BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>003788
MNELKDQVCSSWFAPVGSASDYPLLSKWVIYGELGNDNGGSSDEISPIYSLWATFIGLYI
ANYVVERSTGWALTHPLSVEEYEKMKKKQLKPEFLDMVPWYSGTSADLFKTVFDLLVSVT
VFVGRFDMRMMQAAMNKDQEGAQHGDLLYDHLSEKEDLWFDFMADTGDGGNSSYSVARLL
AQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPPPWYKKDH
VAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFMRFICHKSWLGGWFMPQKKSY
FALQLPKGWWVFGLDLALHCDIDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFN
NVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGGAFLHPT
HVFSNFRKFYGTTYESKAAYPSFEDSSRIALGNILKFRKKNWQFDFIGGIVYFVLVFSMF
PQCELNHILREDSFSGHLRSFFGTVWNAFMYVLEHSYVSFAGALLLLIVAITFVPSKLSR
KKRAMIGVLHVSAHLAAALILMLLLELGVETCIQHKLLATSGYHTLYQWYRSVESEHFPD
PTGLRARIEQWTFGLYPACIKYLMSAFDIPEVMAVTRSNICKNGMQSLSRGGAVIYYASV
FLYFWVFSTPVVSLVLGSYLYICVNWLHLHFDEAFSSLRIANYKAFTRFHINHDGDLEVY
TLAVDKVPKEWELDPDWDGELKQPQQLSHLRRFPSKWRAASAHQDPLNTVKIIDHFVIQQ
TEKPDLGASNRSVTC

High Scoring Gene Products

Symbol, full name Information P value
AT4G23000 protein from Arabidopsis thaliana 0.

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  003788
        (795 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2127148 - symbol:AT4G23000 "AT4G23000" species...  3386  0.        1


>TAIR|locus:2127148 [details] [associations]
            symbol:AT4G23000 "AT4G23000" species:3702 "Arabidopsis
            thaliana" [GO:0004722 "protein serine/threonine phosphatase
            activity" evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISM]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016036
            "cellular response to phosphate starvation" evidence=RCA]
            [GO:0019375 "galactolipid biosynthetic process" evidence=RCA]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=RCA] InterPro:IPR004843 Pfam:PF00149 EMBL:CP002687
            GO:GO:0016787 IPI:IPI00516675 RefSeq:NP_194031.5 UniGene:At.54483
            ProteinModelPortal:F4JMQ8 PRIDE:F4JMQ8 EnsemblPlants:AT4G23000.1
            GeneID:828399 KEGG:ath:AT4G23000 OMA:WVIYGEL ArrayExpress:F4JMQ8
            Uniprot:F4JMQ8
        Length = 1015

 Score = 3386 (1197.0 bits), Expect = 0., P = 0.
 Identities = 614/792 (77%), Positives = 688/792 (86%)

Query:     1 MNELKDQVCSSWFAPVGSASDYPLLSKWVIYGELGNDNGG---SSDEISPIYSLWATFIG 57
             ++EL+DQVCSSWFAPVGSA DYPLLSKWVIYGEL   NG    SSDEISPIYSLWATFIG
Sbjct:   226 IDELRDQVCSSWFAPVGSARDYPLLSKWVIYGELAC-NGSCPDSSDEISPIYSLWATFIG 284

Query:    58 LYIANYVVERSTGWALTHPLSVEEYEKMKKKQLKPEFLDMVPWYSGTSADLFKTVFDLLV 117
             LYIANYVVERSTGWAL HPLSVE YEK+K++Q+KP FLDMVPWYSGTSADLFKTVFDLLV
Sbjct:   285 LYIANYVVERSTGWALAHPLSVENYEKLKRQQMKPNFLDMVPWYSGTSADLFKTVFDLLV 344

Query:   118 SVTVFVGRFDMRMMQAAMNKDQEGAQHGDLLYDHLSEKEDLWFDFMADTGDGGNSSYSVA 177
             SVTVF+GRFDMRMMQAAMNKD +G +  +LLYDH ++K D WFDFMADTGDGGNSSYSVA
Sbjct:   345 SVTVFLGRFDMRMMQAAMNKDCDGNKSKELLYDHFADKTDFWFDFMADTGDGGNSSYSVA 404

Query:   178 RLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPPPWYK 237
             +LLAQP I V  D+   +L RG++LLIGGDLAYPNPSAFTYE+RLF PFEYALQPP WYK
Sbjct:   405 KLLAQPFINVPLDNDSISLERGNILLIGGDLAYPNPSAFTYEKRLFCPFEYALQPPHWYK 464

Query:   238 KDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFMRFICHKSWLGGWFMPQK 297
              D ++VNKPE+P GV +LK YDGPQC++IPGNHDWFDGLNTFMR++CHKSWLGGWFMPQK
Sbjct:   465 TDSISVNKPELPDGVSDLKHYDGPQCFLIPGNHDWFDGLNTFMRYVCHKSWLGGWFMPQK 524

Query:   298 KSYFALQLPKGWWVFGLDLALHCDIDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDW 357
             KSYFALQLPKGWWVFGLDLALH DIDVYQF FF++LVKE+VGE D+VII+THEPNWLLDW
Sbjct:   525 KSYFALQLPKGWWVFGLDLALHGDIDVYQFNFFSKLVKEKVGENDAVIIITHEPNWLLDW 584

Query:   358 YFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGGAFL 417
             Y+ + +GKN++HLI ++LKGRCKLR+AGD+HHYMRHS   SDGPV+V HLLVNGCGGAFL
Sbjct:   585 YWKDDTGKNMRHLIFEFLKGRCKLRMAGDLHHYMRHSCTQSDGPVHVPHLLVNGCGGAFL 644

Query:   418 HPTHVFSNFRKFYGTTYESKAAYPSFEDSSRIALGNILKFRKKNWQFDFIGGIVYFVLVF 477
             HPTHVF  F KFYG +YESK+AYPSFEDSSRIALGNILKFRKKNWQFDFIGGI+YF+LVF
Sbjct:   645 HPTHVFRCFSKFYGASYESKSAYPSFEDSSRIALGNILKFRKKNWQFDFIGGIIYFLLVF 704

Query:   478 SMFPQCELNHILREDSFSGHLRSFFGTVWNAFMYVLEHSYVSFAGALLLLIVAITFVPSK 537
             S+FPQCEL HILR DSFSGHL SFFGTVW++F+YV E SYVSF G L+LLI AI FVPSK
Sbjct:   705 SLFPQCELGHILRGDSFSGHLGSFFGTVWSSFVYVTEQSYVSFTGVLMLLITAIMFVPSK 764

Query:   538 LSRKKRAMIGXXXXXXXXXXXXXXXXXXXXGVETCIQHKLLATSGYHTLYQWYRSVESEH 597
             +SR+KR +IG                    G+E CIQHKLLA SGYHTLYQWY+SVE+EH
Sbjct:   765 ISRRKRLLIGILHVSAHLMAALILMLLLELGIEICIQHKLLANSGYHTLYQWYKSVENEH 824

Query:   598 FPDPTGLRARIEQWTFGLYPACIKYLMSAFDIPEVMAVTRSNICKNGMQSLSRGGAVIYY 657
             FPDPTGLR RIEQWTFGLYPACIKYLMSAFDIPEVMAVTR+NIC+ GM+SLSR GA IYY
Sbjct:   825 FPDPTGLRDRIEQWTFGLYPACIKYLMSAFDIPEVMAVTRTNICREGMESLSRSGAAIYY 884

Query:   658 ASVFLYFWVFSTPVVSLVLGSYLYICVNWLHLHFDEAFSSLRIANYKAFTRFHINHDGDL 717
             ASVFLYFWVFSTPVVSLV GSYLYI +NWLH+HFDEAFSSLRIANYK+FTRFHI  DGDL
Sbjct:   885 ASVFLYFWVFSTPVVSLVFGSYLYISINWLHIHFDEAFSSLRIANYKSFTRFHIKPDGDL 944

Query:   718 EVYTLAVDKVPKEWELDPDWDGELKQPQQLSHLRRFPSKWRAASAHQDPLNTVKIIDHFV 777
             EV+TL VDKVPKEW+LD DWD E +   ++SH RRFPSKW A +  QDP+NTVKI+D FV
Sbjct:   945 EVFTLGVDKVPKEWKLDKDWDAEPRSTVKMSHHRRFPSKWCATTLQQDPVNTVKIVDKFV 1004

Query:   778 IQQTEKPDLGAS 789
             I ++EK + G S
Sbjct:  1005 IHRSEK-ETGGS 1015


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.139   0.454    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      795       775   0.00093  121 3  11 22  0.49    33
                                                     37  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  636 (68 KB)
  Total size of DFA:  485 KB (2223 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:01
  No. of threads or processors used:  24
  Search cpu time:  67.05u 0.08s 67.13t   Elapsed:  00:00:25
  Total cpu time:  67.05u 0.08s 67.13t   Elapsed:  00:00:26
  Start:  Thu May  9 18:01:19 2013   End:  Thu May  9 18:01:45 2013

Back to top