l~~~-~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~~~l  754 (795)
                      ...........      .+...+... .....+..+.+++.+||+.+|++||++.+|++.|+....++
T Consensus       269 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~  330 (345)
T 2v62_A          269 AVQTAKTNLLD------ELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGIPL  330 (345)
T ss_dssp             HHHHHHHHHHH------TTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCCCC
T ss_pred             HHHHHHHhhcc------cccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCCcc
Confidence            11111111000      000000000 00023457889999999999999999999999998855533

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=2.5e-39  Score=341.58  Aligned_cols=251  Identities=21%  Similarity=0.305  Sum_probs=206.1

Q ss_pred             ccCCccccccCcCCcccEEEeEecC-cceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      .++|++.++||+|+||.||+|+... ++.+|+|++........+.+.+|++++++++||||+++++++.+....++||||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (277)
T 3f3z_A            8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL   87 (277)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence            4679999999999999999998754 778999999876667778999999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEE---CCCCCeeeeccccccccCC
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILL---DKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll---~~~~~vkL~DFGla~~~~~  629 (795)
                      +++++|.+++..   ...+++..+..++.|++.||.|||+++   |+||||||+||++   +.++.+||+|||++.....
T Consensus        88 ~~~~~L~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~  161 (277)
T 3f3z_A           88 CTGGELFERVVH---KRVFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP  161 (277)
T ss_dssp             CCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCT
T ss_pred             cCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEecCCCCCcEEEEecccceeccC
Confidence            999999888844   345889999999999999999999998   9999999999999   7889999999999987654


Q ss_pred             CcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcc
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT  709 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~  709 (795)
                      ..   ......||+.|+|||++.+. ++.++||||||+++|+|++|+.||........  ....    .....      .
T Consensus       162 ~~---~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~--~~~~----~~~~~------~  225 (277)
T 3f3z_A          162 GK---MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEV--MLKI----REGTF------T  225 (277)
T ss_dssp             TS---CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHH----HHCCC------C
T ss_pred             cc---chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHH--HHHH----HhCCC------C
Confidence            32   23345799999999988654 89999999999999999999999875432221  1110    00000      0


Q ss_pred             ccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          710 LQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       710 l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .........+..+.+++.+||+.||++|||+.|++++
T Consensus       226 ~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h  262 (277)
T 3f3z_A          226 FPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH  262 (277)
T ss_dssp             CCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred             CCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            0011111234578899999999999999999999874

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=2.7e-39  Score=347.34  Aligned_cols=264  Identities=25%  Similarity=0.287  Sum_probs=200.1

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccCcc--chHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQ--GQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      ++|++.++||+|+||.||+|+.. +++.||||++......  ..+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE   82 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence            67999999999999999999875 4899999998654322  24668899999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      |+++++|..++..   ...+++..+..++.|+++||.|||+.+   |+||||||+||+++.++.+||+|||++.......
T Consensus        83 ~~~~~~l~~~~~~---~~~~~~~~~~~i~~~l~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  156 (311)
T 4agu_A           83 YCDHTVLHELDRY---QRGVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPS  156 (311)
T ss_dssp             CCSEEHHHHHHHT---SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECC---
T ss_pred             eCCCchHHHHHhh---hcCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc
Confidence            9999999888743   345889999999999999999999998   9999999999999999999999999998765322


Q ss_pred             cccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHh---------hhccCcc
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAW---------DLWKDDR  701 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~---------~~~~~~~  701 (795)
                        .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...............         ..+....
T Consensus       157 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (311)
T 4agu_A          157 --DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQ  234 (311)
T ss_dssp             -----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCG
T ss_pred             --cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccc
Confidence              12234578999999999876 67899999999999999999999999765432221111000         0000000


Q ss_pred             c---ccccCccccc---hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          702 A---WELIDPTLQN---EASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       702 ~---~~~id~~l~~---~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .   ....++....   ......+..+.+++.+||+.||++|||++|++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  285 (311)
T 4agu_A          235 YFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH  285 (311)
T ss_dssp             GGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred             ccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence            0   0000110000   0112234568899999999999999999999986

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=8.6e-40  Score=351.68  Aligned_cols=267  Identities=26%  Similarity=0.385  Sum_probs=200.2

Q ss_pred             HHHHccCCccccccCcCCcccEEEeEec----CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeec
Q 003786          470 VSAATANFSTENKLGEGGFGPVYKGRLL----NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL  543 (795)
Q Consensus       470 i~~~~~~~~~~~~LG~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  543 (795)
                      +....++|.+.+.||+|+||.||+|+..    .++.||||++....  ....+.+.+|+.++++++||||+++++++.+.
T Consensus        29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~  108 (313)
T 3brb_A           29 VVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEM  108 (313)
T ss_dssp             TBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-
T ss_pred             cccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeec
Confidence            3345678999999999999999999754    35589999986542  23346789999999999999999999999876


Q ss_pred             ce-----eeEEeecCCCCChhhhhhcc---CCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCC
Q 003786          544 EE-----KILIYEYMPNKSLDFFLFDS---TKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMN  615 (795)
Q Consensus       544 ~~-----~~lv~E~~~~gsL~~~l~~~---~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~  615 (795)
                      +.     .++||||+++++|..++...   .....+++..+..++.||++||.|||+++   |+||||||+||+++.++.
T Consensus       109 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~  185 (313)
T 3brb_A          109 SSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDDMT  185 (313)
T ss_dssp             ------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCSGGGEEECTTSC
T ss_pred             cccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCc
Confidence            54     48999999999999988533   23456899999999999999999999988   999999999999999999


Q ss_pred             eeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHh
Q 003786          616 PKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAW  694 (795)
Q Consensus       616 vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~  694 (795)
                      +||+|||++................+++.|+|||.+.+..++.++||||||+++|+|++ |..|+........  .... 
T Consensus       186 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~--~~~~-  262 (313)
T 3brb_A          186 VCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEM--YDYL-  262 (313)
T ss_dssp             EEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH--HHHH-
T ss_pred             EEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHH--HHHH-
Confidence            99999999987654433233344567889999999999999999999999999999999 8888865443222  1111 


Q ss_pred             hhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccccCCC
Q 003786          695 DLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINL  754 (795)
Q Consensus       695 ~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~~~l  754 (795)
                         .....         ...+...+..+.+++.+||+.+|++||++.+++++|+.....+
T Consensus       263 ---~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l  310 (313)
T 3brb_A          263 ---LHGHR---------LKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL  310 (313)
T ss_dssp             ---HTTCC---------CCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             ---HcCCC---------CCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence               00100         0111223457889999999999999999999999998754433

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=3.1e-39  Score=348.89  Aligned_cols=252  Identities=23%  Similarity=0.294  Sum_probs=206.5

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCcc------chHHHHHHHHHHHhcCCcccceeeeeeeeccee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQ------GQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEK  546 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  546 (795)
                      .++|++.+.||+|+||.||+|+.. +++.||||++......      ..+.+.+|+.++++++||||+++++++.+....
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   90 (321)
T 2a2a_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV   90 (321)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence            467999999999999999999875 5899999998654322      357899999999999999999999999999999


Q ss_pred             eEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCC----Ceeeeccc
Q 003786          547 ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDM----NPKISDFG  622 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~----~vkL~DFG  622 (795)
                      ++||||+++++|.+++..   ...+++..+..++.||+.||.|||+.+   |+||||||+||+++.++    .+||+|||
T Consensus        91 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH~~~---ivH~dikp~NIl~~~~~~~~~~~kl~Dfg  164 (321)
T 2a2a_A           91 VLILELVSGGELFDFLAQ---KESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFG  164 (321)
T ss_dssp             EEEECCCCSCBHHHHHHT---CSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCT
T ss_pred             EEEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChHHEEEecCCCCcCCEEEccCc
Confidence            999999999999999853   345889999999999999999999998   99999999999999888    79999999


Q ss_pred             cccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCccc
Q 003786          623 MARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRA  702 (795)
Q Consensus       623 la~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~  702 (795)
                      ++.......   ......||+.|+|||++.+..++.++|||||||++|+|++|..||........  .....    ... 
T Consensus       165 ~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~i~----~~~-  234 (321)
T 2a2a_A          165 LAHEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET--LANIT----SVS-  234 (321)
T ss_dssp             TCEECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH--HHHHH----TTC-
T ss_pred             cceecCccc---cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHH--HHHHH----hcc-
Confidence            998765432   22345799999999999999999999999999999999999999865432211  11110    000 


Q ss_pred             ccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          703 WELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       703 ~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                           ...........+..+.+++.+||+.||++|||+.|++++
T Consensus       235 -----~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h  273 (321)
T 2a2a_A          235 -----YDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH  273 (321)
T ss_dssp             -----CCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred             -----cccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence                 001111122234567899999999999999999999985

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=1.2e-39  Score=350.82  Aligned_cols=266  Identities=27%  Similarity=0.370  Sum_probs=211.6

Q ss_pred             HhHHHHccCCccccccCcCCcccEEEeEe------cCcceEEEEEecccCc-cchHHHHHHHHHHHhc-CCcccceeeee
Q 003786          468 ASVSAATANFSTENKLGEGGFGPVYKGRL------LNGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKL-QHRNLVRLLGC  539 (795)
Q Consensus       468 ~~i~~~~~~~~~~~~LG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~  539 (795)
                      .......++|++.+.||+|+||.||+|+.      .+++.||||++..... ...+.+.+|+.+++++ +||||++++++
T Consensus        20 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~   99 (316)
T 2xir_A           20 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA   99 (316)
T ss_dssp             HHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEE
Confidence            33444568899999999999999999974      3468899999976432 2346789999999999 79999999999


Q ss_pred             eeecc-eeeEEeecCCCCChhhhhhccCC-------------cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCC
Q 003786          540 CIELE-EKILIYEYMPNKSLDFFLFDSTK-------------ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKA  605 (795)
Q Consensus       540 ~~~~~-~~~lv~E~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp  605 (795)
                      +...+ ..++||||+++++|.+++.....             ...+++..+..++.||++||.|||+.+   |+||||||
T Consensus       100 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp  176 (316)
T 2xir_A          100 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAA  176 (316)
T ss_dssp             ECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSG
T ss_pred             EecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC---cccccCcc
Confidence            88765 48999999999999999965432             123788899999999999999999998   99999999


Q ss_pred             CcEEECCCCCeeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCC
Q 003786          606 SNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNT  684 (795)
Q Consensus       606 ~NIll~~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~  684 (795)
                      +||+++.++.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|+|++ |..|+.....
T Consensus       177 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~  256 (316)
T 2xir_A          177 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI  256 (316)
T ss_dssp             GGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCC
T ss_pred             ceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccch
Confidence            999999999999999999987654433333444678899999999999999999999999999999998 9999876443


Q ss_pred             cchhHhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          685 NSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       685 ~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                      ..... ...    ......         ..+......+.+++.+||+.||++|||+.||+++|+..
T Consensus       257 ~~~~~-~~~----~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~  308 (316)
T 2xir_A          257 DEEFC-RRL----KEGTRM---------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL  308 (316)
T ss_dssp             SHHHH-HHH----HHTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             hHHHH-HHh----ccCccC---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            32211 111    001000         01111235678899999999999999999999999763

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=8.7e-40  Score=369.63  Aligned_cols=250  Identities=23%  Similarity=0.263  Sum_probs=196.0

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEeccc---CccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQ---SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      .++|++.++||+|+||.||+|+.. +++.||||++.+.   .......+.+|+.+|++++||||+++++++.+.+..++|
T Consensus       147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv  226 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV  226 (446)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred             hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence            467999999999999999999864 5899999999753   233446678899999999999999999999999999999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHh-cCCCcEEeccCCCCcEEECCCCCeeeeccccccccC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ-YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      |||+++++|..++..   ...+++..+..++.||+.||+|||+ .+   |+||||||+||||+.++.+||+|||+++...
T Consensus       227 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~g---iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~  300 (446)
T 4ejn_A          227 MEYANGGELFFHLSR---ERVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGI  300 (446)
T ss_dssp             ECCCSSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCCCCGGGEEECSSSCEEECCCCCCCTTC
T ss_pred             EeeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHhhcCC---EEECCCCHHHEEECCCCCEEEccCCCceecc
Confidence            999999999988843   3458999999999999999999998 77   9999999999999999999999999998643


Q ss_pred             CCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCc
Q 003786          629 GDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP  708 (795)
Q Consensus       629 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~  708 (795)
                      ...  .......||+.|+|||++.+..++.++|||||||++|||++|+.||........  .....  .....       
T Consensus       301 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~--~~~i~--~~~~~-------  367 (446)
T 4ejn_A          301 KDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL--FELIL--MEEIR-------  367 (446)
T ss_dssp             C-------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHH--HCCCC-------
T ss_pred             CCC--cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHH--HHHHH--hCCCC-------
Confidence            222  223457899999999999999999999999999999999999999965432221  11110  00001       


Q ss_pred             cccchhhHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHHH
Q 003786          709 TLQNEASYLILNRYINVGLLCVQEDAADRP-----TMFEVVSML  747 (795)
Q Consensus       709 ~l~~~~~~~~~~~l~~li~~cL~~dP~~RP-----t~~evl~~L  747 (795)
                           .+......+.+++.+||+.||++||     +++|+++|-
T Consensus       368 -----~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp  406 (446)
T 4ejn_A          368 -----FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHR  406 (446)
T ss_dssp             -----CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSG
T ss_pred             -----CCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCc
Confidence                 1112235678999999999999999     999999863

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=8.6e-40  Score=343.00  Aligned_cols=255  Identities=29%  Similarity=0.446  Sum_probs=209.2

Q ss_pred             ccCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecC
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYM  553 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  553 (795)
                      .++|++.+.||+|+||.||+++..+++.||+|++.... ...+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   85 (267)
T 3t9t_A            7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM   85 (267)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred             hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence            36799999999999999999998888899999997543 34578999999999999999999999999999999999999


Q ss_pred             CCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccc
Q 003786          554 PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ  633 (795)
Q Consensus       554 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~  633 (795)
                      ++++|.+++...  ...+++..+..++.||++||.|||+++   |+||||||+||+++.++.+||+|||++........ 
T Consensus        86 ~~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~-  159 (267)
T 3t9t_A           86 EHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-  159 (267)
T ss_dssp             TTCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHH-
T ss_pred             CCCcHHHHHhhC--cccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEECCCCCEEEcccccccccccccc-
Confidence            999999998543  345889999999999999999999998   99999999999999999999999999987643221 


Q ss_pred             ccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCccccc
Q 003786          634 SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQN  712 (795)
Q Consensus       634 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~  712 (795)
                      .......+++.|+|||++.+..++.++||||||+++|+|++ |+.|+........  ....    ....  ...      
T Consensus       160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~--~~~i----~~~~--~~~------  225 (267)
T 3t9t_A          160 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV--VEDI----STGF--RLY------  225 (267)
T ss_dssp             HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH--HHHH----HTTC--CCC------
T ss_pred             cccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHH--HHHH----hcCC--cCC------
Confidence            12233467889999999998899999999999999999999 8888865432111  1111    0110  000      


Q ss_pred             hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          713 EASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       713 ~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                       .+......+.+++.+||+.+|++||++.+++++|+..
T Consensus       226 -~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l  262 (267)
T 3t9t_A          226 -KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI  262 (267)
T ss_dssp             -CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -CCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence             1112245678899999999999999999999999763

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=1.9e-39  Score=345.01  Aligned_cols=261  Identities=26%  Similarity=0.419  Sum_probs=195.1

Q ss_pred             HccCCccccccCcCCcccEEEeEecCcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      ..++|++.++||+|+||.||+|+..  ..+|||++....  ....+.+.+|+.+|++++||||+++++++ .....++||
T Consensus        22 ~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~   98 (289)
T 3og7_A           22 PDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVT   98 (289)
T ss_dssp             CTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEE
T ss_pred             CccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEE
Confidence            3478999999999999999999853  469999986543  23446789999999999999999999965 566789999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      ||+++++|.+++...  ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++......
T Consensus        99 e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  173 (289)
T 3og7_A           99 QWCEGSSLYHHLHAS--ETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRW  173 (289)
T ss_dssp             ECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECCCC--------
T ss_pred             EecCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEEEccceeccccccc
Confidence            999999999988432  345889999999999999999999998   999999999999999999999999999865433


Q ss_pred             cccccccccccccccccccccc---cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccC
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQ---QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID  707 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~---~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id  707 (795)
                      ..........||+.|+|||++.   ...++.++|||||||++|+|++|+.||......... ......    ......+ 
T Consensus       174 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~-~~~~~~----~~~~~~~-  247 (289)
T 3og7_A          174 SGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI-IEMVGR----GSLSPDL-  247 (289)
T ss_dssp             ----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHH-HHHHHH----TSCCCCT-
T ss_pred             cccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHH-HHHhcc----cccCcch-
Confidence            3233334567999999999886   567899999999999999999999999764432221 111111    1110000 


Q ss_pred             ccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcccc
Q 003786          708 PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKT  751 (795)
Q Consensus       708 ~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~  751 (795)
                          .......+..+.+++.+||+.+|++||++.|++++|+...
T Consensus       248 ----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~  287 (289)
T 3og7_A          248 ----SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA  287 (289)
T ss_dssp             ----TSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             ----hhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence                0111223457889999999999999999999999998743

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=1.3e-39  Score=352.51  Aligned_cols=250  Identities=23%  Similarity=0.249  Sum_probs=181.6

Q ss_pred             ccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcC-CcccceeeeeeeecceeeEEeecCCCCC
Q 003786          480 ENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQ-HRNLVRLLGCCIELEEKILIYEYMPNKS  557 (795)
Q Consensus       480 ~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~E~~~~gs  557 (795)
                      .++||+|+||.||+|++. +++.||||++.+.   ....+.+|+.+++++. ||||+++++++.+....++||||+++++
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~   92 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE   92 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence            378999999999999875 5899999999643   4567889999999997 9999999999999999999999999999


Q ss_pred             hhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCC---CeeeeccccccccCCCcccc
Q 003786          558 LDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDM---NPKISDFGMARIFGGDELQS  634 (795)
Q Consensus       558 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~---~vkL~DFGla~~~~~~~~~~  634 (795)
                      |.+++..   ...+++..+..++.||+.||.|||+++   |+||||||+|||++.++   .+||+|||+++......  .
T Consensus        93 L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~--~  164 (325)
T 3kn6_A           93 LFERIKK---KKHFSETEASYIMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN--Q  164 (325)
T ss_dssp             HHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEC----CEEEECCCTTCEECCC-----
T ss_pred             HHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCHHHEEEecCCCcccEEEeccccceecCCCC--C
Confidence            9999854   345899999999999999999999998   99999999999998766   79999999998654332  2


Q ss_pred             cccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcch-hHhHhHhhhccCcccccccCccccch
Q 003786          635 KTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSL-TLLGHAWDLWKDDRAWELIDPTLQNE  713 (795)
Q Consensus       635 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~id~~l~~~  713 (795)
                      ......||+.|+|||++.+..++.++|||||||++|+|++|+.||........ ............+.      ......
T Consensus       165 ~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~------~~~~~~  238 (325)
T 3kn6_A          165 PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGD------FSFEGE  238 (325)
T ss_dssp             -------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTC------CCCCSH
T ss_pred             cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCC------CCCCcc
Confidence            23345789999999999999999999999999999999999999976442111 00000111111111      011122


Q ss_pred             hhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          714 ASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       714 ~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .....+..+.+++.+||+.||++|||++|++++
T Consensus       239 ~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h  271 (325)
T 3kn6_A          239 AWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN  271 (325)
T ss_dssp             HHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred             cccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence            223345678899999999999999999999875

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=1.6e-39  Score=360.72  Aligned_cols=264  Identities=24%  Similarity=0.306  Sum_probs=192.1

Q ss_pred             HccCCccccccCcCCcccEEEeEec-CcceEEEEEeccc--CccchHHHHHHHHHHHhcC-Ccccceeeeeeeecc--ee
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQ--SGQGQEEFKNEIKLIAKLQ-HRNLVRLLGCCIELE--EK  546 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~--~~  546 (795)
                      ..++|++.++||+|+||.||+|.+. +++.||||++...  .....+.+.+|+.+|+++. ||||+++++++...+  ..
T Consensus         7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~   86 (388)
T 3oz6_A            7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV   86 (388)
T ss_dssp             HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred             ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence            4578999999999999999999864 5899999998653  2334567889999999997 999999999997554  68


Q ss_pred             eEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          547 ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                      ++|||||+ ++|..++..    ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.
T Consensus        87 ~lv~e~~~-~~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~  158 (388)
T 3oz6_A           87 YLVFDYME-TDLHAVIRA----NILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRS  158 (388)
T ss_dssp             EEEEECCS-EEHHHHHHH----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEEecccC-cCHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHeEEcCCCCEEecCCccccc
Confidence            99999998 578887743    35888999999999999999999998   99999999999999999999999999986


Q ss_pred             cCCCc-------------------cccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcc
Q 003786          627 FGGDE-------------------LQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNS  686 (795)
Q Consensus       627 ~~~~~-------------------~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~  686 (795)
                      +....                   ........+||+.|+|||++.+ ..++.++|||||||++|||++|++||...+...
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~  238 (388)
T 3oz6_A          159 FVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMN  238 (388)
T ss_dssp             SSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             ccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            53211                   0112234579999999999876 679999999999999999999999997654222


Q ss_pred             hhHhHhHhhhccCccc--cccc-------------------Cccccchhh------------HHHHHHHHHHHHhhccCC
Q 003786          687 LTLLGHAWDLWKDDRA--WELI-------------------DPTLQNEAS------------YLILNRYINVGLLCVQED  733 (795)
Q Consensus       687 ~~~~~~~~~~~~~~~~--~~~i-------------------d~~l~~~~~------------~~~~~~l~~li~~cL~~d  733 (795)
                      .  +............  ...+                   ........+            ......+.+++.+||+.|
T Consensus       239 ~--~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~d  316 (388)
T 3oz6_A          239 Q--LERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFN  316 (388)
T ss_dssp             H--HHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSS
T ss_pred             H--HHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccC
Confidence            1  1111011000000  0000                   000000000            022356889999999999


Q ss_pred             CCCCCCHHHHHHH
Q 003786          734 AADRPTMFEVVSM  746 (795)
Q Consensus       734 P~~RPt~~evl~~  746 (795)
                      |++|||+.|+++|
T Consensus       317 P~~R~t~~e~l~H  329 (388)
T 3oz6_A          317 PNKRISANDALKH  329 (388)
T ss_dssp             GGGSCCHHHHTTS
T ss_pred             cccCCCHHHHhCC
Confidence            9999999999987

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=1.2e-39  Score=351.14  Aligned_cols=268  Identities=23%  Similarity=0.262  Sum_probs=207.6

Q ss_pred             HccCCccccccCcCCcccEEEeEe-cCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeee----cceee
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIE----LEEKI  547 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~  547 (795)
                      ..++|++.+.||+|+||.||+++. .+++.||||++........+.+.+|++++++++||||+++++++..    ....+
T Consensus        27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  106 (317)
T 2buj_A           27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW  106 (317)
T ss_dssp             TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred             CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence            457899999999999999999986 5689999999976665667789999999999999999999999873    45788


Q ss_pred             EEeecCCCCChhhhhhccC-CcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          548 LIYEYMPNKSLDFFLFDST-KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                      +||||+++++|.+++.... ....+++..+..++.||++||.|||+.+   |+||||||+||+++.++.+||+|||++..
T Consensus       107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~dfg~~~~  183 (317)
T 2buj_A          107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQ  183 (317)
T ss_dssp             EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred             EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence            9999999999999886422 2456899999999999999999999998   99999999999999999999999999876


Q ss_pred             cCCCccc-------ccccccccccccccccccccCC---CCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhh
Q 003786          627 FGGDELQ-------SKTKRIVGTYGYMSPEYAQQGL---FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDL  696 (795)
Q Consensus       627 ~~~~~~~-------~~~~~~~gt~~y~APE~~~~~~---~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~  696 (795)
                      .......       .......||+.|+|||++....   ++.++|||||||++|||++|+.||+.............   
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~---  260 (317)
T 2buj_A          184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAV---  260 (317)
T ss_dssp             SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHH---
T ss_pred             cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHh---
Confidence            4321110       0112345799999999987543   78999999999999999999999853211111111000   


Q ss_pred             ccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccccCCCCC
Q 003786          697 WKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPH  756 (795)
Q Consensus       697 ~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~~~l~~  756 (795)
                       ...         ............+.+++.+||+.||.+||++.+++++|+....+.|.
T Consensus       261 -~~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~  310 (317)
T 2buj_A          261 -QNQ---------LSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPG  310 (317)
T ss_dssp             -HCC-----------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC
T ss_pred             -hcc---------CCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCC
Confidence             000         00001112345788999999999999999999999999885544433

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=1.5e-39  Score=350.28  Aligned_cols=261  Identities=21%  Similarity=0.262  Sum_probs=200.0

Q ss_pred             cCCccc-cccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhc-CCcccceeeeeeeecceeeEEee
Q 003786          475 ANFSTE-NKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       475 ~~~~~~-~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      +.|++. +.||+|+||.||+|+.. +++.||||++........+.+.+|+++|.++ +||||+++++++.+.+..++|||
T Consensus        12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e   91 (316)
T 2ac3_A           12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE   91 (316)
T ss_dssp             TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence            568874 78999999999999854 6899999999776666678899999999985 79999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCC---eeeeccccccccC
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMN---PKISDFGMARIFG  628 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~---vkL~DFGla~~~~  628 (795)
                      |+++++|.+++...   ..+++..+..++.||++||+|||+++   |+||||||+|||++.++.   +||+|||++....
T Consensus        92 ~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~  165 (316)
T 2ac3_A           92 KMRGGSILSHIHKR---RHFNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIK  165 (316)
T ss_dssp             CCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESCSSSSCSEEECCTTCCC---
T ss_pred             cCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEEccCCCcCceEEEEccCccccc
Confidence            99999999998543   45889999999999999999999998   999999999999998776   9999999998653


Q ss_pred             CCcc-----ccccccccccccccccccccc-----CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHh--------
Q 003786          629 GDEL-----QSKTKRIVGTYGYMSPEYAQQ-----GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL--------  690 (795)
Q Consensus       629 ~~~~-----~~~~~~~~gt~~y~APE~~~~-----~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~--------  690 (795)
                      ....     ........||+.|+|||++.+     ..++.++|||||||++|||++|+.||...........        
T Consensus       166 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~  245 (316)
T 2ac3_A          166 LNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPAC  245 (316)
T ss_dssp             ----------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHH
T ss_pred             cCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhH
Confidence            2211     111223569999999999875     5689999999999999999999999976543221000        


Q ss_pred             -HhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          691 -GHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       691 -~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                       ............      .+...........+.+++.+||+.||++|||+.|++++-
T Consensus       246 ~~~~~~~i~~~~~------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp  297 (316)
T 2ac3_A          246 QNMLFESIQEGKY------EFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHP  297 (316)
T ss_dssp             HHHHHHHHHHCCC------CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHST
T ss_pred             HHHHHHHHhccCc------ccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcCh
Confidence             000000000000      000011112345788999999999999999999999963

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=1.5e-39  Score=345.31  Aligned_cols=256  Identities=28%  Similarity=0.407  Sum_probs=211.2

Q ss_pred             HccCCccccccCcCCcccEEEeEecC-cceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      ...+|++.+.||+|+||.||+|++.. ++.||||++... ....+.+.+|++++++++||||+++++++.+....++|||
T Consensus        11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   89 (288)
T 3kfa_A           11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE   89 (288)
T ss_dssp             CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred             cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence            45789999999999999999998764 888999999653 3446789999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      |+++++|.+++... ....+++..+..++.||+.||.|||+.+   |+||||||+||+++.++.+||+|||++.......
T Consensus        90 ~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~  165 (288)
T 3kfa_A           90 FMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT  165 (288)
T ss_dssp             CCTTEEHHHHHHHC-CTTTSCHHHHHHHHHHHHHHHHHHHHHT---CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS
T ss_pred             cCCCCcHHHHHHhc-ccCCccHhHHHHHHHHHHHHHHHHHHCC---ccCCCCCcceEEEcCCCCEEEccCccceeccCCc
Confidence            99999999998543 2345889999999999999999999998   9999999999999999999999999998765433


Q ss_pred             ccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCccc
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL  710 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l  710 (795)
                      . .......+|+.|+|||.+.+..++.++||||||+++|+|++ |..|+.........  ...    ...         .
T Consensus       166 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~--~~~----~~~---------~  229 (288)
T 3kfa_A          166 Y-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY--ELL----EKD---------Y  229 (288)
T ss_dssp             S-EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH--HHH----HTT---------C
T ss_pred             c-ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHH--HHH----hcc---------C
Confidence            2 22333567889999999999999999999999999999999 88888754432221  111    000         0


Q ss_pred             cchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       711 ~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      ....+...+..+.+++.+||+.||++||++.|++++|+.
T Consensus       230 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~  268 (288)
T 3kfa_A          230 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET  268 (288)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHH
Confidence            011112234578899999999999999999999999876

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=2.2e-39  Score=367.22  Aligned_cols=261  Identities=22%  Similarity=0.240  Sum_probs=196.9

Q ss_pred             HccCCccccccCcCCcccEEEeEec-CcceEEEEEeccc--CccchHHHHHHHHHHHhcCCcccceeeeeeeec------
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQ--SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL------  543 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------  543 (795)
                      ..++|++.++||+|+||.||+|++. +++.||||++...  .....+++.+|+.+|+.++||||+++++++...      
T Consensus        60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~  139 (464)
T 3ttj_A           60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF  139 (464)
T ss_dssp             EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred             ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence            3578999999999999999999864 5889999999654  233456788999999999999999999998655      


Q ss_pred             ceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccc
Q 003786          544 EEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGM  623 (795)
Q Consensus       544 ~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGl  623 (795)
                      ...++||||++++ |...+.     ..+++..+..++.||+.||+|||+++   |+||||||+||||+.++.+||+|||+
T Consensus       140 ~~~~lv~E~~~~~-l~~~~~-----~~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDlkp~NIll~~~~~~kl~DFG~  210 (464)
T 3ttj_A          140 QDVYLVMELMDAN-LCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL  210 (464)
T ss_dssp             CEEEEEEECCSEE-HHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred             CeEEEEEeCCCCC-HHHHHh-----hcCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChHhEEEeCCCCEEEEEEEe
Confidence            3569999999876 444442     23788999999999999999999998   99999999999999999999999999


Q ss_pred             ccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhcc-----
Q 003786          624 ARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWK-----  698 (795)
Q Consensus       624 a~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~-----  698 (795)
                      ++......   ......||+.|+|||++.+..|+.++|||||||++|||++|+.||...+....  .........     
T Consensus       211 a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~--~~~i~~~lg~p~~~  285 (464)
T 3ttj_A          211 ARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ--WNKVIEQLGTPCPE  285 (464)
T ss_dssp             C-----CC---CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCSCCHH
T ss_pred             eeecCCCc---ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHhcCCCCHH
Confidence            98764332   23446899999999999999999999999999999999999999976542211  100000000     


Q ss_pred             --------------Cc------ccccccCccc---cchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          699 --------------DD------RAWELIDPTL---QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       699 --------------~~------~~~~~id~~l---~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                                    ..      .........+   ...........+.+|+.+||+.||++|||++|+++|-
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp  357 (464)
T 3ttj_A          286 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP  357 (464)
T ss_dssp             HHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTST
T ss_pred             HHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcCh
Confidence                          00      0000000000   0112223356789999999999999999999999973

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=2.1e-39  Score=356.83  Aligned_cols=249  Identities=24%  Similarity=0.269  Sum_probs=194.1

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCc---cchHHHHHHHHH-HHhcCCcccceeeeeeeecceeeE
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG---QGQEEFKNEIKL-IAKLQHRNLVRLLGCCIELEEKIL  548 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~l  548 (795)
                      .++|++.+.||+|+||.||+|+.. +++.||||++.+...   ...+.+.+|..+ ++.++||||+++++++.+.+..++
T Consensus        37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l  116 (373)
T 2r5t_A           37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF  116 (373)
T ss_dssp             GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence            468999999999999999999875 478899999976432   233456677776 567899999999999999999999


Q ss_pred             EeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccC
Q 003786          549 IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      ||||+++|+|.+++..   ...+++..+..++.||+.||.|||+++   |+||||||+|||++.+|.+||+|||+++...
T Consensus       117 v~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~  190 (373)
T 2r5t_A          117 VLDYINGGELFYHLQR---ERCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENI  190 (373)
T ss_dssp             EEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCBCGGGB
T ss_pred             EEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEeeCccccccc
Confidence            9999999999998853   345889999999999999999999998   9999999999999999999999999998643


Q ss_pred             CCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCc
Q 003786          629 GDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP  708 (795)
Q Consensus       629 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~  708 (795)
                      ...  ......+||+.|+|||++.+..++.++|||||||++|||++|..||...+....  ....   ... ..      
T Consensus       191 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~--~~~i---~~~-~~------  256 (373)
T 2r5t_A          191 EHN--STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM--YDNI---LNK-PL------  256 (373)
T ss_dssp             CCC--CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHH--HHHH---HHS-CC------
T ss_pred             cCC--CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHH--HHHH---Hhc-cc------
Confidence            221  234457899999999999999999999999999999999999999965432221  1111   000 00      


Q ss_pred             cccchhhHHHHHHHHHHHHhhccCCCCCCCCHH----HHHHH
Q 003786          709 TLQNEASYLILNRYINVGLLCVQEDAADRPTMF----EVVSM  746 (795)
Q Consensus       709 ~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~----evl~~  746 (795)
                      .    .+......+.+++.+||+.||++||++.    ++++|
T Consensus       257 ~----~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h  294 (373)
T 2r5t_A          257 Q----LKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSH  294 (373)
T ss_dssp             C----CCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTS
T ss_pred             C----CCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCC
Confidence            0    1112234678899999999999999974    55554

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=5.7e-40  Score=356.31  Aligned_cols=261  Identities=28%  Similarity=0.390  Sum_probs=209.0

Q ss_pred             HHccCCccccccCcCCcccEEEeEecC-c-----ceEEEEEecccCc-cchHHHHHHHHHHHhc-CCcccceeeeeeeec
Q 003786          472 AATANFSTENKLGEGGFGPVYKGRLLN-G-----QEVAVKRLSSQSG-QGQEEFKNEIKLIAKL-QHRNLVRLLGCCIEL  543 (795)
Q Consensus       472 ~~~~~~~~~~~LG~G~~g~Vy~~~~~~-~-----~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~  543 (795)
                      ...++|++.+.||+|+||.||+|+... +     +.||+|++..... ...+.+.+|+.+++++ +||||+++++++.+.
T Consensus        43 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~  122 (333)
T 2i1m_A           43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHG  122 (333)
T ss_dssp             CCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             CCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecC
Confidence            345789999999999999999998642 2     4799999975432 3456789999999999 899999999999999


Q ss_pred             ceeeEEeecCCCCChhhhhhccCC-----------cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECC
Q 003786          544 EEKILIYEYMPNKSLDFFLFDSTK-----------ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDK  612 (795)
Q Consensus       544 ~~~~lv~E~~~~gsL~~~l~~~~~-----------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~  612 (795)
                      +..++||||+++++|.+++.....           ...+++..+..++.||+.||.|||+++   |+||||||+|||++.
T Consensus       123 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~  199 (333)
T 2i1m_A          123 GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTN  199 (333)
T ss_dssp             SSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGCEEEG
T ss_pred             CceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCcccceEEECC
Confidence            999999999999999999864321           245788999999999999999999998   999999999999999


Q ss_pred             CCCeeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhH
Q 003786          613 DMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLG  691 (795)
Q Consensus       613 ~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~  691 (795)
                      ++.+||+|||++................+|+.|+|||.+.+..++.++|||||||++|||++ |..|+.......... .
T Consensus       200 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~-~  278 (333)
T 2i1m_A          200 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFY-K  278 (333)
T ss_dssp             GGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHH-H
T ss_pred             CCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHH-H
Confidence            99999999999986543332223334567889999999999999999999999999999998 888887544332211 1


Q ss_pred             hHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          692 HAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       692 ~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      ....    ..         ....+...+..+.+++.+||+.||.+|||+.||+++|+.
T Consensus       279 ~~~~----~~---------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~  323 (333)
T 2i1m_A          279 LVKD----GY---------QMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE  323 (333)
T ss_dssp             HHHH----TC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHhc----CC---------CCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHH
Confidence            1100    00         000111123567889999999999999999999999976

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=4.8e-39  Score=369.26  Aligned_cols=253  Identities=25%  Similarity=0.331  Sum_probs=208.3

Q ss_pred             HccCCccccccCcCCcccEEEeEec-CcceEEEEEeccc---CccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeE
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQ---SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKIL  548 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  548 (795)
                      ..++|++.+.||+|+||.||+|+.. +|+.||||++.+.   .......+.+|+.+|++++||||+++++++.+.+..++
T Consensus       182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l  261 (576)
T 2acx_A          182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL  261 (576)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence            3467999999999999999999875 6899999999653   23345678899999999999999999999999999999


Q ss_pred             EeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccC
Q 003786          549 IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      ||||+++|+|..++.... ...+++..+..++.||+.||.|||+++   |+||||||+||||+.+|.+||+|||+++...
T Consensus       262 VmEy~~gg~L~~~l~~~~-~~~l~e~~~~~i~~qIl~aL~yLH~~g---IvHrDLKPeNILld~~g~vKL~DFGla~~~~  337 (576)
T 2acx_A          262 VLTLMNGGDLKFHIYHMG-QAGFPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVP  337 (576)
T ss_dssp             EECCCCSCBHHHHHHSSS-SCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EEEcCCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCchheEEEeCCCCeEEEecccceecc
Confidence            999999999999885432 344899999999999999999999998   9999999999999999999999999998765


Q ss_pred             CCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcch--hHhHhHhhhccCccccccc
Q 003786          629 GDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSL--TLLGHAWDLWKDDRAWELI  706 (795)
Q Consensus       629 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~i  706 (795)
                      ...   .....+||+.|+|||++.+..|+.++|||||||++|||++|+.||........  ........  ...      
T Consensus       338 ~~~---~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~--~~~------  406 (576)
T 2acx_A          338 EGQ---TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE--VPE------  406 (576)
T ss_dssp             TTC---CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHH--CCC------
T ss_pred             cCc---cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhc--ccc------
Confidence            332   22345899999999999999999999999999999999999999976543211  11111100  000      


Q ss_pred             CccccchhhHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHH
Q 003786          707 DPTLQNEASYLILNRYINVGLLCVQEDAADRP-----TMFEVVSM  746 (795)
Q Consensus       707 d~~l~~~~~~~~~~~l~~li~~cL~~dP~~RP-----t~~evl~~  746 (795)
                            ..+......+.++|.+||+.||++||     ++.||++|
T Consensus       407 ------~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H  445 (576)
T 2acx_A          407 ------EYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH  445 (576)
T ss_dssp             ------CCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred             ------cCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence                  01122345778999999999999999     78999986

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=6.3e-39  Score=339.72  Aligned_cols=252  Identities=22%  Similarity=0.307  Sum_probs=204.1

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      .++|++.+.||+|+||.||+|... +++.||+|++....  ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   84 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   84 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence            478999999999999999999865 58899999986542  233467889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCC---eeeecccccccc
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMN---PKISDFGMARIF  627 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~---vkL~DFGla~~~  627 (795)
                      ||+++++|.+.+..   ...+++..+..++.||+.||.|||+.+   |+||||||+||+++.++.   +||+|||++...
T Consensus        85 e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~  158 (284)
T 3kk8_A           85 DLVTGGELFEDIVA---REFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEV  158 (284)
T ss_dssp             CCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred             ecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEc
Confidence            99999999888743   345889999999999999999999998   999999999999987655   999999999876


Q ss_pred             CCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccC
Q 003786          628 GGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID  707 (795)
Q Consensus       628 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id  707 (795)
                      ....   ......||+.|+|||++.+..++.++||||||+++|+|++|+.||........  ......    ... ... 
T Consensus       159 ~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~~~~~----~~~-~~~-  227 (284)
T 3kk8_A          159 NDSE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL--YAQIKA----GAY-DYP-  227 (284)
T ss_dssp             CSSC---BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHH----TCC-CCC-
T ss_pred             ccCc---cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHH--HHHHHh----ccc-cCC-
Confidence            5332   22346799999999999999999999999999999999999999865432221  111100    000 000 


Q ss_pred             ccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          708 PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       708 ~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                          ..........+.+++.+||+.||++|||+.|++++
T Consensus       228 ----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  262 (284)
T 3kk8_A          228 ----SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV  262 (284)
T ss_dssp             ----TTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             ----chhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence                00111233567899999999999999999999985

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=1.2e-39  Score=344.41  Aligned_cols=256  Identities=30%  Similarity=0.430  Sum_probs=207.7

Q ss_pred             ccCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecC
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYM  553 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  553 (795)
                      .++|++.+.||+|+||.||+|+..+++.||||++.... ...+.+.+|++++++++||||+++++++. .+..++||||+
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~   89 (279)
T 1qpc_A           12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYM   89 (279)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred             HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecC
Confidence            46899999999999999999998888899999996543 45678999999999999999999999976 45689999999


Q ss_pred             CCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccc
Q 003786          554 PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ  633 (795)
Q Consensus       554 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~  633 (795)
                      ++++|.+++... ....+++..+..++.||++||.|||+++   |+||||||+||+++.++.+||+|||++........ 
T Consensus        90 ~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-  164 (279)
T 1qpc_A           90 ENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-  164 (279)
T ss_dssp             TTCBHHHHTTSH-HHHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE-
T ss_pred             CCCCHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHhhEEEcCCCCEEECCCcccccccCccc-
Confidence            999999998432 1235889999999999999999999998   99999999999999999999999999987654332 


Q ss_pred             ccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCccccc
Q 003786          634 SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQN  712 (795)
Q Consensus       634 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~  712 (795)
                      .......+++.|+|||.+.+..++.++||||||+++|||++ |+.|+.......  .....    ....  .       .
T Consensus       165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~~~~----~~~~--~-------~  229 (279)
T 1qpc_A          165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VIQNL----ERGY--R-------M  229 (279)
T ss_dssp             ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHHH----HTTC--C-------C
T ss_pred             ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHH--HHHHH----hccc--C-------C
Confidence            12233457889999999998899999999999999999999 888886543221  11111    0010  0       0


Q ss_pred             hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcccc
Q 003786          713 EASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKT  751 (795)
Q Consensus       713 ~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~  751 (795)
                      ..+...+..+.+++.+||+.+|++|||+.++++.|+...
T Consensus       230 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  268 (279)
T 1qpc_A          230 VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF  268 (279)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence            011123457889999999999999999999999997743

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=5.4e-39  Score=351.97  Aligned_cols=257  Identities=23%  Similarity=0.278  Sum_probs=204.6

Q ss_pred             ccCCccccccCcCCcccEEEeEe----cCcceEEEEEecccC----ccchHHHHHHHHHHHhc-CCcccceeeeeeeecc
Q 003786          474 TANFSTENKLGEGGFGPVYKGRL----LNGQEVAVKRLSSQS----GQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELE  544 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~  544 (795)
                      .++|++.++||+|+||.||+++.    .+++.||||++.+..    ....+.+.+|+++|+++ +||||+++++++....
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  132 (355)
T 1vzo_A           53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET  132 (355)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred             ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence            46899999999999999999986    368999999987532    23456788899999999 6999999999999999


Q ss_pred             eeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccc
Q 003786          545 EKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMA  624 (795)
Q Consensus       545 ~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla  624 (795)
                      ..++||||+++++|.+++...   ..+++..+..++.||++||.|||+++   |+||||||+||||+.++.+||+|||++
T Consensus       133 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DfG~a  206 (355)
T 1vzo_A          133 KLHLILDYINGGELFTHLSQR---ERFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLS  206 (355)
T ss_dssp             EEEEEECCCCSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred             eEEEEeecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCcEEEeeCCCC
Confidence            999999999999999998543   45889999999999999999999998   999999999999999999999999999


Q ss_pred             cccCCCccccccccccccccccccccccc--CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCccc
Q 003786          625 RIFGGDELQSKTKRIVGTYGYMSPEYAQQ--GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRA  702 (795)
Q Consensus       625 ~~~~~~~~~~~~~~~~gt~~y~APE~~~~--~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~  702 (795)
                      +.+..... .......||+.|+|||++.+  ..++.++|||||||++|||++|+.||........... ........   
T Consensus       207 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~-~~~~~~~~---  281 (355)
T 1vzo_A          207 KEFVADET-ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAE-ISRRILKS---  281 (355)
T ss_dssp             EECCGGGG-GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHH-HHHHHHHC---
T ss_pred             eecccCCC-CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHH-HHHHHhcc---
Confidence            86543222 22334679999999999985  4578999999999999999999999975442221111 00010000   


Q ss_pred             ccccCccccchhhHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHHHcc
Q 003786          703 WELIDPTLQNEASYLILNRYINVGLLCVQEDAADRP-----TMFEVVSMLTN  749 (795)
Q Consensus       703 ~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RP-----t~~evl~~L~~  749 (795)
                          .+    ..+......+.+++.+||+.||++||     +++|++++.-.
T Consensus       282 ----~~----~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f  325 (355)
T 1vzo_A          282 ----EP----PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFF  325 (355)
T ss_dssp             ----CC----CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGG
T ss_pred             ----CC----CCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcch
Confidence                00    11122335677899999999999999     99999997644

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.7e-39  Score=351.41  Aligned_cols=265  Identities=21%  Similarity=0.288  Sum_probs=196.2

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccCcc-chHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQ-GQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      ++|++.++||+|+||.||+|+.. +++.||||++...... ....+.+|+++|++++||||+++++++.+.+..++||||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            57999999999999999999875 6889999999654322 223456799999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      +++ +|.+++...  ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++....... 
T Consensus        82 ~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~-  154 (324)
T 3mtl_A           82 LDK-DLKQYLDDC--GNIINMHNVKLFLFQLLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPT-  154 (324)
T ss_dssp             CSE-EHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCCGGGEEECTTCCEEECSSSEEECC-----
T ss_pred             ccc-CHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCcCHHHEEECCCCCEEEccCcccccccCCc-
Confidence            985 777777433  345889999999999999999999998   9999999999999999999999999998654322 


Q ss_pred             ccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhH-hHhHhhhccCcccccccC---
Q 003786          633 QSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTL-LGHAWDLWKDDRAWELID---  707 (795)
Q Consensus       633 ~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~id---  707 (795)
                       .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.......... ..................   
T Consensus       155 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  233 (324)
T 3mtl_A          155 -KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEE  233 (324)
T ss_dssp             ---------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHH
T ss_pred             -cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchh
Confidence             12234578999999999876 678999999999999999999999997654322211 111000000000000000   


Q ss_pred             ------cccc----chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          708 ------PTLQ----NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       708 ------~~l~----~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                            +...    ..........+.+++.+||+.||++|||++|++++-
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp  283 (324)
T 3mtl_A          234 FKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHP  283 (324)
T ss_dssp             HHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSG
T ss_pred             hcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcCh
Confidence                  0000    011122345678999999999999999999999963

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=8.9e-40  Score=346.01  Aligned_cols=255  Identities=23%  Similarity=0.331  Sum_probs=194.5

Q ss_pred             HccCCccccccCcCCcccEEEeEecC----cceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceee
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLLN----GQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKI  547 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  547 (795)
                      ..++|++.+.||+|+||.||+|++..    +..||+|++.... ....+.+.+|+.++++++||||+++++++ ..+..+
T Consensus        13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~   91 (281)
T 1mp8_A           13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVW   91 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCE
T ss_pred             ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCccE
Confidence            34789999999999999999998643    4569999986543 33456789999999999999999999997 456789


Q ss_pred             EEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccccc
Q 003786          548 LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF  627 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~  627 (795)
                      +||||+++++|.+++...  ...+++..+..++.||++||.|||+.+   |+||||||+|||++.++.+||+|||+++..
T Consensus        92 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  166 (281)
T 1mp8_A           92 IIMELCTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYM  166 (281)
T ss_dssp             EEEECCTTEEHHHHHHHT--TTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC-------
T ss_pred             EEEecCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHEEECCCCCEEECcccccccc
Confidence            999999999999998543  335889999999999999999999998   999999999999999999999999999876


Q ss_pred             CCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCccccccc
Q 003786          628 GGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELI  706 (795)
Q Consensus       628 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i  706 (795)
                      ...... ......+++.|+|||++....++.++|||||||++|||++ |..||........  ....    ......   
T Consensus       167 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~--~~~i----~~~~~~---  236 (281)
T 1mp8_A          167 EDSTYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV--IGRI----ENGERL---  236 (281)
T ss_dssp             -------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH--HHHH----HTTCCC---
T ss_pred             Cccccc-ccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHH--HHHH----HcCCCC---
Confidence            433221 2233457889999999998999999999999999999996 8889875443222  1111    001000   


Q ss_pred             CccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          707 DPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       707 d~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                            ..+...+..+.+++.+||+.||++|||+.|++++|+.
T Consensus       237 ------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~  273 (281)
T 1mp8_A          237 ------PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST  273 (281)
T ss_dssp             ------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence                  1112234567889999999999999999999999876

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=2.5e-39  Score=342.09  Aligned_cols=249  Identities=25%  Similarity=0.348  Sum_probs=201.9

Q ss_pred             HccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeE
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKIL  548 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  548 (795)
                      ..++|++.+.||+|+||.||+|+.. +++.||||++....   ......+.+|+.++++++||||+++++++.+....++
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   86 (279)
T 3fdn_A            7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL   86 (279)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence            3578999999999999999999865 47789999986532   2345678999999999999999999999999999999


Q ss_pred             EeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccC
Q 003786          549 IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      ||||+++++|.+++...   ..+++..+..++.||+.||.|||+.+   |+||||||+||+++.++.+||+|||++....
T Consensus        87 v~e~~~~~~l~~~l~~~---~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~  160 (279)
T 3fdn_A           87 ILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAP  160 (279)
T ss_dssp             EECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTTT---CEECCCCGGGEEECTTSCEEECSCCEESCC-
T ss_pred             EEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHhEEEcCCCCEEEEeccccccCC
Confidence            99999999999888533   45889999999999999999999988   9999999999999999999999999986543


Q ss_pred             CCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCc
Q 003786          629 GDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP  708 (795)
Q Consensus       629 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~  708 (795)
                      ..    ......|++.|+|||.+.+..++.++||||||+++|+|++|..||........  ......    .      ..
T Consensus       161 ~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~----~------~~  224 (279)
T 3fdn_A          161 SS----RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--YKRISR----V------EF  224 (279)
T ss_dssp             -----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH--HHHHHH----T------CC
T ss_pred             cc----cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHH--HHHHHh----C------CC
Confidence            22    22345789999999999999999999999999999999999999875432211  111000    0      00


Q ss_pred             cccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          709 TLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       709 ~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                          ..+......+.+++.+||+.+|++|||++|++++.
T Consensus       225 ----~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~  259 (279)
T 3fdn_A          225 ----TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP  259 (279)
T ss_dssp             ----CCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCH
T ss_pred             ----CCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCc
Confidence                01112335677899999999999999999999863

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.5e-39  Score=352.31  Aligned_cols=257  Identities=26%  Similarity=0.423  Sum_probs=198.6

Q ss_pred             ccCCccccccCcCCcccEEEeEec-Ccce----EEEEEeccc-CccchHHHHHHHHHHHhcCCcccceeeeeeeecceee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQE----VAVKRLSSQ-SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKI  547 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  547 (795)
                      .++|++.++||+|+||.||+|++. +++.    ||+|.+... .....+.+.+|+.++++++||||+++++++.... .+
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~   92 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ   92 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence            367999999999999999999854 4554    467766443 3445678999999999999999999999998754 78


Q ss_pred             EEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccccc
Q 003786          548 LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF  627 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~  627 (795)
                      +|+||+++++|.+++...  ...+++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++..
T Consensus        93 ~v~~~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~  167 (327)
T 3lzb_A           93 LITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL  167 (327)
T ss_dssp             EEECCCSSCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTC----
T ss_pred             EEEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhhCC---CcCCCCCHHHEEEcCCCCEEEccCcceeEc
Confidence            999999999999988543  345889999999999999999999998   999999999999999999999999999876


Q ss_pred             CCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCccccccc
Q 003786          628 GGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELI  706 (795)
Q Consensus       628 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i  706 (795)
                      .............+|+.|+|||.+.+..++.++|||||||++|||++ |..||...........  .    ....     
T Consensus       168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~--~----~~~~-----  236 (327)
T 3lzb_A          168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI--L----EKGE-----  236 (327)
T ss_dssp             ------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHH--H----HTTC-----
T ss_pred             cCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH--H----HcCC-----
Confidence            54433333344567889999999999999999999999999999999 9999876543332111  1    0010     


Q ss_pred             CccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcccc
Q 003786          707 DPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKT  751 (795)
Q Consensus       707 d~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~  751 (795)
                          ....+......+.+++.+||+.||++||++.|+++.|....
T Consensus       237 ----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  277 (327)
T 3lzb_A          237 ----RLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMA  277 (327)
T ss_dssp             ----CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ----CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence                00111223346788999999999999999999999998743

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=1.2e-38  Score=365.25  Aligned_cols=254  Identities=25%  Similarity=0.325  Sum_probs=207.7

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      .++|++.+.||+|+||.||+|+.. +|+.||||++.+..   ....+.+.+|+.+|++++||||+++++++.+.+..++|
T Consensus       184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  263 (543)
T 3c4z_A          184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV  263 (543)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence            467999999999999999999875 58999999996542   23456788999999999999999999999999999999


Q ss_pred             eecCCCCChhhhhhccCC-cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccC
Q 003786          550 YEYMPNKSLDFFLFDSTK-ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      |||+++|+|..++..... ...+++..+..++.||+.||.|||+++   |+||||||+||||+.+|.+||+|||+++...
T Consensus       264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g---IvHrDLKP~NILl~~~g~vkL~DFGla~~~~  340 (543)
T 3c4z_A          264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELK  340 (543)
T ss_dssp             ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC---CcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence            999999999998865432 346899999999999999999999998   9999999999999999999999999998765


Q ss_pred             CCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcch--hHhHhHhhhccCccccccc
Q 003786          629 GDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSL--TLLGHAWDLWKDDRAWELI  706 (795)
Q Consensus       629 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~i  706 (795)
                      ....  .....+||+.|+|||++.+..|+.++|||||||++|||++|+.||........  .+....   ... ..    
T Consensus       341 ~~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i---~~~-~~----  410 (543)
T 3c4z_A          341 AGQT--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV---LEQ-AV----  410 (543)
T ss_dssp             TTCC--CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHH---HHC-CC----
T ss_pred             CCCc--ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHH---hhc-cc----
Confidence            3321  23346899999999999999999999999999999999999999976542211  111111   000 00    


Q ss_pred             CccccchhhHHHHHHHHHHHHhhccCCCCCCCCH-----HHHHHH
Q 003786          707 DPTLQNEASYLILNRYINVGLLCVQEDAADRPTM-----FEVVSM  746 (795)
Q Consensus       707 d~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~-----~evl~~  746 (795)
                            ..+...+..+.+++.+||+.||++||++     .+|++|
T Consensus       411 ------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~H  449 (543)
T 3c4z_A          411 ------TYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTH  449 (543)
T ss_dssp             ------CCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred             ------CCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcC
Confidence                  0112234567889999999999999965     778765

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=5.5e-39  Score=353.23  Aligned_cols=269  Identities=17%  Similarity=0.189  Sum_probs=202.6

Q ss_pred             HccCCccccccCcCCcccEEEeEecC------cceEEEEEecccCccc-----------hHHHHHHHHHHHhcCCcccce
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLLN------GQEVAVKRLSSQSGQG-----------QEEFKNEIKLIAKLQHRNLVR  535 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~  535 (795)
                      ..++|++.++||+|+||.||+|++..      ++.||||++.......           ...+..|+..+..++||||++
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~  112 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK  112 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence            34689999999999999999998754      4789999986543211           112334566677788999999


Q ss_pred             eeeeeeec----ceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEEC
Q 003786          536 LLGCCIEL----EEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLD  611 (795)
Q Consensus       536 l~~~~~~~----~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~  611 (795)
                      +++++.+.    ...++||||+ +++|.+++...  ...+++..+..++.||+.||.|||+++   |+||||||+|||++
T Consensus       113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~~~---iiHrDlkp~Nill~  186 (364)
T 3op5_A          113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN--AKRFSRKTVLQLSLRILDILEYIHEHE---YVHGDIKASNLLLN  186 (364)
T ss_dssp             EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEE
T ss_pred             EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEEecCCHHHEEEe
Confidence            99998875    4589999999 99999998542  345899999999999999999999998   99999999999999


Q ss_pred             --CCCCeeeeccccccccCCCccc-----ccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCC
Q 003786          612 --KDMNPKISDFGMARIFGGDELQ-----SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNT  684 (795)
Q Consensus       612 --~~~~vkL~DFGla~~~~~~~~~-----~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~  684 (795)
                        .++.+||+|||+++.+......     .......||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus       187 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~  266 (364)
T 3op5_A          187 YKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLK  266 (364)
T ss_dssp             SSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT
T ss_pred             cCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccccc
Confidence              8899999999999876432211     112335699999999999999999999999999999999999999975332


Q ss_pred             cchhHhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccccC
Q 003786          685 NSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTI  752 (795)
Q Consensus       685 ~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~~  752 (795)
                      .... ........ .....+++++.+..   ...+..+.+++..||+.+|++||++.+|+++|+....
T Consensus       267 ~~~~-~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~  329 (364)
T 3op5_A          267 DPKY-VRDSKIRY-RENIASLMDKCFPA---ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLK  329 (364)
T ss_dssp             CHHH-HHHHHHHH-HHCHHHHHHHHSCT---TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred             CHHH-HHHHHHHh-hhhHHHHHHHhccc---ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Confidence            2221 11111000 01111122211110   1224578899999999999999999999999876433

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=2.7e-39  Score=355.08  Aligned_cols=271  Identities=24%  Similarity=0.244  Sum_probs=208.9

Q ss_pred             CcccHHhHHHHccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcC-----Cccccee
Q 003786          463 PMFSLASVSAATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQ-----HRNLVRL  536 (795)
Q Consensus       463 ~~~~~~~i~~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~l  536 (795)
                      ..+++.......++|++.++||+|+||.||+|+.. +++.||||++... ....+.+..|+.++++++     ||||+++
T Consensus        23 ~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~  101 (360)
T 3llt_A           23 VHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKY  101 (360)
T ss_dssp             GSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCE
T ss_pred             eeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecc
Confidence            34455555566789999999999999999999874 5889999999642 334567788999999997     9999999


Q ss_pred             eeeeeecceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECC----
Q 003786          537 LGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDK----  612 (795)
Q Consensus       537 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~----  612 (795)
                      ++++...+..++||||+ +++|.+++.... ...+++..+..++.||+.||+|||+.+   |+||||||+|||++.    
T Consensus       102 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~  176 (360)
T 3llt_A          102 HGKFMYYDHMCLIFEPL-GPSLYEIITRNN-YNGFHIEDIKLYCIEILKALNYLRKMS---LTHTDLKPENILLDDPYFE  176 (360)
T ss_dssp             EEEEEETTEEEEEECCC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCTTCC
T ss_pred             cceeeECCeeEEEEcCC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCcccEEEcccccc
Confidence            99999999999999999 999999885433 234889999999999999999999998   999999999999975    


Q ss_pred             ---------------------CCCeeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHH
Q 003786          613 ---------------------DMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLE  671 (795)
Q Consensus       613 ---------------------~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~e  671 (795)
                                           ++.+||+|||++......     .....||+.|+|||++.+..++.++|||||||++|+
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e  251 (360)
T 3llt_A          177 KSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY-----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAE  251 (360)
T ss_dssp             EEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC-----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHH
T ss_pred             ccccchhcccccccccccccCCCCEEEEeccCceecCCC-----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHH
Confidence                                 789999999999864422     234678999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCCCcchhHhHhHhhhccC--------------------cccccccCcccc------------chhhHHHH
Q 003786          672 TLSSKRNTDFSNTNSLTLLGHAWDLWKD--------------------DRAWELIDPTLQ------------NEASYLIL  719 (795)
Q Consensus       672 lltG~~p~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~id~~l~------------~~~~~~~~  719 (795)
                      |++|+.||........  ..........                    ............            ........
T Consensus       252 ll~g~~pf~~~~~~~~--~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  329 (360)
T 3llt_A          252 LYTGSLLFRTHEHMEH--LAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKH  329 (360)
T ss_dssp             HHHSSCSCCCSSHHHH--HHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCC
T ss_pred             HHHCCCCCCCCcHHHH--HHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchH
Confidence            9999999975442211  1110000000                    000000000000            00011112


Q ss_pred             HHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          720 NRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       720 ~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ..+.+++.+||+.||++|||+.|++++
T Consensus       330 ~~l~~li~~~L~~dP~~Rpta~elL~h  356 (360)
T 3llt_A          330 ELFCDFLYSILQIDPTLRPSPAELLKH  356 (360)
T ss_dssp             HHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             HHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence            567799999999999999999999874

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=8.3e-39  Score=358.31  Aligned_cols=254  Identities=22%  Similarity=0.283  Sum_probs=193.5

Q ss_pred             HHccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC--------ccchHHHHHHHHHHHhcCCcccceeeeeeee
Q 003786          472 AATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--------GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIE  542 (795)
Q Consensus       472 ~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~  542 (795)
                      ...++|.+.+.||+|+||.||+|... +++.||||++.+..        ......+.+|+.+|++++||||+++++++. 
T Consensus       132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-  210 (419)
T 3i6u_A          132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-  210 (419)
T ss_dssp             HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred             hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence            34578999999999999999999864 58899999986532        122335889999999999999999999975 


Q ss_pred             cceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCC---Ceeee
Q 003786          543 LEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDM---NPKIS  619 (795)
Q Consensus       543 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~---~vkL~  619 (795)
                      .+..++||||+++++|.+++.   ....+++..+..++.||++||+|||+++   |+||||||+|||++.++   .+||+
T Consensus       211 ~~~~~lv~e~~~~g~L~~~l~---~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kl~  284 (419)
T 3i6u_A          211 AEDYYIVLELMEGGELFDKVV---GNKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKIT  284 (419)
T ss_dssp             SSEEEEEEECCTTCBGGGGTS---SSCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSSSCCEEEC
T ss_pred             cCceEEEEEcCCCCcHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCCCcceEEEe
Confidence            456799999999999988884   3456899999999999999999999998   99999999999997544   59999


Q ss_pred             ccccccccCCCccccccccccccccccccccccc---CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhh
Q 003786          620 DFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQ---GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDL  696 (795)
Q Consensus       620 DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~---~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~  696 (795)
                      |||+++......   ......||+.|+|||++.+   ..++.++|||||||++|+|++|+.||......... ....   
T Consensus       285 DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~-~~~i---  357 (419)
T 3i6u_A          285 DFGHSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL-KDQI---  357 (419)
T ss_dssp             CSSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCH-HHHH---
T ss_pred             ecccceecCCCc---cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHH-HHHH---
Confidence            999998765332   2344679999999999853   67889999999999999999999999754322211 1100   


Q ss_pred             ccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          697 WKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       697 ~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                       .....      .............+.+++.+||+.||++|||+.|++++
T Consensus       358 -~~~~~------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  400 (419)
T 3i6u_A          358 -TSGKY------NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH  400 (419)
T ss_dssp             -HTTCC------CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             -hcCCC------CCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence             00000      00011112234678899999999999999999999985

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=2.4e-39  Score=351.88  Aligned_cols=243  Identities=22%  Similarity=0.282  Sum_probs=201.7

Q ss_pred             HccCCccccccCcCCcccEEEeEe-cCcceEEEEEecccCc--------cchHHHHHHHHHHHhcCCcccceeeeeeeec
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSG--------QGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL  543 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  543 (795)
                      ..++|++.+.||+|+||.||+|+. .+++.||||++.....        ...+.+.+|+.+|++++||||+++++++.+.
T Consensus        22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~  101 (335)
T 3dls_A           22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ  101 (335)
T ss_dssp             HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred             cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence            347899999999999999999985 4688999999975431        1345678899999999999999999999999


Q ss_pred             ceeeEEeecCCCC-ChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccc
Q 003786          544 EEKILIYEYMPNK-SLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFG  622 (795)
Q Consensus       544 ~~~~lv~E~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFG  622 (795)
                      +..++||||+.+| +|..++..   ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||
T Consensus       102 ~~~~lv~e~~~~g~~l~~~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg  175 (335)
T 3dls_A          102 GFFQLVMEKHGSGLDLFAFIDR---HPRLDEPLASYIFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFG  175 (335)
T ss_dssp             SEEEEEEECCTTSCBHHHHHHT---CCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCT
T ss_pred             CEEEEEEEeCCCCccHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEEeccCHHHEEEcCCCcEEEeecc
Confidence            9999999999777 99888843   345899999999999999999999998   9999999999999999999999999


Q ss_pred             cccccCCCcccccccccccccccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcc
Q 003786          623 MARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLF-SIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDR  701 (795)
Q Consensus       623 la~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~-~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~  701 (795)
                      ++.......   ......||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.......               
T Consensus       176 ~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---------------  237 (335)
T 3dls_A          176 SAAYLERGK---LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETV---------------  237 (335)
T ss_dssp             TCEECCTTC---CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGT---------------
T ss_pred             cceECCCCC---ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHH---------------
Confidence            998765432   2234679999999999988776 889999999999999999999985311100               


Q ss_pred             cccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          702 AWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       702 ~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                       .....      .+......+.+++.+||+.||++|||+.|++++
T Consensus       238 -~~~~~------~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h  275 (335)
T 3dls_A          238 -EAAIH------PPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD  275 (335)
T ss_dssp             -TTCCC------CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred             -hhccC------CCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence             00000      011123567899999999999999999999996

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=3e-39  Score=351.82  Aligned_cols=252  Identities=20%  Similarity=0.270  Sum_probs=201.2

Q ss_pred             HccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhc-CCcccceeeeeeeecceeeEEe
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      ..++|++.+.||+|+||.||+++.. +++.||||++.+...    ...+|+++|.++ +||||+++++++.+....++||
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~   95 (342)
T 2qr7_A           20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT   95 (342)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred             ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence            3467999999999999999999875 588999999965432    345788889888 7999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCC-C---Ceeeeccccccc
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKD-M---NPKISDFGMARI  626 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~-~---~vkL~DFGla~~  626 (795)
                      ||+++|+|.+++..   .+.+++..+..++.||+.||.|||+++   |+||||||+|||+..+ +   .+||+|||+++.
T Consensus        96 E~~~gg~L~~~i~~---~~~~~~~~~~~~~~qi~~al~~lH~~g---ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~  169 (342)
T 2qr7_A           96 ELMKGGELLDKILR---QKFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQ  169 (342)
T ss_dssp             CCCCSCBHHHHHHT---CTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSCSGGGEEECCCTTCEE
T ss_pred             eCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cEeccCCHHHEEEecCCCCcCeEEEEECCCccc
Confidence            99999999998853   345899999999999999999999998   9999999999998543 3   499999999987


Q ss_pred             cCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcch-hHhHhHhhhccCcccccc
Q 003786          627 FGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSL-TLLGHAWDLWKDDRAWEL  705 (795)
Q Consensus       627 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~  705 (795)
                      .....  .......||+.|+|||++.+..++.++|||||||++|||++|..||........ .+....    ..+..   
T Consensus       170 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i----~~~~~---  240 (342)
T 2qr7_A          170 LRAEN--GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARI----GSGKF---  240 (342)
T ss_dssp             CBCTT--CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHH----HHCCC---
T ss_pred             CcCCC--CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHH----ccCCc---
Confidence            64332  123346789999999999888899999999999999999999999975432222 111111    00110   


Q ss_pred             cCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          706 IDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       706 id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                         .+...........+.+++.+||+.||++||++.|++++
T Consensus       241 ---~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h  278 (342)
T 2qr7_A          241 ---SLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH  278 (342)
T ss_dssp             ---CCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred             ---ccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence               00111112234567899999999999999999999985

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=9.2e-39  Score=355.52  Aligned_cols=271  Identities=20%  Similarity=0.246  Sum_probs=212.6

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecc--eeeEE
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELE--EKILI  549 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv  549 (795)
                      .++|++.++||+|+||.||+|+.. +++.||||++.... ....+.+.+|+++|++++||||+++++++.+..  ..++|
T Consensus         8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv   87 (396)
T 4eut_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI   87 (396)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence            467999999999999999999875 48999999997543 344577889999999999999999999998765  67999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEE----CCCCCeeeecccccc
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILL----DKDMNPKISDFGMAR  625 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll----~~~~~vkL~DFGla~  625 (795)
                      |||+++++|.+++........+++..+..++.||+.||.|||+.+   |+||||||+|||+    +.++.+||+|||+++
T Consensus        88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~  164 (396)
T 4eut_A           88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR  164 (396)
T ss_dssp             ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred             EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC---EEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence            999999999999966554455899999999999999999999998   9999999999999    777889999999998


Q ss_pred             ccCCCccccccccccccccccccccccc--------CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcch--hHhHhHhh
Q 003786          626 IFGGDELQSKTKRIVGTYGYMSPEYAQQ--------GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSL--TLLGHAWD  695 (795)
Q Consensus       626 ~~~~~~~~~~~~~~~gt~~y~APE~~~~--------~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~--~~~~~~~~  695 (795)
                      ......   ......||+.|+|||++.+        ..++.++|||||||++|||++|+.||........  ........
T Consensus       165 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~  241 (396)
T 4eut_A          165 ELEDDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT  241 (396)
T ss_dssp             ECCCGG---GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHH
T ss_pred             EccCCC---ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhc
Confidence            765432   2234679999999998865        5678999999999999999999999864332111  11111111


Q ss_pred             hccCcccccc---c--------CccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          696 LWKDDRAWEL---I--------DPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       696 ~~~~~~~~~~---i--------d~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                      ..........   .        +..............+.+++.+||+.||++||++.|+++.+...
T Consensus       242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~i  307 (396)
T 4eut_A          242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI  307 (396)
T ss_dssp             SCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred             CCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHH
Confidence            0000000000   0        00111234466778889999999999999999999999987663

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=6e-39  Score=340.52  Aligned_cols=253  Identities=23%  Similarity=0.352  Sum_probs=199.3

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      .++|.+.++||+|+||.||+++.. +++.+|+|++.... ....+.+.+|+++|++++||||+++++++.+....++|||
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e  100 (285)
T 3is5_A           21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME  100 (285)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence            367999999999999999999864 58899999986643 3456789999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccC-CcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEE---CCCCCeeeecccccccc
Q 003786          552 YMPNKSLDFFLFDST-KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILL---DKDMNPKISDFGMARIF  627 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll---~~~~~vkL~DFGla~~~  627 (795)
                      |+++++|.+.+.... ....+++..+..++.||++||.|||+.+   |+||||||+||++   +.++.+||+|||++...
T Consensus       101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~  177 (285)
T 3is5_A          101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELF  177 (285)
T ss_dssp             CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred             eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence            999999988885432 2356899999999999999999999998   9999999999999   45688999999999865


Q ss_pred             CCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccC
Q 003786          628 GGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID  707 (795)
Q Consensus       628 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id  707 (795)
                      ....   ......||+.|+|||++. ..++.++|||||||++|||++|+.||.........  ...  ........ ...
T Consensus       178 ~~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~--~~~--~~~~~~~~-~~~  248 (285)
T 3is5_A          178 KSDE---HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQ--QKA--TYKEPNYA-VEC  248 (285)
T ss_dssp             ------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH--HHH--HHCCCCCC-C--
T ss_pred             CCcc---cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHH--hhh--ccCCcccc-ccc
Confidence            4332   233467999999999886 56899999999999999999999999754422211  110  00111100 000


Q ss_pred             ccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          708 PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       708 ~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                          .    .....+.+++.+||+.||++|||+.|++++
T Consensus       249 ----~----~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  279 (285)
T 3is5_A          249 ----R----PLTPQAVDLLKQMLTKDPERRPSAAQVLHH  279 (285)
T ss_dssp             ----C----CCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred             ----C----cCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                0    023467789999999999999999999974

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=2e-39  Score=351.65  Aligned_cols=266  Identities=23%  Similarity=0.288  Sum_probs=195.5

Q ss_pred             HHccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCc--cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeE
Q 003786          472 AATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG--QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKIL  548 (795)
Q Consensus       472 ~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  548 (795)
                      ...++|++.++||+|+||.||+|+.. +++.||||++.....  ...+.+.+|+++|++++||||+++++++.+.+..++
T Consensus        31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  110 (329)
T 3gbz_A           31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL  110 (329)
T ss_dssp             -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred             cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence            44578999999999999999999854 688999999965432  234567899999999999999999999999999999


Q ss_pred             EeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEEC-----CCCCeeeecccc
Q 003786          549 IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLD-----KDMNPKISDFGM  623 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~-----~~~~vkL~DFGl  623 (795)
                      ||||+++ +|.+++...   ..+++..+..++.||+.||.|||+++   |+||||||+|||++     .++.+||+|||+
T Consensus       111 v~e~~~~-~L~~~~~~~---~~~~~~~~~~i~~ql~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~  183 (329)
T 3gbz_A          111 IFEYAEN-DLKKYMDKN---PDVSMRVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGL  183 (329)
T ss_dssp             EEECCSE-EHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEC-----CCEEEECCTTH
T ss_pred             EEecCCC-CHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---EECCCCCHHHEEEecCCCCccceEEECcCCC
Confidence            9999985 888888433   34889999999999999999999998   99999999999994     455699999999


Q ss_pred             ccccCCCcccccccccccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhH-hhhccCc-
Q 003786          624 ARIFGGDELQSKTKRIVGTYGYMSPEYAQQG-LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHA-WDLWKDD-  700 (795)
Q Consensus       624 a~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~-~~~~~~~-  700 (795)
                      ++......  .......||+.|+|||++.+. .++.++|||||||++|||++|+.||.............. ....... 
T Consensus       184 a~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  261 (329)
T 3gbz_A          184 ARAFGIPI--RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTT  261 (329)
T ss_dssp             HHHHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTT
T ss_pred             ccccCCcc--cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhh
Confidence            98764332  123345789999999998774 589999999999999999999999976543221111100 0000000 


Q ss_pred             ------------ccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          701 ------------RAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       701 ------------~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                                  .........+...........+.+++.+||+.||++|||+.|++++
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  319 (329)
T 3gbz_A          262 WPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH  319 (329)
T ss_dssp             STTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             hhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence                        0000001111111122234677899999999999999999999985

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=3.4e-39  Score=338.93  Aligned_cols=253  Identities=23%  Similarity=0.343  Sum_probs=203.5

Q ss_pred             ccCCccccccCcCCcccEEEeEecCcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeec--ceeeEE
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL--EEKILI  549 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv  549 (795)
                      .++|++.+.||+|+||.||+|+. .++.||||++....  ....+.+.+|+.++++++||||+++++++.+.  ...++|
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   87 (271)
T 3kmu_A            9 FKQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI   87 (271)
T ss_dssp             GGGCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred             HHHhHHHHHhcCCCcceEEEEEE-CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence            46799999999999999999997 48899999997543  33456789999999999999999999999887  778999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      |||+++++|.+++.... ...+++..+..++.||++||.|||+.+ ..|+||||||+||+++.++.++|+|||++.....
T Consensus        88 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~  165 (271)
T 3kmu_A           88 THWMPYGSLYNVLHEGT-NFVVDQSQAVKFALDMARGMAFLHTLE-PLIPRHALNSRSVMIDEDMTARISMADVKFSFQS  165 (271)
T ss_dssp             EECCTTCBHHHHHHSCS-SCCCCHHHHHHHHHHHHHHHHHHTTSS-SCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC
T ss_pred             ecccCCCcHHHHHhhcc-cCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCccceEEEcCCcceeEEeccceeeecc
Confidence            99999999999996432 235899999999999999999999864 3499999999999999999999999998764322


Q ss_pred             CcccccccccccccccccccccccCCCC---cccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCccccccc
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQGLFS---IKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELI  706 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~~~~~---~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i  706 (795)
                             ....||+.|+|||.+.+..++   .++|||||||++|||++|+.||.........  ..   ......     
T Consensus       166 -------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~--~~---~~~~~~-----  228 (271)
T 3kmu_A          166 -------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIG--MK---VALEGL-----  228 (271)
T ss_dssp             -------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHH--HH---HHHSCC-----
T ss_pred             -------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHH--HH---HHhcCC-----
Confidence                   235689999999999876544   4899999999999999999998754322211  11   111110     


Q ss_pred             CccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          707 DPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       707 d~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                      .+    ..+...+..+.+++.+||+.||++|||++|+++.|+..
T Consensus       229 ~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l  268 (271)
T 3kmu_A          229 RP----TIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKM  268 (271)
T ss_dssp             CC----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CC----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence            01    11122345688999999999999999999999999764

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=3.8e-39  Score=349.68  Aligned_cols=265  Identities=25%  Similarity=0.334  Sum_probs=201.7

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCcc--chHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQ--GQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      .++|++.+.||+|+||.||+|+.. +++.||||++......  ..+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  103 (331)
T 4aaa_A           24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF  103 (331)
T ss_dssp             GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence            478999999999999999999875 4899999998654322  2456789999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      ||+++++|..++..   ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++......
T Consensus       104 e~~~~~~l~~~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  177 (331)
T 4aaa_A          104 EFVDHTILDDLELF---PNGLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAP  177 (331)
T ss_dssp             ECCSEEHHHHHHHS---TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred             ecCCcchHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHHCC---EEccCcChheEEEcCCCcEEEEeCCCceeecCC
Confidence            99999999887633   345889999999999999999999998   999999999999999999999999999865432


Q ss_pred             cccccccccccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhH---------hhh----
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQQG-LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHA---------WDL----  696 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~---------~~~----  696 (795)
                      .  .......||+.|+|||++.+. .++.++|||||||++|+|++|+.||..............         ...    
T Consensus       178 ~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (331)
T 4aaa_A          178 G--EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKN  255 (331)
T ss_dssp             --------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHC
T ss_pred             c--cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhc
Confidence            2  122345789999999998775 789999999999999999999999976543221110000         000    


Q ss_pred             --ccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          697 --WKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       697 --~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                        +......+..............+..+.+++.+||+.||++|||+.|++++
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h  307 (331)
T 4aaa_A          256 PVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH  307 (331)
T ss_dssp             GGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             cccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence              00011111111111111122345678899999999999999999999985

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=5.9e-39  Score=338.99  Aligned_cols=251  Identities=26%  Similarity=0.409  Sum_probs=184.9

Q ss_pred             HccCCccccccCcCCcccEEEeEe-cCcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeE
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKIL  548 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  548 (795)
                      ..++|++.+.||+|+||.||+|+. .+++.||||++....   ....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus         9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   88 (278)
T 3cok_A            9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL   88 (278)
T ss_dssp             SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred             ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence            346799999999999999999986 468999999996532   2334778999999999999999999999999999999


Q ss_pred             EeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccC
Q 003786          549 IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      ||||+++++|.+++...  ...+++..+..++.||++||.|||+.+   |+||||||+||+++.++.+||+|||++....
T Consensus        89 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~  163 (278)
T 3cok_A           89 VLEMCHNGEMNRYLKNR--VKPFSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLK  163 (278)
T ss_dssp             EEECCTTEEHHHHHHTC--SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSSCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEecCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEEeecceeecc
Confidence            99999999999998542  345889999999999999999999998   9999999999999999999999999998764


Q ss_pred             CCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCc
Q 003786          629 GDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP  708 (795)
Q Consensus       629 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~  708 (795)
                      ....  ......||+.|+|||.+.+..++.++||||||+++|+|++|+.|+.........  .   .. .   ..   +.
T Consensus       164 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~--~---~~-~---~~---~~  229 (278)
T 3cok_A          164 MPHE--KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL--N---KV-V---LA---DY  229 (278)
T ss_dssp             ------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------C-C---SS---CC
T ss_pred             CCCC--cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH--H---HH-h---hc---cc
Confidence            3221  223357899999999999989999999999999999999999998754422210  0   00 0   00   00


Q ss_pred             cccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          709 TLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       709 ~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                          ..+......+.+++.+||+.||++||++++++++
T Consensus       230 ----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  263 (278)
T 3cok_A          230 ----EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDH  263 (278)
T ss_dssp             ----CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             ----CCccccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence                0111234567889999999999999999999874

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=1.5e-39  Score=375.47  Aligned_cols=259  Identities=29%  Similarity=0.429  Sum_probs=210.4

Q ss_pred             HccCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      ..++|++.++||+|+||.||+|++..+..||||++.... ...+.|.+|+++|++++||||+++++++.+ +..++||||
T Consensus       265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~  342 (535)
T 2h8h_A          265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY  342 (535)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred             chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeeh
Confidence            457789999999999999999998878889999997543 446789999999999999999999999876 778999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      +++|+|.+++... ....+++..+..++.||+.||.|||+++   |+||||||+||||+.++.+||+|||+++.......
T Consensus       343 ~~~gsL~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  418 (535)
T 2h8h_A          343 MSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY  418 (535)
T ss_dssp             CTTEEHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHH
T ss_pred             hcCCcHHHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEEcCCCcEEEcccccceecCCCce
Confidence            9999999999532 2245889999999999999999999998   99999999999999999999999999987643221


Q ss_pred             cccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCcccc
Q 003786          633 QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQ  711 (795)
Q Consensus       633 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~  711 (795)
                       .......++..|+|||++....++.++|||||||+||||++ |+.||........  ....    ....         .
T Consensus       419 -~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~--~~~i----~~~~---------~  482 (535)
T 2h8h_A          419 -TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV--LDQV----ERGY---------R  482 (535)
T ss_dssp             -HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHH--HHHH----HTTC---------C
T ss_pred             -ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH--HHHH----HcCC---------C
Confidence             11223456789999999998999999999999999999999 8988865432211  1111    1110         0


Q ss_pred             chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccccCC
Q 003786          712 NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTIN  753 (795)
Q Consensus       712 ~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~~~  753 (795)
                      ...+..++..+.+|+.+||+.||++|||+++|+++|+.....
T Consensus       483 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~  524 (535)
T 2h8h_A          483 MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS  524 (535)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred             CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence            111223345788999999999999999999999999885443

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.2e-38  Score=348.04  Aligned_cols=268  Identities=24%  Similarity=0.297  Sum_probs=199.8

Q ss_pred             HHccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCcc-----chHHHHHHHHHHHhcCCcccceeeeeeeecce
Q 003786          472 AATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQ-----GQEEFKNEIKLIAKLQHRNLVRLLGCCIELEE  545 (795)
Q Consensus       472 ~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  545 (795)
                      ...++|++.+.||+|+||.||+|+.. +++.||||++......     ..+.+.+|++++++++||||+++++++.+.+.
T Consensus         7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (346)
T 1ua2_A            7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN   86 (346)
T ss_dssp             ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred             HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence            44578999999999999999999875 5899999998653221     23568899999999999999999999999999


Q ss_pred             eeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccc
Q 003786          546 KILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR  625 (795)
Q Consensus       546 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~  625 (795)
                      .++||||+++ +|..++..  ....+++..+..++.||++||.|||+.+   |+||||||+|||++.++.+||+|||+++
T Consensus        87 ~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~  160 (346)
T 1ua2_A           87 ISLVFDFMET-DLEVIIKD--NSLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAK  160 (346)
T ss_dssp             CEEEEECCSE-EHHHHHTT--CCSSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred             eEEEEEcCCC-CHHHHHHh--cCcCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCCHHHEEEcCCCCEEEEecccce
Confidence            9999999987 77777743  2345889999999999999999999998   9999999999999999999999999998


Q ss_pred             ccCCCccccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhcc---Ccc
Q 003786          626 IFGGDELQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWK---DDR  701 (795)
Q Consensus       626 ~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~---~~~  701 (795)
                      ......  .......||+.|+|||++.+ ..++.++|||||||++|||++|.+|+........  +........   ...
T Consensus       161 ~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~--~~~i~~~~~~~~~~~  236 (346)
T 1ua2_A          161 SFGSPN--RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQ--LTRIFETLGTPTEEQ  236 (346)
T ss_dssp             TTTSCC--CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCCCCTTT
T ss_pred             eccCCc--ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHH--HHHHHHHcCCCChhh
Confidence            764322  22334678999999999865 4589999999999999999999998876542221  111111100   000


Q ss_pred             cc------cccCccccc-----hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          702 AW------ELIDPTLQN-----EASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       702 ~~------~~id~~l~~-----~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      ..      +.+......     .........+.+++.+||+.||++|||+.|++++.-.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f  295 (346)
T 1ua2_A          237 WPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYF  295 (346)
T ss_dssp             SSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGG
T ss_pred             hhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhh
Confidence            00      000000000     1112234678899999999999999999999997543

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=1.2e-38  Score=339.33  Aligned_cols=254  Identities=26%  Similarity=0.376  Sum_probs=201.7

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecC
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYM  553 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  553 (795)
                      ++|.....||+|+||.||+|+.. +++.||||++........+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus        22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  101 (295)
T 2clq_A           22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV  101 (295)
T ss_dssp             CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence            34555668999999999999864 58899999997766666788999999999999999999999999999999999999


Q ss_pred             CCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECC-CCCeeeeccccccccCCCcc
Q 003786          554 PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDK-DMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       554 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~-~~~vkL~DFGla~~~~~~~~  632 (795)
                      ++++|.+++........+++..+..++.||++||.|||+.+   |+||||||+||+++. ++.+||+|||++....... 
T Consensus       102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~-  177 (295)
T 2clq_A          102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN-  177 (295)
T ss_dssp             SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred             CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC---EEccCCChhhEEEECCCCCEEEeecccccccCCCC-
Confidence            99999999976544445678889999999999999999998   999999999999987 8999999999998764322 


Q ss_pred             cccccccccccccccccccccC--CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccc
Q 003786          633 QSKTKRIVGTYGYMSPEYAQQG--LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL  710 (795)
Q Consensus       633 ~~~~~~~~gt~~y~APE~~~~~--~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l  710 (795)
                       .......|++.|+|||++.+.  .++.++||||||+++|+|++|+.||..............  ..       ...+. 
T Consensus       178 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~--~~-------~~~~~-  246 (295)
T 2clq_A          178 -PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVG--MF-------KVHPE-  246 (295)
T ss_dssp             ----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHH--HH-------CCCCC-
T ss_pred             -CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhc--cc-------ccccc-
Confidence             122345789999999998764  389999999999999999999999864332222111110  00       00111 


Q ss_pred             cchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       711 ~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                         .+......+.+++.+||+.||++||++.|++++
T Consensus       247 ---~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  279 (295)
T 2clq_A          247 ---IPESMSAEAKAFILKCFEPDPDKRACANDLLVD  279 (295)
T ss_dssp             ---CCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred             ---ccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence               112234567889999999999999999999975

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.5e-39  Score=342.55  Aligned_cols=256  Identities=26%  Similarity=0.401  Sum_probs=206.2

Q ss_pred             ccCCcccc-ccCcCCcccEEEeEec---CcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeE
Q 003786          474 TANFSTEN-KLGEGGFGPVYKGRLL---NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKIL  548 (795)
Q Consensus       474 ~~~~~~~~-~LG~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  548 (795)
                      .++|.+.+ .||+|+||.||+|.+.   +++.||||++.... ....+.+.+|++++++++||||+++++++ +.+..++
T Consensus         8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~l   86 (287)
T 1u59_A            8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALML   86 (287)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred             HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence            35666666 9999999999999753   57789999997643 33457789999999999999999999998 5667899


Q ss_pred             EeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccC
Q 003786          549 IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      ||||+++++|.+++..  ....+++..+..++.||++||.|||+.+   |+||||||+||+++.++.+||+|||++....
T Consensus        87 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~  161 (287)
T 1u59_A           87 VMEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALG  161 (287)
T ss_dssp             EEECCTTEEHHHHHTT--CTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred             EEEeCCCCCHHHHHHh--CCccCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCchheEEEcCCCCEEECcccceeeec
Confidence            9999999999999853  3345899999999999999999999998   9999999999999999999999999998765


Q ss_pred             CCccc-ccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCccccccc
Q 003786          629 GDELQ-SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELI  706 (795)
Q Consensus       629 ~~~~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i  706 (795)
                      ..... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||........  ....    .....    
T Consensus       162 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~--~~~i----~~~~~----  231 (287)
T 1u59_A          162 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV--MAFI----EQGKR----  231 (287)
T ss_dssp             TCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHH--HHHH----HTTCC----
T ss_pred             cCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHH--HHHH----hcCCc----
Confidence            33221 22233457899999999998899999999999999999998 9999875443221  1111    11110    


Q ss_pred             CccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          707 DPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       707 d~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                           ...+...+..+.+++.+||+.+|++||++.+++++|...
T Consensus       232 -----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~  270 (287)
T 1u59_A          232 -----MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC  270 (287)
T ss_dssp             -----CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -----CCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence                 111223345788999999999999999999999998774

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=3.7e-39  Score=365.86  Aligned_cols=267  Identities=21%  Similarity=0.243  Sum_probs=185.6

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeec-----ce
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL-----EE  545 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~  545 (795)
                      .++|++.++||+|+||.||+|++. +++.||||++....  ....+.+.+|+++|++++|||||++++++...     ..
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  131 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE  131 (458)
T ss_dssp             CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence            378999999999999999999865 68999999996532  23456788999999999999999999998543     56


Q ss_pred             eeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccc
Q 003786          546 KILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR  625 (795)
Q Consensus       546 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~  625 (795)
                      .++||||+. ++|..++.   ....+++..+..++.||+.||.|||+.+   |+||||||+||||+.++.+||+|||+++
T Consensus       132 ~~lv~e~~~-~~L~~~~~---~~~~l~~~~~~~~~~qi~~aL~~LH~~~---iiHrDlKp~NILl~~~~~~kl~DFGla~  204 (458)
T 3rp9_A          132 LYVVLEIAD-SDFKKLFR---TPVYLTELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLAR  204 (458)
T ss_dssp             EEEEECCCS-EEHHHHHH---SSCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred             EEEEEeccc-cchhhhcc---cCCCCCHHHHHHHHHHHHHHHHHHHhCC---cCCCCCChhhEEECCCCCEeecccccch
Confidence            899999985 68888874   3345899999999999999999999998   9999999999999999999999999998


Q ss_pred             ccCCCcc-------------------------ccccccccccccccccccc-ccCCCCcccchhhHHHHHHHHHh-----
Q 003786          626 IFGGDEL-------------------------QSKTKRIVGTYGYMSPEYA-QQGLFSIKSDVFSFGVLLLETLS-----  674 (795)
Q Consensus       626 ~~~~~~~-------------------------~~~~~~~~gt~~y~APE~~-~~~~~~~k~DvwSlGvil~ellt-----  674 (795)
                      .......                         .......+||+.|+|||++ ....|+.++|||||||+||||++     
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~  284 (458)
T 3rp9_A          205 TVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKEN  284 (458)
T ss_dssp             CTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTT
T ss_pred             hccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccc
Confidence            7642211                         0123345789999999976 56779999999999999999999     


Q ss_pred             ------CCCCCCCCCCcc------------------hhHhHhHhhhccCcc-----------ccc---ccCc---cccch
Q 003786          675 ------SKRNTDFSNTNS------------------LTLLGHAWDLWKDDR-----------AWE---LIDP---TLQNE  713 (795)
Q Consensus       675 ------G~~p~~~~~~~~------------------~~~~~~~~~~~~~~~-----------~~~---~id~---~l~~~  713 (795)
                            |+++|+......                  ...+...........           ...   .+..   .-...
T Consensus       285 ~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  364 (458)
T 3rp9_A          285 VAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAE  364 (458)
T ss_dssp             CSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGG
T ss_pred             ccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHH
Confidence                  555554432100                  000000000000000           000   0000   00001


Q ss_pred             hhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          714 ASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       714 ~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                      ........+.+|+.+||+.||++|||++|+++|-
T Consensus       365 ~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp  398 (458)
T 3rp9_A          365 RFPASSADAIHLLKRMLVFNPNKRITINECLAHP  398 (458)
T ss_dssp             GSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred             HCCCCCHHHHHHHHHHhccCccccCCHHHHhcCH
Confidence            1122345788999999999999999999999974

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=8.6e-39  Score=338.50  Aligned_cols=252  Identities=23%  Similarity=0.306  Sum_probs=203.1

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCc------cchHHHHHHHHHHHhcCCcccceeeeeeeeccee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG------QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEK  546 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  546 (795)
                      .++|++.+.||+|+||.||+++.. +++.||+|++.....      ...+.+.+|+.++++++||||+++++++.+....
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   83 (283)
T 3bhy_A            4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV   83 (283)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence            357999999999999999999876 589999999865421      2367899999999999999999999999999999


Q ss_pred             eEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCC----Ceeeeccc
Q 003786          547 ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDM----NPKISDFG  622 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~----~vkL~DFG  622 (795)
                      ++||||+++++|.+++..   ...+++..+..++.||+.||.|||+.+   |+||||||+||+++.++    .+||+|||
T Consensus        84 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~~~~kl~dfg  157 (283)
T 3bhy_A           84 VLILELVSGGELFDFLAE---KESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFG  157 (283)
T ss_dssp             EEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred             EEEEeecCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChHHEEEecCCCCCCceEEEecc
Confidence            999999999999999853   345889999999999999999999998   99999999999998877    89999999


Q ss_pred             cccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCccc
Q 003786          623 MARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRA  702 (795)
Q Consensus       623 la~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~  702 (795)
                      ++.......   ......|++.|+|||++.+..++.++||||||+++|+|++|..||........  ....    ...  
T Consensus       158 ~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~~----~~~--  226 (283)
T 3bhy_A          158 IAHKIEAGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQET--LTNI----SAV--  226 (283)
T ss_dssp             TCEECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH--HHHH----HTT--
T ss_pred             cceeccCCC---cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHH--HHHh----Hhc--
Confidence            998764332   22345689999999999999999999999999999999999999875432211  1110    000  


Q ss_pred             ccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          703 WELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       703 ~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                          ............+..+.+++.+||+.||++||++.|++++
T Consensus       227 ----~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  266 (283)
T 3bhy_A          227 ----NYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEH  266 (283)
T ss_dssp             ----CCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred             ----ccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence                0011111122234567899999999999999999999984

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=2e-38  Score=352.91  Aligned_cols=252  Identities=18%  Similarity=0.214  Sum_probs=192.8

Q ss_pred             ccCCccc-cccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHH-hcCCcccceeeeeeee----ccee
Q 003786          474 TANFSTE-NKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIA-KLQHRNLVRLLGCCIE----LEEK  546 (795)
Q Consensus       474 ~~~~~~~-~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~-~l~h~niv~l~~~~~~----~~~~  546 (795)
                      .++|.+. +.||+|+||.||++++. +++.||||++..     ...+.+|++++. ..+||||+++++++..    ....
T Consensus        60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~  134 (400)
T 1nxk_A           60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL  134 (400)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence            3567766 68999999999999865 588999999853     356788999875 4589999999999876    6678


Q ss_pred             eEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECC---CCCeeeecccc
Q 003786          547 ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDK---DMNPKISDFGM  623 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~---~~~vkL~DFGl  623 (795)
                      ++||||+++|+|.+++... ....+++..+..++.||+.||.|||+.+   |+||||||+|||++.   ++.+||+|||+
T Consensus       135 ~lv~E~~~gg~L~~~l~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~~~kl~DFG~  210 (400)
T 1nxk_A          135 LIVMECLDGGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGF  210 (400)
T ss_dssp             EEEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSTTCCEEECCCTT
T ss_pred             EEEEEeCCCCcHHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCcceEEEecCCCCccEEEEeccc
Confidence            9999999999999998543 2345899999999999999999999988   999999999999997   78999999999


Q ss_pred             ccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchh--HhHhHhhhccCcc
Q 003786          624 ARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLT--LLGHAWDLWKDDR  701 (795)
Q Consensus       624 a~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~--~~~~~~~~~~~~~  701 (795)
                      ++......   .....+||+.|+|||++.+..++.++|||||||++|||++|+.||.........  ......    ...
T Consensus       211 a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~----~~~  283 (400)
T 1nxk_A          211 AKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR----MGQ  283 (400)
T ss_dssp             CEECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHH----HTC
T ss_pred             ccccCCCC---ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHH----cCc
Confidence            98654322   234467899999999999999999999999999999999999999765432211  111000    000


Q ss_pred             cccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          702 AWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       702 ~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                      . ..     ...........+.++|.+||+.||++|||+.|++++.
T Consensus       284 ~-~~-----~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp  323 (400)
T 1nxk_A          284 Y-EF-----PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP  323 (400)
T ss_dssp             C-CC-----CTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred             c-cC-----CCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence            0 00     0001112345678999999999999999999999963

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=8.5e-39  Score=343.52  Aligned_cols=261  Identities=20%  Similarity=0.212  Sum_probs=199.5

Q ss_pred             HccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCcc---chHHHHHHHHHHHhcCCcccceeeeeeeecceeeE
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQ---GQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKIL  548 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  548 (795)
                      ..++|++.+.||+|+||.||+|+.. +++.||||++......   ..+.+.+|+.++++++||||+++++++.+.+..++
T Consensus        32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l  111 (309)
T 2h34_A           32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV  111 (309)
T ss_dssp             --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred             EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence            3578999999999999999999865 6889999999754322   24678899999999999999999999999999999


Q ss_pred             EeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccC
Q 003786          549 IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      ||||+++++|.+++...   ..+++..+..++.||+.||.|||+.+   |+||||||+||+++.++.+||+|||++....
T Consensus       112 v~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~  185 (309)
T 2h34_A          112 DMRLINGVDLAAMLRRQ---GPLAPPRAVAIVRQIGSALDAAHAAG---ATHRDVKPENILVSADDFAYLVDFGIASATT  185 (309)
T ss_dssp             EEECCCCEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred             EEEecCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCc---CCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence            99999999999998542   45889999999999999999999998   9999999999999999999999999998654


Q ss_pred             CCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCc
Q 003786          629 GDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP  708 (795)
Q Consensus       629 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~  708 (795)
                      .... .......|++.|+|||++.+..++.++||||||+++|||++|+.||........  ....   .......     
T Consensus       186 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~---~~~~~~~-----  254 (309)
T 2h34_A          186 DEKL-TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVM--GAHI---NQAIPRP-----  254 (309)
T ss_dssp             ------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHH--HHHH---HSCCCCG-----
T ss_pred             cccc-ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHH--HHHh---ccCCCCc-----
Confidence            3321 122345789999999999999999999999999999999999999875432211  1100   0000000     


Q ss_pred             cccchhhHHHHHHHHHHHHhhccCCCCCCC-CHHHHHHHHccccCC
Q 003786          709 TLQNEASYLILNRYINVGLLCVQEDAADRP-TMFEVVSMLTNKTIN  753 (795)
Q Consensus       709 ~l~~~~~~~~~~~l~~li~~cL~~dP~~RP-t~~evl~~L~~~~~~  753 (795)
                         .......+..+.+++.+||+.||++|| +++++++.|+.....
T Consensus       255 ---~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~  297 (309)
T 2h34_A          255 ---STVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALAT  297 (309)
T ss_dssp             ---GGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-
T ss_pred             ---cccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHh
Confidence               011222344678899999999999999 999999999874443

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=9.8e-39  Score=342.96  Aligned_cols=266  Identities=25%  Similarity=0.370  Sum_probs=200.5

Q ss_pred             ccCCccccccCcCCcccEEEeEe-cCcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          474 TANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      ..+|++.+.||+|+||.||+|+. .+++.||||++....   ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv  110 (310)
T 2wqm_A           31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV  110 (310)
T ss_dssp             GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence            46799999999999999999986 468999999997532   23456788999999999999999999999999999999


Q ss_pred             eecCCCCChhhhhhccC-CcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccC
Q 003786          550 YEYMPNKSLDFFLFDST-KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      |||+++++|.+++.... ....+++..+..++.||+.||.|||+.+   |+||||||+||+++.++.+||+|||++....
T Consensus       111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~  187 (310)
T 2wqm_A          111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFS  187 (310)
T ss_dssp             EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred             EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence            99999999999885422 2455889999999999999999999998   9999999999999999999999999998654


Q ss_pred             CCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCc
Q 003786          629 GDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP  708 (795)
Q Consensus       629 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~  708 (795)
                      ...  .......|++.|+|||++.+..++.++||||||+++|+|++|+.||..............    ........   
T Consensus       188 ~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~----~~~~~~~~---  258 (310)
T 2wqm_A          188 SKT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKI----EQCDYPPL---  258 (310)
T ss_dssp             -------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHH----HTTCSCCC---
T ss_pred             CCC--ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHh----hcccCCCC---
Confidence            322  122345789999999999999999999999999999999999999865433322222111    11111100   


Q ss_pred             cccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccccCCCCC
Q 003786          709 TLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPH  756 (795)
Q Consensus       709 ~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~~~l~~  756 (795)
                           ........+.+++.+||+.||++||++.+|+++|+......+.
T Consensus       259 -----~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~  301 (310)
T 2wqm_A          259 -----PSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS  301 (310)
T ss_dssp             -----CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred             -----cccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhh
Confidence                 0112345678999999999999999999999999875444333

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=3.9e-39  Score=348.93  Aligned_cols=259  Identities=29%  Similarity=0.402  Sum_probs=203.3

Q ss_pred             ccCCccccccCcCCcccEEEeEe------cCcceEEEEEeccc-CccchHHHHHHHHHHHhcCCcccceeeeeeeeccee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRL------LNGQEVAVKRLSSQ-SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEK  546 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  546 (795)
                      .++|++.+.||+|+||.||+|+.      .+++.||||++... ......++.+|+.++++++||||+++++++.+....
T Consensus        29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  108 (327)
T 2yfx_A           29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  108 (327)
T ss_dssp             GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence            47899999999999999999983      24778999999654 234456789999999999999999999999999999


Q ss_pred             eEEeecCCCCChhhhhhccCC----cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCC---CCeeee
Q 003786          547 ILIYEYMPNKSLDFFLFDSTK----ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKD---MNPKIS  619 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~---~~vkL~  619 (795)
                      ++||||+++++|.+++.....    ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.+   ..+||+
T Consensus       109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---i~H~dlkp~NIli~~~~~~~~~kl~  185 (327)
T 2yfx_A          109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIG  185 (327)
T ss_dssp             EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred             EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eecCcCCHhHEEEecCCCcceEEEC
Confidence            999999999999999965432    245888899999999999999999998   9999999999999844   469999


Q ss_pred             ccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhcc
Q 003786          620 DFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWK  698 (795)
Q Consensus       620 DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~  698 (795)
                      |||++................||+.|+|||++.+..++.++|||||||++|+|++ |..|+........  ....    .
T Consensus       186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~--~~~~----~  259 (327)
T 2yfx_A          186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV--LEFV----T  259 (327)
T ss_dssp             CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH--HHHH----H
T ss_pred             ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHH--HHHH----h
Confidence            9999986543333233344568999999999998999999999999999999998 8888865432211  1111    1


Q ss_pred             CcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          699 DDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       699 ~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                      .....         ..+...+..+.+++.+||+.||++||++.+|+++|...
T Consensus       260 ~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~  302 (327)
T 2yfx_A          260 SGGRM---------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  302 (327)
T ss_dssp             TTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cCCCC---------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            11100         01112345678899999999999999999999998763

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=1.1e-38  Score=341.67  Aligned_cols=251  Identities=22%  Similarity=0.295  Sum_probs=202.9

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      .++|++.+.||+|+||.||+++.. +++.||||++........+.+.+|+.++++++||||+++++++.+....++||||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL   87 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence            467999999999999999999875 6899999999766555567799999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEE---CCCCCeeeeccccccccCC
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILL---DKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll---~~~~~vkL~DFGla~~~~~  629 (795)
                      +++++|.+++..   .+.+++..+..++.||+.||.|||+.+   |+||||||+||++   +.++.+||+|||++.....
T Consensus        88 ~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~  161 (304)
T 2jam_A           88 VSGGELFDRILE---RGVYTEKDASLVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN  161 (304)
T ss_dssp             CCSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC
T ss_pred             CCCccHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEecCCCCCCEEEccCCcceecCC
Confidence            999999888843   345889999999999999999999998   9999999999999   7889999999999976432


Q ss_pred             CcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcc
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT  709 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~  709 (795)
                      .    ......||+.|+|||++.+..++.++|||||||++|+|++|..||.......  .......    ... .     
T Consensus       162 ~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~i~~----~~~-~-----  225 (304)
T 2jam_A          162 G----IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESK--LFEKIKE----GYY-E-----  225 (304)
T ss_dssp             B----TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHH----CCC-C-----
T ss_pred             C----ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH--HHHHHHc----CCC-C-----
Confidence            2    2233568999999999999999999999999999999999999986543221  1111100    000 0     


Q ss_pred             ccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          710 LQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       710 l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .........+..+.+++.+||+.||++||++.|++++
T Consensus       226 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  262 (304)
T 2jam_A          226 FESPFWDDISESAKDFICHLLEKDPNERYTCEKALSH  262 (304)
T ss_dssp             CCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             CCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            0011112234578899999999999999999999985

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=5.3e-39  Score=342.64  Aligned_cols=261  Identities=27%  Similarity=0.327  Sum_probs=204.1

Q ss_pred             cCCccccccCcCCcccEEEeEecC----cceEEEEEecccCc-cchHHHHHHHHHHHhcCCcccceeeeeeeeccee-eE
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLN----GQEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEK-IL  548 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-~l  548 (795)
                      ..|...++||+|+||.||+|++.+    +..+|+|++..... ...+.+.+|+.++++++||||+++++++.+.+.. ++
T Consensus        21 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  100 (298)
T 3pls_A           21 VVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHV  100 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred             eEEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEE
Confidence            356777999999999999998533    23699999875432 3457789999999999999999999999877665 89


Q ss_pred             EeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccC
Q 003786          549 IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      ||||+.+++|.+++..  ....+++..+..++.||++||.|||+.+   |+||||||+||+++.++.+||+|||+++...
T Consensus       101 v~e~~~~~~L~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~  175 (298)
T 3pls_A          101 LLPYMCHGDLLQFIRS--PQRNPTVKDLISFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDIL  175 (298)
T ss_dssp             EECCCTTCBHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECCTTSSCTTT
T ss_pred             EEecccCCCHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEeCcCCCccccc
Confidence            9999999999999854  2345788999999999999999999998   9999999999999999999999999998654


Q ss_pred             CCcc--cccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCccccccc
Q 003786          629 GDEL--QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELI  706 (795)
Q Consensus       629 ~~~~--~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i  706 (795)
                      ....  ........+++.|+|||.+.+..++.++|||||||++|+|++|..|+........ ......    ....    
T Consensus       176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~-~~~~~~----~~~~----  246 (298)
T 3pls_A          176 DREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFD-LTHFLA----QGRR----  246 (298)
T ss_dssp             TGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGG-HHHHHH----TTCC----
T ss_pred             CCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHH-HHHHhh----cCCC----
Confidence            3321  1223345688999999999999999999999999999999996666433222111 111110    0000    


Q ss_pred             CccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccccCCC
Q 003786          707 DPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINL  754 (795)
Q Consensus       707 d~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~~~l  754 (795)
                           ...+...+..+.+++.+||+.+|++|||+++++++|+.....+
T Consensus       247 -----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l  289 (298)
T 3pls_A          247 -----LPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSAL  289 (298)
T ss_dssp             -----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             -----CCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHH
Confidence                 0011122356789999999999999999999999998754443

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.8e-38  Score=342.20  Aligned_cols=268  Identities=24%  Similarity=0.336  Sum_probs=200.7

Q ss_pred             HHHccCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhc--CCcccceeeeeeeec----c
Q 003786          471 SAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKL--QHRNLVRLLGCCIEL----E  544 (795)
Q Consensus       471 ~~~~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~----~  544 (795)
                      ....++|++.++||+|+||.||+|+.. ++.||||++...   ....+..|.+++..+  +||||+++++++...    .
T Consensus        33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~  108 (337)
T 3mdy_A           33 RTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWT  108 (337)
T ss_dssp             TTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGC
T ss_pred             cccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCC
Confidence            344578999999999999999999874 899999998543   334555666666554  899999999999887    6


Q ss_pred             eeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcC-----CCcEEeccCCCCcEEECCCCCeeee
Q 003786          545 EKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS-----RLRVIHRDLKASNILLDKDMNPKIS  619 (795)
Q Consensus       545 ~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-----~~~iiHrDikp~NIll~~~~~vkL~  619 (795)
                      ..++||||+++++|.+++..    ..+++..+..++.|++.||.|||++.     ..+|+||||||+|||++.++.+||+
T Consensus       109 ~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~  184 (337)
T 3mdy_A          109 QLYLITDYHENGSLYDYLKS----TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIA  184 (337)
T ss_dssp             EEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEEC
T ss_pred             ceEEEEeccCCCcHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEE
Confidence            78999999999999999843    24889999999999999999999880     1129999999999999999999999


Q ss_pred             ccccccccCCCccc--ccccccccccccccccccccCCCCcc------cchhhHHHHHHHHHhC----------CCCCCC
Q 003786          620 DFGMARIFGGDELQ--SKTKRIVGTYGYMSPEYAQQGLFSIK------SDVFSFGVLLLETLSS----------KRNTDF  681 (795)
Q Consensus       620 DFGla~~~~~~~~~--~~~~~~~gt~~y~APE~~~~~~~~~k------~DvwSlGvil~elltG----------~~p~~~  681 (795)
                      |||++.........  .......||+.|+|||++.+..++.+      +|||||||++|||++|          ..|+..
T Consensus       185 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~  264 (337)
T 3mdy_A          185 DLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHD  264 (337)
T ss_dssp             CCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred             eCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhh
Confidence            99999865433221  11234579999999999987766655      9999999999999999          445443


Q ss_pred             CCCcchhHhHhHhhhccCcccccccCccccc-hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcccc
Q 003786          682 SNTNSLTLLGHAWDLWKDDRAWELIDPTLQN-EASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKT  751 (795)
Q Consensus       682 ~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~-~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~  751 (795)
                      ............ ....    .....+.+.. .....+...+.+++.+||+.||++|||+.||+++|+...
T Consensus       265 ~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~  330 (337)
T 3mdy_A          265 LVPSDPSYEDMR-EIVC----IKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMS  330 (337)
T ss_dssp             TSCSSCCHHHHH-HHHT----TSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hcCCCCchhhhH-HHHh----hhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHH
Confidence            221111111110 0000    0111111111 123356778999999999999999999999999997743

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=3.1e-39  Score=350.54  Aligned_cols=265  Identities=22%  Similarity=0.258  Sum_probs=192.3

Q ss_pred             HHccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcC-Ccccceeeeeee--------
Q 003786          472 AATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQ-HRNLVRLLGCCI--------  541 (795)
Q Consensus       472 ~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~--------  541 (795)
                      ....+|++.++||+|+||.||+|++. +++.||||++........+.+.+|+.+++++. ||||+++++++.        
T Consensus        25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~  104 (337)
T 3ll6_A           25 LGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDT  104 (337)
T ss_dssp             ETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTT
T ss_pred             ccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhcccccccccccccc
Confidence            34468999999999999999999864 68999999997666566678999999999996 999999999984        


Q ss_pred             ecceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecc
Q 003786          542 ELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDF  621 (795)
Q Consensus       542 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DF  621 (795)
                      .....++||||+. |+|.+++........+++..+..++.||+.||.|||+++ .+|+||||||+|||++.++.+||+||
T Consensus       105 ~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-~~ivH~Dikp~NIl~~~~~~~kl~Df  182 (337)
T 3ll6_A          105 GQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLSNQGTIKLCDF  182 (337)
T ss_dssp             SSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred             CCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCEEEccCCcccEEECCCCCEEEecC
Confidence            3445789999996 688888865445566999999999999999999999874 34999999999999999999999999


Q ss_pred             ccccccCCCccc----------cccccccccccccccccc---ccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchh
Q 003786          622 GMARIFGGDELQ----------SKTKRIVGTYGYMSPEYA---QQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLT  688 (795)
Q Consensus       622 Gla~~~~~~~~~----------~~~~~~~gt~~y~APE~~---~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~  688 (795)
                      |++.........          .......||+.|+|||++   .+..++.++|||||||++|+|++|+.||........ 
T Consensus       183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~-  261 (337)
T 3ll6_A          183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRI-  261 (337)
T ss_dssp             TTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------
T ss_pred             ccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHh-
Confidence            999876432211          111235689999999998   567789999999999999999999999864322111 


Q ss_pred             HhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccccCCCCC
Q 003786          689 LLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPH  756 (795)
Q Consensus       689 ~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~~~l~~  756 (795)
                       ..       .         .............+.+++.+||+.||++||++.|++++|.......+.
T Consensus       262 -~~-------~---------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~~  312 (337)
T 3ll6_A          262 -VN-------G---------KYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNV  312 (337)
T ss_dssp             ---------------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTTC
T ss_pred             -hc-------C---------cccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccCC
Confidence             00       0         000000111123467899999999999999999999999775444333

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=2.2e-38  Score=362.18  Aligned_cols=252  Identities=26%  Similarity=0.329  Sum_probs=203.4

Q ss_pred             HccCCccccccCcCCcccEEEeEec-CcceEEEEEeccc--CccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQ--SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      ..++|++.++||+|+||.||+|+.. +++.||||++.+.  .......+.+|+++|++++||||+++++++.+....++|
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv   99 (486)
T 3mwu_A           20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV   99 (486)
T ss_dssp             HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence            3467999999999999999999875 6899999998653  234567899999999999999999999999999999999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEEC---CCCCeeeeccccccc
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLD---KDMNPKISDFGMARI  626 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~---~~~~vkL~DFGla~~  626 (795)
                      |||+++++|.+.+...   ..+++..+..++.||+.||.|||+++   |+||||||+|||++   .++.+||+|||+++.
T Consensus       100 ~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~  173 (486)
T 3mwu_A          100 GELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTC  173 (486)
T ss_dssp             ECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEESSSSTTCCEEECSCSCTTT
T ss_pred             EEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEEECCcCeE
Confidence            9999999998888443   45899999999999999999999998   99999999999995   556799999999987


Q ss_pred             cCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCccccccc
Q 003786          627 FGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELI  706 (795)
Q Consensus       627 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i  706 (795)
                      .....   ......||+.|+|||++.+ .++.++|||||||++|+|++|..||........  ......    ....   
T Consensus       174 ~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--~~~i~~----~~~~---  240 (486)
T 3mwu_A          174 FQQNT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDI--LKRVET----GKYA---  240 (486)
T ss_dssp             BCCC-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHH----TCCC---
T ss_pred             CCCCC---ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHh----CCCC---
Confidence            64332   2334579999999999876 599999999999999999999999975432221  111100    0000   


Q ss_pred             CccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          707 DPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       707 d~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                         .........+..+.+++.+||+.+|++|||+.|++++
T Consensus       241 ---~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h  277 (486)
T 3mwu_A          241 ---FDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH  277 (486)
T ss_dssp             ---SCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred             ---CCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence               0011112234567899999999999999999999996

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=2.3e-38  Score=374.35  Aligned_cols=267  Identities=23%  Similarity=0.296  Sum_probs=214.2

Q ss_pred             HccCCccccccCcCCcccEEEeEec-CcceEEEEEeccc---CccchHHHHHHHHHHHhc-CCcccceeeeeeeecceee
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQ---SGQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEEKI  547 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~  547 (795)
                      ..++|++.+.||+|+||.||+|+.. +++.||||++.+.   .....+.+..|..+|..+ +||+|+++++++.+.+..+
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~  418 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY  418 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence            4578999999999999999999865 5888999999753   234556788999999987 7999999999999999999


Q ss_pred             EEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccccc
Q 003786          548 LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF  627 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~  627 (795)
                      +||||+++|+|..++...   ..+++..+..++.||+.||.|||+++   |+||||||+||||+.++.+||+|||+++..
T Consensus       419 lV~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~g---IiHrDLKp~NILl~~~g~ikL~DFGla~~~  492 (674)
T 3pfq_A          419 FVMEYVNGGDLMYHIQQV---GRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEN  492 (674)
T ss_dssp             EEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTS---EECCCCCSTTEEECSSSCEEECCCTTCEEC
T ss_pred             EEEeCcCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeccCChhhEEEcCCCcEEEeecceeecc
Confidence            999999999999998543   45899999999999999999999998   999999999999999999999999999864


Q ss_pred             CCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccC
Q 003786          628 GGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID  707 (795)
Q Consensus       628 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id  707 (795)
                      ....  ......+||+.|+|||++.+..|+.++|||||||+||||++|+.||...+....  ....   .. ...     
T Consensus       493 ~~~~--~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~--~~~i---~~-~~~-----  559 (674)
T 3pfq_A          493 IWDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL--FQSI---ME-HNV-----  559 (674)
T ss_dssp             CCTT--CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHH---HS-SCC-----
T ss_pred             ccCC--cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHH--HHHH---Hh-CCC-----
Confidence            3222  234457899999999999999999999999999999999999999976442221  1111   11 100     


Q ss_pred             ccccchhhHHHHHHHHHHHHhhccCCCCCCCCH-----HHHHHHHcc--------ccCCCCCCCCCCcc
Q 003786          708 PTLQNEASYLILNRYINVGLLCVQEDAADRPTM-----FEVVSMLTN--------KTINLPHPRQPAFS  763 (795)
Q Consensus       708 ~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~-----~evl~~L~~--------~~~~l~~p~~p~~~  763 (795)
                           ..+......+.+||.+||+.||++||++     +||+++-=.        ....+++|..|...
T Consensus       560 -----~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i~w~~l~~~~~~pp~~p~~~  623 (674)
T 3pfq_A          560 -----AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPKAS  623 (674)
T ss_dssp             -----CCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSCCHHHHTTTCSCCSCCCBCC
T ss_pred             -----CCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccCCCHHHHHhCCCCCCCCCcCC
Confidence                 0112234577899999999999999998     888875311        12345666666543

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=2.3e-38  Score=335.16  Aligned_cols=249  Identities=27%  Similarity=0.408  Sum_probs=203.4

Q ss_pred             HccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeee---------
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIE---------  542 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~---------  542 (795)
                      ...+|++.+.||+|+||.||+|+.. +++.||||++....    +.+.+|++++++++||||+++++++..         
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   84 (284)
T 2a19_B            9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS   84 (284)
T ss_dssp             HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred             hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence            3467999999999999999999875 68999999996542    467899999999999999999998864         


Q ss_pred             -------cceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCC
Q 003786          543 -------LEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMN  615 (795)
Q Consensus       543 -------~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~  615 (795)
                             ....++||||+++++|.+++... ....+++..+..++.||+.||.|||+++   |+||||||+||+++.++.
T Consensus        85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~  160 (284)
T 2a19_B           85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKR-RGEKLDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQ  160 (284)
T ss_dssp             ----CCEEEEEEEEECCCCSCBHHHHHHHG-GGSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTE
T ss_pred             ccccccCcceEEEEEeccCCCCHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHEEEcCCCC
Confidence                   45578999999999999998543 2346889999999999999999999998   999999999999999999


Q ss_pred             eeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhh
Q 003786          616 PKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWD  695 (795)
Q Consensus       616 vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~  695 (795)
                      +||+|||++.......   ......||+.|+|||++.+..++.++||||||+++|+|++|..|+...    ..    ...
T Consensus       161 ~kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----~~----~~~  229 (284)
T 2a19_B          161 VKIGDFGLVTSLKNDG---KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET----SK----FFT  229 (284)
T ss_dssp             EEECCCTTCEESSCCS---CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH----HH----HHH
T ss_pred             EEECcchhheeccccc---cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH----HH----HHH
Confidence            9999999998765432   223356899999999999999999999999999999999998775311    00    001


Q ss_pred             hccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccccC
Q 003786          696 LWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTI  752 (795)
Q Consensus       696 ~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~~  752 (795)
                      ......        +.    ...+..+.+++.+||+.||++||++.|++++|.....
T Consensus       230 ~~~~~~--------~~----~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~  274 (284)
T 2a19_B          230 DLRDGI--------IS----DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKK  274 (284)
T ss_dssp             HHHTTC--------CC----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC
T ss_pred             Hhhccc--------cc----ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhh
Confidence            111111        11    1123457789999999999999999999999987443

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=9.2e-39  Score=338.12  Aligned_cols=255  Identities=29%  Similarity=0.401  Sum_probs=201.9

Q ss_pred             HccCCccccccCcCCcccEEEeEecC----cceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceee
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLLN----GQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKI  547 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  547 (795)
                      ..++|++.+.||+|+||.||+|+...    +..||||++.... ....+.+.+|+.++++++||||+++++++.+ +..+
T Consensus        10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~   88 (281)
T 3cc6_A           10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW   88 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred             cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence            45789999999999999999998543    3469999997653 3345789999999999999999999999764 4578


Q ss_pred             EEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccccc
Q 003786          548 LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF  627 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~  627 (795)
                      +||||+++++|.+++...  ...+++..+..++.||++||.|||+++   |+||||||+||+++.++.+||+|||++...
T Consensus        89 ~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  163 (281)
T 3cc6_A           89 IIMELYPYGELGHYLERN--KNSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRYI  163 (281)
T ss_dssp             EEEECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEEETTEEEECCCCGGGCC
T ss_pred             EEEecCCCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEECCCCcEEeCccCCCccc
Confidence            999999999999998542  245889999999999999999999998   999999999999999999999999999876


Q ss_pred             CCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCccccccc
Q 003786          628 GGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELI  706 (795)
Q Consensus       628 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i  706 (795)
                      ...... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||.........  .....   ....    
T Consensus       164 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~--~~~~~---~~~~----  233 (281)
T 3cc6_A          164 EDEDYY-KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI--GVLEK---GDRL----  233 (281)
T ss_dssp             ----------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHH--HHHHH---TCCC----
T ss_pred             cccccc-ccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHH--HHHhc---CCCC----
Confidence            543221 2233457889999999998999999999999999999998 99998654432221  11100   0000    


Q ss_pred             CccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          707 DPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       707 d~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                            ..+...+..+.+++.+||+.+|++||++.|++++|+.
T Consensus       234 ------~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~  270 (281)
T 3cc6_A          234 ------PKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSD  270 (281)
T ss_dssp             ------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ------CCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHH
Confidence                  0111233567899999999999999999999999876

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=3.4e-38  Score=335.92  Aligned_cols=262  Identities=19%  Similarity=0.229  Sum_probs=201.6

Q ss_pred             HccCCccccccCcCCcccEEEeEe-cCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeee-eecceeeEEe
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCC-IELEEKILIY  550 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lv~  550 (795)
                      ..++|++.+.||+|+||.||+|+. .+++.||||++....  ..+.+.+|+++++.++|++++..+..+ .+.+..++||
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence            357899999999999999999986 468899999875432  334688999999999988877766655 5667789999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEE---CCCCCeeeecccccccc
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILL---DKDMNPKISDFGMARIF  627 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll---~~~~~vkL~DFGla~~~  627 (795)
                      ||+ +++|.+++...  ...+++..+..++.||+.||.|||+++   |+||||||+|||+   +.++.+||+|||+++..
T Consensus        85 e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~  158 (296)
T 4hgt_A           85 ELL-GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY  158 (296)
T ss_dssp             ECC-CCBHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred             Ecc-CCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeeeeccCCCCeEEEecCccceec
Confidence            999 99999988532  235899999999999999999999998   9999999999999   78999999999999876


Q ss_pred             CCCccc-----ccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcch-hHhHhHhhhccCcc
Q 003786          628 GGDELQ-----SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSL-TLLGHAWDLWKDDR  701 (795)
Q Consensus       628 ~~~~~~-----~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~-~~~~~~~~~~~~~~  701 (795)
                      ......     .......||+.|+|||.+.+..++.++|||||||++|+|++|+.||........ ..............
T Consensus       159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  238 (296)
T 4hgt_A          159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP  238 (296)
T ss_dssp             BCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC
T ss_pred             cCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccch
Confidence            543221     122346799999999999999999999999999999999999999976442221 11111100000000


Q ss_pred             cccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcccc
Q 003786          702 AWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKT  751 (795)
Q Consensus       702 ~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~  751 (795)
                               ........+..+.+++.+||+.+|++||++++|++.|+...
T Consensus       239 ---------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~  279 (296)
T 4hgt_A          239 ---------IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF  279 (296)
T ss_dssp             ---------HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred             ---------hhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHH
Confidence                     00011122457889999999999999999999999987743

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=1.1e-38  Score=340.51  Aligned_cols=260  Identities=28%  Similarity=0.388  Sum_probs=201.6

Q ss_pred             HccCCccccccCcCCcccEEEeEecC----cceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeee-eccee
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLLN----GQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCI-ELEEK  546 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~  546 (795)
                      ...+|++.++||+|+||.||+|+...    ...+|+|.+.... ....+.+.+|+.++++++||||+++++++. .....
T Consensus        23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  102 (298)
T 3f66_A           23 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP  102 (298)
T ss_dssp             GGEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCC
T ss_pred             cceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCce
Confidence            34678999999999999999998543    2358999987543 234567899999999999999999999854 45678


Q ss_pred             eEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          547 ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                      ++||||+++++|.+++..  ....+++..+..++.||++||.|||+++   |+||||||+||+++.++.+||+|||+++.
T Consensus       103 ~~v~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~ql~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~a~~  177 (298)
T 3f66_A          103 LVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARD  177 (298)
T ss_dssp             EEEEECCTTCBHHHHHHC--TTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSCGGGCC
T ss_pred             EEEEeCCCCCCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEECCCCCEEECccccccc
Confidence            999999999999999954  2345788999999999999999999998   99999999999999999999999999987


Q ss_pred             cCCCccc--ccccccccccccccccccccCCCCcccchhhHHHHHHHHHhC-CCCCCCCCCcchhHhHhHhhhccCcccc
Q 003786          627 FGGDELQ--SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSS-KRNTDFSNTNSLTLLGHAWDLWKDDRAW  703 (795)
Q Consensus       627 ~~~~~~~--~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG-~~p~~~~~~~~~~~~~~~~~~~~~~~~~  703 (795)
                      .......  .......+|+.|+|||.+.+..++.++||||||+++|+|++| .+|+..........  ...    .... 
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~--~~~----~~~~-  250 (298)
T 3f66_A          178 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV--YLL----QGRR-  250 (298)
T ss_dssp             CSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHH--HHH----TTCC-
T ss_pred             ccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHH--HHh----cCCC-
Confidence            6443221  122335678899999999999999999999999999999995 45554433222211  110    0000 


Q ss_pred             cccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccccC
Q 003786          704 ELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTI  752 (795)
Q Consensus       704 ~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~~  752 (795)
                       ..       .+...+..+.+++.+||+.+|++||++.|+++.|+....
T Consensus       251 -~~-------~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~  291 (298)
T 3f66_A          251 -LL-------QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS  291 (298)
T ss_dssp             -CC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -CC-------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence             00       111123468899999999999999999999999987443

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=9.1e-38  Score=341.66  Aligned_cols=269  Identities=21%  Similarity=0.301  Sum_probs=201.7

Q ss_pred             ccCCccccccCcCCcccEEEeEe-cCcceEEEEEecccCc--cchHHHHHHHHHHHhcCCcccceeeeeeeec-------
Q 003786          474 TANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSG--QGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL-------  543 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-------  543 (795)
                      .++|++.++||+|+||.||+|+. .+++.||||++.....  .....+.+|++++++++||||+++++++...       
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   95 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   95 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence            46899999999999999999987 4689999999865432  2346788999999999999999999998873       


Q ss_pred             -ceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccc
Q 003786          544 -EEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFG  622 (795)
Q Consensus       544 -~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFG  622 (795)
                       +..++||||+++ +|...+...  ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||
T Consensus        96 ~~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg  169 (351)
T 3mi9_A           96 KGSIYLVFDFCEH-DLAGLLSNV--LVKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFG  169 (351)
T ss_dssp             -CEEEEEEECCSE-EHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCT
T ss_pred             CceEEEEEeccCC-CHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCCEEEccch
Confidence             468999999986 555555332  235899999999999999999999998   9999999999999999999999999


Q ss_pred             cccccCCCcc--ccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhH-hHhHhhhcc
Q 003786          623 MARIFGGDEL--QSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTL-LGHAWDLWK  698 (795)
Q Consensus       623 la~~~~~~~~--~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~-~~~~~~~~~  698 (795)
                      +++.......  ........||+.|+|||++.+ ..++.++|||||||++|||++|..||.......... .........
T Consensus       170 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~  249 (351)
T 3mi9_A          170 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT  249 (351)
T ss_dssp             TCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred             hcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence            9987643221  122344678999999998876 568999999999999999999999997654322211 111000000


Q ss_pred             Cc--------ccccccCc--cccchhhHH-----HHHHHHHHHHhhccCCCCCCCCHHHHHHHHc
Q 003786          699 DD--------RAWELIDP--TLQNEASYL-----ILNRYINVGLLCVQEDAADRPTMFEVVSMLT  748 (795)
Q Consensus       699 ~~--------~~~~~id~--~l~~~~~~~-----~~~~l~~li~~cL~~dP~~RPt~~evl~~L~  748 (795)
                      ..        ...+.+..  .........     ....+.+++.+||+.||++|||++|++++-=
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~  314 (351)
T 3mi9_A          250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF  314 (351)
T ss_dssp             TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred             hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCC
Confidence            00        00000000  000001111     1345789999999999999999999999743

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=1.3e-38  Score=337.64  Aligned_cols=247  Identities=23%  Similarity=0.309  Sum_probs=204.5

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      .++|++.+.||+|+||.||+|+.. +++.||||++....   ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus        13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   92 (284)
T 2vgo_A           13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM   92 (284)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence            467999999999999999999875 57889999986532   23456789999999999999999999999999999999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      |||+++++|.+++...   ..+++..+..++.||++||.|||+.+   |+||||||+||+++.++.+||+|||++.....
T Consensus        93 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~  166 (284)
T 2vgo_A           93 LEFAPRGELYKELQKH---GRFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPS  166 (284)
T ss_dssp             ECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTCCEEECCCTTCEECSS
T ss_pred             EEeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEEcCCCCEEEecccccccCcc
Confidence            9999999999988543   35889999999999999999999988   99999999999999999999999999876543


Q ss_pred             CcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcc
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT  709 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~  709 (795)
                      ..    .....|++.|+|||++.+..++.++||||||+++|+|++|..||........  ....   .. .      +..
T Consensus       167 ~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~---~~-~------~~~  230 (284)
T 2vgo_A          167 LR----RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET--HRRI---VN-V------DLK  230 (284)
T ss_dssp             SC----BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH--HHHH---HT-T------CCC
T ss_pred             cc----cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHH--HHHH---hc-c------ccC
Confidence            22    2345789999999999999999999999999999999999999875432211  1100   00 0      000


Q ss_pred             ccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          710 LQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       710 l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                          .+......+.+++.+||+.+|++||++.|++++
T Consensus       231 ----~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h  263 (284)
T 2vgo_A          231 ----FPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH  263 (284)
T ss_dssp             ----CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred             ----CCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence                111233567889999999999999999999985

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=7.9e-39  Score=360.07  Aligned_cols=199  Identities=25%  Similarity=0.377  Sum_probs=166.1

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEeccc--CccchHHHHHHHHHHHhcCCcccceeeeeeeec-----ce
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQ--SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL-----EE  545 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~  545 (795)
                      .++|++.+.||+|+||.||+|+.. +++.||||++...  .....+.+.+|+++|++++||||+++++++...     ..
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~  104 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE  104 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence            478999999999999999999865 5888999999753  223456788999999999999999999999876     57


Q ss_pred             eeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccc
Q 003786          546 KILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR  625 (795)
Q Consensus       546 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~  625 (795)
                      .++||||+. ++|..++..   ...+++..+..++.||+.||.|||+.+   |+||||||+||||+.++.+||+|||+++
T Consensus       105 ~~lv~e~~~-~~L~~~~~~---~~~l~~~~~~~i~~qil~aL~~LH~~g---ivHrDlkp~NILl~~~~~~kL~DFGla~  177 (432)
T 3n9x_A          105 LYIVLEIAD-SDLKKLFKT---PIFLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLAR  177 (432)
T ss_dssp             EEEEEECCS-EEHHHHHHS---SCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             EEEEEecCC-cCHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHeEECCCCCEEEccCCCcc
Confidence            899999987 589888843   345899999999999999999999998   9999999999999999999999999998


Q ss_pred             ccCCCccc--------------------cccccccccccccccccc-ccCCCCcccchhhHHHHHHHHHhCCCCC
Q 003786          626 IFGGDELQ--------------------SKTKRIVGTYGYMSPEYA-QQGLFSIKSDVFSFGVLLLETLSSKRNT  679 (795)
Q Consensus       626 ~~~~~~~~--------------------~~~~~~~gt~~y~APE~~-~~~~~~~k~DvwSlGvil~elltG~~p~  679 (795)
                      ........                    ......+||+.|+|||++ ....++.++|||||||++|||++|..|+
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~  252 (432)
T 3n9x_A          178 TINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH  252 (432)
T ss_dssp             EC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred             cccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence            76432211                    123456899999999985 5677999999999999999999865444

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=6.3e-39  Score=339.83  Aligned_cols=247  Identities=21%  Similarity=0.312  Sum_probs=199.0

Q ss_pred             HccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhc-CCcccceeeeeeeecceeeE
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEEKIL  548 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l  548 (795)
                      ..++|++.+.||+|+||.||+|+.. +++.||||++....  .....++.+|+..+.++ +||||+++++++.+.+..++
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l   88 (289)
T 1x8b_A            9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI   88 (289)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred             ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence            3477999999999999999999875 68999999987542  33456788999999999 99999999999999999999


Q ss_pred             EeecCCCCChhhhhhccCC-cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCC--------------
Q 003786          549 IYEYMPNKSLDFFLFDSTK-ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKD--------------  613 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~--------------  613 (795)
                      ||||+++++|.+++..... ...+++..+..++.||++||.|||+++   |+||||||+|||++.+              
T Consensus        89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~  165 (289)
T 1x8b_A           89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDD  165 (289)
T ss_dssp             EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC----------------
T ss_pred             EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeecCCCHHHEEEcCCCCCccccccccccc
Confidence            9999999999999864322 255899999999999999999999998   9999999999999844              


Q ss_pred             -----CCeeeeccccccccCCCcccccccccccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCcch
Q 003786          614 -----MNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG-LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSL  687 (795)
Q Consensus       614 -----~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~  687 (795)
                           ..+||+|||++.......      ...||+.|+|||++.+. .++.++|||||||++|+|++|.+++....  ..
T Consensus       166 ~~~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~--~~  237 (289)
T 1x8b_A          166 WASNKVMFKIGDLGHVTRISSPQ------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD--QW  237 (289)
T ss_dssp             ----CCCEEECCCTTCEETTCSC------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH--HH
T ss_pred             ccCCceEEEEcccccccccCCcc------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh--HH
Confidence                 479999999998764322      24589999999998775 67789999999999999999987653221  00


Q ss_pred             hHhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          688 TLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       688 ~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                             .........     .    .+...+..+.+++.+||+.||++|||+.|++++
T Consensus       238 -------~~~~~~~~~-----~----~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  280 (289)
T 1x8b_A          238 -------HEIRQGRLP-----R----IPQVLSQEFTELLKVMIHPDPERRPSAMALVKH  280 (289)
T ss_dssp             -------HHHHTTCCC-----C----CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred             -------HHHHcCCCC-----C----CCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence                   001111110     1    111234567889999999999999999999885

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=6.6e-39  Score=353.55  Aligned_cols=255  Identities=11%  Similarity=0.076  Sum_probs=183.8

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCc---cchHHHHHHHHHHHhc--CCcccceee-------eee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG---QGQEEFKNEIKLIAKL--QHRNLVRLL-------GCC  540 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l--~h~niv~l~-------~~~  540 (795)
                      ..+|++.++||+|+||.||+|++. +++.||||++.....   ...+.+++|+.+++.+  +||||++++       +++
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~  140 (371)
T 3q60_A           61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV  140 (371)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred             ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence            456999999999999999999865 689999999976532   3345678886655555  599988855       333


Q ss_pred             eec-----------------ceeeEEeecCCCCChhhhhhccCCcccCChhhH------HHHHHHHHHHHHHHHhcCCCc
Q 003786          541 IEL-----------------EEKILIYEYMPNKSLDFFLFDSTKENLLGWGTR------VRIIEGIAQGLLYLHQYSRLR  597 (795)
Q Consensus       541 ~~~-----------------~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~------~~i~~~i~~~l~~LH~~~~~~  597 (795)
                      ...                 ...++||||++ ++|.+++...  ...+++..+      ..++.||++||+|||+++   
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~---  214 (371)
T 3q60_A          141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL--DFVYVFRGDEGILALHILTAQLIRLAANLQSKG---  214 (371)
T ss_dssp             EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH--HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT---
T ss_pred             ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh--ccccchhhhhhhhhHHHHHHHHHHHHHHHHHCC---
Confidence            322                 34799999999 8999999543  223455556      678899999999999998   


Q ss_pred             EEeccCCCCcEEECCCCCeeeeccccccccCCCccccccccccccccccccccccc--CCCCcccchhhHHHHHHHHHhC
Q 003786          598 VIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQ--GLFSIKSDVFSFGVLLLETLSS  675 (795)
Q Consensus       598 iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~--~~~~~k~DvwSlGvil~elltG  675 (795)
                      |+||||||+||||+.++.+||+|||+++.....     .....+|+.|+|||++.+  ..++.++|||||||++|||++|
T Consensus       215 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg  289 (371)
T 3q60_A          215 LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR-----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCL  289 (371)
T ss_dssp             EEETTCSGGGEEECTTSCEEECCGGGEEETTCE-----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHS
T ss_pred             CccCcCCHHHEEECCCCCEEEEecceeeecCCC-----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhC
Confidence            999999999999999999999999999875422     113457799999999987  6899999999999999999999


Q ss_pred             CCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          676 KRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       676 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      +.||..........       +.....................+..+.+++.+||+.||++|||+.|++++
T Consensus       290 ~~Pf~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  353 (371)
T 3q60_A          290 FLPFGLVTPGIKGS-------WKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMET  353 (371)
T ss_dssp             SCSTTBCCTTCTTC-------CCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTS
T ss_pred             CCCCCCcCcccccc-------hhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            99997654221110       00000000001111111112345678899999999999999999999874

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.9e-39  Score=351.32  Aligned_cols=272  Identities=25%  Similarity=0.380  Sum_probs=207.2

Q ss_pred             ccCCccccccCcCCcccEEEeEe-----cCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecc--ee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRL-----LNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELE--EK  546 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~  546 (795)
                      .++|++.+.||+|+||.||+++.     .+++.||||++........+.+.+|++++++++||||+++++++...+  ..
T Consensus        40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  119 (326)
T 2w1i_A           40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL  119 (326)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred             HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence            46789999999999999999983     358899999998766666678999999999999999999999987654  68


Q ss_pred             eEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          547 ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                      ++||||+++++|.+++...  ...+++..+..++.||++||.|||+.+   |+||||||+||+++.++.+||+|||++..
T Consensus       120 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kL~Dfg~~~~  194 (326)
T 2w1i_A          120 KLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKV  194 (326)
T ss_dssp             EEEECCCTTCBHHHHHHHS--TTSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred             EEEEECCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEEcCCCcEEEecCcchhh
Confidence            9999999999999998543  235889999999999999999999998   99999999999999999999999999987


Q ss_pred             cCCCccc-ccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHh-hhccCccccc
Q 003786          627 FGGDELQ-SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAW-DLWKDDRAWE  704 (795)
Q Consensus       627 ~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~  704 (795)
                      ....... .......++..|+|||.+.+..++.++|||||||++|||++|..|+............... .........+
T Consensus       195 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (326)
T 2w1i_A          195 LPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE  274 (326)
T ss_dssp             CCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHH
T ss_pred             ccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHH
Confidence            6543221 1123345788899999999888999999999999999999999887532100000000000 0000000000


Q ss_pred             ccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          705 LIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       705 ~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                      .+........+...+..+.+++.+||+.||++||++.||++.|+..
T Consensus       275 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l  320 (326)
T 2w1i_A          275 LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI  320 (326)
T ss_dssp             HHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred             HhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            1100001111223446788999999999999999999999998763

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=3.4e-38  Score=341.64  Aligned_cols=262  Identities=23%  Similarity=0.296  Sum_probs=206.3

Q ss_pred             HHhHHHHccCCccc-cccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcC-Ccccceeeeeee
Q 003786          467 LASVSAATANFSTE-NKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQ-HRNLVRLLGCCI  541 (795)
Q Consensus       467 ~~~i~~~~~~~~~~-~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~  541 (795)
                      +.......++|.+. +.||+|+||.||+|+.. +++.||||++....  ......+.+|+.+++++. ||||+++++++.
T Consensus        20 ~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~   99 (327)
T 3lm5_A           20 FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYE   99 (327)
T ss_dssp             SBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEE
T ss_pred             HHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEE
Confidence            34445556778777 89999999999999865 58999999986542  334678999999999995 699999999999


Q ss_pred             ecceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECC---CCCeee
Q 003786          542 ELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDK---DMNPKI  618 (795)
Q Consensus       542 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~---~~~vkL  618 (795)
                      +....++||||+++++|.+++... ....+++..+..++.||+.||+|||+.+   |+||||||+|||++.   ++.+||
T Consensus       100 ~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~ql~~~L~~LH~~g---ivH~Dikp~NIl~~~~~~~~~~kL  175 (327)
T 3lm5_A          100 NTSEIILILEYAAGGEIFSLCLPE-LAEMVSENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDIKI  175 (327)
T ss_dssp             CSSEEEEEEECCTTEEGGGGGSSC-C-CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESCBTTBCCEEE
T ss_pred             eCCeEEEEEEecCCCcHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCChHHEEEecCCCCCcEEE
Confidence            999999999999999999988432 2356899999999999999999999998   999999999999988   789999


Q ss_pred             eccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhcc
Q 003786          619 SDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWK  698 (795)
Q Consensus       619 ~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~  698 (795)
                      +|||+++......   ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...........  ... ..
T Consensus       176 ~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~--i~~-~~  249 (327)
T 3lm5_A          176 VDFGMSRKIGHAC---ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLN--ISQ-VN  249 (327)
T ss_dssp             CCGGGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH--HHH-TC
T ss_pred             eeCccccccCCcc---ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHH--HHh-cc
Confidence            9999998764332   22346799999999999999999999999999999999999999975442222111  000 00


Q ss_pred             CcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          699 DDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       699 ~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                      .         .............+.+++.+||+.||++|||++|++++-
T Consensus       250 ~---------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~  289 (327)
T 3lm5_A          250 V---------DYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHS  289 (327)
T ss_dssp             C---------CCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCG
T ss_pred             c---------ccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCH
Confidence            0         001111122345678899999999999999999999864

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=4.3e-38  Score=342.64  Aligned_cols=265  Identities=23%  Similarity=0.315  Sum_probs=206.5

Q ss_pred             HHHHccCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHh--cCCcccceeeeeeeecc---
Q 003786          470 VSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAK--LQHRNLVRLLGCCIELE---  544 (795)
Q Consensus       470 i~~~~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~---  544 (795)
                      .....++|++.+.||+|+||.||+|+. +++.||||++...   ....+.+|.+++..  ++||||+++++++....   
T Consensus        37 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~  112 (342)
T 1b6c_B           37 QRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW  112 (342)
T ss_dssp             HHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSC
T ss_pred             cccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcc
Confidence            344567899999999999999999987 5899999999643   35678889999987  78999999999998876   


Q ss_pred             -eeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHH--------hcCCCcEEeccCCCCcEEECCCCC
Q 003786          545 -EKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH--------QYSRLRVIHRDLKASNILLDKDMN  615 (795)
Q Consensus       545 -~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH--------~~~~~~iiHrDikp~NIll~~~~~  615 (795)
                       ..++||||+++++|.+++..    ..+++..+..++.||+.||.|||        +.+   |+||||||+|||++.++.
T Consensus       113 ~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~NIll~~~~~  185 (342)
T 1b6c_B          113 TQLWLVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGT  185 (342)
T ss_dssp             CCEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE---EECSCCSGGGEEECTTSC
T ss_pred             ceeEEEEeecCCCcHHHHHhc----cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC---eeeCCCCHHHEEECCCCC
Confidence             78999999999999999843    34889999999999999999999        665   999999999999999999


Q ss_pred             eeeeccccccccCCCccc--ccccccccccccccccccccC------CCCcccchhhHHHHHHHHHhC----------CC
Q 003786          616 PKISDFGMARIFGGDELQ--SKTKRIVGTYGYMSPEYAQQG------LFSIKSDVFSFGVLLLETLSS----------KR  677 (795)
Q Consensus       616 vkL~DFGla~~~~~~~~~--~~~~~~~gt~~y~APE~~~~~------~~~~k~DvwSlGvil~elltG----------~~  677 (795)
                      +||+|||++.........  .......||+.|+|||++.+.      .++.++|||||||++|||++|          ..
T Consensus       186 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~  265 (342)
T 1b6c_B          186 CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQL  265 (342)
T ss_dssp             EEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred             EEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccccccc
Confidence            999999999876433211  123445799999999998765      334789999999999999999          55


Q ss_pred             CCCCCCCcchhHhHhHhhhccCcccccccCccccc-hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          678 NTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQN-EASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       678 p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~-~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                      ||.............. ......    ...+.+.. .........+.+++.+||+.||++|||+.||+++|+..
T Consensus       266 p~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i  334 (342)
T 1b6c_B          266 PYYDLVPSDPSVEEMR-KVVCEQ----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL  334 (342)
T ss_dssp             TTTTTSCSSCCHHHHH-HHHTTS----CCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             CccccCcCcccHHHHH-HHHHHH----HhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHH
Confidence            6644322211111111 111111    11122211 12345667889999999999999999999999999774

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=8e-39  Score=347.50  Aligned_cols=257  Identities=28%  Similarity=0.448  Sum_probs=199.7

Q ss_pred             ccCCccccccCcCCcccEEEeEecC-----cceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLN-----GQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKI  547 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  547 (795)
                      ..+|++.+.||+|+||.||+|+...     +..||||++.... ......+.+|+.++++++||||+++++++.+.+..+
T Consensus        43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  122 (333)
T 1mqb_A           43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM  122 (333)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred             hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence            3578889999999999999998643     2459999997543 233457889999999999999999999999999999


Q ss_pred             EEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccccc
Q 003786          548 LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF  627 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~  627 (795)
                      +||||+++++|.+++...  ...+++..+..++.||++||.|||+++   |+||||||+||+++.++.+||+|||+++..
T Consensus       123 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~  197 (333)
T 1mqb_A          123 IITEYMENGALDKFLREK--DGEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVL  197 (333)
T ss_dssp             EEEECCTTEEHHHHHHHT--TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred             EEEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChheEEECCCCcEEECCCCcchhh
Confidence            999999999999998542  345889999999999999999999998   999999999999999999999999999876


Q ss_pred             CCCccc-ccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccc
Q 003786          628 GGDELQ-SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWEL  705 (795)
Q Consensus       628 ~~~~~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  705 (795)
                      ...... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.......  .....    .....   
T Consensus       198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~--~~~~~----~~~~~---  268 (333)
T 1mqb_A          198 EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE--VMKAI----NDGFR---  268 (333)
T ss_dssp             -------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHHH----HTTCC---
T ss_pred             ccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHH--HHHHH----HCCCc---
Confidence            433211 11223356789999999999999999999999999999998 999986443211  11111    11100   


Q ss_pred             cCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          706 IDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       706 id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                            ...+...+..+.+++.+||+.+|++||++.+++++|+..
T Consensus       269 ------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~  307 (333)
T 1mqb_A          269 ------LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL  307 (333)
T ss_dssp             ------CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             ------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence                  001112345678999999999999999999999998764

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=1.3e-38  Score=363.93  Aligned_cols=251  Identities=25%  Similarity=0.339  Sum_probs=205.5

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      .++|++.++||+|+||.||+|+.. +++.||||++.+..   ....+.+.+|+.+|++++||||+++++++.+....++|
T Consensus        25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  104 (484)
T 3nyv_A           25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV  104 (484)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence            467999999999999999999875 68999999986542   34567899999999999999999999999999999999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEE---CCCCCeeeeccccccc
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILL---DKDMNPKISDFGMARI  626 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll---~~~~~vkL~DFGla~~  626 (795)
                      |||+.+++|.+.+..   ...+++..+..++.||+.||.|||+++   |+||||||+|||+   +.++.+||+|||++..
T Consensus       105 ~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~  178 (484)
T 3nyv_A          105 GEVYTGGELFDEIIS---RKRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTH  178 (484)
T ss_dssp             ECCCCSCBHHHHHHT---CSCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCTTHHHH
T ss_pred             EecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEE
Confidence            999999999888843   345889999999999999999999998   9999999999999   5678999999999987


Q ss_pred             cCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCccccccc
Q 003786          627 FGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELI  706 (795)
Q Consensus       627 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i  706 (795)
                      .....   ......||+.|+|||++.+ .++.++|||||||++|+|++|..||........  ......    ....   
T Consensus       179 ~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--~~~i~~----~~~~---  245 (484)
T 3nyv_A          179 FEASK---KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDI--LKKVEK----GKYT---  245 (484)
T ss_dssp             BCCCC---SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHH----CCCC---
T ss_pred             ccccc---ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHH--HHHHHc----CCCC---
Confidence            65432   2234579999999999876 699999999999999999999999976442221  111100    0000   


Q ss_pred             CccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          707 DPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       707 d~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                         .........+..+.+++.+||+.+|++|||+.|++++
T Consensus       246 ---~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h  282 (484)
T 3nyv_A          246 ---FELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDH  282 (484)
T ss_dssp             ---CCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             ---CCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence               0011112234567899999999999999999999986

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=2.6e-38  Score=362.15  Aligned_cols=251  Identities=23%  Similarity=0.319  Sum_probs=199.1

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      .++|++.++||+|+||.||+|+.. +++.||||++.+..  ......+.+|+.+|+.++||||+++++++.+....++||
T Consensus        36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  115 (494)
T 3lij_A           36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM  115 (494)
T ss_dssp             HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            357999999999999999999875 58899999997543  344678999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCC---CCeeeecccccccc
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKD---MNPKISDFGMARIF  627 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~---~~vkL~DFGla~~~  627 (795)
                      ||+++|+|.+.+...   ..+++..+..++.||++||.|||+.+   |+||||||+|||++..   +.+||+|||++...
T Consensus       116 e~~~~g~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~  189 (494)
T 3lij_A          116 ECYKGGELFDEIIHR---MKFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVF  189 (494)
T ss_dssp             ECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred             ecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChhhEEEeCCCCCCcEEEEECCCCeEC
Confidence            999999998887433   45889999999999999999999998   9999999999999764   55999999999876


Q ss_pred             CCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccC
Q 003786          628 GGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID  707 (795)
Q Consensus       628 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id  707 (795)
                      ....   ......||+.|+|||++. ..++.++|||||||++|+|++|..||........  ......    ... ..  
T Consensus       190 ~~~~---~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--~~~i~~----~~~-~~--  256 (494)
T 3lij_A          190 ENQK---KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEI--LRKVEK----GKY-TF--  256 (494)
T ss_dssp             BTTB---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHH----TCC-CC--
T ss_pred             CCCc---cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHh----CCC-CC--
Confidence            5432   233467999999999886 5699999999999999999999999976443221  111100    000 00  


Q ss_pred             ccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          708 PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       708 ~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                         ........+..+.+++.+||+.+|++|||+.|++++
T Consensus       257 ---~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h  292 (494)
T 3lij_A          257 ---DSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH  292 (494)
T ss_dssp             ---CSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred             ---CchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence               011111234567899999999999999999999975

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2e-38  Score=348.96  Aligned_cols=258  Identities=24%  Similarity=0.282  Sum_probs=196.0

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecc------
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELE------  544 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------  544 (795)
                      .++|++.+.||+|+||.||+|+.. +|+.||||++....  ....+++.+|+++|++++||||+++++++....      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  103 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT  103 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence            478999999999999999999864 68999999986532  233467889999999999999999999988663      


Q ss_pred             eeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccc
Q 003786          545 EKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMA  624 (795)
Q Consensus       545 ~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla  624 (795)
                      ..++||||+ +++|.+++..    ..+++..+..++.||++||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus       104 ~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a  175 (367)
T 1cm8_A          104 DFYLVMPFM-GTDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLA  175 (367)
T ss_dssp             CCEEEEECC-SEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             eEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCHHHEEEcCCCCEEEEeeecc
Confidence            459999999 8899988843    35889999999999999999999998   999999999999999999999999999


Q ss_pred             cccCCCccccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCc--c
Q 003786          625 RIFGGDELQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDD--R  701 (795)
Q Consensus       625 ~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~--~  701 (795)
                      +.....     .....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||...+....  +..........  .
T Consensus       176 ~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--l~~i~~~~g~~~~~  248 (367)
T 1cm8_A          176 RQADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQ--LKEIMKVTGTPPAE  248 (367)
T ss_dssp             EECCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCCCCHH
T ss_pred             cccccc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHhcCCCCHH
Confidence            875422     234678999999999877 6899999999999999999999999976542221  11100000000  0


Q ss_pred             c----------------ccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          702 A----------------WELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       702 ~----------------~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                      .                .......+ ..........+.+++.+||+.||++|||+.|++++-
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp  309 (367)
T 1cm8_A          249 FVQRLQSDEAKNYMKGLPELEKKDF-ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHP  309 (367)
T ss_dssp             HHHTCSCHHHHHHHHHSCCCCCCCG-GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred             HHHHhhhHHHHHHHHhCCCCCCCCH-HHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcCh
Confidence            0                00000000 111122345788999999999999999999999974

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=2.1e-38  Score=348.74  Aligned_cols=253  Identities=15%  Similarity=0.148  Sum_probs=204.1

Q ss_pred             HHccCCccccccCcCCcccEEEeE------ecCcceEEEEEecccCccchHHHHHHHHHHHhcC---Ccccceeeeeeee
Q 003786          472 AATANFSTENKLGEGGFGPVYKGR------LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQ---HRNLVRLLGCCIE  542 (795)
Q Consensus       472 ~~~~~~~~~~~LG~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~  542 (795)
                      ...++|++.++||+|+||.||+|.      ..+++.||||++...   ...++..|++++++++   |+||+++++++..
T Consensus        62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~  138 (365)
T 3e7e_A           62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF  138 (365)
T ss_dssp             CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred             ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence            345789999999999999999994      446889999999653   4567888888888887   9999999999999


Q ss_pred             cceeeEEeecCCCCChhhhhhccC--CcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECC--------
Q 003786          543 LEEKILIYEYMPNKSLDFFLFDST--KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDK--------  612 (795)
Q Consensus       543 ~~~~~lv~E~~~~gsL~~~l~~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~--------  612 (795)
                      .+..++||||+++|+|.+++....  ....+++..+..++.||++||+|||+++   |+||||||+||||+.        
T Consensus       139 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~---ivHrDiKp~NIll~~~~~~~~~~  215 (365)
T 3e7e_A          139 QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE---IIHGDIKPDNFILGNGFLEQDDE  215 (365)
T ss_dssp             SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECGGGTCC---
T ss_pred             CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEecccccCcccc
Confidence            999999999999999999996422  3456999999999999999999999988   999999999999998        


Q ss_pred             ---CCCeeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhH
Q 003786          613 ---DMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTL  689 (795)
Q Consensus       613 ---~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~  689 (795)
                         ++.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++|+.||......... 
T Consensus       216 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~-  294 (365)
T 3e7e_A          216 DDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK-  294 (365)
T ss_dssp             ---CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE-
T ss_pred             ccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCcee-
Confidence               8999999999997654322233345568999999999999999999999999999999999999998532211110 


Q ss_pred             hHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCC-CCHHHHHHHHccc
Q 003786          690 LGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADR-PTMFEVVSMLTNK  750 (795)
Q Consensus       690 ~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~R-Pt~~evl~~L~~~  750 (795)
                                      +...+....   ....+.+++..||+.+|.+| |+++++.+.|+..
T Consensus       295 ----------------~~~~~~~~~---~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~  337 (365)
T 3e7e_A          295 ----------------PEGLFRRLP---HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKV  337 (365)
T ss_dssp             ----------------ECSCCTTCS---SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHH
T ss_pred             ----------------echhccccC---cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHH
Confidence                            011111111   13456688999999999999 5788888777663

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=4.4e-39  Score=342.50  Aligned_cols=256  Identities=27%  Similarity=0.381  Sum_probs=202.7

Q ss_pred             HccCCcccc-ccCcCCcccEEEeEe---cCcceEEEEEecccCc--cchHHHHHHHHHHHhcCCcccceeeeeeeeccee
Q 003786          473 ATANFSTEN-KLGEGGFGPVYKGRL---LNGQEVAVKRLSSQSG--QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEK  546 (795)
Q Consensus       473 ~~~~~~~~~-~LG~G~~g~Vy~~~~---~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  546 (795)
                      ...+|.+.+ .||+|+||.||+|..   ..++.||||++.....  ...+++.+|++++++++||||+++++++ +.+..
T Consensus        14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~   92 (291)
T 1xbb_A           14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESW   92 (291)
T ss_dssp             CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSE
T ss_pred             cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCc
Confidence            346788888 999999999999954   2478899999975432  2356799999999999999999999998 66778


Q ss_pred             eEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          547 ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                      ++||||+++++|.+++..   ...+++..+..++.||++||.|||+.+   |+||||||+||+++.++.+||+|||++..
T Consensus        93 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~  166 (291)
T 1xbb_A           93 MLVMEMAELGPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKA  166 (291)
T ss_dssp             EEEEECCTTEEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred             EEEEEeCCCCCHHHHHHh---CcCCCHHHHHHHHHHHHHHHHHHHhCC---eEcCCCCcceEEEeCCCcEEEccCCccee
Confidence            999999999999999854   345889999999999999999999998   99999999999999999999999999987


Q ss_pred             cCCCccc-ccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCccccc
Q 003786          627 FGGDELQ-SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWE  704 (795)
Q Consensus       627 ~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  704 (795)
                      ....... .......+++.|+|||.+.+..++.++||||||+++|+|++ |+.||........  ....    .....  
T Consensus       167 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~--~~~~----~~~~~--  238 (291)
T 1xbb_A          167 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV--TAML----EKGER--  238 (291)
T ss_dssp             CCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH--HHHH----HTTCC--
T ss_pred             eccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHH--HHHH----HcCCC--
Confidence            6543321 12223456789999999998889999999999999999999 9999875432221  1111    11110  


Q ss_pred             ccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          705 LIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       705 ~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                             ...+...+..+.+++.+||+.||++||++.+|++.|+..
T Consensus       239 -------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~  277 (291)
T 1xbb_A          239 -------MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY  277 (291)
T ss_dssp             -------CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             -------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence                   011122345788999999999999999999999998763

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=1.1e-38  Score=345.31  Aligned_cols=256  Identities=28%  Similarity=0.407  Sum_probs=202.6

Q ss_pred             cCCccccccCcCCcccEEEeEec-Ccce--EEEEEeccc-CccchHHHHHHHHHHHhc-CCcccceeeeeeeecceeeEE
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQE--VAVKRLSSQ-SGQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~--vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv  549 (795)
                      ++|++.+.||+|+||.||+|+.. +++.  +|||++... .....+.+.+|+++++++ +||||+++++++.+.+..++|
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv  104 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA  104 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence            67999999999999999999864 4554  499988653 234456789999999999 899999999999999999999


Q ss_pred             eecCCCCChhhhhhccC-------------CcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCe
Q 003786          550 YEYMPNKSLDFFLFDST-------------KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNP  616 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~v  616 (795)
                      |||+++++|.+++....             ....+++..+..++.||++||.|||+++   |+||||||+|||++.++.+
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~  181 (327)
T 1fvr_A          105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVA  181 (327)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCE
T ss_pred             EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCccceEEEcCCCeE
Confidence            99999999999986542             2346899999999999999999999998   9999999999999999999


Q ss_pred             eeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhh
Q 003786          617 KISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWD  695 (795)
Q Consensus       617 kL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~  695 (795)
                      ||+|||+++.....   .......+++.|+|||++.+..++.++|||||||++|||++ |+.||........  ...   
T Consensus       182 kL~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~--~~~---  253 (327)
T 1fvr_A          182 KIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL--YEK---  253 (327)
T ss_dssp             EECCTTCEESSCEE---CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH--HHH---
T ss_pred             EEcccCcCcccccc---ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHH--HHH---
Confidence            99999999743211   12233457889999999998899999999999999999998 9999865432211  111   


Q ss_pred             hccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcccc
Q 003786          696 LWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKT  751 (795)
Q Consensus       696 ~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~  751 (795)
                       ......         ...+...+..+.+++.+||+.+|++|||+.|++++|....
T Consensus       254 -~~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  299 (327)
T 1fvr_A          254 -LPQGYR---------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML  299 (327)
T ss_dssp             -GGGTCC---------CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             -hhcCCC---------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence             111100         0111123456889999999999999999999999987743

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=1.2e-38  Score=349.78  Aligned_cols=263  Identities=24%  Similarity=0.317  Sum_probs=203.9

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      .++|++.+.||+|+||.||+++.. +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus        32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  111 (360)
T 3eqc_A           32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME  111 (360)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence            367999999999999999999875 58899999987542 3345678999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhc-CCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY-SRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      |+++++|.+++...   ..+++..+..++.||++||.|||+. +   |+||||||+|||++.++.+||+|||++..... 
T Consensus       112 ~~~~~~L~~~l~~~---~~~~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~-  184 (360)
T 3eqc_A          112 HMDGGSLDQVLKKA---GRIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-  184 (360)
T ss_dssp             CCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEECCCCCCHHHHH-
T ss_pred             CCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHhCC---EEcCCccHHHEEECCCCCEEEEECCCCccccc-
Confidence            99999999998543   3588999999999999999999986 6   99999999999999999999999999975422 


Q ss_pred             cccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhh----------hccCc
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWD----------LWKDD  700 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~----------~~~~~  700 (795)
                         .......||+.|+|||++.+..++.++|||||||++|+|++|+.||................          .....
T Consensus       185 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (360)
T 3eqc_A          185 ---SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPG  261 (360)
T ss_dssp             ---HC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------
T ss_pred             ---ccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCC
Confidence               12334579999999999999999999999999999999999999997654322211100000          00000


Q ss_pred             --------------ccccccC----ccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          701 --------------RAWELID----PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       701 --------------~~~~~id----~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                                    ...+.++    ..............+.+++.+||+.||++|||+.|++++
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  325 (360)
T 3eqc_A          262 RPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH  325 (360)
T ss_dssp             ------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             CcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence                          0000000    000000011134568899999999999999999999986

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=1e-38  Score=349.51  Aligned_cols=264  Identities=14%  Similarity=0.142  Sum_probs=205.2

Q ss_pred             ccCCccccccCcCCcccEEEeEecC---------cceEEEEEecccCccchHHHHHHHHHHHhcCCcccce---------
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLN---------GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR---------  535 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~---------  535 (795)
                      .++|++.+.||+|+||.||+|+...         ++.||||++...     +.+.+|++++++++||||++         
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~  115 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP  115 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence            4689999999999999999998753         789999998643     57889999999999999998         


Q ss_pred             ------eeeeeee-cceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcE
Q 003786          536 ------LLGCCIE-LEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNI  608 (795)
Q Consensus       536 ------l~~~~~~-~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NI  608 (795)
                            +++++.. ....++||||+ +++|.+++... ....+++..+..++.||+.||.|||+++   |+||||||+||
T Consensus       116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NI  190 (352)
T 2jii_A          116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS-PKHVLSERSVLQVACRLLDALEFLHENE---YVHGNVTAENI  190 (352)
T ss_dssp             TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCGGGE
T ss_pred             ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhC-CcCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHE
Confidence                  5666665 67889999999 99999999643 2356899999999999999999999998   99999999999


Q ss_pred             EECCCC--CeeeeccccccccCCCccc-----ccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCC
Q 003786          609 LLDKDM--NPKISDFGMARIFGGDELQ-----SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDF  681 (795)
Q Consensus       609 ll~~~~--~vkL~DFGla~~~~~~~~~-----~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~  681 (795)
                      |++.++  .+||+|||+++........     .......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus       191 l~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~  270 (352)
T 2jii_A          191 FVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTN  270 (352)
T ss_dssp             EEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGG
T ss_pred             EEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence            999998  8999999999876432211     112335799999999999999999999999999999999999999976


Q ss_pred             CCCcchhHhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccccC
Q 003786          682 SNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTI  752 (795)
Q Consensus       682 ~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~~  752 (795)
                      .................  ....+.+....   ....+..+.+++.+||+.||++||++++|+++|+....
T Consensus       271 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~  336 (352)
T 2jii_A          271 CLPNTEDIMKQKQKFVD--KPGPFVGPCGH---WIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQ  336 (352)
T ss_dssp             GTTCHHHHHHHHHHHHH--SCCCEECTTSC---EECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred             CCcCHHHHHHHHHhccC--Chhhhhhhccc---cCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHH
Confidence            54222222221111111  11111111100   01123568889999999999999999999999977443

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=2.8e-38  Score=336.69  Aligned_cols=250  Identities=25%  Similarity=0.317  Sum_probs=205.4

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      .++|.+.+.||+|+||.||+++.. +++.+|+|++....   ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   93 (294)
T 2rku_A           14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV   93 (294)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence            467999999999999999999876 47889999986542   23456788999999999999999999999999999999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      |||+++++|.+++..   ...+++..+..++.||++||.|||+++   |+||||||+||+++.++.+||+|||++.....
T Consensus        94 ~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~  167 (294)
T 2rku_A           94 LELCRRRSLLELHKR---RKALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY  167 (294)
T ss_dssp             EECCTTCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             EecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEcCCCCEEEEeccCceeccc
Confidence            999999999988743   345889999999999999999999998   99999999999999999999999999987643


Q ss_pred             CcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcc
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT  709 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~  709 (795)
                      ..  .......||+.|+|||.+.+..++.++||||||+++|+|++|+.||......... . .    ......      .
T Consensus       168 ~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~-~-~----~~~~~~------~  233 (294)
T 2rku_A          168 DG--ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY-L-R----IKKNEY------S  233 (294)
T ss_dssp             TT--CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH-H-H----HHTTCC------C
T ss_pred             Cc--cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-H-H----HhhccC------C
Confidence            22  1223457899999999999989999999999999999999999998754322111 0 0    000000      0


Q ss_pred             ccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          710 LQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       710 l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                          .+......+.+++.+||+.||++|||+.|++++.
T Consensus       234 ----~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~  267 (294)
T 2rku_A          234 ----IPKHINPVAASLIQKMLQTDPTARPTINELLNDE  267 (294)
T ss_dssp             ----CCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSH
T ss_pred             ----CccccCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence                1112234677899999999999999999999864

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=2.1e-38  Score=352.27  Aligned_cols=263  Identities=18%  Similarity=0.235  Sum_probs=198.5

Q ss_pred             ccCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecce------ee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEE------KI  547 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------~~  547 (795)
                      ..+|++.+.||+|+||.||+|+...+..+|+|++....    ....+|+++|+.++||||+++++++.....      .+
T Consensus        39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~----~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~  114 (394)
T 4e7w_A           39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK----RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN  114 (394)
T ss_dssp             EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred             cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCc----chHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence            45799999999999999999998777779999885432    223479999999999999999999965543      78


Q ss_pred             EEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEEC-CCCCeeeeccccccc
Q 003786          548 LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLD-KDMNPKISDFGMARI  626 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~-~~~~vkL~DFGla~~  626 (795)
                      +||||++++.+............+++..+..++.||++||.|||+++   |+||||||+||||+ .++.+||+|||+++.
T Consensus       115 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~kL~DFG~a~~  191 (394)
T 4e7w_A          115 LVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKI  191 (394)
T ss_dssp             EEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             EEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence            99999998766554433334556899999999999999999999998   99999999999999 799999999999987


Q ss_pred             cCCCcccccccccccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHh-----------
Q 003786          627 FGGDELQSKTKRIVGTYGYMSPEYAQQG-LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAW-----------  694 (795)
Q Consensus       627 ~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~-----------  694 (795)
                      ......   .....||+.|+|||++.+. .++.++|||||||++|||++|+.||...+...........           
T Consensus       192 ~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~  268 (394)
T 4e7w_A          192 LIAGEP---NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKT  268 (394)
T ss_dssp             CCTTCC---CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHH
T ss_pred             ccCCCC---CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence            643322   2345789999999988764 6999999999999999999999999765422211110000           


Q ss_pred             --hhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          695 --DLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       695 --~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                        ..+............+...........+.+++.+||+.||++|||+.|+++|
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  322 (394)
T 4e7w_A          269 MNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH  322 (394)
T ss_dssp             HCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             hChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence              0000000000000000011112234578899999999999999999999997

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=3.1e-39  Score=341.23  Aligned_cols=260  Identities=26%  Similarity=0.365  Sum_probs=204.5

Q ss_pred             HccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeee--cceee
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIE--LEEKI  547 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~  547 (795)
                      ..++|++.+.||+|+||.||+++.. +++.||+|++....  ....+.+.+|+.++++++||||+++++++.+  ....+
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   83 (279)
T 2w5a_A            4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY   83 (279)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEE
T ss_pred             chhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEE
Confidence            3578999999999999999999875 58999999996542  2345678999999999999999999998854  56789


Q ss_pred             EEeecCCCCChhhhhhccCC-cccCChhhHHHHHHHHHHHHHHHHhcC--CCcEEeccCCCCcEEECCCCCeeeeccccc
Q 003786          548 LIYEYMPNKSLDFFLFDSTK-ENLLGWGTRVRIIEGIAQGLLYLHQYS--RLRVIHRDLKASNILLDKDMNPKISDFGMA  624 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~--~~~iiHrDikp~NIll~~~~~vkL~DFGla  624 (795)
                      +||||+++++|.+++..... ...+++..+..++.||+.||.|||+.+  ..+|+||||||+||+++.++.+||+|||++
T Consensus        84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~  163 (279)
T 2w5a_A           84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA  163 (279)
T ss_dssp             EEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHH
T ss_pred             EEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchh
Confidence            99999999999999864332 345899999999999999999999976  234999999999999999999999999999


Q ss_pred             cccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCccccc
Q 003786          625 RIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWE  704 (795)
Q Consensus       625 ~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  704 (795)
                      ........  ......|++.|+|||.+.+..++.++||||||+++|+|++|+.||........  ....    ...... 
T Consensus       164 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~i----~~~~~~-  234 (279)
T 2w5a_A          164 RILNHDTS--FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL--AGKI----REGKFR-  234 (279)
T ss_dssp             HHC---CH--HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHH----HHTCCC-
T ss_pred             eeeccccc--cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHH--HHHH----hhcccc-
Confidence            87643321  12345789999999999998999999999999999999999999875432211  1111    111110 


Q ss_pred             ccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          705 LIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       705 ~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                              ..+...+..+.+++.+||+.+|++||++.||++++..
T Consensus       235 --------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~  271 (279)
T 2w5a_A          235 --------RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI  271 (279)
T ss_dssp             --------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             --------cCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence                    1111234578899999999999999999999997655

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=4.1e-38  Score=335.40  Aligned_cols=261  Identities=19%  Similarity=0.230  Sum_probs=204.8

Q ss_pred             ccCCccccccCcCCcccEEEeEe-cCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeee-eecceeeEEee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCC-IELEEKILIYE  551 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lv~E  551 (795)
                      .++|++.+.||+|+||.||+|+. .+++.||||++....  ..+.+.+|+.+++.++|++++..+..+ .+....++|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   85 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence            47899999999999999999986 568999999986543  345689999999999998877766655 56677899999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEE---CCCCCeeeeccccccccC
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILL---DKDMNPKISDFGMARIFG  628 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll---~~~~~vkL~DFGla~~~~  628 (795)
                      |+ +++|.+++...  ...+++..+..++.||+.||+|||+++   |+||||||+|||+   +.++.+||+|||++....
T Consensus        86 ~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~  159 (296)
T 3uzp_A           86 LL-GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR  159 (296)
T ss_dssp             CC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred             ec-CCCHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHeEEecCCCCCeEEEeeCCCccccc
Confidence            99 99999998532  345899999999999999999999998   9999999999999   488999999999998765


Q ss_pred             CCccc-----ccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcc-hhHhHhHhhhccCccc
Q 003786          629 GDELQ-----SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNS-LTLLGHAWDLWKDDRA  702 (795)
Q Consensus       629 ~~~~~-----~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~  702 (795)
                      .....     .......||+.|+|||.+.+..++.++|||||||++|||++|+.||....... ............... 
T Consensus       160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-  238 (296)
T 3uzp_A          160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP-  238 (296)
T ss_dssp             CTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC-
T ss_pred             ccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCc-
Confidence            43221     11244679999999999999999999999999999999999999997644221 111111100000000 


Q ss_pred             ccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcccc
Q 003786          703 WELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKT  751 (795)
Q Consensus       703 ~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~  751 (795)
                              ........+..+.+++.+||+.||++||++.+|++.|+...
T Consensus       239 --------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~  279 (296)
T 3uzp_A          239 --------IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF  279 (296)
T ss_dssp             --------HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred             --------hHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHH
Confidence                    00011123457889999999999999999999999997743

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=1.9e-38  Score=344.78  Aligned_cols=250  Identities=25%  Similarity=0.328  Sum_probs=205.4

Q ss_pred             HccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeE
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKIL  548 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  548 (795)
                      ...+|.+.+.||+|+||.||+++.. +++.||+|++....   ....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus        39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  118 (335)
T 2owb_A           39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV  118 (335)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence            3468999999999999999999875 47889999986542   2345678899999999999999999999999999999


Q ss_pred             EeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccC
Q 003786          549 IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      ||||+++++|.+++..   ...+++..+..++.||++||.|||+++   |+||||||+|||++.++.+||+|||++....
T Consensus       119 v~e~~~~~~L~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~  192 (335)
T 2owb_A          119 VLELCRRRSLLELHKR---RKALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVE  192 (335)
T ss_dssp             EECCCTTCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEecCCCCCHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---CEecCCCchhEEEcCCCCEEEeeccCceecc
Confidence            9999999999998843   345889999999999999999999998   9999999999999999999999999998764


Q ss_pred             CCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCc
Q 003786          629 GDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP  708 (795)
Q Consensus       629 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~  708 (795)
                      ...  .......||+.|+|||++.+..++.++|||||||++|+|++|+.||......... . ..    .....      
T Consensus       193 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~-~~----~~~~~------  258 (335)
T 2owb_A          193 YDG--ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY-L-RI----KKNEY------  258 (335)
T ss_dssp             STT--CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH-H-HH----HHTCC------
T ss_pred             cCc--ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHH-H-HH----hcCCC------
Confidence            322  1233467999999999999999999999999999999999999999754322111 0 00    00000      


Q ss_pred             cccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          709 TLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       709 ~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .+    +......+.+++.+||+.||++||++.|++++
T Consensus       259 ~~----~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~  292 (335)
T 2owb_A          259 SI----PKHINPVAASLIQKMLQTDPTARPTINELLND  292 (335)
T ss_dssp             CC----CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             CC----CccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            00    11123467789999999999999999999985

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=3.4e-38  Score=337.58  Aligned_cols=250  Identities=26%  Similarity=0.369  Sum_probs=206.1

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      .+.|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++++++||||+++++++.+....++|||
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  100 (303)
T 3a7i_A           21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME  100 (303)
T ss_dssp             GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence            366999999999999999999864 58899999996543 3445789999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      |+++++|.+++..    ..+++..+..++.||+.||.|||+.+   |+||||||+||+++.++.+||+|||++.......
T Consensus       101 ~~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~  173 (303)
T 3a7i_A          101 YLGGGSALDLLEP----GPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ  173 (303)
T ss_dssp             CCTTEEHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECBTTB
T ss_pred             eCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChheEEECCCCCEEEeecccceecCccc
Confidence            9999999998842    45889999999999999999999998   9999999999999999999999999998765432


Q ss_pred             ccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcccc
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQ  711 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~  711 (795)
                      .  ......||+.|+|||++.+..++.++||||||+++|+|++|+.|+........  .....    ...     .+.+ 
T Consensus       174 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~~~----~~~-----~~~~-  239 (303)
T 3a7i_A          174 I--KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKV--LFLIP----KNN-----PPTL-  239 (303)
T ss_dssp             C--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH--HHHHH----HSC-----CCCC-
T ss_pred             c--ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHH--HHHhh----cCC-----CCCC-
Confidence            1  22345789999999999999999999999999999999999999865432211  11100    000     0111 


Q ss_pred             chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          712 NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       712 ~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                         ....+..+.+++.+||+.+|++|||+.|++++.
T Consensus       240 ---~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~  272 (303)
T 3a7i_A          240 ---EGNYSKPLKEFVEACLNKEPSFRPTAKELLKHK  272 (303)
T ss_dssp             ---CSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred             ---ccccCHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence               112234678899999999999999999999864

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=6e-38  Score=344.95  Aligned_cols=255  Identities=21%  Similarity=0.303  Sum_probs=204.5

Q ss_pred             HHHccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCcc--------chHHHHHHHHHHHhc-CCcccceeeeee
Q 003786          471 SAATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQ--------GQEEFKNEIKLIAKL-QHRNLVRLLGCC  540 (795)
Q Consensus       471 ~~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l-~h~niv~l~~~~  540 (795)
                      ....++|++.+.||+|+||.||+|++. +|+.||||++......        ..+.+.+|+.+++++ +||||+++++++
T Consensus        90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  169 (365)
T 2y7j_A           90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY  169 (365)
T ss_dssp             HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence            344578999999999999999999875 6999999998654311        135678999999999 799999999999


Q ss_pred             eecceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeec
Q 003786          541 IELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISD  620 (795)
Q Consensus       541 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~D  620 (795)
                      ......++||||+++++|.+++..   ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|
T Consensus       170 ~~~~~~~lv~e~~~g~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~LH~~g---i~H~Dlkp~NIl~~~~~~ikl~D  243 (365)
T 2y7j_A          170 ESSSFMFLVFDLMRKGELFDYLTE---KVALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSD  243 (365)
T ss_dssp             EBSSEEEEEECCCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECC
T ss_pred             eeCCEEEEEEEeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEEe
Confidence            999999999999999999999853   345889999999999999999999998   99999999999999999999999


Q ss_pred             cccccccCCCccccccccccccccccccccccc------CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHh
Q 003786          621 FGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQ------GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAW  694 (795)
Q Consensus       621 FGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~------~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~  694 (795)
                      ||++.......   ......||+.|+|||++.+      ..++.++|||||||++|+|++|+.||.......  ......
T Consensus       244 fG~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~--~~~~i~  318 (365)
T 2y7j_A          244 FGFSCHLEPGE---KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQIL--MLRMIM  318 (365)
T ss_dssp             CTTCEECCTTC---CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHH
T ss_pred             cCcccccCCCc---ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHH--HHHHHH
Confidence            99998765432   2334679999999998853      368899999999999999999999986533211  111110


Q ss_pred             hhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          695 DLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       695 ~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .    ...      ..........+..+.+++.+||+.||++|||+.|++++
T Consensus       319 ~----~~~------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  360 (365)
T 2y7j_A          319 E----GQY------QFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQH  360 (365)
T ss_dssp             H----TCC------CCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             h----CCC------CCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            0    000      00000111223567899999999999999999999985

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.3e-38  Score=351.00  Aligned_cols=260  Identities=28%  Similarity=0.388  Sum_probs=194.6

Q ss_pred             cCCccccccCcCCcccEEEeEecC----cceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeee-cceeeE
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLN----GQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIE-LEEKIL  548 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~l  548 (795)
                      ..|++.+.||+|+||.||+|+..+    +..||||.+.... ....+++.+|+.++++++||||+++++++.+ .+..++
T Consensus        89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~l  168 (373)
T 3c1x_A           89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  168 (373)
T ss_dssp             EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEE
T ss_pred             ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEE
Confidence            457788999999999999998642    2468999986543 2345789999999999999999999998754 457899


Q ss_pred             EeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccC
Q 003786          549 IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      ||||+++++|.+++...  ...+++..+..++.||++||.|||+++   |+||||||+|||++.++.+||+|||+++...
T Consensus       169 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~  243 (373)
T 3c1x_A          169 VLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMY  243 (373)
T ss_dssp             EEECCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred             EEECCCCCCHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCccchheEEECCCCCEEEeecccccccc
Confidence            99999999999999532  345788899999999999999999998   9999999999999999999999999998654


Q ss_pred             CCccc--ccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccc
Q 003786          629 GDELQ--SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWEL  705 (795)
Q Consensus       629 ~~~~~--~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  705 (795)
                      .....  .......+|+.|+|||.+.+..++.++|||||||++|||++ |.+|+..........  ..    .....  .
T Consensus       244 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~--~~----~~~~~--~  315 (373)
T 3c1x_A          244 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV--YL----LQGRR--L  315 (373)
T ss_dssp             --------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHH--HH----HTTCC--C
T ss_pred             ccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHH--HH----HcCCC--C
Confidence            33221  11233457889999999999999999999999999999999 666665544332211  11    00110  0


Q ss_pred             cCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccccCCC
Q 003786          706 IDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINL  754 (795)
Q Consensus       706 id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~~~l  754 (795)
                      .       .+...+..+.+++.+||+.+|++||++.|++++|+.....+
T Consensus       316 ~-------~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~  357 (373)
T 3c1x_A          316 L-------QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF  357 (373)
T ss_dssp             C-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred             C-------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence            0       11123456789999999999999999999999998754433

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=5.7e-38  Score=340.01  Aligned_cols=257  Identities=20%  Similarity=0.296  Sum_probs=202.1

Q ss_pred             ccCCccccccCcCCcccEEEeEe-cCcceEEEEEecccCccchHHHHHHHHHHHhcC-Ccccceeeeeeee--cceeeEE
Q 003786          474 TANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQ-HRNLVRLLGCCIE--LEEKILI  549 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~--~~~~~lv  549 (795)
                      .++|++.++||+|+||.||+|+. .+++.||||++..   ...+.+.+|+++|++++ ||||+++++++.+  ....++|
T Consensus        35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv  111 (330)
T 3nsz_A           35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP---VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV  111 (330)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS---CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc---cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence            47899999999999999999986 4689999999864   34578999999999997 9999999999987  6678999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCC-CeeeeccccccccC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDM-NPKISDFGMARIFG  628 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~-~vkL~DFGla~~~~  628 (795)
                      |||+++++|..++.      .+++..+..++.||+.||+|||+++   |+||||||+|||++.++ .+||+|||+++...
T Consensus       112 ~e~~~~~~l~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~  182 (330)
T 3nsz_A          112 FEHVNNTDFKQLYQ------TLTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH  182 (330)
T ss_dssp             EECCCCCCHHHHGG------GCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred             EeccCchhHHHHHH------hCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcC
Confidence            99999999998873      3788899999999999999999998   99999999999999777 89999999998765


Q ss_pred             CCccccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccc----
Q 003786          629 GDELQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAW----  703 (795)
Q Consensus       629 ~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~----  703 (795)
                      ...   ......|++.|+|||++.+ ..++.++|||||||++|+|++|+.||.........+..... ........    
T Consensus       183 ~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~-~~~~~~~~~~~~  258 (330)
T 3nsz_A          183 PGQ---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK-VLGTEDLYDYID  258 (330)
T ss_dssp             TTC---CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHH-HHCHHHHHHHHH
T ss_pred             CCC---ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHH-hcCCchhhhHHH
Confidence            432   2234578999999999877 67999999999999999999999998544332221111100 00000000    


Q ss_pred             -------------------cccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          704 -------------------ELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       704 -------------------~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                                         ..................+.+++.+||+.||++|||++|++++
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  320 (330)
T 3nsz_A          259 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH  320 (330)
T ss_dssp             HTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             HhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence                               0000011111222245678899999999999999999999985

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=6.6e-39  Score=338.67  Aligned_cols=249  Identities=28%  Similarity=0.401  Sum_probs=196.7

Q ss_pred             ccCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeec-ceeeEEeec
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL-EEKILIYEY  552 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lv~E~  552 (795)
                      .++|++.+.||+|+||.||+++. .++.||||++...  ...+.+.+|++++++++||||+++++++.+. +..++||||
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~   96 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY   96 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred             hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecch--hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence            47899999999999999999987 4889999999654  3557899999999999999999999987654 478999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      +++++|.+++... ....+++..+..++.|+++||.|||+++   |+||||||+||+++.++.+||+|||++......  
T Consensus        97 ~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~--  170 (278)
T 1byg_A           97 MAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST--  170 (278)
T ss_dssp             CTTEEHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC---------
T ss_pred             CCCCCHHHHHHhc-ccccCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCCcceEEEeCCCcEEEeecccccccccc--
Confidence            9999999998542 2234788899999999999999999998   999999999999999999999999999865322  


Q ss_pred             cccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCcccc
Q 003786          633 QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQ  711 (795)
Q Consensus       633 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~  711 (795)
                         .....+++.|+|||.+.+..++.++||||||+++|+|++ |+.|+........  ...    .....         .
T Consensus       171 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~--~~~----~~~~~---------~  232 (278)
T 1byg_A          171 ---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV--VPR----VEKGY---------K  232 (278)
T ss_dssp             --------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGH--HHH----HTTTC---------C
T ss_pred             ---ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHH--HHH----HhcCC---------C
Confidence               123457889999999999999999999999999999998 9999875432221  111    11110         0


Q ss_pred             chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          712 NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       712 ~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      ...+...+..+.+++.+||+.||++||++.|+++.|+.
T Consensus       233 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~  270 (278)
T 1byg_A          233 MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEH  270 (278)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHH
Confidence            11112234578899999999999999999999999876

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=3.8e-38  Score=361.76  Aligned_cols=252  Identities=25%  Similarity=0.341  Sum_probs=201.9

Q ss_pred             HccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCc-------------cchHHHHHHHHHHHhcCCcccceeee
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG-------------QGQEEFKNEIKLIAKLQHRNLVRLLG  538 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~l~~  538 (795)
                      ..++|++.++||+|+||.||+|+.. +++.||||++.+...             ...+.+.+|+.+|++++||||+++++
T Consensus        34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~  113 (504)
T 3q5i_A           34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD  113 (504)
T ss_dssp             GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence            3578999999999999999999875 478999999865421             33567899999999999999999999


Q ss_pred             eeeecceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCC---C
Q 003786          539 CCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDM---N  615 (795)
Q Consensus       539 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~---~  615 (795)
                      ++.+....++||||+++|+|.+.+..   ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.++   .
T Consensus       114 ~~~~~~~~~lv~e~~~gg~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~  187 (504)
T 3q5i_A          114 VFEDKKYFYLVTEFYEGGELFEQIIN---RHKFDECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLN  187 (504)
T ss_dssp             EEECSSEEEEEEECCTTCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESSTTCCSS
T ss_pred             EEEcCCEEEEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCcHHHEEEecCCCCcc
Confidence            99999999999999999999888843   345899999999999999999999998   99999999999998776   6


Q ss_pred             eeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhh
Q 003786          616 PKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWD  695 (795)
Q Consensus       616 vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~  695 (795)
                      +||+|||++.......   ......||+.|+|||++. ..++.++|||||||++|+|++|..||........  ..... 
T Consensus       188 ~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--~~~i~-  260 (504)
T 3q5i_A          188 IKIVDFGLSSFFSKDY---KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDI--IKKVE-  260 (504)
T ss_dssp             EEECCCTTCEECCTTS---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHH-
T ss_pred             EEEEECCCCEEcCCCC---ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHH-
Confidence            9999999998765432   233467999999999987 4689999999999999999999999976443221  11110 


Q ss_pred             hccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          696 LWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       696 ~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                         ....      ..........+..+.+++.+||+.||.+|||+.|++++
T Consensus       261 ---~~~~------~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h  302 (504)
T 3q5i_A          261 ---KGKY------YFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS  302 (504)
T ss_dssp             ---HCCC------CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             ---cCCC------CCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence               0000      00001111234578899999999999999999999986

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=5.7e-39  Score=350.60  Aligned_cols=247  Identities=32%  Similarity=0.421  Sum_probs=198.7

Q ss_pred             cCCccccccCcCCcccEEEeEe-cCcceEEEEEecccCc---cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          475 ANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSG---QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      ..|+..+.||+|+||.||+|+. .+++.||||++.....   ...+.+.+|+++|++++||||+++++++.+.+..++||
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  133 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM  133 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence            4589999999999999999986 4689999999865432   23357889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      ||+. |+|.+++...  ...+++..+..++.||++||.|||+.+   |+||||||+|||++.++.+||+|||++..... 
T Consensus       134 e~~~-g~l~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~-  206 (348)
T 1u5q_A          134 EYCL-GSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-  206 (348)
T ss_dssp             ECCS-EEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTCBSSSS-
T ss_pred             ecCC-CCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEeeccCceecCC-
Confidence            9998 5676666432  345889999999999999999999998   99999999999999999999999999986542 


Q ss_pred             cccccccccccccccccccccc---cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccC
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQ---QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID  707 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~---~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id  707 (795)
                           .....||+.|+|||++.   ...++.++|||||||++|||++|+.|+........  ..   .......      
T Consensus       207 -----~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~--~~---~~~~~~~------  270 (348)
T 1u5q_A          207 -----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA--LY---HIAQNES------  270 (348)
T ss_dssp             -----BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH--HH---HHHHSCC------
T ss_pred             -----CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH--HH---HHHhcCC------
Confidence                 23357999999999884   56789999999999999999999999865432111  11   1111110      


Q ss_pred             ccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          708 PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       708 ~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                      +...   ....+..+.+++.+||+.+|++|||+.+++++.
T Consensus       271 ~~~~---~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~  307 (348)
T 1u5q_A          271 PALQ---SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR  307 (348)
T ss_dssp             CCCC---CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCH
T ss_pred             CCCC---CCCCCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence            0010   111234677899999999999999999999864

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.4e-38  Score=372.76  Aligned_cols=255  Identities=25%  Similarity=0.395  Sum_probs=200.8

Q ss_pred             cCCcccc-ccCcCCcccEEEeEec---CcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          475 ANFSTEN-KLGEGGFGPVYKGRLL---NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       475 ~~~~~~~-~LG~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      +++.+.+ +||+|+||.||+|.+.   ++..||||++.... ....+++.+|+++|++++|||||++++++.. +..++|
T Consensus       335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv  413 (613)
T 2ozo_A          335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLV  413 (613)
T ss_dssp             TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEE
T ss_pred             cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEE
Confidence            3444444 7999999999999764   46679999997653 3356789999999999999999999999876 568999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      |||+++|+|.+++...  ...+++..+..++.||+.||.|||+++   |+||||||+||||+.++.+||+|||+++....
T Consensus       414 ~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~  488 (613)
T 2ozo_A          414 MEMAGGGPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGA  488 (613)
T ss_dssp             EECCTTCBHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCSTTTTCC-
T ss_pred             EEeCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCcCCHHHEEEcCCCcEEEeeccCcccccC
Confidence            9999999999998532  455899999999999999999999998   99999999999999999999999999987643


Q ss_pred             Cccc-ccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccC
Q 003786          630 DELQ-SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID  707 (795)
Q Consensus       630 ~~~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id  707 (795)
                      .... .......+++.|+|||++.+..++.++|||||||++|||++ |+.||........  ....    ..+.      
T Consensus       489 ~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~--~~~i----~~~~------  556 (613)
T 2ozo_A          489 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV--MAFI----EQGK------  556 (613)
T ss_dssp             -------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHH--HHHH----HTTC------
T ss_pred             CCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH--HHHH----HcCC------
Confidence            3211 11222345789999999999999999999999999999998 9999876543322  1111    1111      


Q ss_pred             ccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          708 PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       708 ~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                         ....+..++..+.+++.+||+.+|++||++.+|++.|+..
T Consensus       557 ---~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~  596 (613)
T 2ozo_A          557 ---RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC  596 (613)
T ss_dssp             ---CCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHH
T ss_pred             ---CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence               1112223456788999999999999999999999998763

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=3e-38  Score=333.08  Aligned_cols=249  Identities=24%  Similarity=0.367  Sum_probs=196.9

Q ss_pred             HccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeE
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKIL  548 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  548 (795)
                      ..++|++.+.||+|+||.||+|+.. +++.||||++....   ....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus         9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   88 (276)
T 2h6d_A            9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFM   88 (276)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             eeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEE
Confidence            3478999999999999999999875 68999999986532   2345688999999999999999999999999999999


Q ss_pred             EeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccC
Q 003786          549 IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      ||||+++++|.+++...   ..+++..+..++.||+.||.|||+++   |+||||||+||+++.++.+||+|||++....
T Consensus        89 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~  162 (276)
T 2h6d_A           89 VMEYVSGGELFDYICKH---GRVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMS  162 (276)
T ss_dssp             EEECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHHC---SSCCCCCGGGEEECTTSCEEECCCCGGGCCC
T ss_pred             EEeccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChhhEEECCCCCEEEeecccccccC
Confidence            99999999999998543   35889999999999999999999998   9999999999999999999999999998765


Q ss_pred             CCcccccccccccccccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccC
Q 003786          629 GDELQSKTKRIVGTYGYMSPEYAQQGLF-SIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID  707 (795)
Q Consensus       629 ~~~~~~~~~~~~gt~~y~APE~~~~~~~-~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id  707 (795)
                      ...   ......|++.|+|||.+.+..+ +.++||||||+++|+|++|+.||........  ....    .....     
T Consensus       163 ~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~--~~~~----~~~~~-----  228 (276)
T 2h6d_A          163 DGE---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTL--FKKI----RGGVF-----  228 (276)
T ss_dssp             C----------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHH----HHCCC-----
T ss_pred             CCc---ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH--HHHh----hcCcc-----
Confidence            432   1233578999999999987765 6899999999999999999999865432111  1111    00000     


Q ss_pred             ccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          708 PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       708 ~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                       .    .+......+.+++.+||+.||++|||+.|++++
T Consensus       229 -~----~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h  262 (276)
T 2h6d_A          229 -Y----IPEYLNRSVATLLMHMLQVDPLKRATIKDIREH  262 (276)
T ss_dssp             -C----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             -c----CchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence             0    111123467789999999999999999999986

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=7.7e-39  Score=342.10  Aligned_cols=266  Identities=24%  Similarity=0.350  Sum_probs=188.1

Q ss_pred             HHccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          472 AATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       472 ~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      ...++|++.+.||+|+||.||+|+.. +++.||||++.... ....+++.+|+.++++++||||+++++++...+..++|
T Consensus        12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   91 (303)
T 2vwi_A           12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV   91 (303)
T ss_dssp             -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred             cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence            34578999999999999999999864 68899999986543 33456788999999999999999999999999999999


Q ss_pred             eecCCCCChhhhhhcc-----CCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccc
Q 003786          550 YEYMPNKSLDFFLFDS-----TKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMA  624 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~-----~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla  624 (795)
                      |||+++++|.+++...     .....+++..+..++.||+.||.|||+.+   |+||||||+||+++.++.+||+|||++
T Consensus        92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~  168 (303)
T 2vwi_A           92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG---QIHRDVKAGNILLGEDGSVQIADFGVS  168 (303)
T ss_dssp             EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCHHH
T ss_pred             ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCCChhhEEEcCCCCEEEEeccch
Confidence            9999999999988531     12355899999999999999999999998   999999999999999999999999999


Q ss_pred             cccCCCcc---ccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCc
Q 003786          625 RIFGGDEL---QSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDD  700 (795)
Q Consensus       625 ~~~~~~~~---~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~  700 (795)
                      ........   ........||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...........  ........
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~--~~~~~~~~  246 (303)
T 2vwi_A          169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLML--TLQNDPPS  246 (303)
T ss_dssp             HHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHH--HHTSSCCC
T ss_pred             heeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHH--HhccCCCc
Confidence            86543211   112234578999999999876 5789999999999999999999999876543322111  00000000


Q ss_pred             ccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          701 RAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       701 ~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ......++..    .......+.+++.+||+.||++||++.|++++
T Consensus       247 ~~~~~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  288 (303)
T 2vwi_A          247 LETGVQDKEM----LKKYGKSFRKMISLCLQKDPEKRPTAAELLRH  288 (303)
T ss_dssp             TTC-----CC----CCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             cccccccchh----hhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence            0000011111    11223467889999999999999999999974

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=5.4e-39  Score=349.02  Aligned_cols=266  Identities=25%  Similarity=0.384  Sum_probs=195.0

Q ss_pred             HccCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHH--HHhcCCcccceeeeeeee-----cce
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKL--IAKLQHRNLVRLLGCCIE-----LEE  545 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~l~~~~~~-----~~~  545 (795)
                      ..++|++.+.||+|+||.||+|+. +++.||||++...   ....+..|.++  +..++||||+++++.+..     ...
T Consensus        11 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~   86 (336)
T 3g2f_A           11 DLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME   86 (336)
T ss_dssp             CTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred             ChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc---chhhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence            347899999999999999999976 6899999999643   23445555555  445899999999975432     335


Q ss_pred             eeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhc---------CCCcEEeccCCCCcEEECCCCCe
Q 003786          546 KILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY---------SRLRVIHRDLKASNILLDKDMNP  616 (795)
Q Consensus       546 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---------~~~~iiHrDikp~NIll~~~~~v  616 (795)
                      .++||||+++|+|.+++...    ..++..+..++.||++||.|||+.         +   |+||||||+|||++.++.+
T Consensus        87 ~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~---ivH~Dikp~Nill~~~~~~  159 (336)
T 3g2f_A           87 YLLVMEYYPNGSLXKYLSLH----TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA---ISHRDLNSRNVLVKNDGTC  159 (336)
T ss_dssp             EEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC---EECSSCSGGGEEECTTSCE
T ss_pred             EEEEEecCCCCcHHHHHhhc----ccchhHHHHHHHHHHHHHHHHHhhhccccccccc---eeecccccceEEEcCCCcE
Confidence            68999999999999998432    347889999999999999999998         6   9999999999999999999


Q ss_pred             eeeccccccccCCCcc------ccccccccccccccccccccc-------CCCCcccchhhHHHHHHHHHhCCCCCCCCC
Q 003786          617 KISDFGMARIFGGDEL------QSKTKRIVGTYGYMSPEYAQQ-------GLFSIKSDVFSFGVLLLETLSSKRNTDFSN  683 (795)
Q Consensus       617 kL~DFGla~~~~~~~~------~~~~~~~~gt~~y~APE~~~~-------~~~~~k~DvwSlGvil~elltG~~p~~~~~  683 (795)
                      ||+|||+++.......      ........||+.|+|||++.+       ..++.++|||||||++|||++|..|+....
T Consensus       160 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~  239 (336)
T 3g2f_A          160 VISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGE  239 (336)
T ss_dssp             EECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTS
T ss_pred             EEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCcc
Confidence            9999999987643221      112234579999999999876       456789999999999999999977764322


Q ss_pred             C-cchhH-hHh----------HhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcccc
Q 003786          684 T-NSLTL-LGH----------AWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKT  751 (795)
Q Consensus       684 ~-~~~~~-~~~----------~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~  751 (795)
                      . ..... ...          .............+....  ......+..+.+++.+||+.||++|||+.|+++.|+...
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll  317 (336)
T 3g2f_A          240 SVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAW--KENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELM  317 (336)
T ss_dssp             CCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTC--CCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             chhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCccc--ccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHH
Confidence            1 11100 000          000000000000011110  112235667899999999999999999999999987744

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=2.2e-39  Score=358.10  Aligned_cols=243  Identities=14%  Similarity=0.174  Sum_probs=188.5

Q ss_pred             ccCCccccccCcCCcccEEEeEe-cCcceEEEEEeccc---CccchHHHHHHH---HHHHhcCCcccceee-------ee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQ---SGQGQEEFKNEI---KLIAKLQHRNLVRLL-------GC  539 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~---~~l~~l~h~niv~l~-------~~  539 (795)
                      .++|++.+.||+|+||.||+|+. .+++.||||++...   .....+.+.+|+   ++|++++|||||+++       ++
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~  151 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  151 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence            46799999999999999999986 46899999999743   233457789999   455566899999998       55


Q ss_pred             eeecc-----------------eeeEEeecCCCCChhhhhhccCC----cccCChhhHHHHHHHHHHHHHHHHhcCCCcE
Q 003786          540 CIELE-----------------EKILIYEYMPNKSLDFFLFDSTK----ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRV  598 (795)
Q Consensus       540 ~~~~~-----------------~~~lv~E~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i  598 (795)
                      +...+                 ..++||||+ +|+|.+++.....    ...+++..+..++.||++||+|||+++   |
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---i  227 (377)
T 3byv_A          152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---L  227 (377)
T ss_dssp             EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT---E
T ss_pred             hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC---e
Confidence            44443                 278999999 6899999854321    122334788889999999999999998   9


Q ss_pred             EeccCCCCcEEECCCCCeeeeccccccccCCCcccccccccccccccccccccccC-----------CCCcccchhhHHH
Q 003786          599 IHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG-----------LFSIKSDVFSFGV  667 (795)
Q Consensus       599 iHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-----------~~~~k~DvwSlGv  667 (795)
                      +||||||+||||+.++.+||+|||+++....     ......| +.|+|||++.+.           .++.++|||||||
T Consensus       228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~  301 (377)
T 3byv_A          228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGL  301 (377)
T ss_dssp             ECSCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHH
T ss_pred             ecCCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHH
Confidence            9999999999999999999999999986432     2334567 999999999877           8999999999999


Q ss_pred             HHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          668 LLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       668 il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ++|||++|+.||..........              .+.. .     ....+..+.+++.+||+.||++|||+.|++++
T Consensus       302 il~elltg~~Pf~~~~~~~~~~--------------~~~~-~-----~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h  360 (377)
T 3byv_A          302 VIYWIWCADLPITKDAALGGSE--------------WIFR-S-----CKNIPQPVRALLEGFLRYPKEDRLLPLQAMET  360 (377)
T ss_dssp             HHHHHHHSSCCC------CCSG--------------GGGS-S-----CCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTS
T ss_pred             HHHHHHHCCCCCcccccccchh--------------hhhh-h-----ccCCCHHHHHHHHHHcCCCchhCCCHHHHhhC
Confidence            9999999999986543221100              0000 0     01123567889999999999999999999974

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=2.1e-38  Score=348.22  Aligned_cols=271  Identities=21%  Similarity=0.256  Sum_probs=199.9

Q ss_pred             cHHhHHHHccCCccccccCcCCcccEEEeEecCcceEEEEEecccCcc-----------chHHHHHHHHHHHhcCCcccc
Q 003786          466 SLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQ-----------GQEEFKNEIKLIAKLQHRNLV  534 (795)
Q Consensus       466 ~~~~i~~~~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv  534 (795)
                      ...++....++|++.+.||+|+||.||+|+..+++.||||++......           ..+.+.+|++++++++||||+
T Consensus        13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv   92 (362)
T 3pg1_A           13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL   92 (362)
T ss_dssp             HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence            345667778999999999999999999999888999999998653221           126789999999999999999


Q ss_pred             eeeeeeeec-----ceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEE
Q 003786          535 RLLGCCIEL-----EEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNIL  609 (795)
Q Consensus       535 ~l~~~~~~~-----~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIl  609 (795)
                      ++++++...     ...++||||++ ++|.+.+..  ....+++..+..++.||+.||.|||+.+   |+||||||+|||
T Consensus        93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl  166 (362)
T 3pg1_A           93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHD--QRIVISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNIL  166 (362)
T ss_dssp             CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHC--TTSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEE
T ss_pred             ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHCc---CEecCCChHHEE
Confidence            999998543     35799999998 577666643  3346899999999999999999999998   999999999999


Q ss_pred             ECCCCCeeeeccccccccCCCccccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchh
Q 003786          610 LDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLT  688 (795)
Q Consensus       610 l~~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~  688 (795)
                      ++.++.+||+|||++.......   ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||........ 
T Consensus       167 ~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-  242 (362)
T 3pg1_A          167 LADNNDITICDFNLAREDTADA---NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQ-  242 (362)
T ss_dssp             ECTTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-
T ss_pred             EcCCCCEEEEecCccccccccc---ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHH-
Confidence            9999999999999998543322   2334578999999998876 6799999999999999999999999976442211 


Q ss_pred             HhHhHhhhccCcc-----------ccccc-------CccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          689 LLGHAWDLWKDDR-----------AWELI-------DPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       689 ~~~~~~~~~~~~~-----------~~~~i-------d~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                       ............           ..+.+       ...............+.+++.+||+.||++|||+.|++++-
T Consensus       243 -~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp  318 (362)
T 3pg1_A          243 -LNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHP  318 (362)
T ss_dssp             -HHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred             -HHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCc
Confidence             111101000000           00000       00000111222345688999999999999999999999863

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=4.6e-38  Score=334.37  Aligned_cols=250  Identities=23%  Similarity=0.349  Sum_probs=198.8

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeee----cceee
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIE----LEEKI  547 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~  547 (795)
                      ..|++.+.||+|+||.||+|... ++..||+|++....  ....+.+.+|+.++++++||||+++++++..    ....+
T Consensus        26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  105 (290)
T 1t4h_A           26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV  105 (290)
T ss_dssp             CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred             eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence            45888899999999999999864 57889999986542  3345678999999999999999999999875    35689


Q ss_pred             EEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEEC-CCCCeeeeccccccc
Q 003786          548 LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLD-KDMNPKISDFGMARI  626 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~-~~~~vkL~DFGla~~  626 (795)
                      +||||+++++|.+++..   ...+++..+..++.||+.||.|||+.+ .+|+||||||+|||++ .++.+||+|||++..
T Consensus       106 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~  181 (290)
T 1t4h_A          106 LVTELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATL  181 (290)
T ss_dssp             EEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred             EEEEecCCCCHHHHHHH---ccCCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence            99999999999999843   345889999999999999999999874 3499999999999997 789999999999976


Q ss_pred             cCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCccccccc
Q 003786          627 FGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELI  706 (795)
Q Consensus       627 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i  706 (795)
                      .....    .....||+.|+|||++.+ .++.++|||||||++|+|++|+.||........... .    .......   
T Consensus       182 ~~~~~----~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~-~----~~~~~~~---  248 (290)
T 1t4h_A          182 KRASF----AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYR-R----VTSGVKP---  248 (290)
T ss_dssp             CCTTS----BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHH-H----HTTTCCC---
T ss_pred             ccccc----cccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHH-H----HhccCCc---
Confidence            54332    234579999999998874 589999999999999999999999975433222111 1    1111110   


Q ss_pred             CccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          707 DPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       707 d~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                           ...+......+.+++.+||+.||++|||+.|++++
T Consensus       249 -----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  283 (290)
T 1t4h_A          249 -----ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH  283 (290)
T ss_dssp             -----GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             -----cccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence                 01111123467899999999999999999999985

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=2.3e-38  Score=338.58  Aligned_cols=254  Identities=23%  Similarity=0.370  Sum_probs=199.9

Q ss_pred             HccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      ..++|++.+.||+|+||.||+|+.. +++.||+|++........+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus        17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   96 (302)
T 2j7t_A           17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE   96 (302)
T ss_dssp             GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred             CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence            3478999999999999999999875 488999999987766677889999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      |+++++|..++...  ...+++..+..++.||++||.|||+.+   |+||||||+||+++.++.+||+|||++...... 
T Consensus        97 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-  170 (302)
T 2j7t_A           97 FCPGGAVDAIMLEL--DRGLTEPQIQVVCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT-  170 (302)
T ss_dssp             CCTTEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH-
T ss_pred             eCCCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEECCCCCEEEEECCCCcccccc-
Confidence            99999999888542  245889999999999999999999998   999999999999999999999999997643211 


Q ss_pred             cccccccccccccccccccc-----ccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCccccccc
Q 003786          632 LQSKTKRIVGTYGYMSPEYA-----QQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELI  706 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~-----~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i  706 (795)
                       ........||+.|+|||++     ....++.++||||||+++|+|++|..|+........  ....   ..... ... 
T Consensus       171 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~~---~~~~~-~~~-  242 (302)
T 2j7t_A          171 -LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV--LLKI---AKSDP-PTL-  242 (302)
T ss_dssp             -HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH--HHHH---HHSCC-CCC-
T ss_pred             -ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHH--HHHH---hccCC-ccc-
Confidence             1112335789999999988     466789999999999999999999999875432211  1110   00100 000 


Q ss_pred             CccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          707 DPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       707 d~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                            ..+...+..+.+++.+||+.||++|||+.+++++
T Consensus       243 ------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  276 (302)
T 2j7t_A          243 ------LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH  276 (302)
T ss_dssp             ------SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred             ------CCccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence                  0112234567899999999999999999999874

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=3.9e-38  Score=343.91  Aligned_cols=263  Identities=23%  Similarity=0.342  Sum_probs=205.5

Q ss_pred             ccCCccccccCcCCcccEEEeEecCcceEEEEEecccCccc-----------------hHHHHHHHHHHHhcCCccccee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQG-----------------QEEFKNEIKLIAKLQHRNLVRL  536 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~h~niv~l  536 (795)
                      .++|++.+.||+|+||.||+|+. +++.||||++.......                 .+.+.+|+.++++++||||+++
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~  108 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC  108 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence            47899999999999999999998 89999999986542211                 1789999999999999999999


Q ss_pred             eeeeeecceeeEEeecCCCCChhhh------hhccCCcccCChhhHHHHHHHHHHHHHHHHh-cCCCcEEeccCCCCcEE
Q 003786          537 LGCCIELEEKILIYEYMPNKSLDFF------LFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ-YSRLRVIHRDLKASNIL  609 (795)
Q Consensus       537 ~~~~~~~~~~~lv~E~~~~gsL~~~------l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~iiHrDikp~NIl  609 (795)
                      ++++.+.+..++||||+++++|.++      +.. .....+++..+..++.||+.||.|||+ .+   |+||||||+||+
T Consensus       109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~-~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dl~p~Nil  184 (348)
T 2pml_X          109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDK-NYTCFIPIQVIKCIIKSVLNSFSYIHNEKN---ICHRDVKPSNIL  184 (348)
T ss_dssp             SEEEESSSEEEEEEECCTTCBSSEESSSEESSCS-SSCCCCCHHHHHHHHHHHHHHHHHHHHTSC---EECCCCCGGGEE
T ss_pred             EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhh-ccccCCCHHHHHHHHHHHHHHHHHHhccCC---EeecCCChHhEE
Confidence            9999999999999999999999988      422 224668999999999999999999999 87   999999999999


Q ss_pred             ECCCCCeeeeccccccccCCCcccccccccccccccccccccccC-CCCc-ccchhhHHHHHHHHHhCCCCCCCCCCcch
Q 003786          610 LDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG-LFSI-KSDVFSFGVLLLETLSSKRNTDFSNTNSL  687 (795)
Q Consensus       610 l~~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~-k~DvwSlGvil~elltG~~p~~~~~~~~~  687 (795)
                      ++.++.+||+|||++......    ......|++.|+|||++.+. .++. ++|||||||++|||++|..||........
T Consensus       185 ~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~  260 (348)
T 2pml_X          185 MDKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVE  260 (348)
T ss_dssp             ECTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHH
T ss_pred             EcCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHH
Confidence            999999999999999876433    23446799999999999877 6766 99999999999999999999976543221


Q ss_pred             hHhHhHhhh-ccCcc-cccccCc---cccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          688 TLLGHAWDL-WKDDR-AWELIDP---TLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       688 ~~~~~~~~~-~~~~~-~~~~id~---~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                       ........ ..... ......+   ..........+..+.+++.+||+.||++||++.|++++
T Consensus       261 -~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h  323 (348)
T 2pml_X          261 -LFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH  323 (348)
T ss_dssp             -HHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             -HHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence             11111000 00000 0000000   00011112344678899999999999999999999985

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=4.4e-38  Score=345.22  Aligned_cols=270  Identities=19%  Similarity=0.228  Sum_probs=192.3

Q ss_pred             hHHHHccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecce--
Q 003786          469 SVSAATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEE--  545 (795)
Q Consensus       469 ~i~~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--  545 (795)
                      ......++|++.+.||+|+||.||+|+.. +++.||||++... ......+.+|++.+..++||||+++++++.....  
T Consensus        17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~   95 (360)
T 3e3p_A           17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQD-PRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD   95 (360)
T ss_dssp             HHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECC-TTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred             hchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecC-ccccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence            34566789999999999999999999875 5899999998543 2334567788899999999999999999976544  


Q ss_pred             -----eeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHH--hcCCCcEEeccCCCCcEEECC-CCCee
Q 003786          546 -----KILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH--QYSRLRVIHRDLKASNILLDK-DMNPK  617 (795)
Q Consensus       546 -----~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH--~~~~~~iiHrDikp~NIll~~-~~~vk  617 (795)
                           .++||||++++.+..+.........+++..+..++.||+.||.|||  +.+   |+||||||+|||++. ++.+|
T Consensus        96 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~---ivH~Dlkp~NIll~~~~~~~k  172 (360)
T 3e3p_A           96 RRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN---VCHRDIKPHNVLVNEADGTLK  172 (360)
T ss_dssp             TTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC---CBCSCCCGGGEEEETTTTEEE
T ss_pred             ccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC---eecCcCCHHHEEEeCCCCcEE
Confidence                 7899999997544433322234556888999999999999999999  777   999999999999997 89999


Q ss_pred             eeccccccccCCCcccccccccccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhh
Q 003786          618 ISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG-LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDL  696 (795)
Q Consensus       618 L~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~  696 (795)
                      |+|||+++......   ......||+.|+|||++.+. .++.++|||||||++|||++|+.||.........  ......
T Consensus       173 l~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~--~~~~~~  247 (360)
T 3e3p_A          173 LCDFGSAKKLSPSE---PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQL--HEIVRV  247 (360)
T ss_dssp             ECCCTTCBCCCTTS---CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH--HHHHHH
T ss_pred             EeeCCCceecCCCC---CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHH--HHHHHH
Confidence            99999998765433   22345789999999988654 5899999999999999999999999765422211  111000


Q ss_pred             ccCc--ccccccCcc----------------ccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          697 WKDD--RAWELIDPT----------------LQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       697 ~~~~--~~~~~id~~----------------l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                      ....  .....+++.                ............+.+++.+||+.||++|||+.|++++-
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp  316 (360)
T 3e3p_A          248 LGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHP  316 (360)
T ss_dssp             HCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSG
T ss_pred             cCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCc
Confidence            0000  000000000                00011112456788999999999999999999999874

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=1.6e-37  Score=332.40  Aligned_cols=252  Identities=21%  Similarity=0.255  Sum_probs=198.8

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC----ccchHHHHHHHHHHHhcCCcccceeeeeee--eccee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS----GQGQEEFKNEIKLIAKLQHRNLVRLLGCCI--ELEEK  546 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~  546 (795)
                      .++|++.+.||+|+||.||+++.. +++.||||++....    ....+.+.+|++++++++||||+++++++.  +....
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM   83 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence            478999999999999999999864 58899999997542    234578999999999999999999999984  45678


Q ss_pred             eEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          547 ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                      ++||||++++ |.+++... ....+++..+..++.||++||.|||+++   |+||||||+||+++.++.+||+|||++..
T Consensus        84 ~lv~e~~~~~-l~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~NIl~~~~~~~kl~dfg~~~~  158 (305)
T 2wtk_C           84 YMVMEYCVCG-MQEMLDSV-PEKRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEA  158 (305)
T ss_dssp             EEEEECCSEE-HHHHHHHS-TTCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEEehhccCC-HHHHHHhC-cccccCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEcCCCcEEeeccccccc
Confidence            9999999987 55555432 3456889999999999999999999998   99999999999999999999999999987


Q ss_pred             cCCCcccccccccccccccccccccccCC--CCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCccccc
Q 003786          627 FGGDELQSKTKRIVGTYGYMSPEYAQQGL--FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWE  704 (795)
Q Consensus       627 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~--~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  704 (795)
                      ..............||+.|+|||++.+..  ++.++||||||+++|||++|+.||........  ....    .....  
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~i----~~~~~--  230 (305)
T 2wtk_C          159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKL--FENI----GKGSY--  230 (305)
T ss_dssp             CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHH----HHCCC--
T ss_pred             cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHH--HHHH----hcCCC--
Confidence            65433333334567999999999987643  47899999999999999999999875432111  1110    00100  


Q ss_pred             ccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          705 LIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       705 ~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                          .    .+......+.+++.+||+.||++|||+.|++++
T Consensus       231 ----~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  264 (305)
T 2wtk_C          231 ----A----IPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH  264 (305)
T ss_dssp             ----C----CCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             ----C----CCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence                0    111223467789999999999999999999986

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=5.6e-38  Score=346.08  Aligned_cols=260  Identities=22%  Similarity=0.227  Sum_probs=193.4

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecc------
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELE------  544 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------  544 (795)
                      .++|++.+.||+|+||.||+|+.. +++.||||++....  ....+.+.+|+.+++.++||||+++++++....      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~  103 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  103 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence            478999999999999999999864 58899999996532  233467889999999999999999999987665      


Q ss_pred             eeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccc
Q 003786          545 EKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMA  624 (795)
Q Consensus       545 ~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla  624 (795)
                      ..++||||+++ +|.+.+.     ..+++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||++
T Consensus       104 ~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a  174 (371)
T 2xrw_A          104 DVYIVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA  174 (371)
T ss_dssp             EEEEEEECCSE-EHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCCC-
T ss_pred             ceEEEEEcCCC-CHHHHHh-----hccCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEEEeecc
Confidence            67999999985 6766663     23788999999999999999999998   999999999999999999999999999


Q ss_pred             cccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhcc------
Q 003786          625 RIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWK------  698 (795)
Q Consensus       625 ~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~------  698 (795)
                      +......   ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+....  .........      
T Consensus       175 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~i~~~~~~~~~~~  249 (371)
T 2xrw_A          175 RTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ--WNKVIEQLGTPCPEF  249 (371)
T ss_dssp             ------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHC-CCCCCHHH
T ss_pred             ccccccc---ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhCCCCHHH
Confidence            8654322   22346799999999999999999999999999999999999999976542211  100000000      


Q ss_pred             -------------Ccc------cccccCcc---ccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          699 -------------DDR------AWELIDPT---LQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       699 -------------~~~------~~~~id~~---l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                                   ...      ....+...   ............+.+++.+||+.||++|||++|++++-
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp  320 (371)
T 2xrw_A          250 MKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP  320 (371)
T ss_dssp             HTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred             HHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCc
Confidence                         000      00000000   01112234467789999999999999999999999963

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=8.8e-38  Score=336.06  Aligned_cols=252  Identities=25%  Similarity=0.389  Sum_probs=200.8

Q ss_pred             HccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      ..++|++.+.||+|+||.||+|+.. +++.||||++...  ...+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE--SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME  104 (314)
T ss_dssp             ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETT--SCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCch--HHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence            4578999999999999999999875 4899999999654  345789999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      |+++++|.+++..  ....+++..+..++.||+.||.|||+.+   |+|+||||+||+++.++.+||+|||++.......
T Consensus       105 ~~~~~~L~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~  179 (314)
T 3com_A          105 YCGAGSVSDIIRL--RNKTLTEDEIATILQSTLKGLEYLHFMR---KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM  179 (314)
T ss_dssp             CCTTEEHHHHHHH--HTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECBTTB
T ss_pred             cCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCcCHHHEEECCCCCEEEeecccchhhhhhc
Confidence            9999999998852  2345889999999999999999999998   9999999999999999999999999998764332


Q ss_pred             ccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcccc
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQ  711 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~  711 (795)
                        .......|++.|+|||++.+..++.++||||||+++|+|++|..||..........  ..   ... ..     +.+ 
T Consensus       180 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~--~~---~~~-~~-----~~~-  245 (314)
T 3com_A          180 --AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIF--MI---PTN-PP-----PTF-  245 (314)
T ss_dssp             --SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH--HH---HHS-CC-----CCC-
T ss_pred             --cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHH--HH---hcC-CC-----ccc-
Confidence              12334578999999999999999999999999999999999999986543211110  00   000 00     000 


Q ss_pred             chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          712 NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       712 ~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                       ..+...+..+.+++.+||+.||++|||+.+++++
T Consensus       246 -~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~  279 (314)
T 3com_A          246 -RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQH  279 (314)
T ss_dssp             -SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             -CCcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence             0111234567899999999999999999999885

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=1.3e-38  Score=338.35  Aligned_cols=258  Identities=28%  Similarity=0.377  Sum_probs=196.8

Q ss_pred             ccCCccccccCcCCcccEEEeEec--Cc--ceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeeccee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL--NG--QEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEK  546 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~--~~--~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  546 (795)
                      .++|++.+.||+|+||.||+|++.  ++  ..||||++....   ....+.+.+|++++++++||||+++++++.+.. .
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~   95 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M   95 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence            467999999999999999999853  23  368999986542   234567899999999999999999999988765 8


Q ss_pred             eEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          547 ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                      ++||||+++++|.+++...  ...+++..+..++.||++||.|||+++   |+||||||+||+++.++.+||+|||++..
T Consensus        96 ~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~  170 (291)
T 1u46_A           96 KMVTELAPLGSLLDRLRKH--QGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRA  170 (291)
T ss_dssp             EEEEECCTTCBHHHHHHHH--GGGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred             eeeEecccCCCHHHHHHhc--cCCcCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEEcCCCCEEEcccccccc
Confidence            8999999999999988543  345889999999999999999999998   99999999999999999999999999987


Q ss_pred             cCCCccc-ccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCccccc
Q 003786          627 FGGDELQ-SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWE  704 (795)
Q Consensus       627 ~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  704 (795)
                      ....... .......+|+.|+|||++.+..++.++||||||+++|+|++ |+.||........  ....   ....... 
T Consensus       171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~--~~~~---~~~~~~~-  244 (291)
T 1u46_A          171 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI--LHKI---DKEGERL-  244 (291)
T ss_dssp             CCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH--HHHH---HTSCCCC-
T ss_pred             ccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHH--HHHH---HccCCCC-
Confidence            6543221 12233567889999999998889999999999999999999 9999865432211  1111   1111100 


Q ss_pred             ccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcccc
Q 003786          705 LIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKT  751 (795)
Q Consensus       705 ~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~  751 (795)
                              ..+...+..+.+++.+||+.+|++||++.+++++|....
T Consensus       245 --------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  283 (291)
T 1u46_A          245 --------PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ  283 (291)
T ss_dssp             --------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             --------CCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhC
Confidence                    111223457889999999999999999999999998743

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=3.5e-38  Score=353.34  Aligned_cols=261  Identities=23%  Similarity=0.280  Sum_probs=194.7

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeec------cee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL------EEK  546 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~  546 (795)
                      ..+|++.+.||+|+||.||+|++. +++.||||++....    ....+|+++|++++|||||++++++...      ...
T Consensus        53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~  128 (420)
T 1j1b_A           53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL  128 (420)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEE
T ss_pred             cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeE
Confidence            346999999999999999999875 58999999986432    2345799999999999999999998643      236


Q ss_pred             eEEeecCCCCChhhhhhc-cCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCC-CCeeeeccccc
Q 003786          547 ILIYEYMPNKSLDFFLFD-STKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKD-MNPKISDFGMA  624 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~-~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~-~~vkL~DFGla  624 (795)
                      ++||||+++ +|...+.. ......+++..+..++.||++||.|||+++   |+||||||+||||+.+ +.+||+|||++
T Consensus       129 ~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NILl~~~~~~~kl~DFG~a  204 (420)
T 1j1b_A          129 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSA  204 (420)
T ss_dssp             EEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred             Eeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChhhEEEeCCCCeEEeccchhh
Confidence            789999987 44444422 223456899999999999999999999988   9999999999999965 56899999999


Q ss_pred             cccCCCcccccccccccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccC----
Q 003786          625 RIFGGDELQSKTKRIVGTYGYMSPEYAQQG-LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKD----  699 (795)
Q Consensus       625 ~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~----  699 (795)
                      +......   ......||+.|+|||++.+. .++.++|||||||++|||++|+.||........ +.... .....    
T Consensus       205 ~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~-l~~i~-~~lg~p~~~  279 (420)
T 1j1b_A          205 KQLVRGE---PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ-LVEII-KVLGTPTRE  279 (420)
T ss_dssp             EECCTTC---CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHH-HHHCSCCHH
T ss_pred             hhcccCC---CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHH-HHhCCCCHH
Confidence            8764332   12335789999999998764 799999999999999999999999976542221 11111 10000    


Q ss_pred             ------cccccccCccccc-----hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          700 ------DRAWELIDPTLQN-----EASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       700 ------~~~~~~id~~l~~-----~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                            ....+...+.+..     .........+.+|+.+||+.||++||++.|+++|-
T Consensus       280 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp  338 (420)
T 1j1b_A          280 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS  338 (420)
T ss_dssp             HHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred             HHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCH
Confidence                  0000111111111     01122346788999999999999999999999864

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=7e-39  Score=340.35  Aligned_cols=254  Identities=25%  Similarity=0.321  Sum_probs=188.2

Q ss_pred             HccCCccccccCcCCcccEEEeEe-cCcceEEEEEecccCcc--chHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQ--GQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      ..++|++.+.||+|+||.||+|+. .+++.||||++......  ..+.+.++...++.++||||+++++++.+.+..++|
T Consensus         5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv   84 (290)
T 3fme_A            5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC   84 (290)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred             cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence            457899999999999999999986 46899999999754222  223345555668888999999999999999999999


Q ss_pred             eecCCCCChhhhhhcc-CCcccCChhhHHHHHHHHHHHHHHHHhc-CCCcEEeccCCCCcEEECCCCCeeeecccccccc
Q 003786          550 YEYMPNKSLDFFLFDS-TKENLLGWGTRVRIIEGIAQGLLYLHQY-SRLRVIHRDLKASNILLDKDMNPKISDFGMARIF  627 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~  627 (795)
                      |||+++ +|.+++... .....+++..+..++.||+.||.|||++ +   |+||||||+||+++.++.+||+|||++...
T Consensus        85 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  160 (290)
T 3fme_A           85 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYL  160 (290)
T ss_dssp             EECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC---CCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred             Eehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence            999985 777666432 2345689999999999999999999998 7   999999999999999999999999999876


Q ss_pred             CCCccccccccccccccccccccc----ccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccc
Q 003786          628 GGDELQSKTKRIVGTYGYMSPEYA----QQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAW  703 (795)
Q Consensus       628 ~~~~~~~~~~~~~gt~~y~APE~~----~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~  703 (795)
                      ....   ......||+.|+|||++    .+..++.++|||||||++|+|++|+.||+.............    .... .
T Consensus       161 ~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~----~~~~-~  232 (290)
T 3fme_A          161 VDDV---AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVV----EEPS-P  232 (290)
T ss_dssp             ------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHH----HSCC-C
T ss_pred             cccc---cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHh----ccCC-C
Confidence            4332   22334799999999996    566789999999999999999999999975433322221111    1110 0


Q ss_pred             cccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          704 ELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       704 ~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ..        .....+..+.+++.+||+.||++|||+.|++++
T Consensus       233 ~~--------~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h  267 (290)
T 3fme_A          233 QL--------PADKFSAEFVDFTSQCLKKNSKERPTYPELMQH  267 (290)
T ss_dssp             CC--------CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             Cc--------ccccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence            00        111234567899999999999999999999884

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=7.2e-38  Score=338.26  Aligned_cols=253  Identities=22%  Similarity=0.268  Sum_probs=197.5

Q ss_pred             HccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCc--------cchHHHHHHHHHHHhcCCcccceeeeeeeec
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG--------QGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL  543 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  543 (795)
                      ..++|++.+.||+|+||.||+|+.. +++.||||++.....        .....+.+|+++|++++||||+++++++...
T Consensus         8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   87 (322)
T 2ycf_A            8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE   87 (322)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred             hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence            3467999999999999999999865 588999999865321        2234688999999999999999999998765


Q ss_pred             ceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCC---eeeec
Q 003786          544 EEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMN---PKISD  620 (795)
Q Consensus       544 ~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~---vkL~D  620 (795)
                      . .++||||+++++|.+++.   ....+++..+..++.||+.||.|||+++   |+||||||+|||++.++.   +||+|
T Consensus        88 ~-~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~D  160 (322)
T 2ycf_A           88 D-YYIVLELMEGGELFDKVV---GNKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITD  160 (322)
T ss_dssp             S-EEEEEECCTTEETHHHHS---TTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSSSCCEEECC
T ss_pred             c-eEEEEecCCCCcHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEecCCCCCeEEEcc
Confidence            4 899999999999998884   3346889999999999999999999998   999999999999987664   99999


Q ss_pred             cccccccCCCcccccccccccccccccccccc---cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhc
Q 003786          621 FGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ---QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLW  697 (795)
Q Consensus       621 FGla~~~~~~~~~~~~~~~~gt~~y~APE~~~---~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~  697 (795)
                      ||++.......   ......||+.|+|||++.   ...++.++|||||||++|+|++|..||......... .....   
T Consensus       161 fg~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~~~---  233 (322)
T 2ycf_A          161 FGHSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL-KDQIT---  233 (322)
T ss_dssp             CTTCEECCCCH---HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCH-HHHHH---
T ss_pred             Cccceeccccc---ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHH-HHHHH---
Confidence            99998764332   223457899999999874   567899999999999999999999999754432211 11000   


Q ss_pred             cCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          698 KDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       698 ~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                       ....      .............+.+++.+||+.||++||++.|++++
T Consensus       234 -~~~~------~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h  275 (322)
T 2ycf_A          234 -SGKY------NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH  275 (322)
T ss_dssp             -HTCC------CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             -hCcc------ccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence             0000      00011112234678899999999999999999999874

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=2.7e-38  Score=350.16  Aligned_cols=262  Identities=19%  Similarity=0.235  Sum_probs=197.0

Q ss_pred             HHccCCccccccCcCCcccEEEeEe-cCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeec-------
Q 003786          472 AATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL-------  543 (795)
Q Consensus       472 ~~~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-------  543 (795)
                      ...++|++.+.||+|+||.||+|+. .+++.||||++....    ....+|+++|+.++||||+++++++...       
T Consensus         4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~   79 (383)
T 3eb0_A            4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP   79 (383)
T ss_dssp             --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred             cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence            4567899999999999999999986 468999999986432    2345799999999999999999998543       


Q ss_pred             -------------------------------ceeeEEeecCCCCChhhhhhcc-CCcccCChhhHHHHHHHHHHHHHHHH
Q 003786          544 -------------------------------EEKILIYEYMPNKSLDFFLFDS-TKENLLGWGTRVRIIEGIAQGLLYLH  591 (795)
Q Consensus       544 -------------------------------~~~~lv~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH  591 (795)
                                                     ...++||||+++ +|.+.+... .....+++..+..++.||++||.|||
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH  158 (383)
T 3eb0_A           80 PQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH  158 (383)
T ss_dssp             ------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence                                           337899999995 776666432 23456899999999999999999999


Q ss_pred             hcCCCcEEeccCCCCcEEEC-CCCCeeeeccccccccCCCcccccccccccccccccccccccC-CCCcccchhhHHHHH
Q 003786          592 QYSRLRVIHRDLKASNILLD-KDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG-LFSIKSDVFSFGVLL  669 (795)
Q Consensus       592 ~~~~~~iiHrDikp~NIll~-~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil  669 (795)
                      +.+   |+||||||+|||++ .++.+||+|||+++......   ......||+.|+|||++.+. .++.++|||||||++
T Consensus       159 ~~g---i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il  232 (383)
T 3eb0_A          159 SLG---ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE---PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVF  232 (383)
T ss_dssp             TTT---EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS---CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred             HCc---CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC---CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHH
Confidence            988   99999999999997 68899999999998764333   22345789999999988764 599999999999999


Q ss_pred             HHHHhCCCCCCCCCCcchhHhHhHhhhcc---------------CcccccccCccccchhhHHHHHHHHHHHHhhccCCC
Q 003786          670 LETLSSKRNTDFSNTNSLTLLGHAWDLWK---------------DDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDA  734 (795)
Q Consensus       670 ~elltG~~p~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP  734 (795)
                      |||++|+.||.........  ........               ................+...+..+.+++.+||+.||
T Consensus       233 ~ell~g~~pf~~~~~~~~~--~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  310 (383)
T 3eb0_A          233 GELILGKPLFSGETSIDQL--VRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEP  310 (383)
T ss_dssp             HHHHHSSCSSCCSSHHHHH--HHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSG
T ss_pred             HHHHhCCCCCCCCChHHHH--HHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCCh
Confidence            9999999999765422211  11100000               000000111111111222344568899999999999


Q ss_pred             CCCCCHHHHHHH
Q 003786          735 ADRPTMFEVVSM  746 (795)
Q Consensus       735 ~~RPt~~evl~~  746 (795)
                      ++|||+.|++++
T Consensus       311 ~~R~t~~e~l~h  322 (383)
T 3eb0_A          311 DLRINPYEAMAH  322 (383)
T ss_dssp             GGSCCHHHHHTS
T ss_pred             hhCCCHHHHhcC
Confidence            999999999985

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=1.5e-38  Score=373.30  Aligned_cols=247  Identities=27%  Similarity=0.389  Sum_probs=196.3

Q ss_pred             cccCcCCcccEEEeEec---CcceEEEEEecccCc--cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCCC
Q 003786          481 NKLGEGGFGPVYKGRLL---NGQEVAVKRLSSQSG--QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPN  555 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~  555 (795)
                      ++||+|+||.||+|.+.   .++.||||++.....  ...+++.+|+++|++++|||||++++++. .+..++||||+++
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~  453 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL  453 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCC
Confidence            57999999999999643   467899999976432  33578999999999999999999999986 4568899999999


Q ss_pred             CChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc-cc
Q 003786          556 KSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL-QS  634 (795)
Q Consensus       556 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~-~~  634 (795)
                      |+|.+++..   ...+++..+..++.||+.||.|||+++   |+||||||+||||+.++.+||+|||+++.+..... ..
T Consensus       454 g~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~yLH~~~---iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~  527 (635)
T 4fl3_A          454 GPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK  527 (635)
T ss_dssp             EEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC------
T ss_pred             CCHHHHHhh---CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccc
Confidence            999999943   345889999999999999999999998   99999999999999999999999999987654322 12


Q ss_pred             cccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCccccch
Q 003786          635 KTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNE  713 (795)
Q Consensus       635 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~  713 (795)
                      ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||........  ...    .....         ...
T Consensus       528 ~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~--~~~----i~~~~---------~~~  592 (635)
T 4fl3_A          528 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV--TAM----LEKGE---------RMG  592 (635)
T ss_dssp             -------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH--HHH----HHTTC---------CCC
T ss_pred             cccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH--HHH----HHcCC---------CCC
Confidence            2233456889999999999999999999999999999998 9999876443221  111    11111         111


Q ss_pred             hhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          714 ASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       714 ~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      .+..++..+.+++.+||+.||++||++.+|+++|+.
T Consensus       593 ~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~  628 (635)
T 4fl3_A          593 CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN  628 (635)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            122344678899999999999999999999999875

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=1.1e-38  Score=343.16  Aligned_cols=262  Identities=24%  Similarity=0.297  Sum_probs=200.2

Q ss_pred             ccHHhHHHHccCCccccccCcCCcccEEEeEecCcceEEEEEecccC--ccchHHHHHHHHHHHhcC--Ccccceeeeee
Q 003786          465 FSLASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQ--HRNLVRLLGCC  540 (795)
Q Consensus       465 ~~~~~i~~~~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~--h~niv~l~~~~  540 (795)
                      +.+.++....++|++.+.||+|+||.||+++..+++.||||++....  ....+.+.+|++++++++  ||||+++++++
T Consensus        18 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~   97 (313)
T 3cek_A           18 LYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE   97 (313)
T ss_dssp             --CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEE
T ss_pred             CCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEe
Confidence            34445556678899999999999999999998889999999986542  234577899999999997  59999999999


Q ss_pred             eecceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeec
Q 003786          541 IELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISD  620 (795)
Q Consensus       541 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~D  620 (795)
                      .+.+..++||| +.+++|.+++..   ...+++..+..++.||++||.|||+++   |+||||||+|||++ ++.+||+|
T Consensus        98 ~~~~~~~lv~e-~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~-~~~~kL~D  169 (313)
T 3cek_A           98 ITDQYIYMVME-CGNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLID  169 (313)
T ss_dssp             ECSSEEEEEEC-CCSEEHHHHHHH---CSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE-TTEEEECC
T ss_pred             ecCCEEEEEEe-cCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEEE-CCeEEEee
Confidence            99999999999 678899999854   345888999999999999999999998   99999999999996 48999999


Q ss_pred             cccccccCCCccccccccccccccccccccccc-----------CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhH
Q 003786          621 FGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQ-----------GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTL  689 (795)
Q Consensus       621 FGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~-----------~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~  689 (795)
                      ||++................||+.|+|||++.+           ..++.++|||||||++|||++|+.||..........
T Consensus       170 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~  249 (313)
T 3cek_A          170 FGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL  249 (313)
T ss_dssp             CSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHH
T ss_pred             ccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHH
Confidence            999987654332223344679999999999865           478899999999999999999999986543221111


Q ss_pred             hHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          690 LGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       690 ~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                      .    ......         .....+......+.+++.+||+.||++||++.|++++.
T Consensus       250 ~----~~~~~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~  294 (313)
T 3cek_A          250 H----AIIDPN---------HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP  294 (313)
T ss_dssp             H----HHHCTT---------SCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred             H----HHHhcc---------cccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence            1    111111         11111111234678899999999999999999999864

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=3.2e-38  Score=347.11  Aligned_cols=260  Identities=23%  Similarity=0.276  Sum_probs=185.0

Q ss_pred             HccCCccccccCcCCcccEEEeEe-cCcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeec------
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL------  543 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------  543 (795)
                      ..++|++.+.||+|+||.||+|+. .+|+.||||++....  ....+.+.+|+.+|+.++||||+++++++...      
T Consensus        27 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~  106 (367)
T 2fst_X           27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF  106 (367)
T ss_dssp             EETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred             CCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence            347899999999999999999985 468999999996532  23456788999999999999999999998754      


Q ss_pred             ceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccc
Q 003786          544 EEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGM  623 (795)
Q Consensus       544 ~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGl  623 (795)
                      ...++|+|++ +++|.+++..    ..+++..+..++.||++||.|||+.+   |+||||||+|||++.++.+||+|||+
T Consensus       107 ~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kL~DFG~  178 (367)
T 2fst_X          107 NDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGL  178 (367)
T ss_dssp             CCCEEEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC---
T ss_pred             CeEEEEeccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHhhEEECCCCCEEEeeccc
Confidence            5679999998 6888888743    45899999999999999999999998   99999999999999999999999999


Q ss_pred             ccccCCCccccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCc--
Q 003786          624 ARIFGGDELQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDD--  700 (795)
Q Consensus       624 a~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~--  700 (795)
                      ++.....     .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...+....  +..........  
T Consensus       179 a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--l~~i~~~~g~p~~  251 (367)
T 2fst_X          179 ARHTADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ--LKLILRLVGTPGA  251 (367)
T ss_dssp             -----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHHHCSCCH
T ss_pred             ccccccc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhCCCCH
Confidence            9865422     234679999999999877 6899999999999999999999999976542221  11110100000  


Q ss_pred             ---------cccccc---Ccccc---chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          701 ---------RAWELI---DPTLQ---NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       701 ---------~~~~~i---d~~l~---~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                               .....+   ...-.   ..........+.+|+.+||+.||++|||+.|++++-
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp  313 (367)
T 2fst_X          252 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA  313 (367)
T ss_dssp             HHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred             HHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcCh
Confidence                     000000   00000   001112245678999999999999999999999974

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=9.2e-38  Score=347.05  Aligned_cols=262  Identities=21%  Similarity=0.219  Sum_probs=200.7

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcC--------Ccccceeeeeee---
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQ--------HRNLVRLLGCCI---  541 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~~---  541 (795)
                      .++|++.++||+|+||.||+|+.. +++.||||++... ....+.+.+|+.+|++++        |+||+++++++.   
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~  114 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG  114 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence            478999999999999999999864 5889999999643 334567889999999996        788999999988   


Q ss_pred             -ecceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhc-CCCcEEeccCCCCcEEECCCC-----
Q 003786          542 -ELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY-SRLRVIHRDLKASNILLDKDM-----  614 (795)
Q Consensus       542 -~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~~~iiHrDikp~NIll~~~~-----  614 (795)
                       +....++||||+.+ +|.+.+... ....+++..+..++.||++||.|||++ +   |+||||||+||||+.++     
T Consensus       115 ~~~~~~~lv~e~~~~-~l~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH~~~g---ivHrDikp~NIll~~~~~~~~~  189 (397)
T 1wak_A          115 VNGTHICMVFEVLGH-HLLKWIIKS-NYQGLPLPCVKKIIQQVLQGLDYLHTKCR---IIHTDIKPENILLSVNEQYIRR  189 (397)
T ss_dssp             TTEEEEEEEECCCCC-BHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECCCCSGGGEEECCCHHHHHH
T ss_pred             CCCceEEEEEeccCc-cHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHeeEeccchhhhh
Confidence             56688999999955 554444332 224588999999999999999999998 7   99999999999999775     


Q ss_pred             --------------------------------------------CeeeeccccccccCCCcccccccccccccccccccc
Q 003786          615 --------------------------------------------NPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEY  650 (795)
Q Consensus       615 --------------------------------------------~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~  650 (795)
                                                                  .+||+|||++......     .....||+.|+|||+
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aPE~  264 (397)
T 1wak_A          190 LAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTRQYRSLEV  264 (397)
T ss_dssp             HHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCGGGCCHHH
T ss_pred             hhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCCcccCChh
Confidence                                                        8999999999875422     234578999999999


Q ss_pred             cccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcch----hHhHhHhhhccCc-------------------ccccccC
Q 003786          651 AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSL----TLLGHAWDLWKDD-------------------RAWELID  707 (795)
Q Consensus       651 ~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~----~~~~~~~~~~~~~-------------------~~~~~id  707 (795)
                      +.+..++.++|||||||++|||++|+.||........    .............                   ....+.+
T Consensus       265 ~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  344 (397)
T 1wak_A          265 LIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITK  344 (397)
T ss_dssp             HHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCC
T ss_pred             hcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccc
Confidence            9999999999999999999999999999976543221    1111110100000                   0000000


Q ss_pred             ccc---------cchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          708 PTL---------QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       708 ~~l---------~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ...         ....+......+.+|+.+||+.||++|||+.|++++
T Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  392 (397)
T 1wak_A          345 LKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH  392 (397)
T ss_dssp             CCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred             cCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence            000         001245567788999999999999999999999975

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=1.3e-37  Score=331.94  Aligned_cols=254  Identities=22%  Similarity=0.295  Sum_probs=203.9

Q ss_pred             HHccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCc---------cchHHHHHHHHHHHhcC-Ccccceeeeee
Q 003786          472 AATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG---------QGQEEFKNEIKLIAKLQ-HRNLVRLLGCC  540 (795)
Q Consensus       472 ~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---------~~~~~~~~E~~~l~~l~-h~niv~l~~~~  540 (795)
                      ...++|++.+.||+|+||.||+|+.. +++.||||++.....         ...+.+.+|+++++++. ||||+++++++
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~   93 (298)
T 1phk_A           14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY   93 (298)
T ss_dssp             -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence            34578999999999999999999875 588999999865421         22356789999999996 99999999999


Q ss_pred             eecceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeec
Q 003786          541 IELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISD  620 (795)
Q Consensus       541 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~D  620 (795)
                      .+....++||||+++++|.+++..   ...+++..+..++.||+.||.|||+++   |+||||||+||+++.++.+||+|
T Consensus        94 ~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~d  167 (298)
T 1phk_A           94 ETNTFFFLVFDLMKKGELFDYLTE---KVTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTD  167 (298)
T ss_dssp             ECSSEEEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECC
T ss_pred             ccCCeEEEEEeccCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEcCCCcEEEec
Confidence            999999999999999999999854   345889999999999999999999998   99999999999999999999999


Q ss_pred             cccccccCCCcccccccccccccccccccccc------cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHh
Q 003786          621 FGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ------QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAW  694 (795)
Q Consensus       621 FGla~~~~~~~~~~~~~~~~gt~~y~APE~~~------~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~  694 (795)
                      ||++.......   ......|++.|+|||++.      ...++.++||||||+++|+|++|+.|+........  .....
T Consensus       168 fg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~--~~~~~  242 (298)
T 1phk_A          168 FGFSCQLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLM--LRMIM  242 (298)
T ss_dssp             CTTCEECCTTC---CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHH
T ss_pred             ccchhhcCCCc---ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHH--HHHHh
Confidence            99998765332   223457899999999885      45689999999999999999999999865432111  11110


Q ss_pred             hhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          695 DLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       695 ~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .    ... .     .........+..+.+++.+||+.||++|||+.|++++
T Consensus       243 ~----~~~-~-----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  284 (298)
T 1phk_A          243 S----GNY-Q-----FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH  284 (298)
T ss_dssp             H----TCC-C-----CCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             c----CCc-c-----cCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhC
Confidence            0    000 0     0011112334578899999999999999999999874

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=7.2e-38  Score=351.70  Aligned_cols=199  Identities=22%  Similarity=0.274  Sum_probs=171.9

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhc------CCcccceeeeeeeeccee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKL------QHRNLVRLLGCCIELEEK  546 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~~~~~~~~~~  546 (795)
                      ..+|++.++||+|+||.||+|+.. +++.||||++... ....+.+.+|+++++.+      .|+||+++++++......
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  174 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI  174 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred             cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence            467999999999999999999865 5889999999653 23346778899998887      577999999999999999


Q ss_pred             eEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCC--eeeeccccc
Q 003786          547 ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMN--PKISDFGMA  624 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~--vkL~DFGla  624 (795)
                      ++||||+. ++|.+++.... ...+++..+..++.||++||+|||+.+   |+||||||+||||+.++.  +||+|||++
T Consensus       175 ~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NILl~~~~~~~vkL~DFG~a  249 (429)
T 3kvw_A          175 CMTFELLS-MNLYELIKKNK-FQGFSLPLVRKFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSS  249 (429)
T ss_dssp             EEEECCCC-CBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHHT---EECSCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred             EEEEeccC-CCHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEccCCCcceEEeecccc
Confidence            99999997 58887775432 234889999999999999999999998   999999999999999987  999999999


Q ss_pred             cccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCC
Q 003786          625 RIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSN  683 (795)
Q Consensus       625 ~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~  683 (795)
                      ......     .....||+.|+|||++.+..++.++|||||||++|||++|.+||...+
T Consensus       250 ~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~  303 (429)
T 3kvw_A          250 CYEHQR-----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED  303 (429)
T ss_dssp             EETTCC-----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             eecCCc-----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence            764322     234678999999999999999999999999999999999999997654

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=7.7e-38  Score=349.22  Aligned_cols=269  Identities=23%  Similarity=0.319  Sum_probs=184.4

Q ss_pred             cCCcc-ccccCcCCcccEEEeEec---CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeee--cceeeE
Q 003786          475 ANFST-ENKLGEGGFGPVYKGRLL---NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIE--LEEKIL  548 (795)
Q Consensus       475 ~~~~~-~~~LG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~l  548 (795)
                      +.|++ +++||+|+||.||+|+..   +++.||||++...  .....+.+|+.+|++++||||+++++++..  ....++
T Consensus        20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~l   97 (405)
T 3rgf_A           20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWL   97 (405)
T ss_dssp             HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSS--SCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEE
T ss_pred             hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCC--CCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEE
Confidence            34655 568999999999999865   4788999999653  334578899999999999999999999954  678899


Q ss_pred             EeecCCCCChhhhhhccC------CcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEE----CCCCCeee
Q 003786          549 IYEYMPNKSLDFFLFDST------KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILL----DKDMNPKI  618 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll----~~~~~vkL  618 (795)
                      ||||+.+ +|.+++....      ....+++..+..++.||+.||.|||+.+   |+||||||+||||    +.++.+||
T Consensus        98 v~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl  173 (405)
T 3rgf_A           98 LFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKI  173 (405)
T ss_dssp             EEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred             EEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeCCCcCHHHeEEecCCCCCCcEEE
Confidence            9999975 6666553211      1234889999999999999999999998   9999999999999    77899999


Q ss_pred             eccccccccCCCcc-ccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcc-------hhH
Q 003786          619 SDFGMARIFGGDEL-QSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNS-------LTL  689 (795)
Q Consensus       619 ~DFGla~~~~~~~~-~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~-------~~~  689 (795)
                      +|||+++....... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.......       ...
T Consensus       174 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~  253 (405)
T 3rgf_A          174 ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQ  253 (405)
T ss_dssp             CCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHH
T ss_pred             EECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHH
Confidence            99999987643211 122344679999999999877 469999999999999999999999997544211       011


Q ss_pred             hHhHhhhccC--cccccccCc-------------cccchhh---------HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 003786          690 LGHAWDLWKD--DRAWELIDP-------------TLQNEAS---------YLILNRYINVGLLCVQEDAADRPTMFEVVS  745 (795)
Q Consensus       690 ~~~~~~~~~~--~~~~~~id~-------------~l~~~~~---------~~~~~~l~~li~~cL~~dP~~RPt~~evl~  745 (795)
                      +.........  ...+..+..             .......         ......+.+|+.+||+.||++|||++|+++
T Consensus       254 l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~  333 (405)
T 3rgf_A          254 LDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ  333 (405)
T ss_dssp             HHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            1111110000  000000000             0000000         001346789999999999999999999999


Q ss_pred             HHcc
Q 003786          746 MLTN  749 (795)
Q Consensus       746 ~L~~  749 (795)
                      +-=.
T Consensus       334 hp~f  337 (405)
T 3rgf_A          334 DPYF  337 (405)
T ss_dssp             SGGG
T ss_pred             Chhh
Confidence            7543

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=4e-38  Score=340.63  Aligned_cols=260  Identities=27%  Similarity=0.402  Sum_probs=200.2

Q ss_pred             cHHhHHHHccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhc-CCcccceeeeeeee-
Q 003786          466 SLASVSAATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIE-  542 (795)
Q Consensus       466 ~~~~i~~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~-  542 (795)
                      ....+....++|++.+.||+|+||.||+|+.. +++.||||++... ....+.+.+|+.+++++ +||||+++++++.. 
T Consensus        15 ~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~   93 (326)
T 2x7f_A           15 DLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKK   93 (326)
T ss_dssp             -CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-SSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEEC
T ss_pred             cchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecC-cccHHHHHHHHHHHHhccCCCCeeeeeeEEeec
Confidence            34444556789999999999999999999874 6899999998654 34567899999999999 79999999999987 


Q ss_pred             -----cceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCee
Q 003786          543 -----LEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPK  617 (795)
Q Consensus       543 -----~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vk  617 (795)
                           ....++||||+++++|.+++... ....+++..+..++.||+.||.|||+.+   |+||||||+||+++.++.+|
T Consensus        94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~k  169 (326)
T 2x7f_A           94 NPPGMDDQLWLVMEFCGAGSVTDLIKNT-KGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVK  169 (326)
T ss_dssp             C--CCCCEEEEEEECCTTEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEE
T ss_pred             cCccccceEEEEEEcCCCCcHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCcHHHEEEcCCCCEE
Confidence                 46789999999999999998643 2346889999999999999999999998   99999999999999999999


Q ss_pred             eeccccccccCCCcccccccccccccccccccccc-----cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHh
Q 003786          618 ISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ-----QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGH  692 (795)
Q Consensus       618 L~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~-----~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~  692 (795)
                      |+|||++.......  .......||+.|+|||++.     +..++.++|||||||++|+|++|..||........  .. 
T Consensus       170 l~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~-  244 (326)
T 2x7f_A          170 LVDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA--LF-  244 (326)
T ss_dssp             ECCCTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH--HH-
T ss_pred             EeeCcCceecCcCc--cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH--HH-
Confidence            99999998654321  1223457899999999986     56789999999999999999999999865432111  10 


Q ss_pred             HhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          693 AWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       693 ~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                        .... ........        ...+..+.+++.+||+.||++||++.+++++
T Consensus       245 --~~~~-~~~~~~~~--------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  287 (326)
T 2x7f_A          245 --LIPR-NPAPRLKS--------KKWSKKFQSFIESCLVKNHSQRPATEQLMKH  287 (326)
T ss_dssp             --HHHH-SCCCCCSC--------SCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             --Hhhc-CccccCCc--------cccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence              0000 00111111        1123467889999999999999999999985

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=8.1e-38  Score=343.90  Aligned_cols=264  Identities=22%  Similarity=0.258  Sum_probs=201.7

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeec-----cee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL-----EEK  546 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~  546 (795)
                      ..+|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+++|++++||||+++++++...     ...
T Consensus        26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  105 (364)
T 3qyz_A           26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV  105 (364)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence            468999999999999999999865 58889999997533 23346788999999999999999999998765     367


Q ss_pred             eEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          547 ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                      ++||||+.+ +|.+++..    ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++..
T Consensus       106 ~iv~e~~~~-~L~~~l~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~  177 (364)
T 3qyz_A          106 YIVQDLMET-DLYKLLKT----QHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV  177 (364)
T ss_dssp             EEEEECCSE-EHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEEEcccCc-CHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChHhEEECCCCCEEEEeCcceEe
Confidence            999999985 88887743    34889999999999999999999998   99999999999999999999999999987


Q ss_pred             cCCCccc-cccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcc---
Q 003786          627 FGGDELQ-SKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDR---  701 (795)
Q Consensus       627 ~~~~~~~-~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~---  701 (795)
                      ....... .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.........  ...........   
T Consensus       178 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~--~~i~~~~~~~~~~~  255 (364)
T 3qyz_A          178 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL--NHILGILGSPSQED  255 (364)
T ss_dssp             CCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHH--HHHHHHHCSCCHHH
T ss_pred             cCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHH--HHHHHHhCCCCHHH
Confidence            6433211 11244589999999998654 56899999999999999999999999765433221  11100000000   


Q ss_pred             cc------------cccCccc--cchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          702 AW------------ELIDPTL--QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       702 ~~------------~~id~~l--~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                      ..            ....+..  ...........+.+++.+||+.||++|||+.|++++-
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp  315 (364)
T 3qyz_A          256 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP  315 (364)
T ss_dssp             HHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSG
T ss_pred             HHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCc
Confidence            00            0000000  0011122345688999999999999999999999863

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=5.6e-38  Score=337.98  Aligned_cols=264  Identities=25%  Similarity=0.304  Sum_probs=195.4

Q ss_pred             ccCCccccccCcCCcccEEEeEecC-cceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeee-----------
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCI-----------  541 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-----------  541 (795)
                      .++|++.+.||+|+||.||+|+... ++.||||++........+.+.+|++++++++||||+++++++.           
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   89 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG   89 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred             CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence            4689999999999999999998764 8999999997666566678999999999999999999998873           


Q ss_pred             ---ecceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEEC-CCCCee
Q 003786          542 ---ELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLD-KDMNPK  617 (795)
Q Consensus       542 ---~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~-~~~~vk  617 (795)
                         +....++||||++ ++|.+++.    ...+++..+..++.||++||+|||+++   |+||||||+||+++ .++.+|
T Consensus        90 ~~~~~~~~~lv~e~~~-~~L~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~k  161 (320)
T 2i6l_A           90 SLTELNSVYIVQEYME-TDLANVLE----QGPLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLK  161 (320)
T ss_dssp             -CCSCSEEEEEEECCS-EEHHHHHT----TCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTTEEE
T ss_pred             cccccCceeEEeeccC-CCHHHHhh----cCCccHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCeEE
Confidence               4467899999998 58988883    245889999999999999999999998   99999999999997 567999


Q ss_pred             eeccccccccCCCcc-ccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhh
Q 003786          618 ISDFGMARIFGGDEL-QSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWD  695 (795)
Q Consensus       618 L~DFGla~~~~~~~~-~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~  695 (795)
                      |+|||+++....... ........+|+.|+|||.+.+ ..++.++|||||||++|||++|+.||........  ......
T Consensus       162 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~--~~~~~~  239 (320)
T 2i6l_A          162 IGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQ--MQLILE  239 (320)
T ss_dssp             ECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHH
T ss_pred             EccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHH--HHHHHH
Confidence            999999987643211 122234567999999998765 6899999999999999999999999976542211  111000


Q ss_pred             hcc---Ccccccc---c---------Cccc-cchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          696 LWK---DDRAWEL---I---------DPTL-QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       696 ~~~---~~~~~~~---i---------d~~l-~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                      ...   .....++   +         .+.. ........+..+.+++.+||+.||++|||+.|++++-
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp  307 (320)
T 2i6l_A          240 SIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHP  307 (320)
T ss_dssp             HSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSH
T ss_pred             hcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCc
Confidence            000   0000000   0         0000 0011122456788999999999999999999999863

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=3.6e-37  Score=349.54  Aligned_cols=260  Identities=19%  Similarity=0.241  Sum_probs=204.6

Q ss_pred             ccCCccccccCcCCcccEEEeEe-cCcceEEEEEecccCccchHHHHHHHHHHHhcCC-cccceeeeeeeecceeeEEee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQH-RNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~E  551 (795)
                      .++|++.++||+|+||.||+|+. .+++.||||++....  ...++.+|+++++.++| ++|..+..++.+.+..++|||
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme   83 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD   83 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC--SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc--ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence            47899999999999999999986 468999999876543  33468899999999987 555566667778888899999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEE---CCCCCeeeeccccccccC
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILL---DKDMNPKISDFGMARIFG  628 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll---~~~~~vkL~DFGla~~~~  628 (795)
                      |+ +++|.+++...  ...+++..+..++.||+.||.|||+++   |+||||||+||||   +.++.+||+|||+++.+.
T Consensus        84 ~~-g~sL~~ll~~~--~~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~  157 (483)
T 3sv0_A           84 LL-GPSLEDLFNFC--SRKLSLKTVLMLADQMINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR  157 (483)
T ss_dssp             CC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred             CC-CCCHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCcceEEEecCCCCCeEEEEeCCcceecc
Confidence            99 99999998532  345899999999999999999999998   9999999999999   688999999999998765


Q ss_pred             CCccc-----ccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcch-hHhHhHhhhccCccc
Q 003786          629 GDELQ-----SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSL-TLLGHAWDLWKDDRA  702 (795)
Q Consensus       629 ~~~~~-----~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~-~~~~~~~~~~~~~~~  702 (795)
                      .....     .......||+.|+|||++.+..++.++|||||||+||||++|+.||........ ........    ...
T Consensus       158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~----~~~  233 (483)
T 3sv0_A          158 DTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE----KKV  233 (483)
T ss_dssp             CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHH----HHH
T ss_pred             CCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhh----ccc
Confidence            43221     122356799999999999999999999999999999999999999976543222 11111100    000


Q ss_pred             ccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          703 WELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       703 ~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                      ...     .......++..+.+++..||+.+|++||++.+|+++|+..
T Consensus       234 ~~~-----~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l  276 (483)
T 3sv0_A          234 ATS-----IEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL  276 (483)
T ss_dssp             HSC-----HHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred             ccc-----HHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            000     0111122345788999999999999999999999988663

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=3.4e-38  Score=339.97  Aligned_cols=264  Identities=23%  Similarity=0.360  Sum_probs=200.3

Q ss_pred             HHccCCccccccCcCCcccEEEeEecCcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          472 AATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       472 ~~~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      ...++|++.+.||+|+||.||+|+..  ..+|+|++....  ....+.+.+|+.++++++||||+++++++.+....++|
T Consensus        30 i~~~~~~~~~~lg~G~~g~V~~~~~~--~~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv  107 (319)
T 2y4i_B           30 IPFEQLEIGELIGKGRFGQVYHGRWH--GEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAII  107 (319)
T ss_dssp             SCCSCEECCCBCCCSSSSEEEEEEES--SSEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEE
T ss_pred             CCHHHeEEeeEeccCCceEEEEEEEc--CeEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEE
Confidence            34578999999999999999999864  369999986542  23346788999999999999999999999999999999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      |||+++++|.+++...  ...+++..+..++.||++||+|||+++   |+||||||+||+++ ++.+||+|||++.....
T Consensus       108 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~  181 (319)
T 2y4i_B          108 TSLCKGRTLYSVVRDA--KIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYD-NGKVVITDFGLFSISGV  181 (319)
T ss_dssp             CBCCCSEEHHHHTTSS--CCCCCSHHHHHHHHHHHHHHHHHHHTT---CCCCCCCSTTEEEC---CCEECCCSCCC----
T ss_pred             eecccCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChhhEEEe-CCCEEEeecCCcccccc
Confidence            9999999999998542  345889999999999999999999998   99999999999998 68999999999876532


Q ss_pred             Cc---cccccccccccccccccccccc---------CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhc
Q 003786          630 DE---LQSKTKRIVGTYGYMSPEYAQQ---------GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLW  697 (795)
Q Consensus       630 ~~---~~~~~~~~~gt~~y~APE~~~~---------~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~  697 (795)
                      ..   .........|++.|+|||++..         ..++.++|||||||++|||++|+.||........  ....    
T Consensus       182 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~--~~~~----  255 (319)
T 2y4i_B          182 LQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAI--IWQM----  255 (319)
T ss_dssp             ------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHH--HHHH----
T ss_pred             ccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHh----
Confidence            11   1122233568999999998864         4578999999999999999999999875432221  1111    


Q ss_pred             cCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccccCCCCCC
Q 003786          698 KDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHP  757 (795)
Q Consensus       698 ~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~~~l~~p  757 (795)
                      ...........        ..+..+.+++.+||+.+|++|||+.+++++|+.........
T Consensus       256 ~~~~~~~~~~~--------~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~~  307 (319)
T 2y4i_B          256 GTGMKPNLSQI--------GMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRRL  307 (319)
T ss_dssp             HTTCCCCCCCS--------SCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-------
T ss_pred             ccCCCCCCCcC--------CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhccC
Confidence            11111111110        12345778999999999999999999999998865544433

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=1.8e-37  Score=342.05  Aligned_cols=259  Identities=21%  Similarity=0.263  Sum_probs=197.4

Q ss_pred             HccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeeccee---
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEK---  546 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~---  546 (795)
                      ..++|.+.+.||+|+||.||+|+.. +++.||||++....  ....+.+.+|+.++++++||||+++++++...+..   
T Consensus        40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~  119 (371)
T 4exu_A           40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF  119 (371)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred             ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence            3478999999999999999999865 58999999997542  22346788999999999999999999999887765   


Q ss_pred             ---eEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccc
Q 003786          547 ---ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGM  623 (795)
Q Consensus       547 ---~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGl  623 (795)
                         ++||||+. ++|...+.     ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+
T Consensus       120 ~~~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kL~Dfg~  190 (371)
T 4exu_A          120 YDFYLVMPFMQ-TDLQKIMG-----MEFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGL  190 (371)
T ss_dssp             CCCEEEEECCC-EEHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECSTTC
T ss_pred             eeEEEEEcccc-ccHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCcCHHHeEECCCCCEEEEecCc
Confidence               99999998 57777662     23889999999999999999999998   99999999999999999999999999


Q ss_pred             ccccCCCccccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccC--c
Q 003786          624 ARIFGGDELQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKD--D  700 (795)
Q Consensus       624 a~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~--~  700 (795)
                      ++.....     .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||........  ..........  .
T Consensus       191 a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~i~~~~~~~~~  263 (371)
T 4exu_A          191 ARHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ--LTQILKVTGVPGT  263 (371)
T ss_dssp             C-------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHHHCCCCH
T ss_pred             ccccccC-----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHHHhCCCcH
Confidence            9865322     234578999999999877 7899999999999999999999999976542221  1111000000  0


Q ss_pred             cccccc------------Ccccc---chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          701 RAWELI------------DPTLQ---NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       701 ~~~~~i------------d~~l~---~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                      .....+            .....   ..........+.+++.+||+.||++|||+.|++++-
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp  325 (371)
T 4exu_A          264 EFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHP  325 (371)
T ss_dssp             HHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSG
T ss_pred             HHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCc
Confidence            000000            00000   011122346788999999999999999999999863

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=2.9e-37  Score=335.09  Aligned_cols=262  Identities=22%  Similarity=0.278  Sum_probs=202.9

Q ss_pred             ccCCccccccCcCCcccEEEeEe--cCcceEEEEEecccCccchHHHHHHHHHHHhcCCcc------cceeeeeeeecce
Q 003786          474 TANFSTENKLGEGGFGPVYKGRL--LNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRN------LVRLLGCCIELEE  545 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~  545 (795)
                      .++|++.+.||+|+||.||+|..  .+++.||||++... ....+.+.+|+++++.++|++      ++++++++.+.+.
T Consensus        13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~   91 (339)
T 1z57_A           13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH   91 (339)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred             cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence            46899999999999999999986  35889999999643 234567889999999997665      9999999999999


Q ss_pred             eeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECC-------------
Q 003786          546 KILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDK-------------  612 (795)
Q Consensus       546 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~-------------  612 (795)
                      .++||||+ +++|.+++.... ...+++..+..++.||++||.|||+++   |+||||||+|||++.             
T Consensus        92 ~~lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~~~~~~  166 (339)
T 1z57_A           92 ICIVFELL-GLSTYDFIKENG-FLPFRLDHIRKMAYQICKSVNFLHSNK---LTHTDLKPENILFVQSDYTEAYNPKIKR  166 (339)
T ss_dssp             EEEEEECC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCCCEEEEEC----C
T ss_pred             EEEEEcCC-CCCHHHHHHhcC-CCCCcHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeccccccccCCcccc
Confidence            99999999 889988885432 235788999999999999999999998   999999999999987             


Q ss_pred             ------CCCeeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcc
Q 003786          613 ------DMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNS  686 (795)
Q Consensus       613 ------~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~  686 (795)
                            ++.+||+|||++......     .....||+.|+|||++.+..++.++|||||||++|||++|..||...+...
T Consensus       167 ~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~  241 (339)
T 1z57_A          167 DERTLINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE  241 (339)
T ss_dssp             EEEEESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH
T ss_pred             ccccccCCCceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH
Confidence                  678999999999864322     234578999999999999999999999999999999999999997654322


Q ss_pred             hh-HhHhHhh--------hccCccc-------cc-----------ccCccc-cchhhHHHHHHHHHHHHhhccCCCCCCC
Q 003786          687 LT-LLGHAWD--------LWKDDRA-------WE-----------LIDPTL-QNEASYLILNRYINVGLLCVQEDAADRP  738 (795)
Q Consensus       687 ~~-~~~~~~~--------~~~~~~~-------~~-----------~id~~l-~~~~~~~~~~~l~~li~~cL~~dP~~RP  738 (795)
                      .. .......        .......       +.           ...+.. ...........+.+++.+||+.||++||
T Consensus       242 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp  321 (339)
T 1z57_A          242 HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRI  321 (339)
T ss_dssp             HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSC
T ss_pred             HHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCccccc
Confidence            11 1100000        0000000       00           000000 0011234567788999999999999999


Q ss_pred             CHHHHHHH
Q 003786          739 TMFEVVSM  746 (795)
Q Consensus       739 t~~evl~~  746 (795)
                      |+.|++++
T Consensus       322 t~~ell~h  329 (339)
T 1z57_A          322 TLREALKH  329 (339)
T ss_dssp             CHHHHTTS
T ss_pred             CHHHHhcC
Confidence            99999875

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=2.8e-37  Score=333.84  Aligned_cols=265  Identities=26%  Similarity=0.365  Sum_probs=203.0

Q ss_pred             HHccCCccccccCcCCcccEEEeEe--cCcceEEEEEecccCc--cchHHHHHHHHHHHhc---CCcccceeeeeee---
Q 003786          472 AATANFSTENKLGEGGFGPVYKGRL--LNGQEVAVKRLSSQSG--QGQEEFKNEIKLIAKL---QHRNLVRLLGCCI---  541 (795)
Q Consensus       472 ~~~~~~~~~~~LG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~~~~~---  541 (795)
                      ...++|++.+.||+|+||.||+|+.  .+++.||||++.....  .....+.+|+.+++.+   +||||+++++++.   
T Consensus         8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~   87 (326)
T 1blx_A            8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR   87 (326)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred             CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence            3457899999999999999999987  3578899999865322  2234677888888777   8999999999987   


Q ss_pred             --ecceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeee
Q 003786          542 --ELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKIS  619 (795)
Q Consensus       542 --~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~  619 (795)
                        .....++||||++ ++|.+++.... ...+++..+..++.||+.||.|||+++   |+||||||+||+++.++.+||+
T Consensus        88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~g---i~H~dlkp~Nili~~~~~~kl~  162 (326)
T 1blx_A           88 TDRETKLTLVFEHVD-QDLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLA  162 (326)
T ss_dssp             CSSEEEEEEEEECCS-CBHHHHHHHSC-TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEEC
T ss_pred             cCCCceEEEEEecCC-CCHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHHHeEEcCCCCEEEe
Confidence              5677899999998 59988885432 334889999999999999999999998   9999999999999999999999


Q ss_pred             ccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhcc-
Q 003786          620 DFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWK-  698 (795)
Q Consensus       620 DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~-  698 (795)
                      |||++.......   ......||+.|+|||++.+..++.++|||||||++|+|++|+.||........  ......... 
T Consensus       163 Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~i~~~~~~  237 (326)
T 1blx_A          163 DFGLARIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ--LGKILDVIGL  237 (326)
T ss_dssp             SCCSCCCCCGGG---GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHHHCC
T ss_pred             cCcccccccCCC---CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHH--HHHHHHHcCC
Confidence            999998654222   23346789999999999999999999999999999999999999976542221  111110000 


Q ss_pred             --Ccccc-------ccc---CccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          699 --DDRAW-------ELI---DPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       699 --~~~~~-------~~i---d~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                        .....       ...   ...............+.+++.+||+.||++|||+.|++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  297 (326)
T 1blx_A          238 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  297 (326)
T ss_dssp             CCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             CCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence              00000       000   0000111222345677899999999999999999999975

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1

Probab=100.00  E-value=5.3e-37  Score=314.77  Aligned_cols=216  Identities=13%  Similarity=0.183  Sum_probs=165.0

Q ss_pred             cccccCCCCCccCCCCeEEeCCCeEEEEEeCCCCCCceEEEEEeccCCCeEEEecCCCCCCccCcceEEEeeCCceEEeC
Q 003786           23 IAADNITPSRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPDTIVWVANRNSPIFDSNAVLTISNGGKLVLLN  102 (795)
Q Consensus        23 ~~~~~l~~~~~l~~~~~l~s~~g~f~lgf~~~~~~~~~~~~iw~~~~~~t~vW~an~~~p~~~~~~~l~~~~~g~lvl~~  102 (795)
                      ++.|+|.+||+|.+|++|  ++|.|+|||+.+++     +.+|..   +|+||+|||+.|   ..+.|+|+.||||||+|
T Consensus         6 ~~~~~i~~g~~L~~g~~l--~~g~f~l~f~~~gn-----l~ly~~---~~~vW~an~~~~---~~~~l~l~~dGnLvl~d   72 (236)
T 1dlp_A            6 GLSHEGSHPQTLHAAQSL--ELSSFRFTMQSDCN-----LVLFDS---DVRVWASNTAGA---TGCRAVLQSDGLLVILT   72 (236)
T ss_dssp             CSSSSSCSCSCCCTTCEE--CSTTEEEEECTTSC-----EEEEES---SSEEECCCCCSC---SCCBCCBCSSSCBCCBC
T ss_pred             eccceeCCCCEECCCCEE--EcCCEEEEECCCCc-----EEEEEC---CEEEEECCCCCC---CCeEEEEcCCCcEEEEc
Confidence            567999999999999999  58999999998875     334443   699999999988   57899999999999999


Q ss_pred             CCCceEEeecCCCCccccEEEEccCCCeEEeecCCCCCcccceecccCCCchhh-hccCeecccc-ccCc-----ceeEE
Q 003786          103 QTNGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQSFDHPSDTL-LAGMKLGWDL-KTGL-----ERYQT  175 (795)
Q Consensus       103 ~~~~~~Wst~~~~~~~~~~a~l~d~GNlvl~~~~~~~~~~~~~WqSFd~PTDtl-Lpgqkl~~~~-~~~~-----~~~l~  175 (795)
                      ++|.+||+|++......+.|+|+|+|||||++     .   ++||||||||||+ ||||  |.|. .+|+     .+.|+
T Consensus        73 ~~~~~vW~s~~~~~~~~~~~~l~d~Gnlvl~~-----~---~~W~S~~~p~~t~~lp~~--g~d~L~~gq~~~~~~~~L~  142 (236)
T 1dlp_A           73 AQNTIRWSSGTKGSIGNYVLVLQPDRTVTIYG-----P---GLWDSGTSNKGSVVVANN--GNSILYSTQGNDNHPQTLH  142 (236)
T ss_dssp             TTTCCSCCCCCCCCSSCCEEEECSSSCEEEEC-----S---EEEECSCCCSSCCCCSSC--CCEECCCC--CCCCCCEEC
T ss_pred             CCCcEEEeCCccccCCcEEEEEeCCCCEEEec-----C---CEEECCCCCCcccccCCc--cceEEecCCcCCCccceEE
Confidence            99999999998765556789999999999995     2   7999999998776 5554  4443 3333     55676


Q ss_pred             EecCCCCCCCCceEEeeccCCcceEEEEcCceeEEeeCCCCCeeeeccCCCccccc-ceeeeCCCeeEEEEecCCCceEE
Q 003786          176 SWKSDDDPSPGNYTHRLDIHVLPKLCTYNGSVKLLCSGPWNGAIFAAIPSYSYLYK-PTVVDNEDEIYYRYDSYNSPVIM  254 (795)
Q Consensus       176 Sw~s~~dps~G~ys~~~~~~~~~~~~~~~~s~~~~~sg~w~~~~f~~~p~~~~~~~-~~~~~n~~~~~~~~~~~~~~~~~  254 (795)
                         +..||++|.|+++++++|  ++++++++.+||++|+|++. +...+.....-. ..+-.+..+++++|...+. ...
T Consensus       143 ---s~~d~s~G~~~l~l~~dG--~LvL~~~~~~~W~s~~~~~~-~~~~~~L~~~Gnl~ly~~~~~~vw~s~~~~~~-~~~  215 (236)
T 1dlp_A          143 ---ATQSLQLSPYRLSMETDC--NLVLFDRDDRVWSTNTAGKG-TGCRAVLQPNGRMDVLTNQNIAVWTSGNSRSA-GRY  215 (236)
T ss_dssp             ---SSCCCBCSSCEEEEETTT--EEEEEBTTBCCSCCCCCSSC-SSCEEEEETTTEEEEEETTTEEEEECCCCCSS-SCC
T ss_pred             ---cCcEeecCcEEEEECCCC--cEEEEcCCEeEEeCCCcCCC-CceEEEECCCCcEEEEeCCCcEEEEeCCCCCC-CCE
Confidence               478999999999999988  67888888899999999754 333332110001 1122234455555554333 468


Q ss_pred             EEEECCCCcEEEEE
Q 003786          255 TLKLNPSGKIQHLI  268 (795)
Q Consensus       255 rl~L~~~G~l~~~~  268 (795)
                      |++|++||++++|.
T Consensus       216 rl~Ld~dG~l~ly~  229 (236)
T 1dlp_A          216 VFVLQPDRNLAIYG  229 (236)
T ss_dssp             EEEECSSSCEEEEC
T ss_pred             EEEEcCCCcEEEeC
Confidence            99999999999983

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=4.5e-37  Score=326.27  Aligned_cols=252  Identities=25%  Similarity=0.330  Sum_probs=202.5

Q ss_pred             HccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      ..++|++.+.||+|+||.||+|+.. +++.||||++....  ....+.+.+|++++++++||||+++++++.+....++|
T Consensus        20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   99 (287)
T 2wei_A           20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV   99 (287)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence            3478999999999999999999875 68999999986542  34567899999999999999999999999999999999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCC---CCeeeeccccccc
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKD---MNPKISDFGMARI  626 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~---~~vkL~DFGla~~  626 (795)
                      |||+++++|.+.+...   ..+++..+..++.||+.||.|||+.+   |+||||||+||+++.+   +.+||+|||++..
T Consensus       100 ~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~  173 (287)
T 2wei_A          100 GELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTC  173 (287)
T ss_dssp             ECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECSTTGGGT
T ss_pred             EEccCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChhhEEEecCCCcccEEEeccCccee
Confidence            9999999998887532   35889999999999999999999998   9999999999999764   4699999999987


Q ss_pred             cCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCccccccc
Q 003786          627 FGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELI  706 (795)
Q Consensus       627 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i  706 (795)
                      .....   ......|++.|+|||.+.+. ++.++||||||+++|+|++|..||.......  .....    ......   
T Consensus       174 ~~~~~---~~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~~~~----~~~~~~---  240 (287)
T 2wei_A          174 FQQNT---KMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYD--ILKRV----ETGKYA---  240 (287)
T ss_dssp             BCCCS---SCSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHH----HHCCCC---
T ss_pred             ecCCC---ccccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCCCCHHH--HHHHH----HcCCCC---
Confidence            64332   12334689999999988754 8999999999999999999999987543221  11111    001000   


Q ss_pred             CccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          707 DPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       707 d~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                         .........+..+.+++.+||+.+|++|||+.|++++
T Consensus       241 ---~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h  277 (287)
T 2wei_A          241 ---FDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH  277 (287)
T ss_dssp             ---CCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             ---CCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence               0000111234567899999999999999999999984

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=2.7e-37  Score=337.94  Aligned_cols=264  Identities=24%  Similarity=0.292  Sum_probs=200.1

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeec-----cee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL-----EEK  546 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~  546 (795)
                      .++|++.+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++...     ...
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   89 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV   89 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence            478999999999999999999875 58899999996532 23346788999999999999999999987754     678


Q ss_pred             eEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          547 ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                      ++||||+. ++|.+++..    ..+++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||++..
T Consensus        90 ~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~  161 (353)
T 2b9h_A           90 YIIQELMQ-TDLHRVIST----QMLSDDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARI  161 (353)
T ss_dssp             EEEECCCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEEEeccC-ccHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEcCCCcEEEEecccccc
Confidence            99999998 588888743    35889999999999999999999998   99999999999999999999999999987


Q ss_pred             cCCCcccc--------ccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhc
Q 003786          627 FGGDELQS--------KTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLW  697 (795)
Q Consensus       627 ~~~~~~~~--------~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~  697 (795)
                      ........        ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...+.......  .....
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~--~~~~~  239 (353)
T 2b9h_A          162 IDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLL--IFGII  239 (353)
T ss_dssp             CC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH--HHHHH
T ss_pred             cccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHH--HHHHh
Confidence            64322111        1223578999999998754 7899999999999999999999999976542221111  00000


Q ss_pred             cCcc---cccccC---------------ccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          698 KDDR---AWELID---------------PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       698 ~~~~---~~~~id---------------~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                      ....   ....+.               ..............+.+++.+||+.||++|||+.|++++-
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp  307 (353)
T 2b9h_A          240 GTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHP  307 (353)
T ss_dssp             CCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred             CCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCc
Confidence            0000   000000               0000011123446788999999999999999999999863

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=6.6e-37  Score=344.51  Aligned_cols=254  Identities=23%  Similarity=0.302  Sum_probs=189.4

Q ss_pred             cCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhc-CCcccceeeeeeeecceeeEEeecC
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEEKILIYEYM  553 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~  553 (795)
                      +.|...+.||+|+||+||.+...+|+.||||++...   ..+.+.+|+++|+++ +|||||++++++.+.+..++||||+
T Consensus        15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~   91 (434)
T 2rio_A           15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC   91 (434)
T ss_dssp             SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred             heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC
Confidence            345667889999999998776668999999998643   345678999999887 8999999999999999999999999


Q ss_pred             CCCChhhhhhccCCc----ccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCC-------------CCe
Q 003786          554 PNKSLDFFLFDSTKE----NLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKD-------------MNP  616 (795)
Q Consensus       554 ~~gsL~~~l~~~~~~----~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~-------------~~v  616 (795)
                      . |+|.+++......    ....+..+..++.||+.||+|||+++   |+||||||+|||++.+             +.+
T Consensus        92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~  167 (434)
T 2rio_A           92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRI  167 (434)
T ss_dssp             S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred             C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCcccccccccCCCceEE
Confidence            6 5999998643321    11244567889999999999999998   9999999999999754             479


Q ss_pred             eeeccccccccCCCccc--cccccccccccccccccccc-------CCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcc
Q 003786          617 KISDFGMARIFGGDELQ--SKTKRIVGTYGYMSPEYAQQ-------GLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNS  686 (795)
Q Consensus       617 kL~DFGla~~~~~~~~~--~~~~~~~gt~~y~APE~~~~-------~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~  686 (795)
                      ||+|||+++........  .......||+.|+|||++.+       ..++.++|||||||++|||++ |..||.......
T Consensus       168 kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~  247 (434)
T 2rio_A          168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE  247 (434)
T ss_dssp             EECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH
T ss_pred             EEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH
Confidence            99999999976543211  12234679999999999865       678999999999999999999 899986543322


Q ss_pred             hhHhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          687 LTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       687 ~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .....   .....        +.............+.+++.+||+.||++|||+.||+++
T Consensus       248 ~~i~~---~~~~~--------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h  296 (434)
T 2rio_A          248 SNIIR---GIFSL--------DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH  296 (434)
T ss_dssp             HHHHH---TCCCC--------CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             HHHhc---CCCCc--------ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence            21111   00000        011111234556788899999999999999999999975

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=3.2e-37  Score=329.25  Aligned_cols=253  Identities=23%  Similarity=0.350  Sum_probs=191.8

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeee----------
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIE----------  542 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----------  542 (795)
                      .++|++.+.||+|+||.||+|+.. +++.||||++... ....+.+.+|+.++++++||||+++++++.+          
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   83 (303)
T 1zy4_A            5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA   83 (303)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred             cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence            467999999999999999999864 6899999999543 3445778999999999999999999998865          


Q ss_pred             ---cceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeee
Q 003786          543 ---LEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKIS  619 (795)
Q Consensus       543 ---~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~  619 (795)
                         ....++||||+++++|.+++...  ...+++..+..++.||++||+|||+++   |+||||||+|||++.++.+||+
T Consensus        84 ~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dlkp~Nil~~~~~~~kl~  158 (303)
T 1zy4_A           84 VKKKSTLFIQMEYCENGTLYDLIHSE--NLNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIG  158 (303)
T ss_dssp             --CEEEEEEEEECCCSCBHHHHHHHS--CGGGCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEEC
T ss_pred             cccCCceEEEEecCCCCCHHHhhhcc--ccccchHHHHHHHHHHHHHHHHHHhCC---eecccCCHHhEEEcCCCCEEEe
Confidence               45678999999999999999542  345778899999999999999999998   9999999999999999999999


Q ss_pred             ccccccccCCCcc------------cccccccccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCcc
Q 003786          620 DFGMARIFGGDEL------------QSKTKRIVGTYGYMSPEYAQQG-LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNS  686 (795)
Q Consensus       620 DFGla~~~~~~~~------------~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~  686 (795)
                      |||++........            ........||+.|+|||++.+. .++.++|||||||++|||++   |+..... .
T Consensus       159 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~-~  234 (303)
T 1zy4_A          159 DFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGME-R  234 (303)
T ss_dssp             CCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHH-H
T ss_pred             eCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchh-H
Confidence            9999986542210            1122345789999999998764 78999999999999999998   3321111 1


Q ss_pred             hhHhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          687 LTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       687 ~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ......    ....      ...+....+......+.+++.+||+.||++|||+.+++++
T Consensus       235 ~~~~~~----~~~~------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  284 (303)
T 1zy4_A          235 VNILKK----LRSV------SIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS  284 (303)
T ss_dssp             HHHHHH----HHST------TCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             HHHHHh----cccc------ccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence            111111    0000      0011112223334567889999999999999999999984

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=6.1e-37  Score=335.41  Aligned_cols=257  Identities=21%  Similarity=0.265  Sum_probs=196.4

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecce-----
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEE-----  545 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-----  545 (795)
                      .++|.+.+.||+|+||.||+|+.. +|+.||||++....  ....+.+.+|+.++++++||||+++++++.....     
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  102 (353)
T 3coi_A           23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  102 (353)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence            468999999999999999999864 58999999996542  2234678899999999999999999999987654     


Q ss_pred             -eeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccc
Q 003786          546 -KILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMA  624 (795)
Q Consensus       546 -~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla  624 (795)
                       .++||||+. ++|..++.     ..+++..+..++.||+.||.|||+++   |+||||||+||+++.++.+||+|||++
T Consensus       103 ~~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~  173 (353)
T 3coi_A          103 DFYLVMPFMQ-TDLQKIMG-----LKFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLA  173 (353)
T ss_dssp             CCEEEEECCS-EEGGGTTT-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTCCEEECSTTCT
T ss_pred             eEEEEecccc-CCHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEeECCCCcEEEeecccc
Confidence             499999998 57877662     23889999999999999999999998   999999999999999999999999999


Q ss_pred             cccCCCccccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccC--cc
Q 003786          625 RIFGGDELQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKD--DR  701 (795)
Q Consensus       625 ~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~--~~  701 (795)
                      ......     .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...+....  ..........  ..
T Consensus       174 ~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~--~~~i~~~~~~~~~~  246 (353)
T 3coi_A          174 RHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ--LTQILKVTGVPGTE  246 (353)
T ss_dssp             TC-------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHH--HHHHHHHHCBCCHH
T ss_pred             cCCCCC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhCCCCHH
Confidence            865322     234578999999998877 6889999999999999999999999976442211  1110000000  00


Q ss_pred             ccc------------cc----CccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          702 AWE------------LI----DPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       702 ~~~------------~i----d~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                      ...            .+    .+.+ ..........+.+++.+||+.||++|||+.|++++-
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp  307 (353)
T 3coi_A          247 FVQKLNDKAAKSYIQSLPQTPRKDF-TQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHP  307 (353)
T ss_dssp             HHTTCSCHHHHHHHHTSCBCSSCCT-TTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSG
T ss_pred             HHHHHhhHHHHHHHHhCcCCCCccH-HHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCc
Confidence            000            00    0000 111123456788999999999999999999999863

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=1.8e-36  Score=335.50  Aligned_cols=203  Identities=24%  Similarity=0.317  Sum_probs=171.1

Q ss_pred             HHccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcC-Cc-----ccceeeeeeeecc
Q 003786          472 AATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQ-HR-----NLVRLLGCCIELE  544 (795)
Q Consensus       472 ~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~~~~  544 (795)
                      ...++|++.+.||+|+||.||+|+.. +++.||||++... .....++.+|+.+++.++ |+     +|+++++++...+
T Consensus        51 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  129 (382)
T 2vx3_A           51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN  129 (382)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred             EeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence            34578999999999999999999865 5888999999643 233567788999998885 44     4999999999999


Q ss_pred             eeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEEC--CCCCeeeeccc
Q 003786          545 EKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLD--KDMNPKISDFG  622 (795)
Q Consensus       545 ~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~--~~~~vkL~DFG  622 (795)
                      ..++||||+++ +|.+++.... ...+++..+..++.||+.||.|||.+ ..+|+||||||+||||+  .++.+||+|||
T Consensus       130 ~~~lv~e~~~~-~L~~~l~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG  206 (382)
T 2vx3_A          130 HLCLVFEMLSY-NLYDLLRNTN-FRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFG  206 (382)
T ss_dssp             EEEEEEECCCC-BHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCT
T ss_pred             ceEEEEecCCC-CHHHHHhhcC-cCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEecc
Confidence            99999999975 8888885432 23488999999999999999999953 12499999999999994  57889999999


Q ss_pred             cccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCC
Q 003786          623 MARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSN  683 (795)
Q Consensus       623 la~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~  683 (795)
                      +++.....     .....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       207 ~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~  262 (382)
T 2vx3_A          207 SSCQLGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN  262 (382)
T ss_dssp             TCEETTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             Cceecccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            99876432     234678999999999999999999999999999999999999997654

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=3.1e-37  Score=333.98  Aligned_cols=256  Identities=26%  Similarity=0.366  Sum_probs=178.7

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCc-cchHHHHHHHH-HHHhcCCcccceeeeeeeecceeeEEe
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG-QGQEEFKNEIK-LIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      .++|++.+.||+|+||.||+|+.. +++.||||++..... ....++..|+. +++.++||||+++++++.+.+..++||
T Consensus        21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~  100 (327)
T 3aln_A           21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM  100 (327)
T ss_dssp             SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence            478999999999999999999875 689999999975432 23345556665 677789999999999999999999999


Q ss_pred             ecCCCCChhhhhhc--cCCcccCChhhHHHHHHHHHHHHHHHHhc-CCCcEEeccCCCCcEEECCCCCeeeecccccccc
Q 003786          551 EYMPNKSLDFFLFD--STKENLLGWGTRVRIIEGIAQGLLYLHQY-SRLRVIHRDLKASNILLDKDMNPKISDFGMARIF  627 (795)
Q Consensus       551 E~~~~gsL~~~l~~--~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~  627 (795)
                      ||+++ +|.+++..  ......+++..+..++.|++.||.|||+. +   |+||||||+|||++.++.+||+|||+++..
T Consensus       101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~  176 (327)
T 3aln_A          101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK---IIHRDIKPSNILLDRSGNIKLCDFGISGQL  176 (327)
T ss_dssp             CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS---CCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred             eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC---EeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence            99986 77666642  11245688999999999999999999998 7   999999999999999999999999999865


Q ss_pred             CCCccccccccccccccccccccc----ccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccc
Q 003786          628 GGDELQSKTKRIVGTYGYMSPEYA----QQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAW  703 (795)
Q Consensus       628 ~~~~~~~~~~~~~gt~~y~APE~~----~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~  703 (795)
                      ....   ......||+.|+|||++    .+..++.++|||||||++|+|++|+.||...........    . ...... 
T Consensus       177 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~----~-~~~~~~-  247 (327)
T 3aln_A          177 VDSI---AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLT----Q-VVKGDP-  247 (327)
T ss_dssp             --------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------C----C-CCCSCC-
T ss_pred             cccc---ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHH----H-HhcCCC-
Confidence            4322   12234789999999998    456789999999999999999999999875332111000    0 000000 


Q ss_pred             cccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          704 ELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       704 ~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                          +.+...........+.+++.+||+.||++||++.||+++
T Consensus       248 ----~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  286 (327)
T 3aln_A          248 ----PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH  286 (327)
T ss_dssp             ----CCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             ----CCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence                111111112234578899999999999999999999874

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=1.5e-36  Score=330.01  Aligned_cols=255  Identities=18%  Similarity=0.191  Sum_probs=174.5

Q ss_pred             HccCCcccc-ccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeee----ccee
Q 003786          473 ATANFSTEN-KLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIE----LEEK  546 (795)
Q Consensus       473 ~~~~~~~~~-~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~  546 (795)
                      ..++|.+.+ .||+|+||.||+|+.. +++.||||++...    .....+....++.+.||||+++++++..    ....
T Consensus        26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~  101 (336)
T 3fhr_A           26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL  101 (336)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence            357898855 6999999999999876 5899999998542    2222333344677799999999999876    4558


Q ss_pred             eEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECC---CCCeeeecccc
Q 003786          547 ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDK---DMNPKISDFGM  623 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~---~~~vkL~DFGl  623 (795)
                      ++||||+++++|.+++.... ...+++..+..++.||+.||.|||+++   |+||||||+|||++.   ++.+||+|||+
T Consensus       102 ~lv~e~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~ql~~~l~~LH~~~---ivH~dlkp~NIll~~~~~~~~~kl~Dfg~  177 (336)
T 3fhr_A          102 LIIMECMEGGELFSRIQERG-DQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGF  177 (336)
T ss_dssp             EEEEECCTTEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred             EEEEeccCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEEecCCCceEEEecccc
Confidence            99999999999999986432 346899999999999999999999998   999999999999976   45599999999


Q ss_pred             ccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccc
Q 003786          624 ARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAW  703 (795)
Q Consensus       624 a~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~  703 (795)
                      +.......    .....||+.|+|||++.+..++.++|||||||++|+|++|..||.............  ......   
T Consensus       178 ~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~--~~~~~~---  248 (336)
T 3fhr_A          178 AKETTQNA----LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMK--RRIRLG---  248 (336)
T ss_dssp             CEEC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC------------------------
T ss_pred             ceeccccc----cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHH--Hhhhcc---
Confidence            98654322    234578999999999988899999999999999999999999986543222110000  000000   


Q ss_pred             cccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          704 ELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       704 ~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                         ...............+.+++.+||+.||++|||+.|++++.
T Consensus       249 ---~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp  289 (336)
T 3fhr_A          249 ---QYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHP  289 (336)
T ss_dssp             -----CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred             ---ccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence               00001111122345678999999999999999999999953

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=4.2e-37  Score=362.46  Aligned_cols=256  Identities=23%  Similarity=0.316  Sum_probs=201.7

Q ss_pred             HHccCCccccccCcCCcccEEEeEecC----cceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeeccee
Q 003786          472 AATANFSTENKLGEGGFGPVYKGRLLN----GQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEK  546 (795)
Q Consensus       472 ~~~~~~~~~~~LG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  546 (795)
                      ...++|++.+.||+|+||.||+|++..    +..||||++.... ....+.+.+|+.+|++++||||+++++++. .+..
T Consensus       387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~  465 (656)
T 2j0j_A          387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV  465 (656)
T ss_dssp             CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSC
T ss_pred             cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCce
Confidence            345789999999999999999998642    4569999986543 233477899999999999999999999985 5678


Q ss_pred             eEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          547 ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                      ++||||+++|+|.+++...  ...+++..+..++.||++||.|||+++   |+||||||+|||++.++.+||+|||+++.
T Consensus       466 ~lv~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDikp~NILl~~~~~vkL~DFG~a~~  540 (656)
T 2j0j_A          466 WIIMELCTLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRY  540 (656)
T ss_dssp             EEEEECCTTCBHHHHHHHT--TTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCCCCS
T ss_pred             EEEEEcCCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchHhEEEeCCCCEEEEecCCCee
Confidence            9999999999999998532  235889999999999999999999998   99999999999999999999999999987


Q ss_pred             cCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccc
Q 003786          627 FGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWEL  705 (795)
Q Consensus       627 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  705 (795)
                      ...... .......+|+.|+|||++.+..++.++|||||||++|||++ |..||........  ......    ...   
T Consensus       541 ~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~--~~~i~~----~~~---  610 (656)
T 2j0j_A          541 MEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV--IGRIEN----GER---  610 (656)
T ss_dssp             CCC-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH--HHHHHH----TCC---
T ss_pred             cCCCcc-eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHH--HHHHHc----CCC---
Confidence            644322 12233457889999999998999999999999999999997 8888865432211  111100    000   


Q ss_pred             cCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          706 IDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       706 id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                            ...+...+..+.+++.+||+.||++||++.||+++|+.
T Consensus       611 ------~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~  648 (656)
T 2j0j_A          611 ------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST  648 (656)
T ss_dssp             ------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ------CCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence                  01112234577899999999999999999999999876

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=1e-36  Score=335.87  Aligned_cols=263  Identities=20%  Similarity=0.245  Sum_probs=200.3

Q ss_pred             ccCCccccccCcCCcccEEEeEe-cCcceEEEEEecccCccchHHHHHHHHHHHhcC-----------Ccccceeeeeee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQ-----------HRNLVRLLGCCI  541 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~~  541 (795)
                      .++|++.+.||+|+||.||+|+. .+++.||||++... ....+.+.+|+.++++++           ||||+++++++.
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~   96 (373)
T 1q8y_A           18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN   96 (373)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred             CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence            46899999999999999999986 46889999999643 234567889999999886           899999999998


Q ss_pred             ecc----eeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhc-CCCcEEeccCCCCcEEEC-----
Q 003786          542 ELE----EKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY-SRLRVIHRDLKASNILLD-----  611 (795)
Q Consensus       542 ~~~----~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~~~iiHrDikp~NIll~-----  611 (795)
                      ...    ..++||||+ +++|.+++.... ...+++..+..++.||+.||.|||++ +   |+||||||+|||++     
T Consensus        97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~~---ivH~Dikp~NIll~~~~~~  171 (373)
T 1q8y_A           97 HKGPNGVHVVMVFEVL-GENLLALIKKYE-HRGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEIVDSP  171 (373)
T ss_dssp             EEETTEEEEEEEECCC-CEEHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEEEEETT
T ss_pred             ccCCCCceEEEEEecC-CCCHHHHHHHhh-ccCCcHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChHHeEEeccCCC
Confidence            665    789999999 889998885432 33488999999999999999999998 7   99999999999994     


Q ss_pred             -CCCCeeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcc----
Q 003786          612 -KDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNS----  686 (795)
Q Consensus       612 -~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~----  686 (795)
                       ..+.+||+|||++......     .....||+.|+|||++.+..++.++|||||||++|||++|+.||.......    
T Consensus       172 ~~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~  246 (373)
T 1q8y_A          172 ENLIQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD  246 (373)
T ss_dssp             TTEEEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CH
T ss_pred             cCcceEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCCh
Confidence             4457999999999865422     233578999999999999999999999999999999999999997544211    


Q ss_pred             hhHhHhHhhhcc------------------CcccccccCcc----------ccchhhHHHHHHHHHHHHhhccCCCCCCC
Q 003786          687 LTLLGHAWDLWK------------------DDRAWELIDPT----------LQNEASYLILNRYINVGLLCVQEDAADRP  738 (795)
Q Consensus       687 ~~~~~~~~~~~~------------------~~~~~~~id~~----------l~~~~~~~~~~~l~~li~~cL~~dP~~RP  738 (795)
                      ............                  .......+...          -....+......+.++|.+||+.||++||
T Consensus       247 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp  326 (373)
T 1q8y_A          247 DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRA  326 (373)
T ss_dssp             HHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCB
T ss_pred             HHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccC
Confidence            111111111000                  00000000000          00113356677889999999999999999


Q ss_pred             CHHHHHHHH
Q 003786          739 TMFEVVSML  747 (795)
Q Consensus       739 t~~evl~~L  747 (795)
                      |+.|++++-
T Consensus       327 t~~ell~hp  335 (373)
T 1q8y_A          327 DAGGLVNHP  335 (373)
T ss_dssp             CHHHHHTCG
T ss_pred             CHHHHhhCh
Confidence            999999963

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=2.9e-37  Score=333.28  Aligned_cols=244  Identities=22%  Similarity=0.349  Sum_probs=199.7

Q ss_pred             HHccCCccccccCcCCcccEEEeEe-cCcceEEEEEecccCcc------chHHHHHHHHHHHhcC--Ccccceeeeeeee
Q 003786          472 AATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQ------GQEEFKNEIKLIAKLQ--HRNLVRLLGCCIE  542 (795)
Q Consensus       472 ~~~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--h~niv~l~~~~~~  542 (795)
                      ...++|++.+.||+|+||.||+|+. .+++.||||++......      ..+.+.+|+.++++++  ||||+++++++.+
T Consensus        40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~  119 (320)
T 3a99_A           40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER  119 (320)
T ss_dssp             CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred             CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence            3457899999999999999999985 46889999999654322      2356778999999996  5999999999999


Q ss_pred             cceeeEEeecCCC-CChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEEC-CCCCeeeec
Q 003786          543 LEEKILIYEYMPN-KSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLD-KDMNPKISD  620 (795)
Q Consensus       543 ~~~~~lv~E~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~-~~~~vkL~D  620 (795)
                      .+..++|+|++.+ ++|.+++..   ...+++..+..++.||++||.|||+.+   |+||||||+|||++ .++.+||+|
T Consensus       120 ~~~~~lv~e~~~~~~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~kL~D  193 (320)
T 3a99_A          120 PDSFVLILERPEPVQDLFDFITE---RGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLID  193 (320)
T ss_dssp             SSEEEEEEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECC
T ss_pred             CCcEEEEEEcCCCCccHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cEeCCCCHHHEEEeCCCCCEEEee
Confidence            9999999999986 899998854   345889999999999999999999998   99999999999999 789999999


Q ss_pred             cccccccCCCcccccccccccccccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccC
Q 003786          621 FGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLF-SIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKD  699 (795)
Q Consensus       621 FGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~-~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~  699 (795)
                      ||++.......    .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||....    ...       ..
T Consensus       194 fg~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~----~~~-------~~  258 (320)
T 3a99_A          194 FGSGALLKDTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----EII-------RG  258 (320)
T ss_dssp             CTTCEECCSSC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----HHH-------HC
T ss_pred             Ccccccccccc----ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh----hhh-------cc
Confidence            99998765332    234579999999999877665 788999999999999999999986421    000       00


Q ss_pred             cccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          700 DRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       700 ~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                      . .  ...        ...+..+.+++.+||+.||++|||+.||+++.
T Consensus       259 ~-~--~~~--------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp  295 (320)
T 3a99_A          259 Q-V--FFR--------QRVSSECQHLIRWCLALRPSDRPTFEEIQNHP  295 (320)
T ss_dssp             C-C--CCS--------SCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred             c-c--ccc--------ccCCHHHHHHHHHHccCChhhCcCHHHHhcCH
Confidence            0 0  001        11234678899999999999999999999853

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=2.3e-36  Score=330.33  Aligned_cols=262  Identities=21%  Similarity=0.249  Sum_probs=198.5

Q ss_pred             ccCCccccccCcCCcccEEEeEec-Cc-ceEEEEEecccCccchHHHHHHHHHHHhcCCcc------cceeeeeeeecce
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NG-QEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRN------LVRLLGCCIELEE  545 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~  545 (795)
                      .++|++.+.||+|+||.||+|+.. ++ +.||||++... ....+.+.+|+.++++++|++      ++.+++++.....
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~   96 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH   96 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence            478999999999999999999864 34 68999999643 234567889999999998766      8999999999999


Q ss_pred             eeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEE---------------
Q 003786          546 KILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILL---------------  610 (795)
Q Consensus       546 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll---------------  610 (795)
                      .++||||+ +++|.+++... ....+++..+..++.||+.||.|||+++   |+||||||+|||+               
T Consensus        97 ~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~~  171 (355)
T 2eu9_A           97 MCIAFELL-GKNTFEFLKEN-NFQPYPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNSEFETLYNEHKSC  171 (355)
T ss_dssp             EEEEEECC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEESCCCEEEEECCC-CC
T ss_pred             EEEEEecc-CCChHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecccccccccccccc
Confidence            99999999 45555555332 2245889999999999999999999988   9999999999999               


Q ss_pred             ----CCCCCeeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcc
Q 003786          611 ----DKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNS  686 (795)
Q Consensus       611 ----~~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~  686 (795)
                          +.++.+||+|||+++.....     .....||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus       172 ~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~  246 (355)
T 2eu9_A          172 EEKSVKNTSIRVADFGSATFDHEH-----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE  246 (355)
T ss_dssp             CEEEESCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             cccccCCCcEEEeecCcccccccc-----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                56789999999999864322     234579999999999999999999999999999999999999997654322


Q ss_pred             hhH-hHhHhh--------hccCccccc----ccCcc---------------ccchhhHHHHHHHHHHHHhhccCCCCCCC
Q 003786          687 LTL-LGHAWD--------LWKDDRAWE----LIDPT---------------LQNEASYLILNRYINVGLLCVQEDAADRP  738 (795)
Q Consensus       687 ~~~-~~~~~~--------~~~~~~~~~----~id~~---------------l~~~~~~~~~~~l~~li~~cL~~dP~~RP  738 (795)
                      ... ......        .........    ..+..               ........+...+.+++.+||+.||++||
T Consensus       247 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp  326 (355)
T 2eu9_A          247 HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRI  326 (355)
T ss_dssp             HHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSC
T ss_pred             HHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCc
Confidence            111 100000        000000000    00000               00011123455788999999999999999


Q ss_pred             CHHHHHHH
Q 003786          739 TMFEVVSM  746 (795)
Q Consensus       739 t~~evl~~  746 (795)
                      |+.|++++
T Consensus       327 t~~e~l~h  334 (355)
T 2eu9_A          327 TLAEALLH  334 (355)
T ss_dssp             CHHHHTTS
T ss_pred             CHHHHhcC
Confidence            99999875

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=3.1e-36  Score=338.27  Aligned_cols=251  Identities=20%  Similarity=0.290  Sum_probs=188.4

Q ss_pred             ccCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhc-CCcccceeeeeeeecceeeEEeec
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      ..+|++.+.||+|+||.||.....+++.||||++....   ...+.+|+++|+++ +|||||++++++.+....++||||
T Consensus        23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~   99 (432)
T 3p23_A           23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL   99 (432)
T ss_dssp             TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence            35689999999999999766556689999999996532   23467899999999 799999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECC-----CCCeeeecccccccc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDK-----DMNPKISDFGMARIF  627 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~-----~~~vkL~DFGla~~~  627 (795)
                      +. ++|.+++....  ....+..+..++.||++||.|||+++   |+||||||+|||++.     ...+||+|||+++..
T Consensus       100 ~~-g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~  173 (432)
T 3p23_A          100 CA-ATLQEYVEQKD--FAHLGLEPITLLQQTTSGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL  173 (432)
T ss_dssp             CS-EEHHHHHHSSS--CCCCSSCHHHHHHHHHHHHHHHHHTT---CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC
T ss_pred             CC-CCHHHHHHhcC--CCccchhHHHHHHHHHHHHHHHHHCc---CEeCCCCHHHEEEecCCCCCceeEEEecccceeec
Confidence            97 58888885432  23556678899999999999999998   999999999999953     235789999999876


Q ss_pred             CCCcc-cccccccccccccccccccc---cCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCccc
Q 003786          628 GGDEL-QSKTKRIVGTYGYMSPEYAQ---QGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRA  702 (795)
Q Consensus       628 ~~~~~-~~~~~~~~gt~~y~APE~~~---~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~  702 (795)
                      ..... ........||+.|+|||++.   ...++.++|||||||++|||++ |..||...........       .....
T Consensus       174 ~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~-------~~~~~  246 (432)
T 3p23_A          174 AVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANIL-------LGACS  246 (432)
T ss_dssp             ------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHH-------TTCCC
T ss_pred             cCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHH-------hccCC
Confidence            43321 12234467999999999987   4567889999999999999999 8888854332221111       00111


Q ss_pred             ccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          703 WELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       703 ~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .....      ........+.+++.+||+.||++|||+.||+++
T Consensus       247 ~~~~~------~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h  284 (432)
T 3p23_A          247 LDCLH------PEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH  284 (432)
T ss_dssp             CTTSC------TTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             ccccC------ccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence            11111      112234557789999999999999999999965

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=2.8e-36  Score=324.73  Aligned_cols=253  Identities=22%  Similarity=0.338  Sum_probs=180.3

Q ss_pred             HccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCcc-c-hHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQ-G-QEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      ..++|++.+.||+|+||.||+|+.. +++.||||++...... . .+.+.++..+++.++||||+++++++.+.+..++|
T Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv  102 (318)
T 2dyl_A           23 EINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIA  102 (318)
T ss_dssp             CGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEE
Confidence            3478999999999999999999875 6899999999654322 2 23344555678888999999999999999999999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhc-CCCcEEeccCCCCcEEECCCCCeeeeccccccccC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY-SRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      |||+ ++.+..+...  ....+++..+..++.||++||.|||++ +   |+||||||+||+++.++.+||+|||++....
T Consensus       103 ~e~~-~~~~~~l~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~  176 (318)
T 2dyl_A          103 MELM-GTCAEKLKKR--MQGPIPERILGKMTVAIVKALYYLKEKHG---VIHRDVKPSNILLDERGQIKLCDFGISGRLV  176 (318)
T ss_dssp             ECCC-SEEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred             Eecc-CCcHHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHhhCC---EEeCCCCHHHEEECCCCCEEEEECCCchhcc
Confidence            9999 4555554422  234588999999999999999999985 7   9999999999999999999999999997654


Q ss_pred             CCcccccccccccccccccccccc-----cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccc
Q 003786          629 GDELQSKTKRIVGTYGYMSPEYAQ-----QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAW  703 (795)
Q Consensus       629 ~~~~~~~~~~~~gt~~y~APE~~~-----~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~  703 (795)
                      ...   ......||+.|+|||++.     ...++.++|||||||++|||++|+.||......... ....   ..... .
T Consensus       177 ~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~~---~~~~~-~  248 (318)
T 2dyl_A          177 DDK---AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEV-LTKV---LQEEP-P  248 (318)
T ss_dssp             -------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHH-HHHH---HHSCC-C
T ss_pred             CCc---cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHH-HHHH---hccCC-C
Confidence            322   223357899999999984     457899999999999999999999998753322211 1111   01100 0


Q ss_pred             cccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          704 ELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       704 ~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                           .+.  .....+..+.+++.+||+.||.+||++.|++++
T Consensus       249 -----~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  284 (318)
T 2dyl_A          249 -----LLP--GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH  284 (318)
T ss_dssp             -----CCC--SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             -----CCC--ccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence                 000  001123467889999999999999999999885

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=4.6e-37  Score=330.21  Aligned_cols=245  Identities=24%  Similarity=0.384  Sum_probs=191.7

Q ss_pred             HHHccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCcc------chHHHHHHHHHHHhc----CCcccceeeee
Q 003786          471 SAATANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQ------GQEEFKNEIKLIAKL----QHRNLVRLLGC  539 (795)
Q Consensus       471 ~~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l----~h~niv~l~~~  539 (795)
                      ....++|++.+.||+|+||.||+|+.. +++.||||++......      ....+.+|+.++.++    +||||++++++
T Consensus        27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~  106 (312)
T 2iwi_A           27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW  106 (312)
T ss_dssp             ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred             hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence            344678999999999999999999864 5889999999654321      234566899999999    89999999999


Q ss_pred             eeecceeeEEeec-CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEEC-CCCCee
Q 003786          540 CIELEEKILIYEY-MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLD-KDMNPK  617 (795)
Q Consensus       540 ~~~~~~~~lv~E~-~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~-~~~~vk  617 (795)
                      +.+.+..++|+|+ +.+++|.+++..   ...+++..+..++.||++||.|||+.+   |+||||||+||+++ .++.+|
T Consensus       107 ~~~~~~~~~v~e~~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~k  180 (312)
T 2iwi_A          107 FETQEGFMLVLERPLPAQDLFDYITE---KGPLGEGPSRCFFGQVVAAIQHCHSRG---VVHRDIKDENILIDLRRGCAK  180 (312)
T ss_dssp             C-----CEEEEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHHT---EECCCCSGGGEEEETTTTEEE
T ss_pred             EecCCeEEEEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChhhEEEeCCCCeEE
Confidence            9999999999999 789999999854   335899999999999999999999998   99999999999999 889999


Q ss_pred             eeccccccccCCCcccccccccccccccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhh
Q 003786          618 ISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLF-SIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDL  696 (795)
Q Consensus       618 L~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~-~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~  696 (795)
                      |+|||++.......    .....|++.|+|||++.+..+ +.++|||||||++|||++|+.||....    ....     
T Consensus       181 l~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~----~~~~-----  247 (312)
T 2iwi_A          181 LIDFGSGALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ----EILE-----  247 (312)
T ss_dssp             ECCCSSCEECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----HHHH-----
T ss_pred             EEEcchhhhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH----HHhh-----
Confidence            99999998765432    234568999999999877665 569999999999999999999986321    0000     


Q ss_pred             ccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          697 WKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       697 ~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                       ...        .    .+......+.+++.+||+.+|++||++.|++++.
T Consensus       248 -~~~--------~----~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~  285 (312)
T 2iwi_A          248 -AEL--------H----FPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDP  285 (312)
T ss_dssp             -TCC--------C----CCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHST
T ss_pred             -hcc--------C----CcccCCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence             000        0    1112334678899999999999999999999853

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=1.2e-36  Score=352.72  Aligned_cols=264  Identities=25%  Similarity=0.308  Sum_probs=199.7

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEeccc-CccchHHHHHHHHHHHhcCCcccceeeeeeee------cce
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQ-SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIE------LEE  545 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~  545 (795)
                      .++|++.++||+|+||.||+|.+. +++.||||++... .....+.+.+|++++++++||||+++++++..      .+.
T Consensus        13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~   92 (676)
T 3qa8_A           13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL   92 (676)
T ss_dssp             ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred             CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence            478999999999999999999864 5899999998654 33345678999999999999999999998765      677


Q ss_pred             eeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCC---eeeeccc
Q 003786          546 KILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMN---PKISDFG  622 (795)
Q Consensus       546 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~---vkL~DFG  622 (795)
                      .++||||+++++|.+++........+++..+..++.||+.||.|||+.+   |+||||||+||+++.++.   +||+|||
T Consensus        93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g---IVHrDLKP~NILl~~~g~~~~vKL~DFG  169 (676)
T 3qa8_A           93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLG  169 (676)
T ss_dssp             CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT---BCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred             EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEeecCCCceeEEEcccc
Confidence            8999999999999999976555556899999999999999999999998   999999999999997765   8999999


Q ss_pred             cccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHh-----Hhhhc
Q 003786          623 MARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGH-----AWDLW  697 (795)
Q Consensus       623 la~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~-----~~~~~  697 (795)
                      ++.......   ......||+.|+|||++.+..++.++|||||||++|+|++|..||........ ....     .....
T Consensus       170 ~a~~~~~~~---~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~-~~~~i~~~~~~~~~  245 (676)
T 3qa8_A          170 YAKELDQGE---LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQ-WHGKVREKSNEHIV  245 (676)
T ss_dssp             CCCBTTSCC---CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHH-SSTTCC------CC
T ss_pred             ccccccccc---ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhh-hhhhhhcccchhhh
Confidence            998765433   22346799999999999999999999999999999999999999865321100 0000     00000


Q ss_pred             cCccccc--ccCcc--ccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHH
Q 003786          698 KDDRAWE--LIDPT--LQNEASYLILNRYINVGLLCVQEDAADRPTMFEVV  744 (795)
Q Consensus       698 ~~~~~~~--~id~~--l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl  744 (795)
                      .......  .....  .........+..+.+++.+||+.||++|||+.|++
T Consensus       246 ~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL  296 (676)
T 3qa8_A          246 VYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNP  296 (676)
T ss_dssp             SCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCC
T ss_pred             hhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHh
Confidence            0000000  00000  01223344667889999999999999999997743

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=100.00  E-value=7.7e-35  Score=308.98  Aligned_cols=228  Identities=13%  Similarity=0.032  Sum_probs=182.9

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCcc---chHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQ---GQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      .++|++.+.||+|+||.||+|+.. +++.||||++......   ..+.+.+|+.++.+++||||+++++++.+.+..++|
T Consensus        30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv  109 (286)
T 3uqc_A           30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV  109 (286)
T ss_dssp             TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence            367999999999999999999875 4899999999765332   236789999999999999999999999999999999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      |||+++++|.+++..    + ....++..++.||+.||.|||+++   |+||||||+|||++.++.+||++++       
T Consensus       110 ~e~~~g~~L~~~l~~----~-~~~~~~~~i~~ql~~aL~~lH~~g---ivH~Dikp~NIll~~~g~~kl~~~~-------  174 (286)
T 3uqc_A          110 AEWIRGGSLQEVADT----S-PSPVGAIRAMQSLAAAADAAHRAG---VALSIDHPSRVRVSIDGDVVLAYPA-------  174 (286)
T ss_dssp             EECCCEEEHHHHHTT----C-CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEETTSCEEECSCC-------
T ss_pred             EEecCCCCHHHHHhc----C-CChHHHHHHHHHHHHHHHHHHHCC---CccCCCCcccEEEcCCCCEEEEecc-------
Confidence            999999999999832    1 345578899999999999999998   9999999999999999999997443       


Q ss_pred             CcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcc
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT  709 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~  709 (795)
                                     |++|       ++.++|||||||++|||++|+.||...........           ....+...
T Consensus       175 ---------------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~-----------~~~~~~~~  221 (286)
T 3uqc_A          175 ---------------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAP-----------AERDTAGQ  221 (286)
T ss_dssp             ---------------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEE-----------CCBCTTSC
T ss_pred             ---------------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHH-----------HHHHhccC
Confidence                           3333       68999999999999999999999976543221000           00000000


Q ss_pred             c--cchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          710 L--QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       710 l--~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                      .  ........+..+.+++.+||+.||++| |+.|+++.|...
T Consensus       222 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~  263 (286)
T 3uqc_A          222 PIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQA  263 (286)
T ss_dssp             BCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHH
T ss_pred             CCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHH
Confidence            0  011222344578899999999999999 999999999774

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=4.4e-35  Score=348.26  Aligned_cols=237  Identities=21%  Similarity=0.323  Sum_probs=190.5

Q ss_pred             ccCCccccccCcCCcccEEEeEec--CcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecce-----
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL--NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEE-----  545 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-----  545 (795)
                      .++|++.+.||+|+||.||+|++.  +++.||||++.... ....+.+.+|+++|++++||||+++++++.+.+.     
T Consensus        79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~  158 (681)
T 2pzi_A           79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV  158 (681)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence            378999999999999999999875  58899999986542 2344678899999999999999999999988766     


Q ss_pred             eeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccc
Q 003786          546 KILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR  625 (795)
Q Consensus       546 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~  625 (795)
                      .++||||+++++|.+++..     .+++..+..++.||+.||.|||+++   |+||||||+|||++.+ .+||+|||+++
T Consensus       159 ~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~g---iiHrDlkp~NIll~~~-~~kl~DFG~a~  229 (681)
T 2pzi_A          159 GYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEE-QLKLIDLGAVS  229 (681)
T ss_dssp             EEEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSS-CEEECCCTTCE
T ss_pred             eEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHCC---CeecccChHHeEEeCC-cEEEEecccch
Confidence            6999999999999887632     5899999999999999999999998   9999999999999885 99999999998


Q ss_pred             ccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccc
Q 003786          626 IFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWEL  705 (795)
Q Consensus       626 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  705 (795)
                      .....      ....||+.|+|||++.+.. +.++|||||||++|+|++|..|+........                  
T Consensus       230 ~~~~~------~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~------------------  284 (681)
T 2pzi_A          230 RINSF------GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGL------------------  284 (681)
T ss_dssp             ETTCC------SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSC------------------
T ss_pred             hcccC------CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccccc------------------
Confidence            75432      3457999999999987654 8999999999999999999887653111000                  


Q ss_pred             cCccccchhhHHHHHHHHHHHHhhccCCCCCCCC-HHHHHHHHc
Q 003786          706 IDPTLQNEASYLILNRYINVGLLCVQEDAADRPT-MFEVVSMLT  748 (795)
Q Consensus       706 id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt-~~evl~~L~  748 (795)
                       .   ...........+.+++.+||+.||++||+ ++++.+.|.
T Consensus       285 -~---~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~  324 (681)
T 2pzi_A          285 -P---EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLT  324 (681)
T ss_dssp             -C---TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred             -c---ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHH
Confidence             0   01111223457789999999999999995 455555443

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=100.00  E-value=2.2e-35  Score=320.74  Aligned_cols=243  Identities=16%  Similarity=0.133  Sum_probs=186.6

Q ss_pred             ccCCccccccCcCCcccEEEeEecCcceEEEEEecccC--------ccchHHHHHHHHHHHhcC----------------
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQS--------GQGQEEFKNEIKLIAKLQ----------------  529 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~----------------  529 (795)
                      .++|++.++||+|+||.||+|+. +++.||||++....        ....+.+.+|+.+|++++                
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l   97 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL   97 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred             cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence            46799999999999999999987 78999999997642        223478899999999986                


Q ss_pred             ----------Ccccceeeeeeee-------------cceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHH
Q 003786          530 ----------HRNLVRLLGCCIE-------------LEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQG  586 (795)
Q Consensus       530 ----------h~niv~l~~~~~~-------------~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~  586 (795)
                                ||||+++++++.+             ....++||||+++|++.+.+..    ..+++..+..++.||+.|
T Consensus        98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~a  173 (336)
T 2vuw_A           98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTAS  173 (336)
T ss_dssp             EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHH
T ss_pred             cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHH
Confidence                      5566666666554             6789999999999976555522    457899999999999999


Q ss_pred             HHHHH-hcCCCcEEeccCCCCcEEECCCC--------------------CeeeeccccccccCCCccccccccccccccc
Q 003786          587 LLYLH-QYSRLRVIHRDLKASNILLDKDM--------------------NPKISDFGMARIFGGDELQSKTKRIVGTYGY  645 (795)
Q Consensus       587 l~~LH-~~~~~~iiHrDikp~NIll~~~~--------------------~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y  645 (795)
                      |.||| +++   |+||||||+||||+.++                    .+||+|||+++.....       ...||+.|
T Consensus       174 L~~lH~~~~---ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-------~~~gt~~y  243 (336)
T 2vuw_A          174 LAVAEASLR---FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-------IVVFCDVS  243 (336)
T ss_dssp             HHHHHHHHC---CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------EEECCCCT
T ss_pred             HHHHHHhCC---EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------cEEEeecc
Confidence            99999 888   99999999999999887                    8999999999875422       35799999


Q ss_pred             ccccccccCCCCcccchhhHHHH-HHHHHhCCCCCCCCCCcchhHhHhHh-hhccCcccccccCccccchhhHHHHHHHH
Q 003786          646 MSPEYAQQGLFSIKSDVFSFGVL-LLETLSSKRNTDFSNTNSLTLLGHAW-DLWKDDRAWELIDPTLQNEASYLILNRYI  723 (795)
Q Consensus       646 ~APE~~~~~~~~~k~DvwSlGvi-l~elltG~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~id~~l~~~~~~~~~~~l~  723 (795)
                      ||||++.+.. +.++|||||+++ .++++.|..|+...     ....... ......    ..............+..+.
T Consensus       244 ~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~-----~~~~~~~~~~~~~~----~~~~~~~~~~~~~~s~~~~  313 (336)
T 2vuw_A          244 MDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV-----LWLHYLTDKMLKQM----TFKTKCNTPAMKQIKRKIQ  313 (336)
T ss_dssp             TCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH-----HHHHHHHHHHHHTC----CCSSCCCSHHHHHHHHHHH
T ss_pred             cChhhhcCCC-ccceehhhhhCCCCcccccccCCCcch-----hhhhHHHHhhhhhh----ccCcccchhhhhhcCHHHH
Confidence            9999998766 899999998777 77788898887320     0000000 000000    0111112334556778899


Q ss_pred             HHHHhhccCCCCCCCCHHHHH-HH
Q 003786          724 NVGLLCVQEDAADRPTMFEVV-SM  746 (795)
Q Consensus       724 ~li~~cL~~dP~~RPt~~evl-~~  746 (795)
                      +++.+||+.|     |++|++ +|
T Consensus       314 dli~~~L~~d-----sa~e~l~~H  332 (336)
T 2vuw_A          314 EFHRTMLNFS-----SATDLLCQH  332 (336)
T ss_dssp             HHHHHGGGSS-----SHHHHHHHC
T ss_pred             HHHHHHhccC-----CHHHHHhcC
Confidence            9999999976     999998 64

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=3.3e-34  Score=306.15  Aligned_cols=232  Identities=18%  Similarity=0.227  Sum_probs=180.2

Q ss_pred             ccCCccc-cccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHH-HhcCCcccceeeeeeee----ccee
Q 003786          474 TANFSTE-NKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLI-AKLQHRNLVRLLGCCIE----LEEK  546 (795)
Q Consensus       474 ~~~~~~~-~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~----~~~~  546 (795)
                      .++|.+. +.||+|+||.||+++.. +++.||||++..     ...+.+|+.++ +.++||||+++++++..    ....
T Consensus        16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~   90 (299)
T 3m2w_A           16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL   90 (299)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence            3667776 78999999999999864 688999999853     35678899988 56689999999999887    6778


Q ss_pred             eEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECC---CCCeeeecccc
Q 003786          547 ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDK---DMNPKISDFGM  623 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~---~~~vkL~DFGl  623 (795)
                      ++||||+++++|.+++.... ...+++..+..++.||+.||.|||+++   |+||||||+|||++.   ++.+||+|||+
T Consensus        91 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~  166 (299)
T 3m2w_A           91 LIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGF  166 (299)
T ss_dssp             EEEECCCCSCBHHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTT
T ss_pred             EEEEeecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEecCCCCCcEEEecccc
Confidence            99999999999999986532 345889999999999999999999998   999999999999998   78999999999


Q ss_pred             ccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccc
Q 003786          624 ARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAW  703 (795)
Q Consensus       624 a~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~  703 (795)
                      +....                        +..++.++|||||||++|||++|+.||..........     .. .  ...
T Consensus       167 a~~~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~-----~~-~--~~~  214 (299)
T 3m2w_A          167 AKETT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP-----GM-K--TRI  214 (299)
T ss_dssp             CEECT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------C-----CS-C--CSS
T ss_pred             ccccc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhH-----HH-H--HHH
Confidence            86432                        2456789999999999999999999986543221100     00 0  000


Q ss_pred             cccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          704 ELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       704 ~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ...............+..+.+++.+||+.||++|||+.|++++
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h  257 (299)
T 3m2w_A          215 RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  257 (299)
T ss_dssp             CTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             hhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence            0000001111112345678899999999999999999999986

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=100.00  E-value=1.6e-34  Score=322.88  Aligned_cols=243  Identities=14%  Similarity=0.159  Sum_probs=179.7

Q ss_pred             HccCCccccccCcCCcccEEEeEe-cCcceEEEEEecccC---ccchHHHHHHHHHHHhcCC-cccceee----------
Q 003786          473 ATANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQH-RNLVRLL----------  537 (795)
Q Consensus       473 ~~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h-~niv~l~----------  537 (795)
                      ...+|...+.||+|+||.||+|++ .+|+.||||++....   ....+.+++|+.+++.++| +|...+.          
T Consensus        76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~  155 (413)
T 3dzo_A           76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD  155 (413)
T ss_dssp             CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred             CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence            345688889999999999999985 468999999987432   2336789999999999987 3221111          


Q ss_pred             -----------eeeee-----cceeeEEeecCCCCChhhhhhc----cCCcccCChhhHHHHHHHHHHHHHHHHhcCCCc
Q 003786          538 -----------GCCIE-----LEEKILIYEYMPNKSLDFFLFD----STKENLLGWGTRVRIIEGIAQGLLYLHQYSRLR  597 (795)
Q Consensus       538 -----------~~~~~-----~~~~~lv~E~~~~gsL~~~l~~----~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~  597 (795)
                                 .++..     ....+++|++ .+++|.+++..    ......+++..+..++.||++||.|||+++   
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---  231 (413)
T 3dzo_A          156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPR-MQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---  231 (413)
T ss_dssp             EEECCC---------------CCSEEEEEEC-CSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---
T ss_pred             hcccCCCCccccccCCCccccccceEEEeeh-hcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC---
Confidence                       11111     1234556665 46788888731    223455788899999999999999999998   


Q ss_pred             EEeccCCCCcEEECCCCCeeeeccccccccCCCccccccccccccccccccccc----------ccCCCCcccchhhHHH
Q 003786          598 VIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYA----------QQGLFSIKSDVFSFGV  667 (795)
Q Consensus       598 iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~----------~~~~~~~k~DvwSlGv  667 (795)
                      |+||||||+||||+.++.+||+|||+++.....     .....| +.|+|||++          ....++.++|||||||
T Consensus       232 iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGv  305 (413)
T 3dzo_A          232 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGL  305 (413)
T ss_dssp             EECSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHH
T ss_pred             cccCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHH
Confidence            999999999999999999999999998864322     344577 999999998          5567899999999999


Q ss_pred             HHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 003786          668 LLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVS  745 (795)
Q Consensus       668 il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  745 (795)
                      ++|||++|+.||..........              ..+...  .    ..+..+.+++.+||+.||++||++.++++
T Consensus       306 il~elltg~~Pf~~~~~~~~~~--------------~~~~~~--~----~~~~~~~~li~~~l~~dP~~Rpt~~~~l~  363 (413)
T 3dzo_A          306 AIYWIWCADLPNTDDAALGGSE--------------WIFRSC--K----NIPQPVRALLEGFLRYPKEDRLLPLQAME  363 (413)
T ss_dssp             HHHHHHHSSCCCCTTGGGSCSG--------------GGGSSC--C----CCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHCCCCCCCcchhhhHH--------------HHHhhc--c----cCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            9999999999996543211100              000000  0    12356889999999999999999877755

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.95  E-value=4e-29  Score=289.19  Aligned_cols=183  Identities=17%  Similarity=0.159  Sum_probs=129.7

Q ss_pred             ccCcCCcccEEEeE-ecCcceEEEEEecccC----------ccchHHHHHHHHHHHhc-CCcccceeeeeeeecceeeEE
Q 003786          482 KLGEGGFGPVYKGR-LLNGQEVAVKRLSSQS----------GQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       482 ~LG~G~~g~Vy~~~-~~~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv  549 (795)
                      .++.|++|.+..++ .-.|+.+|+|++.+..          ....++|.+|+++|+++ .|+||+++++++.++...|||
T Consensus       241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV  320 (569)
T 4azs_A          241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV  320 (569)
T ss_dssp             C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred             ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence            46777787777765 3458999999996542          12335789999999999 799999999999999999999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      |||++|++|.++|...   +.++.   .+|+.||+.||+|||++|   ||||||||+||||+.+|.+||+|||+|+....
T Consensus       321 MEyv~G~~L~d~i~~~---~~l~~---~~I~~QIl~AL~ylH~~G---IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~  391 (569)
T 4azs_A          321 MEKLPGRLLSDMLAAG---EEIDR---EKILGSLLRSLAALEKQG---FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ  391 (569)
T ss_dssp             EECCCSEEHHHHHHTT---CCCCH---HHHHHHHHHHHHHHHHTT---CEESCCCGGGEEECTTSCEEECCCTTEESCC-
T ss_pred             EecCCCCcHHHHHHhC---CCCCH---HHHHHHHHHHHHHHHHCC---ceeccCchHhEEECCCCCEEEeecccCeeCCC
Confidence            9999999999999543   33443   368999999999999998   99999999999999999999999999987653


Q ss_pred             CcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCC
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSK  676 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~  676 (795)
                      ..  ......+||+.|||||++.+ .+..++|+||+|+++++|.++.
T Consensus       392 ~~--~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~  435 (569)
T 4azs_A          392 DC--SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPW  435 (569)
T ss_dssp             ----CCSHHHHHHHHHHHHHHC------------------CCCCTTH
T ss_pred             CC--ccccCceechhhccHHHhCC-CCCCcccccccccchhhhcccc
Confidence            32  23345789999999999875 4677899999999998887654

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.92  E-value=1.1e-25  Score=258.92  Aligned_cols=185  Identities=20%  Similarity=0.242  Sum_probs=146.2

Q ss_pred             ccccccCcCCcccEEEeEecCcceEEEEEecccCcc--------chHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          478 STENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQ--------GQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       478 ~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      ...+.||+|+||.||+++. .++.+++|+.......        ..+++.+|+++|++++||||+++..++...+..++|
T Consensus       339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV  417 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM  417 (540)
T ss_dssp             ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred             CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence            4467899999999999954 5788999986543211        134578999999999999999777777788888999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      |||+++++|.+++..           +..++.||++||.|||+++   |+||||||+|||++.  .+||+|||+++....
T Consensus       418 mE~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~~g---IiHrDiKp~NILl~~--~~kL~DFGla~~~~~  481 (540)
T 3en9_A          418 MSYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHKND---VIHNDLTTSNFIFDK--DLYIIDFGLGKISNL  481 (540)
T ss_dssp             EECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHHTT---EECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred             EECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHHCc---CccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence            999999999999843           5589999999999999998   999999999999998  999999999998754


Q ss_pred             Ccccc-----ccccccccccccccccccc--CCCCcccchhhHHHHHHHHHhCCCCC
Q 003786          630 DELQS-----KTKRIVGTYGYMSPEYAQQ--GLFSIKSDVFSFGVLLLETLSSKRNT  679 (795)
Q Consensus       630 ~~~~~-----~~~~~~gt~~y~APE~~~~--~~~~~k~DvwSlGvil~elltG~~p~  679 (795)
                      .....     ......||+.|||||++..  ..|+.++|+|+..+-..+.+.++.++
T Consensus       482 ~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          482 DEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             ccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence            32211     1245789999999999987  67888999999999988888776544

>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*

Probab=99.89  E-value=5.5e-23  Score=181.43  Aligned_cols=105  Identities=17%  Similarity=0.365  Sum_probs=93.1

Q ss_pred             cccCCCCCccCCCCeEEeCCCeEEEEEeCCCCCCceEEEEEeccCCCeEEEecCCCCCCccCcceEEEeeCCceEEeCCC
Q 003786           25 ADNITPSRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPDTIVWVANRNSPIFDSNAVLTISNGGKLVLLNQT  104 (795)
Q Consensus        25 ~~~l~~~~~l~~~~~l~s~~g~f~lgf~~~~~~~~~~~~iw~~~~~~t~vW~an~~~p~~~~~~~l~~~~~g~lvl~~~~  104 (795)
                      .|+|.+||.|.+||+|.|  |.|.|.|+.+|+     +.++..   .++||+|||+.|. ...+.|+|+.||||||+|++
T Consensus         1 kn~L~~g~~L~~g~~L~s--g~y~l~~q~DgN-----Lvly~~---~~~vW~ant~~~~-~~~~~L~l~~dGnLvL~d~~   69 (105)
T 4h3o_A            1 RNILDNNEGLYAGQSLDV--EPYHFIMQDDCN-----LVLYDH---STSTWASNTEIGG-KSGCSAVLQSDGNFVVYDSS   69 (105)
T ss_dssp             CCEECTTEEECTTCEEEE--TTEEEEECTTSC-----EEEEET---TEEEEECCCCCTT-CCSCEEEECTTSCEEEECTT
T ss_pred             CCCcCCCCEEcCCCEEEE--CCEEEEECCCCe-----EEEEEC---CEEEEEecCCCCC-CccEEEEEeCCccEEEECCC
Confidence            378999999999999998  889999999987     667654   4999999999997 44689999999999999999


Q ss_pred             CceEEeecCCCCccccEEEEccCCCeEEeecCCCCCcccceecc
Q 003786          105 NGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQS  148 (795)
Q Consensus       105 ~~~~Wst~~~~~~~~~~a~l~d~GNlvl~~~~~~~~~~~~~WqS  148 (795)
                      +.+||+|++.+....+.|+|+|||||||++        ..||||
T Consensus        70 ~~~vWss~t~~~~~~~~l~L~ddGNlVly~--------~~~W~S  105 (105)
T 4h3o_A           70 GRSLWASHSTRGSGNYILILQDDGNVIIYG--------SDIWST  105 (105)
T ss_dssp             CCEEEECCCCCCSSCEEEEECTTSCEEEEE--------SEEEEC
T ss_pred             cEEEEEecCCCCCCCEEEEEeCCCeEEEEC--------CcEecC
Confidence            999999998876667789999999999996        259998

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.88  E-value=6.7e-23  Score=216.21  Aligned_cols=152  Identities=17%  Similarity=0.137  Sum_probs=123.1

Q ss_pred             hHHHHccCCccccccCcCCcccEEEeEecCcceEEEEEecccCc------------------cchHHHHHHHHHHHhcCC
Q 003786          469 SVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSG------------------QGQEEFKNEIKLIAKLQH  530 (795)
Q Consensus       469 ~i~~~~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l~h  530 (795)
                      .+......|++.+.||+|+||.||+|+..+|+.||||+++....                  .....+.+|+.+|++++ 
T Consensus        84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~-  162 (282)
T 1zar_A           84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-  162 (282)
T ss_dssp             HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-
T ss_pred             HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-
Confidence            34445566788899999999999999987799999999964321                  12456889999999999 


Q ss_pred             cccceeeeeeeecceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEE
Q 003786          531 RNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILL  610 (795)
Q Consensus       531 ~niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll  610 (795)
                       | +++++++ +.+..++||||+++++|.+ +         .......++.||++||.|||+.+   |+||||||+|||+
T Consensus       163 -~-~~v~~~~-~~~~~~lvmE~~~g~~L~~-l---------~~~~~~~i~~qi~~~l~~lH~~g---iiHrDlkp~NILl  226 (282)
T 1zar_A          163 -G-LAVPKVY-AWEGNAVLMELIDAKELYR-V---------RVENPDEVLDMILEEVAKFYHRG---IVHGDLSQYNVLV  226 (282)
T ss_dssp             -T-SSSCCEE-EEETTEEEEECCCCEEGGG-C---------CCSCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEE
T ss_pred             -C-CCcCeEE-eccceEEEEEecCCCcHHH-c---------chhhHHHHHHHHHHHHHHHHHCC---CEeCCCCHHHEEE
Confidence             5 6777755 3466799999999999977 4         12345679999999999999998   9999999999999


Q ss_pred             CCCCCeeeeccccccccCCCccccccccccccccccccccccc
Q 003786          611 DKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQ  653 (795)
Q Consensus       611 ~~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~  653 (795)
                      + ++.+||+|||+++.               +..++|||++..
T Consensus       227 ~-~~~vkl~DFG~a~~---------------~~~~~a~e~l~r  253 (282)
T 1zar_A          227 S-EEGIWIIDFPQSVE---------------VGEEGWREILER  253 (282)
T ss_dssp             E-TTEEEECCCTTCEE---------------TTSTTHHHHHHH
T ss_pred             E-CCcEEEEECCCCeE---------------CCCCCHHHHHHH
Confidence            9 99999999999863               345688998753

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*

Probab=99.87  E-value=7.1e-22  Score=176.26  Aligned_cols=110  Identities=22%  Similarity=0.422  Sum_probs=96.6

Q ss_pred             cccCCCCCccCCCCeEEeCCCeEEEEEeCCCCCCceEEEEEeccCCCeEEEecCCCCCCccCcceEEEeeCCceEEeCCC
Q 003786           25 ADNITPSRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPDTIVWVANRNSPIFDSNAVLTISNGGKLVLLNQT  104 (795)
Q Consensus        25 ~~~l~~~~~l~~~~~l~s~~g~f~lgf~~~~~~~~~~~~iw~~~~~~t~vW~an~~~p~~~~~~~l~~~~~g~lvl~~~~  104 (795)
                      +|+|.+||.|.+|++|+ ++|.|+|+|+.+|+     + ++|+  ..++||.||++.|  +..+.|.|+.||||||+|.+
T Consensus         1 ~d~l~~g~~L~~g~~l~-~~~~~~l~~~~dGn-----l-vl~~--~~~~vW~sn~~~~--~~~~~l~l~~dGNLVl~~~~   69 (110)
T 3a0c_A            1 VNSLSSPNSLFTGHSLE-VGPSYRLIMQGDCN-----F-VLYD--SGKPVWASNTGGL--GSGCRLTLHNNGNLVIYDQS   69 (110)
T ss_dssp             CCEEETTCEECTTCEEE-ETTTEEEEECTTSC-----E-EEEE--TTEEEEECCCTTS--CSSCEEEECTTSCEEEECTT
T ss_pred             CCEeCCCCEECCCCEEE-ECCCEEEEEcCCCc-----E-EEEE--CCEEEEECCCCCC--CCcEEEEEeCCCCEEEECCC
Confidence            48999999999999999 99999999999886     2 6676  3799999999877  44689999999999999999


Q ss_pred             CceEEeecCCCCccccEEEEccCCCeEEeecCCCCCcccceecccCCCc
Q 003786          105 NGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQSFDHPS  153 (795)
Q Consensus       105 ~~~~Wst~~~~~~~~~~a~l~d~GNlvl~~~~~~~~~~~~~WqSFd~PT  153 (795)
                      +.++|+|++........++|+|+|||||++     .   ++||||+||.
T Consensus        70 ~~~~W~S~t~~~~g~~~l~l~~dGnlvl~~-----~---~~W~S~~~~~  110 (110)
T 3a0c_A           70 NRVIWQTKTNGKEDHYVLVLQQDRNVVIYG-----P---VVWATGSGPA  110 (110)
T ss_dssp             CCEEEECCCCCSSSCCEEEECTTSCEEEEC-----S---EEEECSCCC-
T ss_pred             CcEEEecCCCCCCCCEEEEEeCCccEEEEC-----C---CEecCCCcCC
Confidence            999999998866667788999999999996     2   7999999983

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1

Probab=99.87  E-value=1.2e-21  Score=176.97  Aligned_cols=108  Identities=18%  Similarity=0.332  Sum_probs=95.9

Q ss_pred             cccccCCCCCccCCCCeEE--eCCCeEEEEEeCCCCCCceEEEEEeccCCCeEEEecCCCCCCccCcceEEEeeCCceEE
Q 003786           23 IAADNITPSRFIRDGEKLV--SSSQRFELGFFSPGKSKYRYLGIWYKQIPDTIVWVANRNSPIFDSNAVLTISNGGKLVL  100 (795)
Q Consensus        23 ~~~~~l~~~~~l~~~~~l~--s~~g~f~lgf~~~~~~~~~~~~iw~~~~~~t~vW~an~~~p~~~~~~~l~~~~~g~lvl  100 (795)
                      ++.|+|.+||+|.+|++|+  |++|.|+|+|+.+|+      -+||++  +++||+||++.|  +.++.|+|+.||||||
T Consensus         6 ~~~~~l~~g~~L~~g~~l~~~S~~g~~~L~~~~dgn------lvly~~--~~~vW~sn~~~~--~~~~~l~l~~dGNLVl   75 (119)
T 1b2p_A            6 SKQPDDNHPQILHATESLEILFGTHVYRFIMQTDCN------LVLYDN--NNPIWATNTGGL--GNGCRAVLQPDGVLVV   75 (119)
T ss_dssp             CSCSSSCCCCEEETTCEEEEEETTEEEEEEECTTSC------EEEEET--TEEEEECCCTTS--CSSCEEEECTTSCEEE
T ss_pred             ecCcccCCCCEEcCCCEEEEeCCCCCEEEEEecCCC------EEEEEC--CEEEEeCCCccC--CCceEEEEccCCEEEE
Confidence            5679999999999999999  999999999999886      257876  799999999877  4568999999999999


Q ss_pred             eCCCCceEEeecCCCCccccEEEEccCCCeEEeecCCCCCcccceecc
Q 003786          101 LNQTNGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQS  148 (795)
Q Consensus       101 ~~~~~~~~Wst~~~~~~~~~~a~l~d~GNlvl~~~~~~~~~~~~~WqS  148 (795)
                      +|.++.++|+|++........++|+|+|||||++        .++|||
T Consensus        76 ~d~~~~~lW~S~~~~~~g~~~l~l~~~Gnlvl~~--------~~~W~S  115 (119)
T 1b2p_A           76 ITNENVTVWQSPVAGKAGHYVLVLQPDRNVVIYG--------DALWAT  115 (119)
T ss_dssp             ECTTCCEEEECSCCCCSSCEEEEECTTSCEEEEE--------SEEEEC
T ss_pred             EeCCCcEEEcCCCCCCCCCEEEEEECCCcEEEEC--------ccEeCC
Confidence            9999999999998765566788999999999996        279997

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*

Probab=99.84  E-value=6.4e-21  Score=171.76  Aligned_cols=110  Identities=18%  Similarity=0.349  Sum_probs=94.6

Q ss_pred             cccCCCCCccCCCCeEEeCCCeEEEEEeCCCCCCceEEEEEeccCCCeEEEecCCCCCCccCcceEEEeeCCceEEeCCC
Q 003786           25 ADNITPSRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPDTIVWVANRNSPIFDSNAVLTISNGGKLVLLNQT  104 (795)
Q Consensus        25 ~~~l~~~~~l~~~~~l~s~~g~f~lgf~~~~~~~~~~~~iw~~~~~~t~vW~an~~~p~~~~~~~l~~~~~g~lvl~~~~  104 (795)
                      .|||.+||+|.+|++|+  +|.|+|+|+.+|+     + ++|+  ..++||+||++.|  +.++.|.|+.||||||+|.+
T Consensus         2 ~dtl~~gq~L~~g~~L~--~g~~~L~~~~dgn-----l-vly~--~~~~vW~sn~~~~--~~~~~l~l~~~GnLvl~d~~   69 (115)
T 2dpf_A            2 DNVLLSGQTLHADHSLQ--AGAYTLTIQNKCN-----L-VKYQ--NGRQIWASNTDRR--GSGCRLTLLSDGNLVIYDHN   69 (115)
T ss_dssp             CCEEETTCEEETTEEEE--ETTEEEEECTTSC-----E-EEEE--TTEEEEECSCTTS--CSSCEEEECTTSCEEEECTT
T ss_pred             CCEeCCCCEECCCCEEE--CCCEEEEEcCCCc-----E-EEEe--CCEEEEeCCCCCC--CCceEEEECCCCcEEEECCC
Confidence            48999999999999998  7999999998885     2 2354  3799999999988  34689999999999999998


Q ss_pred             CceEEeecCCCCccccEEEEccCCCeEEeecCCCCCcccceecccCCCch
Q 003786          105 NGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQSFDHPSD  154 (795)
Q Consensus       105 ~~~~Wst~~~~~~~~~~a~l~d~GNlvl~~~~~~~~~~~~~WqSFd~PTD  154 (795)
                      +.++|+|++........++|+|+|||||++     .   ++||||.+++.
T Consensus        70 ~~~vW~S~~~~~~g~~~l~l~~dGnlvl~~-----~---~~W~S~~~~~~  111 (115)
T 2dpf_A           70 NNDVWGSACWGDNGKYALVLQKDGRFVIYG-----P---VLWSLGPNGCR  111 (115)
T ss_dssp             CCEEEECCCCCSSSCCEEEECTTSCEEEEC-----S---EEECSSTTCBC
T ss_pred             ceEEEEcCCCCCCCCEEEEEeCCCeEEEEC-----C---CEEECCCCCCc
Confidence            999999998755556788999999999995     2   79999998764

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A

Probab=99.84  E-value=6.6e-21  Score=170.88  Aligned_cols=110  Identities=25%  Similarity=0.466  Sum_probs=94.5

Q ss_pred             cccCCCCCccCCCCeEEeCCCeEEEEEeCCCCCCceEEEEEeccCCCeEEEecCCCCCCccCcceEEEeeCCceEEeCCC
Q 003786           25 ADNITPSRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPDTIVWVANRNSPIFDSNAVLTISNGGKLVLLNQT  104 (795)
Q Consensus        25 ~~~l~~~~~l~~~~~l~s~~g~f~lgf~~~~~~~~~~~~iw~~~~~~t~vW~an~~~p~~~~~~~l~~~~~g~lvl~~~~  104 (795)
                      +|||.+||.|.+|++|  ++|.|+|+|+.+|+     + ++|++  .++||+||++.+  +.++.|.|+.||||||+| +
T Consensus         1 tdtl~~gq~L~~g~~L--~~~~~~L~~~~dgn-----l-vl~~~--~~~vW~sn~~~~--~~~~~l~l~~~GNLvl~d-~   67 (112)
T 1xd5_A            1 SDRLNSGHQLDTGGSL--AEGGYLFIIQNDCN-----L-VLYDN--NRAVWASGTNGK--ASGCVLKMQNDGNLVIYS-G   67 (112)
T ss_dssp             CCEEETTEEECTTCEE--EETTEEEEECTTSC-----E-EEEET--TEEEEECCCTTS--CSSEEEEECTTSCEEEEE-T
T ss_pred             CCCCCCCCEECCCCEE--eCCCEEEEEcCCCc-----E-EEEEC--CEEEEeCCCcCC--CCCEEEEEeCCCCEEEEc-C
Confidence            4899999999999999  47999999999986     2 45665  699999999764  456899999999999999 8


Q ss_pred             CceEEeecCCCCccccEEEEccCCCeEEeecCCCCCcccceecccCCC
Q 003786          105 NGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQSFDHP  152 (795)
Q Consensus       105 ~~~~Wst~~~~~~~~~~a~l~d~GNlvl~~~~~~~~~~~~~WqSFd~P  152 (795)
                      +.++|+|.+......+.++|+++|||||++     ..+.++||||++.
T Consensus        68 ~~~~W~S~~~~~~g~~~l~l~~dGnlvl~~-----~~~~~~W~S~~~~  110 (112)
T 1xd5_A           68 SRAIWASNTNRQNGNYYLILQRDRNVVIYD-----NSNNAIWATHTNV  110 (112)
T ss_dssp             TEEEEECCCCCSCCCCEEEECTTSCEEEEC-----TTSCEEEECCCCC
T ss_pred             CEEEEECCccCCCCCEEEEEeCCCcEEEEC-----CCCceEEECCCcc
Confidence            889999998766566788999999999997     3467999999985

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*

Probab=99.82  E-value=4.8e-20  Score=164.20  Aligned_cols=105  Identities=25%  Similarity=0.394  Sum_probs=89.9

Q ss_pred             cccCCCCCccCCCCeEEeCCCeEEEEEeCCCCCCceEEEEEeccCCCeEEEecCCCCCCccCcceEEEeeCCceEEeCCC
Q 003786           25 ADNITPSRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPDTIVWVANRNSPIFDSNAVLTISNGGKLVLLNQT  104 (795)
Q Consensus        25 ~~~l~~~~~l~~~~~l~s~~g~f~lgf~~~~~~~~~~~~iw~~~~~~t~vW~an~~~p~~~~~~~l~~~~~g~lvl~~~~  104 (795)
                      .+||.|||.|.+|+.|+  +|.|+|+|+.+|+     +.+ |..  .++||++|++.+  +..+.|.|+.||||||+|.+
T Consensus         1 ~ntL~~gq~L~~g~~L~--~g~~~L~~q~dGn-----Lvl-y~~--~~~vW~snt~~~--~~~~~l~l~~dGNLvl~~~~   68 (109)
T 3dzw_A            1 DNILYSGETLSPGEFLN--NGRYVFIMQEDCN-----LVL-YDV--DKPIWATNTGGL--DRRCHLSMQSDGNLVVYSPR   68 (109)
T ss_dssp             CCEEETTEEECTTCEEE--ETTEEEEECTTSC-----EEE-EET--TEEEEECCCTTS--SSSCEEEECTTSCEEEECTT
T ss_pred             CCCcCCCCEeCCCCEEE--CCCEEEEEcCCCc-----EEE-EeC--CEEEEECCcccC--CCCEEEEEeCCCCEEEECCC
Confidence            37899999999999997  6999999999886     333 544  699999999876  45689999999999999999


Q ss_pred             CceEEeecCCCCccccEEEEccCCCeEEeecCCCCCcccceeccc
Q 003786          105 NGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQSF  149 (795)
Q Consensus       105 ~~~~Wst~~~~~~~~~~a~l~d~GNlvl~~~~~~~~~~~~~WqSF  149 (795)
                      +.++|+|++.+....+.|+|+||||||||+        .++|||=
T Consensus        69 ~~~~W~S~t~~~~~~~~~~L~ddGNlvly~--------~~~W~s~  105 (109)
T 3dzw_A           69 NNPIWASNTGGENGNYVCVLQKDRNVVIYG--------TARWATG  105 (109)
T ss_dssp             SCEEEECCCCCSSSCEEEEECTTSCEEEEE--------SCCCCCC
T ss_pred             CCEEEECCCCCCCCCEEEEEeCCCEEEEEC--------CCEEeCC
Confidence            999999998765556789999999999996        2799983

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=99.79  E-value=2.7e-19  Score=159.29  Aligned_cols=105  Identities=19%  Similarity=0.321  Sum_probs=89.3

Q ss_pred             cccccCCCCCccCCCCeEEeCCCeEEEEEeCCCCCCceEEEEEeccCCCeEEEecCCCCCCccCcceEEEeeCCceEEeC
Q 003786           23 IAADNITPSRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPDTIVWVANRNSPIFDSNAVLTISNGGKLVLLN  102 (795)
Q Consensus        23 ~~~~~l~~~~~l~~~~~l~s~~g~f~lgf~~~~~~~~~~~~iw~~~~~~t~vW~an~~~p~~~~~~~l~~~~~g~lvl~~  102 (795)
                      +|.|||.|||.|.+|+.|+|  |.|.|.|+.+|+     +.+ |..   ++||++|++..  +..+.|.|+.||||||+|
T Consensus         4 ~~~dtL~~gq~L~~g~~L~s--g~~~L~~q~dGn-----Lvl-~~~---~~vW~snt~~~--~~~~~l~l~~dGNLvl~d   70 (110)
T 3r0e_B            4 FTNNLLFSGQVLYGDGRLTA--KNHQLVMQGDCN-----LVL-YGG---KYGWQSNTHGN--GEHCFLRLNHKGELIIKD   70 (110)
T ss_dssp             CBTTEEETTCEEETTEEEEC--SSCEEEECTTSC-----EEE-ECS---SSCEECCCTTS--SSSCEEEECTTSCEEEEC
T ss_pred             cccCEECCCCEecCCCEEEe--CCEEEEEcCCCe-----EEE-ECC---eEEEECCCcCC--CcCEEEEEeCCCcEEEEe
Confidence            68899999999999999998  569998888775     444 554   58999999863  456899999999999999


Q ss_pred             CCCceEEeecCCCCccccEEEEccCCCeEEeecCCCCCcccceecc
Q 003786          103 QTNGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQS  148 (795)
Q Consensus       103 ~~~~~~Wst~~~~~~~~~~a~l~d~GNlvl~~~~~~~~~~~~~WqS  148 (795)
                      .++.++|+|++.+......|+|+||||||||+        ..+|+|
T Consensus        71 ~~~~~iW~S~t~~~~~~~~~~L~~dGNlvly~--------~~~W~t  108 (110)
T 3r0e_B           71 DDFKTIWSSRSSSKQGEYVLILQDDGFGVIYG--------PAIFET  108 (110)
T ss_dssp             TTCCEEEECCCCCSSSCCEEEECTTSCEEEEC--------SEEEES
T ss_pred             CCCCEEEEcCCcCCCCCEEEEEcCCccEEEec--------CCEecC
Confidence            99999999998765455789999999999996        379987

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=99.77  E-value=1.7e-18  Score=155.07  Aligned_cols=108  Identities=18%  Similarity=0.278  Sum_probs=91.9

Q ss_pred             cccccCCCCCccCCCCeEEeCCCeEEEEEeCCCCCCceEEEEEeccCCCeEEEecCCCCCCccCcceEEEeeCCceEEeC
Q 003786           23 IAADNITPSRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPDTIVWVANRNSPIFDSNAVLTISNGGKLVLLN  102 (795)
Q Consensus        23 ~~~~~l~~~~~l~~~~~l~s~~g~f~lgf~~~~~~~~~~~~iw~~~~~~t~vW~an~~~p~~~~~~~l~~~~~g~lvl~~  102 (795)
                      ++.|+|.+||.|.+|+.|.+  |.|.|.|+.+|+     |.++.. -..++||.+|+..+  +..+.|.|+.||||||+|
T Consensus         4 ~~~~tL~~gq~L~~g~~L~~--g~~~L~~q~dGN-----LvL~~~-~~~~~vWssnt~~~--~~~~~l~l~~dGNLVl~d   73 (113)
T 3mez_B            4 RVRNVLFSSQVMYDNAQLAT--RDYSLVMRDDCN-----LVLTKG-SKTNIVWESGTSGR--GQHCFMRLGHSGELDITD   73 (113)
T ss_dssp             CCSSEEETTCEEETTCEEEE--TTEEEEECTTSC-----EEEEET-TTTEEEEECCCTTS--CSSCEEEECTTSCEEEEC
T ss_pred             ccCCEeCCCCEECCCCEeEc--CCEEEEEcCCCE-----EEEEEC-CCCEEEEECCcccC--CcCEEEEEeCCCcEEEEC
Confidence            46799999999999999986  889999998886     555432 14689999999876  446899999999999999


Q ss_pred             CCCceEEeecCCCCccccEEEEccCCCeEEeecCCCCCcccceecc
Q 003786          103 QTNGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQS  148 (795)
Q Consensus       103 ~~~~~~Wst~~~~~~~~~~a~l~d~GNlvl~~~~~~~~~~~~~WqS  148 (795)
                      .++.++|+|++.+....+.|+|+||||||||+        ..||+|
T Consensus        74 ~~~~~iW~S~t~~~~~~~~~~L~~dGnlvly~--------~~~W~s  111 (113)
T 3mez_B           74 DRLNTVFVSNTVGQEGDYVLILQINGQAVVYG--------PAVWST  111 (113)
T ss_dssp             TTSCEEEECSCCCSSSCCEEEECTTSCEEEEC--------SEEEES
T ss_pred             CCCCEEEECCCcCCCCCEEEEEcCCceEEEec--------CCEecC
Confidence            99999999998765555789999999999995        479987

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.76  E-value=1.2e-18  Score=181.21  Aligned_cols=137  Identities=15%  Similarity=0.171  Sum_probs=107.5

Q ss_pred             CCccccccCcCCcccEEEeEe-cCcce--EEEEEecccCcc------------------------chHHHHHHHHHHHhc
Q 003786          476 NFSTENKLGEGGFGPVYKGRL-LNGQE--VAVKRLSSQSGQ------------------------GQEEFKNEIKLIAKL  528 (795)
Q Consensus       476 ~~~~~~~LG~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l  528 (795)
                      -|++.+.||+|+||.||+|+. .+|+.  ||||++......                        ....+.+|+.+|.++
T Consensus        48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l  127 (258)
T 1zth_A           48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA  127 (258)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred             chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence            367889999999999999987 67888  999987543111                        013578999999999


Q ss_pred             CCccc--ceeeeeeeecceeeEEeecCCC-C----ChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHH-hcCCCcEEe
Q 003786          529 QHRNL--VRLLGCCIELEEKILIYEYMPN-K----SLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH-QYSRLRVIH  600 (795)
Q Consensus       529 ~h~ni--v~l~~~~~~~~~~~lv~E~~~~-g----sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH-~~~~~~iiH  600 (795)
                      +|+++  ..++..    ...++||||+.+ |    +|.+....      .++..+..++.||+.+|.||| +.+   |+|
T Consensus       128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~g---ivH  194 (258)
T 1zth_A          128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQEAE---LVH  194 (258)
T ss_dssp             HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHTSC---EEC
T ss_pred             HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHHCC---EEe
Confidence            98864  333332    467899999942 4    56555421      235678899999999999999 887   999


Q ss_pred             ccCCCCcEEECCCCCeeeecccccccc
Q 003786          601 RDLKASNILLDKDMNPKISDFGMARIF  627 (795)
Q Consensus       601 rDikp~NIll~~~~~vkL~DFGla~~~  627 (795)
                      |||||+|||++.  .++|+|||++...
T Consensus       195 rDlkp~NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          195 ADLSEYNIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             SSCSTTSEEESS--SEEECCCTTCEET
T ss_pred             CCCCHHHEEEcC--cEEEEECcccccC
Confidence            999999999998  9999999999754

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=99.74  E-value=4.8e-18  Score=150.93  Aligned_cols=109  Identities=22%  Similarity=0.367  Sum_probs=90.3

Q ss_pred             cccccCCCCCccCCCCeEEeCCCeEEEEEeCCCCCCceEEEEEeccCCCeEEEecCCCCCCccCcceEEEeeCCceEEeC
Q 003786           23 IAADNITPSRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPDTIVWVANRNSPIFDSNAVLTISNGGKLVLLN  102 (795)
Q Consensus        23 ~~~~~l~~~~~l~~~~~l~s~~g~f~lgf~~~~~~~~~~~~iw~~~~~~t~vW~an~~~p~~~~~~~l~~~~~g~lvl~~  102 (795)
                      +|.|||.|||.|.+|+.|.  +|.|.|.|+.+|+     +.+ |..     +|.+|+..+  +.++.|+|+.||||||+|
T Consensus         1 ~~~dtL~~gq~L~~g~~L~--~g~~~L~~q~dGN-----Lvl-~~~-----~Wssnt~~~--~~~~~l~l~~dGnLvl~d   65 (109)
T 3r0e_A            1 LGTNYLLSGQTLDTEGHLK--NGDFDLVMQDDCN-----LVL-YNG-----NWQSNTANN--GRDCKLTLTDYGELVIKN   65 (109)
T ss_dssp             CCCSEEETTCEECTTCEEE--ETTEEEEECTTSC-----EEE-ETT-----TEECCCTTS--CSSCEEEECTTSCEEEEC
T ss_pred             CccCCcCCCCCcCCCCEeE--CCCEEEEEecCCe-----EEE-EeC-----eEEcCCCCC--CCcEEEEEcCCCeEEEEe
Confidence            4789999999999999994  5999999998886     222 432     699998865  456899999999999999


Q ss_pred             CCCceEEeecCCCCccccEEEEccCCCeEEeecCCCCCcccceecccCCCchhhhcc
Q 003786          103 QTNGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQSFDHPSDTLLAG  159 (795)
Q Consensus       103 ~~~~~~Wst~~~~~~~~~~a~l~d~GNlvl~~~~~~~~~~~~~WqSFd~PTDtlLpg  159 (795)
                      .++.++|+|++.+......|+|+||||||||+        ..+|+|     .|.+||
T Consensus        66 ~~~~~vWss~t~~~~~~~~~~L~~dGNlvly~--------~~~W~s-----~t~~~~  109 (109)
T 3r0e_A           66 GDGSTVWKSGAQSVKGNYAAVVHPDGRLVVFG--------PSVFKI-----DPWVRG  109 (109)
T ss_dssp             TTSCEEEECCCCCSSSCCEEEEETTTEEEEEC--------SEEEEE-----CTTSCC
T ss_pred             CCCCEEEcCCCcCCCcCEEEEEcCCCeEEEEe--------cCEECC-----CCccCC
Confidence            99999999998765456789999999999995        479996     555554

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A

Probab=99.66  E-value=2.5e-16  Score=140.95  Aligned_cols=97  Identities=22%  Similarity=0.391  Sum_probs=80.0

Q ss_pred             CCCccCcceEEEeeCCceEEeCCCCceEEeecCCCCccccEEEEccCCCeEEeecCCCCCcccceecccCCCchhhhccC
Q 003786           81 SPIFDSNAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQSFDHPSDTLLAGM  160 (795)
Q Consensus        81 ~p~~~~~~~l~~~~~g~lvl~~~~~~~~Wst~~~~~~~~~~a~l~d~GNlvl~~~~~~~~~~~~~WqSFd~PTDtlLpgq  160 (795)
                      .|+.+...+|.|+.||||||++. +.+||++++.+...++.|+|+++|||||+|      .+.++||||+          
T Consensus        14 ~~L~~~~~~L~~~~dgnlvl~~~-~~~vW~sn~~~~~~~~~l~l~~~GNLvl~d------~~~~~W~S~~----------   76 (112)
T 1xd5_A           14 GSLAEGGYLFIIQNDCNLVLYDN-NRAVWASGTNGKASGCVLKMQNDGNLVIYS------GSRAIWASNT----------   76 (112)
T ss_dssp             CEEEETTEEEEECTTSCEEEEET-TEEEEECCCTTSCSSEEEEECTTSCEEEEE------TTEEEEECCC----------
T ss_pred             CEEeCCCEEEEEcCCCcEEEEEC-CEEEEeCCCcCCCCCEEEEEeCCCCEEEEc------CCEEEEECCc----------
Confidence            34445568899999999999987 789999998765556788999999999997      2468999994          


Q ss_pred             eeccccccCcceeEEEecCCCCCCCCceEEeeccCCcceEEEEc-CceeEEeeCCCCC
Q 003786          161 KLGWDLKTGLERYQTSWKSDDDPSPGNYTHRLDIHVLPKLCTYN-GSVKLLCSGPWNG  217 (795)
Q Consensus       161 kl~~~~~~~~~~~l~Sw~s~~dps~G~ys~~~~~~~~~~~~~~~-~s~~~~~sg~w~~  217 (795)
                                           +|++|.|++.++++|.  +++|. +...||++++|+|
T Consensus        77 ---------------------~~~~g~~~l~l~~dGn--lvl~~~~~~~~W~S~~~~g  111 (112)
T 1xd5_A           77 ---------------------NRQNGNYYLILQRDRN--VVIYDNSNNAIWATHTNVG  111 (112)
T ss_dssp             ---------------------CCSCCCCEEEECTTSC--EEEECTTSCEEEECCCCCC
T ss_pred             ---------------------cCCCCCEEEEEeCCCc--EEEECCCCceEEECCCccC
Confidence                                 4567889999999987  55665 5689999999987

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*

Probab=99.66  E-value=2.7e-16  Score=140.08  Aligned_cols=91  Identities=21%  Similarity=0.328  Sum_probs=75.9

Q ss_pred             cCcceEEEeeCCceEEeCCCCceEEeecCCCCccccEEEEccCCCeEEeecCCCCCcccceecccCCCchhhhccCeecc
Q 003786           85 DSNAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQSFDHPSDTLLAGMKLGW  164 (795)
Q Consensus        85 ~~~~~l~~~~~g~lvl~~~~~~~~Wst~~~~~~~~~~a~l~d~GNlvl~~~~~~~~~~~~~WqSFd~PTDtlLpgqkl~~  164 (795)
                      +...+|.|+.||||||++ .+.+||++++.+...++.++|+++|||||++     ..+.+|||||.              
T Consensus        19 ~~~~~l~~~~dGnlvl~~-~~~~vW~sn~~~~~~~~~l~l~~dGNLVl~~-----~~~~~~W~S~t--------------   78 (110)
T 3a0c_A           19 GPSYRLIMQGDCNFVLYD-SGKPVWASNTGGLGSGCRLTLHNNGNLVIYD-----QSNRVIWQTKT--------------   78 (110)
T ss_dssp             TTTEEEEECTTSCEEEEE-TTEEEEECCCTTSCSSCEEEECTTSCEEEEC-----TTCCEEEECCC--------------
T ss_pred             CCCEEEEEcCCCcEEEEE-CCEEEEECCCCCCCCcEEEEEeCCCCEEEEC-----CCCcEEEecCC--------------
Confidence            446789999999999998 5889999998765556789999999999998     35689999993              


Q ss_pred             ccccCcceeEEEecCCCCCCCCceEEeeccCCcceEEEEcCceeEEeeCCCC
Q 003786          165 DLKTGLERYQTSWKSDDDPSPGNYTHRLDIHVLPKLCTYNGSVKLLCSGPWN  216 (795)
Q Consensus       165 ~~~~~~~~~l~Sw~s~~dps~G~ys~~~~~~~~~~~~~~~~s~~~~~sg~w~  216 (795)
                                       +|++|.|++.++.+|.  ++++++  .||+++++.
T Consensus        79 -----------------~~~~g~~~l~l~~dGn--lvl~~~--~~W~S~~~~  109 (110)
T 3a0c_A           79 -----------------NGKEDHYVLVLQQDRN--VVIYGP--VVWATGSGP  109 (110)
T ss_dssp             -----------------CCSSSCCEEEECTTSC--EEEECS--EEEECSCCC
T ss_pred             -----------------CCCCCCEEEEEeCCcc--EEEECC--CEecCCCcC
Confidence                             4567899999999986  566765  799998753

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.65  E-value=1.1e-16  Score=173.33  Aligned_cols=141  Identities=13%  Similarity=0.134  Sum_probs=100.2

Q ss_pred             cCCccccccCcCCcccEEEeEecCcceEEEEEecccCc--------------cchHHHHHHHHHHHhcCCcccceeeeee
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSG--------------QGQEEFKNEIKLIAKLQHRNLVRLLGCC  540 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------------~~~~~~~~E~~~l~~l~h~niv~l~~~~  540 (795)
                      .=|++.++||+|++|.||+|...+|+.||||+++....              ........++++.....|+|+++++...
T Consensus        95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g  174 (397)
T 4gyi_A           95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG  174 (397)
T ss_dssp             SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence            34899999999999999999988999999998753210              0111122233333333344444433221


Q ss_pred             e------ecceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCC
Q 003786          541 I------ELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDM  614 (795)
Q Consensus       541 ~------~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~  614 (795)
                      .      .....++||||++|+.|..+.         .......++.||+.+|.+||+.|   ||||||||.|||+++++
T Consensus       175 v~vp~p~~~~~~~LVME~i~G~~L~~l~---------~~~~~~~l~~qll~~l~~lH~~g---IVHrDLKp~NILl~~dg  242 (397)
T 4gyi_A          175 FPVPEPIAQSRHTIVMSLVDALPMRQVS---------SVPDPASLYADLIALILRLAKHG---LIHGDFNEFNILIREEK  242 (397)
T ss_dssp             CSCCCEEEEETTEEEEECCSCEEGGGCC---------CCSCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEEEEE
T ss_pred             CCCCeeeeccCceEEEEecCCccHhhhc---------ccHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeCCC
Confidence            1      122347999999998886543         23456678999999999999988   99999999999998877


Q ss_pred             C----------eeeecccccccc
Q 003786          615 N----------PKISDFGMARIF  627 (795)
Q Consensus       615 ~----------vkL~DFGla~~~  627 (795)
                      .          +.|+||+-+...
T Consensus       243 d~~d~~~~~~~~~iID~~Q~V~~  265 (397)
T 4gyi_A          243 DAEDPSSITLTPIIIXFPQMVSM  265 (397)
T ss_dssp             CSSCTTSEEEEEEECCCTTCEET
T ss_pred             CcccccccccceEEEEeCCcccC
Confidence            3          889999987643

>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=99.63  E-value=8.7e-16  Score=136.80  Aligned_cols=103  Identities=15%  Similarity=0.245  Sum_probs=84.3

Q ss_pred             cccCCCCCccCCCCeEEeCCCeEEEEEeCCCCCCceEEEEEeccCCCeEEEecCCCCCCccCcceEEEeeCCceEEeCCC
Q 003786           25 ADNITPSRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPDTIVWVANRNSPIFDSNAVLTISNGGKLVLLNQT  104 (795)
Q Consensus        25 ~~~l~~~~~l~~~~~l~s~~g~f~lgf~~~~~~~~~~~~iw~~~~~~t~vW~an~~~p~~~~~~~l~~~~~g~lvl~~~~  104 (795)
                      .|+|.|||.|.+|+.|.  +|.|.|.|+.+|+     +.+ |..  .. ||.+|+..+  +..+.|.|+.||||||+|.+
T Consensus         2 ~~~l~~gq~L~~g~~L~--~g~~~L~~q~dGn-----Lvl-~~~--~~-vW~snt~~~--~~~~~l~l~~dGNLVl~~~~   68 (111)
T 3mez_A            2 NNVLLTGDVIHTDNQLS--YESAAFVMQGDCN-----LVL-YNE--AG-GFQSNTHGR--GVDCTLRLNNRGQLEIHSAN   68 (111)
T ss_dssp             TTEEETTCEECTTCEEE--ETTEEEEECTTSC-----EEE-ECS--SC-CEECCCTTS--CSSCEEEECTTSCEEEECSS
T ss_pred             cCEeCCCCEeCCCCEEe--cCCEEEEEccCCe-----EEE-ECC--CC-EEECCcccC--CcCEEEEEcCCCcEEEEeCC
Confidence            48999999999999995  5999999998886     344 432  24 999999876  44689999999999999988


Q ss_pred             Cc-eEEeecCCC--CccccEEEEccCCCeEEeecCCCCCcccceecc
Q 003786          105 NG-TIWSSNLSR--EVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQS  148 (795)
Q Consensus       105 ~~-~~Wst~~~~--~~~~~~a~l~d~GNlvl~~~~~~~~~~~~~WqS  148 (795)
                      +. ++|+|++..  ....+.++|++|||||||+        ..+|+|
T Consensus        69 ~~~~vW~S~t~~~~~~~~~~l~Lq~dGNlvly~--------~~~W~s  107 (111)
T 3mez_A           69 SNTPVWVYPRSVNTVRGNYAATLGPDQHVTIYG--------PAIWST  107 (111)
T ss_dssp             CSSCSEEESSSCCCCSSCCEEEECTTSCEEEEC--------SEEEEC
T ss_pred             CCEEEEEeccccCCCCcCEEEEECCCCeEEEec--------cCEEcc
Confidence            76 599999642  2345788999999999995        479987

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1

Probab=99.59  E-value=4e-15  Score=134.21  Aligned_cols=87  Identities=24%  Similarity=0.284  Sum_probs=73.2

Q ss_pred             cceEEEeeCCceEEeCCCCceEEeecCCCCccccEEEEccCCCeEEeecCCCCCcccceecccCCCchhhhccCeecccc
Q 003786           87 NAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQSFDHPSDTLLAGMKLGWDL  166 (795)
Q Consensus        87 ~~~l~~~~~g~lvl~~~~~~~~Wst~~~~~~~~~~a~l~d~GNlvl~~~~~~~~~~~~~WqSFd~PTDtlLpgqkl~~~~  166 (795)
                      ...|.|+.||||||++. +.+||++++.+...++.|+|+|+|||||+|     ..+.+|||||                 
T Consensus        31 ~~~L~~~~dgnlvly~~-~~~vW~sn~~~~~~~~~l~l~~dGNLVl~d-----~~~~~lW~S~-----------------   87 (119)
T 1b2p_A           31 VYRFIMQTDCNLVLYDN-NNPIWATNTGGLGNGCRAVLQPDGVLVVIT-----NENVTVWQSP-----------------   87 (119)
T ss_dssp             EEEEEECTTSCEEEEET-TEEEEECCCTTSCSSCEEEECTTSCEEEEC-----TTCCEEEECS-----------------
T ss_pred             CEEEEEecCCCEEEEEC-CEEEEeCCCccCCCceEEEEccCCEEEEEe-----CCCcEEEcCC-----------------
Confidence            45788999999999987 889999998765556789999999999998     3568999999                 


Q ss_pred             ccCcceeEEEecCCCCCCCCceEEeeccCCcceEEEEcCceeEEeeCC
Q 003786          167 KTGLERYQTSWKSDDDPSPGNYTHRLDIHVLPKLCTYNGSVKLLCSGP  214 (795)
Q Consensus       167 ~~~~~~~l~Sw~s~~dps~G~ys~~~~~~~~~~~~~~~~s~~~~~sg~  214 (795)
                                    .+|++|.|++.++++|.  +++++  ..||++|+
T Consensus        88 --------------~~~~~g~~~l~l~~~Gn--lvl~~--~~~W~Sg~  117 (119)
T 1b2p_A           88 --------------VAGKAGHYVLVLQPDRN--VVIYG--DALWATQT  117 (119)
T ss_dssp             --------------CCCCSSCEEEEECTTSC--EEEEE--SEEEECCC
T ss_pred             --------------CCCCCCCEEEEEECCCc--EEEEC--ccEeCCCC
Confidence                          35678999999999987  55665  38999987

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*

Probab=99.59  E-value=4.7e-15  Score=133.26  Aligned_cols=92  Identities=29%  Similarity=0.369  Sum_probs=76.9

Q ss_pred             cceEEEeeCCceEEeCCCCceEEeecCCCCccccEEEEccCCCeEEeecCCCCCcccceecccCCCchhhhccCeecccc
Q 003786           87 NAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQSFDHPSDTLLAGMKLGWDL  166 (795)
Q Consensus        87 ~~~l~~~~~g~lvl~~~~~~~~Wst~~~~~~~~~~a~l~d~GNlvl~~~~~~~~~~~~~WqSFd~PTDtlLpgqkl~~~~  166 (795)
                      ...|.|+.||||||++ .+.+||++++.+...++.++|+++|||||+|     ..+.++|||||+               
T Consensus        21 ~~~L~~~~dgnlvly~-~~~~vW~sn~~~~~~~~~l~l~~~GnLvl~d-----~~~~~vW~S~~~---------------   79 (115)
T 2dpf_A           21 AYTLTIQNKCNLVKYQ-NGRQIWASNTDRRGSGCRLTLLSDGNLVIYD-----HNNNDVWGSACW---------------   79 (115)
T ss_dssp             TEEEEECTTSCEEEEE-TTEEEEECSCTTSCSSCEEEECTTSCEEEEC-----TTCCEEEECCCC---------------
T ss_pred             CEEEEEcCCCcEEEEe-CCEEEEeCCCCCCCCceEEEECCCCcEEEEC-----CCceEEEEcCCC---------------
Confidence            4678899999999998 5789999998755556788999999999998     346799999997               


Q ss_pred             ccCcceeEEEecCCCCCCCCceEEeeccCCcceEEEEcCceeEEeeCCCCCee
Q 003786          167 KTGLERYQTSWKSDDDPSPGNYTHRLDIHVLPKLCTYNGSVKLLCSGPWNGAI  219 (795)
Q Consensus       167 ~~~~~~~l~Sw~s~~dps~G~ys~~~~~~~~~~~~~~~~s~~~~~sg~w~~~~  219 (795)
                                      |++|.|++.++.+|.  ++++++  .||++++|....
T Consensus        80 ----------------~~~g~~~l~l~~dGn--lvl~~~--~~W~S~~~~~~~  112 (115)
T 2dpf_A           80 ----------------GDNGKYALVLQKDGR--FVIYGP--VLWSLGPNGCRR  112 (115)
T ss_dssp             ----------------CSSSCCEEEECTTSC--EEEECS--EEECSSTTCBCC
T ss_pred             ----------------CCCCCEEEEEeCCCe--EEEECC--CEEECCCCCCcC
Confidence                            346789999999996  666765  899999998653

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A*

Probab=99.40  E-value=9.2e-13  Score=136.85  Aligned_cols=111  Identities=21%  Similarity=0.399  Sum_probs=87.0

Q ss_pred             cccccCCCCCc----cCCCCeEEeC----CCeEEEEEeCCCCCCceEEEEEeccCCCeEEEecCCCCCCccCcceEEEee
Q 003786           23 IAADNITPSRF----IRDGEKLVSS----SQRFELGFFSPGKSKYRYLGIWYKQIPDTIVWVANRNSPIFDSNAVLTISN   94 (795)
Q Consensus        23 ~~~~~l~~~~~----l~~~~~l~s~----~g~f~lgf~~~~~~~~~~~~iw~~~~~~t~vW~an~~~p~~~~~~~l~~~~   94 (795)
                      .-+|||.||+.    |..|+.|.|+    .|.|.|.|...|   .  +.+| ++ ..+++|.+++..+  +. +.|.++.
T Consensus       134 ~ptdtlLpg~~~~~~l~~g~~L~S~~dps~G~fsl~l~~dG---n--lvLy-~~-~~~~yW~Sgt~~~--~~-~~l~l~~  203 (276)
T 3m7h_A          134 TPAIPLVPGAIDSLLLAPGSELVQGVVYGAGASKLVFQGDG---N--LVAY-GP-NGAATWNAGTQGK--GA-VRAVFQG  203 (276)
T ss_dssp             CTTSCCCCSCTTCEEECSSEEECTTCEEEETTEEEEECTTS---C--EEEE-CT-TSSEEEECCCTTT--TC-CEEEECT
T ss_pred             ccccccccccccccccccCcccccCCCCCCceEEEeecCCc---e--EEEE-eC-CCeEEEECCCCCC--cc-EEEEEcC
Confidence            35699999999    8899998664    355566554444   2  3333 32 2589999999876  33 7899999


Q ss_pred             CCceEEeCCCCceEEeecCCCCccccEEEEccCCCeEEeecCCCCCcccceecccCC
Q 003786           95 GGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQSFDH  151 (795)
Q Consensus        95 ~g~lvl~~~~~~~~Wst~~~~~~~~~~a~l~d~GNlvl~~~~~~~~~~~~~WqSFd~  151 (795)
                      ||||+++|.++.++|++++.+. ....|+|++||||||++     .  +++||||||
T Consensus       204 dGnLvl~d~~~~~vWsS~t~~~-~~~rl~Ld~dGnLvly~-----~--~~~Wqsf~~  252 (276)
T 3m7h_A          204 DGNLVVYGAGNAVLWHSHTGGH-ASAVLRLQANGSIAILD-----E--KPVWARFGF  252 (276)
T ss_dssp             TSCEEEECTTSCEEEECSCTTC-TTCEEEECTTSCEEEEE-----E--EEEEESSSC
T ss_pred             CCeEEEEeCCCcEEEEecCCCC-CCEEEEEcCCccEEEEc-----C--CCeEEccCc
Confidence            9999999998899999998754 35788999999999997     2  589999997

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.33  E-value=7.5e-12  Score=130.00  Aligned_cols=147  Identities=16%  Similarity=0.069  Sum_probs=117.3

Q ss_pred             HHHccCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcC-CcccceeeeeeeecceeeEE
Q 003786          471 SAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQ-HRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       471 ~~~~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv  549 (795)
                      ......|++...++.|+.+.||++.. .++.+++|+...........+.+|+++|+.+. +..+.++++++.+....++|
T Consensus        10 ~~~l~~~~~~~~~~g~s~~~v~~~~~-~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv   88 (263)
T 3tm0_A           10 KKLIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL   88 (263)
T ss_dssp             HHHHTTSEEEECCSCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred             HHHhccceeEeeccCCCCCeEEEEEC-CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEE
Confidence            34456788888999999999999975 36899999987533234457999999999995 67788899999888899999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhc------------------------------------
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY------------------------------------  593 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~------------------------------------  593 (795)
                      |||++|.+|...+.        +......++.+++++|..||+.                                    
T Consensus        89 ~e~i~G~~l~~~~~--------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (263)
T 3tm0_A           89 MSEADGVLCSEEYE--------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEE  160 (263)
T ss_dssp             EECCSSEEHHHHCC--------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGST
T ss_pred             EEecCCeehhhccC--------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccc
Confidence            99999999976531        2234557889999999999981                                    


Q ss_pred             --------------------CCCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          594 --------------------SRLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       594 --------------------~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                                          ....++|+|++|.|||++.+..+.|+||+.+..
T Consensus       161 ~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T 3tm0_A          161 DTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             TCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             cccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence                                113599999999999998765567999998753

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=99.32  E-value=6.1e-12  Score=112.30  Aligned_cols=95  Identities=19%  Similarity=0.287  Sum_probs=72.0

Q ss_pred             CCCCccCcceEEEeeCCceEEeCC-CCceEEeecCCCCccccEEEEccCCCeEEeecCCCCCcccceecccCCCchhhhc
Q 003786           80 NSPIFDSNAVLTISNGGKLVLLNQ-TNGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQSFDHPSDTLLA  158 (795)
Q Consensus        80 ~~p~~~~~~~l~~~~~g~lvl~~~-~~~~~Wst~~~~~~~~~~a~l~d~GNlvl~~~~~~~~~~~~~WqSFd~PTDtlLp  158 (795)
                      +.|+.+...+|.++.||||||++. .+.++|++++.+...++.++|+++|||||+|.     .+.++|||=.+       
T Consensus        18 g~~L~~g~~~L~~q~dGNLvL~~~~~~~~vWssnt~~~~~~~~l~l~~dGNLVl~d~-----~~~~iW~S~t~-------   85 (113)
T 3mez_B           18 NAQLATRDYSLVMRDDCNLVLTKGSKTNIVWESGTSGRGQHCFMRLGHSGELDITDD-----RLNTVFVSNTV-------   85 (113)
T ss_dssp             TCEEEETTEEEEECTTSCEEEEETTTTEEEEECCCTTSCSSCEEEECTTSCEEEECT-----TSCEEEECSCC-------
T ss_pred             CCEeEcCCEEEEEcCCCEEEEEECCCCEEEEECCcccCCcCEEEEEeCCCcEEEECC-----CCCEEEECCCc-------
Confidence            345555678899999999999998 48999999987655567889999999999983     45789996321       


Q ss_pred             cCeeccccccCcceeEEEecCCCCCCCCceEEeeccCCcceEEEEcCceeEEeeCC
Q 003786          159 GMKLGWDLKTGLERYQTSWKSDDDPSPGNYTHRLDIHVLPKLCTYNGSVKLLCSGP  214 (795)
Q Consensus       159 gqkl~~~~~~~~~~~l~Sw~s~~dps~G~ys~~~~~~~~~~~~~~~~s~~~~~sg~  214 (795)
                                              -..|.|.+.++.+|...  +|.  .++|.+||
T Consensus        86 ------------------------~~~~~~~~~L~~dGnlv--ly~--~~~W~s~~  113 (113)
T 3mez_B           86 ------------------------GQEGDYVLILQINGQAV--VYG--PAVWSTAA  113 (113)
T ss_dssp             ------------------------CSSSCCEEEECTTSCEE--EEC--SEEEESCC
T ss_pred             ------------------------CCCCCEEEEEcCCceEE--Eec--CCEecCCC
Confidence                                    01245888898888654  444  57898875

>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=99.23  E-value=3.1e-11  Score=107.27  Aligned_cols=94  Identities=18%  Similarity=0.234  Sum_probs=69.6

Q ss_pred             CCccCcceEEEeeCCceEEeCCCCceEEeecCCCCccccEEEEccCCCeEEeecCCCCCcccceecccCCCchhhhccCe
Q 003786           82 PIFDSNAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQSFDHPSDTLLAGMK  161 (795)
Q Consensus        82 p~~~~~~~l~~~~~g~lvl~~~~~~~~Wst~~~~~~~~~~a~l~d~GNlvl~~~~~~~~~~~~~WqSFd~PTDtlLpgqk  161 (795)
                      ++.+....|.++.||||||++.++  +|++++.+....+.++|+++|||||++.    ....++|||.-+          
T Consensus        16 ~L~~g~~~L~~q~dGnLvl~~~~~--vW~snt~~~~~~~~l~l~~dGNLVl~~~----~~~~~vW~S~t~----------   79 (111)
T 3mez_A           16 QLSYESAAFVMQGDCNLVLYNEAG--GFQSNTHGRGVDCTLRLNNRGQLEIHSA----NSNTPVWVYPRS----------   79 (111)
T ss_dssp             EEEETTEEEEECTTSCEEEECSSC--CEECCCTTSCSSCEEEECTTSCEEEECS----SCSSCSEEESSS----------
T ss_pred             EEecCCEEEEEccCCeEEEECCCC--EEECCcccCCcCEEEEEcCCCcEEEEeC----CCCEEEEEeccc----------
Confidence            334456789999999999999876  9999987655567889999999999983    223459998731          


Q ss_pred             eccccccCcceeEEEecCCCCCCCCceEEeeccCCcceEEEEcCceeEEeeCC
Q 003786          162 LGWDLKTGLERYQTSWKSDDDPSPGNYTHRLDIHVLPKLCTYNGSVKLLCSGP  214 (795)
Q Consensus       162 l~~~~~~~~~~~l~Sw~s~~dps~G~ys~~~~~~~~~~~~~~~~s~~~~~sg~  214 (795)
                                         .....|.|.+.++.+|...  +|.  .++|.++.
T Consensus        80 -------------------~~~~~~~~~l~Lq~dGNlv--ly~--~~~W~s~t  109 (111)
T 3mez_A           80 -------------------VNTVRGNYAATLGPDQHVT--IYG--PAIWSTPA  109 (111)
T ss_dssp             -------------------CCCCSSCCEEEECTTSCEE--EEC--SEEEECCC
T ss_pred             -------------------cCCCCcCEEEEECCCCeEE--Eec--cCEEccCC
Confidence                               0112467899999888655  344  67887764

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.16  E-value=7e-11  Score=122.14  Aligned_cols=139  Identities=17%  Similarity=0.136  Sum_probs=103.6

Q ss_pred             ccCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcc--cceeeeeeeecceeeEEee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRN--LVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~E  551 (795)
                      ..++.+....+.|..+.||++...+|+.+++|+....   ....+.+|+.+++.+.+.+  +.+++++....+..++|||
T Consensus        19 ~~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e   95 (264)
T 1nd4_A           19 LFGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLG   95 (264)
T ss_dssp             TTTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEE
T ss_pred             cCCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEE
Confidence            3455554333466669999998777888999997543   3356889999999996545  4568888887778899999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcC-------------------------------------
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS-------------------------------------  594 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-------------------------------------  594 (795)
                      |++|.+|.  ...         .....++.++++.|..||...                                     
T Consensus        96 ~i~G~~l~--~~~---------~~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (264)
T 1nd4_A           96 EVPGQDLL--SSH---------LAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQG  164 (264)
T ss_dssp             CCSSEETT--TSC---------CCHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTT
T ss_pred             ecCCcccC--cCc---------CCHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccC
Confidence            99998884  210         123366777888888888643                                     


Q ss_pred             ------------------CCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          595 ------------------RLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       595 ------------------~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                                        ...++|+|++|.|||++.++.+.|+||+.+..
T Consensus       165 ~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~  214 (264)
T 1nd4_A          165 LAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV  214 (264)
T ss_dssp             CCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             ccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence                              12399999999999998776677999999764

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=99.13  E-value=1.3e-10  Score=103.11  Aligned_cols=85  Identities=21%  Similarity=0.330  Sum_probs=64.8

Q ss_pred             cceEEEeeCCceEEeCCCCceEEeecCCCCccccEEEEccCCCeEEeecCCCCCcccceecccCCCchhhhccCeecccc
Q 003786           87 NAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQSFDHPSDTLLAGMKLGWDL  166 (795)
Q Consensus        87 ~~~l~~~~~g~lvl~~~~~~~~Wst~~~~~~~~~~a~l~d~GNlvl~~~~~~~~~~~~~WqSFd~PTDtlLpgqkl~~~~  166 (795)
                      ...|.++.||||||++.  .++|++++.+....+.++|+++|||||+|.     .+.++|||-.+-              
T Consensus        25 ~~~L~~q~dGnLvl~~~--~~vW~snt~~~~~~~~l~l~~dGNLvl~d~-----~~~~iW~S~t~~--------------   83 (110)
T 3r0e_B           25 NHQLVMQGDCNLVLYGG--KYGWQSNTHGNGEHCFLRLNHKGELIIKDD-----DFKTIWSSRSSS--------------   83 (110)
T ss_dssp             SCEEEECTTSCEEEECS--SSCEECCCTTSSSSCEEEECTTSCEEEECT-----TCCEEEECCCCC--------------
T ss_pred             CEEEEEcCCCeEEEECC--eEEEECCCcCCCcCEEEEEeCCCcEEEEeC-----CCCEEEEcCCcC--------------
Confidence            47899999999999987  589999987655567889999999999983     467899975311              


Q ss_pred             ccCcceeEEEecCCCCCCCCceEEeeccCCcceEEEEcCceeEEeeC
Q 003786          167 KTGLERYQTSWKSDDDPSPGNYTHRLDIHVLPKLCTYNGSVKLLCSG  213 (795)
Q Consensus       167 ~~~~~~~l~Sw~s~~dps~G~ys~~~~~~~~~~~~~~~~s~~~~~sg  213 (795)
                                       ..|.|.+.++.+|...  +|+  ..+|.+|
T Consensus        84 -----------------~~~~~~~~L~~dGNlv--ly~--~~~W~t~  109 (110)
T 3r0e_B           84 -----------------KQGEYVLILQDDGFGV--IYG--PAIFETS  109 (110)
T ss_dssp             -----------------SSSCCEEEECTTSCEE--EEC--SEEEESC
T ss_pred             -----------------CCCCEEEEEcCCccEE--Eec--CCEecCC
Confidence                             1245888888888644  344  3678776

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*

Probab=99.11  E-value=2e-10  Score=101.78  Aligned_cols=87  Identities=23%  Similarity=0.334  Sum_probs=65.3

Q ss_pred             cceEEEeeCCceEEeCCCCceEEeecCCCCccccEEEEccCCCeEEeecCCCCCcccceecccCCCchhhhccCeecccc
Q 003786           87 NAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQSFDHPSDTLLAGMKLGWDL  166 (795)
Q Consensus        87 ~~~l~~~~~g~lvl~~~~~~~~Wst~~~~~~~~~~a~l~d~GNlvl~~~~~~~~~~~~~WqSFd~PTDtlLpgqkl~~~~  166 (795)
                      ...|.|+.||||||++. +.++|++++.+....+.++|+++|||||+|.     .+.++|||....              
T Consensus        20 ~~~L~~q~dGnLvly~~-~~~vW~snt~~~~~~~~l~l~~dGNLvl~~~-----~~~~~W~S~t~~--------------   79 (109)
T 3dzw_A           20 RYVFIMQEDCNLVLYDV-DKPIWATNTGGLDRRCHLSMQSDGNLVVYSP-----RNNPIWASNTGG--------------   79 (109)
T ss_dssp             TEEEEECTTSCEEEEET-TEEEEECCCTTSSSSCEEEECTTSCEEEECT-----TSCEEEECCCCC--------------
T ss_pred             CEEEEEcCCCcEEEEeC-CEEEEECCcccCCCCEEEEEeCCCCEEEECC-----CCCEEEECCCCC--------------
Confidence            57799999999999987 7899999987655567889999999999983     457899975321              


Q ss_pred             ccCcceeEEEecCCCCCCCCceEEeeccCCcceEEEEcCceeEEeeCC
Q 003786          167 KTGLERYQTSWKSDDDPSPGNYTHRLDIHVLPKLCTYNGSVKLLCSGP  214 (795)
Q Consensus       167 ~~~~~~~l~Sw~s~~dps~G~ys~~~~~~~~~~~~~~~~s~~~~~sg~  214 (795)
                                       ..+.|.+.++.+|...  +++.  .+|.+|.
T Consensus        80 -----------------~~~~~~~~L~ddGNlv--ly~~--~~W~s~t  106 (109)
T 3dzw_A           80 -----------------ENGNYVCVLQKDRNVV--IYGT--ARWATGT  106 (109)
T ss_dssp             -----------------SSSCEEEEECTTSCEE--EEES--CCCCCCC
T ss_pred             -----------------CCCCEEEEEeCCCEEE--EECC--CEEeCCC
Confidence                             1245788888887644  3432  5666553

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=99.08  E-value=3.2e-10  Score=100.36  Aligned_cols=92  Identities=22%  Similarity=0.381  Sum_probs=69.1

Q ss_pred             CCCccCcceEEEeeCCceEEeCCCCceEEeecCCCCccccEEEEccCCCeEEeecCCCCCcccceecccCCCchhhhccC
Q 003786           81 SPIFDSNAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQSFDHPSDTLLAGM  160 (795)
Q Consensus        81 ~p~~~~~~~l~~~~~g~lvl~~~~~~~~Wst~~~~~~~~~~a~l~d~GNlvl~~~~~~~~~~~~~WqSFd~PTDtlLpgq  160 (795)
                      .|+.+....|.++.||||||+++    +|+|++.+....+.++|+++|||||+|.     .+.++|+|-.          
T Consensus        16 ~~L~~g~~~L~~q~dGNLvl~~~----~Wssnt~~~~~~~~l~l~~dGnLvl~d~-----~~~~vWss~t----------   76 (109)
T 3r0e_A           16 GHLKNGDFDLVMQDDCNLVLYNG----NWQSNTANNGRDCKLTLTDYGELVIKNG-----DGSTVWKSGA----------   76 (109)
T ss_dssp             CEEEETTEEEEECTTSCEEEETT----TEECCCTTSCSSCEEEECTTSCEEEECT-----TSCEEEECCC----------
T ss_pred             CEeECCCEEEEEecCCeEEEEeC----eEEcCCCCCCCcEEEEEcCCCeEEEEeC-----CCCEEEcCCC----------
Confidence            44445567899999999999984    7999988665567889999999999983     4578897521          


Q ss_pred             eeccccccCcceeEEEecCCCCCCCCceEEeeccCCcceEEEEcCceeEEeeCCCC
Q 003786          161 KLGWDLKTGLERYQTSWKSDDDPSPGNYTHRLDIHVLPKLCTYNGSVKLLCSGPWN  216 (795)
Q Consensus       161 kl~~~~~~~~~~~l~Sw~s~~dps~G~ys~~~~~~~~~~~~~~~~s~~~~~sg~w~  216 (795)
                                           ....+.|.+.++.+|...  ++.  .++|.+++|-
T Consensus        77 ---------------------~~~~~~~~~~L~~dGNlv--ly~--~~~W~s~t~~  107 (109)
T 3r0e_A           77 ---------------------QSVKGNYAAVVHPDGRLV--VFG--PSVFKIDPWV  107 (109)
T ss_dssp             ---------------------CCSSSCCEEEEETTTEEE--EEC--SEEEEECTTS
T ss_pred             ---------------------cCCCcCEEEEEcCCCeEE--EEe--cCEECCCCcc
Confidence                                 002356888999888544  444  6789999874

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.98  E-value=2e-09  Score=117.15  Aligned_cols=142  Identities=13%  Similarity=0.225  Sum_probs=107.1

Q ss_pred             cccccCcCCcccEEEeEecCcceEEEEEec--ccC-ccchHHHHHHHHHHHhcC--Ccccceeeeeeeec---ceeeEEe
Q 003786          479 TENKLGEGGFGPVYKGRLLNGQEVAVKRLS--SQS-GQGQEEFKNEIKLIAKLQ--HRNLVRLLGCCIEL---EEKILIY  550 (795)
Q Consensus       479 ~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~---~~~~lv~  550 (795)
                      ..+.|+.|.++.||+++.. +..+++|+..  ... ......+.+|+.+++.+.  +..+.+++.++.+.   ...++||
T Consensus        42 ~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm  120 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM  120 (359)
T ss_dssp             EEEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred             eEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence            4578999999999999864 4688899875  322 123457889999999997  45577888888766   3478999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcC------------------------------------
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS------------------------------------  594 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------------------------------------  594 (795)
                      ||++|..+.+..     ...++...+..++.++++.|..||...                                    
T Consensus       121 e~v~G~~l~~~~-----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (359)
T 3dxp_A          121 EFVSGRVLWDQS-----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP  195 (359)
T ss_dssp             ECCCCBCCCCTT-----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred             EecCCeecCCCc-----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence            999998874321     123567788889999999999999831                                    


Q ss_pred             -------------------CCcEEeccCCCCcEEECCCCC--eeeeccccccc
Q 003786          595 -------------------RLRVIHRDLKASNILLDKDMN--PKISDFGMARI  626 (795)
Q Consensus       595 -------------------~~~iiHrDikp~NIll~~~~~--vkL~DFGla~~  626 (795)
                                         ...++|+|++|.|||++.++.  +.|+||+.+..
T Consensus       196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence                               246999999999999997763  68999999875

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.83  E-value=2.3e-09  Score=113.79  Aligned_cols=187  Identities=19%  Similarity=0.220  Sum_probs=121.6

Q ss_pred             ccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcC-Ccc--cceeeeeeeecc---eeeEEeecC
Q 003786          480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQ-HRN--LVRLLGCCIELE---EKILIYEYM  553 (795)
Q Consensus       480 ~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~l~~~~~~~~---~~~lv~E~~  553 (795)
                      .+.++.|....||++.    ..+++|+....  .....+.+|+++|+.+. +..  +.+++......+   ..++|||++
T Consensus        25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i   98 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI   98 (304)
T ss_dssp             CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred             eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence            4568999999999874    57899986432  34567899999999884 333  334444433332   347899999


Q ss_pred             CCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcC---------------------------------------
Q 003786          554 PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS---------------------------------------  594 (795)
Q Consensus       554 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---------------------------------------  594 (795)
                      +|..+.....     ..++..++..++.++++.++.||...                                       
T Consensus        99 ~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  173 (304)
T 3sg8_A           99 KGVPLTPLLL-----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKV  173 (304)
T ss_dssp             CCEECCHHHH-----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHH
T ss_pred             CCeECCcccc-----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHH
Confidence            9988865332     23566777888888888888888611                                       


Q ss_pred             ----------------CCcEEeccCCCCcEEECC--CCCeeeeccccccccCCCcccccc------------cccccccc
Q 003786          595 ----------------RLRVIHRDLKASNILLDK--DMNPKISDFGMARIFGGDELQSKT------------KRIVGTYG  644 (795)
Q Consensus       595 ----------------~~~iiHrDikp~NIll~~--~~~vkL~DFGla~~~~~~~~~~~~------------~~~~gt~~  644 (795)
                                      ...++|+|++|.||+++.  ...+.|+||+.+.......-....            .......+
T Consensus       174 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~  253 (304)
T 3sg8_A          174 DDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYK  253 (304)
T ss_dssp             HHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHT
T ss_pred             HHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcC
Confidence                            135899999999999998  456789999998754221100000            00001111


Q ss_pred             ccc-ccccccCCCCcccchhhHHHHHHHHHhCCCCC
Q 003786          645 YMS-PEYAQQGLFSIKSDVFSFGVLLLETLSSKRNT  679 (795)
Q Consensus       645 y~A-PE~~~~~~~~~k~DvwSlGvil~elltG~~p~  679 (795)
                      ... |+.....  ....+.|+++.+++.+.+|..++
T Consensus       254 ~~~~~~~~~r~--~~~~~~~~l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          254 HKDIPTVLEKY--RMKEKYWSFEKIIYGKEYGYMDW  287 (304)
T ss_dssp             CSCHHHHHHHH--HHHHHHHHHHHHHHHHHTTCHHH
T ss_pred             CCCcHHHHHHH--HHHHHHHHHHHHHHHHHcCCHHH
Confidence            112 2222111  22358999999999999997553

>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*

Probab=98.80  E-value=2e-08  Score=88.03  Aligned_cols=56  Identities=32%  Similarity=0.428  Sum_probs=45.8

Q ss_pred             cceEEEeeCCceEEeCCCCceEEeecCCCCc-cccEEEEccCCCeEEeecCCCCCcccceecc
Q 003786           87 NAVLTISNGGKLVLLNQTNGTIWSSNLSREV-KNPVAQLLDTGNLVVRDNFSSNSSEDYLWQS  148 (795)
Q Consensus        87 ~~~l~~~~~g~lvl~~~~~~~~Wst~~~~~~-~~~~a~l~d~GNlvl~~~~~~~~~~~~~WqS  148 (795)
                      .-+|.++.||||||++ .+.+||++++.... ..+.+.|+++|||||+|     ..+++||+|
T Consensus        20 ~y~l~~q~DgNLvly~-~~~~vW~ant~~~~~~~~~L~l~~dGnLvL~d-----~~~~~vWss   76 (105)
T 4h3o_A           20 PYHFIMQDDCNLVLYD-HSTSTWASNTEIGGKSGCSAVLQSDGNFVVYD-----SSGRSLWAS   76 (105)
T ss_dssp             TEEEEECTTSCEEEEE-TTEEEEECCCCCTTCCSCEEEECTTSCEEEEC-----TTCCEEEEC
T ss_pred             CEEEEECCCCeEEEEE-CCEEEEEecCCCCCCccEEEEEeCCccEEEEC-----CCcEEEEEe
Confidence            3568899999999998 46799999986433 35678999999999998     456789986

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1

Probab=98.50  E-value=2.3e-07  Score=94.34  Aligned_cols=106  Identities=18%  Similarity=0.318  Sum_probs=78.7

Q ss_pred             cccccCCCCC-------ccCCCCeEEeCCCeEEEEEeCCCCCCceEEEEEeccCCCeEEEecCCCCCCccCcceEEEeeC
Q 003786           23 IAADNITPSR-------FIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPDTIVWVANRNSPIFDSNAVLTISNG   95 (795)
Q Consensus        23 ~~~~~l~~~~-------~l~~~~~l~s~~g~f~lgf~~~~~~~~~~~~iw~~~~~~t~vW~an~~~p~~~~~~~l~~~~~   95 (795)
                      +..|+|.+||       .|..++.+.  .|.|.|.|.+.|+     +-+|...   +++|.++....  ...+.++++.+
T Consensus       123 ~g~d~L~~gq~~~~~~~~L~s~~d~s--~G~~~l~l~~dG~-----LvL~~~~---~~~W~s~~~~~--~~~~~~~L~~~  190 (236)
T 1dlp_A          123 NGNSILYSTQGNDNHPQTLHATQSLQ--LSPYRLSMETDCN-----LVLFDRD---DRVWSTNTAGK--GTGCRAVLQPN  190 (236)
T ss_dssp             CCCEECCCC--CCCCCCEECSSCCCB--CSSCEEEEETTTE-----EEEEBTT---BCCSCCCCCSS--CSSCEEEEETT
T ss_pred             ccceEEecCCcCCCccceEEcCcEee--cCcEEEEECCCCc-----EEEEcCC---EeEEeCCCcCC--CCceEEEECCC
Confidence            4568889998       566666655  5899999987762     4555433   68898876543  23578899999


Q ss_pred             CceEEeCCCCceEEeecCCCCccccEEEEccCCCeEEeecCCCCCcccceecc
Q 003786           96 GKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQS  148 (795)
Q Consensus        96 g~lvl~~~~~~~~Wst~~~~~~~~~~a~l~d~GNlvl~~~~~~~~~~~~~WqS  148 (795)
                      |+|++++.++.++|.+.+........++|.++|||+++.        ..+|+|
T Consensus       191 Gnl~ly~~~~~~vw~s~~~~~~~~~rl~Ld~dG~l~ly~--------~~~W~s  235 (236)
T 1dlp_A          191 GRMDVLTNQNIAVWTSGNSRSAGRYVFVLQPDRNLAIYG--------GALWTT  235 (236)
T ss_dssp             TEEEEEETTTEEEEECCCCCSSSCCEEEECSSSCEEEEC--------CCCCBC
T ss_pred             CcEEEEeCCCcEEEEeCCCCCCCCEEEEEcCCCcEEEeC--------CCCccC
Confidence            999999988889999987654445678999999999995        168876

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.30  E-value=3.2e-06  Score=89.51  Aligned_cols=136  Identities=23%  Similarity=0.200  Sum_probs=94.2

Q ss_pred             ccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCc---ccceeeeeee-ecceeeEEeecCCC
Q 003786          480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHR---NLVRLLGCCI-ELEEKILIYEYMPN  555 (795)
Q Consensus       480 ~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~E~~~~  555 (795)
                      .+.++.|....||+.    ++.+++|+-..  ......+.+|+++|+.+.+.   .+.+.+.+.. ..+..++|||+++|
T Consensus        24 v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G   97 (306)
T 3tdw_A           24 VESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG   97 (306)
T ss_dssp             EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred             eeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence            456888888899987    67899998532  23456789999999999753   2445555553 34457899999999


Q ss_pred             CChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhc------------------------------------------
Q 003786          556 KSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY------------------------------------------  593 (795)
Q Consensus       556 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~------------------------------------------  593 (795)
                      ..+......     .++......++.++++.|..||..                                          
T Consensus        98 ~~l~~~~~~-----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l  172 (306)
T 3tdw_A           98 QILGEDGMA-----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYL  172 (306)
T ss_dssp             EECHHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHH
T ss_pred             eECchhhhh-----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHH
Confidence            888653211     123444455555555555555543                                          


Q ss_pred             ---------------CCCcEEeccCCCCcEEECC---CCCe-eeeccccccc
Q 003786          594 ---------------SRLRVIHRDLKASNILLDK---DMNP-KISDFGMARI  626 (795)
Q Consensus       594 ---------------~~~~iiHrDikp~NIll~~---~~~v-kL~DFGla~~  626 (795)
                                     ....++|+|++|.||+++.   ++.+ .|+||+.+..
T Consensus       173 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          173 TLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             HHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             HHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence                           2234799999999999987   4665 8999998864

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=98.23  E-value=2.8e-06  Score=92.00  Aligned_cols=81  Identities=7%  Similarity=-0.021  Sum_probs=57.9

Q ss_pred             cccc-CcCCcccEEEeEec-------CcceEEEEEecccC---ccchHHHHHHHHHHHhcCC---cccceeeeeeeec--
Q 003786          480 ENKL-GEGGFGPVYKGRLL-------NGQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQH---RNLVRLLGCCIEL--  543 (795)
Q Consensus       480 ~~~L-G~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h---~niv~l~~~~~~~--  543 (795)
                      .+.| +.|....+|+.+..       +++.+++|+.....   ......+.+|+.+|+.+..   ..+.+++.++.+.  
T Consensus        25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~  104 (357)
T 3ats_A           25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV  104 (357)
T ss_dssp             EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred             EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence            4677 88999999998764       26789999875432   1123568899999998853   3466777776554  


Q ss_pred             -ceeeEEeecCCCCChhh
Q 003786          544 -EEKILIYEYMPNKSLDF  560 (795)
Q Consensus       544 -~~~~lv~E~~~~gsL~~  560 (795)
                       ...++|||+++|..+.+
T Consensus       105 ~g~~~~v~e~l~G~~l~~  122 (357)
T 3ats_A          105 LGTPFFLMDYVEGVVPPD  122 (357)
T ss_dssp             TSSCEEEEECCCCBCCCB
T ss_pred             cCCceEEEEecCCCChhh
Confidence             34689999999877653

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.19  E-value=9.2e-06  Score=84.04  Aligned_cols=135  Identities=19%  Similarity=0.173  Sum_probs=97.8

Q ss_pred             ccCcCCcc-cEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcC-CcccceeeeeeeecceeeEEeecCCCCCh
Q 003786          482 KLGEGGFG-PVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQ-HRNLVRLLGCCIELEEKILIYEYMPNKSL  558 (795)
Q Consensus       482 ~LG~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~E~~~~gsL  558 (795)
                      .+..|..+ .||+.... +++.+++|+-..   .....+.+|..+|+.+. +--+.+++.++.+.+..++|||+++|.++
T Consensus        31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~  107 (272)
T 4gkh_A           31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA  107 (272)
T ss_dssp             EEECSSSSCEEEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred             EccCCCcCCeEEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence            45556555 58988754 467899998643   23567889999999885 33366788888888999999999999887


Q ss_pred             hhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhc---------------------------------------------
Q 003786          559 DFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY---------------------------------------------  593 (795)
Q Consensus       559 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---------------------------------------------  593 (795)
                      .+....       .......+..+++..|..||..                                             
T Consensus       108 ~~~~~~-------~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (272)
T 4gkh_A          108 FQVLEE-------YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVW  180 (272)
T ss_dssp             HHHHHH-------CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHH
T ss_pred             cccccC-------CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHH
Confidence            665421       1223445666666667777653                                             


Q ss_pred             ----------CCCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          594 ----------SRLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       594 ----------~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                                ....++|+|+.+.|||++.++.+-|+||+.+..
T Consensus       181 ~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~  223 (272)
T 4gkh_A          181 KEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI  223 (272)
T ss_dssp             HHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             HHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence                      112389999999999999877777999998864

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=98.03  E-value=1.5e-05  Score=85.45  Aligned_cols=142  Identities=16%  Similarity=0.179  Sum_probs=82.3

Q ss_pred             ccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCc--ccceeee------eeeecceeeEEee
Q 003786          480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHR--NLVRLLG------CCIELEEKILIYE  551 (795)
Q Consensus       480 ~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~------~~~~~~~~~lv~E  551 (795)
                      .+.|+.|..+.||++...++ .+++|+...    ....+..|+.+++.|...  .+.+++.      +....+..+++||
T Consensus        37 ~~~l~gG~~n~~~~v~~~~~-~~vlk~~~~----~~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~  111 (346)
T 2q83_A           37 IDVIQGNQMALVWKVHTDSG-AVCLKRIHR----PEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD  111 (346)
T ss_dssp             EEECC----CEEEEEEETTE-EEEEEEECS----CHHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred             eeeccccccCcEEEEEeCCC-CEEEEecCC----CHHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence            35677778899999987554 599999864    234555667777666421  2333333      1234567789999


Q ss_pred             cCCCCChhh--------------hhhccCC----c-------ccCChhh-------------------------------
Q 003786          552 YMPNKSLDF--------------FLFDSTK----E-------NLLGWGT-------------------------------  575 (795)
Q Consensus       552 ~~~~gsL~~--------------~l~~~~~----~-------~~l~~~~-------------------------------  575 (795)
                      |++|..+..              .++....    .       ..-.|..                               
T Consensus       112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  191 (346)
T 2q83_A          112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE  191 (346)
T ss_dssp             CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred             eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence            999875430              0111000    0       0011111                               


Q ss_pred             HHHHHHHHHHHHHHHHh----------cCCCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          576 RVRIIEGIAQGLLYLHQ----------YSRLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       576 ~~~i~~~i~~~l~~LH~----------~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                      ...+...+.+++.+|+.          .....++|+|+++.|||++.++.+.|+||+.+..
T Consensus       192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~  252 (346)
T 2q83_A          192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF  252 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred             HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence            00111223445666653          1234699999999999998888999999998753

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=98.00  E-value=1.2e-05  Score=88.36  Aligned_cols=75  Identities=13%  Similarity=0.200  Sum_probs=51.5

Q ss_pred             ccccCcCCcccEEEeEec-CcceEEEEEecccCc-------cchHHHHHHHHHHHhcCC--cccc-eeeeeeeecceeeE
Q 003786          480 ENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG-------QGQEEFKNEIKLIAKLQH--RNLV-RLLGCCIELEEKIL  548 (795)
Q Consensus       480 ~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h--~niv-~l~~~~~~~~~~~l  548 (795)
                      .+.||.|..+.||+++.. +++.++||.......       ...+++..|.++|+.+..  |..+ +++.+  +.+..++
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l  112 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  112 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence            468999999999999754 468899998653211       234567889999988843  4444 45543  4456789


Q ss_pred             EeecCCCC
Q 003786          549 IYEYMPNK  556 (795)
Q Consensus       549 v~E~~~~g  556 (795)
                      |||++++.
T Consensus       113 vmE~l~g~  120 (397)
T 2olc_A          113 VMEDLSHL  120 (397)
T ss_dssp             EECCCTTS
T ss_pred             EEEeCCCc
Confidence            99999874

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=97.81  E-value=7.3e-05  Score=78.14  Aligned_cols=81  Identities=16%  Similarity=0.229  Sum_probs=60.8

Q ss_pred             ccCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCc---ccceeeeeeeecceeeEEe
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHR---NLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~lv~  550 (795)
                      ..+...++.+|.|..+.||+.+..+|+.|++|+...........|..|+..|+.|...   -+.++++.    +..++||
T Consensus        14 G~~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~   89 (288)
T 3f7w_A           14 GREVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAM   89 (288)
T ss_dssp             CCCEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEE
T ss_pred             CCCeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEE
Confidence            3456667889999999999999999999999987655444556789999999988532   23344443    2357899


Q ss_pred             ecCCCCCh
Q 003786          551 EYMPNKSL  558 (795)
Q Consensus       551 E~~~~gsL  558 (795)
                      ||++++..
T Consensus        90 e~l~~~~~   97 (288)
T 3f7w_A           90 EWVDERPP   97 (288)
T ss_dssp             ECCCCCCC
T ss_pred             EeecccCC
Confidence            99987754

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=97.69  E-value=0.00018  Score=75.94  Aligned_cols=77  Identities=19%  Similarity=0.153  Sum_probs=61.7

Q ss_pred             ccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcC---CcccceeeeeeeecceeeEEeecCC
Q 003786          478 STENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQ---HRNLVRLLGCCIELEEKILIYEYMP  554 (795)
Q Consensus       478 ~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~E~~~  554 (795)
                      ...+.|+.|....+|+... +++.+++|+....   ....+..|+..|+.|.   ...+.+++.+....+..++||||++
T Consensus        39 ~~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~  114 (312)
T 3jr1_A           39 KHKEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALN  114 (312)
T ss_dssp             CEEEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCC
T ss_pred             eeeEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEecc
Confidence            3456899999999999976 5678999987532   3567889999999884   3567788888877788999999999


Q ss_pred             CCCh
Q 003786          555 NKSL  558 (795)
Q Consensus       555 ~gsL  558 (795)
                      +..+
T Consensus       115 G~~~  118 (312)
T 3jr1_A          115 KSKN  118 (312)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9865

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=97.55  E-value=0.00017  Score=79.73  Aligned_cols=77  Identities=10%  Similarity=0.078  Sum_probs=47.5

Q ss_pred             CCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccccccccccc--ccccccccccccC---CCCcccchhhHHHHH
Q 003786          595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG--TYGYMSPEYAQQG---LFSIKSDVFSFGVLL  669 (795)
Q Consensus       595 ~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~~~~~~g--t~~y~APE~~~~~---~~~~k~DvwSlGvil  669 (795)
                      ...++|+|++|.|||++.++ ++|+||+.+....... .  ......  ...|++|+.....   .-....++.++...+
T Consensus       231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~-D--la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (420)
T 2pyw_A          231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGF-D--IGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQT  306 (420)
T ss_dssp             CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHH-H--HHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHH
T ss_pred             CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHH-H--HHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHH
Confidence            34699999999999998876 9999999987532110 0  000111  2346676655321   112234555777777


Q ss_pred             HHHHhC
Q 003786          670 LETLSS  675 (795)
Q Consensus       670 ~elltG  675 (795)
                      ++.+.+
T Consensus       307 ~~~y~~  312 (420)
T 2pyw_A          307 WNLFNK  312 (420)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            777664

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=97.46  E-value=0.00033  Score=74.20  Aligned_cols=158  Identities=15%  Similarity=0.129  Sum_probs=87.1

Q ss_pred             cHHhHHHHccCCcc-----ccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcc--cceeee
Q 003786          466 SLASVSAATANFST-----ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRN--LVRLLG  538 (795)
Q Consensus       466 ~~~~i~~~~~~~~~-----~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~  538 (795)
                      +...+.....+|.+     .+.|+.|....+|+....++ .+++|+....  ...+.+..|+.+++.+...+  +.+++.
T Consensus         8 ~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~~~   84 (322)
T 2ppq_A            8 TEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLPLP   84 (322)
T ss_dssp             CHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCC
T ss_pred             CHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCcccC
Confidence            33444444444443     35677888899999986544 7889988652  23356778888888775322  233332


Q ss_pred             e------eeecceeeEEeecCCCCChhhh--------------hhccCCc------ccC---ChhhHHH-----------
Q 003786          539 C------CIELEEKILIYEYMPNKSLDFF--------------LFDSTKE------NLL---GWGTRVR-----------  578 (795)
Q Consensus       539 ~------~~~~~~~~lv~E~~~~gsL~~~--------------l~~~~~~------~~l---~~~~~~~-----------  578 (795)
                      .      ....+..++++|+++|..+...              ++.....      ...   .|.....           
T Consensus        85 ~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~  164 (322)
T 2ppq_A           85 RKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEK  164 (322)
T ss_dssp             BTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTST
T ss_pred             CCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhh
Confidence            1      1223556899999998754210              1110000      000   1111000           


Q ss_pred             -HHHHHHHHHHHHHhc----CCCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          579 -IIEGIAQGLLYLHQY----SRLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       579 -i~~~i~~~l~~LH~~----~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                       +...+.+.+..++..    ....++|+|+.+.|||++.+..+.|+||+.+..
T Consensus       165 ~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~  217 (322)
T 2ppq_A          165 GLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN  217 (322)
T ss_dssp             THHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             hhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence             011234455555532    134699999999999998876568999988753

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=97.36  E-value=0.0004  Score=76.89  Aligned_cols=73  Identities=19%  Similarity=0.289  Sum_probs=51.5

Q ss_pred             ccccCcCCcccEEEeEecC--------cceEEEEEecccCccchHHHHHHHHHHHhcCCccc-ceeeeeeeecceeeEEe
Q 003786          480 ENKLGEGGFGPVYKGRLLN--------GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNL-VRLLGCCIELEEKILIY  550 (795)
Q Consensus       480 ~~~LG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~  550 (795)
                      .+.|+.|-...||++...+        ++.+++|+....  ...+.+.+|..+++.|...++ .++++.+.+    .+|+
T Consensus        78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~  151 (429)
T 1nw1_A           78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE  151 (429)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred             EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence            4678889999999998653        478999988432  122566689999998864444 466665542    3899


Q ss_pred             ecCCCCCh
Q 003786          551 EYMPNKSL  558 (795)
Q Consensus       551 E~~~~gsL  558 (795)
                      ||++|..+
T Consensus       152 e~l~G~~l  159 (429)
T 1nw1_A          152 EYIPSRPL  159 (429)
T ss_dssp             CCCCEEEC
T ss_pred             EEeCCccc
Confidence            99987554

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=97.29  E-value=0.00096  Score=72.31  Aligned_cols=141  Identities=23%  Similarity=0.275  Sum_probs=82.8

Q ss_pred             cccCcCCcccEEEeEec--------CcceEEEEEecccCccchHHHHHHHHHHHhcCCccc-ceeeeeeeecceeeEEee
Q 003786          481 NKLGEGGFGPVYKGRLL--------NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNL-VRLLGCCIELEEKILIYE  551 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~E  551 (795)
                      +.|..|-...+|++...        +++.+++|+.... ......+.+|.++++.|...++ .++++++.+    .+|||
T Consensus        56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e  130 (379)
T 3feg_A           56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ  130 (379)
T ss_dssp             EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred             EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence            57888999999999864        2478999986432 2345667799999988853333 456666543    29999


Q ss_pred             cCCCCChhhh-h----------------hccCC--cccCC--hhhHHHHHHHHH-------------------HHHHH--
Q 003786          552 YMPNKSLDFF-L----------------FDSTK--ENLLG--WGTRVRIIEGIA-------------------QGLLY--  589 (795)
Q Consensus       552 ~~~~gsL~~~-l----------------~~~~~--~~~l~--~~~~~~i~~~i~-------------------~~l~~--  589 (795)
                      |++|..|..- +                +....  .+...  +.++.++..++.                   +.+..  
T Consensus       131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~  210 (379)
T 3feg_A          131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR  210 (379)
T ss_dssp             CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred             EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence            9998665321 0                11000  01111  223333333321                   11222  


Q ss_pred             --HHhc-CCCcEEeccCCCCcEEECCC----CCeeeeccccccc
Q 003786          590 --LHQY-SRLRVIHRDLKASNILLDKD----MNPKISDFGMARI  626 (795)
Q Consensus       590 --LH~~-~~~~iiHrDikp~NIll~~~----~~vkL~DFGla~~  626 (795)
                        |... ....++|+|+.+.|||++.+    +.+.|+||..+..
T Consensus       211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~  254 (379)
T 3feg_A          211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY  254 (379)
T ss_dssp             HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred             HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence              2222 23469999999999999876    7899999999864

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=97.26  E-value=0.00082  Score=70.51  Aligned_cols=71  Identities=8%  Similarity=0.132  Sum_probs=47.5

Q ss_pred             ccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccc-eeeeeeeecceeeEEeecC-CCCC
Q 003786          480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV-RLLGCCIELEEKILIYEYM-PNKS  557 (795)
Q Consensus       480 ~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~~~~~~~~~~~lv~E~~-~~gs  557 (795)
                      .+.|+.|....+|+.     +.+++|+....... .....+|+.+++.+...++. +++++  +.+..++++||+ ++..
T Consensus        23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~   94 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQT   94 (301)
T ss_dssp             CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEE
T ss_pred             eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCcc
Confidence            678999999999998     67899988653221 12345788888887543343 45543  344567899999 6655


Q ss_pred             h
Q 003786          558 L  558 (795)
Q Consensus       558 L  558 (795)
                      +
T Consensus        95 l   95 (301)
T 3dxq_A           95 M   95 (301)
T ss_dssp             C
T ss_pred             C
Confidence            5

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=97.16  E-value=0.0042  Score=65.76  Aligned_cols=142  Identities=13%  Similarity=0.165  Sum_probs=83.4

Q ss_pred             cccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcc--cceeeee-----eeecceeeEEeecC
Q 003786          481 NKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRN--LVRLLGC-----CIELEEKILIYEYM  553 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~-----~~~~~~~~lv~E~~  553 (795)
                      ..|+ |....||++...+|+.+++|+..... ...+.+..|..+++.+....  +.+++..     ....+..+++||++
T Consensus        32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i  109 (328)
T 1zyl_A           32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV  109 (328)
T ss_dssp             EEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred             Eeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence            4566 88889999887677789999986431 24567788999888885322  3444443     12234557899999


Q ss_pred             CCCChhh-----h---------hhccC------CcccCChh-------------------hHHHHHHHHHHHHHHHHhc-
Q 003786          554 PNKSLDF-----F---------LFDST------KENLLGWG-------------------TRVRIIEGIAQGLLYLHQY-  593 (795)
Q Consensus       554 ~~gsL~~-----~---------l~~~~------~~~~l~~~-------------------~~~~i~~~i~~~l~~LH~~-  593 (795)
                      +|..+..     .         ++...      .....++.                   ....+...+.+.+..+... 
T Consensus       110 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  189 (328)
T 1zyl_A          110 GGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHW  189 (328)
T ss_dssp             CCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            9865421     0         01000      00111111                   0000111111223333221 


Q ss_pred             ---CCCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          594 ---SRLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       594 ---~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                         ....++|+|+++.|||++ + .+.|+||+.+..
T Consensus       190 ~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~  223 (328)
T 1zyl_A          190 REDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN  223 (328)
T ss_dssp             CSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred             hhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence               234589999999999999 4 899999988764

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=97.12  E-value=0.0021  Score=71.48  Aligned_cols=74  Identities=14%  Similarity=0.128  Sum_probs=49.9

Q ss_pred             ccccCcCCcccEEEeEecC-cceEEEEEecccCccchHHHHHHHHHHHhcCCcccc-eeeeeeeecceeeEEeecCCCCC
Q 003786          480 ENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV-RLLGCCIELEEKILIYEYMPNKS  557 (795)
Q Consensus       480 ~~~LG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~~~~~~~~~~~lv~E~~~~gs  557 (795)
                      .+.|+.|-...+|++...+ ++.+++|+....... .-...+|..+++.|...++. ++++.+.  +  .+|+||++|..
T Consensus       113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~  187 (458)
T 2qg7_A          113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA  187 (458)
T ss_dssp             EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred             EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence            4678889999999998755 478999987543211 11236899999999765554 5676653  2  35999999865


Q ss_pred             h
Q 003786          558 L  558 (795)
Q Consensus       558 L  558 (795)
                      |
T Consensus       188 l  188 (458)
T 2qg7_A          188 L  188 (458)
T ss_dssp             C
T ss_pred             C
Confidence            5

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=97.00  E-value=0.0014  Score=70.86  Aligned_cols=74  Identities=12%  Similarity=0.124  Sum_probs=46.1

Q ss_pred             ccccCcCCcccEEEeEecCc---------ceEEEEEecccCccchHHHHHHHHHHHhcCCccc-ceeeeeeeecceeeEE
Q 003786          480 ENKLGEGGFGPVYKGRLLNG---------QEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNL-VRLLGCCIELEEKILI  549 (795)
Q Consensus       480 ~~~LG~G~~g~Vy~~~~~~~---------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv  549 (795)
                      .+.|+.|....+|++...++         +.+++|+...... .......|..+++.+...++ .++++..    .-++|
T Consensus        38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~----~~~~v  112 (369)
T 3c5i_A           38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTF----NGGRI  112 (369)
T ss_dssp             EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEE----TTEEE
T ss_pred             EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEec----CCcEE
Confidence            35788888899999986542         6788888754321 11234688888888854443 3566543    23789


Q ss_pred             eecCCCCCh
Q 003786          550 YEYMPNKSL  558 (795)
Q Consensus       550 ~E~~~~gsL  558 (795)
                      |||++|..+
T Consensus       113 ~e~i~G~~l  121 (369)
T 3c5i_A          113 EEWLYGDPL  121 (369)
T ss_dssp             EECCCSEEC
T ss_pred             EEEecCCcC
Confidence            999998654

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=96.98  E-value=0.0047  Score=65.61  Aligned_cols=143  Identities=13%  Similarity=0.108  Sum_probs=74.5

Q ss_pred             ccccCcCCccc-EEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCc--ccceeeeeeeecceeeEEeecCCCC
Q 003786          480 ENKLGEGGFGP-VYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHR--NLVRLLGCCIELEEKILIYEYMPNK  556 (795)
Q Consensus       480 ~~~LG~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~~~~~~~~~~lv~E~~~~g  556 (795)
                      .+.|+.|.... +|+....+++.+++|......   .+.+..|+.+++.+...  .+.+++.+..  +.-+++||++.+.
T Consensus        23 ~~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~---~~~~~~e~~~l~~L~~~g~~vP~v~~~d~--~~g~ll~e~l~~~   97 (333)
T 3csv_A           23 RTPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE---GGDTQPFVDLAQYLRNLDISAPEIYAEEH--ARGLLLIEDLGDA   97 (333)
T ss_dssp             ECC--------CCEEEECTTCCEEEEEECCTTT---TCCSHHHHHHHHHHHHTTCBCCCEEEEET--TTTEEEECCCCSC
T ss_pred             eeECCCCCCCceEEEEEcCCCCeEEEEECCCCC---CccccHHHHHHHHHHhCCCCCCceeeecC--CCCEEEEeeCCCc
Confidence            35676665554 677765446778887654321   14456778888777432  3445665532  2237899999876


Q ss_pred             ChhhhhhccC---------------------Cc--ccCChhhHH-------H-------------HHHHHHHHHHHHH--
Q 003786          557 SLDFFLFDST---------------------KE--NLLGWGTRV-------R-------------IIEGIAQGLLYLH--  591 (795)
Q Consensus       557 sL~~~l~~~~---------------------~~--~~l~~~~~~-------~-------------i~~~i~~~l~~LH--  591 (795)
                      .+...+....                     ..  ..++.....       .             ....+.+.+..+.  
T Consensus        98 ~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~  177 (333)
T 3csv_A           98 LFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSA  177 (333)
T ss_dssp             BHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred             chHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence            6643331100                     00  011111000       0             0011112222221  


Q ss_pred             -hcCCCcEEeccCCCCcEEECCC----CCeeeecccccccc
Q 003786          592 -QYSRLRVIHRDLKASNILLDKD----MNPKISDFGMARIF  627 (795)
Q Consensus       592 -~~~~~~iiHrDikp~NIll~~~----~~vkL~DFGla~~~  627 (795)
                       ......++|+|+.+.|||++.+    +.+.|+||+.+...
T Consensus       178 ~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G  218 (333)
T 3csv_A          178 QLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG  218 (333)
T ss_dssp             HCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred             cccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence             1123469999999999999875    67899999998753

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=96.81  E-value=0.005  Score=65.69  Aligned_cols=68  Identities=12%  Similarity=0.087  Sum_probs=44.2

Q ss_pred             CcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCC---cccceeeee------eeecceeeEEeecCC
Q 003786          484 GEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQH---RNLVRLLGC------CIELEEKILIYEYMP  554 (795)
Q Consensus       484 G~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~l~~~------~~~~~~~~lv~E~~~  554 (795)
                      |.|....||+....+| .+++|+.....      ...|+.+++.|..   |++.+.+..      ....+..++||||++
T Consensus        32 G~g~~N~vy~v~~~~g-~~vLK~~~~~~------~~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~  104 (339)
T 3i1a_A           32 GADTNAFAYQADSESK-SYFIKLKYGYH------DEINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIH  104 (339)
T ss_dssp             TSCSSCEEEEEECSSC-EEEEEEEECSS------CCHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCC
T ss_pred             cCccccceEEEEeCCC-CEEEEEecCcc------chHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccC
Confidence            4444678999987666 89999876533      1456666666632   224444432      233466789999999


Q ss_pred             CCCh
Q 003786          555 NKSL  558 (795)
Q Consensus       555 ~gsL  558 (795)
                      |..+
T Consensus       105 G~~~  108 (339)
T 3i1a_A          105 APNG  108 (339)
T ss_dssp             CCBT
T ss_pred             CCcC
Confidence            8765

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=96.52  E-value=0.0052  Score=60.06  Aligned_cols=103  Identities=13%  Similarity=0.015  Sum_probs=65.8

Q ss_pred             CCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcccc
Q 003786          555 NKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQS  634 (795)
Q Consensus       555 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~  634 (795)
                      .-+|.++|..  ....+++++++.++.|.+.+|.-+-... . -..+=+.|..|+|..+|.|.+.+ ..+.         
T Consensus        32 ~vSL~eIL~~--~~~PlsEEqaWALc~Qc~~~L~~~~~~~-~-~~~~i~~~~~i~l~~dG~V~f~~-~~s~---------   97 (229)
T 2yle_A           32 ALSLEEILRL--YNQPINEEQAWAVCYQCCGSLRAAARRR-Q-PRHRVRSAAQIRVWRDGAVTLAP-AADD---------   97 (229)
T ss_dssp             EEEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHTT-C-CCCCCCSGGGEEEETTSCEEECC-C------------
T ss_pred             cccHHHHHHH--cCCCcCHHHHHHHHHHHHHHHHhhhhcc-c-CCceecCCcceEEecCCceeccc-cccc---------
Confidence            3468888843  3457999999999999999987762211 1 11333557999999999998764 1110         


Q ss_pred             cccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCC
Q 003786          635 KTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKR  677 (795)
Q Consensus       635 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~  677 (795)
                           .....+.|||... ...+.+.=|||||+++|..+--..
T Consensus        98 -----~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL  134 (229)
T 2yle_A           98 -----AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGL  134 (229)
T ss_dssp             --------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTC
T ss_pred             -----ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCC
Confidence                 1223466888763 345678889999999999985443

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=95.86  E-value=0.014  Score=64.03  Aligned_cols=74  Identities=12%  Similarity=0.150  Sum_probs=50.2

Q ss_pred             ccccCcCCcccEEEeEecC--------cceEEEEEecccCccchHHHHHHHHHHHhcCCccc-ceeeeeeeecceeeEEe
Q 003786          480 ENKLGEGGFGPVYKGRLLN--------GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNL-VRLLGCCIELEEKILIY  550 (795)
Q Consensus       480 ~~~LG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~  550 (795)
                      ++.|..|-...+|+....+        ++.+++++..... .......+|..+++.+...++ .++++.+    .-++|+
T Consensus        75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~----~~~~I~  149 (424)
T 3mes_A           75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADF----PEGRIE  149 (424)
T ss_dssp             EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEE----TTEEEE
T ss_pred             EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEc----CCCEEE
Confidence            4678888889999998653        5789999875432 222234688999888853333 3555433    237899


Q ss_pred             ecCCCCCh
Q 003786          551 EYMPNKSL  558 (795)
Q Consensus       551 E~~~~gsL  558 (795)
                      ||++|..|
T Consensus       150 efI~G~~l  157 (424)
T 3mes_A          150 EFIDGEPL  157 (424)
T ss_dssp             ECCCSEEC
T ss_pred             EEeCCccC
Confidence            99998764

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=93.96  E-value=0.14  Score=55.81  Aligned_cols=30  Identities=27%  Similarity=0.383  Sum_probs=25.5

Q ss_pred             cEEeccCCCCcEEE------CCCCCeeeeccccccc
Q 003786          597 RVIHRDLKASNILL------DKDMNPKISDFGMARI  626 (795)
Q Consensus       597 ~iiHrDikp~NIll------~~~~~vkL~DFGla~~  626 (795)
                      .++|+|+.+.|||+      +++..+.++||.+|..
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            36899999999999      4567799999999864

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=90.34  E-value=9.3  Score=38.56  Aligned_cols=66  Identities=15%  Similarity=0.224  Sum_probs=42.3

Q ss_pred             CCeEEEecCCCCC--C----ccCcceEEEeeCCceEEeCCCCceEEeecCCCCccccEEEEccCCCeEEeec
Q 003786           70 PDTIVWVANRNSP--I----FDSNAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGNLVVRDN  135 (795)
Q Consensus        70 ~~t~vW~an~~~p--~----~~~~~~l~~~~~g~lvl~~~~~~~~Wst~~~~~~~~~~a~l~d~GNlvl~~~  135 (795)
                      ..+++|...+..+  +    ..+++.+-++.++.+..+|.+|..+|...+........+..+.+||+++-+.
T Consensus        24 tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs~~~~V~~~d~~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~   95 (276)
T 3no2_A           24 TKEIVWEYPLEKGWECNSVAATKAGEILFSYSKGAKMITRDGRELWNIAAPAGCEMQTARILPDGNALVAWC   95 (276)
T ss_dssp             TTEEEEEEECCTTCCCCEEEECTTSCEEEECBSEEEEECTTSCEEEEEECCTTCEEEEEEECTTSCEEEEEE
T ss_pred             CCeEEEEeCCCccCCCcCeEECCCCCEEEeCCCCEEEECCCCCEEEEEcCCCCccccccEECCCCCEEEEec
Confidence            4578888876541  1    1234445556666777788889999999864222223356778888888763

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	795
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	6e-72
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	6e-68
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	1e-67
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-66
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	3e-65
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	4e-64
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	1e-63
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-63
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	7e-63
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	4e-62
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	5e-62
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	7e-62
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	5e-61
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	6e-61
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-60
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	6e-60
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	1e-59
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	1e-59
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-59
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-59
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	3e-59
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-58
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	2e-58
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	1e-57
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	3e-57
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	4e-57
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	7e-56
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	7e-56
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-52
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	7e-52
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	7e-52
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	8e-52
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	5e-50
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	1e-49
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	5e-47
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-46
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	4e-46
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	4e-46
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	7e-46
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	2e-45
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	7e-45
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	1e-44
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	6e-43
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	2e-42
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	4e-42
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	7e-42
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	1e-41
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	1e-41
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	1e-41
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	1e-41
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	2e-40
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	5e-39
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	9e-39
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-38
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	9e-38
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	4e-35
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	2e-34
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	2e-33
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	9e-33
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	6e-31
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	1e-29
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	2e-28
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	1e-26
d1kj1a_	109	b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium	1e-20
d1jpca_	108	b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galan	2e-13
d1dlpa2	120	b.78.1.1 (A:116-235) Fetuin-binding protein Scafet	2e-13
d1dlpa2	120	b.78.1.1 (A:116-235) Fetuin-binding protein Scafet	4e-07
d1b2pa_	119	b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scill	7e-13
d1xd5a_	112	b.78.1.1 (A:) Gastrodianin (antifungal protein) {G	5e-12
d1dlpa1	115	b.78.1.1 (A:1-115) Fetuin-binding protein Scafet p	1e-06
d1dlpa1	115	b.78.1.1 (A:1-115) Fetuin-binding protein Scafet p	2e-05

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  234 bits (599), Expect = 6e-72
 Identities = 66/283 (23%), Positives = 130/283 (45%), Gaps = 19/283 (6%)

Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR 535
             +   ++G G FG VYKG+      V +  +++ + Q  + FKNE+ ++ K +H N++ 
Sbjct: 9   QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 68

Query: 536 LLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSR 595
            +G      +  ++ ++    SL   L     E        + I    AQG+ YLH    
Sbjct: 69  FMGYSTA-PQLAIVTQWCEGSSLYHHLHI--IETKFEMIKLIDIARQTAQGMDYLHA--- 122

Query: 596 LRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ--- 652
             +IHRDLK++NI L +D+  KI DFG+A +        + +++ G+  +M+PE  +   
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182

Query: 653 QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQN 712
           +  +S +SDV++FG++L E ++ +    +SN N+   +               +      
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLP--YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPK 240

Query: 713 EASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLP 755
               L+          C+++   +RP   ++++ +     +LP
Sbjct: 241 AMKRLM--------AECLKKKRDERPLFPQILASIELLARSLP 275

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  223 bits (569), Expect = 6e-68
 Identities = 76/272 (27%), Positives = 124/272 (45%), Gaps = 21/272 (7%)

Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR 535
             +   ++G G FG V+ G  LN  +VA+K +  +    +E+F  E +++ KL H  LV+
Sbjct: 6   ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQ 64

Query: 536 LLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSR 595
           L G C+E     L++E+M +  L  +L    +  L    T + +   + +G+ YL +   
Sbjct: 65  LYGVCLEQAPICLVFEFMEHGCLSDYLRT--QRGLFAAETLLGMCLDVCEGMAYLEE--- 119

Query: 596 LRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGL 655
             VIHRDL A N L+ ++   K+SDFGM R    D+  + +        + SPE      
Sbjct: 120 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-TSSTGTKFPVKWASPEVFSFSR 178

Query: 656 FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEAS 715
           +S KSDV+SFGVL+ E  S  +    + +NS         +      + L  P L +   
Sbjct: 179 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV-------VEDISTGFRLYKPRLAST-- 229

Query: 716 YLILNRYINVGLLCVQEDAADRPTMFEVVSML 747
                    +   C +E   DRP    ++  L
Sbjct: 230 -----HVYQIMNHCWKERPEDRPAFSRLLRQL 256

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  222 bits (568), Expect = 1e-67
 Identities = 83/272 (30%), Positives = 127/272 (46%), Gaps = 21/272 (7%)

Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR 535
                 +LG G FG V+ G      +VAVK L  Q     + F  E  L+ +LQH+ LVR
Sbjct: 14  TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 72

Query: 536 LLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSR 595
           L     + E   +I EYM N SL  FL   +   L      + +   IA+G+ ++ +   
Sbjct: 73  LYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKL-TINKLLDMAAQIAEGMAFIEE--- 127

Query: 596 LRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGL 655
              IHRDL+A+NIL+   ++ KI+DFG+AR+   +E  ++         + +PE    G 
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE-GAKFPIKWTAPEAINYGT 186

Query: 656 FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEAS 715
           F+IKSDV+SFG+LL E ++  R      TN          +   +R + ++ P       
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV-------IQNLERGYRMVRPD------ 233

Query: 716 YLILNRYINVGLLCVQEDAADRPTMFEVVSML 747
                    +  LC +E   DRPT   + S+L
Sbjct: 234 -NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 264

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  219 bits (559), Expect = 1e-66
 Identities = 71/274 (25%), Positives = 120/274 (43%), Gaps = 21/274 (7%)

Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR 535
           + +   +LG G FG V  G+     +VA+K +   S   ++EF  E K++  L H  LV+
Sbjct: 5   DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQ 63

Query: 536 LLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSR 595
           L G C +     +I EYM N  L  +L +    +       + + + + + + YL     
Sbjct: 64  LYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLES--- 118

Query: 596 LRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGL 655
            + +HRDL A N L++     K+SDFG++R    DE  S          +  PE      
Sbjct: 119 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV-GSKFPVRWSPPEVLMYSK 177

Query: 656 FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEAS 715
           FS KSD+++FGVL+ E  S  +                ++ + +    E I   L+    
Sbjct: 178 FSSKSDIWAFGVLMWEIYSLGK--------------MPYERFTNSETAEHIAQGLRLYRP 223

Query: 716 YLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
           +L   +   +   C  E A +RPT   ++S + +
Sbjct: 224 HLASEKVYTIMYSCWHEKADERPTFKILLSNILD 257

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  216 bits (552), Expect = 3e-65
 Identities = 76/286 (26%), Positives = 129/286 (45%), Gaps = 21/286 (7%)

Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR 535
           +   E KLG+G FG V+ G       VA+K L   +    E F  E +++ KL+H  LV+
Sbjct: 18  SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQ 76

Query: 536 LLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSR 595
           L       E   ++ EYM   SL  FL   T + L      V +   IA G+ Y+ +   
Sbjct: 77  LYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYL-RLPQLVDMAAQIASGMAYVERM-- 132

Query: 596 LRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGL 655
              +HRDL+A+NIL+ +++  K++DFG+AR+   +E  ++         + +PE A  G 
Sbjct: 133 -NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIKWTAPEAALYGR 190

Query: 656 FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEAS 715
           F+IKSDV+SFG+LL E  +  R                +    +    + ++   +    
Sbjct: 191 FTIKSDVWSFGILLTELTTKGR--------------VPYPGMVNREVLDQVERGYRMPCP 236

Query: 716 YLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPRQPA 761
                   ++   C +++  +RPT   + + L +   +     QP 
Sbjct: 237 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPG 282

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  214 bits (546), Expect = 4e-64
 Identities = 62/293 (21%), Positives = 114/293 (38%), Gaps = 29/293 (9%)

Query: 480 ENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGC 539
           +  +G+G FG V++G+   G+EVAVK  SS+  +     + EI     L+H N++  +  
Sbjct: 8   QESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAA 65

Query: 540 CIE----LEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ--- 592
             +      +  L+ +Y  + SL  +L        +     +++    A GL +LH    
Sbjct: 66  DNKDNGTWTQLWLVSDYHEHGSLFDYL----NRYTVTVEGMIKLALSTASGLAHLHMEIV 121

Query: 593 --YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF--GGDELQSKTKRIVGTYGYMSP 648
               +  + HRDLK+ NIL+ K+    I+D G+A       D +       VGT  YM+P
Sbjct: 122 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 181

Query: 649 EYAQQGL------FSIKSDVFSFGVLLLETLSSKRNTDFSNTNS-----LTLLGHAWDLW 697
           E     +         ++D+++ G++  E                    L     + +  
Sbjct: 182 EVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEM 241

Query: 698 KDDRAWELIDPTLQNEASYL-ILNRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
           +     + + P + N       L     +   C   + A R T   +   L+ 
Sbjct: 242 RKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 294

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  213 bits (542), Expect = 1e-63
 Identities = 72/273 (26%), Positives = 126/273 (46%), Gaps = 21/273 (7%)

Query: 476 NFSTENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
           + + ++KLG G +G VY+G        VAVK L   + +  EEF  E  ++ +++H NLV
Sbjct: 18  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 76

Query: 535 RLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
           +LLG C       +I E+M   +L  +L +  ++  +     + +   I+  + YL    
Sbjct: 77  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VSAVVLLYMATQISSAMEYLE--- 132

Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG 654
           +   IHRDL A N L+ ++   K++DFG++R+  GD   +          + +PE     
Sbjct: 133 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA-GAKFPIKWTAPESLAYN 191

Query: 655 LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEA 714
            FSIKSDV++FGVLL E  +   +               +      + +EL++   + E 
Sbjct: 192 KFSIKSDVWAFGVLLWEIATYGMSP--------------YPGIDLSQVYELLEKDYRMER 237

Query: 715 SYLILNRYINVGLLCVQEDAADRPTMFEVVSML 747
                 +   +   C Q + +DRP+  E+    
Sbjct: 238 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 270

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  212 bits (541), Expect = 2e-63
 Identities = 74/300 (24%), Positives = 126/300 (42%), Gaps = 36/300 (12%)

Query: 465 FSLASVSAATANFSTE---------NKLGEGGFGPVYKGRLL----NGQEVAVKRL-SSQ 510
           F+    + A   F+ E           +G G FG V  G L         VA+K L S  
Sbjct: 7   FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66

Query: 511 SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENL 570
           + + + +F +E  ++ +  H N++ L G   +    ++I E+M N SLD FL  +  +  
Sbjct: 67  TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQF- 125

Query: 571 LGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD 630
                 V ++ GIA G+ YL        +HRDL A NIL++ ++  K+SDFG++R    D
Sbjct: 126 -TVIQLVGMLRGIAAGMKYLADM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 181

Query: 631 ELQSKTKRIVG---TYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSL 687
                    +G      + +PE  Q   F+  SDV+S+G+++ E +S             
Sbjct: 182 TSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGE---------- 231

Query: 688 TLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML 747
                 +    +      I+   +        +    + L C Q+D   RP   ++V+ L
Sbjct: 232 ----RPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTL 287

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  209 bits (534), Expect = 7e-63
 Identities = 72/273 (26%), Positives = 118/273 (43%), Gaps = 27/273 (9%)

Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR 535
                  +G+G FG V  G    G +VAVK + + +    + F  E  ++ +L+H NLV+
Sbjct: 8   ELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQ 64

Query: 536 LLGCCIELEEKI-LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
           LLG  +E +  + ++ EYM   SL  +L      ++LG    ++    + + + YL    
Sbjct: 65  LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLE--- 120

Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQG 654
               +HRDL A N+L+ +D   K+SDFG+ +     E  S          + +PE  ++ 
Sbjct: 121 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREK 175

Query: 655 LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEA 714
            FS KSDV+SFG+LL E  S  R                +           ++   + +A
Sbjct: 176 KFSTKSDVWSFGILLWEIYSFGR--------------VPYPRIPLKDVVPRVEKGYKMDA 221

Query: 715 SYLILNRYINVGLLCVQEDAADRPTMFEVVSML 747
                     V   C   DAA RP+  ++   L
Sbjct: 222 PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQL 254

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  209 bits (534), Expect = 4e-62
 Identities = 64/298 (21%), Positives = 120/298 (40%), Gaps = 39/298 (13%)

Query: 476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQG-QEEFKNEIKLIAKLQHRNL 533
           +F   ++LG G  G V+K     +G  +A K +  +     + +   E++++ +     +
Sbjct: 7   DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66

Query: 534 VRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY 593
           V   G      E  +  E+M   SLD  L    K   +      ++   + +GL YL   
Sbjct: 67  VGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKVSIAVIKGLTYLR-- 121

Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQ 653
            + +++HRD+K SNIL++     K+ DFG++         S     VGT  YMSPE  Q 
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVGTRSYMSPERLQG 177

Query: 654 GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL----------------------- 690
             +S++SD++S G+ L+E    +      +   L L+                       
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL 237

Query: 691 -GHAWDLWKDDRAWELIDPTLQNEASYLILNRY----INVGLLCVQEDAADRPTMFEV 743
             +  D       +EL+D  +      L    +     +    C+ ++ A+R  + ++
Sbjct: 238 SSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL 295

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  208 bits (529), Expect = 5e-62
 Identities = 70/286 (24%), Positives = 116/286 (40%), Gaps = 30/286 (10%)

Query: 480 ENKLGEGGFGPVYKGRLLN---GQEVAVKRLSSQSGQGQ--EEFKNEIKLIAKLQHRNLV 534
           + +LG G FG V KG        + VAVK L +++      +E   E  ++ +L +  +V
Sbjct: 12  DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 71

Query: 535 RLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
           R++G C E E  +L+ E      L+ +L  +     +     + ++  ++ G+ YL +  
Sbjct: 72  RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH---VKDKNIIELVHQVSMGMKYLEE-- 125

Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD-ELQSKTKRIVGTYGYMSPEYAQQ 653
               +HRDL A N+LL      KISDFG+++    D               + +PE    
Sbjct: 126 -SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 184

Query: 654 GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNE 713
             FS KSDV+SFGVL+ E  S  +                +   K      +++   +  
Sbjct: 185 YKFSSKSDVWSFGVLMWEAFSYGQ--------------KPYRGMKGSEVTAMLEKGERMG 230

Query: 714 ASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN---KTINLPH 756
                     ++  LC   D  +RP    V   L N     +N  H
Sbjct: 231 CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNEGH 276

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  208 bits (529), Expect = 7e-62
 Identities = 68/288 (23%), Positives = 112/288 (38%), Gaps = 25/288 (8%)

Query: 480 ENKLGEGGFGPVYKGRLL---NGQEVAVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNLVR 535
           + +LG G FG V +G         +VA+K L   + +   EE   E +++ +L +  +VR
Sbjct: 14  DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR 73

Query: 536 LLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSR 595
           L+G C + E  +L+ E      L  FL    K   +       ++  ++ G+ YL +   
Sbjct: 74  LIGVC-QAEALMLVMEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEE--- 127

Query: 596 LRVIHRDLKASNILLDKDMNPKISDFGMARIFG-GDELQSKTKRIVGTYGYMSPEYAQQG 654
              +HRDL A N+LL      KISDFG+++  G  D   +          + +PE     
Sbjct: 128 KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFR 187

Query: 655 LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEA 714
            FS +SDV+S+GV + E LS  +                +   K       I+   + E 
Sbjct: 188 KFSSRSDVWSYGVTMWEALSYGQ--------------KPYKKMKGPEVMAFIEQGKRMEC 233

Query: 715 SYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPRQPAF 762
                     +   C      DRP    V   +     +L    +   
Sbjct: 234 PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEGHH 281

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  206 bits (524), Expect = 5e-61
 Identities = 71/300 (23%), Positives = 119/300 (39%), Gaps = 45/300 (15%)

Query: 476 NFSTENKLGEGGFGPVYKGRLLN------GQEVAVKRLSSQ-SGQGQEEFKNEIKLIAKL 528
           N      +GEG FG V++ R            VAVK L  + S   Q +F+ E  L+A+ 
Sbjct: 14  NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF 73

Query: 529 QHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENL------------------ 570
            + N+V+LLG C   +   L++EYM    L+ FL   +   +                  
Sbjct: 74  DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPG 133

Query: 571 ---LGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF 627
              L    ++ I   +A G+ YL +    + +HRDL   N L+ ++M  KI+DFG++R  
Sbjct: 134 PPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNI 190

Query: 628 GGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSL 687
              +             +M PE      ++ +SDV+++GV+L E  S      +   +  
Sbjct: 191 YSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHE- 249

Query: 688 TLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML 747
                     +D       +                N+  LC  +  ADRP+   +  +L
Sbjct: 250 ----EVIYYVRDGNILACPEN---------CPLELYNLMRLCWSKLPADRPSFCSIHRIL 296

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  204 bits (521), Expect = 6e-61
 Identities = 65/273 (23%), Positives = 116/273 (42%), Gaps = 22/273 (8%)

Query: 476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLS-SQSGQGQEEFKNEIKLIAKLQHRNL 533
           ++     LGEG +G V         + VAVK +   ++    E  K EI +   L H N+
Sbjct: 6   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 65

Query: 534 VRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY 593
           V+  G   E   + L  EY     L   +        +      R    +  G++YLH  
Sbjct: 66  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMAGVVYLHG- 121

Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQ 653
             + + HRD+K  N+LLD+  N KISDFG+A +F  +  +    ++ GT  Y++PE  ++
Sbjct: 122 --IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 179

Query: 654 GLF-SIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQN 712
             F +   DV+S G++L   L+ +   D  + +           WK+ + +      + +
Sbjct: 180 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS-----DWKEKKTYLNPWKKIDS 234

Query: 713 EASYLILNRYINVGLLCVQEDAADRPTMFEVVS 745
               L+           + E+ + R T+ ++  
Sbjct: 235 APLALLHK--------ILVENPSARITIPDIKK 259

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  204 bits (521), Expect = 2e-60
 Identities = 81/305 (26%), Positives = 129/305 (42%), Gaps = 37/305 (12%)

Query: 477 FSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLS---SQSGQGQEEFKNEIKLIAKLQHRN 532
           FS   ++G G FG VY  R + N + VA+K++S    QS +  ++   E++ + KL+H N
Sbjct: 17  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76

Query: 533 LVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
            ++  GC +      L+ EY    + D        +  L       +  G  QGL YLH 
Sbjct: 77  TIQYRGCYLREHTAWLVMEYCLGSASDLLEV---HKKPLQEVEIAAVTHGALQGLAYLHS 133

Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ 652
                +IHRD+KA NILL +    K+ DFG A I       +     VGT  +M+PE   
Sbjct: 134 ---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIM------APANSFVGTPYWMAPEVIL 184

Query: 653 ---QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT 709
              +G +  K DV+S G+  +E    K      N N+++ L H                 
Sbjct: 185 AMDEGQYDGKVDVWSLGITCIELAERKPP--LFNMNAMSALYHIAQNESPALQSGHWSEY 242

Query: 710 LQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVS---MLTNKTINLPHPR-QPAFSSI 765
            +N     + +        C+Q+   DRPT   ++    +L  +   +     Q    ++
Sbjct: 243 FRN----FVDS--------CLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLIQRTKDAV 290

Query: 766 RGLKN 770
           R L N
Sbjct: 291 RELDN 295

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  202 bits (514), Expect = 6e-60
 Identities = 74/279 (26%), Positives = 129/279 (46%), Gaps = 26/279 (9%)

Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQE-----VAVKRLSSQSGQGQ-EEFKNEIKLIAKLQ 529
             + +  +G G FG VYKG L          VA+K L +   + Q  +F  E  ++ +  
Sbjct: 8   CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFS 67

Query: 530 HRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLY 589
           H N++RL G   + +  ++I EYM N +LD FL +  K+        V ++ GIA G+ Y
Sbjct: 68  HHNIIRLEGVISKYKPMMIITEYMENGALDKFLRE--KDGEFSVLQLVGMLRGIAAGMKY 125

Query: 590 LHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKT-KRIVGTYGYMSP 648
           L     +  +HRDL A NIL++ ++  K+SDFG++R+   D   + T         + +P
Sbjct: 126 LA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAP 182

Query: 649 EYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP 708
           E      F+  SDV+SFG+++ E ++      +  +N                  + I+ 
Sbjct: 183 EAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN--------------HEVMKAIND 228

Query: 709 TLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML 747
             +        +    + + C Q++ A RP   ++VS+L
Sbjct: 229 GFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSIL 267

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  203 bits (516), Expect = 1e-59
 Identities = 74/277 (26%), Positives = 122/277 (44%), Gaps = 27/277 (9%)

Query: 480 ENKLGEGGFGPVYKGRLLN----GQEVAVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNLV 534
              +G G FG VY G LL+        AVK L+  +  G+  +F  E  ++    H N++
Sbjct: 32  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91

Query: 535 RLLGCCIELEEKI-LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY 593
            LLG C+  E    ++  YM +  L  F+ +  + +       +     +A+G+      
Sbjct: 92  SLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGM---KFL 146

Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKR--IVGTYGYMSPEYA 651
           +  + +HRDL A N +LD+    K++DFG+AR     E  S   +        +M+ E  
Sbjct: 147 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 206

Query: 652 QQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQ 711
           Q   F+ KSDV+SFGVLL E ++      + + N+  +      L +  R   L+ P   
Sbjct: 207 QTQKFTTKSDVWSFGVLLWELMTRGAPP-YPDVNTFDIT---VYLLQGRR---LLQPE-- 257

Query: 712 NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT 748
                   +    V L C    A  RP+  E+VS ++
Sbjct: 258 -----YCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 289

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  202 bits (515), Expect = 1e-59
 Identities = 70/295 (23%), Positives = 111/295 (37%), Gaps = 39/295 (13%)

Query: 476 NFSTENKLGEGGFGPVYKGRLL------NGQEVAVKRLSSQSGQGQ-EEFKNEIKLIAKL 528
             S    LG G FG V +              VAVK L   +   + E   +E+K+++ L
Sbjct: 24  RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL 83

Query: 529 -QHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENL---------------LG 572
             H N+V LLG C      ++I EY     L  FL       +               L 
Sbjct: 84  GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALD 143

Query: 573 WGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL 632
               +     +A+G+ +L        IHRDL A NILL      KI DFG+AR    D  
Sbjct: 144 LEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN 200

Query: 633 QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGH 692
                       +M+PE     +++ +SDV+S+G+ L E  S   +              
Sbjct: 201 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY------------ 248

Query: 693 AWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML 747
              +  D + +++I    +  +         ++   C   D   RPT  ++V ++
Sbjct: 249 -PGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 302

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  202 bits (515), Expect = 2e-59
 Identities = 72/300 (24%), Positives = 115/300 (38%), Gaps = 44/300 (14%)

Query: 476 NFSTENKLGEGGFGPVYKGRLLN------GQEVAVKRLSSQSGQGQ-EEFKNEIKLIAKL 528
           N      LG G FG V               +VAVK L  ++   + E   +E+K++ +L
Sbjct: 38  NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQL 97

Query: 529 -QHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTK-------------------- 567
             H N+V LLG C       LI+EY     L  +L    +                    
Sbjct: 98  GSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEED 157

Query: 568 ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF 627
            N+L +   +     +A+G+ +L        +HRDL A N+L+      KI DFG+AR  
Sbjct: 158 LNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDI 214

Query: 628 GGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSL 687
             D              +M+PE   +G+++IKSDV+S+G+LL E  S      +      
Sbjct: 215 MSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGV-NPYPGIPVD 273

Query: 688 TLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML 747
                          ++LI    + +  +        +   C   D+  RP+   + S L
Sbjct: 274 ANF------------YKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL 321

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  200 bits (510), Expect = 2e-59
 Identities = 63/274 (22%), Positives = 120/274 (43%), Gaps = 30/274 (10%)

Query: 480 ENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQ--SGQGQEEFKNEIKLIAKLQHRNLVRL 536
           + ++G G F  VYKG       EVA   L  +  +   ++ FK E +++  LQH N+VR 
Sbjct: 14  DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRF 73

Query: 537 LGCCIELEEK----ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
                   +     +L+ E M + +L  +L    +  ++           I +GL +LH 
Sbjct: 74  YDSWESTVKGKKCIVLVTELMTSGTLKTYLK---RFKVMKIKVLRSWCRQILKGLQFLHT 130

Query: 593 YSRLRVIHRDLKASNILL-DKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYA 651
            +   +IHRDLK  NI +     + KI D G+A +       S  K ++GT  +M+PE  
Sbjct: 131 RTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA----SFAKAVIGTPEFMAPEMY 185

Query: 652 QQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQ 711
           ++  +    DV++FG+ +LE  +S+    +S   +   +   +            D    
Sbjct: 186 EEK-YDESVDVYAFGMCMLEMATSEYP--YSECQNAAQI---YRRVTSGVKPASFDKVAI 239

Query: 712 NEASYLILNRYINVGLLCVQEDAADRPTMFEVVS 745
            E   +I          C++++  +R ++ ++++
Sbjct: 240 PEVKEIIEG--------CIRQNKDERYSIKDLLN 265

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  200 bits (509), Expect = 3e-59
 Identities = 74/277 (26%), Positives = 121/277 (43%), Gaps = 25/277 (9%)

Query: 476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRL--SSQSGQGQEEFKNEIKLIAKLQHRN 532
           ++     +G G +G   K R   +G+ +  K L   S +   ++   +E+ L+ +L+H N
Sbjct: 5   DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 64

Query: 533 LVRLLGCCIELEEKIL--IYEYMPNKSLDFFLFDSTKEN-LLGWGTRVRIIEGIAQGLLY 589
           +VR     I+     L  + EY     L   +   TKE   L     +R++  +   L  
Sbjct: 65  IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 124

Query: 590 LHQYSR--LRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
            H+ S     V+HRDLK +N+ LD   N K+ DFG+ARI   D   S  K  VGT  YMS
Sbjct: 125 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT--SFAKAFVGTPYYMS 182

Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID 707
           PE   +  ++ KSD++S G LL E  +      F+  +   L G        +  +  I 
Sbjct: 183 PEQMNRMSYNEKSDIWSLGCLLYELCALMPP--FTAFSQKELAGKI-----REGKFRRIP 235

Query: 708 PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVV 744
               +E + +I           +      RP++ E++
Sbjct: 236 YRYSDELNEIITR--------MLNLKDYHRPSVEEIL 264

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  198 bits (505), Expect = 2e-58
 Identities = 61/274 (22%), Positives = 113/274 (41%), Gaps = 26/274 (9%)

Query: 476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
            +    +LG+G FG VYK +        A K + ++S +  E++  EI ++A   H N+V
Sbjct: 13  FWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIV 72

Query: 535 RLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
           +LL          ++ E+    ++D  + +   E  L       + +     L YLH   
Sbjct: 73  KLLDAFYYENNLWILIEFCAGGAVDAVMLE--LERPLTESQIQVVCKQTLDALNYLHD-- 128

Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ-- 652
             ++IHRDLKA NIL   D + K++DFG++          +    +GT  +M+PE     
Sbjct: 129 -NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT--IQRRDSFIGTPYWMAPEVVMCE 185

Query: 653 ---QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT 709
                 +  K+DV+S G+ L+E    +        N + +L     + K +         
Sbjct: 186 TSKDRPYDYKADVWSLGITLIEMAEIEPP--HHELNPMRVL---LKIAKSEPPTLAQPSR 240

Query: 710 LQNEASYLILNRYINVGLLCVQEDAADRPTMFEV 743
             +     +          C++++   R T  ++
Sbjct: 241 WSSNFKDFLKK--------CLEKNVDARWTTSQL 266

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  200 bits (508), Expect = 2e-58
 Identities = 71/308 (23%), Positives = 132/308 (42%), Gaps = 40/308 (12%)

Query: 477 FSTENKLGEGGFGPVYKGRLLNGQE-----VAVKRLS-SQSGQGQEEFKNEIKLIAKLQH 530
           F     LG G FG VYKG  +   E     VA+K L  + S +  +E  +E  ++A + +
Sbjct: 11  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70

Query: 531 RNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYL 590
            ++ RLLG C+      LI + MP   L  ++ +   ++ +G    +     IA+G+ YL
Sbjct: 71  PHVCRLLGICLT-STVQLITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYL 127

Query: 591 HQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEY 650
                 R++HRDL A N+L+    + KI+DFG+A++ G +E +   +       +M+ E 
Sbjct: 128 ED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 184

Query: 651 AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL 710
               +++ +SDV+S+GV + E ++                   +D         +++   
Sbjct: 185 ILHRIYTHQSDVWSYGVTVWELMTFGS--------------KPYDGIPASEISSILEKGE 230

Query: 711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT--------------NKTINLPH 756
           +     +       + + C   DA  RP   E++   +              ++ ++LP 
Sbjct: 231 RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMHLPS 290

Query: 757 PRQPAFSS 764
           P    F  
Sbjct: 291 PTDSNFYR 298

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  196 bits (498), Expect = 1e-57
 Identities = 74/281 (26%), Positives = 108/281 (38%), Gaps = 27/281 (9%)

Query: 476 NFSTENKLGEGGFGPVYKGRLL----NGQEVAVKRLSSQ---SGQGQEEFKNEIKLIAKL 528
           +     KLG+G FG V +G           VAVK L        +  ++F  E+  +  L
Sbjct: 9   DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 68

Query: 529 QHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLL 588
            HRNL+RL G  +      ++ E  P  SL   L     +     GT  R    +A+G+ 
Sbjct: 69  DHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRK--HQGHFLLGTLSRYAVQVAEGMG 125

Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG-GDELQSKTKRIVGTYGYMS 647
           YL      R IHRDL A N+LL      KI DFG+ R     D+     +     + + +
Sbjct: 126 YLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 182

Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID 707
           PE  +   FS  SD + FGV L E  +  +   +   N   +L     + K+       +
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEMFTYGQ-EPWIGLNGSQIL---HKIDKEGERLPRPE 238

Query: 708 PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLT 748
                           NV + C      DRPT   +   L 
Sbjct: 239 D---------CPQDIYNVMVQCWAHKPEDRPTFVALRDFLL 270

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  195 bits (496), Expect = 3e-57
 Identities = 70/279 (25%), Positives = 126/279 (45%), Gaps = 23/279 (8%)

Query: 466 SLASVSAATANFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKL 524
           S+ SV      ++   K+G+G  G VY    +  GQEVA+++++ Q    +E   NEI +
Sbjct: 11  SIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILV 70

Query: 525 IAKLQHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIA 584
           + + ++ N+V  L   +  +E  ++ EY+   SL   + ++  +     G    +     
Sbjct: 71  MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD----EGQIAAVCRECL 126

Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG 644
           Q L +LH     +VIHRD+K+ NILL  D + K++DFG       +  QSK   +VGT  
Sbjct: 127 QALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE--QSKRSTMVGTPY 181

Query: 645 YMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWE 704
           +M+PE   +  +  K D++S G++ +E +  +    + N N L  L   + +  +     
Sbjct: 182 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP--YLNENPLRAL---YLIATNGTPEL 236

Query: 705 LIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEV 743
                L       +          C+  D   R +  E+
Sbjct: 237 QNPEKLSAIFRDFLNR--------CLDMDVEKRGSAKEL 267

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  195 bits (497), Expect = 4e-57
 Identities = 71/290 (24%), Positives = 124/290 (42%), Gaps = 38/290 (13%)

Query: 476 NFSTENKLGEGGFGPVYKGRLLNG---QEVAVKRLS-SQSGQGQEEFKNEIKLIAKL-QH 530
           +   ++ +GEG FG V K R+       + A+KR+    S     +F  E++++ KL  H
Sbjct: 11  DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH 70

Query: 531 RNLVRLLGCCIELEEKILIYEYMPNKSLDFFL-------------FDSTKENLLGWGTRV 577
            N++ LLG C       L  EY P+ +L  FL               ++  + L     +
Sbjct: 71  PNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 130

Query: 578 RIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTK 637
                +A+G+ YL Q    + IHRDL A NIL+ ++   KI+DFG++R     E+  K  
Sbjct: 131 HFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQ---EVYVKKT 184

Query: 638 RIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLW 697
                  +M+ E     +++  SDV+S+GVLL E +S                   +   
Sbjct: 185 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGG--------------TPYCGM 230

Query: 698 KDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML 747
                +E +    + E      +   ++   C +E   +RP+  +++  L
Sbjct: 231 TCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSL 280

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  192 bits (488), Expect = 7e-56
 Identities = 71/302 (23%), Positives = 129/302 (42%), Gaps = 33/302 (10%)

Query: 476 NFSTENKLGEGGFGPVYKGRLLN------GQEVAVKRLS-SQSGQGQEEFKNEIKLIAKL 528
             +   +LG+G FG VY+G             VA+K ++ + S + + EF NE  ++ + 
Sbjct: 21  KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF 80

Query: 529 QHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLF-------DSTKENLLGWGTRVRIIE 581
              ++VRLLG   + +  ++I E M    L  +L        ++           +++  
Sbjct: 81  NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAG 140

Query: 582 GIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVG 641
            IA G+ YL+     + +HRDL A N ++ +D   KI DFGM R     +   K  + + 
Sbjct: 141 EIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 197

Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDR 701
              +MSPE  + G+F+  SDV+SFGV+L E  +                   +    +++
Sbjct: 198 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE--------------QPYQGLSNEQ 243

Query: 702 AWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPRQPA 761
               +      +      +    +  +C Q +   RP+  E++S +  K    P  R+ +
Sbjct: 244 VLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI--KEEMEPGFREVS 301

Query: 762 FS 763
           F 
Sbjct: 302 FY 303

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  190 bits (484), Expect = 7e-56
 Identities = 66/274 (24%), Positives = 112/274 (40%), Gaps = 30/274 (10%)

Query: 476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLS---SQSGQGQEEFKNEIKLIAKLQHR 531
           +F     LG+G FG VY  R   +   +A+K L     +    + + + E+++ + L+H 
Sbjct: 7   DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 66

Query: 532 NLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH 591
           N++RL G   +     LI EY P  ++   L   +K            I  +A  L Y H
Sbjct: 67  NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALSYCH 123

Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYA 651
                RVIHRD+K  N+LL      KI+DFG +          +   + GT  Y+ PE  
Sbjct: 124 S---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMI 176

Query: 652 QQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQ 711
           +  +   K D++S GVL  E L  K    F                 +    + +    +
Sbjct: 177 EGRMHDEKVDLWSLGVLCYEFLVGKP--PFEANTYQETYKRI--SRVEFTFPDFVTEGAR 232

Query: 712 NEASYLILNRYINVGLLCVQEDAADRPTMFEVVS 745
           +     +++R        ++ + + RP + EV+ 
Sbjct: 233 D-----LISR-------LLKHNPSQRPMLREVLE 254

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  181 bits (461), Expect = 2e-52
 Identities = 62/279 (22%), Positives = 109/279 (39%), Gaps = 26/279 (9%)

Query: 476 NFSTENKLGEGGFGPVYKGRLLN----GQEVAVKRLSSQSGQG-QEEFKNEIKLIAKLQH 530
                  +GEG FG V++G  ++       VA+K   + +    +E+F  E   + +  H
Sbjct: 8   RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 67

Query: 531 RNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYL 590
            ++V+L+G   E     +I E      L  FL    ++  L   + +     ++  L YL
Sbjct: 68  PHIVKLIGVITE-NPVWIIMELCTLGELRSFLQV--RKYSLDLASLILYAYQLSTALAYL 124

Query: 591 HQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEY 650
                 R +HRD+ A N+L+  +   K+ DFG++R         K  +      +M+PE 
Sbjct: 125 E---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST-YYKASKGKLPIKWMAPES 180

Query: 651 AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL 710
                F+  SDV+ FGV + E L           N+  +      +   +R    + P  
Sbjct: 181 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI----GRIENGERLP--MPPNC 234

Query: 711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
                 L+          C   D + RP   E+ + L+ 
Sbjct: 235 PPTLYSLMTK--------CWAYDPSRRPRFTELKAQLST 265

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  182 bits (463), Expect = 7e-52
 Identities = 61/271 (22%), Positives = 108/271 (39%), Gaps = 23/271 (8%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
           ++    +LG G FG V++      G   A K + +     +E  + EI+ ++ L+H  LV
Sbjct: 27  HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLV 86

Query: 535 RLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
            L     +  E ++IYE+M    L   + D  + N +     V  +  + +GL ++H   
Sbjct: 87  NLHDAFEDDNEMVMIYEFMSGGELFEKVAD--EHNKMSEDEAVEYMRQVCKGLCHMH--- 141

Query: 595 RLRVIHRDLKASNILLDKDMNP--KISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ 652
               +H DLK  NI+     +   K+ DFG+       +     K   GT  + +PE A+
Sbjct: 142 ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ---SVKVTTGTAEFAAPEVAE 198

Query: 653 QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQN 712
                  +D++S GVL    LS        N +       + D   DD A+  I    ++
Sbjct: 199 GKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKD 258

Query: 713 EASYLILNRYINVGLLCVQEDAADRPTMFEV 743
                 + +        +  D   R T+ + 
Sbjct: 259 -----FIRK-------LLLADPNTRMTIHQA 277

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  180 bits (458), Expect = 7e-52
 Identities = 71/296 (23%), Positives = 112/296 (37%), Gaps = 38/296 (12%)

Query: 476 NFSTENKLGEGGFGPVYKGRLL------NGQEVAVKRLSSQSGQG-QEEFKNEIKLIAK- 527
                  LG G FG V +            + VAVK L   +         +E+K++   
Sbjct: 14  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 73

Query: 528 LQHRNLVRLLGCCIELEEKILI-YEYMPNKSLDFFLF-------------DSTKENLLGW 573
             H N+V LLG C +    +++  E+    +L  +L              +   ++ L  
Sbjct: 74  GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 133

Query: 574 GTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ 633
              +     +A+G+ +L      + IHRDL A NILL +    KI DFG+AR    D   
Sbjct: 134 EHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 190

Query: 634 SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHA 693
            +         +M+PE     +++I+SDV+SFGVLL E  S   +        + +    
Sbjct: 191 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY----PGVKIDEEF 246

Query: 694 WDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
               K+       D                   L C   + + RPT  E+V  L N
Sbjct: 247 CRRLKEGTRMRAPDY---------TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 293

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  180 bits (458), Expect = 8e-52
 Identities = 71/295 (24%), Positives = 119/295 (40%), Gaps = 40/295 (13%)

Query: 476 NFSTENKLGEGGFGPVYKGRLL--------NGQEVAVKRLSSQ-SGQGQEEFKNEIKLIA 526
                  LGEG FG V     +           +VAVK L S  + +   +  +E++++ 
Sbjct: 14  RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 73

Query: 527 KL-QHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLF-------------DSTKENLLG 572
            + +H+N++ LLG C +     +I EY    +L  +L                  E  L 
Sbjct: 74  MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLS 133

Query: 573 WGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL 632
               V     +A+G+ YL      + IHRDL A N+L+ +D   KI+DFG+AR     + 
Sbjct: 134 SKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY 190

Query: 633 QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGH 692
             KT        +M+PE     +++ +SDV+SFGVLL E  +                  
Sbjct: 191 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG--------------S 236

Query: 693 AWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSML 747
            +     +  ++L+    + +      N    +   C     + RPT  ++V  L
Sbjct: 237 PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 291

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  175 bits (444), Expect = 5e-50
 Identities = 65/286 (22%), Positives = 106/286 (37%), Gaps = 30/286 (10%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLS---SQSGQGQEEFKNEIKLIAKLQHR 531
           +F     LGEG F  V   R L   +E A+K L                E  ++++L H 
Sbjct: 9   DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 68

Query: 532 NLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH 591
             V+L     + E+      Y  N  L  ++         G           A+ +  L 
Sbjct: 69  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI------GSFDETCTRFYTAEIVSALE 122

Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYA 651
                 +IHRDLK  NILL++DM+ +I+DFG A++   +  Q++    VGT  Y+SPE  
Sbjct: 123 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 182

Query: 652 QQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQ 711
            +      SD+++ G ++ + ++      F   N   +        K  +          
Sbjct: 183 TEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLI------FQKIIKLEYDFPEKFF 234

Query: 712 NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHP 757
            +A  L+           +  DA  R    E+      K     HP
Sbjct: 235 PKARDLVEK--------LLVLDATKRLGCEEMEGYGPLKA----HP 268

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  176 bits (448), Expect = 1e-49
 Identities = 57/273 (20%), Positives = 112/273 (41%), Gaps = 27/273 (9%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
            +    +LG G FG V++      G+    K +++     +   KNEI ++ +L H  L+
Sbjct: 30  YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLI 89

Query: 535 RLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
            L     +  E +LI E++    L   +  + ++  +     +  +    +GL ++H   
Sbjct: 90  NLHDAFEDKYEMVLILEFLSGGELFDRI--AAEDYKMSEAEVINYMRQACEGLKHMH--- 144

Query: 595 RLRVIHRDLKASNILLDKDMNP--KISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ 652
              ++H D+K  NI+ +       KI DFG+A     DE+    K    T  + +PE   
Sbjct: 145 EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI---VKVTTATAEFAAPEIVD 201

Query: 653 QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGH--AWDLWKDDRAWELIDPTL 710
           +      +D+++ GVL    LS      F+  + L  L +    D   D+ A+  + P  
Sbjct: 202 REPVGFYTDMWAIGVLGYVLLSGLSP--FAGEDDLETLQNVKRCDWEFDEDAFSSVSPEA 259

Query: 711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEV 743
           ++      +          +Q++   R T+ + 
Sbjct: 260 KD-----FIKN-------LLQKEPRKRLTVHDA 280

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  169 bits (428), Expect = 5e-47
 Identities = 69/275 (25%), Positives = 110/275 (40%), Gaps = 31/275 (11%)

Query: 476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQ---SGQGQEEFKNE---IKLIAKL 528
           +FS    +G GGFG VY  R    G+  A+K L  +     QG+    NE   + L++  
Sbjct: 5   DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 64

Query: 529 QHRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLL 588
               +V +       ++   I + M    L + L    +  +            I  GL 
Sbjct: 65  DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS---QHGVFSEADMRFYAAEIILGLE 121

Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSP 648
           ++H      V++RDLK +NILLD+  + +ISD G+A  F     + K    VGT+GYM+P
Sbjct: 122 HMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFS----KKKPHASVGTHGYMAP 174

Query: 649 EYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID 707
           E  Q+G+ +   +D FS G +L + L          T     +     L       +   
Sbjct: 175 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT-LTMAVELPDSFS 233

Query: 708 PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFE 742
           P L++     +L          +Q D   R     
Sbjct: 234 PELRS-----LLEG-------LLQRDVNRRLGCLG 256

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  166 bits (421), Expect = 2e-46
 Identities = 63/322 (19%), Positives = 123/322 (38%), Gaps = 36/322 (11%)

Query: 476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
            +     LG G FG V++     + +    K +  + G  Q   K EI ++   +HRN++
Sbjct: 6   KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNIL 64

Query: 535 RLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
            L      +EE ++I+E++    +   +  +T    L     V  +  + + L +LH   
Sbjct: 65  HLHESFESMEELVMIFEFISGLDIFERI--NTSAFELNEREIVSYVHQVCEALQFLHS-- 120

Query: 595 RLRVIHRDLKASNILLDKDMNP--KISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ 652
              + H D++  NI+     +   KI +FG AR     +     + +     Y +PE  Q
Sbjct: 121 -HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD---NFRLLFTAPEYYAPEVHQ 176

Query: 653 QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQN 712
             + S  +D++S G L+   LS            +       +   D+ A++ I     +
Sbjct: 177 HDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMD 236

Query: 713 EASYLILNRYINVGLLCVQEDAADRPTMFEV---------VSMLTNKTINLPHPRQPAFS 763
                 ++R        + ++   R T  E          +  ++ K I     R+   +
Sbjct: 237 -----FVDR-------LLVKERKSRMTASEALQHPWLKQKIERVSTKVIRTLKHRRYYHT 284

Query: 764 SIRGLKNTILPANGKARVCSGN 785
            I+   N ++ A   AR+  G 
Sbjct: 285 LIKKDLNMVVSA---ARISCGG 303

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  165 bits (418), Expect = 4e-46
 Identities = 62/272 (22%), Positives = 109/272 (40%), Gaps = 26/272 (9%)

Query: 477 FSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEE-FKNEIKLIAKLQHRNLV 534
           +   + LG G F  V         + VA+K ++ ++ +G+E   +NEI ++ K++H N+V
Sbjct: 11  YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIV 70

Query: 535 RLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
            L           LI + +    L   +    ++         R+I  +   + YLH   
Sbjct: 71  ALDDIYESGGHLYLIMQLVSGGELFDRI---VEKGFYTERDASRLIFQVLDAVKYLHDL- 126

Query: 595 RLRVIHRDLKASNILL---DKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYA 651
              ++HRDLK  N+L    D+D    ISDFG++++       S      GT GY++PE  
Sbjct: 127 --GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG---SVLSTACGTPGYVAPEVL 181

Query: 652 QQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQ 711
            Q  +S   D +S GV+    L         N   L       +   D   W+ I  + +
Sbjct: 182 AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAK 241

Query: 712 NEASYLILNRYINVGLLCVQEDAADRPTMFEV 743
           +      +          +++D   R T  + 
Sbjct: 242 D-----FIRH-------LMEKDPEKRFTCEQA 261

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  164 bits (415), Expect = 4e-46
 Identities = 62/281 (22%), Positives = 112/281 (39%), Gaps = 28/281 (9%)

Query: 477 FSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQ---EEFKNEIKLIAKLQHRN 532
           +     LG GG   V+  R L   ++VAVK L +   +       F+ E +  A L H  
Sbjct: 9   YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 68

Query: 533 LVRLLGCCIELEEKI----LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLL 588
           +V +               ++ EY+   +L   +        +     + +I    Q L 
Sbjct: 69  IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALN 125

Query: 589 YLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG-GDELQSKTKRIVGTYGYMS 647
           + H   +  +IHRD+K +NI++      K+ DFG+AR         ++T  ++GT  Y+S
Sbjct: 126 FSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 182

Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID 707
           PE A+      +SDV+S G +L E L+ +      +  S+       D        E + 
Sbjct: 183 PEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLS 242

Query: 708 PTLQNEASYLILNRYINVGLLCVQEDAADRP-TMFEVVSML 747
             L       ++ +        + ++  +R  T  E+ + L
Sbjct: 243 ADLDA-----VVLK-------ALAKNPENRYQTAAEMRADL 271

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  165 bits (419), Expect = 7e-46
 Identities = 66/288 (22%), Positives = 114/288 (39%), Gaps = 26/288 (9%)

Query: 477 FSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQ-EEFKNEIKLIAKLQHRNLV 534
           ++  + +GEG +G V      +N   VA+K++S    Q   +    EIK++ + +H N++
Sbjct: 10  YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 69

Query: 535 RLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
            +         + +   Y+    +   L+   K   L        +  I +GL Y+H   
Sbjct: 70  GINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-- 127

Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKT-KRIVGTYGYMSPEYAQQ 653
              V+HRDLK SN+LL+   + KI DFG+AR+   D   +      V T  Y +PE    
Sbjct: 128 -ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 186

Query: 654 GLFSIKS-DVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQN 712
                KS D++S G +L E LS++    F   + L  L H   +       +L       
Sbjct: 187 SKGYTKSIDIWSVGCILAEMLSNR--PIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 244

Query: 713 EASYLILNRYINVGLL-----------------CVQEDAADRPTMFEV 743
             +YL+   + N                      +  +   R  + + 
Sbjct: 245 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 292

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  162 bits (410), Expect = 2e-45
 Identities = 61/285 (21%), Positives = 116/285 (40%), Gaps = 38/285 (13%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSG---------QGQEEFKNEIKLI 525
           N+  +  LG G    V +       +E AVK +    G         + +E    E+ ++
Sbjct: 4   NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 63

Query: 526 AKLQ-HRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIA 584
            K+  H N+++L           L+++ M    L  +L   T++  L      +I+  + 
Sbjct: 64  RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEKETRKIMRALL 120

Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYG 644
           + +  LH   +L ++HRDLK  NILLD DMN K++DFG +      E   K + + GT  
Sbjct: 121 EVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE---KLREVCGTPS 174

Query: 645 YMSPEYAQ------QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWK 698
           Y++PE  +         +  + D++S GV++   L+            +  +  + +   
Sbjct: 175 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQF 234

Query: 699 DDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEV 743
               W+    T+++     +++R        +      R T  E 
Sbjct: 235 GSPEWDDYSDTVKD-----LVSR-------FLVVQPQKRYTAEEA 267

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  161 bits (407), Expect = 7e-45
 Identities = 51/282 (18%), Positives = 95/282 (33%), Gaps = 24/282 (8%)

Query: 477 FSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR 535
           +    K+G G FG +Y G  +  G+EVA+K    ++     +   E K+   +Q    + 
Sbjct: 9   YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIP 66

Query: 536 LLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSR 595
            +  C    +  ++   +   SL+     +         T + + + +   + Y+H    
Sbjct: 67  TIRWCGAEGDYNVMVMELLGPSLEDL--FNFCSRKFSLKTVLLLADQMISRIEYIH---S 121

Query: 596 LRVIHRDLKASNIL---LDKDMNPKISDFGMARIFGGDELQS-----KTKRIVGTYGYMS 647
              IHRD+K  N L     K     I DFG+A+ +            + K + GT  Y S
Sbjct: 122 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 181

Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID 707
                    S + D+ S G +L+               +           K     E++ 
Sbjct: 182 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 241

Query: 708 PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
               +E +  +          C      D+P    +  +  N
Sbjct: 242 KGYPSEFATYL--------NFCRSLRFDDKPDYSYLRQLFRN 275

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  161 bits (407), Expect = 1e-44
 Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 15/206 (7%)

Query: 476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLS---SQSGQGQEEFKNEIKLIAKLQHR 531
           +F     LG G FG V+  R   NG+  A+K L        +  E   +E  +++ + H 
Sbjct: 5   DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHP 64

Query: 532 NLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH 591
            ++R+ G   + ++  +I +Y+    L   L  S +               +   L YLH
Sbjct: 65  FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFP---NPVAKFYAAEVCLALEYLH 121

Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYA 651
                 +I+RDLK  NILLDK+ + KI+DFG A+      +   T  + GT  Y++PE  
Sbjct: 122 ---SKDIIYRDLKPENILLDKNGHIKITDFGFAK-----YVPDVTYTLCGTPDYIAPEVV 173

Query: 652 QQGLFSIKSDVFSFGVLLLETLSSKR 677
               ++   D +SFG+L+ E L+   
Sbjct: 174 STKPYNKSIDWWSFGILIYEMLAGYT 199

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  156 bits (395), Expect = 6e-43
 Identities = 65/270 (24%), Positives = 101/270 (37%), Gaps = 29/270 (10%)

Query: 476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLS---SQSGQGQEEFKNEIKLIAK-LQH 530
           +F     LG+G FG V+        Q  A+K L           E    E ++++   +H
Sbjct: 3   DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH 62

Query: 531 RNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYL 590
             L  +       E    + EY+    L + +    K               I  GL +L
Sbjct: 63  PFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK---FDLSRATFYAAEIILGLQFL 119

Query: 591 HQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEY 650
           H      +++RDLK  NILLDKD + KI+DFGM +     +  +KT    GT  Y++PE 
Sbjct: 120 HSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD--AKTNTFCGTPDYIAPEI 174

Query: 651 AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL 710
                ++   D +SFGVLL E L  +  + F   +   L                    L
Sbjct: 175 LLGQKYNHSVDWWSFGVLLYEMLIGQ--SPFHGQDEEELFHSIR------MDNPFYPRWL 226

Query: 711 QNEASYLILNRYINVGLLCVQEDAADRPTM 740
           + EA  L++             +   R  +
Sbjct: 227 EKEAKDLLVK--------LFVREPEKRLGV 248

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  154 bits (389), Expect = 2e-42
 Identities = 72/302 (23%), Positives = 123/302 (40%), Gaps = 26/302 (8%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRN 532
           NF    K+GEG +G VYK R  L G+ VA+K  RL +++         EI L+ +L H N
Sbjct: 3   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62

Query: 533 LVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
           +V+LL       +  L++E++      F   D++    +        +  + QGL + H 
Sbjct: 63  IVKLLDVIHTENKLYLVFEFLHQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCHS 120

Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPE-YA 651
           +   RV+HRDLK  N+L++ +   K++DFG+AR FG           V T  Y +PE   
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH--EVVTLWYRAPEILL 175

Query: 652 QQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSL---------TLLGHAWDLWKDDRA 702
               +S   D++S G +  E ++ +      +             T     W        
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 235

Query: 703 WELIDPTLQNEASYLILNRYINVGL----LCVQEDAADRPTMFEVVSM--LTNKTINLPH 756
           ++   P    +    ++      G       +  D   R +    ++     + T  +PH
Sbjct: 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 295

Query: 757 PR 758
            R
Sbjct: 296 LR 297

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  153 bits (387), Expect = 4e-42
 Identities = 43/285 (15%), Positives = 93/285 (32%), Gaps = 26/285 (9%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
           ++    ++GEG FG +++G  LLN Q+VA+K    +S     + ++E +    L     +
Sbjct: 6   HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA--PQLRDEYRTYKLLAGCTGI 63

Query: 535 RLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
             +    +     ++   +   SL+  L            T     + +   +  +H+  
Sbjct: 64  PNVYYFGQEGLHNVLVIDLLGPSLEDLLDL--CGRKFSVKTVAMAAKQMLARVQSIHE-- 119

Query: 595 RLRVIHRDLKASNILLDKDMNP-----KISDFGMARIFGGDELQS-----KTKRIVGTYG 644
              +++RD+K  N L+ +  +       + DFGM + +     +      + K + GT  
Sbjct: 120 -KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTAR 178

Query: 645 YMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWE 704
           YMS         S + D+ + G + +  L            +           K      
Sbjct: 179 YMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLR 238

Query: 705 LIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN 749
            +      E    +                   P    +  + + 
Sbjct: 239 ELCAGFPEEFYKYM--------HYARNLAFDATPDYDYLQGLFSK 275

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score =  152 bits (384), Expect = 7e-42
 Identities = 60/284 (21%), Positives = 112/284 (39%), Gaps = 24/284 (8%)

Query: 476 NFSTENKLGEGGFGPVYKGRLLNGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRNL 533
            +    K+GEG +G VYK +   G+  A+K  RL  +          EI ++ +L+H N+
Sbjct: 3   KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62

Query: 534 VRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY 593
           V+L       +  +L++E++              E  L   T    +  +  G+ Y H  
Sbjct: 63  VKLYDVIHTKKRLVLVFEHLDQDLKKLLDV---CEGGLESVTAKSFLLQLLNGIAYCHDR 119

Query: 594 SRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPE-YAQ 652
              RV+HRDLK  N+L++++   KI+DFG+AR FG      K    + T  Y +P+    
Sbjct: 120 ---RVLHRDLKPQNLLINREGELKIADFGLARAFGIP--VRKYTHEIVTLWYRAPDVLMG 174

Query: 653 QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQN 712
              +S   D++S G +  E ++        +     +         + + W  +    + 
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY 234

Query: 713 EASYLILNRYINVGLL-------------CVQEDAADRPTMFEV 743
           + ++ +         L              ++ D   R T  + 
Sbjct: 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQA 278

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  153 bits (388), Expect = 1e-41
 Identities = 65/318 (20%), Positives = 113/318 (35%), Gaps = 34/318 (10%)

Query: 476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV 534
           +++    +G G FG VY+ +L  +G+ VA+K++     Q +     E++++ KL H N+V
Sbjct: 21  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 76

Query: 535 RLLGCCIELEEK------ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLL 588
           RL        EK       L+ +Y+P          S  +  L        +  + + L 
Sbjct: 77  RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136

Query: 589 YLHQYSRLRVIHRDLKASNILLDKD-MNPKISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
           Y+H      + HRD+K  N+LLD D    K+ DFG A+     E       I   Y    
Sbjct: 137 YIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY--ICSRYYRAP 191

Query: 648 PEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL----------GHAWDLW 697
                   ++   DV+S G +L E L  +    F   + +  L                 
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQPI--FPGDSGVDQLVEIIKVLGTPTREQIRE 249

Query: 698 KDDRAWELIDPTLQNEASYLILNRYINVGLL-----CVQEDAADRPTMFEVVSMLTNKTI 752
            +    E   P ++      +         +      ++     R T  E  +      +
Sbjct: 250 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309

Query: 753 NLPHPRQPAFSSIRGLKN 770
             P+ + P       L N
Sbjct: 310 RDPNVKLPNGRDTPALFN 327

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  152 bits (384), Expect = 1e-41
 Identities = 71/291 (24%), Positives = 119/291 (40%), Gaps = 31/291 (10%)

Query: 476 NFSTENKLGEGGFGPVYKGRLL--NGQEVAVKRLSSQSGQG--QEEFKNEIKLIAKL--- 528
            +    ++GEG +G V+K R L   G+ VA+KR+  Q+G+         E+ ++  L   
Sbjct: 8   QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 67

Query: 529 QHRNLVRLLGCCIELEEKILIYEYMPNKSLD---FFLFDSTKENLLGWGTRVRIIEGIAQ 585
           +H N+VRL   C            +  + +D       D   E  +   T   ++  + +
Sbjct: 68  EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLR 127

Query: 586 GLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGY 645
           GL +LH     RV+HRDLK  NIL+      K++DFG+ARI+     Q     +V T  Y
Sbjct: 128 GLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVTLWY 181

Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDL--------W 697
            +PE   Q  ++   D++S G +  E    K    F  ++ +  LG   D+        W
Sbjct: 182 RAPEVLLQSSYATPVDLWSVGCIFAEMFRRKP--LFRGSSDVDQLGKILDVIGLPGEEDW 239

Query: 698 KDDRAWELIDPTLQNEASYLILNRYINVGLL-----CVQEDAADRPTMFEV 743
             D A        ++          I+         C+  + A R + +  
Sbjct: 240 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 290

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  152 bits (384), Expect = 1e-41
 Identities = 70/309 (22%), Positives = 117/309 (37%), Gaps = 45/309 (14%)

Query: 481 NKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQSGQGQEE-----FKNEIKLIAKLQHRNLV 534
           + LGEG F  VYK R  N  Q VA+K++        ++        EIKL+ +L H N++
Sbjct: 4   DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63

Query: 535 RLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYS 594
            LL          L++++M                +L        +    QGL YLHQ+ 
Sbjct: 64  GLLDAFGHKSNISLVFDFMETDLEVII---KDNSLVLTPSHIKAYMLMTLQGLEYLHQH- 119

Query: 595 RLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQ- 653
              ++HRDLK +N+LLD++   K++DFG+A+ FG           V T  Y +PE     
Sbjct: 120 --WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP--NRAYTHQVVTRWYRAPELLFGA 175

Query: 654 GLFSIKSDVFSFGVLLLETLSSK--------------------RNTDFSNTNSLTLLGHA 693
            ++ +  D+++ G +L E L                         T+    +  +L  + 
Sbjct: 176 RMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYV 235

Query: 694 WDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM--LTNKT 751
                       I     ++   LI              +   R T  + + M   +N+ 
Sbjct: 236 TFKSFPGIPLHHIFSAAGDDLLDLIQG--------LFLFNPCARITATQALKMKYFSNRP 287

Query: 752 INLPHPRQP 760
              P  + P
Sbjct: 288 GPTPGCQLP 296

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  151 bits (383), Expect = 1e-41
 Identities = 63/278 (22%), Positives = 111/278 (39%), Gaps = 32/278 (11%)

Query: 477 FSTENKLGEGGFGPVYKGRLL-NGQEVAVKRL------SSQSGQGQEEFKNEIKLIAKLQ 529
           + T  +LG G F  V K R    G + A K +      SS+ G  +E+ + E+ ++ ++Q
Sbjct: 12  YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71

Query: 530 HRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLY 589
           H N++ L        + ILI E +    L  FL    ++  L        ++ I  G   
Sbjct: 72  HPNVITLHEVYENKTDVILILELVAGGELFDFLA---EKESLTEEEATEFLKQILNG--- 125

Query: 590 LHQYSRLRVIHRDLKASNILLDKDMNP----KISDFGMARIFGGDELQSKTKRIVGTYGY 645
           ++    L++ H DLK  NI+L     P    KI DFG+A         ++ K I GT  +
Sbjct: 126 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG---NEFKNIFGTPEF 182

Query: 646 MSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWEL 705
           ++PE        +++D++S GV+    LS                  A +   +D  +  
Sbjct: 183 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 242

Query: 706 IDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEV 743
                ++      + R        + +D   R T+ + 
Sbjct: 243 TSALAKD-----FIRR-------LLVKDPKKRMTIQDS 268

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  147 bits (372), Expect = 2e-40
 Identities = 60/278 (21%), Positives = 98/278 (35%), Gaps = 42/278 (15%)

Query: 477 FSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEE------FKNEIKLIAKLQ 529
           +     LG GGFG VY G  + +   VA+K +         E         E+ L+ K+ 
Sbjct: 6   YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65

Query: 530 --HRNLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGL 587
                ++RLL      +  +LI E        F     T+   L           + + +
Sbjct: 66  SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSFFWQVLEAV 123

Query: 588 LYLHQYSRLRVIHRDLKASNILLDKD-MNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
            + H      V+HRD+K  NIL+D +    K+ DFG   +       +      GT  Y 
Sbjct: 124 RHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYS 176

Query: 647 SPEY-AQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWEL 705
            PE+          + V+S G+LL + +       F +   +             R    
Sbjct: 177 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP--FEHDEEII------------RGQVF 222

Query: 706 IDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEV 743
               + +E  +LI          C+    +DRPT  E+
Sbjct: 223 FRQRVSSECQHLIRW--------CLALRPSDRPTFEEI 252

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  145 bits (367), Expect = 5e-39
 Identities = 51/274 (18%), Positives = 98/274 (35%), Gaps = 29/274 (10%)

Query: 479 TENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKL-QHRNLVRL 536
           T   LG G  G V +       ++ A+K L     Q   + + E++L  +  Q  ++VR+
Sbjct: 16  TSQVLGLGINGKVLQIFNKRTQEKFALKML-----QDCPKARREVELHWRASQCPHIVRI 70

Query: 537 LGCCIELEEK----ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
           +     L       +++ E +    L   + D   +          I++ I + + YLH 
Sbjct: 71  VDVYENLYAGRKCLLIVMECLDGGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLHS 129

Query: 593 YSRLRVIHRDLKASNILLDKDMNP---KISDFGMARIFGGDELQSKTKRIVGTYGYMSPE 649
              + + HRD+K  N+L          K++DFG A+                T  Y++PE
Sbjct: 130 ---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPE 183

Query: 650 YAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT 709
                 +    D++S GV++   L        ++  +++                     
Sbjct: 184 VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 243

Query: 710 LQNEASYLILNRYINVGLLCVQEDAADRPTMFEV 743
           +  E   LI N         ++ +   R T+ E 
Sbjct: 244 VSEEVKMLIRN--------LLKTEPTQRMTITEF 269

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  144 bits (364), Expect = 9e-39
 Identities = 57/298 (19%), Positives = 113/298 (37%), Gaps = 36/298 (12%)

Query: 476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRL--SSQSGQGQEEFKNEIKLIAKLQHRN 532
            +    K+G+G FG V+K R    GQ+VA+K++   ++          EIK++  L+H N
Sbjct: 11  KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 70

Query: 533 LVRLLGCCIELEEKI--------LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIA 584
           +V L+  C               L++++  +           K          R+++ + 
Sbjct: 71  VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK---FTLSEIKRVMQMLL 127

Query: 585 QGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKR--IVGT 642
            GL Y+H+    +++HRD+KA+N+L+ +D   K++DFG+AR F   +     +    V T
Sbjct: 128 NGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVT 184

Query: 643 YGYMSPEYAQQG-LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSL---------TLLGH 692
             Y  PE       +    D++  G ++ E  +       +              ++   
Sbjct: 185 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 244

Query: 693 AWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLL-------CVQEDAADRPTMFEV 743
            W    +   +E ++     +       +               +  D A R    + 
Sbjct: 245 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDA 302

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  143 bits (360), Expect = 2e-38
 Identities = 59/293 (20%), Positives = 111/293 (37%), Gaps = 40/293 (13%)

Query: 476 NFSTENKLGEGGFGPVYKGRLL-NGQEVAVK--RLSSQSGQGQEEFKNEIKLIAKLQHRN 532
            +    K+GEG +G V+K +     + VA+K  RL             EI L+ +L+H+N
Sbjct: 3   KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62

Query: 533 LVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ 592
           +VRL       ++  L++E+       +F   +      G      +   + Q L  L  
Sbjct: 63  IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCN------GDLDPEIVKSFLFQLLKGLGF 116

Query: 593 YSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQ 652
                V+HRDLK  N+L++++   K+++FG+AR F G  ++  +  +V  +         
Sbjct: 117 CHSRNVLHRDLKPQNLLINRNGELKLANFGLARAF-GIPVRCYSAEVVTLWYRPPDVLFG 175

Query: 653 QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTL----------------------L 690
             L+S   D++S G +  E  ++ R     N     L                       
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD 235

Query: 691 GHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEV 743
              + ++    +   + P L      L+ N         ++ +   R +  E 
Sbjct: 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQN--------LLKCNPVQRISAEEA 280

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  142 bits (358), Expect = 9e-38
 Identities = 60/269 (22%), Positives = 104/269 (38%), Gaps = 28/269 (10%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEE---FKNEIKLIAKLQHR 531
           +F     LG+G FG V   R    G+  A+K L  +    ++E      E +++   +H 
Sbjct: 6   DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65

Query: 532 NLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH 591
            L  L       +    + EY     L F L            T  R     A+ +  L 
Sbjct: 66  FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER------VFTEERARFYGAEIVSALE 119

Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYA 651
                 V++RD+K  N++LDKD + KI+DFG+ +    D   +  K   GT  Y++PE  
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKTFCGTPEYLAPEVL 177

Query: 652 QQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQ 711
           +   +    D +  GV++ E +  +    F N +   L      L ++ R    + P  +
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQDHERLFELI--LMEEIRFPRTLSPEAK 233

Query: 712 NEASYLILNRYINVGLLCVQEDAADRPTM 740
           +     +L          +++D   R   
Sbjct: 234 S-----LLAG-------LLKKDPKQRLGG 250

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  134 bits (338), Expect = 4e-35
 Identities = 65/292 (22%), Positives = 112/292 (38%), Gaps = 38/292 (13%)

Query: 477 FSTENKLGEGGFGPVYKGR-LLNGQEVAVKRL--SSQSGQGQEEFKNEIKLIAKLQHRNL 533
           +     +G G +G V        G +VA+K+L    QS    +    E++L+  ++H N+
Sbjct: 20  YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 79

Query: 534 VRLLGCCIELE------EKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGL 587
           + LL      E      +  L+  +M             K   LG      ++  + +GL
Sbjct: 80  IGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLM-----KHEKLGEDRIQFLVYQMLKGL 134

Query: 588 LYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMS 647
            Y+H      +IHRDLK  N+ +++D   KI DFG+AR     +  S+    V T  Y +
Sbjct: 135 RYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLAR-----QADSEMTGYVVTRWYRA 186

Query: 648 PEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSL---------TLLGHAWDLW 697
           PE     + ++   D++S G ++ E ++ K     S+             T         
Sbjct: 187 PEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRL 246

Query: 698 KDDRAWELIDPTLQNEASYL--ILNRYINVGL----LCVQEDAADRPTMFEV 743
           + D A   +    + E      IL     + +      +  DA  R T  E 
Sbjct: 247 QSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEA 298

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  133 bits (334), Expect = 2e-34
 Identities = 54/267 (20%), Positives = 95/267 (35%), Gaps = 31/267 (11%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQ---SGQGQEEFKNEIKLIAKLQHR 531
            F     LG G FG V   +   +G   A+K L  Q     +  E   NE +++  +   
Sbjct: 42  QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101

Query: 532 NLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH 591
            LV+L     +     ++ EY+    +   L    +               I     YLH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFEYLH 158

Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYA 651
               L +I+RDLK  N+L+D+    +++DFG A+       + +T  + GT   ++PE  
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWTLCGTPEALAPEII 210

Query: 652 QQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQ 711
               ++   D ++ GVL+ E  +      F     + +                      
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP--FFADQPIQIYEKIVSGKVR------FPSHFS 262

Query: 712 NEASYLILNRYINVGLLCVQEDAADRP 738
           ++   L+ N         +Q D   R 
Sbjct: 263 SDLKDLLRN--------LLQVDLTKRF 281

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  129 bits (324), Expect = 2e-33
 Identities = 59/276 (21%), Positives = 107/276 (38%), Gaps = 30/276 (10%)

Query: 476 NFSTENKLGEGGFGPVYKGRLL----NGQEVAVKRLS----SQSGQGQEEFKNEIKLIAK 527
           NF     LG G +G V+  R +     G+  A+K L      Q  +  E  + E +++  
Sbjct: 25  NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 84

Query: 528 LQHR-NLVRLLGCCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQG 586
           ++    LV L        +  LI +Y+    L   L    +       T   +   + + 
Sbjct: 85  IRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERF------TEHEVQIYVGEI 138

Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           +L L    +L +I+RD+K  NILLD + +  ++DFG+++ F  DE   +     GT  YM
Sbjct: 139 VLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADE-TERAYDFCGTIEYM 197

Query: 647 SPEYAQQGL--FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWE 704
           +P+  + G        D +S GVL+ E L+           +         L  +    +
Sbjct: 198 APDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQ 257

Query: 705 LIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTM 740
            +    ++     ++ R        + +D   R   
Sbjct: 258 EMSALAKD-----LIQR-------LLMKDPKKRLGC 281

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score =  127 bits (319), Expect = 9e-33
 Identities = 54/296 (18%), Positives = 108/296 (36%), Gaps = 43/296 (14%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQ-HRNL 533
           ++    KLG G +  V++   + N ++V VK L       +++ K EIK++  L+   N+
Sbjct: 36  DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNI 92

Query: 534 VRLLGCCIELEEK--ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH 591
           + L     +   +   L++E++ N               L        +  I + L Y H
Sbjct: 93  ITLADIVKDPVSRTPALVFEHVNNTDFKQLY------QTLTDYDIRFYMYEILKALDYCH 146

Query: 592 QYSRLRVIHRDLKASNILLD-KDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEY 650
               + ++HRD+K  N+++D +    ++ D+G+A  +   +   +    V +  +  PE 
Sbjct: 147 S---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ---EYNVRVASRYFKGPEL 200

Query: 651 AQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTL------LGHAWDLWKDDRAW 703
                ++    D++S G +L   +  K      + N   L      LG        D+  
Sbjct: 201 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 260

Query: 704 ELIDPTLQNEASYLILNRYINVGLL----------------CVQEDAADRPTMFEV 743
             +DP   +        R+                       ++ D   R T  E 
Sbjct: 261 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 316

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  122 bits (307), Expect = 6e-31
 Identities = 51/210 (24%), Positives = 85/210 (40%), Gaps = 21/210 (10%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLS--SQSGQGQEEFKNEIKLIAKLQHRN 532
            +     +G G  G V      +  + VA+K+LS   Q+    +    E+ L+  + H+N
Sbjct: 18  RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 77

Query: 533 LVRLLGCCI------ELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQG 586
           ++ LL          E ++  L+ E M          +              ++  +  G
Sbjct: 78  IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD------HERMSYLLYQMLCG 131

Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           + +LH      +IHRDLK SNI++  D   KI DFG+AR  G           V T  Y 
Sbjct: 132 IKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYR 185

Query: 647 SPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           +PE      +    D++S G ++ E +  K
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMVRHK 215

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (297), Expect = 1e-29
 Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 11/205 (5%)

Query: 476 NFSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLS--SQSGQGQEEFKNEIKLIAKLQHRN 532
            +   + +G G +G V        G  VAVK+LS   QS    +    E++L+  ++H N
Sbjct: 19  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78

Query: 533 LVRLLGCCIELEEKILI-YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH 591
           ++ LL               Y+    +   L +  K   L       +I  I +GL Y+H
Sbjct: 79  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 138

Query: 592 QYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYA 651
                 +IHRDLK SN+ +++D   KI DFG+AR          T  +   +        
Sbjct: 139 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIML 191

Query: 652 QQGLFSIKSDVFSFGVLLLETLSSK 676
               ++   D++S G ++ E L+ +
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGR 216

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  115 bits (288), Expect = 2e-28
 Identities = 41/215 (19%), Positives = 81/215 (37%), Gaps = 18/215 (8%)

Query: 477 FSTENKLGEGGFGPVYKGR-LLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR 535
           +    KLG G F  V+  + ++N   VA+K +        E  ++EIKL+ ++   +  +
Sbjct: 15  YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVY-TEAAEDEIKLLQRVNDADNTK 73

Query: 536 LLGCCIELEEKILIYEYMPNKSLDFF-------------LFDSTKENLLGWGTRVRIIEG 582
                     K+L +      +                 L    +   +      +I + 
Sbjct: 74  EDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQ 133

Query: 583 IAQGLLYLHQYSRLRVIHRDLKASNILLDK-DMNPKISDFGMARIFGGDELQSKTKRIVG 641
           +  GL Y+H+  R  +IH D+K  N+L++  D    +    +A +             + 
Sbjct: 134 LLLGLDYMHR--RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQ 191

Query: 642 TYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSK 676
           T  Y SPE      +   +D++S   L+ E ++  
Sbjct: 192 TREYRSPEVLLGAPWGCGADIWSTACLIFELITGD 226

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score =  105 bits (263), Expect = 1e-26
 Identities = 34/205 (16%), Positives = 70/205 (34%), Gaps = 33/205 (16%)

Query: 481 NKLGEGGFGPVYKGRLLNGQEVAVK--RLSSQSGQ--------GQEEFKNEIKLIAKLQH 530
             +GEG    V+        E  VK  ++   S +        G   F       A+ + 
Sbjct: 6   KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEF 65

Query: 531 RNLVRLLGCCI----ELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQG 586
           R L +L G  +      E   ++ E +  K L                    +++ I + 
Sbjct: 66  RALQKLQGLAVPKVYAWEGNAVLMELIDAKELYRV----------RVENPDEVLDMILEE 115

Query: 587 LLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYM 646
           +   +      ++H DL   N+L+  +    I DF  +   G +  +   +R V     +
Sbjct: 116 VAKFYHR---GIVHGDLSQYNVLVS-EEGIWIIDFPQSVEVGEEGWREILERDV---RNI 168

Query: 647 SPEYAQQGLFSIKSDVFSFGVLLLE 671
              +++   +  + D+ S    +L+
Sbjct: 169 ITYFSRT--YRTEKDINSAIDRILQ 191

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Length = 109

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

 Score = 85.8 bits (212), Expect = 1e-20
 Identities = 21/118 (17%), Positives = 46/118 (38%), Gaps = 13/118 (11%)

Query: 34  IRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPDTIVWVANRNSPIFDSNAVLTIS 93
           + +GE L  + Q  ++  +     +   L ++      T VW +N             + 
Sbjct: 4   LTNGEGL-YAGQSLDVEPYHFIMQEDCNLVLYD---HSTSVWASNTGILG-KKGCKAVLQ 58

Query: 94  NGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQSFDH 151
           + G  V+ +    ++W+S+  R   N V  L + GN+V+  +         +W +  +
Sbjct: 59  SDGNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVVIYGS--------DIWSTGTY 108

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Length = 108

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Snowdrop (Galanthus nivalis) [TaxId: 4670]

 Score = 65.0 bits (158), Expect = 2e-13
 Identities = 25/126 (19%), Positives = 42/126 (33%), Gaps = 20/126 (15%)

Query: 26  DNITPSRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPDTIVWVANRNSPIFD 85
           + +     +  GE L  +   F              L ++     D  +W  N       
Sbjct: 2   NILYSGETLSTGEFL--NYGSFVFIMQEDCN-----LVLYD---VDKPIWATNTGGL--S 49

Query: 86  SNAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYL 145
            +  L++   G LV+ N +N  IW+SN   +  N V  L    N+V+             
Sbjct: 50  RSCFLSMQTDGNLVVYNPSNKPIWASNTGGQNGNYVCILQKDRNVVIYGTD--------R 101

Query: 146 WQSFDH 151
           W +  H
Sbjct: 102 WATGTH 107

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 120

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

 Score = 64.9 bits (158), Expect = 2e-13
 Identities = 18/97 (18%), Positives = 33/97 (34%), Gaps = 9/97 (9%)

Query: 64  IWYKQIP-DTIVWVANRNSPIFDSNAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVA 122
           I Y     D      +    +  S   L++     LVL ++ +  +WS+N + +     A
Sbjct: 12  ILYSTQGNDNHPQTLHATQSLQLSPYRLSMETDCNLVLFDR-DDRVWSTNTAGKGTGCRA 70

Query: 123 QLLDTGNLVVRDNFSSNSSEDYLWQSFD--HPSDTLL 157
            L   G + V  N         +W S +       + 
Sbjct: 71  VLQPNGRMDVLTN-----QNIAVWTSGNSRSAGRYVF 102

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 120

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

 Score = 47.2 bits (112), Expect = 4e-07
 Identities = 14/64 (21%), Positives = 24/64 (37%)

Query: 71  DTIVWVANRNSPIFDSNAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGNL 130
           D    V + N+    +     +   G++ +L   N  +W+S  SR     V  L    NL
Sbjct: 51  DRDDRVWSTNTAGKGTGCRAVLQPNGRMDVLTNQNIAVWTSGNSRSAGRYVFVLQPDRNL 110

Query: 131 VVRD 134
            +  
Sbjct: 111 AIYG 114

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 119

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Bluebell (Scilla campanulata) [TaxId: 81759]

 Score = 63.5 bits (154), Expect = 7e-13
 Identities = 19/109 (17%), Positives = 38/109 (34%), Gaps = 18/109 (16%)

Query: 40  LVSSSQRFELGFFSPGKSKYRYLGIWYKQIPDTIVWVANRNSPIFDSNAVLTISNGGKLV 99
           ++  +  +     +          + Y    +  +W  N         AVL     G LV
Sbjct: 25  ILFGTHVYRFIMQTDCNL------VLYD--NNNPIWATNTGGLGNGCRAVLQ--PDGVLV 74

Query: 100 LLNQTNGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQS 148
           ++   N T+W S ++ +  + V  L    N+V+  +         LW +
Sbjct: 75  VITNENVTVWQSPVAGKAGHYVLVLQPDRNVVIYGD--------ALWAT 115

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Length = 112

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

 Score = 61.0 bits (147), Expect = 5e-12
 Identities = 26/130 (20%), Positives = 49/130 (37%), Gaps = 18/130 (13%)

Query: 25  ADNITPSRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPDTIVWVANRNSPIF 84
           +D +     +  G  L      +     +          + Y    +  VW +  N    
Sbjct: 1   SDRLNSGHQLDTGGSLAEG--GYLFIIQNDCNL------VLYD--NNRAVWASGTNGKA- 49

Query: 85  DSNAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDY 144
            S  VL + N G LV+ + +   IW+SN +R+  N    L    N+V+ DN ++      
Sbjct: 50  -SGCVLKMQNDGNLVIYSGSR-AIWASNTNRQNGNYYLILQRDRNVVIYDNSNN-----A 102

Query: 145 LWQSFDHPSD 154
           +W +  +  +
Sbjct: 103 IWATHTNVGN 112

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 115

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

 Score = 45.7 bits (108), Expect = 1e-06
 Identities = 17/74 (22%), Positives = 27/74 (36%), Gaps = 5/74 (6%)

Query: 70  PDTIVWVANRNSPIFDSNAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGN 129
            D  VW +N       +     + + G LV+L   N   WSS     + N V  L     
Sbjct: 43  SDVRVWASNTAG---ATGCRAVLQSDGLLVILTAQNTIRWSSGTKGSIGNYVLVLQPDRT 99

Query: 130 LVVRDN--FSSNSS 141
           + +     + S +S
Sbjct: 100 VTIYGPGLWDSGTS 113

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 115

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

 Score = 42.2 bits (99), Expect = 2e-05
 Identities = 21/131 (16%), Positives = 35/131 (26%), Gaps = 39/131 (29%)

Query: 64  IWY-KQIPDTIVWVANRNSPIFDSNAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVA 122
           I +      +     +    +  S+   T+ +   LVL +  +  +W+SN +       A
Sbjct: 3   ILFGLSHEGSHPQTLHAAQSLELSSFRFTMQSDCNLVLFDS-DVRVWASNTAGA-TGCRA 60

Query: 123 QLLDTGNLVVRDNFSSNSSEDYLWQSFDHPSDTLLAGMKLGWDLKTGLERYQTSWKSDDD 182
            L   G LV+       +     W S                                  
Sbjct: 61  VLQSDGLLVIL-----TAQNTIRWSSGTK------------------------------- 84

Query: 183 PSPGNYTHRLD 193
            S GNY   L 
Sbjct: 85  GSIGNYVLVLQ 95

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	795
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1xd5a_	112	Gastrodianin (antifungal protein) {Gastrodia elata	99.88
d1jpca_	108	Lectin (agglutinin) {Snowdrop (Galanthus nivalis)	99.88
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.87
d1kj1a_	109	Lectin (agglutinin) {Garlic (Allium sativum) [TaxI	99.86
d1b2pa_	119	Lectin (agglutinin) {Bluebell (Scilla campanulata)	99.7
d1dlpa2	120	Fetuin-binding protein Scafet precursor {Bluebell	99.65
d1dlpa1	115	Fetuin-binding protein Scafet precursor {Bluebell	99.56
d1dlpa1	115	Fetuin-binding protein Scafet precursor {Bluebell	99.52
d1dlpa2	120	Fetuin-binding protein Scafet precursor {Bluebell	99.38
d1b2pa_	119	Lectin (agglutinin) {Bluebell (Scilla campanulata)	98.95
d1jpca_	108	Lectin (agglutinin) {Snowdrop (Galanthus nivalis)	98.93
d1kj1a_	109	Lectin (agglutinin) {Garlic (Allium sativum) [TaxI	98.76
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.6
d1xd5a_	112	Gastrodianin (antifungal protein) {Gastrodia elata	98.58
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	97.88
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	97.61
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	96.96
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	96.77
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	95.73
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	89.04

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-50  Score=422.61  Aligned_cols=254  Identities=25%  Similarity=0.315  Sum_probs=207.3

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      .++|++.++||+|+||+||+|++. +|+.||||++.... ....+.+.+|+++|++++|||||++++++.+.+..++|||
T Consensus         4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmE   83 (271)
T d1nvra_           4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   83 (271)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEe
Confidence            468999999999999999999875 68999999996543 2345679999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      |+++|+|.+++.   ....+++..+..++.||++||+|||+++   |+||||||+|||+++++.+||+|||+|+......
T Consensus        84 y~~gg~L~~~l~---~~~~l~e~~~~~i~~qi~~al~ylH~~~---IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~  157 (271)
T d1nvra_          84 YCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNN  157 (271)
T ss_dssp             CCTTEEGGGGSB---TTTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred             ccCCCcHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHcC---CccCcccHHHEEECCCCCEEEccchhheeeccCC
Confidence            999999999984   3456899999999999999999999998   9999999999999999999999999999765444


Q ss_pred             ccccccccccccccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccc
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQGLF-SIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL  710 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~~~~-~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l  710 (795)
                      ........+||+.|||||++.+..+ +.++|||||||++|||++|+.||...............     ...        
T Consensus       158 ~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~-----~~~--------  224 (271)
T d1nvra_         158 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE-----KKT--------  224 (271)
T ss_dssp             EECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHT-----TCT--------
T ss_pred             ccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhc-----CCC--------
Confidence            3344456789999999999988775 67899999999999999999999765543332221110     000        


Q ss_pred             cchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       711 ~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ........+..+.+++.+||+.||++|||++|++++
T Consensus       225 ~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  260 (271)
T d1nvra_         225 YLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD  260 (271)
T ss_dssp             TSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             CCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            001111233567789999999999999999999763

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-49  Score=417.86  Aligned_cols=250  Identities=26%  Similarity=0.376  Sum_probs=209.3

Q ss_pred             cCCccccccCcCCcccEEEeEe-cCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecC
Q 003786          475 ANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYM  553 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  553 (795)
                      ++|++.++||+|+||+||+|++ .+|+.||||++........+.+.+|+++|++++|||||++++++.+.+..++|||||
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~   99 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEec
Confidence            5799999999999999999986 469999999998766666788999999999999999999999999999999999999


Q ss_pred             CCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccc
Q 003786          554 PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ  633 (795)
Q Consensus       554 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~  633 (795)
                      ++|+|.+++..    ..+++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++.+....  
T Consensus       100 ~gg~L~~~~~~----~~l~~~~~~~i~~qi~~aL~yLH~~~---iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~--  170 (293)
T d1yhwa1         100 AGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--  170 (293)
T ss_dssp             TTCBHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSTT--
T ss_pred             CCCcHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCcHHHeEECCCCcEeeccchhheeecccc--
Confidence            99999988743    35899999999999999999999998   9999999999999999999999999998765432  


Q ss_pred             ccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccch
Q 003786          634 SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNE  713 (795)
Q Consensus       634 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~  713 (795)
                      .......||+.|||||++.+..|+.++|||||||++|||++|+.||........  .....   .... ..     +  .
T Consensus       171 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~--~~~~~---~~~~-~~-----~--~  237 (293)
T d1yhwa1         171 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA--LYLIA---TNGT-PE-----L--Q  237 (293)
T ss_dssp             CCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH--HHHHH---HHCS-CC-----C--S
T ss_pred             ccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHH--HHHHH---hCCC-CC-----C--C
Confidence            223456899999999999999999999999999999999999999965432221  11110   0000 00     0  1


Q ss_pred             hhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          714 ASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       714 ~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .+...+..+.+++.+||+.||++|||+.|+++|
T Consensus       238 ~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~H  270 (293)
T d1yhwa1         238 NPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH  270 (293)
T ss_dssp             SGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTC
T ss_pred             CcccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            122234567899999999999999999999875

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.8e-50  Score=417.66  Aligned_cols=264  Identities=26%  Similarity=0.412  Sum_probs=205.3

Q ss_pred             ccCCccccccCcCCcccEEEeEecCcceEEEEEeccc--CccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQ--SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      .++|++.++||+|+||.||+|+..  ..||||+++..  .....+.|++|+++|++++|||||++++++.+ ...++|||
T Consensus         7 ~~~~~~~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv~E   83 (276)
T d1uwha_           7 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQ   83 (276)
T ss_dssp             TTCCCCCSEEEECSSCEEEEEESS--SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred             cccEEEEEEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEEEe
Confidence            467999999999999999999863  46999998654  33445789999999999999999999998754 56899999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      ||++|+|.+++...  ...+++..+..++.||++||+|||+++   ||||||||+||||+.++.+||+|||+++......
T Consensus        84 y~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~gl~yLH~~~---ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~  158 (276)
T d1uwha_          84 WCEGSSLYHHLHII--ETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS  158 (276)
T ss_dssp             CCCEEEHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTSSEEECCCCCSCC-----
T ss_pred             cCCCCCHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHhcCC---EeccccCHHHEEEcCCCCEEEccccceeeccccC
Confidence            99999999998543  345899999999999999999999988   9999999999999999999999999998765444


Q ss_pred             cccccccccccccccccccccc---CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCc
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQ---GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP  708 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~---~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~  708 (795)
                      .........||+.|||||++..   ..|+.++|||||||+||||++|+.||......... .............      
T Consensus       159 ~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~-~~~~~~~~~~p~~------  231 (276)
T d1uwha_         159 GSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI-IFMVGRGYLSPDL------  231 (276)
T ss_dssp             -------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH-HHHHHHTSCCCCG------
T ss_pred             CcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHH-HHHHhcCCCCCcc------
Confidence            3344456789999999999864   45899999999999999999999999754432221 1111111111110      


Q ss_pred             cccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccccCCCC
Q 003786          709 TLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLP  755 (795)
Q Consensus       709 ~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~~~l~  755 (795)
                         ...+...+..+.+++.+||+.||++|||++||+++|+.....+|
T Consensus       232 ---~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~~P  275 (276)
T d1uwha_         232 ---SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLP  275 (276)
T ss_dssp             ---GGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred             ---hhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHcCC
Confidence               11222344678899999999999999999999999987655444

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-49  Score=413.19  Aligned_cols=246  Identities=26%  Similarity=0.358  Sum_probs=206.7

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEeccc---CccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQ---SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      ++|++.+.||+|+||+||+|++. +++.||||++.+.   .....+.+.+|+++|++++|||||++++++.+++..++||
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm   85 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL   85 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence            67999999999999999999875 5889999998653   2344678899999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      |||++|+|.+++..   ...+++..+..++.||++||+|||+++   |+||||||+|||++.++.+||+|||+++.....
T Consensus        86 Ey~~~g~L~~~l~~---~~~l~e~~~~~i~~qi~~al~~lH~~~---ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~  159 (263)
T d2j4za1          86 EYAPLGTVYRELQK---LSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS  159 (263)
T ss_dssp             ECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCSCSCCCCC
T ss_pred             eecCCCcHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeeeeccccceecCCCCEeecccceeeecCCC
Confidence            99999999999843   345899999999999999999999998   999999999999999999999999999865433


Q ss_pred             cccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccc
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL  710 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l  710 (795)
                          ......||+.|||||++.+..|+.++|||||||++|||++|+.||+..+....  ....    ....      .. 
T Consensus       160 ----~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~--~~~i----~~~~------~~-  222 (263)
T d2j4za1         160 ----RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--YKRI----SRVE------FT-  222 (263)
T ss_dssp             ----CCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH--HHHH----HTTC------CC-
T ss_pred             ----cccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHH--HHHH----HcCC------CC-
Confidence                23446899999999999999999999999999999999999999975432221  1111    0111      00 


Q ss_pred             cchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       711 ~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                         .+...+..+.+++.+||+.||++|||++|+++|
T Consensus       223 ---~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~h  255 (263)
T d2j4za1         223 ---FPDFVTEGARDLISRLLKHNPSQRPMLREVLEH  255 (263)
T ss_dssp             ---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred             ---CCccCCHHHHHHHHHHccCCHhHCcCHHHHHcC
Confidence               111234567889999999999999999999974

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-49  Score=414.06  Aligned_cols=253  Identities=29%  Similarity=0.447  Sum_probs=198.9

Q ss_pred             cCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCC
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMP  554 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~  554 (795)
                      ++|++.++||+|+||.||+|++.+++.||||++... ....++|.+|++++++++|||||++++++.+.+..++||||++
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~   83 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME   83 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSS-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred             HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCC-cCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecC
Confidence            578999999999999999999988889999999753 4556789999999999999999999999999999999999999


Q ss_pred             CCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcccc
Q 003786          555 NKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQS  634 (795)
Q Consensus       555 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~  634 (795)
                      +|+|.+++...  ...+++..+..++.||++||.|||+++   |+||||||+||||+.++.+||+|||+++........ 
T Consensus        84 ~g~L~~~l~~~--~~~~~~~~~~~i~~qia~gl~~lH~~~---iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~-  157 (263)
T d1sm2a_          84 HGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-  157 (263)
T ss_dssp             TCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCTTCSGGGEEECGGGCEEECSCC------------
T ss_pred             CCcHHHHhhcc--ccCCCHHHHHHHHHHHHHHHHhhhccc---eeecccchhheeecCCCCeEecccchheeccCCCce-
Confidence            99999988543  345889999999999999999999988   999999999999999999999999999876543322 


Q ss_pred             cccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCC-CCCCCCcchhHhHhHhhhccCcccccccCccccch
Q 003786          635 KTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRN-TDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNE  713 (795)
Q Consensus       635 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~  713 (795)
                      ......||+.|||||++.+..|+.++|||||||++|||++++.| ++....  .........   ..   ...       
T Consensus       158 ~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~--~~~~~~i~~---~~---~~~-------  222 (263)
T d1sm2a_         158 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN--SEVVEDIST---GF---RLY-------  222 (263)
T ss_dssp             -------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCH--HHHHHHHHH---TC---CCC-------
T ss_pred             eecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCH--HHHHHHHHh---cC---CCC-------
Confidence            22345789999999999999999999999999999999996544 433221  111211111   00   011       


Q ss_pred             hhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          714 ASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       714 ~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      .+...+.++.+++.+||+.||++||||+||+++|+.
T Consensus       223 ~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~  258 (263)
T d1sm2a_         223 KPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAE  258 (263)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CccccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHH
Confidence            111234567899999999999999999999999976

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=6.9e-49  Score=413.84  Aligned_cols=257  Identities=28%  Similarity=0.395  Sum_probs=211.2

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      .++|++.++||+|+||+||+|++. +++.||||++... ....++|.+|+++|++++|||||+++++|.+.+..++||||
T Consensus        16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~   94 (287)
T d1opja_          16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF   94 (287)
T ss_dssp             GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTT-CSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCc-cchHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeec
Confidence            467899999999999999999875 5889999998654 34567899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      |++|+|..++... ....+++..+..++.||++||.|||+++   |+||||||+||||+.++.+||+|||+++.......
T Consensus        95 ~~~g~l~~~l~~~-~~~~~~~~~~~~i~~qi~~gL~yLH~~~---iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~  170 (287)
T d1opja_          95 MTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY  170 (287)
T ss_dssp             CTTCBHHHHHHHS-CTTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSS
T ss_pred             ccCcchHHHhhhc-cccchHHHHHHHHHHHHHHHHHHHHHCC---cccCccccCeEEECCCCcEEEccccceeecCCCCc
Confidence            9999999998543 3356899999999999999999999998   99999999999999999999999999997654432


Q ss_pred             cccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccc
Q 003786          633 QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQN  712 (795)
Q Consensus       633 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~  712 (795)
                      . ......|++.|||||++.+..|+.++|||||||++|||++|+.|+........ ....    ...+         ...
T Consensus       171 ~-~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~-~~~~----i~~~---------~~~  235 (287)
T d1opja_         171 T-AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYEL----LEKD---------YRM  235 (287)
T ss_dssp             E-EETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH-HHHH----HHTT---------CCC
T ss_pred             e-eeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHH-HHHH----HhcC---------CCC
Confidence            2 23335689999999999999999999999999999999998776543222111 1111    1111         111


Q ss_pred             hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          713 EASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       713 ~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                      ..+...+.++.+|+.+||+.||++|||++||+++|+..
T Consensus       236 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~  273 (287)
T d1opja_         236 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM  273 (287)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             CCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            12223445788999999999999999999999998763

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.3e-49  Score=413.60  Aligned_cols=250  Identities=24%  Similarity=0.309  Sum_probs=204.0

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEeccc---CccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQ---SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      ++|++++.||+|+||+||+|++. +++.||||++.+.   .....+.+.+|+++|++++|||||++++++.+.+..++||
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm   87 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL   87 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence            67999999999999999999874 6899999999653   2344577999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      |||++|+|.+++..   .+.+++..+..++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+++.+...
T Consensus        88 Ey~~gg~L~~~~~~---~~~l~e~~~~~~~~qi~~al~ylH~~~---iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~  161 (288)
T d1uu3a_          88 SYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE  161 (288)
T ss_dssp             CCCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred             EccCCCCHHHhhhc---cCCCCHHHHHHHHHHHHHHHHhhcccc---EEcCcCCccccccCCCceEEecccccceecccC
Confidence            99999999988843   346899999999999999999999998   999999999999999999999999999987654


Q ss_pred             cccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccc
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL  710 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l  710 (795)
                      ..........||+.|||||++.+..|+.++|||||||++|||++|+.||...+....  ....   . ....      .+
T Consensus       162 ~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~--~~~i---~-~~~~------~~  229 (288)
T d1uu3a_         162 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI--FQKI---I-KLEY------DF  229 (288)
T ss_dssp             --------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHH---H-TTCC------CC
T ss_pred             CcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHH--HHHH---H-cCCC------CC
Confidence            444444557899999999999999999999999999999999999999975432221  1111   0 0110      01


Q ss_pred             cchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       711 ~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                          +......+.++|.+||+.||++|||++|++++
T Consensus       230 ----p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~  261 (288)
T d1uu3a_         230 ----PEKFFPKARDLVEKLLVLDATKRLGCEEMEGY  261 (288)
T ss_dssp             ----CTTCCHHHHHHHHTTSCSSGGGSTTSGGGTCH
T ss_pred             ----CccCCHHHHHHHHHHccCCHhHCcCHHHHcCC
Confidence                11233567899999999999999999997543

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.5e-49  Score=413.29  Aligned_cols=252  Identities=25%  Similarity=0.356  Sum_probs=207.7

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecC
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYM  553 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  553 (795)
                      +.|++.++||+|+||.||+|++. +++.||||++........+.+.+|+++|++++|||||++++++.+.+..++|||||
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~   91 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC   91 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecC
Confidence            56899999999999999999864 58899999998776677788999999999999999999999999999999999999


Q ss_pred             CCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccc
Q 003786          554 PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ  633 (795)
Q Consensus       554 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~  633 (795)
                      ++|+|..++...  ...+++..+..++.||++||.|||+++   |+||||||+|||++.++.+||+|||+++.....  .
T Consensus        92 ~~g~L~~~~~~~--~~~l~e~~~~~i~~qi~~gL~ylH~~~---ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~--~  164 (288)
T d2jfla1          92 AGGAVDAVMLEL--ERPLTESQIQVVCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT--I  164 (288)
T ss_dssp             TTEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECHHH--H
T ss_pred             CCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---EEEeecChhheeECCCCCEEEEechhhhccCCC--c
Confidence            999999987432  345899999999999999999999998   999999999999999999999999999764322  1


Q ss_pred             ccccccccccccccccccc-----cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCc
Q 003786          634 SKTKRIVGTYGYMSPEYAQ-----QGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP  708 (795)
Q Consensus       634 ~~~~~~~gt~~y~APE~~~-----~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~  708 (795)
                      .......||+.|||||++.     ...|+.++|||||||++|||++|+.||........  ....   .... ...    
T Consensus       165 ~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~--~~~i---~~~~-~~~----  234 (288)
T d2jfla1         165 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRV--LLKI---AKSE-PPT----  234 (288)
T ss_dssp             HHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH--HHHH---HHSC-CCC----
T ss_pred             ccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHH--HHHH---HcCC-CCC----
Confidence            2234568999999999883     45689999999999999999999999975443222  1111   0111 000    


Q ss_pred             cccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          709 TLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       709 ~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                       +  ..+...+..+.+++.+||+.||++|||++|+++|
T Consensus       235 -~--~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~h  269 (288)
T d2jfla1         235 -L--AQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQH  269 (288)
T ss_dssp             -C--SSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             -C--CccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence             0  1112234577899999999999999999999874

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.6e-49  Score=411.05  Aligned_cols=255  Identities=31%  Similarity=0.453  Sum_probs=207.0

Q ss_pred             ccCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecC
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYM  553 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  553 (795)
                      .++|++.++||+|+||.||+|++.+++.||||++... ....+.|.+|+++|++++|||||++++++.+ +..++||||+
T Consensus        12 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~Ey~   89 (272)
T d1qpca_          12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYM   89 (272)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred             HHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccC-cCCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEEEeC
Confidence            3679999999999999999999988889999999654 3456789999999999999999999998754 5679999999


Q ss_pred             CCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccc
Q 003786          554 PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ  633 (795)
Q Consensus       554 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~  633 (795)
                      ++|+|.+++... ....+++..+..++.||++||.|||+++   |+||||||+||||+.++.+||+|||+++....... 
T Consensus        90 ~~g~L~~~~~~~-~~~~l~~~~~~~i~~qi~~gl~~lH~~~---ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~-  164 (272)
T d1qpca_          90 ENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-  164 (272)
T ss_dssp             TTCBHHHHTTSH-HHHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE-
T ss_pred             CCCcHHHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccchhheeeecccceeeccccceEEccCCcc-
Confidence            999999887432 2235899999999999999999999988   99999999999999999999999999998754432 


Q ss_pred             ccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccch
Q 003786          634 SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNE  713 (795)
Q Consensus       634 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~  713 (795)
                      .......||+.|||||++.+..++.++|||||||++|||++|+.|+....... ......    ..+.         ...
T Consensus       165 ~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~-~~~~~i----~~~~---------~~~  230 (272)
T d1qpca_         165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-EVIQNL----ERGY---------RMV  230 (272)
T ss_dssp             ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-HHHHHH----HTTC---------CCC
T ss_pred             ccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHH-HHHHHH----HhcC---------CCC
Confidence            22334678999999999999999999999999999999999766654322211 111111    1110         011


Q ss_pred             hhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          714 ASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       714 ~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      .+...+..+.+++.+||+.||++||||+||+++|+.
T Consensus       231 ~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~  266 (272)
T d1qpca_         231 RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED  266 (272)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhh
Confidence            112234568899999999999999999999998875

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-49  Score=414.32  Aligned_cols=255  Identities=27%  Similarity=0.383  Sum_probs=195.2

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeee--cceeeEE
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIE--LEEKILI  549 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv  549 (795)
                      ++|++.+.||+|+||.||+|+.. +|+.||||++....  ....+.+.+|+++|++++|||||++++++.+  ....++|
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv   83 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV   83 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence            67999999999999999999864 68999999986643  2334678899999999999999999999865  4567899


Q ss_pred             eecCCCCChhhhhhccC-CcccCChhhHHHHHHHHHHHHHHHHhcC--CCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          550 YEYMPNKSLDFFLFDST-KENLLGWGTRVRIIEGIAQGLLYLHQYS--RLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~--~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                      ||||++|+|.+++.... ....+++..+..++.||+.||.|||+++  ..+|+||||||+||||+.++.+||+|||+++.
T Consensus        84 mEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~  163 (269)
T d2java1          84 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI  163 (269)
T ss_dssp             EECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHH
T ss_pred             EecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceee
Confidence            99999999999885432 3456999999999999999999999875  23599999999999999999999999999998


Q ss_pred             cCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCccccccc
Q 003786          627 FGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELI  706 (795)
Q Consensus       627 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i  706 (795)
                      .....  .......||+.|||||++.+..|+.++|||||||++|||++|+.||...+...  .....    ......   
T Consensus       164 ~~~~~--~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~--~~~~i----~~~~~~---  232 (269)
T d2java1         164 LNHDT--SFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE--LAGKI----REGKFR---  232 (269)
T ss_dssp             C-------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHH----HHTCCC---
T ss_pred             cccCC--CccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHH--HHHHH----HcCCCC---
Confidence            65432  22345789999999999999999999999999999999999999997543222  11111    111111   


Q ss_pred             CccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          707 DPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       707 d~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                            ..+...+..+.+++.+||+.||++|||++|++++
T Consensus       233 ------~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~h  266 (269)
T d2java1         233 ------RIPYRYSDELNEIITRMLNLKDYHRPSVEEILEN  266 (269)
T ss_dssp             ------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             ------CCCcccCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence                  1111234568899999999999999999999874

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.5e-49  Score=420.52  Aligned_cols=263  Identities=23%  Similarity=0.292  Sum_probs=205.3

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      .++|++.++||+|+||+||+|++. +|+.||||++.... ....+++.+|+.+|++++|||||+++++|.+.++.++|||
T Consensus         5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmE   84 (322)
T d1s9ja_           5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   84 (322)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence            478999999999999999999864 68999999997543 3335678999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhc-CCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY-SRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      ||++|+|.+++..   .+.+++..+..++.||++||.|||++ +   |+||||||+||||+.++.+||+|||+|+.... 
T Consensus        85 y~~gg~L~~~l~~---~~~l~~~~~~~~~~qil~aL~yLH~~~~---IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~-  157 (322)
T d1s9ja_          85 HMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-  157 (322)
T ss_dssp             CCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEECCCCCCHHHHH-
T ss_pred             cCCCCcHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHhCC---EEccccCHHHeeECCCCCEEEeeCCCccccCC-
Confidence            9999999999853   34589999999999999999999974 6   99999999999999999999999999986532 


Q ss_pred             cccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCc----------
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDD----------  700 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~----------  700 (795)
                         ......+||+.|||||++.+..|+.++||||+||++|||++|+.||...+.................          
T Consensus       158 ---~~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (322)
T d1s9ja_         158 ---SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPG  234 (322)
T ss_dssp             ---HTC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC-------------------
T ss_pred             ---CccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccccccc
Confidence               2234578999999999999999999999999999999999999999765533321111000000000          


Q ss_pred             c-cc-cccCcccc----------------chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          701 R-AW-ELIDPTLQ----------------NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       701 ~-~~-~~id~~l~----------------~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      . .. ...+....                ..........+.+++.+||+.||++|||++|+++|
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~H  298 (322)
T d1s9ja_         235 RPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH  298 (322)
T ss_dssp             -----------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             ccccccccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence            0 00 00000000                00000123467889999999999999999999985

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-48  Score=403.75  Aligned_cols=253  Identities=27%  Similarity=0.396  Sum_probs=211.9

Q ss_pred             cCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCC
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMP  554 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~  554 (795)
                      ++|++.++||+|+||+||+|++++++.||||++++. ....++|.+|+.++++++|||||++++++.+.+..++||||++
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~-~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~   82 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA   82 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESS-SSCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCT
T ss_pred             HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcC-cCCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccC
Confidence            689999999999999999999988889999999754 3456789999999999999999999999999999999999999


Q ss_pred             CCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcccc
Q 003786          555 NKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQS  634 (795)
Q Consensus       555 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~  634 (795)
                      +|+|..++...  ...+++..+.+++.||++||.|||+++   |+||||||+|||++.++.+||+|||+++........ 
T Consensus        83 ~g~l~~~~~~~--~~~~~~~~~~~i~~qi~~gl~~LH~~~---iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~-  156 (258)
T d1k2pa_          83 NGCLLNYLREM--RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT-  156 (258)
T ss_dssp             TEEHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHTT---BCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCC-
T ss_pred             CCcHHHhhhcc--ccCCcHHHHHHHHHHHHHHHHHHhhcC---cccccccceeEEEcCCCcEEECcchhheeccCCCce-
Confidence            99999887433  345889999999999999999999988   999999999999999999999999999876544332 


Q ss_pred             cccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCccccch
Q 003786          635 KTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNE  713 (795)
Q Consensus       635 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~  713 (795)
                      ......||+.|+|||++.+..++.++|||||||++|||++ |+.||+.......  ....    ..+..         ..
T Consensus       157 ~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~--~~~i----~~~~~---------~~  221 (258)
T d1k2pa_         157 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET--AEHI----AQGLR---------LY  221 (258)
T ss_dssp             CCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHH--HHHH----HTTCC---------CC
T ss_pred             eecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHH--HHHH----HhCCC---------CC
Confidence            2334678999999999999999999999999999999998 7888876543222  1111    11110         11


Q ss_pred             hhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          714 ASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       714 ~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      .+...+..+.+++.+||+.||++|||++||+++|..
T Consensus       222 ~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~d  257 (258)
T d1k2pa_         222 RPHLASEKVYTIMYSCWHEKADERPTFKILLSNILD  257 (258)
T ss_dssp             CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHC
T ss_pred             CcccccHHHHHHHHHHccCCHhHCcCHHHHHHHhhC
Confidence            112233578899999999999999999999999854

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-48  Score=419.30  Aligned_cols=258  Identities=28%  Similarity=0.402  Sum_probs=207.5

Q ss_pred             cCCccccccCcCCcccEEEeEecC-c-----ceEEEEEeccc-CccchHHHHHHHHHHHhc-CCcccceeeeeeeeccee
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLN-G-----QEVAVKRLSSQ-SGQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEEK  546 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~-~-----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~  546 (795)
                      ++|++.++||+|+||+||+|+... +     ..||||++... .......+.+|+.+|.++ +|||||++++++.+.+..
T Consensus        37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~  116 (325)
T d1rjba_          37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPI  116 (325)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeE
Confidence            679999999999999999998643 2     36999998654 334456789999999998 899999999999999999


Q ss_pred             eEEeecCCCCChhhhhhccCC--------------------cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCC
Q 003786          547 ILIYEYMPNKSLDFFLFDSTK--------------------ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKAS  606 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~--------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~  606 (795)
                      ++|||||++|+|.+++.....                    ...+++..+..++.||++||+|||+++   ||||||||+
T Consensus       117 ~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~---IiHRDlKp~  193 (325)
T d1rjba_         117 YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAAR  193 (325)
T ss_dssp             EEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEETTCSGG
T ss_pred             EEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCchh
Confidence            999999999999999965432                    235889999999999999999999998   999999999


Q ss_pred             cEEECCCCCeeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCc
Q 003786          607 NILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTN  685 (795)
Q Consensus       607 NIll~~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~  685 (795)
                      |||++.++.+||+|||+|+...............||+.|||||++.+..|+.++|||||||++|||++ |+.||......
T Consensus       194 Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~  273 (325)
T d1rjba_         194 NVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD  273 (325)
T ss_dssp             GEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS
T ss_pred             ccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHH
Confidence            99999999999999999987654443333445678999999999999999999999999999999997 89998764433


Q ss_pred             chhHhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          686 SLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       686 ~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      .. +....    ..+.         ....+...+..+.+||.+||+.||++|||++||+++|.-
T Consensus       274 ~~-~~~~~----~~~~---------~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~  323 (325)
T d1rjba_         274 AN-FYKLI----QNGF---------KMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGC  323 (325)
T ss_dssp             HH-HHHHH----HTTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HH-HHHHH----hcCC---------CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHhC
Confidence            22 11111    1111         111222334578899999999999999999999999953

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-48  Score=407.57  Aligned_cols=265  Identities=29%  Similarity=0.416  Sum_probs=207.7

Q ss_pred             cCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCC
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMP  554 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~  554 (795)
                      ++|++.+.||+|+||.||+|++.+++.||||++... ....+.|.+|+.+|++++|||||++++++. .+..++||||++
T Consensus        17 ~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~-~~~~~lv~Ey~~   94 (285)
T d1fmka3          17 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMS   94 (285)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEECCCT
T ss_pred             HHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcc-cCCHHHHHHHHHHHHhcccCCEeEEEEEEe-cCCeEEEEEecC
Confidence            679999999999999999999988888999999644 455678999999999999999999999985 456899999999


Q ss_pred             CCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcccc
Q 003786          555 NKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQS  634 (795)
Q Consensus       555 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~~  634 (795)
                      +|+|..++.... ...+++..+..++.||++||+|||+++   |+||||||+||||+.++.+||+|||+++....... .
T Consensus        95 ~g~l~~~~~~~~-~~~l~~~~~~~i~~~i~~gl~~LH~~~---ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~-~  169 (285)
T d1fmka3          95 KGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-T  169 (285)
T ss_dssp             TCBHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCTTC---------
T ss_pred             CCchhhhhhhcc-cccchHHHHHHHHHHHHHHHHHHhhhh---eecccccceEEEECCCCcEEEcccchhhhccCCCc-e
Confidence            999998885432 345899999999999999999999998   99999999999999999999999999987654332 2


Q ss_pred             cccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccccchh
Q 003786          635 KTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEA  714 (795)
Q Consensus       635 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~  714 (795)
                      ......||+.|+|||++..+.++.++|||||||++|||++|+.|+........ ......    ...         ..+.
T Consensus       170 ~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~-~~~~i~----~~~---------~~~~  235 (285)
T d1fmka3         170 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-VLDQVE----RGY---------RMPC  235 (285)
T ss_dssp             ------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-HHHHHH----TTC---------CCCC
T ss_pred             eeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHH-HHHHHH----hcC---------CCCC
Confidence            23346789999999999999999999999999999999997766544332221 121111    110         1112


Q ss_pred             hHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccccCCCCCCCCC
Q 003786          715 SYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKTINLPHPRQP  760 (795)
Q Consensus       715 ~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~~~l~~p~~p  760 (795)
                      +...+.++.++|.+||+.||++||++++|+++|+......+++.+|
T Consensus       236 ~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~~p~~~p  281 (285)
T d1fmka3         236 PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQP  281 (285)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCCCCCC
T ss_pred             CcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCCCCCCCC
Confidence            2233457889999999999999999999999998855544444333

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=1.5e-47  Score=414.12  Aligned_cols=253  Identities=24%  Similarity=0.315  Sum_probs=210.4

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      .++|++.+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.+|++++|||||++++++.+.+..++||||
T Consensus        25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~  104 (350)
T d1koaa2          25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF  104 (350)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            368999999999999999999864 6899999999876666677899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEEC--CCCCeeeeccccccccCCC
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLD--KDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~--~~~~vkL~DFGla~~~~~~  630 (795)
                      |++|+|.+++...  ...+++..+..++.||+.||.|||+++   ||||||||+|||++  .++.+||+|||+++.+...
T Consensus       105 ~~gg~L~~~l~~~--~~~l~e~~~~~i~~qi~~aL~ylH~~~---iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~  179 (350)
T d1koaa2         105 MSGGELFEKVADE--HNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK  179 (350)
T ss_dssp             CCSCBHHHHHTCT--TSCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTSCCEEECCCTTCEECCTT
T ss_pred             CCCCCHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhcC---CeeeeechhHeeeccCCCCeEEEeecchheecccc
Confidence            9999999888432  345899999999999999999999998   99999999999996  4688999999999876543


Q ss_pred             cccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccc
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL  710 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l  710 (795)
                      .   ......||+.|||||++.+..|+.++|||||||++|||++|+.||...+....  .......   .       ...
T Consensus       180 ~---~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~--~~~i~~~---~-------~~~  244 (350)
T d1koaa2         180 Q---SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET--LRNVKSC---D-------WNM  244 (350)
T ss_dssp             S---CEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHT---C-------CCS
T ss_pred             c---ccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHH--HHHHHhC---C-------CCC
Confidence            3   23446899999999999999999999999999999999999999975432221  1111100   0       001


Q ss_pred             cchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       711 ~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ........+..+.++|.+||+.||++|||++|+++|
T Consensus       245 ~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  280 (350)
T d1koaa2         245 DDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH  280 (350)
T ss_dssp             CCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHS
T ss_pred             CcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            111122234567899999999999999999999996

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.7e-48  Score=401.23  Aligned_cols=248  Identities=23%  Similarity=0.367  Sum_probs=197.4

Q ss_pred             CccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeee----cceeeEE
Q 003786          477 FSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIE----LEEKILI  549 (795)
Q Consensus       477 ~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv  549 (795)
                      |++.++||+|+||+||+|++. +++.||+|++....  ....+.+.+|+++|++++|||||++++++.+    ....++|
T Consensus        11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~iv   90 (270)
T d1t4ha_          11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV   90 (270)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEE
Confidence            367778999999999999875 58899999986542  3345678999999999999999999999875    3457899


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEEC-CCCCeeeeccccccccC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLD-KDMNPKISDFGMARIFG  628 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~-~~~~vkL~DFGla~~~~  628 (795)
                      |||+++|+|.+++..   ...+++..+..++.||++||+|||+++ .+|+||||||+||||+ +++.+||+|||+++...
T Consensus        91 mE~~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~gl~yLH~~~-~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~  166 (270)
T d1t4ha_          91 TELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR  166 (270)
T ss_dssp             EECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred             EeCCCCCcHHHHHhc---cccccHHHHHHHHHHHHHHHHHHHHCC-CCEEeCCcChhhceeeCCCCCEEEeecCcceecc
Confidence            999999999999843   345899999999999999999999875 4599999999999996 57999999999998654


Q ss_pred             CCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCc
Q 003786          629 GDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDP  708 (795)
Q Consensus       629 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~  708 (795)
                      ..    ......||+.|||||++.+ .|+.++|||||||++|||++|+.||........ +....    ..+....    
T Consensus       167 ~~----~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~-~~~~i----~~~~~~~----  232 (270)
T d1t4ha_         167 AS----FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ-IYRRV----TSGVKPA----  232 (270)
T ss_dssp             TT----SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH-HHHHH----TTTCCCG----
T ss_pred             CC----ccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHH-HHHHH----HcCCCCc----
Confidence            32    2345689999999999875 599999999999999999999999964432221 11111    1111000    


Q ss_pred             cccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          709 TLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       709 ~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                          ..+.....++.+++.+||+.||++|||++|+++|
T Consensus       233 ----~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~H  266 (270)
T d1t4ha_         233 ----SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH  266 (270)
T ss_dssp             ----GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             ----ccCccCCHHHHHHHHHHccCCHhHCcCHHHHhCC
Confidence                1111123457789999999999999999999874

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.3e-48  Score=412.31  Aligned_cols=256  Identities=28%  Similarity=0.434  Sum_probs=196.6

Q ss_pred             cCCccccccCcCCcccEEEeEecC-cc---eEEEEEeccc-CccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLN-GQ---EVAVKRLSSQ-SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~-~~---~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      ++|++.+.||+|+||.||+|++.. ++   .||||++... .....++|.+|+++|++++|||||++++++.+.+..++|
T Consensus        26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv  105 (299)
T d1jpaa_          26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMII  105 (299)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             hhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEE
Confidence            568888999999999999998643 32   5889988654 333456799999999999999999999999999999999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      ||||++|+|.+++..  ..+.+++..+..++.||++||.|||+++   |+||||||+||||+.++.+||+|||+++....
T Consensus       106 ~Ey~~~g~L~~~~~~--~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~  180 (299)
T d1jpaa_         106 TEFMENGSLDSFLRQ--NDGQFTVIQLVGMLRGIAAGMKYLADMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLED  180 (299)
T ss_dssp             EECCTTEEHHHHHHT--TTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred             EEecCCCcceeeecc--ccCCCCHHHHHHHHHHHHHHHHHHhhCC---CccCccccceEEECCCCcEEECCcccceEccC
Confidence            999999999998853  2345899999999999999999999988   99999999999999999999999999987654


Q ss_pred             Ccccc---cccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccc
Q 003786          630 DELQS---KTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWEL  705 (795)
Q Consensus       630 ~~~~~---~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  705 (795)
                      .....   ......||+.|||||.+.+..|+.++|||||||++|||++ |+.||.......  .....    ..+.    
T Consensus       181 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~--~~~~i----~~~~----  250 (299)
T d1jpaa_         181 DTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQD--VINAI----EQDY----  250 (299)
T ss_dssp             ---------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHHH----HTTC----
T ss_pred             CCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHH--HHHHH----HcCC----
Confidence            32221   1222457999999999999999999999999999999998 888886543221  11111    1110    


Q ss_pred             cCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          706 IDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       706 id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                           ....+...+..+.+++.+||+.||++|||+.||+++|+..
T Consensus       251 -----~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~  290 (299)
T d1jpaa_         251 -----RLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM  290 (299)
T ss_dssp             -----CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             -----CCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence                 1112223456788999999999999999999999998763

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=8.9e-48  Score=408.83  Aligned_cols=251  Identities=23%  Similarity=0.279  Sum_probs=191.0

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      +.|++.+.||+|+||+||+|++. +++.||||++.+.. ....+.+.+|+.+|++++|||||++++++.+++..++||||
T Consensus         9 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~   88 (307)
T d1a06a_           9 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQL   88 (307)
T ss_dssp             GTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             cceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence            56999999999999999999875 58999999997543 23345688999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEEC---CCCCeeeeccccccccCC
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLD---KDMNPKISDFGMARIFGG  629 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~---~~~~vkL~DFGla~~~~~  629 (795)
                      |++|+|.+++..   .+.+++..+..++.||+.||.|||+++   |+||||||+|||+.   +++.+||+|||+++....
T Consensus        89 ~~gg~L~~~l~~---~~~l~e~~~~~~~~qi~~al~ylH~~~---iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~  162 (307)
T d1a06a_          89 VSGGELFDRIVE---KGFYTERDASRLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP  162 (307)
T ss_dssp             CCSCBHHHHHHT---CSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCC--------
T ss_pred             cCCCcHHHhhhc---ccCCCHHHHHHHHHHHHHHHHhhhhce---eeeEEecccceeecccCCCceEEEeccceeEEccC
Confidence            999999999843   456999999999999999999999998   99999999999994   578999999999987643


Q ss_pred             CcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcc
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT  709 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~  709 (795)
                      ..   .....+||+.|||||++.+..|+.++|||||||++|||++|+.||........  ....   .....       .
T Consensus       163 ~~---~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~--~~~i---~~~~~-------~  227 (307)
T d1a06a_         163 GS---VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKL--FEQI---LKAEY-------E  227 (307)
T ss_dssp             -------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHH---HTTCC-------C
T ss_pred             CC---eeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHH--HHHH---hccCC-------C
Confidence            32   23346799999999999999999999999999999999999999975432221  1111   11110       0


Q ss_pred             ccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          710 LQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       710 l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      .........+..+.+++.+||+.||++|||++|++++
T Consensus       228 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  264 (307)
T d1a06a_         228 FDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQH  264 (307)
T ss_dssp             CCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             CCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence            1111122334578899999999999999999999996

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=3.4e-47  Score=411.72  Aligned_cols=253  Identities=22%  Similarity=0.274  Sum_probs=209.8

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      .++|++.++||+|+||.||+|+.. +|+.||||++........+.+.+|+++|++++|||||++++++.+++..++||||
T Consensus        28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~  107 (352)
T d1koba_          28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  107 (352)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            367999999999999999999864 6999999999776655667889999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEEC--CCCCeeeeccccccccCCC
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLD--KDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~--~~~~vkL~DFGla~~~~~~  630 (795)
                      |++|+|.+.+..  ....+++.++..++.||+.||.|||+++   |+||||||+||||+  .++.+||+|||+++.....
T Consensus       108 ~~gg~L~~~~~~--~~~~l~e~~~~~i~~qi~~aL~ylH~~~---iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~  182 (352)
T d1koba_         108 LSGGELFDRIAA--EDYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD  182 (352)
T ss_dssp             CCCCBHHHHTTC--TTCCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT
T ss_pred             CCCChHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccccccccccccCCCeEEEeecccceecCCC
Confidence            999999887633  2345899999999999999999999998   99999999999998  6789999999999987644


Q ss_pred             cccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccc
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL  710 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l  710 (795)
                      .   ......||+.|||||++.+..|+.++|||||||++|||++|+.||........  ......    .      +...
T Consensus       183 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~--~~~i~~----~------~~~~  247 (352)
T d1koba_         183 E---IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLET--LQNVKR----C------DWEF  247 (352)
T ss_dssp             S---CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH--HHHHHH----C------CCCC
T ss_pred             C---ceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHh----C------CCCC
Confidence            3   23446799999999999999999999999999999999999999975442221  111100    0      0001


Q ss_pred             cchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       711 ~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ........+..+.+||.+||+.||++|||+.|+++|
T Consensus       248 ~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~H  283 (352)
T d1koba_         248 DEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH  283 (352)
T ss_dssp             CSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             CcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            111122234567899999999999999999999986

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-47  Score=402.52  Aligned_cols=247  Identities=27%  Similarity=0.385  Sum_probs=197.1

Q ss_pred             cccCcCCcccEEEeEec---CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeecCCC
Q 003786          481 NKLGEGGFGPVYKGRLL---NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEYMPN  555 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~  555 (795)
                      ++||+|+||.||+|.+.   .++.||||++....  ....++|.+|+++|++++|||||+++++|.. +..++||||+++
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~   91 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL   91 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCC
Confidence            57999999999999754   35689999996542  2234679999999999999999999999854 567899999999


Q ss_pred             CChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc-cc
Q 003786          556 KSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL-QS  634 (795)
Q Consensus       556 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~-~~  634 (795)
                      |+|.+++..   ...+++..+..++.||++||.|||+++   |+||||||+||||+.++.+||+|||+++....... ..
T Consensus        92 g~L~~~l~~---~~~l~~~~~~~i~~qi~~gl~ylH~~~---iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~  165 (277)
T d1xbba_          92 GPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK  165 (277)
T ss_dssp             EEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEE
T ss_pred             CcHHHHHhh---ccCCCHHHHHHHHHHHHHHHhhHHhCC---cccCCCcchhhcccccCcccccchhhhhhccccccccc
Confidence            999999853   345899999999999999999999988   99999999999999999999999999987654332 22


Q ss_pred             cccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCccccch
Q 003786          635 KTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNE  713 (795)
Q Consensus       635 ~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~  713 (795)
                      ......||+.|||||.+.+..++.++|||||||++|||++ |+.||........  ...    ...+..         ..
T Consensus       166 ~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~--~~~----i~~~~~---------~~  230 (277)
T d1xbba_         166 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV--TAM----LEKGER---------MG  230 (277)
T ss_dssp             C----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH--HHH----HHTTCC---------CC
T ss_pred             cccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHH--HHH----HHcCCC---------CC
Confidence            3334578999999999999999999999999999999998 8999875442221  111    111111         11


Q ss_pred             hhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          714 ASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       714 ~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      .+...+..+.+|+.+||+.||++|||+++|+++|+.
T Consensus       231 ~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~  266 (277)
T d1xbba_         231 CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN  266 (277)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             CCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhC
Confidence            122334578899999999999999999999988865

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-47  Score=402.39  Aligned_cols=254  Identities=26%  Similarity=0.403  Sum_probs=205.3

Q ss_pred             cCCcccc-ccCcCCcccEEEeEec---CcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          475 ANFSTEN-KLGEGGFGPVYKGRLL---NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       475 ~~~~~~~-~LG~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      ++|.+.+ +||+|+||.||+|.+.   ++..||||++.... ....++|.+|+++|++++|||||++++++.. +..++|
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lv   86 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLV   86 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEE
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEE
Confidence            4566766 4999999999999753   35579999997543 3345789999999999999999999999864 568999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      ||||++|+|.+++..  ....+++..+..++.||++||+|||+++   |+||||||+||||+.++.+||+|||+++....
T Consensus        87 mE~~~~g~L~~~l~~--~~~~l~~~~~~~i~~qi~~gL~ylH~~~---iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~  161 (285)
T d1u59a_          87 MEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGA  161 (285)
T ss_dssp             EECCTTEEHHHHHTT--CTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEECTT
T ss_pred             EEeCCCCcHHHHhhc--cccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCcCchhheeeccCCceeeccchhhhcccc
Confidence            999999999998743  2346899999999999999999999988   99999999999999999999999999997754


Q ss_pred             Ccc-cccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccC
Q 003786          630 DEL-QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID  707 (795)
Q Consensus       630 ~~~-~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id  707 (795)
                      ... ........||+.|||||++....++.++|||||||++|||++ |+.||........  ...    ...+..     
T Consensus       162 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~--~~~----i~~~~~-----  230 (285)
T d1u59a_         162 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV--MAF----IEQGKR-----  230 (285)
T ss_dssp             CSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHH--HHH----HHTTCC-----
T ss_pred             cccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHH--HHH----HHcCCC-----
Confidence            332 222334578999999999999999999999999999999998 8999876543221  111    111111     


Q ss_pred             ccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          708 PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       708 ~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                          .+.+...+..+.+|+.+||+.||++|||+.+|++.|+.
T Consensus       231 ----~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~  268 (285)
T d1u59a_         231 ----MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRA  268 (285)
T ss_dssp             ----CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             ----CCCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence                11222344678899999999999999999999998865

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-47  Score=402.00  Aligned_cols=257  Identities=28%  Similarity=0.466  Sum_probs=199.4

Q ss_pred             cCCccccccCcCCcccEEEeEecCc-----ceEEEEEecccCc-cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeE
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLNG-----QEVAVKRLSSQSG-QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKIL  548 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~~-----~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  548 (795)
                      ..|++.+.||+|+||.||+|++...     ..||||++..... ....+|.+|+++|++++|||||++++++.+.+..++
T Consensus         7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~   86 (283)
T d1mqba_           7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI   86 (283)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEE
Confidence            5688899999999999999986532     4699999965432 334578999999999999999999999999999999


Q ss_pred             EeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccC
Q 003786          549 IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      ||||+.++++.+++...  ...+++..+..++.||+.||+|||+++   |+||||||+||||+.++.+||+|||+++...
T Consensus        87 v~e~~~~~~l~~~~~~~--~~~~~~~~~~~i~~~i~~gl~~lH~~~---iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~  161 (283)
T d1mqba_          87 ITEYMENGALDKFLREK--DGEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLE  161 (283)
T ss_dssp             EEECCTTEEHHHHHHHT--TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred             EEEecccCcchhhhhcc--cccccHHHHHHHHHHHHHhhhhccccc---cccCccccceEEECCCCeEEEcccchhhccc
Confidence            99999999998877433  345899999999999999999999988   9999999999999999999999999998764


Q ss_pred             CCccc-ccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccC
Q 003786          629 GDELQ-SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID  707 (795)
Q Consensus       629 ~~~~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id  707 (795)
                      ..... .......||+.|||||++.+..++.++|||||||++|||++|+.|+....... ......    ..+       
T Consensus       162 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~-~~~~~i----~~~-------  229 (283)
T d1mqba_         162 DDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH-EVMKAI----NDG-------  229 (283)
T ss_dssp             ------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-HHHHHH----HTT-------
T ss_pred             CCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHH-HHHHHH----hcc-------
Confidence            43221 22234568999999999999999999999999999999999766654332221 111111    111       


Q ss_pred             ccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          708 PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       708 ~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                        .....+...+..+.+|+.+||+.||++||||.||+++|+..
T Consensus       230 --~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l  270 (283)
T d1mqba_         230 --FRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL  270 (283)
T ss_dssp             --CCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             --CCCCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHH
Confidence              11112223446788999999999999999999999999763

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6e-47  Score=400.86  Aligned_cols=251  Identities=24%  Similarity=0.320  Sum_probs=207.2

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccC------ccchHHHHHHHHHHHhcCCcccceeeeeeeecceee
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS------GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKI  547 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  547 (795)
                      ++|++++.||+|+||+||+|++. +|+.||||++.+..      ....+.+.+|+++|++++|||||++++++.+.+..+
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~   89 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   89 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            67999999999999999999874 68999999986532      223578999999999999999999999999999999


Q ss_pred             EEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCC----Ceeeecccc
Q 003786          548 LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDM----NPKISDFGM  623 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~----~vkL~DFGl  623 (795)
                      +|||||++|+|.+++..   .+.+++..+..++.||+.||+|||+++   |+||||||+|||++.++    .+||+|||+
T Consensus        90 iv~E~~~gg~L~~~i~~---~~~l~~~~~~~~~~qi~~al~yLH~~~---ivHrDiKp~Nill~~~~~~~~~vkl~DfG~  163 (293)
T d1jksa_          90 LILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGL  163 (293)
T ss_dssp             EEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred             EEEEcCCCccccchhcc---ccccchhHHHHHHHHHHHHHHhhhhcc---eeecccccceEEEecCCCcccceEecchhh
Confidence            99999999999999854   346899999999999999999999998   99999999999998776    499999999


Q ss_pred             ccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccc
Q 003786          624 ARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAW  703 (795)
Q Consensus       624 a~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~  703 (795)
                      +.......   ......||+.|||||++.+..++.++|||||||++|||++|+.||...+....  ....    ...   
T Consensus       164 a~~~~~~~---~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~--~~~i----~~~---  231 (293)
T d1jksa_         164 AHKIDFGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET--LANV----SAV---  231 (293)
T ss_dssp             CEECTTSC---BCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHH----HTT---
T ss_pred             hhhcCCCc---cccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHH--HHHH----Hhc---
Confidence            98765332   23346799999999999999999999999999999999999999975432221  1111    000   


Q ss_pred             cccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          704 ELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       704 ~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                         ............+..+.++|.+||+.||++|||++|++++
T Consensus       232 ---~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  271 (293)
T d1jksa_         232 ---NYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH  271 (293)
T ss_dssp             ---CCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             ---CCCCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence               0111112222344577899999999999999999999985

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-46  Score=404.86  Aligned_cols=249  Identities=23%  Similarity=0.275  Sum_probs=207.8

Q ss_pred             ccCCccccccCcCCcccEEEeEe-cCcceEEEEEeccc---CccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEE
Q 003786          474 TANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQ---SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      .++|++++.||+|+||.||+|+. .+++.||||++.+.   .....+.+.+|+.+|++++|||||++++++.+.+..++|
T Consensus         4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv   83 (337)
T d1o6la_           4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV   83 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccc
Confidence            46799999999999999999986 46999999999754   234467789999999999999999999999999999999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      ||||++|+|..++..   ...+++..+..++.||+.||.|||+++   |+||||||+|||++.+|.+||+|||+++....
T Consensus        84 ~ey~~gg~L~~~~~~---~~~~~e~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~  157 (337)
T d1o6la_          84 MEYANGGELFFHLSR---ERVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGIS  157 (337)
T ss_dssp             EECCTTCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred             eeccCCCchhhhhhc---ccCCcHHHHHHHHHHHhhhhhhhhhcC---ccccccCHHHeEecCCCCEEEeeccccccccc
Confidence            999999999998843   445889999999999999999999998   99999999999999999999999999986543


Q ss_pred             CcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcc
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT  709 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~  709 (795)
                      ..  ......+||+.|||||++.+..|+.++|||||||++|||++|++||...+....  ......  ....        
T Consensus       158 ~~--~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~--~~~i~~--~~~~--------  223 (337)
T d1o6la_         158 DG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL--FELILM--EEIR--------  223 (337)
T ss_dssp             TT--CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHH--CCCC--------
T ss_pred             CC--cccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHH--HHHHhc--CCCC--------
Confidence            22  233457899999999999999999999999999999999999999976543222  111100  0001        


Q ss_pred             ccchhhHHHHHHHHHHHHhhccCCCCCCCC-----HHHHHHH
Q 003786          710 LQNEASYLILNRYINVGLLCVQEDAADRPT-----MFEVVSM  746 (795)
Q Consensus       710 l~~~~~~~~~~~l~~li~~cL~~dP~~RPt-----~~evl~~  746 (795)
                          .+...+..+.++|.+||+.||++||+     ++|+++|
T Consensus       224 ----~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~H  261 (337)
T d1o6la_         224 ----FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             ----CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             ----CCccCCHHHHHHHHhhccCCchhhcccccccHHHHHcC
Confidence                11123346788999999999999994     8899886

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.1e-47  Score=408.30  Aligned_cols=246  Identities=30%  Similarity=0.422  Sum_probs=201.2

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccCc---cchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSG---QGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      +.|+..++||+|+||+||+|+.. +++.||||++.....   ...+.+.+|+++|++++|||||++++++.+.+..++||
T Consensus        15 ~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~   94 (309)
T d1u5ra_          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM   94 (309)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             HhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEE
Confidence            35999999999999999999864 688999999976432   23356889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      |||++|+|+.++..   ...+++..+..++.||+.||.|||+++   |+||||||+||||+.++.+||+|||+++.... 
T Consensus        95 E~~~~g~l~~~~~~---~~~l~e~~~~~i~~qi~~aL~yLH~~~---iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~-  167 (309)
T d1u5ra_          95 EYCLGSASDLLEVH---KKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-  167 (309)
T ss_dssp             ECCSEEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTCBSSSS-
T ss_pred             EecCCCchHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEECCCCCEEEeecccccccCC-
Confidence            99999999876633   345899999999999999999999998   99999999999999999999999999986532 


Q ss_pred             ccccccccccccccccccccccc---CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccC
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQQ---GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID  707 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~~---~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id  707 (795)
                           .....||+.|||||++.+   +.|+.++|||||||++|||++|+.||........  ....   .... ......
T Consensus       168 -----~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~--~~~i---~~~~-~~~~~~  236 (309)
T d1u5ra_         168 -----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA--LYHI---AQNE-SPALQS  236 (309)
T ss_dssp             -----BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH--HHHH---HHSC-CCCCSC
T ss_pred             -----CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHH--HHHH---HhCC-CCCCCC
Confidence                 234679999999999864   4689999999999999999999999865432211  1111   1111 111111


Q ss_pred             ccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          708 PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       708 ~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                              ...+..+.+++.+||+.||++|||++|+++|
T Consensus       237 --------~~~s~~~~~li~~~L~~dP~~Rpt~~ell~H  267 (309)
T d1u5ra_         237 --------GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH  267 (309)
T ss_dssp             --------TTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred             --------CCCCHHHHHHHHHHCcCChhHCcCHHHHHhC
Confidence                    1223567899999999999999999999984

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=6.8e-47  Score=401.98  Aligned_cols=263  Identities=27%  Similarity=0.387  Sum_probs=211.2

Q ss_pred             HHHHccCCccccccCcCCcccEEEeEec------CcceEEEEEecccCcc-chHHHHHHHHHHHhcCCcccceeeeeeee
Q 003786          470 VSAATANFSTENKLGEGGFGPVYKGRLL------NGQEVAVKRLSSQSGQ-GQEEFKNEIKLIAKLQHRNLVRLLGCCIE  542 (795)
Q Consensus       470 i~~~~~~~~~~~~LG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~  542 (795)
                      +....++|++.++||+|+||+||+|+..      +++.||||++...... ..++|.+|+++|++++||||+++++++.+
T Consensus         8 ~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~   87 (301)
T d1lufa_           8 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV   87 (301)
T ss_dssp             TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred             ccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeecc
Confidence            3345678999999999999999999853      3578999999754333 35679999999999999999999999999


Q ss_pred             cceeeEEeecCCCCChhhhhhccC---------------------CcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEec
Q 003786          543 LEEKILIYEYMPNKSLDFFLFDST---------------------KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHR  601 (795)
Q Consensus       543 ~~~~~lv~E~~~~gsL~~~l~~~~---------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHr  601 (795)
                      .+..++||||+++|+|.+++....                     ....+++..+..++.||+.||+|||+++   ||||
T Consensus        88 ~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~---ivHr  164 (301)
T d1lufa_          88 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHR  164 (301)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCS
T ss_pred             CCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCC---eEee
Confidence            999999999999999999985422                     1234788899999999999999999998   9999


Q ss_pred             cCCCCcEEECCCCCeeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCC-CCC
Q 003786          602 DLKASNILLDKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKR-NTD  680 (795)
Q Consensus       602 Dikp~NIll~~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~-p~~  680 (795)
                      ||||+||||+.++.+||+|||+++...............||+.|||||.+.+..|+.++|||||||++|||++|.. |+.
T Consensus       165 DlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~  244 (301)
T d1lufa_         165 DLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYY  244 (301)
T ss_dssp             CCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred             EEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCC
Confidence            9999999999999999999999987654443444455678999999999999999999999999999999999964 554


Q ss_pred             CCCCcchhHhHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          681 FSNTNSLTLLGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       681 ~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                      ......  ....    ...+...         ..+...+.++.+|+.+||+.+|++||||.||+++|++.
T Consensus       245 ~~~~~e--~~~~----v~~~~~~---------~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i  299 (301)
T d1lufa_         245 GMAHEE--VIYY----VRDGNIL---------ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRM  299 (301)
T ss_dssp             TSCHHH--HHHH----HHTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             CCCHHH--HHHH----HHcCCCC---------CCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence            433222  1111    1111111         11222345788999999999999999999999999874

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3e-46  Score=398.71  Aligned_cols=245  Identities=26%  Similarity=0.321  Sum_probs=205.0

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEeccc---CccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQ---SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      ++|++++.||+|+||+||+|++. +|+.||||++.+.   .....+.+.+|+.+|++++|||||++++++.+.+..++||
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   83 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   83 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence            67999999999999999999874 5899999999653   2344678999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      |||++|+|..++..   ...+++..+..++.||+.||+|||+++   |+||||||+||||+.+|.+||+|||+++.....
T Consensus        84 E~~~gg~l~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~~~---iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~  157 (316)
T d1fota_          84 DYIEGGELFSLLRK---SQRFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPDV  157 (316)
T ss_dssp             CCCCSCBHHHHHHH---TSSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSCEECSSC
T ss_pred             eecCCccccccccc---cccccccHHHHHHHHHHHhhhhhccCc---EEccccCchheeEcCCCCEEEecCccceEeccc
Confidence            99999999988843   345788899999999999999999998   999999999999999999999999999876432


Q ss_pred             cccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccc
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL  710 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l  710 (795)
                           ....+||+.|||||++.+..|+.++|||||||++|||++|+.||...+....  ......  ....         
T Consensus       158 -----~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~--~~~i~~--~~~~---------  219 (316)
T d1fota_         158 -----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT--YEKILN--AELR---------  219 (316)
T ss_dssp             -----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH--HHHHHH--CCCC---------
T ss_pred             -----cccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHH--HHHHHc--CCCC---------
Confidence                 2346899999999999999999999999999999999999999975432221  111100  0000         


Q ss_pred             cchhhHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHH
Q 003786          711 QNEASYLILNRYINVGLLCVQEDAADRP-----TMFEVVSM  746 (795)
Q Consensus       711 ~~~~~~~~~~~l~~li~~cL~~dP~~RP-----t~~evl~~  746 (795)
                         .+...+..+.+++.+||+.||++||     |++|+++|
T Consensus       220 ---~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~H  257 (316)
T d1fota_         220 ---FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH  257 (316)
T ss_dssp             ---CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred             ---CCCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcC
Confidence               1112335677899999999999996     89999986

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-46  Score=400.73  Aligned_cols=254  Identities=26%  Similarity=0.429  Sum_probs=200.5

Q ss_pred             cCCccccccCcCCcccEEEeEec-Ccc----eEEEEEeccc-CccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeE
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQ----EVAVKRLSSQ-SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKIL  548 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  548 (795)
                      .+|+++++||+|+||+||+|++. +|+    +||+|++... .....+++.+|+++|++++|||||+++++|.++ ..++
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~   87 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   87 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeE
Confidence            56999999999999999999864 344    5888888653 344567899999999999999999999999764 5678


Q ss_pred             EeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccC
Q 003786          549 IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      ++||+.+++|.+++...  ...+++..+..++.||++||.|||+++   |+||||||+||||+.++.+||+|||+++...
T Consensus        88 v~e~~~~~~l~~~~~~~--~~~~~~~~~~~i~~qi~~gl~yLH~~~---iiHrDlKp~NIll~~~~~~kl~DFGla~~~~  162 (317)
T d1xkka_          88 ITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG  162 (317)
T ss_dssp             EEECCTTCBHHHHHHHT--SSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCCSHHHHTT
T ss_pred             EEEeccCCccccccccc--ccCCCHHHHHHHHHHHHHHHHHHHHcC---cccCcchhhcceeCCCCCeEeeccccceecc
Confidence            89999999998877543  456899999999999999999999988   9999999999999999999999999999876


Q ss_pred             CCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccC
Q 003786          629 GDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID  707 (795)
Q Consensus       629 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id  707 (795)
                      ............||+.|||||++.++.|+.++|||||||++|||+| |..|++........  ...    ..+.      
T Consensus       163 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~--~~i----~~~~------  230 (317)
T d1xkka_         163 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS--SIL----EKGE------  230 (317)
T ss_dssp             TTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHH--HHH----HHTC------
T ss_pred             cccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHH--HHH----HcCC------
Confidence            5444334444678999999999999999999999999999999998 78887654433221  111    1111      


Q ss_pred             ccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          708 PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       708 ~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                         ....+...+..+.+++.+||+.||++|||+.||+++|..
T Consensus       231 ---~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~  269 (317)
T d1xkka_         231 ---RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK  269 (317)
T ss_dssp             ---CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ---CCCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHH
Confidence               011122234577899999999999999999999999865

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.6e-46  Score=393.40  Aligned_cols=258  Identities=24%  Similarity=0.303  Sum_probs=197.6

Q ss_pred             cccccCcCCcccEEEeEec-CcceEEEEEecccCcc-----chHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          479 TENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQ-----GQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       479 ~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      .+++||+|+||+||+|++. +|+.||||++......     ..+.+.+|+.+|++++|||||++++++.+.+..++||||
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~   81 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF   81 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence            4578999999999999864 5899999998654221     235688999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      +.++++..++   .....+++..+..++.||++||+|||+++   |+||||||+|||++.++.+||+|||+++...... 
T Consensus        82 ~~~~~~~~~~---~~~~~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~-  154 (299)
T d1ua2a_          82 METDLEVIIK---DNSLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN-  154 (299)
T ss_dssp             CSEEHHHHHT---TCCSSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCC-
T ss_pred             hcchHHhhhh---hcccCCCHHHHHHHHHHHHHHHHHhhccc---eecccCCcceEEecCCCccccccCccccccCCCc-
Confidence            9998887665   33456899999999999999999999998   9999999999999999999999999998765432 


Q ss_pred             ccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhcc---Ccccc---cc
Q 003786          633 QSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWK---DDRAW---EL  705 (795)
Q Consensus       633 ~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~---~~~~~---~~  705 (795)
                       ......+||+.|||||++.. ..|+.++|||||||++|||++|..||......+.  +........   .....   ..
T Consensus       155 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~--l~~i~~~~~~~~~~~~~~~~~~  231 (299)
T d1ua2a_         155 -RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQ--LTRIFETLGTPTEEQWPDMCSL  231 (299)
T ss_dssp             -CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCCCCTTTSSSTTSS
T ss_pred             -ccccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHH--HHHHHHhcCCCChhhccchhcc
Confidence             22334679999999998865 5689999999999999999999999876543221  111111000   00000   00


Q ss_pred             ---cC-cccc----chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          706 ---ID-PTLQ----NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       706 ---id-~~l~----~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                         .. ....    ..........+.+++.+||+.||++|||++|+++|
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~H  280 (299)
T d1ua2a_         232 PDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM  280 (299)
T ss_dssp             TTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             chhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCC
Confidence               00 0000    01111234578899999999999999999999986

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-46  Score=396.27  Aligned_cols=259  Identities=28%  Similarity=0.392  Sum_probs=197.8

Q ss_pred             ccCCccccccCcCCcccEEEeEec------CcceEEEEEecccC-ccchHHHHHHHHHHHhc-CCcccceeeeeeeec-c
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL------NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIEL-E  544 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~-~  544 (795)
                      .++|++.++||+|+||.||+|++.      +++.||||++.... ....+.+.+|..++.++ +|+|||++++++.+. .
T Consensus        12 ~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~   91 (299)
T d1ywna1          12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG   91 (299)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred             HHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCC
Confidence            367999999999999999999753      35689999986543 23456678888888777 689999999987765 4


Q ss_pred             eeeEEeecCCCCChhhhhhccCC-------------cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEEC
Q 003786          545 EKILIYEYMPNKSLDFFLFDSTK-------------ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLD  611 (795)
Q Consensus       545 ~~~lv~E~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~  611 (795)
                      ..++|||||++|+|.+++.....             ...+++..+..++.||++||.|||+++   |+||||||+||||+
T Consensus        92 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~---ivHrDlKp~NILl~  168 (299)
T d1ywna1          92 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLS  168 (299)
T ss_dssp             CCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEC
T ss_pred             eEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCC---CcCCcCCccceeEC
Confidence            68999999999999999964332             345889999999999999999999998   99999999999999


Q ss_pred             CCCCeeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCC-CCCCCCCCcchhHh
Q 003786          612 KDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSK-RNTDFSNTNSLTLL  690 (795)
Q Consensus       612 ~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~-~p~~~~~~~~~~~~  690 (795)
                      .++.+||+|||+++...............||+.|||||++.+..++.++|||||||++|||++|. +|++....... +.
T Consensus       169 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~-~~  247 (299)
T d1ywna1         169 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-FC  247 (299)
T ss_dssp             GGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHH-HH
T ss_pred             CCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHH-HH
Confidence            99999999999998765544444445578999999999999999999999999999999999875 46654433221 11


Q ss_pred             HhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          691 GHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       691 ~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      ...    ..+...         ..+...+.++.+++.+||+.||++|||++||+++|+.
T Consensus       248 ~~~----~~~~~~---------~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~  293 (299)
T d1ywna1         248 RRL----KEGTRM---------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN  293 (299)
T ss_dssp             HHH----HHTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHH----hcCCCC---------CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            111    111111         1112234567899999999999999999999999976

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2e-45  Score=397.62  Aligned_cols=263  Identities=21%  Similarity=0.235  Sum_probs=214.4

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEeccc---CccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEe
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQ---SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIY  550 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  550 (795)
                      ++|+++++||+|+||.||+|++. +|+.||||++.+.   .....+.+.+|+++|+.++|||||++++++.+....++||
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~  120 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence            68999999999999999999874 6999999998653   2334567899999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGD  630 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~  630 (795)
                      ||+.+|+|..++..   .+.+++..+..++.||+.||.|||+++   ||||||||+||||+.++.+||+|||+++.....
T Consensus       121 e~~~~g~l~~~l~~---~~~l~e~~~~~i~~qi~~aL~yLH~~~---iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~  194 (350)
T d1rdqe_         121 EYVAGGEMFSHLRR---IGRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR  194 (350)
T ss_dssp             ECCTTCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred             ccccccchhhhHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCcCCHHHcccCCCCCEEeeeceeeeecccc
Confidence            99999999998843   345899999999999999999999998   999999999999999999999999999876532


Q ss_pred             cccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccc
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL  710 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l  710 (795)
                           .....||+.|||||++.+..|+.++|||||||++|||++|+.||...+...  .......  ....         
T Consensus       195 -----~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~--~~~~i~~--~~~~---------  256 (350)
T d1rdqe_         195 -----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYEKIVS--GKVR---------  256 (350)
T ss_dssp             -----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHH--CCCC---------
T ss_pred             -----cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHH--HHHHHhc--CCCC---------
Confidence                 234689999999999999999999999999999999999999997543211  1111110  0000         


Q ss_pred             cchhhHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHH--Hcc------ccCCCCCCCCCCccc
Q 003786          711 QNEASYLILNRYINVGLLCVQEDAADRP-----TMFEVVSM--LTN------KTINLPHPRQPAFSS  764 (795)
Q Consensus       711 ~~~~~~~~~~~l~~li~~cL~~dP~~RP-----t~~evl~~--L~~------~~~~l~~p~~p~~~~  764 (795)
                         .+...+..+.+++.+||+.||.+|+     |++|+++|  +.+      ....++.|..|.+..
T Consensus       257 ---~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~f~~~~~~~~~~~~~~~p~~p~~~~  320 (350)
T d1rdqe_         257 ---FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKG  320 (350)
T ss_dssp             ---CCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCS
T ss_pred             ---CCccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcCccccCCCHHHHHhcCCCcCccCCCCC
Confidence               1112345678999999999999994     99999985  222      123456677776543

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-46  Score=389.10  Aligned_cols=248  Identities=28%  Similarity=0.407  Sum_probs=196.8

Q ss_pred             cCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeec-ceeeEEeecC
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL-EEKILIYEYM  553 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lv~E~~  553 (795)
                      ++|++.++||+|+||.||+|++ .|.+||||+++..  ...+.+.+|+++|++++|||||++++++.+. +..++||||+
T Consensus         7 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~i~~~--~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~   83 (262)
T d1byga_           7 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM   83 (262)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred             HHeEEeEEEecCCCeEEEEEEE-CCeEEEEEEECcH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEecc
Confidence            5788999999999999999998 5788999999653  4457899999999999999999999998654 5689999999


Q ss_pred             CCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCccc
Q 003786          554 PNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDELQ  633 (795)
Q Consensus       554 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~~  633 (795)
                      ++|+|.+++... ....+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+++.....   
T Consensus        84 ~~g~L~~~l~~~-~~~~l~~~~~~~i~~~i~~al~ylH~~~---ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~---  156 (262)
T d1byga_          84 AKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST---  156 (262)
T ss_dssp             TTEEHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred             CCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHhhccccccCc---eeccccchHhheecCCCCEeecccccceecCCC---
Confidence            999999998543 2345899999999999999999999987   999999999999999999999999999865432   


Q ss_pred             ccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccCccccc
Q 003786          634 SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTLQN  712 (795)
Q Consensus       634 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l~~  712 (795)
                        .....+|+.|+|||++.+..++.++|||||||++|||++ |+.|+......+.  ....    ..+.         ..
T Consensus       157 --~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~--~~~i----~~~~---------~~  219 (262)
T d1byga_         157 --QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV--VPRV----EKGY---------KM  219 (262)
T ss_dssp             -------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGH--HHHH----TTTC---------CC
T ss_pred             --CccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHH--HHHH----HcCC---------CC
Confidence              233568899999999999999999999999999999998 6766655432222  1111    1111         11


Q ss_pred             hhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          713 EASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       713 ~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      +.+...+.++.+++.+||+.||++||||.||+++|+.
T Consensus       220 ~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~  256 (262)
T d1byga_         220 DAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEH  256 (262)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence            1222334577899999999999999999999999975

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=1.6e-45  Score=385.42  Aligned_cols=251  Identities=23%  Similarity=0.297  Sum_probs=204.7

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccCcc---------chHHHHHHHHHHHhcC-Ccccceeeeeeeec
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQ---------GQEEFKNEIKLIAKLQ-HRNLVRLLGCCIEL  543 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---------~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~  543 (795)
                      ++|++.+.||+|+||+||+|+.. +++.||||++.+....         ..+.+.+|+.+|++++ |||||++++++.+.
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~   82 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN   82 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence            68999999999999999999864 6899999999764321         1245789999999997 99999999999999


Q ss_pred             ceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccc
Q 003786          544 EEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGM  623 (795)
Q Consensus       544 ~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGl  623 (795)
                      +..++|||||++|+|.+++..   ...+++..+..++.||++||+|||+++   |+||||||+||||+.++.+||+|||+
T Consensus        83 ~~~~ivmE~~~~g~L~~~l~~---~~~l~e~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nill~~~~~~kl~DFG~  156 (277)
T d1phka_          83 TFFFLVFDLMKKGELFDYLTE---KVTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGF  156 (277)
T ss_dssp             SEEEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTT
T ss_pred             cceEEEEEcCCCchHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHcC---CcccccccceEEEcCCCCeEEccchh
Confidence            999999999999999999953   346899999999999999999999998   99999999999999999999999999


Q ss_pred             ccccCCCccccccccccccccccccccccc------CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhc
Q 003786          624 ARIFGGDELQSKTKRIVGTYGYMSPEYAQQ------GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLW  697 (795)
Q Consensus       624 a~~~~~~~~~~~~~~~~gt~~y~APE~~~~------~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~  697 (795)
                      ++......   ......||+.|+|||++.+      ..++.++||||+||++|||++|+.||........  ....   .
T Consensus       157 a~~~~~~~---~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~--~~~i---~  228 (277)
T d1phka_         157 SCQLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLM--LRMI---M  228 (277)
T ss_dssp             CEECCTTC---CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHH---H
T ss_pred             eeEccCCC---ceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHH--HHHH---H
Confidence            98765432   2334679999999998853      4578999999999999999999999975442221  1111   0


Q ss_pred             cCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          698 KDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       698 ~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ....  .     .........+.++.+++.+||+.||++|||++||+++
T Consensus       229 ~~~~--~-----~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h  270 (277)
T d1phka_         229 SGNY--Q-----FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH  270 (277)
T ss_dssp             HTCC--C-----CCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             hCCC--C-----CCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence            0000  0     0111122344578899999999999999999999875

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-45  Score=393.16  Aligned_cols=252  Identities=21%  Similarity=0.276  Sum_probs=206.9

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      .++|++.+.||+|+||+||+|++. +++.||||++.... .....+.+|+++|++++|||||++++++.+.+..++||||
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~   82 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEec
Confidence            478999999999999999999875 58899999997653 3346788999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCC--CCeeeeccccccccCCC
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKD--MNPKISDFGMARIFGGD  630 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~--~~vkL~DFGla~~~~~~  630 (795)
                      |++|+|.+++...  ...+++.++..++.||++||.|||+++   |+||||||+|||++.+  ..+||+|||+++.....
T Consensus        83 ~~gg~L~~~i~~~--~~~l~e~~~~~i~~qi~~al~yLH~~~---iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~  157 (321)
T d1tkia_          83 ISGLDIFERINTS--AFELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG  157 (321)
T ss_dssp             CCCCBHHHHHTSS--SCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT
T ss_pred             CCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHcC---CCcccccccceeecCCCceEEEEcccchhhccccC
Confidence            9999999998432  235899999999999999999999998   9999999999999854  58999999999876543


Q ss_pred             cccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccc
Q 003786          631 ELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL  710 (795)
Q Consensus       631 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l  710 (795)
                      .   ......+|+.|+|||.+.+..|+.++|||||||++|+|++|..||........  ....   ....       ..+
T Consensus       158 ~---~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~--~~~i---~~~~-------~~~  222 (321)
T d1tkia_         158 D---NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQI--IENI---MNAE-------YTF  222 (321)
T ss_dssp             C---EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH--HHHH---HHTC-------CCC
T ss_pred             C---cccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHH--HHHH---HhCC-------CCC
Confidence            3   23446789999999999999999999999999999999999999976442221  1111   0000       001


Q ss_pred             cchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       711 ~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ........+.++.+++.+||+.||++|||+.|+++|
T Consensus       223 ~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~h  258 (321)
T d1tkia_         223 DEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQH  258 (321)
T ss_dssp             CHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             ChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            111122234567899999999999999999999985

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.9e-46  Score=390.52  Aligned_cols=254  Identities=23%  Similarity=0.336  Sum_probs=194.9

Q ss_pred             ccCCccccccCcCCcccEEEeEecC----cceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeE
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLN----GQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKIL  548 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  548 (795)
                      .++|++.+.||+|+||.||+|++..    +..||||++.... ....+.+.+|+++|++++|||||++++++. .+..++
T Consensus         6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~i   84 (273)
T d1mp8a_           6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI   84 (273)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred             HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEE
Confidence            3679999999999999999998643    3468999886543 333567999999999999999999999985 567899


Q ss_pred             EeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccC
Q 003786          549 IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFG  628 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~  628 (795)
                      ||||+++|+|..++..  ....+++..+..++.||++||.|||+++   |+||||||+||+++.++.+||+|||+++...
T Consensus        85 v~E~~~~g~l~~~~~~--~~~~l~~~~~~~~~~qi~~gl~ylH~~~---iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~  159 (273)
T d1mp8a_          85 IMELCTLGELRSFLQV--RKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYME  159 (273)
T ss_dssp             EEECCTTEEHHHHHHH--TTTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC--------
T ss_pred             EEEeccCCcHHhhhhc--cCCCCCHHHHHHHHHHHHHHhhhhcccC---eeccccchhheeecCCCcEEEccchhheecc
Confidence            9999999999988743  3346899999999999999999999998   9999999999999999999999999998765


Q ss_pred             CCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccccC
Q 003786          629 GDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWELID  707 (795)
Q Consensus       629 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id  707 (795)
                      .... .......||+.|+|||++.+..|+.++|||||||++|||++ |.+|+........  ....    ..+...    
T Consensus       160 ~~~~-~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~--~~~i----~~~~~~----  228 (273)
T d1mp8a_         160 DSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV--IGRI----ENGERL----  228 (273)
T ss_dssp             ------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH--HHHH----HTTCCC----
T ss_pred             CCcc-eeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHH--HHHH----HcCCCC----
Confidence            4332 22344678999999999999999999999999999999998 7888876543322  1111    111110    


Q ss_pred             ccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          708 PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       708 ~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                           ..+...+..+.++|.+||+.||++|||+.||+++|+.
T Consensus       229 -----~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~  265 (273)
T d1mp8a_         229 -----PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST  265 (273)
T ss_dssp             -----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             -----CCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence                 1122334578899999999999999999999999865

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-46  Score=390.17  Aligned_cols=255  Identities=28%  Similarity=0.374  Sum_probs=195.9

Q ss_pred             cCCccccccCcCCcccEEEeEecC----cceEEEEEecccC---ccchHHHHHHHHHHHhcCCcccceeeeeeeecceee
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLN----GQEVAVKRLSSQS---GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKI  547 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~----~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  547 (795)
                      ++|++.+.||+|+||.||+|++..    ...||||++.+..   .+..++|.+|+.+|++++|||||++++++.+ ...+
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~   86 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMK   86 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchh
Confidence            679999999999999999997532    2368999986542   3334679999999999999999999999965 4678


Q ss_pred             EEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccccc
Q 003786          548 LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF  627 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~  627 (795)
                      +||||+++|++.+++...  .+.+++..+..++.||++||.|||+++   |+||||||+||||+.++.+||+|||+++..
T Consensus        87 lv~e~~~~~~l~~~~~~~--~~~l~~~~~~~~~~qi~~gl~ylH~~~---iiHrDikp~NIll~~~~~vkl~DfGl~~~~  161 (273)
T d1u46a_          87 MVTELAPLGSLLDRLRKH--QGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRAL  161 (273)
T ss_dssp             EEEECCTTCBHHHHHHHH--GGGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred             eeeeeecCcchhhhhhcc--cCCCCHHHHHHHHHHHHHHHHHhhhCC---EeeeeecHHHhccccccceeeccchhhhhc
Confidence            999999999998877543  345899999999999999999999988   999999999999999999999999999987


Q ss_pred             CCCccc-ccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhHhHhHhhhccCcccccc
Q 003786          628 GGDELQ-SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTLLGHAWDLWKDDRAWEL  705 (795)
Q Consensus       628 ~~~~~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  705 (795)
                      ...... .......|+..|+|||++.+..++.++|||||||++|||++ |+.||...+....  ...   .......   
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~--~~~---i~~~~~~---  233 (273)
T d1u46a_         162 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI--LHK---IDKEGER---  233 (273)
T ss_dssp             CC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH--HHH---HHTSCCC---
T ss_pred             ccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHH--HHH---HHhCCCC---
Confidence            544322 22334567889999999999999999999999999999998 8999865432221  111   1111111   


Q ss_pred             cCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          706 IDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       706 id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                            .+.+...+..+.+++.+||+.||++|||+.||++.|.+
T Consensus       234 ------~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~  271 (273)
T d1u46a_         234 ------LPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLE  271 (273)
T ss_dssp             ------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ------CCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence                  11122234568899999999999999999999999875

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2e-45  Score=386.04  Aligned_cols=258  Identities=24%  Similarity=0.317  Sum_probs=199.9

Q ss_pred             ccCCccccccCcCCcccEEEeEe-cCcceEEEEEecccCcc---chHHHHHHHHHHHhcCCcccceeeeeeeecce----
Q 003786          474 TANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQ---GQEEFKNEIKLIAKLQHRNLVRLLGCCIELEE----  545 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----  545 (795)
                      .++|++.+.||+|+||.||+|++ .+++.||||++.+....   ..+.+.+|+++|++++|||||++++++...+.    
T Consensus         6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~   85 (277)
T d1o6ya_           6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   85 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEE
T ss_pred             cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCce
Confidence            36799999999999999999986 46999999999764332   34578999999999999999999999887643    


Q ss_pred             eeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccc
Q 003786          546 KILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR  625 (795)
Q Consensus       546 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~  625 (795)
                      .++||||+++++|..++..   .+.+++.++..++.||++||.|||+++   |+||||||+|||++.++.++|+|||.+.
T Consensus        86 ~~lvmE~~~g~~L~~~~~~---~~~l~~~~~~~i~~qi~~al~~lH~~~---iiHrDiKP~NIll~~~~~~~l~d~~~~~  159 (277)
T d1o6ya_          86 PYIVMEYVDGVTLRDIVHT---EGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIAR  159 (277)
T ss_dssp             EEEEEECCCEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTSCEEECCCTTCE
T ss_pred             EEEEEECCCCCEehhhhcc---cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCccccCcccccCccccceeehhhhhh
Confidence            7899999999999988743   345899999999999999999999998   9999999999999999999999999987


Q ss_pred             ccCCCc-ccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCccccc
Q 003786          626 IFGGDE-LQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWE  704 (795)
Q Consensus       626 ~~~~~~-~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  704 (795)
                      ...... .........||+.|||||++.+..++.++|||||||++|||++|+.||......... .    ......... 
T Consensus       160 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~-~----~~~~~~~~~-  233 (277)
T d1o6ya_         160 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVA-Y----QHVREDPIP-  233 (277)
T ss_dssp             ECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH-H----HHHHCCCCC-
T ss_pred             hhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHH-H----HHHhcCCCC-
Confidence            653322 222344568999999999999999999999999999999999999999754322211 1    111111110 


Q ss_pred             ccCccccchhhHHHHHHHHHHHHhhccCCCCCCC-CHHHHHHHHcc
Q 003786          705 LIDPTLQNEASYLILNRYINVGLLCVQEDAADRP-TMFEVVSMLTN  749 (795)
Q Consensus       705 ~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RP-t~~evl~~L~~  749 (795)
                            ........+..+.+++.+||+.||++|| |++++++.|..
T Consensus       234 ------~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r  273 (277)
T d1o6ya_         234 ------PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR  273 (277)
T ss_dssp             ------GGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             ------CchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHH
Confidence                  0111122345788999999999999999 89999887754

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.1e-46  Score=393.60  Aligned_cols=259  Identities=28%  Similarity=0.391  Sum_probs=207.2

Q ss_pred             ccCCccccccCcCCcccEEEeEecC--------cceEEEEEecccCc-cchHHHHHHHHHHHhc-CCcccceeeeeeeec
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLLN--------GQEVAVKRLSSQSG-QGQEEFKNEIKLIAKL-QHRNLVRLLGCCIEL  543 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~  543 (795)
                      .++|++++.||+|+||.||+|+...        +..||||++++... ....++.+|+..+.++ +|||||+++++|.++
T Consensus        12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~   91 (299)
T d1fgka_          12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD   91 (299)
T ss_dssp             GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccC
Confidence            3689999999999999999997532        34799999976543 3457788999999888 799999999999999


Q ss_pred             ceeeEEeecCCCCChhhhhhccCC-------------cccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEE
Q 003786          544 EEKILIYEYMPNKSLDFFLFDSTK-------------ENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILL  610 (795)
Q Consensus       544 ~~~~lv~E~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll  610 (795)
                      ...++||||+++|+|.+++.....             ...+++..+..++.||++||+|||+++   ||||||||+|||+
T Consensus        92 ~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~---ivHrDiKp~NiLl  168 (299)
T d1fgka_          92 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLV  168 (299)
T ss_dssp             SSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEE
T ss_pred             CeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCC---EEeeeecccceee
Confidence            999999999999999999965432             245899999999999999999999998   9999999999999


Q ss_pred             CCCCCeeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCcchhH
Q 003786          611 DKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLS-SKRNTDFSNTNSLTL  689 (795)
Q Consensus       611 ~~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~  689 (795)
                      +.++.+||+|||+++...............||+.|+|||.+.++.|+.++|||||||++|||++ |.+|+.......  .
T Consensus       169 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~--~  246 (299)
T d1fgka_         169 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE--L  246 (299)
T ss_dssp             CTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--H
T ss_pred             cCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHH--H
Confidence            9999999999999997765544444556789999999999999999999999999999999998 677776443222  1


Q ss_pred             hHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          690 LGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       690 ~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                      .    ..+..+...         ..+...+.++.+++.+||+.||++|||+.||+++|++.
T Consensus       247 ~----~~i~~~~~~---------~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i  294 (299)
T d1fgka_         247 F----KLLKEGHRM---------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI  294 (299)
T ss_dssp             H----HHHHTTCCC---------CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             H----HHHHcCCCC---------CCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence            1    111111111         11122345688999999999999999999999999763

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-45  Score=389.65  Aligned_cols=264  Identities=24%  Similarity=0.324  Sum_probs=202.2

Q ss_pred             cCCccccccCcCCcccEEEeEe-cCcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          475 ANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      ++|+++++||+|+||+||+|++ .+++.||||++....  ....+.+.+|+++|++++|||||++++++.+....++|||
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e   81 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   81 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence            6899999999999999999986 468999999996543  2345789999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      |+.++.+.....  .....+++..+..++.||+.||+|||+++   ||||||||+|||++.++.+||+|||+++......
T Consensus        82 ~~~~~~~~~~~~--~~~~~l~e~~~~~~~~qil~~L~yLH~~~---IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~  156 (298)
T d1gz8a_          82 FLHQDLKKFMDA--SALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV  156 (298)
T ss_dssp             CCSEEHHHHHHH--TTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCS
T ss_pred             ecCCchhhhhhh--hcccCCCHHHHHHHHHHHHHHHHHhhcCC---EEccccCchheeecccCcceeccCCcceeccCCc
Confidence            998765554432  23455899999999999999999999998   9999999999999999999999999998765332


Q ss_pred             ccccccccccccccccccccccCC-CCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhcc-Cccccc-----
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQGL-FSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWK-DDRAWE-----  704 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~~~-~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~-----  704 (795)
                        .......||+.|+|||.+.... ++.++|||||||++|+|++|+.||...+...... ........ ....+.     
T Consensus       157 --~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~  233 (298)
T d1gz8a_         157 --RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFRTLGTPDEVVWPGVTSM  233 (298)
T ss_dssp             --BCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH-HHHHHHCCCCTTTSTTGGGS
T ss_pred             --ccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHH-HHHHhcCCCchhhccccccc
Confidence              2234467999999999877654 5899999999999999999999997654222111 10000000 000000     


Q ss_pred             -----ccCccccch---hhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          705 -----LIDPTLQNE---ASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       705 -----~id~~l~~~---~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                           .........   ........+.+++.+||+.||++|||++|++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H  283 (298)
T d1gz8a_         234 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH  283 (298)
T ss_dssp             TTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             cccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence                 000000000   111233577899999999999999999999997

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.9e-45  Score=399.94  Aligned_cols=250  Identities=26%  Similarity=0.313  Sum_probs=201.2

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC---ccchHHHHHH---HHHHHhcCCcccceeeeeeeeccee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS---GQGQEEFKNE---IKLIAKLQHRNLVRLLGCCIELEEK  546 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E---~~~l~~l~h~niv~l~~~~~~~~~~  546 (795)
                      .++|++.+.||+|+||.||+|++. +|+.||||++.+..   ......+.+|   +++++.++|||||++++++.+.+..
T Consensus         3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~   82 (364)
T d1omwa3           3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL   82 (364)
T ss_dssp             STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred             HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEE
Confidence            368999999999999999999875 58999999986432   2233344444   6667777899999999999999999


Q ss_pred             eEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          547 ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                      ++|||||++|+|.+++..   ...+++..+..++.||+.||.|||+++   ||||||||+||||+.+|.+||+|||+++.
T Consensus        83 ~ivmE~~~gg~L~~~l~~---~~~~~e~~~~~~~~qi~~aL~ylH~~~---iiHrDlKP~NILl~~~g~iKl~DFGla~~  156 (364)
T d1omwa3          83 SFILDLMNGGDLHYHLSQ---HGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACD  156 (364)
T ss_dssp             EEEECCCCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSSSCEEECCCTTCEE
T ss_pred             EEEEEecCCCcHHHHHHh---cccccHHHHHHHHHHHHHHHHHHHHCC---ccceeeccceeEEcCCCcEEEeeeceeee
Confidence            999999999999999853   345789999999999999999999998   99999999999999999999999999987


Q ss_pred             cCCCccccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccc
Q 003786          627 FGGDELQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWEL  705 (795)
Q Consensus       627 ~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  705 (795)
                      +....    .....||+.|||||++.. ..|+.++|||||||+||||++|+.||..........+...  . ....    
T Consensus       157 ~~~~~----~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~--~-~~~~----  225 (364)
T d1omwa3         157 FSKKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM--T-LTMA----  225 (364)
T ss_dssp             CSSSC----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHH--S-SSCC----
T ss_pred             cCCCc----ccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh--c-ccCC----
Confidence            65432    344679999999999865 5799999999999999999999999976554332211110  0 0000    


Q ss_pred             cCccccchhhHHHHHHHHHHHHhhccCCCCCCCC-----HHHHHHH
Q 003786          706 IDPTLQNEASYLILNRYINVGLLCVQEDAADRPT-----MFEVVSM  746 (795)
Q Consensus       706 id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt-----~~evl~~  746 (795)
                        .    ..+...+..+.++|.+||+.||++|||     ++|+++|
T Consensus       226 --~----~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~H  265 (364)
T d1omwa3         226 --V----ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES  265 (364)
T ss_dssp             --C----CCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTS
T ss_pred             --C----CCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcC
Confidence              0    011123456789999999999999999     6999875

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.7e-46  Score=396.05  Aligned_cols=259  Identities=27%  Similarity=0.372  Sum_probs=210.1

Q ss_pred             ccCCccccccCcCCcccEEEeEe------cCcceEEEEEecccCc-cchHHHHHHHHHHHhc-CCcccceeeeeeeecce
Q 003786          474 TANFSTENKLGEGGFGPVYKGRL------LNGQEVAVKRLSSQSG-QGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEE  545 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~  545 (795)
                      .++|+++++||+|+||.||+|++      .+++.||||+++.... ....++.+|+.+++++ +|||||++++++.+...
T Consensus        22 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~  101 (311)
T d1t46a_          22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP  101 (311)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCE
Confidence            36899999999999999999975      2467899999976433 3445789999999999 69999999999999999


Q ss_pred             eeEEeecCCCCChhhhhhccC---------------CcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEE
Q 003786          546 KILIYEYMPNKSLDFFLFDST---------------KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILL  610 (795)
Q Consensus       546 ~~lv~E~~~~gsL~~~l~~~~---------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll  610 (795)
                      .++|||||++|+|.+++....               ....+++..+..++.||++||+|||+++   |+||||||+|||+
T Consensus       102 ~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~---ivHrDLKp~NIl~  178 (311)
T d1t46a_         102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILL  178 (311)
T ss_dssp             CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEE
T ss_pred             EEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccccccccc
Confidence            999999999999999986533               2235889999999999999999999998   9999999999999


Q ss_pred             CCCCCeeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCC-CCCCCCcchhH
Q 003786          611 DKDMNPKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRN-TDFSNTNSLTL  689 (795)
Q Consensus       611 ~~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p-~~~~~~~~~~~  689 (795)
                      +.++.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++++.| +........ +
T Consensus       179 ~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~-~  257 (311)
T d1t46a_         179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-F  257 (311)
T ss_dssp             ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH-H
T ss_pred             cccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHH-H
Confidence            99999999999999987654444444557899999999999999999999999999999999995555 443332221 1


Q ss_pred             hHhHhhhccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          690 LGHAWDLWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       690 ~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      ....    ..+         .....+...+..+.+||.+||+.||++||||+||+++|++
T Consensus       258 ~~~i----~~~---------~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~  304 (311)
T d1t46a_         258 YKMI----KEG---------FRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK  304 (311)
T ss_dssp             HHHH----HHT---------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHH----hcC---------CCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            1111    111         1111112234578899999999999999999999999976

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.6e-45  Score=391.45  Aligned_cols=253  Identities=18%  Similarity=0.196  Sum_probs=201.3

Q ss_pred             ccCCcccc-ccCcCCcccEEEeEe-cCcceEEEEEecccCccchHHHHHHHHHHHhc-CCcccceeeeeeee----ccee
Q 003786          474 TANFSTEN-KLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIE----LEEK  546 (795)
Q Consensus       474 ~~~~~~~~-~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~----~~~~  546 (795)
                      .++|++.+ .||+|+||+||+|++ .+++.||||++..     ...+.+|++++.++ +|||||+++++|.+    ....
T Consensus        10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~   84 (335)
T d2ozaa1          10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL   84 (335)
T ss_dssp             GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             ccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEE
Confidence            46898875 599999999999986 4689999999853     35688999997655 89999999999875    4668


Q ss_pred             eEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECC---CCCeeeecccc
Q 003786          547 ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDK---DMNPKISDFGM  623 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~---~~~vkL~DFGl  623 (795)
                      ++|||||+||+|.+++... ....+++..+..++.||+.||+|||+++   |+||||||+|||++.   ++.+||+|||+
T Consensus        85 ~ivmEy~~gg~L~~~i~~~-~~~~l~e~~~~~i~~qi~~al~ylH~~~---iiHRDiKp~NIll~~~~~~~~~Kl~DFG~  160 (335)
T d2ozaa1          85 LIVMECLDGGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGF  160 (335)
T ss_dssp             EEEEECCCSEEHHHHHHSC-SCCCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred             EEEEECCCCCcHHHHHHhc-CCCCcCHHHHHHHHHHHHHHHHHHHHcC---Cccccccccccccccccccccccccccce
Confidence            9999999999999999542 2346899999999999999999999998   999999999999985   56799999999


Q ss_pred             ccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccc
Q 003786          624 ARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAW  703 (795)
Q Consensus       624 a~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~  703 (795)
                      ++......   ......||+.|||||++.+..|+.++|||||||++|+|++|+.||...........  .......    
T Consensus       161 a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~--~~~~i~~----  231 (335)
T d2ozaa1         161 AKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG--MKTRIRM----  231 (335)
T ss_dssp             CEECCCCC---CCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC----------CCCS----
T ss_pred             eeeccCCC---ccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHH--HHHHHhc----
Confidence            98765433   23446899999999999999999999999999999999999999975442221100  0000000    


Q ss_pred             cccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          704 ELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       704 ~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                        ....+........+.++.+++.+||+.||++|||+.|+++|
T Consensus       232 --~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  272 (335)
T d2ozaa1         232 --GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  272 (335)
T ss_dssp             --CSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             --CCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence              00111122334456788999999999999999999999985

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-45  Score=393.61  Aligned_cols=248  Identities=24%  Similarity=0.335  Sum_probs=203.6

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEeccc---CccchHHHHHHHHHHH-hcCCcccceeeeeeeecceeeEE
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQ---SGQGQEEFKNEIKLIA-KLQHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~-~l~h~niv~l~~~~~~~~~~~lv  549 (795)
                      ++|++++.||+|+||+||+|++. +++.||||++.+.   .....+.+..|..++. .++|||||++++++.+++..++|
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv   81 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   81 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence            67999999999999999999875 5899999999753   2344556777777765 68999999999999999999999


Q ss_pred             eecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCC
Q 003786          550 YEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGG  629 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~  629 (795)
                      ||||++|+|..++..   ...+++..+..++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+++....
T Consensus        82 mEy~~~g~L~~~i~~---~~~~~e~~~~~~~~qi~~al~ylH~~~---iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~  155 (320)
T d1xjda_          82 MEYLNGGDLMYHIQS---CHKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENML  155 (320)
T ss_dssp             EECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred             EeecCCCcHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCcccceeecCCCceeccccchhhhccc
Confidence            999999999999853   345889999999999999999999998   99999999999999999999999999986543


Q ss_pred             CcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCcc
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPT  709 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~  709 (795)
                      ..  .......||+.|+|||++.+..|+.++|||||||++|||++|+.||...+....  .....  ...        +.
T Consensus       156 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~--~~~i~--~~~--------~~  221 (320)
T d1xjda_         156 GD--AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL--FHSIR--MDN--------PF  221 (320)
T ss_dssp             TT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHH--HCC--------CC
T ss_pred             cc--ccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHH--HHHHH--cCC--------CC
Confidence            32  233446899999999999999999999999999999999999999976443221  11110  001        11


Q ss_pred             ccchhhHHHHHHHHHHHHhhccCCCCCCCCHH-HHHHH
Q 003786          710 LQNEASYLILNRYINVGLLCVQEDAADRPTMF-EVVSM  746 (795)
Q Consensus       710 l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~-evl~~  746 (795)
                          .+...+.++.+||.+||+.||++||++. |+++|
T Consensus       222 ----~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~h  255 (320)
T d1xjda_         222 ----YPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQH  255 (320)
T ss_dssp             ----CCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred             ----CCccCCHHHHHHHHHhcccCCCCCcCHHHHHHhC
Confidence                1112345678999999999999999996 78764

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-45  Score=390.52  Aligned_cols=258  Identities=26%  Similarity=0.409  Sum_probs=209.8

Q ss_pred             cCCccccccCcCCcccEEEeEec------CcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecceee
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL------NGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKI  547 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  547 (795)
                      ++|++.++||+|+||.||+|++.      +++.||||+++... ......|.+|++++++++|||||++++++...+..+
T Consensus        20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~   99 (308)
T d1p4oa_          20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL   99 (308)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCE
T ss_pred             HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCcee
Confidence            68899999999999999999753      35789999997543 233456899999999999999999999999999999


Q ss_pred             EEeecCCCCChhhhhhccC-------CcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeec
Q 003786          548 LIYEYMPNKSLDFFLFDST-------KENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISD  620 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~-------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~D  620 (795)
                      +||||+++|+|.+++....       ....+++..+..++.|+++||.|||+++   |+||||||+||||+.++.+||+|
T Consensus       100 lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~---ivHrDlk~~NiLld~~~~~Kl~D  176 (308)
T d1p4oa_         100 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGD  176 (308)
T ss_dssp             EEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEECTTCCEEECC
T ss_pred             EEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCC---eeeceEcCCceeecCCceEEEee
Confidence            9999999999999885432       2234688899999999999999999987   99999999999999999999999


Q ss_pred             cccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCC-CCCCCCCCcchhHhHhHhhhccC
Q 003786          621 FGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSK-RNTDFSNTNSLTLLGHAWDLWKD  699 (795)
Q Consensus       621 FGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~-~p~~~~~~~~~~~~~~~~~~~~~  699 (795)
                      ||+++...............||+.|+|||.+.+..++.++|||||||++|||++|. .|+.......  .....    ..
T Consensus       177 FGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~--~~~~i----~~  250 (308)
T d1p4oa_         177 FGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ--VLRFV----ME  250 (308)
T ss_dssp             TTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHH--HHHHH----HT
T ss_pred             cccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHH--HHHHH----Hh
Confidence            99998775544444445567999999999999999999999999999999999985 5554432211  11111    11


Q ss_pred             cccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHccc
Q 003786          700 DRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNK  750 (795)
Q Consensus       700 ~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~  750 (795)
                      +...         ..+...+..+.+++.+||+.+|++||||++|+++|+..
T Consensus       251 ~~~~---------~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~  292 (308)
T d1p4oa_         251 GGLL---------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE  292 (308)
T ss_dssp             TCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred             CCCC---------CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence            1111         11122345788999999999999999999999999874

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-45  Score=389.67  Aligned_cols=256  Identities=28%  Similarity=0.404  Sum_probs=202.9

Q ss_pred             cCCccccccCcCCcccEEEeEecC-cc--eEEEEEeccc-CccchHHHHHHHHHHHhc-CCcccceeeeeeeecceeeEE
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLN-GQ--EVAVKRLSSQ-SGQGQEEFKNEIKLIAKL-QHRNLVRLLGCCIELEEKILI  549 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~-~~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv  549 (795)
                      ++|++.++||+|+||.||+|++.+ +.  .||||++... .....+.+.+|+++|+++ +|||||++++++.+.+..++|
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV   89 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   89 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEE
Confidence            679999999999999999998754 43  4788887543 334567899999999999 799999999999999999999


Q ss_pred             eecCCCCChhhhhhcc-------------CCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCe
Q 003786          550 YEYMPNKSLDFFLFDS-------------TKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNP  616 (795)
Q Consensus       550 ~E~~~~gsL~~~l~~~-------------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~v  616 (795)
                      |||+++|+|.+++...             .....+++..+.+++.||++||.|||+++   |+||||||+|||++.++.+
T Consensus        90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~---iiHrDlkp~NIL~~~~~~~  166 (309)
T d1fvra_          90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVA  166 (309)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCE
T ss_pred             EEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCC---ccccccccceEEEcCCCce
Confidence            9999999999998643             23456899999999999999999999998   9999999999999999999


Q ss_pred             eeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCC-CCCCCCCcchhHhHhHhh
Q 003786          617 KISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKR-NTDFSNTNSLTLLGHAWD  695 (795)
Q Consensus       617 kL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~-p~~~~~~~~~~~~~~~~~  695 (795)
                      ||+|||+++......   ......||..|+|||.+.+..|+.++|||||||++|||++|.. |+...+..  .+....  
T Consensus       167 kl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~--~~~~~i--  239 (309)
T d1fvra_         167 KIADFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--ELYEKL--  239 (309)
T ss_dssp             EECCTTCEESSCEEC---CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHG--
T ss_pred             EEccccccccccccc---cccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHH--HHHHHH--
Confidence            999999998654222   2234568999999999999999999999999999999999765 55433221  112111  


Q ss_pred             hccCcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcccc
Q 003786          696 LWKDDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKT  751 (795)
Q Consensus       696 ~~~~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~  751 (795)
                        ..+..         ...+...+.++.++|.+||+.||++||||+||+++|+...
T Consensus       240 --~~~~~---------~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~  284 (309)
T d1fvra_         240 --PQGYR---------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML  284 (309)
T ss_dssp             --GGTCC---------CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             --HhcCC---------CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence              11110         1112223457889999999999999999999999987743

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.3e-44  Score=381.76  Aligned_cols=262  Identities=22%  Similarity=0.312  Sum_probs=203.6

Q ss_pred             cCCccccccCcCCcccEEEeEecCcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEeec
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYEY  552 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  552 (795)
                      ++|++.++||+|+||+||+|++++++.||||++....  ....+.+.+|+.+|++++|||||++++++.+.+..++++|+
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~   81 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence            6899999999999999999999889999999996542  33457899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      +.++.+..+.   ...+.+++..+..++.||++||+|||+++   ||||||||+|||++.++.+||+|||++........
T Consensus        82 ~~~~~~~~~~---~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~  155 (286)
T d1ob3a_          82 LDQDLKKLLD---VCEGGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVR  155 (286)
T ss_dssp             CSEEHHHHHH---TSTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---
T ss_pred             ehhhhHHHHH---hhcCCcchhhhHHHHHHHHHHHHHhccCc---EEecCCCCceeeEcCCCCEEecccccceecccCcc
Confidence            9988887776   33456999999999999999999999988   99999999999999999999999999987654332


Q ss_pred             ccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCc-----------
Q 003786          633 QSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDD-----------  700 (795)
Q Consensus       633 ~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~-----------  700 (795)
                        ......|++.|+|||.+.+ ..++.++|||||||++|||++|+.||...+..+.  ...........           
T Consensus       156 --~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~  231 (286)
T d1ob3a_         156 --KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ--LMRIFRILGTPNSKNWPNVTEL  231 (286)
T ss_dssp             --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHHHCCCCTTTSTTGGGS
T ss_pred             --ccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHH--HHHHHHhhCCCChhhccchhhh
Confidence              2334568999999998865 5679999999999999999999999975442221  11111100000           


Q ss_pred             -c---cccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          701 -R---AWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       701 -~---~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                       .   ......+.............+.+++.+||+.||++|||++|+++|
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~H  281 (286)
T d1ob3a_         232 PKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH  281 (286)
T ss_dssp             TTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             hhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence             0   000001110111122234577899999999999999999999874

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-44  Score=383.86  Aligned_cols=267  Identities=23%  Similarity=0.321  Sum_probs=199.2

Q ss_pred             cCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHH--HHHHHHHhcCCcccceeeeeeeecc----eeeE
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFK--NEIKLIAKLQHRNLVRLLGCCIELE----EKIL  548 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~--~E~~~l~~l~h~niv~l~~~~~~~~----~~~l  548 (795)
                      ++|.+.++||+|+||.||+|++ +|+.||||++....   .+++.  .|+..+.+++|||||++++++.+.+    ..++
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~---~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~l   78 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL   78 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEE
Confidence            4678889999999999999986 68899999996432   33343  4555556789999999999998764    5789


Q ss_pred             EeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhc-----CCCcEEeccCCCCcEEECCCCCeeeecccc
Q 003786          549 IYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY-----SRLRVIHRDLKASNILLDKDMNPKISDFGM  623 (795)
Q Consensus       549 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-----~~~~iiHrDikp~NIll~~~~~vkL~DFGl  623 (795)
                      |||||++|+|.+++..    ..+++..+..++.|++.||+|||+.     .+.+|+||||||+||||+.++.+||+|||+
T Consensus        79 v~Ey~~~g~L~~~l~~----~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl  154 (303)
T d1vjya_          79 VSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL  154 (303)
T ss_dssp             EEECCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred             EEecccCCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCc
Confidence            9999999999999954    2488999999999999999999974     124599999999999999999999999999


Q ss_pred             ccccCCCcc--cccccccccccccccccccccC------CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHh-
Q 003786          624 ARIFGGDEL--QSKTKRIVGTYGYMSPEYAQQG------LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAW-  694 (795)
Q Consensus       624 a~~~~~~~~--~~~~~~~~gt~~y~APE~~~~~------~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~-  694 (795)
                      ++.......  ........||+.|||||++.+.      .++.++|||||||+||||++|..|+............... 
T Consensus       155 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~  234 (303)
T d1vjya_         155 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS  234 (303)
T ss_dssp             CEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCS
T ss_pred             cccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccc
Confidence            987644322  1233456899999999998754      3678999999999999999999887543322211110000 


Q ss_pred             ----hhccCcccccccCccccch-hhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          695 ----DLWKDDRAWELIDPTLQNE-ASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       695 ----~~~~~~~~~~~id~~l~~~-~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                          .........+..+|.+... ........+.+++.+||+.||++|||+.||+++|+.
T Consensus       235 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~  294 (303)
T d1vjya_         235 DPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ  294 (303)
T ss_dssp             SCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHH
T ss_pred             cchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence                0000000111122222222 233456678899999999999999999999999875

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-44  Score=384.95  Aligned_cols=254  Identities=27%  Similarity=0.385  Sum_probs=199.9

Q ss_pred             cccccCcCCcccEEEeEecCc----ceEEEEEeccc-CccchHHHHHHHHHHHhcCCcccceeeeeeeec-ceeeEEeec
Q 003786          479 TENKLGEGGFGPVYKGRLLNG----QEVAVKRLSSQ-SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL-EEKILIYEY  552 (795)
Q Consensus       479 ~~~~LG~G~~g~Vy~~~~~~~----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lv~E~  552 (795)
                      +.++||+|+||+||+|++.++    ..||||++.+. .....++|.+|+++|++++|||||++++++.+. ...++||||
T Consensus        31 ~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~  110 (311)
T d1r0pa_          31 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY  110 (311)
T ss_dssp             EEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEEC
T ss_pred             cceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEE
Confidence            357899999999999986432    25899999753 334457899999999999999999999998764 578999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCcc
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDEL  632 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~~  632 (795)
                      |++++|.+++...  ...+++..+..++.|+++||.|||+.+   |+||||||+||||++++.+||+|||+++.......
T Consensus       111 ~~~g~l~~~~~~~--~~~~~~~~~~~i~~qia~gL~~lH~~~---iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~  185 (311)
T d1r0pa_         111 MKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF  185 (311)
T ss_dssp             CTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTC
T ss_pred             eecCchhhhhccc--cccchHHHHHHHHHHHHHhhhhhcccC---cccCCccHHhEeECCCCCEEEecccchhhcccccc
Confidence            9999999988543  344677889999999999999999998   99999999999999999999999999997654332


Q ss_pred             c--ccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccccccCccc
Q 003786          633 Q--SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWELIDPTL  710 (795)
Q Consensus       633 ~--~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~l  710 (795)
                      .  .......||+.|+|||.+....++.++||||||+++|||++|+.|+....... ......   . .+..  ..    
T Consensus       186 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~-~~~~~i---~-~g~~--~~----  254 (311)
T d1r0pa_         186 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-DITVYL---L-QGRR--LL----  254 (311)
T ss_dssp             CCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC-------CHHHH---H-TTCC--CC----
T ss_pred             ccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHH-HHHHHH---H-cCCC--CC----
Confidence            2  22233578999999999999999999999999999999999888875433211 111111   1 1110  01    


Q ss_pred             cchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcccc
Q 003786          711 QNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTNKT  751 (795)
Q Consensus       711 ~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~~~  751 (795)
                         .+...+..+.+++.+||+.||++||+|.||+++|+...
T Consensus       255 ---~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~  292 (311)
T d1r0pa_         255 ---QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF  292 (311)
T ss_dssp             ---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ---CcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence               11123456889999999999999999999999998753

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.1e-44  Score=379.80  Aligned_cols=263  Identities=27%  Similarity=0.384  Sum_probs=200.0

Q ss_pred             ccCCccccccCcCCcccEEEeEec-C-cceEEEEEecccC--ccchHHHHHHHHHHHhc---CCcccceeeeeeee----
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-N-GQEVAVKRLSSQS--GQGQEEFKNEIKLIAKL---QHRNLVRLLGCCIE----  542 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~-~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~----  542 (795)
                      .++|+++++||+|+||+||+|++. + ++.||||++....  ......+.+|+.+|+.|   +||||++++++|..    
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            478999999999999999999863 4 5679999986542  22344677888887776   79999999999863    


Q ss_pred             -cceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecc
Q 003786          543 -LEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDF  621 (795)
Q Consensus       543 -~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DF  621 (795)
                       ....+++|||+.++.+.....  .....+++..+..++.||+.||+|||+++   |+||||||+|||++.++.+||+||
T Consensus        86 ~~~~~~~~~e~~~~~~~~~~~~--~~~~~~~~~~~~~~~~qi~~aL~yLH~~~---ivHrDiKp~NILi~~~~~~kl~df  160 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLTTYLDK--VPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADF  160 (305)
T ss_dssp             SEEEEEEEEECCSCBHHHHHHH--SCTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECSC
T ss_pred             cCceEEEEEEeccCCchhhhhh--ccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EEecCCCccEEEEcCCCCeeecch
Confidence             356789999999988765542  33456889999999999999999999998   999999999999999999999999


Q ss_pred             ccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhh-----
Q 003786          622 GMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDL-----  696 (795)
Q Consensus       622 Gla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~-----  696 (795)
                      |+++.....   .......||+.|||||++.+..|+.++|||||||++|||++|+.||...+....  +......     
T Consensus       161 g~~~~~~~~---~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~--~~~i~~~~~~~~  235 (305)
T d1blxa_         161 GLARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ--LGKILDVIGLPG  235 (305)
T ss_dssp             CSCCCCCGG---GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHHHCCCC
T ss_pred             hhhhhhccc---ccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHH--HHHHHHhhCCCc
Confidence            999865332   234457899999999999999999999999999999999999999976542221  1111000     


Q ss_pred             ---ccCc-c----cccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          697 ---WKDD-R----AWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       697 ---~~~~-~----~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                         +... .    ....................+.+|+.+||+.||++|||++|+++|
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~H  293 (305)
T d1blxa_         236 EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  293 (305)
T ss_dssp             GGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence               0000 0    000000000111122234567789999999999999999999885

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.6e-45  Score=379.99  Aligned_cols=241  Identities=22%  Similarity=0.362  Sum_probs=196.0

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCcc------chHHHHHHHHHHHhcC--Ccccceeeeeeeecc
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQ------GQEEFKNEIKLIAKLQ--HRNLVRLLGCCIELE  544 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~  544 (795)
                      .++|++.+.||+|+||+||+|+.. +|+.||||++.+....      ...++.+|+.+|++++  |||||++++++.+.+
T Consensus         3 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~   82 (273)
T d1xwsa_           3 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD   82 (273)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred             CCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCC
Confidence            357999999999999999999864 6899999998654211      2245778999999997  899999999999999


Q ss_pred             eeeEEeecCCC-CChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCC-CCeeeeccc
Q 003786          545 EKILIYEYMPN-KSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKD-MNPKISDFG  622 (795)
Q Consensus       545 ~~~lv~E~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~-~~vkL~DFG  622 (795)
                      ..++||||+.+ +++.+++..   ...+++..+..++.||++||+|||+++   |+||||||+|||++.+ +.+||+|||
T Consensus        83 ~~~lv~e~~~~~~~l~~~~~~---~~~l~e~~~~~~~~qi~~al~~lH~~~---iiHrDiKp~NIll~~~~~~vkl~DFG  156 (273)
T d1xwsa_          83 SFVLILERPEPVQDLFDFITE---RGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG  156 (273)
T ss_dssp             EEEEEEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCT
T ss_pred             eEEEEEEeccCcchHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---CccccCcccceEEecCCCeEEECccc
Confidence            99999999986 567666633   346899999999999999999999998   9999999999999854 789999999


Q ss_pred             cccccCCCcccccccccccccccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcc
Q 003786          623 MARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLF-SIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDR  701 (795)
Q Consensus       623 la~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~-~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~  701 (795)
                      +++.....    ......||+.|||||++.+..+ +.++|||||||++|||++|+.||....    ...       ....
T Consensus       157 ~a~~~~~~----~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~----~i~-------~~~~  221 (273)
T d1xwsa_         157 SGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----EII-------RGQV  221 (273)
T ss_dssp             TCEECCSS----CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----HHH-------HCCC
T ss_pred             cceecccc----cccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch----HHh-------hccc
Confidence            99875433    2344689999999999987654 678999999999999999999986421    100       0000


Q ss_pred             cccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          702 AWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       702 ~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                         .+.+        ..+.++.+++.+||+.||++|||++|++++
T Consensus       222 ---~~~~--------~~s~~~~~li~~~L~~dp~~R~s~~eil~h  255 (273)
T d1xwsa_         222 ---FFRQ--------RVSSECQHLIRWCLALRPSDRPTFEEIQNH  255 (273)
T ss_dssp             ---CCSS--------CCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             ---CCCC--------CCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence               0111        123567889999999999999999999885

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-42  Score=376.78  Aligned_cols=262  Identities=21%  Similarity=0.248  Sum_probs=197.7

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCCcccceeeeeeeec------ceee
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL------EEKI  547 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~~  547 (795)
                      .+|+..++||+|+||+||+|++. +|+.||||++.+..    ..+.+|+++|++++|||||+++++|...      .+.+
T Consensus        20 ~~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~   95 (350)
T d1q5ka_          20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN   95 (350)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----SSCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEE
T ss_pred             CCcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccc----hHHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEE
Confidence            36888999999999999999975 58999999996542    2345799999999999999999998643      3468


Q ss_pred             EEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCC-Ceeeeccccccc
Q 003786          548 LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDM-NPKISDFGMARI  626 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~-~vkL~DFGla~~  626 (795)
                      +|||||+++.+..+.........+++..+..++.||++||+|||+++   |+||||||+|||++.++ .+||+|||+++.
T Consensus        96 lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~---IiHrDiKp~NILl~~~~~~~kl~DFG~a~~  172 (350)
T d1q5ka_          96 LVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ  172 (350)
T ss_dssp             EEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTTCCEEECCCTTCEE
T ss_pred             EEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcC---CcccCCCcceEEEecCCCceeEecccchhh
Confidence            99999998766555443344567899999999999999999999988   99999999999999875 899999999987


Q ss_pred             cCCCccccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhH-h--------Hhhh
Q 003786          627 FGGDELQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLG-H--------AWDL  696 (795)
Q Consensus       627 ~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~-~--------~~~~  696 (795)
                      .....   ......||+.|+|||.+.+ ..|+.++|||||||++|||++|+.||............ .        .+..
T Consensus       173 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~  249 (350)
T d1q5ka_         173 LVRGE---PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE  249 (350)
T ss_dssp             CCTTS---CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHH
T ss_pred             ccCCc---ccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhh
Confidence            65433   2234679999999998765 57999999999999999999999999765422211000 0        0000


Q ss_pred             cc----CcccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          697 WK----DDRAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       697 ~~----~~~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ..    .......................+.+|+.+||+.||++|||+.|+++|
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  303 (350)
T d1q5ka_         250 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH  303 (350)
T ss_dssp             HCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             hccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            00    000000000001111122334567899999999999999999999986

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.9e-42  Score=368.50  Aligned_cols=268  Identities=21%  Similarity=0.304  Sum_probs=198.4

Q ss_pred             ccCCccccccCcCCcccEEEeEe-cCcceEEEEEeccc--CccchHHHHHHHHHHHhcCCcccceeeeeeee--------
Q 003786          474 TANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQ--SGQGQEEFKNEIKLIAKLQHRNLVRLLGCCIE--------  542 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------  542 (795)
                      .++|+++++||+|+||+||+|++ .+|+.||||++...  .....+++.+|+++|++++||||+++++.+..        
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~   88 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   88 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence            47899999999999999999986 46999999998654  33345778999999999999999999998865        


Q ss_pred             cceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccc
Q 003786          543 LEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFG  622 (795)
Q Consensus       543 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFG  622 (795)
                      ....++||||+.++.+....   .....+++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||
T Consensus        89 ~~~~~iv~e~~~~~~~~~~~---~~~~~~~~~~~~~i~~qil~~l~~lH~~~---ivHrDlKp~NILl~~~~~~kl~dfg  162 (318)
T d3blha1          89 KGSIYLVFDFCEHDLAGLLS---NVLVKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFG  162 (318)
T ss_dssp             --CEEEEEECCCEEHHHHHT---CTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCT
T ss_pred             CceEEEEEeccCCCccchhh---hcccccccHHHHHHHHHHHHHHHHhccCC---EEecCcCchheeecCCCcEEeeecc
Confidence            34578999999988876554   33445888999999999999999999998   9999999999999999999999999


Q ss_pred             cccccCCCccc--ccccccccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhH-hHhHhhhcc
Q 003786          623 MARIFGGDELQ--SKTKRIVGTYGYMSPEYAQQG-LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTL-LGHAWDLWK  698 (795)
Q Consensus       623 la~~~~~~~~~--~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~-~~~~~~~~~  698 (795)
                      +++........  .......||+.|+|||++.+. .|+.++|||||||++|||++|+.||.......... .........
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~  242 (318)
T d3blha1         163 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT  242 (318)
T ss_dssp             TCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred             eeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence            99876533221  223345799999999988754 78999999999999999999999997544222111 111100000


Q ss_pred             Cc--------ccccccCcc--ccchhhH-----HHHHHHHHHHHhhccCCCCCCCCHHHHHHHH
Q 003786          699 DD--------RAWELIDPT--LQNEASY-----LILNRYINVGLLCVQEDAADRPTMFEVVSML  747 (795)
Q Consensus       699 ~~--------~~~~~id~~--l~~~~~~-----~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  747 (795)
                      ..        .....+...  .......     .....+.+|+.+||+.||++|||++|+++|-
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hp  306 (318)
T d3blha1         243 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHD  306 (318)
T ss_dssp             TTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred             hhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcCh
Confidence            00        011111000  0011111     1124567899999999999999999999974

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-42  Score=375.42  Aligned_cols=259  Identities=24%  Similarity=0.271  Sum_probs=193.0

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecc------
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELE------  544 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------  544 (795)
                      .++|+++++||+|+||+||+|++. +|+.||||++.+..  ....+.+.+|+++|++++|||||+++++|...+      
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~   96 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT   96 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccc
Confidence            468999999999999999999864 59999999997542  233467889999999999999999999998665      


Q ss_pred             eeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccc
Q 003786          545 EKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMA  624 (795)
Q Consensus       545 ~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla  624 (795)
                      +.++||||+ +.+|..++.    ...+++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||++
T Consensus        97 ~~~lv~e~~-~~~l~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~~---IiHrDiKp~NIL~~~~~~~kl~Dfg~a  168 (346)
T d1cm8a_          97 DFYLVMPFM-GTDLGKLMK----HEKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLA  168 (346)
T ss_dssp             CCEEEEECC-SEEHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             eEEEEEecc-cccHHHHHH----hccccHHHHHHHHHHHHHHHHHHHhCC---CcccccCcchhhcccccccccccccce
Confidence            469999999 556766653    345899999999999999999999998   999999999999999999999999999


Q ss_pred             cccCCCccccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHh-HhHh--------
Q 003786          625 RIFGGDELQSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLL-GHAW--------  694 (795)
Q Consensus       625 ~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~-~~~~--------  694 (795)
                      +.....     .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||...+....... ....        
T Consensus       169 ~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  243 (346)
T d1cm8a_         169 RQADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFV  243 (346)
T ss_dssp             EECCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred             eccCCc-----cccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHH
Confidence            876432     344679999999998876 5679999999999999999999999976542211100 0000        


Q ss_pred             hhccCc-------ccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          695 DLWKDD-------RAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       695 ~~~~~~-------~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ......       ...+. ...-...........+.+|+.+||+.||++|||++|+++|
T Consensus       244 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~H  301 (346)
T d1cm8a_         244 QRLQSDEAKNYMKGLPEL-EKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH  301 (346)
T ss_dssp             HTCSCHHHHHHHHHSCCC-CCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             hhhcchhhhhhhccCCcc-cccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence            000000       00000 0000011112233467789999999999999999999997

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-42  Score=372.91  Aligned_cols=264  Identities=21%  Similarity=0.237  Sum_probs=198.0

Q ss_pred             ccCCccccccCcCCcccEEEeEe-cCcceEEEEEecccC-ccchHHHHHHHHHHHhcCCcccceeeeeeeecc----eee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQS-GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELE----EKI  547 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~  547 (795)
                      +.+|+++++||+|+||+||+|+. .+|+.||||++.+.. ....+.+.+|+++|++++||||+++++++....    ..+
T Consensus         7 ~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~   86 (345)
T d1pmea_           7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV   86 (345)
T ss_dssp             CTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             CCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceE
Confidence            45799999999999999999986 479999999997543 233467889999999999999999999987654    335


Q ss_pred             EEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccccc
Q 003786          548 LIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIF  627 (795)
Q Consensus       548 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~  627 (795)
                      +++||+.+++|.+++..    ..+++..+..++.||++||+|||+++   ||||||||+||||+.++.+||+|||+++..
T Consensus        87 ~l~~~~~~g~L~~~l~~----~~l~~~~i~~i~~qil~al~yLH~~~---iiHRDIKp~NILl~~~~~~kl~DfG~a~~~  159 (345)
T d1pmea_          87 YLVTHLMGADLYKLLKT----QHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA  159 (345)
T ss_dssp             EEEEECCCEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEeecCCchhhhhhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCcceEEECCCCCEEEcccCceeec
Confidence            66677889999999843    35899999999999999999999998   999999999999999999999999999876


Q ss_pred             CCCcc-ccccccccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccc--
Q 003786          628 GGDEL-QSKTKRIVGTYGYMSPEYAQQ-GLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAW--  703 (795)
Q Consensus       628 ~~~~~-~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~--  703 (795)
                      ..... ........||+.|+|||++.. ..++.++||||+||++|||++|+.||.............  .........  
T Consensus       160 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~--~~~~~~~~~~~  237 (345)
T d1pmea_         160 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL--GILGSPSQEDL  237 (345)
T ss_dssp             CGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH--HHHCSCCHHHH
T ss_pred             cCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHh--hhccCCChhhh
Confidence            43322 122345679999999999854 578999999999999999999999997654322211100  000000000  


Q ss_pred             ---------c---ccCcccc---chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          704 ---------E---LIDPTLQ---NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       704 ---------~---~id~~l~---~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                               .   .+.....   .........++.+++.+||+.||++|||++|++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h  295 (345)
T d1pmea_         238 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  295 (345)
T ss_dssp             HTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                     0   0000000   01111223467899999999999999999999986

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-42  Score=368.28  Aligned_cols=271  Identities=23%  Similarity=0.286  Sum_probs=211.0

Q ss_pred             ccCCccccccCcCCcccEEEeEec----CcceEEEEEecccC----ccchHHHHHHHHHHHhcCC-cccceeeeeeeecc
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL----NGQEVAVKRLSSQS----GQGQEEFKNEIKLIAKLQH-RNLVRLLGCCIELE  544 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~----~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~  544 (795)
                      .++|+++++||+|+||+||+|+..    +|+.||||++.+..    ....+.+.+|+++|++++| |||+++++++.+..
T Consensus        23 l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~  102 (322)
T d1vzoa_          23 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET  102 (322)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred             hhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCC
Confidence            377999999999999999999752    47899999986532    2345678899999999976 89999999999999


Q ss_pred             eeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccc
Q 003786          545 EKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMA  624 (795)
Q Consensus       545 ~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla  624 (795)
                      ..++||||+.+++|..++...   ..+++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||++
T Consensus       103 ~~~~v~e~~~~~~L~~~i~~~---~~~~e~~~~~~~~Qi~~al~~lH~~~---ivHrDiKp~Nill~~~~~vkL~DFG~a  176 (322)
T d1vzoa_         103 KLHLILDYINGGELFTHLSQR---ERFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLS  176 (322)
T ss_dssp             EEEEEECCCCSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred             ceeeeeecccccHHHHHHHhc---ccccHHHHHHHHHHHHHHHHHhhcCC---EEeccCCccceeecCCCCEEEeeccch
Confidence            999999999999999998543   34678899999999999999999998   999999999999999999999999999


Q ss_pred             cccCCCcccccccccccccccccccccccC--CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCccc
Q 003786          625 RIFGGDELQSKTKRIVGTYGYMSPEYAQQG--LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRA  702 (795)
Q Consensus       625 ~~~~~~~~~~~~~~~~gt~~y~APE~~~~~--~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~  702 (795)
                      +.+..... .......|++.|+|||.+.+.  .++.++|||||||+||||++|+.||.....................  
T Consensus       177 ~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~~--  253 (322)
T d1vzoa_         177 KEFVADET-ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEP--  253 (322)
T ss_dssp             EECCGGGG-GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCC--
T ss_pred             hhhccccc-ccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccCCC--
Confidence            87654332 223446799999999988654  5788999999999999999999999765533322111111100000  


Q ss_pred             ccccCccccchhhHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHH--Hcc------ccCCCCCCCCCCcc
Q 003786          703 WELIDPTLQNEASYLILNRYINVGLLCVQEDAADRP-----TMFEVVSM--LTN------KTINLPHPRQPAFS  763 (795)
Q Consensus       703 ~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RP-----t~~evl~~--L~~------~~~~l~~p~~p~~~  763 (795)
                                ..+......+.+++.+||+.||++||     |++|+++|  +.+      ....+|+|..|.+.
T Consensus       254 ----------~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~i~~~~l~~~~~~~p~~p~~~  317 (322)
T d1vzoa_         254 ----------PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVPAPFKPVIR  317 (322)
T ss_dssp             ----------CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCC
T ss_pred             ----------CCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcCCCHHHHHhCCCCcCCCCCCC
Confidence                      11122346788899999999999999     58999875  222      23345666666554

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=1.6e-41  Score=365.33  Aligned_cols=257  Identities=21%  Similarity=0.316  Sum_probs=198.9

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcC-Ccccceeeeeeeec--ceeeEEe
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQ-HRNLVRLLGCCIEL--EEKILIY  550 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~--~~~~lv~  550 (795)
                      ++|+++++||+|+||+||+|+.. +++.||||++...   ..+++.+|+++|++++ ||||+++++++...  ...++||
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~  111 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  111 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH---HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEE
Confidence            68999999999999999999874 6899999998643   3567899999999995 99999999998744  5689999


Q ss_pred             ecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCC-CeeeeccccccccCC
Q 003786          551 EYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDM-NPKISDFGMARIFGG  629 (795)
Q Consensus       551 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~-~vkL~DFGla~~~~~  629 (795)
                      ||+++++|..+.      +.+++..+..++.||+.||.|||+++   |+||||||+|||++.++ .+||+|||+++....
T Consensus       112 e~~~~~~L~~~~------~~l~e~~i~~i~~qil~aL~~LH~~g---IvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~  182 (328)
T d3bqca1         112 EHVNNTDFKQLY------QTLTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP  182 (328)
T ss_dssp             ECCCSCBGGGTT------TSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCGGGCEECCT
T ss_pred             eecCCCcHHHHh------cCCCHHHHHHHHHHHHHHHHHHhhcc---cccccccccceEEcCCCCeeeecccccceeccC
Confidence            999999997654      34889999999999999999999998   99999999999998765 599999999987654


Q ss_pred             CcccccccccccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHh-----------hhc
Q 003786          630 DELQSKTKRIVGTYGYMSPEYAQQG-LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAW-----------DLW  697 (795)
Q Consensus       630 ~~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~-----------~~~  697 (795)
                      ..   ......+|+.|+|||.+.+. .++.++||||+||++|||++|+.||...............           ...
T Consensus       183 ~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~  259 (328)
T d3bqca1         183 GQ---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY  259 (328)
T ss_dssp             TC---CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHT
T ss_pred             CC---cccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhc
Confidence            32   23446789999999987764 5899999999999999999999998765432221111000           000


Q ss_pred             cCc---cccccc--------CccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          698 KDD---RAWELI--------DPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       698 ~~~---~~~~~i--------d~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                      ...   ......        ..............++.+|+.+||+.||++|||++|+++|
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~H  319 (328)
T d3bqca1         260 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH  319 (328)
T ss_dssp             TCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             ccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            000   000000        0011111222334567899999999999999999999985

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-41  Score=359.92  Aligned_cols=263  Identities=22%  Similarity=0.278  Sum_probs=204.2

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeecceeeEEee
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  551 (795)
                      ++|+++++||+|+||+||+|++. +++.||||+++...  ....+++.+|+.+|++++||||+++++++.+....++|+|
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~   81 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence            57999999999999999999864 68899999986543  2335788999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeeccccccccCCCc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMARIFGGDE  631 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~~~~~~  631 (795)
                      ++.+++|..++.   ..+.+++..+..++.|+++||+|||+++   |+||||||+|||++.++.+||+|||.++......
T Consensus        82 ~~~~~~l~~~~~---~~~~~~~~~~~~~~~q~~~aL~~lH~~~---IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~  155 (292)
T d1unla_          82 FCDQDLKKYFDS---CNGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIPV  155 (292)
T ss_dssp             CCSEEHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSCC
T ss_pred             eccccccccccc---cccccchhHHHHHHHHHHHHHHHhhcCC---EeeecccCcccccccCCceeeeecchhhcccCCC
Confidence            999999988774   3455789999999999999999999988   9999999999999999999999999998765433


Q ss_pred             ccccccccccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCc---cc-----
Q 003786          632 LQSKTKRIVGTYGYMSPEYAQQG-LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDD---RA-----  702 (795)
Q Consensus       632 ~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~---~~-----  702 (795)
                      .  ......+++.|+|||.+... .++.++|||||||++|||++|+.|+.......... ..........   ..     
T Consensus       156 ~--~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  232 (292)
T d1unla_         156 R--CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQL-KRIFRLLGTPTEEQWPSMTK  232 (292)
T ss_dssp             S--CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHH-HHHHHHHCCCCTTTCTTGGG
T ss_pred             c--cceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHH-HHHHhhcCCCChhhhhhhhh
Confidence            2  22334678899999988765 47999999999999999999999975433222211 1111111100   00     


Q ss_pred             ------ccccC-ccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          703 ------WELID-PTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       703 ------~~~id-~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                            ..... ..............+.+++.+||+.||++|||++|+++|
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~H  283 (292)
T d1unla_         233 LPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH  283 (292)
T ss_dssp             STTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             cccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                  00000 000111222334567889999999999999999999885

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2e-41  Score=359.64  Aligned_cols=259  Identities=19%  Similarity=0.213  Sum_probs=195.5

Q ss_pred             cCCccccccCcCCcccEEEeEe-cCcceEEEEEecccCccchHHHHHHHHHHHhcCCcccce-eeeeeeecceeeEEeec
Q 003786          475 ANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLVR-LLGCCIELEEKILIYEY  552 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~-l~~~~~~~~~~~lv~E~  552 (795)
                      ++|++.++||+|+||.||+|++ .+|+.||||++....  ..+++..|++++++++|+|++. +.+++.+.+..++||||
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~   84 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL   84 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT--TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc--cCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEE
Confidence            5799999999999999999986 458999999986543  3356889999999998777555 55566777888999999


Q ss_pred             CCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECC---CCCeeeeccccccccCC
Q 003786          553 MPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDK---DMNPKISDFGMARIFGG  629 (795)
Q Consensus       553 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~---~~~vkL~DFGla~~~~~  629 (795)
                      +.+ ++...+..  ....+++..+..++.|+++||+|||+++   |+||||||+|||++.   +..+||+|||+++.+..
T Consensus        85 ~~~-~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~  158 (299)
T d1ckia_          85 LGP-SLEDLFNF--CSRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD  158 (299)
T ss_dssp             CCC-BHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCSSCEECBC
T ss_pred             cCC-chhhhhhh--ccCCCcHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHhhccccccCCCceeeeeccCcceeccc
Confidence            955 55444432  2345899999999999999999999998   999999999999864   55799999999997654


Q ss_pred             Cccc-----ccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCccccc
Q 003786          630 DELQ-----SKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAWE  704 (795)
Q Consensus       630 ~~~~-----~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  704 (795)
                      ....     .......||+.|||||.+.+..++.++|||||||++|||++|+.||.................   .... 
T Consensus       159 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~---~~~~-  234 (299)
T d1ckia_         159 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISE---KKMS-  234 (299)
T ss_dssp             TTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHH---HHHH-
T ss_pred             cccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhc---ccCC-
Confidence            3221     223456899999999999999999999999999999999999999976543222111100000   0000 


Q ss_pred             ccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          705 LIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       705 ~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                        .  .........+.++.+++..||+.+|++||+++++.+.|+.
T Consensus       235 --~--~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~  275 (299)
T d1ckia_         235 --T--PIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRN  275 (299)
T ss_dssp             --S--CHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHH
T ss_pred             --C--ChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHH
Confidence              0  0011112234578899999999999999999998887765

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=4.4e-41  Score=355.39  Aligned_cols=259  Identities=17%  Similarity=0.198  Sum_probs=205.0

Q ss_pred             ccCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcCC-cccceeeeeeeecceeeEEee
Q 003786          474 TANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQH-RNLVRLLGCCIELEEKILIYE  551 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~E  551 (795)
                      .++|+++++||+|+||+||+|++. +|+.||||++...  .....+++|+++++.++| +|++.+++++.+....++|||
T Consensus         4 g~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~--~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme   81 (293)
T d1csna_           4 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR--SDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID   81 (293)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECC--TTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccc--cCcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEE
Confidence            468999999999999999999865 5899999998654  234568899999999975 899999999999999999999


Q ss_pred             cCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECC-----CCCeeeeccccccc
Q 003786          552 YMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDK-----DMNPKISDFGMARI  626 (795)
Q Consensus       552 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~-----~~~vkL~DFGla~~  626 (795)
                      |+ +++|.+++...  ...+++..+..++.|++.||+|||+++   |+||||||+|||++.     ++.+||+|||+++.
T Consensus        82 ~~-~~~l~~~~~~~--~~~~~~~~~~~i~~q~~~~l~~lH~~g---iiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~  155 (293)
T d1csna_          82 LL-GPSLEDLLDLC--GRKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF  155 (293)
T ss_dssp             CC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred             ec-CCCHHHHHHhh--ccchhhHHHHHHHHHHHHHHHHHHHCC---ceeccCCccceeecCcccccCCceEEcccceeEE
Confidence            98 68888887432  345889999999999999999999998   999999999999974     57899999999997


Q ss_pred             cCCCcc-----cccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhH-hHhHhhhccCc
Q 003786          627 FGGDEL-----QSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTL-LGHAWDLWKDD  700 (795)
Q Consensus       627 ~~~~~~-----~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~-~~~~~~~~~~~  700 (795)
                      +.....     ........||+.|||||.+.+..++.++|||||||++|||++|+.||.......... ...........
T Consensus       156 ~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~  235 (293)
T d1csna_         156 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQST  235 (293)
T ss_dssp             SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHS
T ss_pred             cccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCC
Confidence            643221     122345689999999999999999999999999999999999999997655332211 11110000000


Q ss_pred             ccccccCccccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHcc
Q 003786          701 RAWELIDPTLQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSMLTN  749 (795)
Q Consensus       701 ~~~~~id~~l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L~~  749 (795)
                      ..         .+.....+.++.+++..|++.+|++||+++.+.+.|..
T Consensus       236 ~~---------~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~  275 (293)
T d1csna_         236 PL---------RELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSK  275 (293)
T ss_dssp             CH---------HHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHH
T ss_pred             Ch---------HHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHH
Confidence            00         11112234568889999999999999999998887765

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.2e-41  Score=364.35  Aligned_cols=260  Identities=22%  Similarity=0.214  Sum_probs=192.6

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeee------cce
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIE------LEE  545 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~  545 (795)
                      ++|+++++||+|+||+||+|++. +|+.||||++.+..  .....++.+|+.+|++++|||||+++++|..      ..+
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~   96 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD   96 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence            68999999999999999999875 59999999996543  2334568899999999999999999999864      367


Q ss_pred             eeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccc
Q 003786          546 KILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR  625 (795)
Q Consensus       546 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~  625 (795)
                      .++||||+.++.+..+.      ..+++..+..++.||+.||.|||+++   |+||||||+|||++.++.+|++|||+++
T Consensus        97 ~~iv~Ey~~~~l~~~~~------~~~~~~~i~~~~~qil~gl~~LH~~g---iiHrDlKP~Nil~~~~~~~kl~df~~~~  167 (355)
T d2b1pa1          97 VYLVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR  167 (355)
T ss_dssp             EEEEEECCSEEHHHHHT------SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred             eEEEEeccchHHHHhhh------cCCCHHHHHHHHHHHHHHHHHhhhcc---cccccCCccccccccccceeeechhhhh
Confidence            89999999877665442      34789999999999999999999998   9999999999999999999999999988


Q ss_pred             ccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHh--H----hhhc--
Q 003786          626 IFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGH--A----WDLW--  697 (795)
Q Consensus       626 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~--~----~~~~--  697 (795)
                      ......   ......||+.|+|||++.+..++.++||||+||+++||++|+.||...+.........  .    ...+  
T Consensus       168 ~~~~~~---~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~  244 (355)
T d2b1pa1         168 TAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK  244 (355)
T ss_dssp             ----------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTT
T ss_pred             cccccc---ccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHH
Confidence            654332   2344679999999999999999999999999999999999999987544221100000  0    0000  


Q ss_pred             ---------cC------cccccccCcc---ccchhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          698 ---------KD------DRAWELIDPT---LQNEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       698 ---------~~------~~~~~~id~~---l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                               ..      ..........   ............+.+|+.+||+.||++|||++|+++|
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H  311 (355)
T d2b1pa1         245 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  311 (355)
T ss_dssp             SCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hhhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence                     00      0000011111   1122334566788999999999999999999999986

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.5e-41  Score=363.14  Aligned_cols=261  Identities=21%  Similarity=0.244  Sum_probs=196.3

Q ss_pred             ccCCccccccCcCCcccEEEeEe-cCcceEEEEEecccC--ccchHHHHHHHHHHHhcCCcccceeeeeeeec-----ce
Q 003786          474 TANFSTENKLGEGGFGPVYKGRL-LNGQEVAVKRLSSQS--GQGQEEFKNEIKLIAKLQHRNLVRLLGCCIEL-----EE  545 (795)
Q Consensus       474 ~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~  545 (795)
                      .++|++.++||+|+||+||+|++ .+|+.||||++.+..  ....+++.+|+++|++++|||||++++++...     ..
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence            57899999999999999999986 469999999997543  23345788999999999999999999998643     34


Q ss_pred             eeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeeeecccccc
Q 003786          546 KILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKISDFGMAR  625 (795)
Q Consensus       546 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL~DFGla~  625 (795)
                      .++++||+.+|+|.+++..    +.+++..+..++.||+.||+|||+++   |+||||||+|||++.++.+|++|||++.
T Consensus        97 ~~~i~~~~~gg~L~~~~~~----~~l~e~~~~~i~~qil~aL~~LH~~g---iiHrDiKp~NILi~~~~~~kl~dfg~a~  169 (348)
T d2gfsa1          97 DVYLVTHLMGADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR  169 (348)
T ss_dssp             CCEEEEECCSEEHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCC----
T ss_pred             eEEEEEeecCCchhhhccc----ccccHHHHHHHHHHHHHHHHHHHhCC---CcccccCCccccccccccccccccchhc
Confidence            5777888899999998832    34899999999999999999999998   9999999999999999999999999997


Q ss_pred             ccCCCcccccccccccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCcchhHhHhHhhhccCcccc-
Q 003786          626 IFGGDELQSKTKRIVGTYGYMSPEYAQQG-LFSIKSDVFSFGVLLLETLSSKRNTDFSNTNSLTLLGHAWDLWKDDRAW-  703 (795)
Q Consensus       626 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~-  703 (795)
                      ...     .......||+.|+|||.+.+. .++.++|||||||++|+|++|+.||...+.................... 
T Consensus       170 ~~~-----~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~  244 (348)
T d2gfsa1         170 HTD-----DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLK  244 (348)
T ss_dssp             CCT-----GGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHT
T ss_pred             ccC-----cccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhh
Confidence            643     223446799999999986664 5789999999999999999999999765422221111000000000000 


Q ss_pred             --------cccC--ccc-c---chhhHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 003786          704 --------ELID--PTL-Q---NEASYLILNRYINVGLLCVQEDAADRPTMFEVVSM  746 (795)
Q Consensus       704 --------~~id--~~l-~---~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  746 (795)
                              ....  +.. .   ..........+.+||.+||+.||++|||++|+++|
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~H  301 (348)
T d2gfsa1         245 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  301 (348)
T ss_dssp             TCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             hccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcC
Confidence                    0000  000 0   00011234567899999999999999999999986

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.8e-36  Score=330.20  Aligned_cols=263  Identities=20%  Similarity=0.198  Sum_probs=193.1

Q ss_pred             cCCccccccCcCCcccEEEeEec-CcceEEEEEecccCccchHHHHHHHHHHHhcC-----------Ccccceeeeeeee
Q 003786          475 ANFSTENKLGEGGFGPVYKGRLL-NGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQ-----------HRNLVRLLGCCIE  542 (795)
Q Consensus       475 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~~~  542 (795)
                      .+|+++++||+|+||+||+|+.. +|+.||||++.+.. ...+.+.+|+++|++++           |+||+++++++..
T Consensus        13 ~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~   91 (362)
T d1q8ya_          13 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH   91 (362)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred             CcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeee
Confidence            45999999999999999999864 69999999997542 23467788999998885           4789999988765


Q ss_pred             c--ceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHh-cCCCcEEeccCCCCcEEECCCCC----
Q 003786          543 L--EEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQ-YSRLRVIHRDLKASNILLDKDMN----  615 (795)
Q Consensus       543 ~--~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~iiHrDikp~NIll~~~~~----  615 (795)
                      .  ...+++++++..+..............+++..+..++.||++||+|||+ .+   |+||||||+||||+.++.    
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~---IvHrDlKp~NIll~~~~~~~~~  168 (362)
T d1q8ya_          92 KGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEIVDSPENL  168 (362)
T ss_dssp             EETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEEEEETTTTE
T ss_pred             ccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcC---cccccCChhHeeeeccCccccc
Confidence            4  4566777777665544444344455668889999999999999999998 66   999999999999987654    


Q ss_pred             --eeeeccccccccCCCcccccccccccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCcc----hhH
Q 003786          616 --PKISDFGMARIFGGDELQSKTKRIVGTYGYMSPEYAQQGLFSIKSDVFSFGVLLLETLSSKRNTDFSNTNS----LTL  689 (795)
Q Consensus       616 --vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~----~~~  689 (795)
                        +||+|||.+.....     ......||+.|+|||++....++.++||||+||++++|++|+.||.......    ...
T Consensus       169 ~~~kl~dfg~s~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~  243 (362)
T d1q8ya_         169 IQIKIADLGNACWYDE-----HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDH  243 (362)
T ss_dssp             EEEEECCCTTCEETTB-----CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHH
T ss_pred             ceeeEeeccccccccc-----ccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHH
Confidence              99999999986532     2234679999999999999999999999999999999999999986543211    100


Q ss_pred             -hHhHhhh-----------------ccCcccccccCcc----------ccchhhHHHHHHHHHHHHhhccCCCCCCCCHH
Q 003786          690 -LGHAWDL-----------------WKDDRAWELIDPT----------LQNEASYLILNRYINVGLLCVQEDAADRPTMF  741 (795)
Q Consensus       690 -~~~~~~~-----------------~~~~~~~~~id~~----------l~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~  741 (795)
                       ......+                 +........+...          ............+.+|+.+||+.||++|||++
T Consensus       244 ~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~  323 (362)
T d1q8ya_         244 IAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAG  323 (362)
T ss_dssp             HHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHH
T ss_pred             HHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHH
Confidence             0000000                 0000000000000          01112345677889999999999999999999


Q ss_pred             HHHHH
Q 003786          742 EVVSM  746 (795)
Q Consensus       742 evl~~  746 (795)
                      |+|+|
T Consensus       324 e~L~H  328 (362)
T d1q8ya_         324 GLVNH  328 (362)
T ss_dssp             HHHTC
T ss_pred             HHhcC
Confidence            99986

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

Probab=99.88  E-value=4.8e-23  Score=182.46  Aligned_cols=112  Identities=23%  Similarity=0.433  Sum_probs=97.5

Q ss_pred             cccCCCCCccCCCCeEEeCCCeEEEEEeCCCCCCceEEEEEeccCCCeEEEecCCCCCCccCcceEEEeeCCceEEeCCC
Q 003786           25 ADNITPSRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPDTIVWVANRNSPIFDSNAVLTISNGGKLVLLNQT  104 (795)
Q Consensus        25 ~~~l~~~~~l~~~~~l~s~~g~f~lgf~~~~~~~~~~~~iw~~~~~~t~vW~an~~~p~~~~~~~l~~~~~g~lvl~~~~  104 (795)
                      +|||.|||.|.+|++|+|  |.|.|+|+.+|+     +.++..   .++||.||++.|  ...+.|.|+.||+|||+|+ 
T Consensus         1 tDtL~~gq~L~~g~~l~~--g~~~l~~q~DGN-----Lvly~~---~~~vW~s~~~~~--~~~~~l~l~~dGnLvl~~~-   67 (112)
T d1xd5a_           1 SDRLNSGHQLDTGGSLAE--GGYLFIIQNDCN-----LVLYDN---NRAVWASGTNGK--ASGCVLKMQNDGNLVIYSG-   67 (112)
T ss_dssp             CCEEETTEEECTTCEEEE--TTEEEEECTTSC-----EEEEET---TEEEEECCCTTS--CSSEEEEECTTSCEEEEET-
T ss_pred             CCEecCCCEecCCCEEEE--CCEEEEEcCCCC-----EEEEcC---CcEEEEccCccC--CCCcEEEEeccccEEEEec-
Confidence            589999999999999986  999999999997     666654   499999999988  4457899999999999996 


Q ss_pred             CceEEeecCCCCccccEEEEccCCCeEEeecCCCCCcccceecccCCCch
Q 003786          105 NGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQSFDHPSD  154 (795)
Q Consensus       105 ~~~~Wst~~~~~~~~~~a~l~d~GNlvl~~~~~~~~~~~~~WqSFd~PTD  154 (795)
                      +.++|++++.+......|+|+|+|||||++     ..+.++|||+.+|+|
T Consensus        68 ~~~~w~s~t~~~~~~~~l~L~ddGNlvly~-----~~~~~~W~S~t~~~n  112 (112)
T d1xd5a_          68 SRAIWASNTNRQNGNYYLILQRDRNVVIYD-----NSNNAIWATHTNVGN  112 (112)
T ss_dssp             TEEEEECCCCCSCCCCEEEECTTSCEEEEC-----TTSCEEEECCCCCCC
T ss_pred             CCeEEEEeeccCCCceEEEEcCCCCEEEEC-----CCCcEEecCCCccCC
Confidence            577888888776667789999999999998     456789999999975

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Snowdrop (Galanthus nivalis) [TaxId: 4670]

Probab=99.88  E-value=1e-22  Score=178.57  Aligned_cols=107  Identities=23%  Similarity=0.363  Sum_probs=95.0

Q ss_pred             cccCCCCCccCCCCeEEeCCCeEEEEEeCCCCCCceEEEEEeccCCCeEEEecCCCCCCccCcceEEEeeCCceEEeCCC
Q 003786           25 ADNITPSRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPDTIVWVANRNSPIFDSNAVLTISNGGKLVLLNQT  104 (795)
Q Consensus        25 ~~~l~~~~~l~~~~~l~s~~g~f~lgf~~~~~~~~~~~~iw~~~~~~t~vW~an~~~p~~~~~~~l~~~~~g~lvl~~~~  104 (795)
                      .|+|.+||.|.+|++|.  +|.|.|+|+.+|+     +.||..   .++||.||++.|  +..+.|.++.||||||++++
T Consensus         1 ~~~L~~g~~L~~G~~l~--ng~~~l~~q~DGN-----Lvly~~---~~~vW~s~~~~~--~~~~~l~l~~~Gnlvl~~~~   68 (108)
T d1jpca_           1 DNILYSGETLSTGEFLN--YGSFVFIMQEDCN-----LVLYDV---DKPIWATNTGGL--SRSCFLSMQTDGNLVVYNPS   68 (108)
T ss_dssp             CCEEETTEEECTTCEEE--ETTEEEEECTTSC-----EEEEET---TEEEEECCCTTS--CSSCEEEECTTSCEEEECTT
T ss_pred             CCCccCCCEecCCCEEE--cCCEEEEECCCCe-----EEEEeC---CceeeEeCCCCC--CCccEEEEeccceEEEECCC
Confidence            47899999999999996  4999999999997     677765   489999999988  55678999999999999999


Q ss_pred             CceEEeecCCCCccccEEEEccCCCeEEeecCCCCCcccceecccCC
Q 003786          105 NGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQSFDH  151 (795)
Q Consensus       105 ~~~~Wst~~~~~~~~~~a~l~d~GNlvl~~~~~~~~~~~~~WqSFd~  151 (795)
                      |.+||+|++.+.....+|+|+||||||||+.        .+||||+|
T Consensus        69 g~~vWsS~t~~~~~~~~l~L~ddGNlVly~~--------~~W~S~t~  107 (108)
T d1jpca_          69 NKPIWASNTGGQNGNYVCILQKDRNVVIYGT--------DRWATGTH  107 (108)
T ss_dssp             CCEEEECCCCCSCSCEEEEECTTSCEEEEEC--------CCCCCCCC
T ss_pred             ccceEEccccCCCCcEEEEEcCCCCEEEeCC--------CcccCCCC
Confidence            9999999988776777889999999999962        48999987

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.87  E-value=6.3e-23  Score=201.21  Aligned_cols=164  Identities=17%  Similarity=0.173  Sum_probs=123.0

Q ss_pred             CccccccCcCCcccEEEeEecCcceEEEEEecccCc------------------cchHHHHHHHHHHHhcCCcccceeee
Q 003786          477 FSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSG------------------QGQEEFKNEIKLIAKLQHRNLVRLLG  538 (795)
Q Consensus       477 ~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l~h~niv~l~~  538 (795)
                      +.++++||+|+||.||+|+..+|++||||+++....                  .....+.+|...+.++.|+++++.++
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~   81 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYA   81 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEE
T ss_pred             chhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEE
Confidence            356789999999999999988899999998753210                  01123456889999999999998876


Q ss_pred             eeeecceeeEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhcCCCcEEeccCCCCcEEECCCCCeee
Q 003786          539 CCIELEEKILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKI  618 (795)
Q Consensus       539 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiHrDikp~NIll~~~~~vkL  618 (795)
                      +.    ..+++|||+++..+..          ++...+..++.|++++|.|||+++   |+||||||+|||+++++ ++|
T Consensus        82 ~~----~~~lvme~~~~~~~~~----------l~~~~~~~i~~ql~~~l~~lH~~g---iiHrDiKP~NILv~~~~-~~l  143 (191)
T d1zara2          82 WE----GNAVLMELIDAKELYR----------VRVENPDEVLDMILEEVAKFYHRG---IVHGDLSQYNVLVSEEG-IWI  143 (191)
T ss_dssp             EE----TTEEEEECCCCEEGGG----------CCCSCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEETTE-EEE
T ss_pred             ec----CCEEEEEeeccccccc----------hhhHHHHHHHHHHHHHHHHHhhCC---EEEccCChhheeeeCCC-EEE
Confidence            53    3479999998865532          456677889999999999999998   99999999999998655 899


Q ss_pred             eccccccccCCCcccccccccccccccccc------cccccCCCCcccchhhHHHHH
Q 003786          619 SDFGMARIFGGDELQSKTKRIVGTYGYMSP------EYAQQGLFSIKSDVFSFGVLL  669 (795)
Q Consensus       619 ~DFGla~~~~~~~~~~~~~~~~gt~~y~AP------E~~~~~~~~~k~DvwSlGvil  669 (795)
                      +|||+|.........          .|...      |. ....|+.++|+||+.--+
T Consensus       144 iDFG~a~~~~~~~~~----------~~l~rd~~~~~~~-f~r~y~~~~d~~s~~~~~  189 (191)
T d1zara2         144 IDFPQSVEVGEEGWR----------EILERDVRNIITY-FSRTYRTEKDINSAIDRI  189 (191)
T ss_dssp             CCCTTCEETTSTTHH----------HHHHHHHHHHHHH-HHHHHCCCCCHHHHHHHH
T ss_pred             EECCCcccCCCCCcH----------HHHHHHHHHHHHH-HcCCCCCcccHHHHHHHH
Confidence            999999765432211          11111      11 135688999999976444

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=99.86  E-value=6.6e-22  Score=173.37  Aligned_cols=107  Identities=19%  Similarity=0.320  Sum_probs=93.3

Q ss_pred             ccCCCCCccCCCCeEEeCCCeEEEEEeCCCCCCceEEEEEeccCCCeEEEecCCCCCCccCcceEEEeeCCceEEeCCCC
Q 003786           26 DNITPSRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPDTIVWVANRNSPIFDSNAVLTISNGGKLVLLNQTN  105 (795)
Q Consensus        26 ~~l~~~~~l~~~~~l~s~~g~f~lgf~~~~~~~~~~~~iw~~~~~~t~vW~an~~~p~~~~~~~l~~~~~g~lvl~~~~~  105 (795)
                      |+|.|||.|.+|++|.+  |.|.|+|+.+|+     +.++..   .++||+||++.|. ...+.|.|+.||||||+|++|
T Consensus         2 ~~L~~g~~L~~g~~l~~--g~~~l~~q~dgn-----Lvl~~~---~~~vW~ant~~~~-~~~~~l~l~~dGnLvl~~~~g   70 (109)
T d1kj1a_           2 NLLTNGEGLYAGQSLDV--EPYHFIMQEDCN-----LVLYDH---STSVWASNTGILG-KKGCKAVLQSDGNFVVYDAEG   70 (109)
T ss_dssp             CEEETTCEEETTCEEEE--TTEEEEECTTSC-----EEEEET---TEEEEECCCCCTT-CCCCEEEECTTSCEEEECSSS
T ss_pred             CCccCCCEEeCCCEEEe--CCEEEEecCCCe-----EEEEeC---CEEEEEeCCCCCC-ceeEEEEEcCCceEEEEeCCC
Confidence            78999999999999986  899999999887     555544   4899999999997 446889999999999999999


Q ss_pred             ceEEeecCCCCccccEEEEccCCCeEEeecCCCCCcccceecccCC
Q 003786          106 GTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQSFDH  151 (795)
Q Consensus       106 ~~~Wst~~~~~~~~~~a~l~d~GNlvl~~~~~~~~~~~~~WqSFd~  151 (795)
                      .+||+|+++.......|+|+||||||||++        .+|||+-|
T Consensus        71 ~~vW~s~t~~~~~~~~l~L~ddGNlvly~~--------~~W~S~t~  108 (109)
T d1kj1a_          71 RSLWASHSVRGNGNYVLVLQEDGNVVIYGS--------DIWSTGTY  108 (109)
T ss_dssp             CEEEECCCCCCSSCCEEEECTTSCEEEECC--------EEEECCCC
T ss_pred             cEEEEEeeECCCCCEEEEEeCCCcEEEECC--------CEecCCCc
Confidence            999999987666677889999999999962        49999865

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.70  E-value=4.8e-17  Score=143.87  Aligned_cols=103  Identities=17%  Similarity=0.351  Sum_probs=84.2

Q ss_pred             ccCCCCCccCCCCeEEeCCCeEEEEEeCCCCCCceEEEEEeccCCCeEEEecCCCCCCccCcceEEEeeCCceEEeCCCC
Q 003786           26 DNITPSRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPDTIVWVANRNSPIFDSNAVLTISNGGKLVLLNQTN  105 (795)
Q Consensus        26 ~~l~~~~~l~~~~~l~s~~g~f~lgf~~~~~~~~~~~~iw~~~~~~t~vW~an~~~p~~~~~~~l~~~~~g~lvl~~~~~  105 (795)
                      ++|.++|+|    .+.+..|.|.|.|+.+|+     |.++ +  ..++||.||+..+  +..+.|.|+.||+|||+|++|
T Consensus        15 ~~l~~~q~l----~~~~~~~~y~l~mQ~DGN-----LVLy-~--~~~~vWssnt~~~--~~~~~l~l~~dGnLvL~d~~g   80 (119)
T d1b2pa_          15 QILHATESL----EILFGTHVYRFIMQTDCN-----LVLY-D--NNNPIWATNTGGL--GNGCRAVLQPDGVLVVITNEN   80 (119)
T ss_dssp             CEEETTCEE----EEEETTEEEEEEECTTSC-----EEEE-E--TTEEEEECCCTTS--CSSCEEEECTTSCEEEECTTC
T ss_pred             CEEeCCCeE----EEecCCceEEEEECCCCc-----EEEE-E--CCeEEEEecCCCC--CcceEEEEEeCCCEEEECCCC
Confidence            455555555    346679999999999997     4443 3  2589999999877  446889999999999999999


Q ss_pred             ceEEeecCCCCccccEEEEccCCCeEEeecCCCCCcccceecccC
Q 003786          106 GTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQSFD  150 (795)
Q Consensus       106 ~~~Wst~~~~~~~~~~a~l~d~GNlvl~~~~~~~~~~~~~WqSFd  150 (795)
                      .+||++++.+.....+++|+||||||||+        .++|||-.
T Consensus        81 ~~vWsS~t~~~~~~~~l~Lq~DGNlvlYg--------~~~W~S~T  117 (119)
T d1b2pa_          81 VTVWQSPVAGKAGHYVLVLQPDRNVVIYG--------DALWATQT  117 (119)
T ss_dssp             CEEEECSCCCCSSCEEEEECTTSCEEEEE--------SEEEECCC
T ss_pred             cEEEECCCcCCCCceEEEEcCCCCEEEEC--------CCEeccCC
Confidence            99999999877677788999999999995        36999864

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.65  E-value=9.6e-17  Score=142.42  Aligned_cols=101  Identities=21%  Similarity=0.264  Sum_probs=85.4

Q ss_pred             EEEeccC-CCeEEEecCCCCCCccCcceEEEeeCCceEEeCCCCceEEeecCCCCccccEEEEccCCCeEEeecCCCCCc
Q 003786           63 GIWYKQI-PDTIVWVANRNSPIFDSNAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSS  141 (795)
Q Consensus        63 ~iw~~~~-~~t~vW~an~~~p~~~~~~~l~~~~~g~lvl~~~~~~~~Wst~~~~~~~~~~a~l~d~GNlvl~~~~~~~~~  141 (795)
                      -|||..+ .++++|++|++.|+....-+|.++.||||||++. +.++|++++.+.+..+.|.|+++|||||+|     .+
T Consensus        11 ~il~~~~~~~~~~~~l~~~q~l~~g~y~L~~q~DGNLvL~~~-~~~vW~s~t~~~~~~~~~~l~~~GnLvl~d-----~~   84 (120)
T d1dlpa2          11 SILYSTQGNDNHPQTLHATQSLQLSPYRLSMETDCNLVLFDR-DDRVWSTNTAGKGTGCRAVLQPNGRMDVLT-----NQ   84 (120)
T ss_dssp             EECCCC--CCCCCCEECSSCCCBCSSCEEEEETTTEEEEEBT-TBCCSCCCCCSSCSSCEEEEETTTEEEEEE-----TT
T ss_pred             eEEEcCCCCCCcccEEcCCCeeEcCCEEEEEcCCCcEEEecC-CcEEEEEccccCCCcEEEEEeCCeeEEEEc-----CC
Confidence            5889888 6799999999999977777899999999999985 678999999877777889999999999998     46


Q ss_pred             ccceecccCCCchhhhccCeeccccccCcceeEEEecCCCCCCCCceEEeeccCCcceE
Q 003786          142 EDYLWQSFDHPSDTLLAGMKLGWDLKTGLERYQTSWKSDDDPSPGNYTHRLDIHVLPKL  200 (795)
Q Consensus       142 ~~~~WqSFd~PTDtlLpgqkl~~~~~~~~~~~l~Sw~s~~dps~G~ys~~~~~~~~~~~  200 (795)
                      +++|||||.                               +.++|.|.+.++.+|...+
T Consensus        85 ~~~lW~S~t-------------------------------~~~~~~~~l~Lq~DGnlvl  112 (120)
T d1dlpa2          85 NIAVWTSGN-------------------------------SRSAGRYVFVLQPDRNLAI  112 (120)
T ss_dssp             TEEEEECCC-------------------------------CCSSSCCEEEECSSSCEEE
T ss_pred             CCEEEEeCC-------------------------------CCCCCcEEEEECCCCcEEE
Confidence            789999984                               2356789999998886543

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.56  E-value=3.6e-15  Score=130.70  Aligned_cols=98  Identities=22%  Similarity=0.339  Sum_probs=80.2

Q ss_pred             CccCCCCeEEeCCCeEEEEEeCCCCCCceEEEEEeccCCCeEEEecCCCCCCccCcceEEEeeCCceEEeCCCCceEEee
Q 003786           32 RFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPDTIVWVANRNSPIFDSNAVLTISNGGKLVLLNQTNGTIWSS  111 (795)
Q Consensus        32 ~~l~~~~~l~s~~g~f~lgf~~~~~~~~~~~~iw~~~~~~t~vW~an~~~p~~~~~~~l~~~~~g~lvl~~~~~~~~Wst  111 (795)
                      |.|.++|.|.  +|.|.|.|+.+|+     |.++..   .++||.+|+..   ...+++.|+.||||||+|.++.+||++
T Consensus        15 ~tl~~~~~l~--~g~~~l~~q~DGN-----LvL~~~---~~~vW~s~t~~---~~~~~l~l~~dGNLvl~d~~~~~vWsS   81 (115)
T d1dlpa1          15 QTLHAAQSLE--LSSFRFTMQSDCN-----LVLFDS---DVRVWASNTAG---ATGCRAVLQSDGLLVILTAQNTIRWSS   81 (115)
T ss_dssp             SCCCTTCEEC--STTEEEEECTTSC-----EEEEES---SSEEECCCCCS---CSCCBCCBCSSSCBCCBCTTTCCSCCC
T ss_pred             ceecCCCcEE--cCCEEEEECCCCe-----EEEEcC---CeeEEEcccCC---CCceEEEEeccCCEEEEccCCCEEEEc
Confidence            5566666663  5889999999997     666553   48999999764   336789999999999999999999999


Q ss_pred             cCCCCccccEEEEccCCCeEEeecCCCCCcccceecccC
Q 003786          112 NLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQSFD  150 (795)
Q Consensus       112 ~~~~~~~~~~a~l~d~GNlvl~~~~~~~~~~~~~WqSFd  150 (795)
                      .+.......+++|++|||||||+        ..+|+|-.
T Consensus        82 ~t~~~~g~y~l~Lq~DGNlvlY~--------~~~Wssgt  112 (115)
T d1dlpa1          82 GTKGSIGNYVLVLQPDRTVTIYG--------PGLWDSGT  112 (115)
T ss_dssp             CCCCCSSCCEEEECSSSCEEEEC--------SEEEECSC
T ss_pred             CCCCCCCCEEEEECCCCcEEEeC--------CCeecCCC
Confidence            99877777889999999999995        26899853

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.52  E-value=4.3e-15  Score=130.15  Aligned_cols=109  Identities=23%  Similarity=0.256  Sum_probs=87.1

Q ss_pred             EEeccC-CCeEEEecCCCCCCccCcceEEEeeCCceEEeCCCCceEEeecCCCCccccEEEEccCCCeEEeecCCCCCcc
Q 003786           64 IWYKQI-PDTIVWVANRNSPIFDSNAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSE  142 (795)
Q Consensus        64 iw~~~~-~~t~vW~an~~~p~~~~~~~l~~~~~g~lvl~~~~~~~~Wst~~~~~~~~~~a~l~d~GNlvl~~~~~~~~~~  142 (795)
                      |||.-. ..+..|+.+.+.++.+...+|.|+.||||||++ .+.++|++++.+. .++.|.|+++|||||++     ..+
T Consensus         3 ~~~~~~~~~~~~~tl~~~~~l~~g~~~l~~q~DGNLvL~~-~~~~vW~s~t~~~-~~~~l~l~~dGNLvl~d-----~~~   75 (115)
T d1dlpa1           3 ILFGLSHEGSHPQTLHAAQSLELSSFRFTMQSDCNLVLFD-SDVRVWASNTAGA-TGCRAVLQSDGLLVILT-----AQN   75 (115)
T ss_dssp             CCBCSSSSSCSCSCCCTTCEECSTTEEEEECTTSCEEEEE-SSSEEECCCCCSC-SCCBCCBCSSSCBCCBC-----TTT
T ss_pred             EEEecCCCCCCcceecCCCcEEcCCEEEEECCCCeEEEEc-CCeeEEEcccCCC-CceEEEEeccCCEEEEc-----cCC
Confidence            555533 457779999999998777899999999999998 5678999998764 45678999999999998     467


Q ss_pred             cceecccCCCchhhhccCeeccccccCcceeEEEecCCCCCCCCceEEeeccCCcceEEEEcCceeEEeeCC
Q 003786          143 DYLWQSFDHPSDTLLAGMKLGWDLKTGLERYQTSWKSDDDPSPGNYTHRLDIHVLPKLCTYNGSVKLLCSGP  214 (795)
Q Consensus       143 ~~~WqSFd~PTDtlLpgqkl~~~~~~~~~~~l~Sw~s~~dps~G~ys~~~~~~~~~~~~~~~~s~~~~~sg~  214 (795)
                      .+||||+-                               +.++|.|.+.++++|..  ++|.  .++|.+|.
T Consensus        76 ~~vWsS~t-------------------------------~~~~g~y~l~Lq~DGNl--vlY~--~~~Wssgt  112 (115)
T d1dlpa1          76 TIRWSSGT-------------------------------KGSIGNYVLVLQPDRTV--TIYG--PGLWDSGT  112 (115)
T ss_dssp             CCSCCCCC-------------------------------CCCSSCCEEEECSSSCE--EEEC--SEEEECSC
T ss_pred             CEEEEcCC-------------------------------CCCCCCEEEEECCCCcE--EEeC--CCeecCCC
Confidence            89999863                               34678999999999875  4453  46888765

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.38  E-value=4e-13  Score=118.68  Aligned_cols=98  Identities=20%  Similarity=0.365  Sum_probs=77.4

Q ss_pred             CCccCCCCeEEeCCCeEEEEEeCCCCCCceEEEEEeccCCCeEEEecCCCCCCccCcceEEEeeCCceEEeCCCCceEEe
Q 003786           31 SRFIRDGEKLVSSSQRFELGFFSPGKSKYRYLGIWYKQIPDTIVWVANRNSPIFDSNAVLTISNGGKLVLLNQTNGTIWS  110 (795)
Q Consensus        31 ~~~l~~~~~l~s~~g~f~lgf~~~~~~~~~~~~iw~~~~~~t~vW~an~~~p~~~~~~~l~~~~~g~lvl~~~~~~~~Ws  110 (795)
                      .+.|.+++.|.  .|.|.|.|..+|+     |.|+..   ..+||.++....  +..+.+.|+.+|||||+|.++.++|+
T Consensus        23 ~~~l~~~q~l~--~g~y~L~~q~DGN-----LvL~~~---~~~vW~s~t~~~--~~~~~~~l~~~GnLvl~d~~~~~lW~   90 (120)
T d1dlpa2          23 PQTLHATQSLQ--LSPYRLSMETDCN-----LVLFDR---DDRVWSTNTAGK--GTGCRAVLQPNGRMDVLTNQNIAVWT   90 (120)
T ss_dssp             CCEECSSCCCB--CSSCEEEEETTTE-----EEEEBT---TBCCSCCCCCSS--CSSCEEEEETTTEEEEEETTTEEEEE
T ss_pred             ccEEcCCCeeE--cCCEEEEEcCCCc-----EEEecC---CcEEEEEccccC--CCcEEEEEeCCeeEEEEcCCCCEEEE
Confidence            34555555553  3779999998886     556543   478999986543  55678999999999999999999999


Q ss_pred             ecCCCCccccEEEEccCCCeEEeecCCCCCcccceecc
Q 003786          111 SNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQS  148 (795)
Q Consensus       111 t~~~~~~~~~~a~l~d~GNlvl~~~~~~~~~~~~~WqS  148 (795)
                      |++.+.....+++|++|||||||+        ..+|.|
T Consensus        91 S~t~~~~~~~~l~Lq~DGnlvlY~--------~~~W~t  120 (120)
T d1dlpa2          91 SGNSRSAGRYVFVLQPDRNLAIYG--------GALWTT  120 (120)
T ss_dssp             CCCCCSSSCCEEEECSSSCEEEEC--------CCCCBC
T ss_pred             eCCCCCCCcEEEEECCCCcEEEeC--------CCcccC
Confidence            999877677788999999999995        258976

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=98.95  E-value=1.4e-09  Score=95.30  Aligned_cols=85  Identities=25%  Similarity=0.300  Sum_probs=65.3

Q ss_pred             eEEEeeCCceEEeCCCCceEEeecCCCCccccEEEEccCCCeEEeecCCCCCcccceecccCCCchhhhccCeecccccc
Q 003786           89 VLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQSFDHPSDTLLAGMKLGWDLKT  168 (795)
Q Consensus        89 ~l~~~~~g~lvl~~~~~~~~Wst~~~~~~~~~~a~l~d~GNlvl~~~~~~~~~~~~~WqSFd~PTDtlLpgqkl~~~~~~  168 (795)
                      .|.++.||||||+++ +.++|++++.+....+.+.|+++|||||++     ..+.+||+|.-                  
T Consensus        33 ~l~mQ~DGNLVLy~~-~~~vWssnt~~~~~~~~l~l~~dGnLvL~d-----~~g~~vWsS~t------------------   88 (119)
T d1b2pa_          33 RFIMQTDCNLVLYDN-NNPIWATNTGGLGNGCRAVLQPDGVLVVIT-----NENVTVWQSPV------------------   88 (119)
T ss_dssp             EEEECTTSCEEEEET-TEEEEECCCTTSCSSCEEEECTTSCEEEEC-----TTCCEEEECSC------------------
T ss_pred             EEEECCCCcEEEEEC-CeEEEEecCCCCCcceEEEEEeCCCEEEEC-----CCCcEEEECCC------------------
Confidence            588999999999975 568999999877667788999999999998     45778897531                  


Q ss_pred             CcceeEEEecCCCCCCCCceEEeeccCCcceEEEEcCceeEEeeCC
Q 003786          169 GLERYQTSWKSDDDPSPGNYTHRLDIHVLPKLCTYNGSVKLLCSGP  214 (795)
Q Consensus       169 ~~~~~l~Sw~s~~dps~G~ys~~~~~~~~~~~~~~~~s~~~~~sg~  214 (795)
                                   .-+.|.|.+.++.+|...+  |.  .++|.++.
T Consensus        89 -------------~~~~~~~~l~Lq~DGNlvl--Yg--~~~W~S~T  117 (119)
T d1b2pa_          89 -------------AGKAGHYVLVLQPDRNVVI--YG--DALWATQT  117 (119)
T ss_dssp             -------------CCCSSCEEEEECTTSCEEE--EE--SEEEECCC
T ss_pred             -------------cCCCCceEEEEcCCCCEEE--EC--CCEeccCC
Confidence                         1134678889998886543  42  35787654

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Snowdrop (Galanthus nivalis) [TaxId: 4670]

Probab=98.93  E-value=1.6e-09  Score=93.51  Aligned_cols=55  Identities=27%  Similarity=0.492  Sum_probs=47.3

Q ss_pred             ceEEEeeCCceEEeCCCCceEEeecCCCCccccEEEEccCCCeEEeecCCCCCcccceecc
Q 003786           88 AVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQS  148 (795)
Q Consensus        88 ~~l~~~~~g~lvl~~~~~~~~Wst~~~~~~~~~~a~l~d~GNlvl~~~~~~~~~~~~~WqS  148 (795)
                      -+|.++.||||||++ .+.+||++++.+.+..+.+.|+++|||||++     ..+.+||+|
T Consensus        21 ~~l~~q~DGNLvly~-~~~~vW~s~~~~~~~~~~l~l~~~Gnlvl~~-----~~g~~vWsS   75 (108)
T d1jpca_          21 FVFIMQEDCNLVLYD-VDKPIWATNTGGLSRSCFLSMQTDGNLVVYN-----PSNKPIWAS   75 (108)
T ss_dssp             EEEEECTTSCEEEEE-TTEEEEECCCTTSCSSCEEEECTTSCEEEEC-----TTCCEEEEC
T ss_pred             EEEEECCCCeEEEEe-CCceeeEeCCCCCCCccEEEEeccceEEEEC-----CCccceEEc
Confidence            468899999999997 5679999999877667788999999999998     467889986

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=98.76  E-value=2e-08  Score=86.42  Aligned_cols=87  Identities=26%  Similarity=0.355  Sum_probs=63.7

Q ss_pred             cceEEEeeCCceEEeCCCCceEEeecCCCCc-cccEEEEccCCCeEEeecCCCCCcccceecccCCCchhhhccCeeccc
Q 003786           87 NAVLTISNGGKLVLLNQTNGTIWSSNLSREV-KNPVAQLLDTGNLVVRDNFSSNSSEDYLWQSFDHPSDTLLAGMKLGWD  165 (795)
Q Consensus        87 ~~~l~~~~~g~lvl~~~~~~~~Wst~~~~~~-~~~~a~l~d~GNlvl~~~~~~~~~~~~~WqSFd~PTDtlLpgqkl~~~  165 (795)
                      .-.|.|+.||||||++ .+.+||++++.... ..+.+.|+++|||||++     ..+.++|+|=                
T Consensus        20 ~~~l~~q~dgnLvl~~-~~~~vW~ant~~~~~~~~~l~l~~dGnLvl~~-----~~g~~vW~s~----------------   77 (109)
T d1kj1a_          20 PYHFIMQEDCNLVLYD-HSTSVWASNTGILGKKGCKAVLQSDGNFVVYD-----AEGRSLWASH----------------   77 (109)
T ss_dssp             TEEEEECTTSCEEEEE-TTEEEEECCCCCTTCCCCEEEECTTSCEEEEC-----SSSCEEEECC----------------
T ss_pred             CEEEEecCCCeEEEEe-CCEEEEEeCCCCCCceeEEEEEcCCceEEEEe-----CCCcEEEEEe----------------
Confidence            3568899999999997 56799999987543 35678999999999998     4678899861                


Q ss_pred             cccCcceeEEEecCCCCCCCCceEEeeccCCcceEEEEcCceeEEeeCC
Q 003786          166 LKTGLERYQTSWKSDDDPSPGNYTHRLDIHVLPKLCTYNGSVKLLCSGP  214 (795)
Q Consensus       166 ~~~~~~~~l~Sw~s~~dps~G~ys~~~~~~~~~~~~~~~~s~~~~~sg~  214 (795)
                                     ...+.|.|.+.++.+|...  ++.  .++|.|+.
T Consensus        78 ---------------t~~~~~~~~l~L~ddGNlv--ly~--~~~W~S~t  107 (109)
T d1kj1a_          78 ---------------SVRGNGNYVLVLQEDGNVV--IYG--SDIWSTGT  107 (109)
T ss_dssp             ---------------CCCCSSCCEEEECTTSCEE--EEC--CEEEECCC
T ss_pred             ---------------eECCCCCEEEEEeCCCcEE--EEC--CCEecCCC
Confidence                           1113466888898888654  453  35786654

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.60  E-value=1.6e-07  Score=94.39  Aligned_cols=150  Identities=15%  Similarity=0.073  Sum_probs=108.2

Q ss_pred             HhHHHHccCCccccccCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcC-Ccccceeeeeeeeccee
Q 003786          468 ASVSAATANFSTENKLGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQ-HRNLVRLLGCCIELEEK  546 (795)
Q Consensus       468 ~~i~~~~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~  546 (795)
                      .++....+.|+..+..+.++.+.||+... +++.++||+...........+.+|...+..+. +--+.+++.+..+++..
T Consensus         7 ~~l~~~~~~~~~~~~~~G~s~~~v~rv~~-~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~   85 (263)
T d1j7la_           7 PELKKLIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWS   85 (263)
T ss_dssp             HHHHHHHTTSEEEECSCCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEE
T ss_pred             HHHHHhhhceEEEEcCCCCCCCcEEEEEe-CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCce
Confidence            34556667888877766666678998864 56778899887665556667889999988875 43456788888888889


Q ss_pred             eEEeecCCCCChhhhhhccCCcccCChhhHHHHHHHHHHHHHHHHhc---------------------------------
Q 003786          547 ILIYEYMPNKSLDFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLHQY---------------------------------  593 (795)
Q Consensus       547 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---------------------------------  593 (795)
                      ++|||+++|..+.....        +......++.++++.++.||+.                                 
T Consensus        86 ~lv~~~l~G~~~~~~~~--------~~~~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (263)
T d1j7la_          86 NLLMSEADGVLCSEEYE--------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCEN  157 (263)
T ss_dssp             EEEEECCSSEEHHHHTT--------TCSCHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGG
T ss_pred             EEEEEeccccccccccc--------ccccHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhc
Confidence            99999999988755431        1223334555566666666642                                 


Q ss_pred             -----------------------CCCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          594 -----------------------SRLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       594 -----------------------~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                                             ....++|+|+.|.|||+++++.+-|+||+.+..
T Consensus       158 ~~~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T d1j7la_         158 WEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             GSTTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             ccccccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhccc
Confidence                                   112389999999999999776667999998764

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

Probab=98.58  E-value=1.3e-07  Score=81.78  Aligned_cols=88  Identities=23%  Similarity=0.410  Sum_probs=64.5

Q ss_pred             cceEEEeeCCceEEeCCCCceEEeecCCCCccccEEEEccCCCeEEeecCCCCCcccceecccCCCchhhhccCeecccc
Q 003786           87 NAVLTISNGGKLVLLNQTNGTIWSSNLSREVKNPVAQLLDTGNLVVRDNFSSNSSEDYLWQSFDHPSDTLLAGMKLGWDL  166 (795)
Q Consensus        87 ~~~l~~~~~g~lvl~~~~~~~~Wst~~~~~~~~~~a~l~d~GNlvl~~~~~~~~~~~~~WqSFd~PTDtlLpgqkl~~~~  166 (795)
                      .-.|.|+.||||||++ .+.+||++++.+....+.++|+.+|||||++.      ++.+|.|                  
T Consensus        20 ~~~l~~q~DGNLvly~-~~~~vW~s~~~~~~~~~~l~l~~dGnLvl~~~------~~~~w~s------------------   74 (112)
T d1xd5a_          20 GYLFIIQNDCNLVLYD-NNRAVWASGTNGKASGCVLKMQNDGNLVIYSG------SRAIWAS------------------   74 (112)
T ss_dssp             TEEEEECTTSCEEEEE-TTEEEEECCCTTSCSSEEEEECTTSCEEEEET------TEEEEEC------------------
T ss_pred             CEEEEEcCCCCEEEEc-CCcEEEEccCccCCCCcEEEEeccccEEEEec------CCeEEEE------------------
Confidence            3578899999999997 56799999987666667789999999999972      4456653                  


Q ss_pred             ccCcceeEEEecCCCCCCCCceEEeeccCCcceEEEEcC-ceeEEeeCC
Q 003786          167 KTGLERYQTSWKSDDDPSPGNYTHRLDIHVLPKLCTYNG-SVKLLCSGP  214 (795)
Q Consensus       167 ~~~~~~~l~Sw~s~~dps~G~ys~~~~~~~~~~~~~~~~-s~~~~~sg~  214 (795)
                                   ...-..|.|.+.++.+|...  +++. ..+.|.|+.
T Consensus        75 -------------~t~~~~~~~~l~L~ddGNlv--ly~~~~~~~W~S~t  108 (112)
T d1xd5a_          75 -------------NTNRQNGNYYLILQRDRNVV--IYDNSNNAIWATHT  108 (112)
T ss_dssp             -------------CCCCSCCCCEEEECTTSCEE--EECTTSCEEEECCC
T ss_pred             -------------eeccCCCceEEEEcCCCCEE--EECCCCcEEecCCC
Confidence                         11223466888998888654  4443 356887765

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=97.88  E-value=3.5e-05  Score=76.29  Aligned_cols=131  Identities=18%  Similarity=0.168  Sum_probs=86.9

Q ss_pred             ccCcCCc-ccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCc--ccceeeeeeeecceeeEEeecCCCCCh
Q 003786          482 KLGEGGF-GPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHR--NLVRLLGCCIELEEKILIYEYMPNKSL  558 (795)
Q Consensus       482 ~LG~G~~-g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~~~~~~~~~~lv~E~~~~gsL  558 (795)
                      .+..|.. +.||+....++..+++|.....   ....+..|...|+.+...  .+.+++.+..+.+..++|||+++|..+
T Consensus        17 ~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~---~~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~   93 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL   93 (255)
T ss_dssp             ECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred             EcCCcccCCeEEEEEeCCCCEEEEEeCCcc---CHhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecccc
Confidence            4555554 5789998877888999986543   234578888888877533  355678887888888999999998766


Q ss_pred             hhhhhccCCcccCChhhHHHHHHHHHHHHHHHH-----------------------------------------------
Q 003786          559 DFFLFDSTKENLLGWGTRVRIIEGIAQGLLYLH-----------------------------------------------  591 (795)
Q Consensus       559 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH-----------------------------------------------  591 (795)
                      .....           .....+.++++.|.-||                                               
T Consensus        94 ~~~~~-----------~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (255)
T d1nd4a_          94 LSSHL-----------APAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELF  162 (255)
T ss_dssp             TTSCC-----------CHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHH
T ss_pred             ccccc-----------cHHHHHHHHHHHHHHHccCChhhCCCcccchhhHHHHHHHHHHhhhccccccchhhhhHHHHHH
Confidence            43210           00111122222222222                                               


Q ss_pred             ----hc----CCCcEEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          592 ----QY----SRLRVIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       592 ----~~----~~~~iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                          ..    ....++|+|+.|.|||++.+..+-|+||+.+..
T Consensus       163 ~~l~~~~~~~~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~~~  205 (255)
T d1nd4a_         163 ARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV  205 (255)
T ss_dssp             HHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             HHHHHhCCccCCceEEeCCCCCcceEEeCCceEEEEEchhccc
Confidence                21    122489999999999999876678999988753

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=97.61  E-value=0.00014  Score=77.05  Aligned_cols=76  Identities=12%  Similarity=0.167  Sum_probs=50.7

Q ss_pred             ccccCcCCcccEEEeEecC-cceEEEEEeccc-------CccchHHHHHHHHHHHhcC-C-cc-cceeeeeeeecceeeE
Q 003786          480 ENKLGEGGFGPVYKGRLLN-GQEVAVKRLSSQ-------SGQGQEEFKNEIKLIAKLQ-H-RN-LVRLLGCCIELEEKIL  548 (795)
Q Consensus       480 ~~~LG~G~~g~Vy~~~~~~-~~~vavK~~~~~-------~~~~~~~~~~E~~~l~~l~-h-~n-iv~l~~~~~~~~~~~l  548 (795)
                      .+.||.|....||+++..+ ++.++||.-...       .....++...|++.|+.+. + |. +.+++.+  +.+..++
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~l  108 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  108 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEE
Confidence            3579999999999998654 678999964321       1223456778998888773 2 33 4445543  5567789


Q ss_pred             EeecCCCCC
Q 003786          549 IYEYMPNKS  557 (795)
Q Consensus       549 v~E~~~~gs  557 (795)
                      |||++++..
T Consensus       109 vmE~L~~~~  117 (392)
T d2pula1         109 VMEDLSHLK  117 (392)
T ss_dssp             EECCCTTSE
T ss_pred             EEeccCCcc
Confidence            999998754

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=96.96  E-value=0.0019  Score=65.96  Aligned_cols=136  Identities=14%  Similarity=0.146  Sum_probs=80.8

Q ss_pred             cccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCccc--ceee-----eeeeecceeeEEeecCCCCChhh
Q 003786          488 FGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNL--VRLL-----GCCIELEEKILIYEYMPNKSLDF  560 (795)
Q Consensus       488 ~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni--v~l~-----~~~~~~~~~~lv~E~~~~gsL~~  560 (795)
                      --.||+++.++|+.+++|+.+.. ....+++..|...|..|....+  +..+     ..+......+.++++++|..++.
T Consensus        35 EN~vy~v~~~dg~~~VlK~~rp~-~~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~~~~  113 (325)
T d1zyla1          35 ENRVYQFQDEDRRRFVVKFYRPE-RWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEA  113 (325)
T ss_dssp             SSEEEEECCTTCCCEEEEEECTT-TSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEECCS
T ss_pred             cceeEEEEcCCCCEEEEEEeCCC-CCCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcCCCC
Confidence            35799999989999999998654 2356778899999988853222  1111     12334556678899988754321


Q ss_pred             -----h------h---h----c--cCCcc-------------------cCChhhHHHHHHHHHHHHHHHHhc----CCCc
Q 003786          561 -----F------L---F----D--STKEN-------------------LLGWGTRVRIIEGIAQGLLYLHQY----SRLR  597 (795)
Q Consensus       561 -----~------l---~----~--~~~~~-------------------~l~~~~~~~i~~~i~~~l~~LH~~----~~~~  597 (795)
                           +      +   +    .  ...+.                   .++......+...+.+.+..+...    ....
T Consensus       114 ~~~~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~~  193 (325)
T d1zyla1         114 DNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVL  193 (325)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCE
T ss_pred             CCHHHHHHHHHHHHHHHhhcccCCccccCCCCHHHHhhhhHHHHHHcCcCCHHHHHHHHHHHHHHHHHHHHhccccCCce
Confidence                 0      0   0    0  00011                   112222222332333334444332    2346


Q ss_pred             EEeccCCCCcEEECCCCCeeeeccccccc
Q 003786          598 VIHRDLKASNILLDKDMNPKISDFGMARI  626 (795)
Q Consensus       598 iiHrDikp~NIll~~~~~vkL~DFGla~~  626 (795)
                      +||+|+.|.|||++.+  ..++||+-+..
T Consensus       194 liHgDlh~~NvL~~~~--~~~IDFdd~~~  220 (325)
T d1zyla1         194 RLHGDCHAGNILWRDG--PMFVDLDDARN  220 (325)
T ss_dssp             ECCSSCSGGGEEESSS--EEECCCTTCCE
T ss_pred             eecCCCCcccEEEeCC--ceEEechhccc
Confidence            8999999999999743  45889998864

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.77  E-value=0.0019  Score=67.92  Aligned_cols=72  Identities=19%  Similarity=0.292  Sum_probs=50.1

Q ss_pred             cccCcCCcccEEEeEecC--------cceEEEEEecccCccchHHHHHHHHHHHhcCCcccc-eeeeeeeecceeeEEee
Q 003786          481 NKLGEGGFGPVYKGRLLN--------GQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRNLV-RLLGCCIELEEKILIYE  551 (795)
Q Consensus       481 ~~LG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~~~~~~~~~~~lv~E  551 (795)
                      ++|+.|-.-.+|++...+        .+.|.+++...  ........+|..+++.+.-.++. ++++++..    .+|+|
T Consensus        48 ~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~--~~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~e  121 (395)
T d1nw1a_          48 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFN--PETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE  121 (395)
T ss_dssp             EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECS--CCCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred             EEcCCccccceEEEEeCCCCccccCCCCcEEEEecCC--cchhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceEEE
Confidence            678889999999998643        24566666542  23344567899999988644554 67776642    68999


Q ss_pred             cCCCCCh
Q 003786          552 YMPNKSL  558 (795)
Q Consensus       552 ~~~~gsL  558 (795)
                      |++|..+
T Consensus       122 fi~g~~l  128 (395)
T d1nw1a_         122 YIPSRPL  128 (395)
T ss_dssp             CCCEEEC
T ss_pred             EeccccC
Confidence            9987654

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=95.73  E-value=0.047  Score=54.65  Aligned_cols=157  Identities=11%  Similarity=0.003  Sum_probs=81.4

Q ss_pred             cHHhHHHHccCCccccc-----cCcCCcccEEEeEecCcceEEEEEecccCccchHHHHHHHHHHHhcCCcc-----cce
Q 003786          466 SLASVSAATANFSTENK-----LGEGGFGPVYKGRLLNGQEVAVKRLSSQSGQGQEEFKNEIKLIAKLQHRN-----LVR  535 (795)
Q Consensus       466 ~~~~i~~~~~~~~~~~~-----LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-----iv~  535 (795)
                      +.+++.....+|.+++.     |..|---+.|+.+..+ ..+++|++...  ...+++..|+++|..|.+.+     .+.
T Consensus         4 s~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~-g~yVLri~~~~--~~~~~l~~~~~~l~~L~~~g~pvp~pi~   80 (316)
T d2ppqa1           4 TEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTK-DPLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLPLP   80 (316)
T ss_dssp             CHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESS-CCEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCC
T ss_pred             CHHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEECC-CcEEEEEcCCC--CCHHHHHHHHHHHHhhhhccccccccce
Confidence            34455566666766433     4456667789988654 46999998653  23456677788887774322     221


Q ss_pred             ee-e--eeeecceeeEEeecCCCCChhhhh--------------h----cc--C------------------CcccCChh
Q 003786          536 LL-G--CCIELEEKILIYEYMPNKSLDFFL--------------F----DS--T------------------KENLLGWG  574 (795)
Q Consensus       536 l~-~--~~~~~~~~~lv~E~~~~gsL~~~l--------------~----~~--~------------------~~~~l~~~  574 (795)
                      .. |  +.........++.++.+.......              +    ..  .                  ........
T Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (316)
T d2ppqa1          81 RKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEK  160 (316)
T ss_dssp             BTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTST
T ss_pred             ecCCCcceeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhhcch
Confidence            11 0  112233445556555543321100              0    00  0                  00001111


Q ss_pred             hHHHHHHHHHHHHHHHHhc-CCCcEEeccCCCCcEEECCCCCeeeecccccc
Q 003786          575 TRVRIIEGIAQGLLYLHQY-SRLRVIHRDLKASNILLDKDMNPKISDFGMAR  625 (795)
Q Consensus       575 ~~~~i~~~i~~~l~~LH~~-~~~~iiHrDikp~NIll~~~~~vkL~DFGla~  625 (795)
                      .....+..+...+...+.. -+.++||+|+.++||+++.+...-|.||+.+.
T Consensus       161 ~~~~~l~~~~~~~~~~~~~~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         161 GLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC  212 (316)
T ss_dssp             THHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             hHHHHHHHHHHhhhccCccccccccccCCcchhhhhcccccceeEecccccc
Confidence            2222233333333333321 23469999999999999988777899999975

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.04  E-value=0.07  Score=33.30  Aligned_cols=32  Identities=31%  Similarity=0.626  Sum_probs=25.7

Q ss_pred             ccCCCCcCCCCCcccCCC-CCCCCCccccccccC
Q 003786          285 RFCQFYGHCGANSICSFD-KKPHCECLKGFELKS  317 (795)
Q Consensus       285 ~~C~~~g~CG~~g~C~~~-~~~~C~C~~gf~~~~  317 (795)
                      |+|.+-..|| +|.|+.- ..-.|.|-.||+|..
T Consensus         2 dECsignpCG-nGTCtNviGgFec~C~~GFepgp   34 (39)
T d1emoa2           2 DECSVGNPCG-NGTCKNVIGGFECTCEEGFEPGP   34 (39)
T ss_dssp             CGGGTTCSSS-SSCEEECSSSEEECCSSSSCCCS
T ss_pred             CccccCCccC-CceeeecccceEEeecCCcCCCc
Confidence            6899999999 6889743 345799999999864