Query 003791
Match_columns 795
No_of_seqs 283 out of 1128
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 04:09:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003791.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003791hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3q7m_A Lipoprotein YFGL, BAMB; 99.8 6E-16 2.1E-20 169.9 33.0 216 25-258 24-261 (376)
2 3q7m_A Lipoprotein YFGL, BAMB; 99.7 2.4E-15 8.1E-20 165.1 23.8 218 24-258 68-299 (376)
3 1flg_A Protein (quinoprotein e 99.6 1.1E-13 3.8E-18 162.1 25.2 227 28-265 43-364 (582)
4 1kb0_A Quinohemoprotein alcoho 99.6 1.3E-13 4.4E-18 164.4 23.5 225 28-264 54-354 (677)
5 2ad6_A Methanol dehydrogenase 99.6 2.2E-13 7.6E-18 159.2 25.0 226 29-265 40-344 (571)
6 1w6s_A Methanol dehydrogenase 99.6 1.3E-13 4.4E-18 161.8 23.0 219 28-258 39-345 (599)
7 1yiq_A Quinohemoprotein alcoho 99.6 1.4E-13 4.7E-18 164.5 22.7 222 29-258 48-341 (689)
8 1kv9_A Type II quinohemoprotei 99.5 2.2E-13 7.6E-18 162.2 23.1 223 28-258 43-336 (668)
9 2hz6_A Endoplasmic reticulum t 99.5 7E-14 2.4E-18 154.4 10.4 185 48-257 4-194 (369)
10 1flg_A Protein (quinoprotein e 99.4 2.8E-11 9.6E-16 141.7 29.8 192 25-221 84-365 (582)
11 1kb0_A Quinohemoprotein alcoho 99.4 1.6E-11 5.5E-16 146.3 28.1 189 26-219 94-354 (677)
12 3no2_A Uncharacterized protein 99.4 1.5E-11 5.2E-16 130.2 23.0 181 22-219 18-203 (276)
13 1kv9_A Type II quinohemoprotei 99.4 4E-11 1.4E-15 142.7 28.3 187 26-217 83-339 (668)
14 1w6s_A Methanol dehydrogenase 99.4 7.9E-12 2.7E-16 146.6 21.3 190 27-220 82-351 (599)
15 3no2_A Uncharacterized protein 99.4 4.6E-11 1.6E-15 126.5 24.0 192 53-264 5-203 (276)
16 2ad6_A Methanol dehydrogenase 99.4 1.8E-11 6.2E-16 143.0 22.6 190 27-220 82-344 (571)
17 2hz6_A Endoplasmic reticulum t 99.3 4.4E-13 1.5E-17 148.0 4.3 172 24-221 24-202 (369)
18 1yiq_A Quinohemoprotein alcoho 99.3 4.2E-11 1.4E-15 143.0 21.4 188 26-220 87-347 (689)
19 2be1_A Serine/threonine-protei 99.3 1.9E-11 6.5E-16 133.0 15.5 162 53-222 10-193 (339)
20 3vgz_A Uncharacterized protein 99.2 5.8E-08 2E-12 103.6 33.8 223 31-265 33-271 (353)
21 2be1_A Serine/threonine-protei 99.0 4.4E-10 1.5E-14 122.3 10.9 189 26-221 27-242 (339)
22 3hxj_A Pyrrolo-quinoline quino 99.0 6.6E-09 2.2E-13 110.4 19.4 202 26-257 84-285 (330)
23 3hxj_A Pyrrolo-quinoline quino 99.0 4.3E-08 1.5E-12 104.0 22.0 196 29-254 126-323 (330)
24 3vgz_A Uncharacterized protein 98.9 1.1E-06 3.9E-11 93.4 31.4 192 52-257 99-305 (353)
25 3dsm_A Uncharacterized protein 98.7 2.1E-06 7.3E-11 92.3 25.7 171 23-215 68-257 (328)
26 3dsm_A Uncharacterized protein 98.6 7.4E-06 2.5E-10 88.1 25.3 189 53-257 53-255 (328)
27 1l0q_A Surface layer protein; 98.6 0.00011 3.9E-09 79.3 33.7 214 22-257 15-235 (391)
28 1l0q_A Surface layer protein; 98.6 0.00018 6.1E-09 77.8 35.3 183 56-257 5-191 (391)
29 1nir_A Nitrite reductase; hemo 98.5 0.00045 1.5E-08 79.8 37.4 191 53-257 148-357 (543)
30 3bws_A Protein LP49; two-domai 98.4 0.00045 1.5E-08 75.7 34.6 180 64-257 102-294 (433)
31 2ovr_B FBW7, F-BOX/WD repeat p 98.4 0.00077 2.6E-08 74.6 35.5 182 52-257 128-310 (445)
32 1pby_B Quinohemoprotein amine 98.3 0.00017 5.8E-09 75.6 27.2 139 22-172 14-172 (337)
33 2iwa_A Glutamine cyclotransfer 98.3 0.00025 8.4E-09 74.4 26.2 187 53-256 31-238 (266)
34 1pby_B Quinohemoprotein amine 98.2 0.00085 2.9E-08 70.1 29.3 150 55-219 3-171 (337)
35 3bws_A Protein LP49; two-domai 98.2 0.0022 7.5E-08 70.2 33.5 192 53-257 133-336 (433)
36 1r5m_A SIR4-interacting protei 98.2 0.0022 7.4E-08 69.2 32.5 190 52-257 56-280 (425)
37 3ow8_A WD repeat-containing pr 98.2 0.0055 1.9E-07 65.0 34.6 189 53-257 48-239 (321)
38 1nir_A Nitrite reductase; hemo 98.2 0.0026 8.8E-08 73.4 33.8 196 50-255 187-402 (543)
39 3v7d_B Cell division control p 98.1 0.0066 2.2E-07 67.2 34.9 189 52-257 131-343 (464)
40 2ovr_B FBW7, F-BOX/WD repeat p 98.1 0.0036 1.2E-07 69.2 32.3 182 53-257 209-393 (445)
41 1gxr_A ESG1, transducin-like e 98.1 0.0021 7E-08 67.0 28.6 188 52-257 108-298 (337)
42 1qks_A Cytochrome CD1 nitrite 98.1 0.0038 1.3E-07 72.4 32.9 202 53-265 166-382 (567)
43 3u4y_A Uncharacterized protein 98.0 0.019 6.5E-07 60.0 35.2 192 53-257 9-209 (331)
44 4ery_A WD repeat-containing pr 98.0 0.013 4.5E-07 61.0 33.6 190 52-257 34-225 (312)
45 3nok_A Glutaminyl cyclase; bet 98.0 0.00055 1.9E-08 71.4 21.8 151 53-221 64-220 (268)
46 4aez_A CDC20, WD repeat-contai 98.0 0.0097 3.3E-07 64.8 32.9 188 53-257 103-295 (401)
47 1jmx_B Amine dehydrogenase; ox 98.0 0.0012 4E-08 69.6 24.6 138 23-173 25-185 (349)
48 1qks_A Cytochrome CD1 nitrite 98.0 0.024 8.3E-07 65.7 37.1 221 22-255 180-421 (567)
49 3vl1_A 26S proteasome regulato 97.9 0.0071 2.4E-07 65.6 30.4 189 53-257 68-280 (420)
50 3u4y_A Uncharacterized protein 97.9 0.01 3.5E-07 62.1 30.7 217 22-257 23-254 (331)
51 3ow8_A WD repeat-containing pr 97.9 0.0069 2.4E-07 64.3 29.5 189 52-257 91-281 (321)
52 3zwl_B Eukaryotic translation 97.9 0.027 9.3E-07 59.1 33.8 190 52-257 43-251 (369)
53 3mbr_X Glutamine cyclotransfer 97.9 0.0056 1.9E-07 63.1 26.5 153 53-221 30-189 (243)
54 3nol_A Glutamine cyclotransfer 97.9 0.0029 9.9E-08 65.9 24.2 153 53-221 52-211 (262)
55 2ynn_A Coatomer subunit beta'; 97.9 0.014 4.7E-07 61.1 30.1 199 41-257 16-219 (304)
56 1p22_A F-BOX/WD-repeat protein 97.9 0.0068 2.3E-07 66.9 28.6 184 52-257 142-327 (435)
57 3mkq_A Coatomer beta'-subunit; 97.8 0.016 5.3E-07 69.0 33.7 192 52-257 24-219 (814)
58 4gqb_B Methylosome protein 50; 97.8 0.00068 2.3E-08 73.3 19.7 192 53-257 93-291 (344)
59 1gxr_A ESG1, transducin-like e 97.8 0.0042 1.4E-07 64.6 25.3 182 52-253 152-335 (337)
60 1q7f_A NHL, brain tumor CG1071 97.8 0.017 6E-07 59.3 29.7 151 53-218 40-200 (286)
61 3v7d_B Cell division control p 97.8 0.023 7.7E-07 62.8 32.5 185 52-257 216-423 (464)
62 4ery_A WD repeat-containing pr 97.8 0.0056 1.9E-07 63.9 25.5 192 52-257 76-270 (312)
63 1r5m_A SIR4-interacting protei 97.8 0.0056 1.9E-07 65.9 26.2 187 52-257 119-321 (425)
64 3sjl_D Methylamine dehydrogena 97.8 0.068 2.3E-06 58.8 34.8 188 49-257 40-258 (386)
65 2aq5_A Coronin-1A; WD40 repeat 97.8 0.004 1.4E-07 67.8 24.8 196 52-257 93-301 (402)
66 3zwl_B Eukaryotic translation 97.8 0.02 6.7E-07 60.2 29.5 157 52-219 85-257 (369)
67 3hfq_A Uncharacterized protein 97.7 0.064 2.2E-06 56.6 34.7 189 55-255 4-218 (347)
68 3c75_H MADH, methylamine dehyd 97.7 0.048 1.6E-06 60.9 33.3 189 49-257 80-297 (426)
69 1sq9_A Antiviral protein SKI8; 97.7 0.0032 1.1E-07 67.7 22.8 155 51-219 135-330 (397)
70 4aez_A CDC20, WD repeat-contai 97.7 0.017 6E-07 62.8 28.9 190 53-257 186-382 (401)
71 3vl1_A 26S proteasome regulato 97.7 0.006 2.1E-07 66.2 24.6 193 52-257 108-324 (420)
72 1q7f_A NHL, brain tumor CG1071 97.7 0.031 1.1E-06 57.4 28.4 154 52-219 87-245 (286)
73 3sfz_A APAF-1, apoptotic pepti 97.7 0.051 1.8E-06 68.2 35.6 156 51-219 625-782 (1249)
74 1jmx_B Amine dehydrogenase; ox 97.6 0.0043 1.5E-07 65.2 21.4 151 53-219 10-183 (349)
75 3fvz_A Peptidyl-glycine alpha- 97.6 0.069 2.3E-06 56.6 31.0 150 64-219 70-235 (329)
76 1vyh_C Platelet-activating fac 97.6 0.083 2.8E-06 57.8 32.4 153 52-218 119-272 (410)
77 4a11_B DNA excision repair pro 97.6 0.035 1.2E-06 59.3 28.3 195 52-257 55-278 (408)
78 2iwa_A Glutamine cyclotransfer 97.6 0.0054 1.9E-07 64.1 20.8 154 95-266 30-191 (266)
79 1got_B GT-beta; complex (GTP-b 97.6 0.12 4.1E-06 54.7 34.3 189 52-257 66-259 (340)
80 1pgu_A Actin interacting prote 97.6 0.19 6.5E-06 57.0 37.7 115 53-172 219-337 (615)
81 1erj_A Transcriptional repress 97.5 0.12 4.1E-06 56.0 32.4 191 52-257 75-289 (393)
82 1got_B GT-beta; complex (GTP-b 97.5 0.04 1.4E-06 58.5 27.5 189 52-257 108-303 (340)
83 1p22_A F-BOX/WD-repeat protein 97.5 0.031 1.1E-06 61.4 26.7 185 52-257 182-367 (435)
84 1sq9_A Antiviral protein SKI8; 97.4 0.036 1.2E-06 59.3 26.2 197 54-264 82-330 (397)
85 2mad_H Methylamine dehydrogena 97.4 0.14 4.7E-06 55.9 30.8 147 50-213 74-245 (373)
86 4g56_B MGC81050 protein; prote 97.4 0.0036 1.2E-07 67.6 17.8 193 53-257 105-303 (357)
87 3i2n_A WD repeat-containing pr 97.4 0.067 2.3E-06 55.9 27.4 196 53-257 30-245 (357)
88 3sjl_D Methylamine dehydrogena 97.4 0.032 1.1E-06 61.4 25.0 151 50-214 86-259 (386)
89 2mad_H Methylamine dehydrogena 97.4 0.24 8.2E-06 53.9 36.6 185 51-257 30-245 (373)
90 3c75_H MADH, methylamine dehyd 97.4 0.043 1.5E-06 61.3 26.3 231 23-263 103-409 (426)
91 3sfz_A APAF-1, apoptotic pepti 97.4 0.079 2.7E-06 66.5 31.8 155 95-265 626-783 (1249)
92 3mbr_X Glutamine cyclotransfer 97.4 0.024 8.3E-07 58.3 22.2 156 95-269 29-192 (243)
93 3k26_A Polycomb protein EED; W 97.4 0.071 2.4E-06 55.9 26.8 154 53-216 34-197 (366)
94 3nok_A Glutaminyl cyclase; bet 97.4 0.0099 3.4E-07 61.9 19.2 154 95-268 63-222 (268)
95 3odt_A Protein DOA1; ubiquitin 97.3 0.037 1.3E-06 56.7 23.9 182 53-257 114-298 (313)
96 2pbi_B Guanine nucleotide-bind 97.3 0.14 4.7E-06 54.8 29.1 191 52-257 75-317 (354)
97 3odt_A Protein DOA1; ubiquitin 97.3 0.01 3.5E-07 61.0 19.4 150 52-219 154-304 (313)
98 3mkq_A Coatomer beta'-subunit; 97.3 0.21 7E-06 59.2 33.3 148 95-257 24-174 (814)
99 3i2n_A WD repeat-containing pr 97.3 0.054 1.9E-06 56.7 25.1 195 53-257 80-293 (357)
100 1ri6_A Putative isomerase YBHE 97.3 0.23 8E-06 51.3 34.7 189 53-255 4-209 (343)
101 2z2n_A Virginiamycin B lyase; 97.2 0.19 6.6E-06 51.1 27.5 183 53-257 25-214 (299)
102 3nol_A Glutamine cyclotransfer 97.2 0.023 7.8E-07 59.1 20.1 154 96-269 52-214 (262)
103 2aq5_A Coronin-1A; WD40 repeat 97.2 0.054 1.8E-06 58.7 24.1 187 59-257 53-256 (402)
104 2ynn_A Coatomer subunit beta'; 97.2 0.29 1E-05 50.8 30.0 147 96-257 25-174 (304)
105 3mmy_A MRNA export factor; mRN 97.1 0.034 1.1E-06 58.4 21.3 187 52-257 97-306 (368)
106 2qc5_A Streptogramin B lactona 97.1 0.29 9.8E-06 49.8 28.1 183 53-257 30-219 (300)
107 3jrp_A Fusion protein of prote 97.1 0.12 4.3E-06 54.2 25.6 192 52-257 22-242 (379)
108 3hx6_A Type 4 fimbrial biogene 97.1 0.018 6.3E-07 65.8 19.4 154 54-215 86-288 (570)
109 3gre_A Serine/threonine-protei 97.1 0.04 1.4E-06 60.2 21.7 158 52-218 181-366 (437)
110 3hfq_A Uncharacterized protein 97.1 0.4 1.4E-05 50.3 31.9 196 53-254 50-270 (347)
111 2z2n_A Virginiamycin B lyase; 97.1 0.098 3.3E-06 53.3 23.4 182 53-257 109-297 (299)
112 3gre_A Serine/threonine-protei 97.1 0.5 1.7E-05 51.3 33.2 200 52-257 75-294 (437)
113 4g56_B MGC81050 protein; prote 97.1 0.019 6.6E-07 61.8 18.6 195 51-257 52-260 (357)
114 3k26_A Polycomb protein EED; W 97.0 0.04 1.4E-06 57.8 20.7 106 54-167 86-196 (366)
115 2pbi_B Guanine nucleotide-bind 97.0 0.054 1.9E-06 58.0 22.0 155 52-218 165-322 (354)
116 2oiz_A Aromatic amine dehydrog 97.0 0.45 1.5E-05 51.2 29.4 112 52-169 14-146 (361)
117 4gqb_B Methylosome protein 50; 97.0 0.025 8.7E-07 60.8 18.8 153 51-215 137-293 (344)
118 4aow_A Guanine nucleotide-bind 97.0 0.19 6.4E-06 52.1 25.1 188 52-257 139-339 (340)
119 3lrv_A PRE-mRNA-splicing facto 97.0 0.42 1.4E-05 50.4 28.1 188 54-256 95-293 (343)
120 1k8k_C P40, ARP2/3 complex 41 97.0 0.22 7.7E-06 52.3 25.8 193 52-257 19-235 (372)
121 1k8k_C P40, ARP2/3 complex 41 96.9 0.2 6.7E-06 52.7 25.2 190 52-255 63-274 (372)
122 3frx_A Guanine nucleotide-bind 96.9 0.41 1.4E-05 50.1 27.4 192 51-257 75-269 (319)
123 2oiz_A Aromatic amine dehydrog 96.9 0.16 5.5E-06 54.8 24.4 72 50-121 58-146 (361)
124 4a11_B DNA excision repair pro 96.9 0.068 2.3E-06 57.0 21.2 195 53-257 156-367 (408)
125 3mmy_A MRNA export factor; mRN 96.9 0.13 4.3E-06 53.8 22.8 185 54-256 55-248 (368)
126 1erj_A Transcriptional repress 96.8 0.13 4.4E-06 55.8 23.0 151 52-214 134-290 (393)
127 1vyh_C Platelet-activating fac 96.8 0.16 5.4E-06 55.5 23.7 189 52-257 161-371 (410)
128 2vdu_B TRNA (guanine-N(7)-)-me 96.8 0.31 1.1E-05 53.7 26.2 153 98-265 117-280 (450)
129 3lrv_A PRE-mRNA-splicing facto 96.8 0.098 3.4E-06 55.4 21.3 157 52-218 138-299 (343)
130 2qc5_A Streptogramin B lactona 96.8 0.2 7E-06 50.9 23.0 183 53-257 72-261 (300)
131 4gga_A P55CDC, cell division c 96.8 0.88 3E-05 49.4 31.8 146 56-216 118-266 (420)
132 2vdu_B TRNA (guanine-N(7)-)-me 96.7 0.12 4.1E-06 57.0 22.2 155 52-220 113-280 (450)
133 1yfq_A Cell cycle arrest prote 96.7 0.051 1.7E-06 56.7 18.0 186 52-257 67-284 (342)
134 3fvz_A Peptidyl-glycine alpha- 96.7 0.79 2.7E-05 48.2 27.9 162 53-218 101-284 (329)
135 1pgu_A Actin interacting prote 96.7 0.12 4.1E-06 58.7 22.1 189 52-257 127-330 (615)
136 4h5i_A Guanine nucleotide-exch 96.7 0.41 1.4E-05 51.4 25.3 152 95-257 145-302 (365)
137 4aow_A Guanine nucleotide-bind 96.7 0.067 2.3E-06 55.6 18.5 146 54-213 186-339 (340)
138 3ei3_B DNA damage-binding prot 96.6 0.26 9E-06 52.5 23.5 188 54-257 87-284 (383)
139 4ggc_A P55CDC, cell division c 96.6 0.77 2.6E-05 46.8 32.1 146 96-257 36-183 (318)
140 1rwi_B Serine/threonine-protei 96.6 0.11 3.7E-06 52.4 18.8 184 53-256 34-223 (270)
141 1ri6_A Putative isomerase YBHE 96.5 0.95 3.3E-05 46.6 35.0 191 52-254 48-261 (343)
142 1pjx_A Dfpase, DIISOPROPYLFLUO 96.5 0.17 5.9E-06 52.1 20.1 148 53-214 28-211 (314)
143 3hx6_A Type 4 fimbrial biogene 96.4 0.058 2E-06 61.6 17.0 155 96-257 85-286 (570)
144 3iz6_a 40S ribosomal protein R 96.4 0.22 7.5E-06 53.7 21.1 190 53-256 170-376 (380)
145 1yfq_A Cell cycle arrest prote 96.4 0.55 1.9E-05 48.6 23.6 183 52-256 22-226 (342)
146 2pm9_A Protein WEB1, protein t 96.4 0.07 2.4E-06 57.4 16.7 198 52-257 78-296 (416)
147 2hqs_A Protein TOLB; TOLB, PAL 96.3 0.36 1.2E-05 53.0 22.4 189 51-257 188-389 (415)
148 1rwi_B Serine/threonine-protei 96.2 0.15 5.1E-06 51.4 17.4 145 53-213 77-224 (270)
149 3jrp_A Fusion protein of prote 96.2 0.38 1.3E-05 50.4 21.2 200 53-257 69-289 (379)
150 3vu4_A KMHSV2; beta-propeller 96.2 0.4 1.4E-05 51.2 21.6 72 52-127 30-102 (355)
151 4asc_A Kelch repeat and BTB do 96.2 1.1 3.7E-05 46.9 24.3 173 52-240 44-249 (315)
152 3e5z_A Putative gluconolactona 96.1 1.3 4.5E-05 45.3 24.6 144 55-214 42-206 (296)
153 3ei3_B DNA damage-binding prot 96.1 1.7 5.9E-05 46.0 29.0 151 53-219 131-290 (383)
154 3f3f_A Nucleoporin SEH1; struc 96.1 1.5 5.3E-05 44.6 27.7 110 52-167 22-147 (351)
155 3dw8_B Serine/threonine-protei 96.0 0.42 1.4E-05 51.8 21.0 68 52-119 39-130 (447)
156 2pm9_A Protein WEB1, protein t 96.0 0.11 3.7E-06 55.9 16.0 190 53-257 126-339 (416)
157 1nr0_A Actin interacting prote 96.0 3.1 0.00011 47.8 37.9 110 52-167 201-317 (611)
158 3dm0_A Maltose-binding peripla 96.0 2.4 8.3E-05 49.4 28.7 192 51-257 440-634 (694)
159 1jof_A Carboxy-CIS,CIS-muconat 95.9 1.8 6.1E-05 46.0 25.2 157 51-215 49-230 (365)
160 3g4e_A Regucalcin; six bladed 95.9 1.3 4.5E-05 45.7 23.2 148 53-216 24-187 (297)
161 2xyi_A Probable histone-bindin 95.8 0.96 3.3E-05 49.4 23.1 186 54-255 142-353 (430)
162 3dm0_A Maltose-binding peripla 95.8 1.5 5E-05 51.3 25.7 190 53-257 395-594 (694)
163 2fp8_A Strictosidine synthase; 95.8 1 3.5E-05 47.1 22.1 184 53-255 91-313 (322)
164 3frx_A Guanine nucleotide-bind 95.8 1.7 5.9E-05 45.2 23.7 186 52-256 118-318 (319)
165 4gga_A P55CDC, cell division c 95.7 3 0.0001 45.1 28.3 191 52-257 158-355 (420)
166 2ecf_A Dipeptidyl peptidase IV 95.7 4.6 0.00016 47.1 29.4 108 51-168 46-186 (741)
167 3f3f_A Nucleoporin SEH1; struc 95.6 1 3.5E-05 46.0 21.0 71 53-123 71-151 (351)
168 4h5i_A Guanine nucleotide-exch 95.6 0.97 3.3E-05 48.4 21.6 71 51-124 143-215 (365)
169 2p4o_A Hypothetical protein; p 95.6 2.3 7.9E-05 44.2 23.9 146 53-214 42-202 (306)
170 4e54_B DNA damage-binding prot 95.6 0.63 2.1E-05 51.0 20.3 192 53-257 132-329 (435)
171 2oaj_A Protein SNI1; WD40 repe 95.5 0.97 3.3E-05 55.1 23.2 195 43-257 22-244 (902)
172 3jro_A Fusion protein of prote 95.5 0.43 1.5E-05 56.8 19.6 192 52-257 20-240 (753)
173 3scy_A Hypothetical bacterial 95.4 3.1 0.00011 43.7 38.7 194 55-257 15-244 (361)
174 3hrp_A Uncharacterized protein 95.3 3.6 0.00012 45.0 25.3 149 53-213 141-299 (409)
175 1pjx_A Dfpase, DIISOPROPYLFLUO 95.3 3 0.0001 42.5 25.0 187 54-255 83-299 (314)
176 2xzm_R RACK1; ribosome, transl 95.2 2.2 7.4E-05 44.8 22.2 104 52-162 38-148 (343)
177 4asc_A Kelch repeat and BTB do 95.2 1.4 4.9E-05 45.9 20.5 185 55-257 6-223 (315)
178 2vpj_A Kelch-like protein 12; 95.1 3.4 0.00012 42.4 23.8 191 53-257 62-280 (301)
179 3fm0_A Protein CIAO1; WDR39,SG 95.1 1.2 4.2E-05 46.9 20.2 108 52-165 27-138 (345)
180 2dg1_A DRP35, lactonase; beta 95.1 2.8 9.4E-05 43.4 22.4 150 53-216 55-219 (333)
181 3pe7_A Oligogalacturonate lyas 95.0 0.66 2.3E-05 49.2 17.7 152 51-214 45-228 (388)
182 1zgk_A Kelch-like ECH-associat 95.0 2.7 9.1E-05 43.6 22.0 196 46-257 17-242 (308)
183 1mda_H Methylamine dehydrogena 94.9 4 0.00014 44.3 23.7 179 53-257 31-242 (368)
184 2hqs_A Protein TOLB; TOLB, PAL 94.9 2.6 9E-05 45.9 22.6 188 53-257 143-346 (415)
185 3hrp_A Uncharacterized protein 94.9 5.5 0.00019 43.5 26.6 203 52-265 181-408 (409)
186 3ii7_A Kelch-like protein 7; p 94.8 4.2 0.00014 41.9 22.7 189 53-257 11-227 (306)
187 2vpj_A Kelch-like protein 12; 94.8 4.3 0.00015 41.6 24.3 190 53-257 14-233 (301)
188 1mda_H Methylamine dehydrogena 94.8 0.98 3.4E-05 49.1 18.3 66 50-115 73-158 (368)
189 3dwl_C Actin-related protein 2 94.7 0.084 2.9E-06 56.1 9.6 107 52-166 22-134 (377)
190 3pe7_A Oligogalacturonate lyas 94.7 1.8 6E-05 45.8 20.1 198 51-257 90-331 (388)
191 3iz6_a 40S ribosomal protein R 94.7 1.1 3.6E-05 48.2 18.4 118 52-170 217-336 (380)
192 2zux_A YESW protein; beta-prop 94.6 0.68 2.3E-05 52.7 16.7 147 65-219 231-408 (591)
193 2xn4_A Kelch-like protein 2; s 94.6 4.7 0.00016 41.4 22.6 189 53-257 15-231 (302)
194 4gq1_A NUP37; propeller, trans 94.6 5.3 0.00018 42.9 23.8 110 55-170 103-225 (393)
195 3ii7_A Kelch-like protein 7; p 94.6 4.8 0.00016 41.4 24.8 189 53-257 55-274 (306)
196 2ghs_A AGR_C_1268P; regucalcin 94.6 4.9 0.00017 42.0 23.0 145 53-214 60-216 (326)
197 2p9w_A MAL S 1 allergenic prot 94.6 3.4 0.00012 44.2 21.3 149 95-255 23-215 (334)
198 4ggc_A P55CDC, cell division c 94.6 4.5 0.00015 40.9 31.8 148 56-218 38-188 (318)
199 1nr0_A Actin interacting prote 94.6 8.4 0.00029 44.1 28.6 143 99-257 163-315 (611)
200 1fwx_A Nitrous oxide reductase 94.5 2.2 7.4E-05 49.3 20.9 144 51-211 145-361 (595)
201 2ymu_A WD-40 repeat protein; u 94.4 8.1 0.00028 43.1 36.9 182 52-254 273-456 (577)
202 3vu4_A KMHSV2; beta-propeller 94.4 6.2 0.00021 41.7 24.5 143 53-214 110-274 (355)
203 3e5z_A Putative gluconolactona 94.3 1.9 6.4E-05 44.1 18.6 138 62-217 152-292 (296)
204 4a2l_A BT_4663, two-component 94.3 5.3 0.00018 47.5 24.8 151 53-214 367-529 (795)
205 2p9w_A MAL S 1 allergenic prot 94.2 1.8 6.1E-05 46.4 18.2 152 53-210 24-214 (334)
206 3scy_A Hypothetical bacterial 94.2 6.4 0.00022 41.2 35.5 197 51-257 59-295 (361)
207 2xyi_A Probable histone-bindin 93.9 3.7 0.00013 44.7 20.8 175 70-256 114-310 (430)
208 2w18_A PALB2, fancn, partner a 93.9 7.7 0.00026 41.8 22.5 156 53-219 144-322 (356)
209 3v9f_A Two-component system se 93.9 14 0.00046 43.8 29.4 152 53-216 323-483 (781)
210 2woz_A Kelch repeat and BTB do 93.7 7.6 0.00026 40.2 25.0 194 52-263 55-293 (318)
211 3jro_A Fusion protein of prote 93.6 2.7 9.4E-05 49.8 20.5 198 53-256 67-286 (753)
212 2oaj_A Protein SNI1; WD40 repe 93.6 2.8 9.5E-05 51.1 20.8 155 53-217 69-248 (902)
213 2xdw_A Prolyl endopeptidase; a 93.5 3 0.0001 48.8 20.5 194 51-257 134-370 (710)
214 2ecf_A Dipeptidyl peptidase IV 93.5 7.4 0.00025 45.3 23.8 156 51-218 118-328 (741)
215 3dw8_B Serine/threonine-protei 93.4 0.59 2E-05 50.6 13.1 154 53-215 189-377 (447)
216 3tc9_A Hypothetical hydrolase; 93.3 8.3 0.00028 42.5 22.5 150 53-214 149-306 (430)
217 4a2l_A BT_4663, two-component 93.1 2.7 9.3E-05 50.0 19.3 200 53-264 183-393 (795)
218 4e54_B DNA damage-binding prot 93.0 0.78 2.7E-05 50.2 13.4 154 53-218 177-334 (435)
219 2qe8_A Uncharacterized protein 93.0 4.7 0.00016 42.5 19.2 109 53-170 27-160 (343)
220 1jof_A Carboxy-CIS,CIS-muconat 92.9 11 0.00037 39.8 34.4 191 55-257 4-228 (365)
221 4hw6_A Hypothetical protein, I 92.9 6.2 0.00021 43.6 20.7 147 53-214 152-309 (433)
222 2p4o_A Hypothetical protein; p 92.7 10 0.00035 39.1 22.9 150 53-215 82-245 (306)
223 3v9f_A Two-component system se 92.7 2.4 8.1E-05 50.5 18.0 149 53-214 417-571 (781)
224 2z3z_A Dipeptidyl aminopeptida 92.6 4.9 0.00017 46.6 20.3 104 53-168 35-160 (706)
225 3qqz_A Putative uncharacterize 92.5 10 0.00036 38.8 22.3 70 52-123 37-108 (255)
226 2zuy_A YESX protein; beta-prop 92.1 2.4 8.2E-05 48.5 15.8 147 64-219 234-412 (620)
227 2xzm_R RACK1; ribosome, transl 91.9 13 0.00045 38.6 26.3 189 52-257 87-287 (343)
228 2xdw_A Prolyl endopeptidase; a 91.9 6.2 0.00021 46.2 20.1 156 51-213 242-416 (710)
229 1zgk_A Kelch-like ECH-associat 91.8 13 0.00044 38.3 23.0 193 53-263 70-293 (308)
230 2fp8_A Strictosidine synthase; 91.8 7.6 0.00026 40.3 18.8 146 55-212 32-217 (322)
231 1fwx_A Nitrous oxide reductase 91.7 7.3 0.00025 44.9 19.6 182 52-256 100-309 (595)
232 2ojh_A Uncharacterized protein 91.6 11 0.00038 37.0 24.7 102 104-214 20-122 (297)
233 1npe_A Nidogen, entactin; glyc 91.5 12 0.00042 37.4 25.5 192 52-264 46-246 (267)
234 2ymu_A WD-40 repeat protein; u 91.4 21 0.00071 39.7 42.1 108 52-170 191-299 (577)
235 3dwl_C Actin-related protein 2 91.3 1.8 6.1E-05 45.6 13.3 67 52-118 66-134 (377)
236 3dr2_A Exported gluconolactona 91.1 2.4 8.1E-05 43.9 13.8 131 62-209 168-304 (305)
237 3fm0_A Protein CIAO1; WDR39,SG 91.1 4.4 0.00015 42.5 16.1 67 52-118 72-139 (345)
238 3g4e_A Regucalcin; six bladed 91.0 15 0.00052 37.4 26.7 147 95-257 24-184 (297)
239 2woz_A Kelch repeat and BTB do 91.0 16 0.00055 37.7 20.9 187 54-257 16-233 (318)
240 2dg1_A DRP35, lactonase; beta 90.5 11 0.00037 38.7 18.4 147 97-255 57-213 (333)
241 2z3z_A Dipeptidyl aminopeptida 90.4 30 0.001 39.8 33.1 150 54-214 93-296 (706)
242 3dr2_A Exported gluconolactona 90.2 18 0.00062 37.0 20.6 146 53-213 56-226 (305)
243 3azo_A Aminopeptidase; POP fam 89.9 9.6 0.00033 43.7 18.9 151 51-214 139-328 (662)
244 2pm7_B Protein transport prote 89.9 18 0.00063 36.6 25.9 108 52-165 20-134 (297)
245 2ghs_A AGR_C_1268P; regucalcin 89.9 20 0.0007 37.2 22.0 147 53-218 100-266 (326)
246 2ece_A 462AA long hypothetical 89.7 29 0.00098 38.7 29.0 160 53-221 25-247 (462)
247 2qe8_A Uncharacterized protein 89.7 18 0.00061 37.9 19.5 70 53-123 77-161 (343)
248 3elq_A Arylsulfate sulfotransf 89.6 15 0.0005 42.2 19.4 123 96-221 366-550 (571)
249 2uvk_A YJHT; unknown function, 89.5 19 0.00066 37.6 19.6 193 53-257 65-344 (357)
250 1z68_A Fibroblast activation p 89.5 2.3 7.7E-05 49.7 13.2 105 53-167 26-143 (719)
251 3elq_A Arylsulfate sulfotransf 89.3 6.6 0.00023 45.0 16.2 99 22-125 177-302 (571)
252 2xn4_A Kelch-like protein 2; s 89.2 21 0.00072 36.4 23.7 193 53-263 61-282 (302)
253 3c5m_A Oligogalacturonate lyas 89.1 7.8 0.00027 40.6 16.1 157 51-215 90-277 (396)
254 1yr2_A Prolyl oligopeptidase; 88.9 41 0.0014 39.3 24.8 152 51-213 172-352 (741)
255 3sre_A PON1, serum paraoxonase 88.0 28 0.00095 37.4 19.5 74 53-127 60-162 (355)
256 2ojh_A Uncharacterized protein 87.9 21 0.00073 34.9 25.9 140 61-215 20-166 (297)
257 3azo_A Aminopeptidase; POP fam 86.5 30 0.001 39.4 20.2 68 51-118 197-277 (662)
258 1npe_A Nidogen, entactin; glyc 86.5 28 0.00094 34.7 22.2 149 53-219 90-246 (267)
259 2j04_A TAU60, YPL007P, hypothe 85.7 18 0.0006 41.7 17.0 109 51-170 139-262 (588)
260 1xfd_A DIP, dipeptidyl aminope 85.7 16 0.00055 42.1 17.4 109 53-168 27-148 (723)
261 2zwa_A Leucine carboxyl methyl 85.6 49 0.0017 38.7 21.6 195 52-257 396-637 (695)
262 2uvk_A YJHT; unknown function, 85.5 38 0.0013 35.3 23.6 157 53-221 19-236 (357)
263 1xfd_A DIP, dipeptidyl aminope 85.3 44 0.0015 38.4 20.9 65 51-120 70-148 (723)
264 2bkl_A Prolyl endopeptidase; m 85.3 31 0.0011 40.0 19.6 67 51-119 77-160 (695)
265 3o4h_A Acylamino-acid-releasin 84.9 47 0.0016 37.2 20.5 106 143-257 120-229 (582)
266 3c5m_A Oligogalacturonate lyas 84.8 13 0.00043 38.9 14.7 70 51-123 45-119 (396)
267 2j04_B YDR362CP, TAU91; beta p 84.2 60 0.002 36.5 21.0 146 97-257 226-388 (524)
268 2j04_A TAU60, YPL007P, hypothe 84.1 16 0.00056 42.0 15.8 150 50-215 94-258 (588)
269 3o4h_A Acylamino-acid-releasin 83.2 16 0.00054 41.2 15.5 67 51-119 159-231 (582)
270 1xip_A Nucleoporin NUP159; bet 81.8 63 0.0021 35.0 20.0 121 77-224 83-204 (388)
271 3iuj_A Prolyl endopeptidase; h 81.5 85 0.0029 36.3 27.4 106 154-265 259-367 (693)
272 3ott_A Two-component system se 81.3 32 0.0011 40.4 17.7 151 53-215 383-549 (758)
273 3amr_A 3-phytase; beta-propell 81.1 63 0.0022 34.6 24.5 197 53-266 40-274 (355)
274 1yr2_A Prolyl oligopeptidase; 81.1 46 0.0016 38.9 19.0 75 51-125 277-360 (741)
275 4hw6_A Hypothetical protein, I 80.9 70 0.0024 35.0 22.8 199 53-265 192-431 (433)
276 2j04_B YDR362CP, TAU91; beta p 80.5 13 0.00044 42.1 13.3 110 53-171 277-394 (524)
277 2w18_A PALB2, fancn, partner a 80.5 66 0.0023 34.5 25.8 147 104-257 155-316 (356)
278 2ece_A 462AA long hypothetical 80.1 79 0.0027 35.1 30.5 191 52-254 94-351 (462)
279 4gq1_A NUP37; propeller, trans 78.8 60 0.0021 34.4 17.5 70 53-123 156-226 (393)
280 2hes_X YDR267CP; beta-propelle 78.8 62 0.0021 33.2 22.2 65 52-116 69-139 (330)
281 1k32_A Tricorn protease; prote 76.9 97 0.0033 37.8 20.7 148 52-213 307-463 (1045)
282 3bg1_A Protein SEC13 homolog; 76.1 19 0.00064 37.0 12.1 66 52-117 24-92 (316)
283 1k32_A Tricorn protease; prote 76.1 42 0.0015 41.0 17.1 104 53-165 348-463 (1045)
284 3v65_B Low-density lipoprotein 75.5 90 0.0031 33.3 25.9 182 54-254 88-276 (386)
285 3iuj_A Prolyl endopeptidase; h 75.4 63 0.0021 37.5 17.7 74 52-125 244-325 (693)
286 1z68_A Fibroblast activation p 74.2 29 0.001 40.0 14.4 65 51-119 69-143 (719)
287 2ism_A Putative oxidoreductase 73.6 94 0.0032 32.7 23.3 61 53-117 41-116 (352)
288 3sov_A LRP-6, low-density lipo 72.6 94 0.0032 32.3 24.4 187 53-257 46-240 (318)
289 3kya_A Putative phosphatase; s 72.2 1.3E+02 0.0045 33.7 21.6 151 53-214 151-346 (496)
290 1ijq_A LDL receptor, low-densi 72.1 94 0.0032 32.0 29.4 189 53-257 41-240 (316)
291 2bkl_A Prolyl endopeptidase; m 71.2 1.5E+02 0.0052 34.0 23.8 154 51-218 130-312 (695)
292 2oit_A Nucleoporin 214KDA; NH2 71.0 1.2E+02 0.0041 32.8 17.7 113 95-217 103-228 (434)
293 1n7d_A LDL receptor, low-densi 70.6 42 0.0014 39.4 14.5 187 53-257 417-616 (699)
294 3m0c_C LDL receptor, low-densi 70.3 1.8E+02 0.0062 34.6 26.8 183 55-254 397-588 (791)
295 3m0c_C LDL receptor, low-densi 69.3 1.9E+02 0.0065 34.4 29.9 190 53-257 435-634 (791)
296 3amr_A 3-phytase; beta-propell 68.1 95 0.0032 33.3 15.3 104 55-162 145-262 (355)
297 2pm7_B Protein transport prote 68.1 1E+02 0.0035 30.8 22.5 65 53-117 67-134 (297)
298 3ott_A Two-component system se 67.4 83 0.0028 36.8 16.3 180 18-215 22-224 (758)
299 2zux_A YESW protein; beta-prop 65.9 68 0.0023 36.6 14.0 108 63-174 151-314 (591)
300 2oit_A Nucleoporin 214KDA; NH2 65.8 1.5E+02 0.0052 32.0 22.4 112 52-171 103-230 (434)
301 3sov_A LRP-6, low-density lipo 64.8 1.3E+02 0.0046 31.0 25.2 183 55-254 6-196 (318)
302 3v65_B Low-density lipoprotein 63.9 1.5E+02 0.0053 31.4 26.1 185 53-257 127-320 (386)
303 3s94_A LRP-6, low-density lipo 63.5 2.1E+02 0.0072 32.8 20.6 182 57-254 12-201 (619)
304 3a9g_A Putative uncharacterize 63.3 1.5E+02 0.0052 31.1 17.7 60 53-116 39-115 (354)
305 1k3i_A Galactose oxidase precu 63.2 54 0.0019 37.8 13.4 142 65-218 168-328 (656)
306 3p5b_L Low density lipoprotein 62.6 1.7E+02 0.0057 31.4 29.2 190 53-257 123-322 (400)
307 2gop_A Trilobed protease; beta 61.7 1.4E+02 0.0048 30.2 19.6 66 51-119 68-165 (347)
308 1k3i_A Galactose oxidase precu 60.7 1.5E+02 0.0051 34.0 16.6 67 53-123 253-329 (656)
309 2hes_X YDR267CP; beta-propelle 60.1 1.5E+02 0.0052 30.1 32.5 62 54-115 25-89 (330)
310 4a0p_A LRP6, LRP-6, low-densit 58.3 2.6E+02 0.0088 32.1 26.7 143 55-210 8-154 (628)
311 3p5b_L Low density lipoprotein 57.6 2E+02 0.0069 30.7 27.4 184 55-255 85-277 (400)
312 1n7d_A LDL receptor, low-densi 55.8 40 0.0014 39.5 10.6 150 53-218 464-621 (699)
313 3kya_A Putative phosphatase; s 55.4 2.6E+02 0.0088 31.3 21.8 62 53-114 204-277 (496)
314 2zwa_A Leucine carboxyl methyl 52.8 3.2E+02 0.011 31.6 17.9 155 94-257 396-579 (695)
315 2zuy_A YESX protein; beta-prop 52.6 1.5E+02 0.0052 33.9 13.9 108 63-174 155-318 (620)
316 3v64_C Agrin; beta propeller, 52.2 2.2E+02 0.0077 29.6 27.4 183 53-254 44-233 (349)
317 3tc9_A Hypothetical hydrolase; 50.0 2.7E+02 0.0094 30.0 25.2 198 53-265 190-428 (430)
318 3sd2_A Putative member of DUF3 47.5 24 0.00083 30.7 5.0 39 703-754 30-68 (101)
319 4a5s_A Dipeptidyl peptidase 4 47.0 3.8E+02 0.013 30.8 20.3 65 50-119 70-145 (740)
320 1tl2_A L10, protein (tachylect 42.5 32 0.0011 34.6 5.7 104 53-173 51-162 (236)
321 2xe4_A Oligopeptidase B; hydro 42.2 4.7E+02 0.016 30.4 18.5 137 64-212 202-355 (751)
322 4a5s_A Dipeptidyl peptidase 4 42.0 4.5E+02 0.015 30.2 25.8 102 53-166 27-144 (740)
323 3v64_C Agrin; beta propeller, 41.1 3.3E+02 0.011 28.3 26.8 185 53-257 84-277 (349)
324 3mez_B Mannose-specific lectin 39.5 1.5E+02 0.005 25.8 9.2 60 54-124 25-84 (113)
325 2xzh_A Clathrin heavy chain 1; 38.7 1.3E+02 0.0044 32.2 9.9 63 52-115 270-332 (365)
326 4h3o_A Lectin; cadmium, plant 38.7 1.5E+02 0.0051 25.4 9.0 57 57-125 23-79 (105)
327 1xd5_A Gastrodianin-1, antifun 38.6 1.9E+02 0.0065 24.9 9.9 52 59-124 25-76 (112)
328 3d33_A Domain of unknown funct 37.1 54 0.0019 28.9 5.7 41 702-754 32-72 (108)
329 3mez_B Mannose-specific lectin 37.0 91 0.0031 27.2 7.4 63 93-172 22-84 (113)
330 1ijq_A LDL receptor, low-densi 37.0 3.5E+02 0.012 27.5 27.2 181 56-254 4-194 (316)
331 3bg1_A Protein SEC13 homolog; 36.4 1.8E+02 0.0062 29.3 10.9 63 98-165 27-92 (316)
332 3a0c_A Mannose/sialic acid-bin 34.3 79 0.0027 27.5 6.5 59 94-171 19-77 (110)
333 3a0c_A Mannose/sialic acid-bin 33.0 2.3E+02 0.008 24.3 9.4 56 57-125 24-79 (110)
334 4h3o_A Lectin; cadmium, plant 32.1 2.4E+02 0.0082 24.1 9.4 62 93-172 17-78 (105)
335 3s94_A LRP-6, low-density lipo 30.7 6.4E+02 0.022 28.6 24.8 186 52-257 50-245 (619)
336 1bpo_A Protein (clathrin); cla 30.6 1.9E+02 0.0064 32.2 9.9 63 51-114 268-330 (494)
337 1tl2_A L10, protein (tachylect 26.8 4.2E+02 0.014 26.5 10.9 29 143-171 96-125 (236)
338 3ei3_A DNA damage-binding prot 26.0 1E+03 0.035 29.4 21.5 159 53-219 483-646 (1158)
339 2xbg_A YCF48-like protein; pho 25.7 5.4E+02 0.018 26.1 17.1 164 22-198 57-225 (327)
340 4a0p_A LRP6, LRP-6, low-densit 23.7 8.4E+02 0.029 27.7 26.7 185 52-257 47-239 (628)
341 3q6k_A 43.2 kDa salivary prote 22.2 1.7E+02 0.0057 31.6 7.6 55 203-257 124-192 (381)
342 1xd5_A Gastrodianin-1, antifun 22.2 2.1E+02 0.0073 24.5 7.1 57 94-171 18-75 (112)
343 1xip_A Nucleoporin NUP159; bet 21.3 7.6E+02 0.026 26.3 19.5 98 53-166 97-194 (388)
344 2jxw_A WW domain-binding prote 20.7 90 0.0031 25.3 3.9 64 58-123 10-73 (75)
345 3dzw_A Agglutinin; lectin, man 20.1 3.9E+02 0.013 22.7 8.4 59 94-172 18-77 (109)
No 1
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.76 E-value=6e-16 Score=169.85 Aligned_cols=216 Identities=17% Similarity=0.296 Sum_probs=147.7
Q ss_pred eccccceeEEEeccCceeee-eeeeeccCCCEEEEEeCCCEEEEEECcCCccceEEEcCCc--------ceeeeeeeeeC
Q 003791 25 EDQVGLMDWHQQYIGKVKHA-VFHTQKTGRKRVVVSTEENVIASLDLRHGEIFWRHVLGIN--------DVVDGIDIALG 95 (795)
Q Consensus 25 edq~G~~dW~~~~vG~~~~~-~f~~~~~~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~--------~~i~~l~~~~g 95 (795)
.+..++..|+.++-+..... ....|...+++||+++.++.|+|+|++||+++|++.+... ..+... +...
T Consensus 24 ~~~~~~~~W~~~~~~~~~~~~~~~~p~v~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~ 102 (376)
T 3q7m_A 24 NQFTPTTAWSTSVGSGIGNFYSNLHPALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVS 102 (376)
T ss_dssp CSSCCEEEEEECCTTTTTTSCCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEE
T ss_pred CCCcceEEeEEecCCCccccceeeccEEECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccC-ceEe
Confidence 34567899999873221111 1124555689999999999999999999999999998642 112222 3455
Q ss_pred CEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccCCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEeccC
Q 003791 96 KYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAA 174 (795)
Q Consensus 96 ~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~ 174 (795)
++.+++++.++.|+++|+.||+++|+..+..... ..+.+ . ++.|++. .++.|+++|++||+++|++..+.
T Consensus 103 ~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~--~~p~~------~-~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~ 173 (376)
T 3q7m_A 103 GGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEAL--SRPVV------S-DGLVLIHTSNGQLQALNEADGAVKWTVNLDM 173 (376)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECSSCCC--SCCEE------E-TTEEEEECTTSEEEEEETTTCCEEEEEECCC
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceE--cCCEE------E-CCEEEEEcCCCeEEEEECCCCcEEEEEeCCC
Confidence 6677777666799999999999999999876543 11222 2 5677776 48999999999999999998765
Q ss_pred cceee---eeEEEEecCCEEEEEEecCCceeEEEEEEcCCCceeeeeeeeccCC---------cccceEEecCcEEEEEE
Q 003791 175 ESVEV---QQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHETAAFSGG---------FVGDVALVSSDTLVTLD 242 (795)
Q Consensus 175 ~~~~~---~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~tG~~~w~~~v~~~~~---------~~~~~~~vg~~~lv~~d 242 (795)
+.... ... ...++.+|+.+..| .++++|+.||+.+|+.....+.+ +...+++.+ +.+++..
T Consensus 174 ~~~~~~~~~~~--~~~~~~v~~g~~~g----~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~v~~~~ 246 (376)
T 3q7m_A 174 PSLSLRGESAP--TTAFGAAVVGGDNG----RVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVN-GVVFALA 246 (376)
T ss_dssp -----CCCCCC--EEETTEEEECCTTT----EEEEEETTTCCEEEEEECCC-----------CCCCCCEEET-TEEEEEC
T ss_pred CceeecCCCCc--EEECCEEEEEcCCC----EEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEEC-CEEEEEe
Confidence 43200 111 23578888744344 79999999999999997655432 233444444 4443333
Q ss_pred CCCCeEEEEEeecCee
Q 003791 243 TTRSILVTVSFKNRKI 258 (795)
Q Consensus 243 ~~~~~L~v~~l~sg~~ 258 (795)
..+.++++|..+|+.
T Consensus 247 -~~g~l~~~d~~tG~~ 261 (376)
T 3q7m_A 247 -YNGNLTALDLRSGQI 261 (376)
T ss_dssp -TTSCEEEEETTTCCE
T ss_pred -cCcEEEEEECCCCcE
Confidence 467899999998873
No 2
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.68 E-value=2.4e-15 Score=165.07 Aligned_cols=218 Identities=13% Similarity=0.231 Sum_probs=145.9
Q ss_pred eeccccceeEEEeccCce------eeeeeeeeccCCCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCE
Q 003791 24 YEDQVGLMDWHQQYIGKV------KHAVFHTQKTGRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKY 97 (795)
Q Consensus 24 ~edq~G~~dW~~~~vG~~------~~~~f~~~~~~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~ 97 (795)
|..+.|++.|++.+-+.. .......|...+++||+++.++.|+|+|++||+++|++.++.. +... +...++
T Consensus 68 ~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~--~~~~-p~~~~~ 144 (376)
T 3q7m_A 68 LNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGE--ALSR-PVVSDG 144 (376)
T ss_dssp EETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECSSC--CCSC-CEEETT
T ss_pred EEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCc--eEcC-CEEECC
Confidence 345679999999873221 1112233445688999999999999999999999999998755 2222 234456
Q ss_pred EEEEEccCCeEEEEeCCCCcEeEEEeccCccccCCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEeccCcc
Q 003791 98 VITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAES 176 (795)
Q Consensus 98 ~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~~~ 176 (795)
.+++++.++.|+++|+.||+++|+.....+.........+ ... ++.+++. .+|.|+++|..+|+++|+.....+.
T Consensus 145 ~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~---~~~-~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~ 220 (376)
T 3q7m_A 145 LVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAP---TTA-FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQAT 220 (376)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCC---EEE-TTEEEECCTTTEEEEEETTTCCEEEEEECCC--
T ss_pred EEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCc---EEE-CCEEEEEcCCCEEEEEECCCCcEEEEEecccCC
Confidence 7777776779999999999999999886543200000111 122 5677776 4899999999999999999876431
Q ss_pred ee--eee-----EEEEecCCEEEEEEecCCceeEEEEEEcCCCceeeeeeeeccCCcccceEEecCcEEEEEECCCCeEE
Q 003791 177 VE--VQQ-----VIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHETAAFSGGFVGDVALVSSDTLVTLDTTRSILV 249 (795)
Q Consensus 177 ~~--~~~-----vv~s~~~~~Vyvv~~~g~~~~~v~ald~~tG~~~w~~~v~~~~~~~~~~~~vg~~~lv~~d~~~~~L~ 249 (795)
.. ..+ ..+...++.+|+.+..| .++++|+.||+.+|+...... ..+.+.++.+++.+ ..+.++
T Consensus 221 ~~~~~~~~~~~~~~p~~~~~~v~~~~~~g----~l~~~d~~tG~~~w~~~~~~~-----~~~~~~~~~l~~~~-~~g~l~ 290 (376)
T 3q7m_A 221 GSTEIDRLSDVDTTPVVVNGVVFALAYNG----NLTALDLRSGQIMWKRELGSV-----NDFIVDGNRIYLVD-QNDRVM 290 (376)
T ss_dssp ---------CCCCCCEEETTEEEEECTTS----CEEEEETTTCCEEEEECCCCE-----EEEEEETTEEEEEE-TTCCEE
T ss_pred CCcccccccccCCCcEEECCEEEEEecCc----EEEEEECCCCcEEeeccCCCC-----CCceEECCEEEEEc-CCCeEE
Confidence 10 000 01124678999876555 699999999999999864321 12233445554554 357899
Q ss_pred EEEeecCee
Q 003791 250 TVSFKNRKI 258 (795)
Q Consensus 250 v~~l~sg~~ 258 (795)
++|..+|+.
T Consensus 291 ~~d~~tG~~ 299 (376)
T 3q7m_A 291 ALTIDGGVT 299 (376)
T ss_dssp EEETTTCCE
T ss_pred EEECCCCcE
Confidence 999998873
No 3
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=99.58 E-value=1.1e-13 Score=162.15 Aligned_cols=227 Identities=16% Similarity=0.190 Sum_probs=145.8
Q ss_pred ccceeEEEeccCceeeeeeeeeccCCCEEEEEeCCCEEEEEECcCCccceEEEcCCccee--------eeeeeeeCCEEE
Q 003791 28 VGLMDWHQQYIGKVKHAVFHTQKTGRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVV--------DGIDIALGKYVI 99 (795)
Q Consensus 28 ~G~~dW~~~~vG~~~~~~f~~~~~~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i--------~~l~~~~g~~~V 99 (795)
.++..|++++-+.........|...+++||+++..+.|+|||++||+++|++.+...... .+ +...++.|
T Consensus 43 ~~~~~W~~~~~~~~~~g~~~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g--~a~~~~~v 120 (582)
T 1flg_A 43 KLTPAWSYSFGDEKQRGQESQAIVSDGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRG--AAIYGDKV 120 (582)
T ss_dssp GCEEEEEEECCTTCCSCCCCCCEEETTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCC--CEEETTEE
T ss_pred CCcEEEEEECCCccCCcceeccEEECCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCc--cEEECCEE
Confidence 478999998743221111234555689999999966699999999999999998755211 12 23456677
Q ss_pred EEEccCCeEEEEeCCCCcEeEEEeccCccc---cCCceeccccccccCCC------eEEEEe-------CCEEEEEECCC
Q 003791 100 TLSSDGSTLRAWNLPDGQMVWESFLRGSKH---SKPLLLVPTNLKVDKDS------LILVSS-------KGCLHAVSSID 163 (795)
Q Consensus 100 ~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~---s~~~~~~~~~~~~~~~~------~V~V~~-------~g~l~ald~~t 163 (795)
|++..++.|+|+|+.||+++|+........ ....+++ . ++ .|++.. +|.|+|||++|
T Consensus 121 ~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v------~-~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~t 193 (582)
T 1flg_A 121 FFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTI------V-KDGKTGKVLLIHGSSGDEFGVVGRLFARDPDT 193 (582)
T ss_dssp EEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEE------E-ECTTTCCEEEEECCBCGGGCCBCEEEEECTTT
T ss_pred EEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEE------e-CCCcCCcEEEEEeccccccCCCCEEEEEECCC
Confidence 777666799999999999999998765311 0112222 1 23 566643 68999999999
Q ss_pred CcEEEEEeccCcceee---------------------------------------eeEEEEecCCEEEEEEec-------
Q 003791 164 GEILWTRDFAAESVEV---------------------------------------QQVIQLDESDQIYVVGYA------- 197 (795)
Q Consensus 164 G~~~W~~~~~~~~~~~---------------------------------------~~vv~s~~~~~Vyvv~~~------- 197 (795)
|+++|+.........+ ..+......+.||+....
T Consensus 194 G~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~ 273 (582)
T 1flg_A 194 GEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTW 273 (582)
T ss_dssp CCEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGG
T ss_pred CCEEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCc
Confidence 9999998653211000 001111245788876531
Q ss_pred -----C--------CceeEEEEEEcCCCceeeeeeeecc--CCc--ccceEEec-----C---cEEEEEECCCCeEEEEE
Q 003791 198 -----G--------SSQFHAYQINAMNGELLNHETAAFS--GGF--VGDVALVS-----S---DTLVTLDTTRSILVTVS 252 (795)
Q Consensus 198 -----g--------~~~~~v~ald~~tG~~~w~~~v~~~--~~~--~~~~~~vg-----~---~~lv~~d~~~~~L~v~~ 252 (795)
| .+.-.++|||++||+.+|+++.... ++. ...++++. + ..++..+ .+|.++++|
T Consensus 274 ~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~-~~G~l~~lD 352 (582)
T 1flg_A 274 ARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHAD-RNGFFYVVD 352 (582)
T ss_dssp GGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEEC-TTSEEEEEE
T ss_pred ccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEEC-CCceEEEEE
Confidence 1 0113799999999999999975322 111 12344433 1 2444454 579999999
Q ss_pred eecCeeeeEEEee
Q 003791 253 FKNRKIAFQETHL 265 (795)
Q Consensus 253 l~sg~~~~~~~~l 265 (795)
..+|++ +-++++
T Consensus 353 ~~tG~~-lw~~~~ 364 (582)
T 1flg_A 353 RSNGKL-QNAFPF 364 (582)
T ss_dssp TTTCCE-EEEEES
T ss_pred CCCCCE-eccccc
Confidence 999983 444443
No 4
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.56 E-value=1.3e-13 Score=164.44 Aligned_cols=225 Identities=16% Similarity=0.149 Sum_probs=147.4
Q ss_pred ccceeEEEeccCceeeeeeeeeccCCCEEEEEeCCCEEEEEECcCCccceEEEcCCccee--------eeeeeeeCCEEE
Q 003791 28 VGLMDWHQQYIGKVKHAVFHTQKTGRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVV--------DGIDIALGKYVI 99 (795)
Q Consensus 28 ~G~~dW~~~~vG~~~~~~f~~~~~~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i--------~~l~~~~g~~~V 99 (795)
.+++.|++++ |... .....|...+++||+++.++.|+|||++||+++|++.+...... ....+...++.|
T Consensus 54 ~~~~~W~~~~-~~~~-g~~~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v 131 (677)
T 1kb0_A 54 DLGLAWSYNL-ESTR-GVEATPVVVDGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKV 131 (677)
T ss_dssp GEEEEEEEEC-CCCS-CCCCCCEEETTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEE
T ss_pred CccEEEEEEC-CCCC-CceeCCEEECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEE
Confidence 3678899886 3221 11233445589999999999999999999999999998754211 001124456678
Q ss_pred EEEccCCeEEEEeCCCCcEeEEEecc-Cc----cccCCceeccccccccCCCeEEEEe-------CCEEEEEECCCCcEE
Q 003791 100 TLSSDGSTLRAWNLPDGQMVWESFLR-GS----KHSKPLLLVPTNLKVDKDSLILVSS-------KGCLHAVSSIDGEIL 167 (795)
Q Consensus 100 ~Vs~~g~~v~A~d~~tG~llWe~~~~-~~----~~s~~~~~~~~~~~~~~~~~V~V~~-------~g~l~ald~~tG~~~ 167 (795)
|+++.++.|+|||+.||+++|+.... .. .. ...+++ . ++.|++.. +|.|+++|.+||+++
T Consensus 132 ~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~-~~~p~v------~-~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~ 203 (677)
T 1kb0_A 132 YVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTI-TGAPRV------F-KGKVIIGNGGAEYGVRGYITAYDAETGERK 203 (677)
T ss_dssp EEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBC-CSCCEE------E-TTEEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred EEEcCCCEEEEEECCCCCEEeeecCCcCcCcCccc-ccCcEE------E-CCEEEEEecccccCCCCEEEEEECCCCcEE
Confidence 87776789999999999999999976 21 11 111222 2 56777753 589999999999999
Q ss_pred EEEeccCcce------------------------------eeeeEEEEecCCEEEEEEecC------------Cc---ee
Q 003791 168 WTRDFAAESV------------------------------EVQQVIQLDESDQIYVVGYAG------------SS---QF 202 (795)
Q Consensus 168 W~~~~~~~~~------------------------------~~~~vv~s~~~~~Vyvv~~~g------------~~---~~ 202 (795)
|++....+.. ....+......+.||+....+ +. ..
T Consensus 204 W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~ 283 (677)
T 1kb0_A 204 WRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLA 283 (677)
T ss_dssp EEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTT
T ss_pred EEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeE
Confidence 9998743220 001122123567888754332 00 01
Q ss_pred EEEEEEcCCCceeeeeeeecc--C--CcccceEEec----C---cEEEEEECCCCeEEEEEeecCeeeeEEEe
Q 003791 203 HAYQINAMNGELLNHETAAFS--G--GFVGDVALVS----S---DTLVTLDTTRSILVTVSFKNRKIAFQETH 264 (795)
Q Consensus 203 ~v~ald~~tG~~~w~~~v~~~--~--~~~~~~~~vg----~---~~lv~~d~~~~~L~v~~l~sg~~~~~~~~ 264 (795)
.++|||+.||+.+|+++.... + .....+++++ + +.++..+ .+|.++++|..+|++ +..++
T Consensus 284 sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~-~~G~l~~lD~~tG~~-l~~~~ 354 (677)
T 1kb0_A 284 SIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAP-KNGFFFVLDRTNGKF-ISAKN 354 (677)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECC-TTSEEEEEETTTCCE-EEEEE
T ss_pred EEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEEC-CCCEEEEEECCCCCE-ecccc
Confidence 599999999999999875322 1 1222344443 2 3455554 578999999999983 34444
No 5
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.56 E-value=2.2e-13 Score=159.25 Aligned_cols=226 Identities=16% Similarity=0.172 Sum_probs=146.3
Q ss_pred cceeEEEeccCceeeeeeeeeccCCCEEEEEeC-CCEEEEEEC-cCCccceEEEcCCcceee--------eeeeeeCCEE
Q 003791 29 GLMDWHQQYIGKVKHAVFHTQKTGRKRVVVSTE-ENVIASLDL-RHGEIFWRHVLGINDVVD--------GIDIALGKYV 98 (795)
Q Consensus 29 G~~dW~~~~vG~~~~~~f~~~~~~~~~v~vat~-~g~l~ALn~-~tG~ivWR~~l~~~~~i~--------~l~~~~g~~~ 98 (795)
.++.|++++ |... .....|...+++||+++. ++.|+|||+ +||+++|++.++...... ...+...++.
T Consensus 40 l~~~W~~~~-~~~~-g~~~~P~v~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (571)
T 2ad6_A 40 VKAAWSFST-GVLN-GHEGAPLVIGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQ 117 (571)
T ss_dssp CEEEEEEEC-SCCS-CCCSCCEEETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTE
T ss_pred ccEEEEEEC-CCCC-CcccccEEECCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCE
Confidence 468999987 3211 112335556899999999 899999999 999999999887542110 0112455667
Q ss_pred EEEEccCCeEEEEeCCCCcEeEEEeccCcccc---CCceeccccccccCCCeEEEEe-------CCEEEEEECCCCcEEE
Q 003791 99 ITLSSDGSTLRAWNLPDGQMVWESFLRGSKHS---KPLLLVPTNLKVDKDSLILVSS-------KGCLHAVSSIDGEILW 168 (795)
Q Consensus 99 V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s---~~~~~~~~~~~~~~~~~V~V~~-------~g~l~ald~~tG~~~W 168 (795)
||++..++.|+|+|+.||+++|+..+...... ...++ +. ++.|++.. +|.|+|||++||+++|
T Consensus 118 v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~------v~-~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 190 (571)
T 2ad6_A 118 IVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPF------VA-KDTVLMGCSGAELGVRGAVNAFDLKTGELKW 190 (571)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCE------EE-TTEEEEECBCGGGTCCCEEEEEETTTCCEEE
T ss_pred EEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCE------EE-CCEEEEEecCCccCCCCEEEEEECCCCcEEE
Confidence 88877677999999999999999987652110 11112 22 56777763 5899999999999999
Q ss_pred EEeccCccee----e--------------------------------eeEEEEecCCEEEEEEecC---------Cce--
Q 003791 169 TRDFAAESVE----V--------------------------------QQVIQLDESDQIYVVGYAG---------SSQ-- 201 (795)
Q Consensus 169 ~~~~~~~~~~----~--------------------------------~~vv~s~~~~~Vyvv~~~g---------~~~-- 201 (795)
++....+... | ..+..-...+.||+....+ +.+
T Consensus 191 ~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y 270 (571)
T 2ad6_A 191 RAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKW 270 (571)
T ss_dssp EEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTT
T ss_pred EEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCcee
Confidence 9987532200 0 0111112357888754221 011
Q ss_pred -eEEEEEEcCCCceeeeeeeecc--C--CcccceEEec---Cc----EEEEEECCCCeEEEEEeecCeeeeEEEee
Q 003791 202 -FHAYQINAMNGELLNHETAAFS--G--GFVGDVALVS---SD----TLVTLDTTRSILVTVSFKNRKIAFQETHL 265 (795)
Q Consensus 202 -~~v~ald~~tG~~~w~~~v~~~--~--~~~~~~~~vg---~~----~lv~~d~~~~~L~v~~l~sg~~~~~~~~l 265 (795)
-.++|||++||+.+|+++.... + +....+++++ ++ ++++.+ .+|.++++|..+|++ +-++++
T Consensus 271 ~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~-~~G~l~~lD~~tG~~-~w~~~~ 344 (571)
T 2ad6_A 271 TMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHID-RNGILYTLNRENGNL-IVAEKV 344 (571)
T ss_dssp TTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEEC-TTSEEEEEETTTCCE-EEEEES
T ss_pred EEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeC-CCcEEEEEECCCCCE-Eeeecc
Confidence 2599999999999999975421 1 1222444443 22 344554 568999999999983 344443
No 6
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.56 E-value=1.3e-13 Score=161.80 Aligned_cols=219 Identities=18% Similarity=0.155 Sum_probs=144.5
Q ss_pred ccceeEEEeccCceeeeeeeeeccCCCEEEEEeC-CCEEEEEEC-cCCccceEEEcCCccee----------eeeeeee-
Q 003791 28 VGLMDWHQQYIGKVKHAVFHTQKTGRKRVVVSTE-ENVIASLDL-RHGEIFWRHVLGINDVV----------DGIDIAL- 94 (795)
Q Consensus 28 ~G~~dW~~~~vG~~~~~~f~~~~~~~~~v~vat~-~g~l~ALn~-~tG~ivWR~~l~~~~~i----------~~l~~~~- 94 (795)
.++..|++++ |... .....|...+++||+++. ++.|+|||+ +||+++|++.+...... .+ +..
T Consensus 39 ~l~~~W~~~~-g~~~-g~~~tP~v~~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g--~av~ 114 (599)
T 1w6s_A 39 QLRPAWTFST-GLLN-GHEGAPLVVDGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRG--LAYW 114 (599)
T ss_dssp GEEEEEEEEC-SCCS-CCCSCCEEETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCC--CEEE
T ss_pred CCcEEEEEEC-CCCC-CceeccEEECCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccc--eEEE
Confidence 3678999986 3211 112335555899999999 899999999 99999999988754211 12 233
Q ss_pred -CCEE----EEEEccCCeEEEEeCCCCcEeEEEeccCccc---cCCceeccccccccCCCeEEEEe-------CCEEEEE
Q 003791 95 -GKYV----ITLSSDGSTLRAWNLPDGQMVWESFLRGSKH---SKPLLLVPTNLKVDKDSLILVSS-------KGCLHAV 159 (795)
Q Consensus 95 -g~~~----V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~---s~~~~~~~~~~~~~~~~~V~V~~-------~g~l~al 159 (795)
.++. ||+++.++.|+|+|+.||+++|+..+..... ....+++ . ++.|++.. +|.|+|+
T Consensus 115 p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v------~-~g~V~vg~~g~e~g~~g~v~A~ 187 (599)
T 1w6s_A 115 PGDGKTPALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYV------V-KDKVIIGSSGAELGVRGYLTAY 187 (599)
T ss_dssp CCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE------E-TTEEEECCBCGGGTCCCEEEEE
T ss_pred ecCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEE------E-CCEEEEEecccccCCCCeEEEE
Confidence 4455 7777666799999999999999998765210 0111222 2 56777753 6899999
Q ss_pred ECCCCcEEEEEeccCccee------------------------------------eeeEEEEecCCEEEEEEecCC----
Q 003791 160 SSIDGEILWTRDFAAESVE------------------------------------VQQVIQLDESDQIYVVGYAGS---- 199 (795)
Q Consensus 160 d~~tG~~~W~~~~~~~~~~------------------------------------~~~vv~s~~~~~Vyvv~~~g~---- 199 (795)
|++||+++|++....+... ......-...+.||+....+.
T Consensus 188 D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~ 267 (599)
T 1w6s_A 188 DVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNE 267 (599)
T ss_dssp ETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCG
T ss_pred ECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccC
Confidence 9999999999987543210 001111135678887543320
Q ss_pred --------ceeEEEEEEcCCCceeeeeeeecc--CC--cccceEEec-----C---cEEEEEECCCCeEEEEEeecCee
Q 003791 200 --------SQFHAYQINAMNGELLNHETAAFS--GG--FVGDVALVS-----S---DTLVTLDTTRSILVTVSFKNRKI 258 (795)
Q Consensus 200 --------~~~~v~ald~~tG~~~w~~~v~~~--~~--~~~~~~~vg-----~---~~lv~~d~~~~~L~v~~l~sg~~ 258 (795)
+.-.++|||++||+.+|+++.... ++ ....++++. + ..++..+ .+|.++++|..+|+.
T Consensus 268 ~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~-~~G~l~~lD~~tG~~ 345 (599)
T 1w6s_A 268 TMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPD-RNGIVYTLDRTDGAL 345 (599)
T ss_dssp GGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEEC-TTSEEEEEETTTCCE
T ss_pred cccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEEC-CCcEEEEEECCCCCE
Confidence 012699999999999999975432 11 222344432 2 2444454 568999999999983
No 7
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.55 E-value=1.4e-13 Score=164.53 Aligned_cols=222 Identities=17% Similarity=0.191 Sum_probs=141.1
Q ss_pred cceeEEEeccCceeeeeeeeeccCCCEEEEEeCCCEEEEEECcCCccceEEEcCCcce---------eeeeeeeeCCEEE
Q 003791 29 GLMDWHQQYIGKVKHAVFHTQKTGRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDV---------VDGIDIALGKYVI 99 (795)
Q Consensus 29 G~~dW~~~~vG~~~~~~f~~~~~~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~---------i~~l~~~~g~~~V 99 (795)
++..|++++ |... .....|...+++||+++.++.|+|||++||+++|++....... +... +...++.|
T Consensus 48 l~~~W~~~~-~~~~-~~~~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~v 124 (689)
T 1yiq_A 48 LGLAWSYKL-DLDR-GVEATPIVVDGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRG-VAVWKGKV 124 (689)
T ss_dssp EEEEEEEEC-SSCS-CCCCCCEEETTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCC-CEEETTEE
T ss_pred ceEEEEEEC-CCCC-CceecCEEECCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCc-cEEECCEE
Confidence 468899986 3221 1122344558999999999999999999999999998765421 1111 23456678
Q ss_pred EEEccCCeEEEEeCCCCcEeEEEecc-CccccCCceeccccccccCCCeEEEEe-------CCEEEEEECCCCcEEEEEe
Q 003791 100 TLSSDGSTLRAWNLPDGQMVWESFLR-GSKHSKPLLLVPTNLKVDKDSLILVSS-------KGCLHAVSSIDGEILWTRD 171 (795)
Q Consensus 100 ~Vs~~g~~v~A~d~~tG~llWe~~~~-~~~~s~~~~~~~~~~~~~~~~~V~V~~-------~g~l~ald~~tG~~~W~~~ 171 (795)
++++.++.|+|||+.||+++|+.... ...........+ .+. ++.|++.. +|.|+|+|++||+++|++.
T Consensus 125 ~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP---~v~-~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 125 YVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAP---RVV-NGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp EEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCC---EEE-TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCc---EEE-CCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 87776789999999999999999875 211100000111 122 56777753 5899999999999999997
Q ss_pred ccC--cce---------------------------eeeeEEEEecCCEEEEEEecCC------------ce---eEEEEE
Q 003791 172 FAA--ESV---------------------------EVQQVIQLDESDQIYVVGYAGS------------SQ---FHAYQI 207 (795)
Q Consensus 172 ~~~--~~~---------------------------~~~~vv~s~~~~~Vyvv~~~g~------------~~---~~v~al 207 (795)
... +.. ....+......+.||+...++. .+ ..++|+
T Consensus 201 ~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~Al 280 (689)
T 1yiq_A 201 TVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAV 280 (689)
T ss_dssp SSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEE
T ss_pred ccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 421 100 0001211224678887543321 00 149999
Q ss_pred EcCCCceeeeeeeecc--CC--cccceEEec----Cc---EEEEEECCCCeEEEEEeecCee
Q 003791 208 NAMNGELLNHETAAFS--GG--FVGDVALVS----SD---TLVTLDTTRSILVTVSFKNRKI 258 (795)
Q Consensus 208 d~~tG~~~w~~~v~~~--~~--~~~~~~~vg----~~---~lv~~d~~~~~L~v~~l~sg~~ 258 (795)
|++||+.+|+++.... ++ ....+++.+ +. .++..+ .+|.++++|..+|++
T Consensus 281 D~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~-~~G~l~~lD~~tG~~ 341 (689)
T 1yiq_A 281 NADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAP-KNGFFYVIDRATGEL 341 (689)
T ss_dssp ETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECC-TTSEEEEEETTTCCE
T ss_pred EccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEEC-CCCeEEEEECCCCCE
Confidence 9999999999864321 12 222333321 21 454554 568999999999983
No 8
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.54 E-value=2.2e-13 Score=162.19 Aligned_cols=223 Identities=15% Similarity=0.186 Sum_probs=141.3
Q ss_pred ccceeEEEeccCceeeeeeeeeccCCCEEEEEeCCCEEEEEECcCCccceEEEcCCccee---------eeeeeeeCCEE
Q 003791 28 VGLMDWHQQYIGKVKHAVFHTQKTGRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVV---------DGIDIALGKYV 98 (795)
Q Consensus 28 ~G~~dW~~~~vG~~~~~~f~~~~~~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i---------~~l~~~~g~~~ 98 (795)
.++..|++++-+ .. .....|...+++||+++.++.|+|||++||+++|++.+...... ... +...++.
T Consensus 43 ~l~~~W~~~~~~-~~-~~~~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 119 (668)
T 1kv9_A 43 SLGLAWYMDLDN-TR-GLEATPLFHDGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRG-VALWGDK 119 (668)
T ss_dssp GEEEEEEEECSC-CS-CCCCCCEEETTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCC-CEEEBTE
T ss_pred CcceEEEEECCC-CC-CcccCCEEECCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccc-eEEECCE
Confidence 356889998732 11 11223445589999999999999999999999999988654210 111 2345567
Q ss_pred EEEEccCCeEEEEeCCCCcEeEEEeccCccccCCceeccccccccCCCeEEEEe-------CCEEEEEECCCCcEEEEEe
Q 003791 99 ITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSS-------KGCLHAVSSIDGEILWTRD 171 (795)
Q Consensus 99 V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~~-------~g~l~ald~~tG~~~W~~~ 171 (795)
||+++.++.|+|||+.||+++|+...............+ .+. ++.|++.. +|.|+|||++||+++|++.
T Consensus 120 v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P---~v~-~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 120 VYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAP---RVV-KGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCC---EEE-TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCC---EEE-CCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 777776779999999999999999875321100000111 122 56777753 3899999999999999997
Q ss_pred ccC--ccee---------------------------eeeEEEEecCCEEEEEEecCC------------c---eeEEEEE
Q 003791 172 FAA--ESVE---------------------------VQQVIQLDESDQIYVVGYAGS------------S---QFHAYQI 207 (795)
Q Consensus 172 ~~~--~~~~---------------------------~~~vv~s~~~~~Vyvv~~~g~------------~---~~~v~al 207 (795)
... +... ...+......+.||+....+. . ...++||
T Consensus 196 ~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~Al 275 (668)
T 1kv9_A 196 TVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAI 275 (668)
T ss_dssp SSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEE
T ss_pred ccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 521 1100 001111124578887543321 0 0149999
Q ss_pred EcCCCceeeeeeeecc--CC--cccceEEe----cCc---EEEEEECCCCeEEEEEeecCee
Q 003791 208 NAMNGELLNHETAAFS--GG--FVGDVALV----SSD---TLVTLDTTRSILVTVSFKNRKI 258 (795)
Q Consensus 208 d~~tG~~~w~~~v~~~--~~--~~~~~~~v----g~~---~lv~~d~~~~~L~v~~l~sg~~ 258 (795)
|+.||+.+|+++.... ++ ....+++. ++. .++..+ .+|.++++|..+|++
T Consensus 276 D~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~-~~G~l~~lD~~tG~~ 336 (668)
T 1kv9_A 276 RPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAP-KNGFFYVLDRTNGKL 336 (668)
T ss_dssp CTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECC-TTSEEEEEETTTCCE
T ss_pred cCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEEC-CCCEEEEEECCCCCE
Confidence 9999999999975321 11 22223322 222 344444 568999999999883
No 9
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.47 E-value=7e-14 Score=154.41 Aligned_cols=185 Identities=12% Similarity=0.034 Sum_probs=100.5
Q ss_pred eeccCCCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCE-EEEEEccCCeEEEEeCCCCcEeEEEeccC
Q 003791 48 TQKTGRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKY-VITLSSDGSTLRAWNLPDGQMVWESFLRG 126 (795)
Q Consensus 48 ~~~~~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~-~V~Vs~~g~~v~A~d~~tG~llWe~~~~~ 126 (795)
.|..+++.||+++.+|.|+|+|++||+++|+... .. +... +...++ ++++++.++.|++||++||+.+|++....
T Consensus 4 sP~v~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~--~~s~-p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~ 79 (369)
T 2hz6_A 4 TVTLPETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DP--VLQV-PTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTI 79 (369)
T ss_dssp ----CTTEEEEEETTSEEEEEETTTCCEEEEEEC-CC--SCCC-C-----CCEEECTTTCCEEEC-----CCSEECSCCH
T ss_pred CCeeeCCEEEEEcCCCEEEEEECCCCCEEEEecC-CC--ceec-ceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccC
Confidence 3555688999999999999999999999999988 22 3333 233344 55544566799999999999999987653
Q ss_pred ccccCCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEE
Q 003791 127 SKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAY 205 (795)
Q Consensus 127 ~~~s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ 205 (795)
+......+++ ..++.|++. .++.|+++|++||+++|++...... .. +..++.+|+.+.++ .++
T Consensus 80 ~~~~~~sp~~------~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~~----~~--~p~~~~v~~~~~dg----~v~ 143 (369)
T 2hz6_A 80 PELVQASPCR------SSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFAD----SL--SPSTSLLYLGRTEY----TIT 143 (369)
T ss_dssp HHHHTTCSCC-----------CCCCEEEEEEEEECCC----------------------------EEEEEEEE----EEE
T ss_pred ccccccCceE------ecCCEEEEEeCCCEEEEEECCCCcEEEEecCCCcc----cc--cccCCEEEEEecCC----EEE
Confidence 2210111121 114556655 5889999999999999998765421 12 12567888766665 799
Q ss_pred EEEcCCCceeeeeeeeccCCcccceEEec----CcEEEEEECCCCeEEEEEeecCe
Q 003791 206 QINAMNGELLNHETAAFSGGFVGDVALVS----SDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 206 ald~~tG~~~w~~~v~~~~~~~~~~~~vg----~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
++|+.||+.+|+....... .+.+.+ ++.+++.+ ..|.++++|..+|+
T Consensus 144 a~d~~tG~~~W~~~~~~~~----~~~~~~~~~~~~~v~~~~-~dg~v~a~d~~tG~ 194 (369)
T 2hz6_A 144 MYDTKTRELRWNATYFDYA----ASLPEDDVDYKMSHFVSN-GDGLVVTVDSESGD 194 (369)
T ss_dssp CCCSSSSSCCCEEEEEEEC----CBCCCCCTTCCCCEEEEE-TSCEEEEECTTTCC
T ss_pred EEECCCCCEEEeEeccccc----CccccCCccccceEEEEC-CCCEEEEEECCCCc
Confidence 9999999999998654321 111111 12233333 35788888888877
No 10
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=99.44 E-value=2.8e-11 Score=141.71 Aligned_cols=192 Identities=15% Similarity=0.207 Sum_probs=117.2
Q ss_pred eccccceeEEEeccCceeee-----eeeeeccCCCEEEEEeCCCEEEEEECcCCccceEEEcCCcc---eeeeeeeeeCC
Q 003791 25 EDQVGLMDWHQQYIGKVKHA-----VFHTQKTGRKRVVVSTEENVIASLDLRHGEIFWRHVLGIND---VVDGIDIALGK 96 (795)
Q Consensus 25 edq~G~~dW~~~~vG~~~~~-----~f~~~~~~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~---~i~~l~~~~g~ 96 (795)
..+.|+..|++..-...... .-..+...+++||+++.++.|+|||++||+++|++.+.... .+.+. +...+
T Consensus 84 D~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~s-P~v~~ 162 (582)
T 1flg_A 84 DAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGA-PTIVK 162 (582)
T ss_dssp ESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSC-CEEEE
T ss_pred ECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccC-CEEeC
Confidence 34689999999874322110 01123345889999999999999999999999999986531 12222 22233
Q ss_pred E------EEEEEcc------CCeEEEEeCCCCcEeEEEeccCcccc------------CCcee-------------c---
Q 003791 97 Y------VITLSSD------GSTLRAWNLPDGQMVWESFLRGSKHS------------KPLLL-------------V--- 136 (795)
Q Consensus 97 ~------~V~Vs~~------g~~v~A~d~~tG~llWe~~~~~~~~s------------~~~~~-------------~--- 136 (795)
+ .|+++.. ++.|+|+|+.||+++|+......... ..... .
T Consensus 163 ~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~ 242 (582)
T 1flg_A 163 DGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSH 242 (582)
T ss_dssp CTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGG
T ss_pred CCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccccccccCCCcccccccccccccc
Confidence 3 7777542 46899999999999998875311000 00000 0
Q ss_pred -c----cccccc-CCCeEEEEeC-------------------------CEEEEEECCCCcEEEEEeccCcce----eeee
Q 003791 137 -P----TNLKVD-KDSLILVSSK-------------------------GCLHAVSSIDGEILWTRDFAAESV----EVQQ 181 (795)
Q Consensus 137 -~----~~~~~~-~~~~V~V~~~-------------------------g~l~ald~~tG~~~W~~~~~~~~~----~~~~ 181 (795)
+ .....+ ..+.||+... +.|+|||++||+++|+++...... ...+
T Consensus 243 gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~ 322 (582)
T 1flg_A 243 GGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNE 322 (582)
T ss_dssp CBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCC
T ss_pred CCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCC
Confidence 0 000111 2467777531 589999999999999997643210 0011
Q ss_pred -EE-EEe-cCC----EEEEEEecCCceeEEEEEEcCCCceeeeeeee
Q 003791 182 -VI-QLD-ESD----QIYVVGYAGSSQFHAYQINAMNGELLNHETAA 221 (795)
Q Consensus 182 -vv-~s~-~~~----~Vyvv~~~g~~~~~v~ald~~tG~~~w~~~v~ 221 (795)
++ ... .++ .+++.+.+| .+++||+.||+++|+..+.
T Consensus 323 p~l~~~~~~~G~~~~~v~~~~~~G----~l~~lD~~tG~~lw~~~~~ 365 (582)
T 1flg_A 323 LVLFDYKAKDGKIVKATAHADRNG----FFYVVDRSNGKLQNAFPFV 365 (582)
T ss_dssp CEEEEEECSSSCEEEEEEEECTTS----EEEEEETTTCCEEEEEESS
T ss_pred cEEEeeecCCCCEEEEEEEECCCc----eEEEEECCCCCEecccccc
Confidence 11 111 133 344333334 7999999999999987643
No 11
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.44 E-value=1.6e-11 Score=146.34 Aligned_cols=189 Identities=15% Similarity=0.217 Sum_probs=114.8
Q ss_pred ccccceeEEEeccCceee-------eeeeeeccCCCEEEEEeCCCEEEEEECcCCccceEEEcC-Cc---ceeeeeeeee
Q 003791 26 DQVGLMDWHQQYIGKVKH-------AVFHTQKTGRKRVVVSTEENVIASLDLRHGEIFWRHVLG-IN---DVVDGIDIAL 94 (795)
Q Consensus 26 dq~G~~dW~~~~vG~~~~-------~~f~~~~~~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~-~~---~~i~~l~~~~ 94 (795)
.+.|+..|+++.-..... .....+...+++||+++.++.|+|||++||+++|++.+. .. ..+.+. +..
T Consensus 94 ~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~-p~v 172 (677)
T 1kb0_A 94 TRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGA-PRV 172 (677)
T ss_dssp TTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSC-CEE
T ss_pred CCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccC-cEE
Confidence 468999999987432210 011123445889999999999999999999999999986 21 112222 234
Q ss_pred CCEEEEEEcc------CCeEEEEeCCCCcEeEEEeccCccccCCc------------------ee--cc----cccccc-
Q 003791 95 GKYVITLSSD------GSTLRAWNLPDGQMVWESFLRGSKHSKPL------------------LL--VP----TNLKVD- 143 (795)
Q Consensus 95 g~~~V~Vs~~------g~~v~A~d~~tG~llWe~~~~~~~~s~~~------------------~~--~~----~~~~~~- 143 (795)
.++.|+++.. ++.|+|||+.||+++|++....+..+... .. -+ .....+
T Consensus 173 ~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~ 252 (677)
T 1kb0_A 173 FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDA 252 (677)
T ss_dssp ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEET
T ss_pred ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcC
Confidence 4567777543 47899999999999999987543210000 00 00 000111
Q ss_pred CCCeEEEEe-CC-------------------EEEEEECCCCcEEEEEeccCcce----eeee--EEEEecCC----EEEE
Q 003791 144 KDSLILVSS-KG-------------------CLHAVSSIDGEILWTRDFAAESV----EVQQ--VIQLDESD----QIYV 193 (795)
Q Consensus 144 ~~~~V~V~~-~g-------------------~l~ald~~tG~~~W~~~~~~~~~----~~~~--vv~s~~~~----~Vyv 193 (795)
..+.|++.. ++ .|+|||++||+++|+++...... ...+ +.....++ .+++
T Consensus 253 ~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~ 332 (677)
T 1kb0_A 253 ELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILH 332 (677)
T ss_dssp TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEE
T ss_pred CCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEE
Confidence 145666653 32 59999999999999988643210 0011 11111122 3343
Q ss_pred EEecCCceeEEEEEEcCCCceeeeee
Q 003791 194 VGYAGSSQFHAYQINAMNGELLNHET 219 (795)
Q Consensus 194 v~~~g~~~~~v~ald~~tG~~~w~~~ 219 (795)
.+.+| .+++||..||+++|+..
T Consensus 333 ~~~~G----~l~~lD~~tG~~l~~~~ 354 (677)
T 1kb0_A 333 APKNG----FFFVLDRTNGKFISAKN 354 (677)
T ss_dssp CCTTS----EEEEEETTTCCEEEEEE
T ss_pred ECCCC----EEEEEECCCCCEecccc
Confidence 33333 68888888888887765
No 12
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.41 E-value=1.5e-11 Score=130.19 Aligned_cols=181 Identities=9% Similarity=0.118 Sum_probs=118.8
Q ss_pred ceeeccccceeEEEeccC--ceeeeeeeeeccCCCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEE
Q 003791 22 SLYEDQVGLMDWHQQYIG--KVKHAVFHTQKTGRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVI 99 (795)
Q Consensus 22 Al~edq~G~~dW~~~~vG--~~~~~~f~~~~~~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V 99 (795)
.++..+.|++.|+...-+ .+....+. | ++++++ +.++.|.++|+ +|+++|+...+....+....+..+++++
T Consensus 18 ~~~d~~tG~~~w~~~~~~~~~~~~~~~~-p---dG~ilv-s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~l 91 (276)
T 3no2_A 18 AIINKDTKEIVWEYPLEKGWECNSVAAT-K---AGEILF-SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNAL 91 (276)
T ss_dssp EEEETTTTEEEEEEECCTTCCCCEEEEC-T---TSCEEE-ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEE
T ss_pred EEEECCCCeEEEEeCCCccCCCcCeEEC-C---CCCEEE-eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEE
Confidence 566667999999998633 12222232 2 566777 67888999999 9999999998643233333223344455
Q ss_pred EEEcc-CCeEEEEeCCCCcEeEEEeccCccccCCceeccccccccCCCeEEEE--eCCEEEEEECCCCcEEEEEeccCcc
Q 003791 100 TLSSD-GSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS--SKGCLHAVSSIDGEILWTRDFAAES 176 (795)
Q Consensus 100 ~Vs~~-g~~v~A~d~~tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~--~~g~l~ald~~tG~~~W~~~~~~~~ 176 (795)
+.... .+++.++|+ +|+++|++.+............. .....++.+++. .++.|+++|++ |+.+|++..+...
T Consensus 92 v~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~--v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~~~ 167 (276)
T 3no2_A 92 VAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQ--INKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSGTP 167 (276)
T ss_dssp EEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSC--CEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSSCC
T ss_pred EEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccC--ceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCCCc
Confidence 54333 568999997 99999999876432100000000 011224555554 48999999988 9999999886432
Q ss_pred eeeeeEEEEecCCEEEEEEecCCceeEEEEEEcCCCceeeeee
Q 003791 177 VEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHET 219 (795)
Q Consensus 177 ~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~tG~~~w~~~ 219 (795)
. .+. ...++.+++.+..++ +++++|++||+.+|+..
T Consensus 168 ~---~~~-~~~~g~~~v~~~~~~---~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 168 F---SSA-FLDNGDCLVACGDAH---CFVQLNLESNRIVRRVN 203 (276)
T ss_dssp C---EEE-ECTTSCEEEECBTTS---EEEEECTTTCCEEEEEE
T ss_pred c---cee-EcCCCCEEEEeCCCC---eEEEEeCcCCcEEEEec
Confidence 2 222 235666776666654 79999999999999996
No 13
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.40 E-value=4e-11 Score=142.70 Aligned_cols=187 Identities=17% Similarity=0.276 Sum_probs=113.0
Q ss_pred ccccceeEEEeccCceee-------eeeeeeccCCCEEEEEeCCCEEEEEECcCCccceEEEcCCcc---eeeeeeeeeC
Q 003791 26 DQVGLMDWHQQYIGKVKH-------AVFHTQKTGRKRVVVSTEENVIASLDLRHGEIFWRHVLGIND---VVDGIDIALG 95 (795)
Q Consensus 26 dq~G~~dW~~~~vG~~~~-------~~f~~~~~~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~---~i~~l~~~~g 95 (795)
.+.|+..|++..-..... .....|...+++||+++.++.|+|||++||+++|++.+.... .+.+. +...
T Consensus 83 ~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~-P~v~ 161 (668)
T 1kv9_A 83 AASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGA-PRVV 161 (668)
T ss_dssp TTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSC-CEEE
T ss_pred CCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCC-CEEE
Confidence 468999999976322110 001123445789999999999999999999999999985321 12222 2344
Q ss_pred CEEEEEEcc------CCeEEEEeCCCCcEeEEEeccCccccCC--ce-e------c-----------c---cccccc-CC
Q 003791 96 KYVITLSSD------GSTLRAWNLPDGQMVWESFLRGSKHSKP--LL-L------V-----------P---TNLKVD-KD 145 (795)
Q Consensus 96 ~~~V~Vs~~------g~~v~A~d~~tG~llWe~~~~~~~~s~~--~~-~------~-----------~---~~~~~~-~~ 145 (795)
++.|+++.. ++.|+|||+.||+++|++......-... .. + . + .....+ ..
T Consensus 162 ~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~ 241 (668)
T 1kv9_A 162 KGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPEL 241 (668)
T ss_dssp TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTT
T ss_pred CCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCC
Confidence 567777643 3689999999999999998632110000 00 0 0 0 000111 14
Q ss_pred CeEEEEe-CC-------------------EEEEEECCCCcEEEEEeccCcce------eeeeEEEEecCCE----EEEEE
Q 003791 146 SLILVSS-KG-------------------CLHAVSSIDGEILWTRDFAAESV------EVQQVIQLDESDQ----IYVVG 195 (795)
Q Consensus 146 ~~V~V~~-~g-------------------~l~ald~~tG~~~W~~~~~~~~~------~~~~vv~s~~~~~----Vyvv~ 195 (795)
+.|++.. ++ .|+|||++||+++|+++...... .+..+.....++. +++.+
T Consensus 242 ~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~ 321 (668)
T 1kv9_A 242 DLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAP 321 (668)
T ss_dssp TEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECC
T ss_pred CEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEEC
Confidence 5677753 43 49999999999999998742110 0111111112332 44333
Q ss_pred ecCCceeEEEEEEcCCCceeee
Q 003791 196 YAGSSQFHAYQINAMNGELLNH 217 (795)
Q Consensus 196 ~~g~~~~~v~ald~~tG~~~w~ 217 (795)
.+| .+++||..||+++|.
T Consensus 322 ~~G----~l~~lD~~tG~~l~~ 339 (668)
T 1kv9_A 322 KNG----FFYVLDRTNGKLISA 339 (668)
T ss_dssp TTS----EEEEEETTTCCEEEE
T ss_pred CCC----EEEEEECCCCCEecc
Confidence 333 788888888888844
No 14
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.40 E-value=7.9e-12 Score=146.58 Aligned_cols=190 Identities=14% Similarity=0.204 Sum_probs=119.5
Q ss_pred cccceeEEEeccCcee-e------eeeeeecc--CCCE----EEEEeCCCEEEEEECcCCccceEEEcCCcc---eeeee
Q 003791 27 QVGLMDWHQQYIGKVK-H------AVFHTQKT--GRKR----VVVSTEENVIASLDLRHGEIFWRHVLGIND---VVDGI 90 (795)
Q Consensus 27 q~G~~dW~~~~vG~~~-~------~~f~~~~~--~~~~----v~vat~~g~l~ALn~~tG~ivWR~~l~~~~---~i~~l 90 (795)
+.|+..|+++.-.... . ..-..+.. .+++ ||+++.++.|+|||++||+++|++.+.... .+.+.
T Consensus 82 ~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ss 161 (599)
T 1w6s_A 82 DPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIA 161 (599)
T ss_dssp CTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSC
T ss_pred CCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecC
Confidence 6899999998743211 0 00111333 4555 999999999999999999999999986521 22233
Q ss_pred eeeeCCEEEEEEcc------CCeEEEEeCCCCcEeEEEeccCccccC--------Cceec-----------------c--
Q 003791 91 DIALGKYVITLSSD------GSTLRAWNLPDGQMVWESFLRGSKHSK--------PLLLV-----------------P-- 137 (795)
Q Consensus 91 ~~~~g~~~V~Vs~~------g~~v~A~d~~tG~llWe~~~~~~~~s~--------~~~~~-----------------~-- 137 (795)
+...++.|++++. ++.|+|+|+.||+++|++....+.... ..+.+ +
T Consensus 162 -P~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~ 240 (599)
T 1w6s_A 162 -PYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGG 240 (599)
T ss_dssp -CEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCC
T ss_pred -CEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCC
Confidence 2344567777652 479999999999999999976543100 00000 0
Q ss_pred ---cccccc-CCCeEEEEe-C----------------CEEEEEECCCCcEEEEEeccCcce----eeee--EEEEe-cCC
Q 003791 138 ---TNLKVD-KDSLILVSS-K----------------GCLHAVSSIDGEILWTRDFAAESV----EVQQ--VIQLD-ESD 189 (795)
Q Consensus 138 ---~~~~~~-~~~~V~V~~-~----------------g~l~ald~~tG~~~W~~~~~~~~~----~~~~--vv~s~-~~~ 189 (795)
.....+ ..+.||+.. + +.|+|||++||+++|.++...... ...+ +.+.. .++
T Consensus 241 ~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G 320 (599)
T 1w6s_A 241 TNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDG 320 (599)
T ss_dssp CCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTS
T ss_pred ccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCC
Confidence 000111 246677753 3 489999999999999998764311 0111 11111 234
Q ss_pred ---EEEEEEecCCceeEEEEEEcCCCceeeeeee
Q 003791 190 ---QIYVVGYAGSSQFHAYQINAMNGELLNHETA 220 (795)
Q Consensus 190 ---~Vyvv~~~g~~~~~v~ald~~tG~~~w~~~v 220 (795)
.+++.+...+ .+++||..||+++|+.++
T Consensus 321 ~~~~~v~~~~~~G---~l~~lD~~tG~~lw~~~~ 351 (599)
T 1w6s_A 321 KARKLLTHPDRNG---IVYTLDRTDGALVSANKL 351 (599)
T ss_dssp CEEEEEEEECTTS---EEEEEETTTCCEEEEEES
T ss_pred cEEEEEEEECCCc---EEEEEECCCCCEeecccc
Confidence 3444332222 899999999999999853
No 15
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.38 E-value=4.6e-11 Score=126.51 Aligned_cols=192 Identities=19% Similarity=0.245 Sum_probs=119.9
Q ss_pred CCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccCC
Q 003791 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKP 132 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~~ 132 (795)
++.|++++.++.|+++|++||+++|++..+............++. ++++. ++.|++||+ +|+++|++..........
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~-ilvs~-~~~V~~~d~-~G~~~W~~~~~~~~~~~~ 81 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGE-ILFSY-SKGAKMITR-DGRELWNIAAPAGCEMQT 81 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSC-EEEEC-BSEEEEECT-TSCEEEEEECCTTCEEEE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCC-EEEeC-CCCEEEECC-CCCEEEEEcCCCCccccc
Confidence 556788888999999999999999999986521122222222333 44455 458999999 999999999752111011
Q ss_pred ceeccccccccCCCeEEEE-e--CCEEEEEECCCCcEEEEEeccCcc----eeeeeEEEEecCCEEEEEEecCCceeEEE
Q 003791 133 LLLVPTNLKVDKDSLILVS-S--KGCLHAVSSIDGEILWTRDFAAES----VEVQQVIQLDESDQIYVVGYAGSSQFHAY 205 (795)
Q Consensus 133 ~~~~~~~~~~~~~~~V~V~-~--~g~l~ald~~tG~~~W~~~~~~~~----~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ 205 (795)
.... .++.+++. . +++++++|. +|+.+|++...... ..+..+. ...++.+++.....+ +|.
T Consensus 82 ~~~~-------~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~-~~~~G~~lv~~~~~~---~v~ 149 (276)
T 3no2_A 82 ARIL-------PDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQIN-KNKKGNYLVPLFATS---EVR 149 (276)
T ss_dssp EEEC-------TTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCE-ECTTSCEEEEETTTT---EEE
T ss_pred cEEC-------CCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCce-ECCCCCEEEEecCCC---EEE
Confidence 1122 24555554 3 679999996 99999999864321 0111121 124455555444433 899
Q ss_pred EEEcCCCceeeeeeeeccCCcccceEEecCcEEEEEECCCCeEEEEEeecCeeeeEEEe
Q 003791 206 QINAMNGELLNHETAAFSGGFVGDVALVSSDTLVTLDTTRSILVTVSFKNRKIAFQETH 264 (795)
Q Consensus 206 ald~~tG~~~w~~~v~~~~~~~~~~~~vg~~~lv~~d~~~~~L~v~~l~sg~~~~~~~~ 264 (795)
++|++ |+.+|++... ....+.+.+.++++++ .+..++.+.+++..+|++ +-++.
T Consensus 150 ~~d~~-G~~~w~~~~~--~~~~~~~~~~~g~~~v-~~~~~~~v~~~d~~tG~~-~w~~~ 203 (276)
T 3no2_A 150 EIAPN-GQLLNSVKLS--GTPFSSAFLDNGDCLV-ACGDAHCFVQLNLESNRI-VRRVN 203 (276)
T ss_dssp EECTT-SCEEEEEECS--SCCCEEEECTTSCEEE-ECBTTSEEEEECTTTCCE-EEEEE
T ss_pred EECCC-CCEEEEEECC--CCccceeEcCCCCEEE-EeCCCCeEEEEeCcCCcE-EEEec
Confidence 99998 9999999653 1222223333444554 344556788899888883 44443
No 16
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.38 E-value=1.8e-11 Score=143.04 Aligned_cols=190 Identities=18% Similarity=0.230 Sum_probs=119.7
Q ss_pred cccceeEEEeccCcee-e------eeeeeeccCCCEEEEEeCCCEEEEEECcCCccceEEEcCCcc---eeeeeeeeeCC
Q 003791 27 QVGLMDWHQQYIGKVK-H------AVFHTQKTGRKRVVVSTEENVIASLDLRHGEIFWRHVLGIND---VVDGIDIALGK 96 (795)
Q Consensus 27 q~G~~dW~~~~vG~~~-~------~~f~~~~~~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~---~i~~l~~~~g~ 96 (795)
+.|+..|++++-.... . ..-..|...+++||+++.++.|+|||++||+++|++.+.... .+.+. +...+
T Consensus 82 ~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~-P~v~~ 160 (571)
T 2ad6_A 82 DPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQA-PFVAK 160 (571)
T ss_dssp CTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSC-CEEET
T ss_pred CCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccC-CEEEC
Confidence 6899999998643211 0 011124455889999999999999999999999999986521 12222 23445
Q ss_pred EEEEEEcc------CCeEEEEeCCCCcEeEEEeccCcccc---CC-----ceec-----------------c-----ccc
Q 003791 97 YVITLSSD------GSTLRAWNLPDGQMVWESFLRGSKHS---KP-----LLLV-----------------P-----TNL 140 (795)
Q Consensus 97 ~~V~Vs~~------g~~v~A~d~~tG~llWe~~~~~~~~s---~~-----~~~~-----------------~-----~~~ 140 (795)
+.|+++.. ++.|+|+|+.||+++|++....+... .+ .++. + ...
T Consensus 161 g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~ 240 (571)
T 2ad6_A 161 DTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWY 240 (571)
T ss_dssp TEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCC
T ss_pred CEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeE
Confidence 67777654 47999999999999999987643200 00 0000 0 000
Q ss_pred ccc-CCCeEEEEeC-----------------CEEEEEECCCCcEEEEEeccCcce----eeee-E-EEEecCC---EEEE
Q 003791 141 KVD-KDSLILVSSK-----------------GCLHAVSSIDGEILWTRDFAAESV----EVQQ-V-IQLDESD---QIYV 193 (795)
Q Consensus 141 ~~~-~~~~V~V~~~-----------------g~l~ald~~tG~~~W~~~~~~~~~----~~~~-v-v~s~~~~---~Vyv 193 (795)
..+ ..+.|++..+ +.|+|||++||+++|+++...... .... + .....++ .+++
T Consensus 241 a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~ 320 (571)
T 2ad6_A 241 AYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLS 320 (571)
T ss_dssp EEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEE
T ss_pred EEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEE
Confidence 111 1356776531 369999999999999998753210 0111 1 1111244 2343
Q ss_pred EEecCCceeEEEEEEcCCCceeeeeee
Q 003791 194 VGYAGSSQFHAYQINAMNGELLNHETA 220 (795)
Q Consensus 194 v~~~g~~~~~v~ald~~tG~~~w~~~v 220 (795)
.+...+ .+++||++||+++|+.++
T Consensus 321 ~~~~~G---~l~~lD~~tG~~~w~~~~ 344 (571)
T 2ad6_A 321 HIDRNG---ILYTLNRENGNLIVAEKV 344 (571)
T ss_dssp EECTTS---EEEEEETTTCCEEEEEES
T ss_pred EeCCCc---EEEEEECCCCCEEeeecc
Confidence 333222 899999999999999854
No 17
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.32 E-value=4.4e-13 Score=148.00 Aligned_cols=172 Identities=13% Similarity=0.186 Sum_probs=96.6
Q ss_pred eeccccceeEEEeccCceeeeeeeeeccCCCEEEEE-eCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEE
Q 003791 24 YEDQVGLMDWHQQYIGKVKHAVFHTQKTGRKRVVVS-TEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLS 102 (795)
Q Consensus 24 ~edq~G~~dW~~~~vG~~~~~~f~~~~~~~~~v~va-t~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs 102 (795)
+..+.|+..|+.+. +... ..|...++.+|++ +.+|.|+|+|++||+.+|+.....+..+...+....++.|+++
T Consensus 24 ~d~~tG~~~W~~~~-~~~~----s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~~~~~v~~g 98 (369)
T 2hz6_A 24 VSKRTGSIKWTLKE-DPVL----QVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRSSDGILYMG 98 (369)
T ss_dssp EETTTCCEEEEEEC-CCSC----CCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC-----CCCC
T ss_pred EECCCCCEEEEecC-CCce----ecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEecCCEEEEE
Confidence 34578999999987 5432 2233335555554 7899999999999999999876543222222112255677776
Q ss_pred ccCCeEEEEeCCCCcEeEEEeccCccccCCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEeccCcceeeee
Q 003791 103 SDGSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQ 181 (795)
Q Consensus 103 ~~g~~v~A~d~~tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~~~~~~~~ 181 (795)
+.++.+++||+.||+++|+........ ..+ .++.+++. .++.|+++|.++|+++|+++..... .
T Consensus 99 ~~dg~v~a~D~~tG~~~w~~~~~~~~~-----~~p------~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~~~----~ 163 (369)
T 2hz6_A 99 KKQDIWYVIDLLTGEKQQTLSSAFADS-----LSP------STSLLYLGRTEYTITMYDTKTRELRWNATYFDYA----A 163 (369)
T ss_dssp EEEEEEEEECCC---------------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEEEC----C
T ss_pred eCCCEEEEEECCCCcEEEEecCCCccc-----ccc------cCCEEEEEecCCEEEEEECCCCCEEEeEeccccc----C
Confidence 656789999999999999988654211 111 14667766 5899999999999999998653211 1
Q ss_pred EEEEecC-----CEEEEEEecCCceeEEEEEEcCCCceeeeeeee
Q 003791 182 VIQLDES-----DQIYVVGYAGSSQFHAYQINAMNGELLNHETAA 221 (795)
Q Consensus 182 vv~s~~~-----~~Vyvv~~~g~~~~~v~ald~~tG~~~w~~~v~ 221 (795)
. ...+ +.+|+.+.+| .++++|+.||+.+|+....
T Consensus 164 ~--~~~~~~~~~~~v~~~~~dg----~v~a~d~~tG~~~W~~~~~ 202 (369)
T 2hz6_A 164 S--LPEDDVDYKMSHFVSNGDG----LVVTVDSESGDVLWIQNYA 202 (369)
T ss_dssp B--CCCCCTTCCCCEEEEETSC----EEEEECTTTCCEEEEEECS
T ss_pred c--cccCCccccceEEEECCCC----EEEEEECCCCcEEEEecCC
Confidence 1 1122 6788766555 7999999999999999743
No 18
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.32 E-value=4.2e-11 Score=143.01 Aligned_cols=188 Identities=16% Similarity=0.253 Sum_probs=116.6
Q ss_pred ccccceeEEEeccCceee-------eeeeeeccCCCEEEEEeCCCEEEEEECcCCccceEEEcC-Cc---ceeeeeeeee
Q 003791 26 DQVGLMDWHQQYIGKVKH-------AVFHTQKTGRKRVVVSTEENVIASLDLRHGEIFWRHVLG-IN---DVVDGIDIAL 94 (795)
Q Consensus 26 dq~G~~dW~~~~vG~~~~-------~~f~~~~~~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~-~~---~~i~~l~~~~ 94 (795)
.+.|+..|++..-..... .....|...+++||+++.++.|+|||++||+++|++... .. ..+.+. +..
T Consensus 87 ~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~s-P~v 165 (689)
T 1yiq_A 87 ARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGA-PRV 165 (689)
T ss_dssp TTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSC-CEE
T ss_pred CCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCC-cEE
Confidence 468999999976221110 011123445889999999999999999999999999985 22 122223 234
Q ss_pred CCEEEEEEcc------CCeEEEEeCCCCcEeEEEeccCccccCC-------------------------ceecccccccc
Q 003791 95 GKYVITLSSD------GSTLRAWNLPDGQMVWESFLRGSKHSKP-------------------------LLLVPTNLKVD 143 (795)
Q Consensus 95 g~~~V~Vs~~------g~~v~A~d~~tG~llWe~~~~~~~~s~~-------------------------~~~~~~~~~~~ 143 (795)
.++.|+++.. ++.|+|||+.||+++|++......-... ..... ...+
T Consensus 166 ~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~--~~~d 243 (689)
T 1yiq_A 166 VNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDS--FAYD 243 (689)
T ss_dssp ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSC--EEEE
T ss_pred ECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccc--eeEc
Confidence 4556776542 3689999999999999998532100000 00000 0111
Q ss_pred -CCCeEEEEe-CC-------------------EEEEEECCCCcEEEEEeccCcc-----e-eeeeEEEEecCC----EEE
Q 003791 144 -KDSLILVSS-KG-------------------CLHAVSSIDGEILWTRDFAAES-----V-EVQQVIQLDESD----QIY 192 (795)
Q Consensus 144 -~~~~V~V~~-~g-------------------~l~ald~~tG~~~W~~~~~~~~-----~-~~~~vv~s~~~~----~Vy 192 (795)
..+.|++.. ++ .|+|+|++||+++|+++..... . .+.-+.+...++ .++
T Consensus 244 ~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~ 323 (689)
T 1yiq_A 244 PELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLM 323 (689)
T ss_dssp TTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEE
T ss_pred CCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEE
Confidence 146677753 43 4999999999999999864221 1 011111111233 344
Q ss_pred EEEecCCceeEEEEEEcCCCceeeeeee
Q 003791 193 VVGYAGSSQFHAYQINAMNGELLNHETA 220 (795)
Q Consensus 193 vv~~~g~~~~~v~ald~~tG~~~w~~~v 220 (795)
+.+.+| .+++||..||+++|...+
T Consensus 324 ~~~~~G----~l~~lD~~tG~~l~~~~~ 347 (689)
T 1yiq_A 324 QAPKNG----FFYVIDRATGELLSAKGI 347 (689)
T ss_dssp ECCTTS----EEEEEETTTCCEEEEEES
T ss_pred EECCCC----eEEEEECCCCCEeccccc
Confidence 433334 899999999999998753
No 19
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=99.30 E-value=1.9e-11 Score=132.99 Aligned_cols=162 Identities=12% Similarity=0.089 Sum_probs=102.4
Q ss_pred CCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeee---eeeCCEEEEEE-ccCCeEEEEeCCCCcEeEEEeccCcc
Q 003791 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGID---IALGKYVITLS-SDGSTLRAWNLPDGQMVWESFLRGSK 128 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~---~~~g~~~V~Vs-~~g~~v~A~d~~tG~llWe~~~~~~~ 128 (795)
++.||++|.+|.|+|||++||+++|+...+........+ ...++.++++. ..+|.|+|+|+.+|...|...+....
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 567999999999999999999999999886111111110 01233555553 35679999999999999988876433
Q ss_pred ccCCceeccc-cccc------cCCCeEEEE-eCCEEEEEECCCCcEEEEEeccCcce----eeeeEE---EE---ecCCE
Q 003791 129 HSKPLLLVPT-NLKV------DKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESV----EVQQVI---QL---DESDQ 190 (795)
Q Consensus 129 ~s~~~~~~~~-~~~~------~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~~~~----~~~~vv---~s---~~~~~ 190 (795)
. ..++... .... ..++.||+. .+|+++|+|+.||+++|++....+.. ....|. +. ..++.
T Consensus 90 ~--~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~ 167 (339)
T 2be1_A 90 S--TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENM 167 (339)
T ss_dssp T--TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCE
T ss_pred e--ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCe
Confidence 2 1112100 0011 036777886 59999999999999999998764321 011111 00 23467
Q ss_pred EEEEEecCCceeEEEEEEcCCCceeeeeeeec
Q 003791 191 IYVVGYAGSSQFHAYQINAMNGELLNHETAAF 222 (795)
Q Consensus 191 Vyvv~~~g~~~~~v~ald~~tG~~~w~~~v~~ 222 (795)
||+..... .+.+.+ ++|+ +|....+.
T Consensus 168 v~ig~~~y----~v~~~~-~sG~-~W~~~~s~ 193 (339)
T 2be1_A 168 IVIGKTIF----ELGIHS-YDGA-SYNVTYST 193 (339)
T ss_dssp EEEEEEEE----ECEECC-TTSC-CCCCEEEE
T ss_pred EEEecceE----EEEEEC-CCCC-eEEEeccc
Confidence 77755442 566666 7897 89987654
No 20
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.16 E-value=5.8e-08 Score=103.56 Aligned_cols=223 Identities=13% Similarity=0.138 Sum_probs=139.1
Q ss_pred eeEEEeccCceeeeeeeeeccCCCEEEEEeC-------CCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEE-
Q 003791 31 MDWHQQYIGKVKHAVFHTQKTGRKRVVVSTE-------ENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLS- 102 (795)
Q Consensus 31 ~dW~~~~vG~~~~~~f~~~~~~~~~v~vat~-------~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs- 102 (795)
..++...-+.+....|. ++++++|+++. ++.|..+|+++|+++|+...... ..++....++..++++
T Consensus 33 ~~~~~~~~~~~~~~~~s---~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~v~~ 107 (353)
T 3vgz_A 33 EMLRKAVGKGAYEMAYS---QQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLK--PFGATINNTTQTLWFGN 107 (353)
T ss_dssp CEEEEEEESSEEEEEEE---TTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSC--CCSEEEETTTTEEEEEE
T ss_pred hhhhhhhccCccceEEC---CCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCC--cceEEECCCCCEEEEEe
Confidence 35666654555544454 34678999884 56899999999999999987544 2333223334445554
Q ss_pred ccCCeEEEEeCCCCcEeEEEeccCcccc-CCceeccccccccC-CCeEEEEe---CCEEEEEECCCCcEEEEEeccCcce
Q 003791 103 SDGSTLRAWNLPDGQMVWESFLRGSKHS-KPLLLVPTNLKVDK-DSLILVSS---KGCLHAVSSIDGEILWTRDFAAESV 177 (795)
Q Consensus 103 ~~g~~v~A~d~~tG~llWe~~~~~~~~s-~~~~~~~~~~~~~~-~~~V~V~~---~g~l~ald~~tG~~~W~~~~~~~~~ 177 (795)
..++.|+.||..+|+.+|.......... ...+..+....... ++.+++.. ++.++.+|..+|+..+........
T Consensus 108 ~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~- 186 (353)
T 3vgz_A 108 TVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKM- 186 (353)
T ss_dssp TTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTT-
T ss_pred cCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCc-
Confidence 4467999999999999999987542210 00000000001111 35566653 788999999999999998733221
Q ss_pred eeeeEEEEecCCEEEEEEecCCceeEEEEEEcCCCceeeeeeeeccC--CcccceEEe-cCcEEEEEECCCCeEEEEEee
Q 003791 178 EVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHETAAFSG--GFVGDVALV-SSDTLVTLDTTRSILVTVSFK 254 (795)
Q Consensus 178 ~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~tG~~~w~~~v~~~~--~~~~~~~~v-g~~~lv~~d~~~~~L~v~~l~ 254 (795)
+..+..+..++.+|+.+..+ .+..+|+.+|+.++........ .....+.+- .++.+++.+...+.+++.|+.
T Consensus 187 -~~~~~~s~dg~~l~~~~~~~----~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~ 261 (353)
T 3vgz_A 187 -STGLALDSEGKRLYTTNADG----ELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTR 261 (353)
T ss_dssp -CCCCEEETTTTEEEEECTTS----EEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETT
T ss_pred -cceEEECCCCCEEEEEcCCC----eEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECC
Confidence 22232234566788765443 7889999999999887542221 111112222 455667777777899999998
Q ss_pred cCeeeeEEEee
Q 003791 255 NRKIAFQETHL 265 (795)
Q Consensus 255 sg~~~~~~~~l 265 (795)
+++. .+.+++
T Consensus 262 ~~~~-~~~~~~ 271 (353)
T 3vgz_A 262 NGNI-LAKVAA 271 (353)
T ss_dssp TCCE-EEEEEC
T ss_pred CCcE-EEEEEc
Confidence 8873 444443
No 21
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=99.05 E-value=4.4e-10 Score=122.25 Aligned_cols=189 Identities=8% Similarity=0.005 Sum_probs=111.2
Q ss_pred ccccceeEEEeccC-ceeeeeeeeec-cCCCEEEEE--eCCCEEEEEECcCCccceEEEcCCcceeeee----eeee---
Q 003791 26 DQVGLMDWHQQYIG-KVKHAVFHTQK-TGRKRVVVS--TEENVIASLDLRHGEIFWRHVLGINDVVDGI----DIAL--- 94 (795)
Q Consensus 26 dq~G~~dW~~~~vG-~~~~~~f~~~~-~~~~~v~va--t~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l----~~~~--- 94 (795)
.+.|+..|+.+.-. .|... ...+. ..++.+|+. +.+|.|+|+|+++|...|+..++.-.....+ .+..
T Consensus 27 ~~tG~~~W~~~~~~~~p~~~-~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~ 105 (339)
T 2be1_A 27 RRNGHIIWSIEPENFQPLIE-IQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDS 105 (339)
T ss_dssp TTTTEEEEEECGGGSCCSEE-CCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTTCSEEEECC------
T ss_pred CCCCcEEEEecCCccCCcEE-ecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccceeccccccCCCceeecc
Confidence 35899999998731 11111 11111 124567766 6899999999999999998887543111111 1223
Q ss_pred ----CCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccc--cCCceeccccccc---cCCCeEEEE-eCCEEEEEECCCC
Q 003791 95 ----GKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKH--SKPLLLVPTNLKV---DKDSLILVS-SKGCLHAVSSIDG 164 (795)
Q Consensus 95 ----g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~--s~~~~~~~~~~~~---~~~~~V~V~-~~g~l~ald~~tG 164 (795)
.++.||+++.+++++|+|+.||+++|++....+.. ......++..... +.++.|++. ....+++++ .+|
T Consensus 106 ~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ig~~~y~v~~~~-~sG 184 (339)
T 2be1_A 106 GKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVIGKTIFELGIHS-YDG 184 (339)
T ss_dssp ----CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEEEEEEEECEECC-TTS
T ss_pred cccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEEecceEEEEEEC-CCC
Confidence 78899988877899999999999999998765321 0001111100000 223556665 466777777 789
Q ss_pred cEEEEEeccCcce-eeee-EE---EEecCCEEEEEEecCCceeEEEEEEcCCCceee-eeeee
Q 003791 165 EILWTRDFAAESV-EVQQ-VI---QLDESDQIYVVGYAGSSQFHAYQINAMNGELLN-HETAA 221 (795)
Q Consensus 165 ~~~W~~~~~~~~~-~~~~-vv---~s~~~~~Vyvv~~~g~~~~~v~ald~~tG~~~w-~~~v~ 221 (795)
+ +|..+...-.- .... +. ....++.+|+.+.+| +++|+|+.+|+.+| +..+.
T Consensus 185 ~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~~~~~~dg----~v~A~d~~~G~~~W~~~~l~ 242 (339)
T 2be1_A 185 A-SYNVTYSTWQQNVLDVPLALQNTFSKDGMCIAPFRDK----SLLASDLDFRIARWVSPTFP 242 (339)
T ss_dssp C-CCCCEEEEEECCTTTHHHHTTCSSCSSSCCEEEETTT----EEEEECSTTCCEEEECCCCS
T ss_pred C-eEEEecccccccccccccccccccccCCcEEEECCCC----EEEEEECCCCcEEEEeecCC
Confidence 8 89875432100 0000 00 001235666655455 89999999999999 77443
No 22
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.04 E-value=6.6e-09 Score=110.38 Aligned_cols=202 Identities=18% Similarity=0.188 Sum_probs=126.7
Q ss_pred ccccceeEEEeccCceeeeeeeeeccCCCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccC
Q 003791 26 DQVGLMDWHQQYIGKVKHAVFHTQKTGRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDG 105 (795)
Q Consensus 26 dq~G~~dW~~~~vG~~~~~~f~~~~~~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g 105 (795)
|..|+..|+...-+.. ...+...++.||+++.++.|+++|++ |+..|+...+... +... ....++.+++++.+
T Consensus 84 d~~g~~~~~~~~~~~~----~~~~~~~~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~-~~~~-~~~~~g~l~vgt~~ 156 (330)
T 3hxj_A 84 NPDGTEKWRFDTKKAI----VSDFTIFEDILYVTSMDGHLYAINTD-GTEKWRFKTKKAI-YATP-IVSEDGTIYVGSND 156 (330)
T ss_dssp CCCGGGGGGSCC---------CCEEEETTEEEEECTTSEEEEECTT-SCEEEEEECSSCC-CSCC-EECTTSCEEEECTT
T ss_pred CCCCcEEEEEECCCCc----ccCceEECCEEEEEecCCEEEEEcCC-CCEEEEEcCCCce-eeee-EEcCCCEEEEEcCC
Confidence 3456666665432211 11122237889999999999999998 9999998876542 2222 23335667777766
Q ss_pred CeEEEEeCCCCcEeEEEeccCccccCCceeccccccccCCCeEEEEeCCEEEEEECCCCcEEEEEeccCcceeeeeEEEE
Q 003791 106 STLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSSKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQL 185 (795)
Q Consensus 106 ~~v~A~d~~tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s 185 (795)
+.++++|+. |+++|+........ ..+ ..+.++.+++.. +.|+++| .+|+.+|+...+.... ..+. .
T Consensus 157 ~~l~~~d~~-g~~~~~~~~~~~~~-~~~-------~~d~~g~l~v~t-~~l~~~d-~~g~~~~~~~~~~~~~--~~~~-~ 222 (330)
T 3hxj_A 157 NYLYAINPD-GTEKWRFKTNDAIT-SAA-------SIGKDGTIYFGS-DKVYAIN-PDGTEKWNFYAGYWTV--TRPA-I 222 (330)
T ss_dssp SEEEEECTT-SCEEEEEECSSCCC-SCC-------EECTTCCEEEES-SSEEEEC-TTSCEEEEECCSSCCC--SCCE-E
T ss_pred CEEEEECCC-CCEeEEEecCCCce-eee-------EEcCCCEEEEEe-CEEEEEC-CCCcEEEEEccCCcce--eceE-E
Confidence 789999998 99999998765432 111 233356788877 8999999 8999999987654322 1221 2
Q ss_pred ecCCEEEEEEecCCceeEEEEEEcCCCceeeeeeeeccCCcccceEEecCcEEEEEECCCCeEEEEEeecCe
Q 003791 186 DESDQIYVVGYAGSSQFHAYQINAMNGELLNHETAAFSGGFVGDVALVSSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 186 ~~~~~Vyvv~~~g~~~~~v~ald~~tG~~~w~~~v~~~~~~~~~~~~vg~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
..++.+|+.+..+ .++++| .+|+.+|+... +......+++..++.+.+. ...+.|+.++. +|+
T Consensus 223 ~~~g~l~v~t~~~----gl~~~~-~~g~~~~~~~~--~~~~~~~~~~~~~g~l~v~-t~~ggl~~~d~-~g~ 285 (330)
T 3hxj_A 223 SEDGTIYVTSLDG----HLYAIN-PDGTEKWRFKT--GKRIESSPVIGNTDTIYFG-SYDGHLYAINP-DGT 285 (330)
T ss_dssp CTTSCEEEEETTT----EEEEEC-TTSCEEEEEEC--SSCCCSCCEECTTSCEEEE-CTTCEEEEECT-TSC
T ss_pred CCCCeEEEEcCCC----eEEEEC-CCCCEeEEeeC--CCCccccceEcCCCeEEEe-cCCCCEEEECC-CCc
Confidence 3456888866555 688887 48899988753 2222233333323433333 23567888874 555
No 23
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.96 E-value=4.3e-08 Score=104.04 Aligned_cols=196 Identities=19% Similarity=0.264 Sum_probs=127.1
Q ss_pred cceeEEEeccCceeeeeeeeeccC-CCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCe
Q 003791 29 GLMDWHQQYIGKVKHAVFHTQKTG-RKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGST 107 (795)
Q Consensus 29 G~~dW~~~~vG~~~~~~f~~~~~~-~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~ 107 (795)
|+..|+...-+.. ...+..+ ++.+|+++.++.|+++|++ |+++|+..++... +..+ ....++.+++++ +.
T Consensus 126 g~~~~~~~~~~~~----~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~-~~~~-~~d~~g~l~v~t--~~ 196 (330)
T 3hxj_A 126 GTEKWRFKTKKAI----YATPIVSEDGTIYVGSNDNYLYAINPD-GTEKWRFKTNDAI-TSAA-SIGKDGTIYFGS--DK 196 (330)
T ss_dssp SCEEEEEECSSCC----CSCCEECTTSCEEEECTTSEEEEECTT-SCEEEEEECSSCC-CSCC-EECTTCCEEEES--SS
T ss_pred CCEEEEEcCCCce----eeeeEEcCCCEEEEEcCCCEEEEECCC-CCEeEEEecCCCc-eeee-EEcCCCEEEEEe--CE
Confidence 8888887753221 1122222 6789999999999999999 9999999886542 2222 233566787777 57
Q ss_pred EEEEeCCCCcEeEEEeccCccccCCceeccccccccCCCeEEEEe-CCEEEEEECCCCcEEEEEeccCcceeeeeEEEEe
Q 003791 108 LRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSS-KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLD 186 (795)
Q Consensus 108 v~A~d~~tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~~-~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~ 186 (795)
|+++| .+|+.+|+........ ..+ ..+.++.+++.. ++.|+++| .+|+..|++....... ..++ ..
T Consensus 197 l~~~d-~~g~~~~~~~~~~~~~-~~~-------~~~~~g~l~v~t~~~gl~~~~-~~g~~~~~~~~~~~~~--~~~~-~~ 263 (330)
T 3hxj_A 197 VYAIN-PDGTEKWNFYAGYWTV-TRP-------AISEDGTIYVTSLDGHLYAIN-PDGTEKWRFKTGKRIE--SSPV-IG 263 (330)
T ss_dssp EEEEC-TTSCEEEEECCSSCCC-SCC-------EECTTSCEEEEETTTEEEEEC-TTSCEEEEEECSSCCC--SCCE-EC
T ss_pred EEEEC-CCCcEEEEEccCCcce-ece-------EECCCCeEEEEcCCCeEEEEC-CCCCEeEEeeCCCCcc--ccce-Ec
Confidence 99999 8999999998754332 111 234356788875 79999998 5899999998754322 1121 13
Q ss_pred cCCEEEEEEecCCceeEEEEEEcCCCceeeeeeeeccCCcccceEEecCcEEEEEECCCCeEEEEEee
Q 003791 187 ESDQIYVVGYAGSSQFHAYQINAMNGELLNHETAAFSGGFVGDVALVSSDTLVTLDTTRSILVTVSFK 254 (795)
Q Consensus 187 ~~~~Vyvv~~~g~~~~~v~ald~~tG~~~w~~~v~~~~~~~~~~~~vg~~~lv~~d~~~~~L~v~~l~ 254 (795)
.++.+|+.+..| .++++|+ +|+.+|..... ......++.-.++.+.+. ..+|.++.....
T Consensus 264 ~~g~l~v~t~~g----gl~~~d~-~g~~~~~~~~~--~~~~~~~~~d~~g~l~~g-t~~G~~~~~~~~ 323 (330)
T 3hxj_A 264 NTDTIYFGSYDG----HLYAINP-DGTEKWNFETG--SWIIATPVIDENGTIYFG-TRNGKFYALFNL 323 (330)
T ss_dssp TTSCEEEECTTC----EEEEECT-TSCEEEEEECS--SCCCSCCEECTTCCEEEE-CTTSCEEEEEC-
T ss_pred CCCeEEEecCCC----CEEEECC-CCcEEEEEEcC--CccccceEEcCCCEEEEE-cCCCeEEEEecc
Confidence 478899866555 6999997 89999988642 222223333122333222 235666655544
No 24
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.92 E-value=1.1e-06 Score=93.42 Aligned_cols=192 Identities=13% Similarity=0.130 Sum_probs=128.8
Q ss_pred CCCEEEEEeC-CCEEEEEECcCCccceEEEcCCcce--------eeeeeeeeCCEEEEEEc--cCCeEEEEeCCCCcEeE
Q 003791 52 GRKRVVVSTE-ENVIASLDLRHGEIFWRHVLGINDV--------VDGIDIALGKYVITLSS--DGSTLRAWNLPDGQMVW 120 (795)
Q Consensus 52 ~~~~v~vat~-~g~l~ALn~~tG~ivWR~~l~~~~~--------i~~l~~~~g~~~V~Vs~--~g~~v~A~d~~tG~llW 120 (795)
+++.+|+++. ++.|..+|+++|+++|+..+..... ..++.....++.+++++ .++.|+.||..+|+..+
T Consensus 99 dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~ 178 (353)
T 3vgz_A 99 TTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKT 178 (353)
T ss_dssp TTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEE
T ss_pred CCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEE
Confidence 4566888766 6899999999999999998864321 22332233444566554 35789999999999999
Q ss_pred EEeccCccccCCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEeccCc--ceeeeeEEEEecCCEEEEEEec
Q 003791 121 ESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAE--SVEVQQVIQLDESDQIYVVGYA 197 (795)
Q Consensus 121 e~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~~--~~~~~~vv~s~~~~~Vyvv~~~ 197 (795)
.....+... ..+.+.+ + ++.+++. .++.+..+|..+|+..|....+.. ...+..+..+..++.+|+.+..
T Consensus 179 ~~~~~~~~~-~~~~~s~-----d-g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 251 (353)
T 3vgz_A 179 AIQNTGKMS-TGLALDS-----E-GKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSK 251 (353)
T ss_dssp EECCCCTTC-CCCEEET-----T-TTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS
T ss_pred EecCCCCcc-ceEEECC-----C-CCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC
Confidence 987433211 1222222 2 3556666 488999999999999999887432 1123334334456678876654
Q ss_pred CCceeEEEEEEcCCCceeeeeeeeccCCcccceEEe-cCcEEEEEECCCCeEEEEEeecCe
Q 003791 198 GSSQFHAYQINAMNGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 198 g~~~~~v~ald~~tG~~~w~~~v~~~~~~~~~~~~v-g~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
++ .+..+|+.+|+.++......+ ..+.+- .++.+++.+...+.+.+.|+.+++
T Consensus 252 ~~---~v~~~d~~~~~~~~~~~~~~~----~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~ 305 (353)
T 3vgz_A 252 AA---EVLVVDTRNGNILAKVAAPES----LAVLFNPARNEAYVTHRQAGKVSVIDAKSYK 305 (353)
T ss_dssp SS---EEEEEETTTCCEEEEEECSSC----CCEEEETTTTEEEEEETTTTEEEEEETTTTE
T ss_pred CC---EEEEEECCCCcEEEEEEcCCC----ceEEECCCCCEEEEEECCCCeEEEEECCCCe
Confidence 33 789999999999887764332 123332 345566777667899999998887
No 25
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.73 E-value=2.1e-06 Score=92.33 Aligned_cols=171 Identities=9% Similarity=-0.037 Sum_probs=114.2
Q ss_pred eeeccccceeEEEeccCceeeeeeeeeccCCCEEEEEe-CCCEEEEEECcCCccceEEEcCCcc----eeeeeeeeeCCE
Q 003791 23 LYEDQVGLMDWHQQYIGKVKHAVFHTQKTGRKRVVVST-EENVIASLDLRHGEIFWRHVLGIND----VVDGIDIALGKY 97 (795)
Q Consensus 23 l~edq~G~~dW~~~~vG~~~~~~f~~~~~~~~~v~vat-~~g~l~ALn~~tG~ivWR~~l~~~~----~i~~l~~~~g~~ 97 (795)
++.-+.++...+....+.|....+. .++++|+++ .++.|..+|+++|++.++..+.... ...++. ..++
T Consensus 68 viD~~t~~~~~~i~~~~~p~~i~~~----~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~--~~~~ 141 (328)
T 3dsm_A 68 AIDINTFKEVGRITGFTSPRYIHFL----SDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMV--QYGK 141 (328)
T ss_dssp EEETTTCCEEEEEECCSSEEEEEEE----ETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEE--EETT
T ss_pred EEECcccEEEEEcCCCCCCcEEEEe----CCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEE--EECC
Confidence 3444556665555443444443442 256899999 7899999999999999998876511 123442 2455
Q ss_pred EEEEEc--cCCeEEEEeCCCCcEeEEEeccCccccCCceeccccccccCCCeEEEEe--C----------CEEEEEECCC
Q 003791 98 VITLSS--DGSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSS--K----------GCLHAVSSID 163 (795)
Q Consensus 98 ~V~Vs~--~g~~v~A~d~~tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~~--~----------g~l~ald~~t 163 (795)
.++|+. .++.|..+|+.+|+++++....... ..+ ..+.++.+++.. + +.|+.+|.++
T Consensus 142 ~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p--~~i-------~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t 212 (328)
T 3dsm_A 142 YVYVNCWSYQNRILKIDTETDKVVDELTIGIQP--TSL-------VMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAET 212 (328)
T ss_dssp EEEEEECTTCCEEEEEETTTTEEEEEEECSSCB--CCC-------EECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTT
T ss_pred EEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCc--cce-------EEcCCCCEEEEECCCccCCccccCCceEEEEECCC
Confidence 666664 3679999999999999998764322 111 223356777763 2 6899999999
Q ss_pred CcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcCCCcee
Q 003791 164 GEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELL 215 (795)
Q Consensus 164 G~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~tG~~~ 215 (795)
|++..+...+.... |..+..+..++.+|+.. + .++.+|+.+|+..
T Consensus 213 ~~v~~~~~~~~g~~-p~~la~~~d~~~lyv~~--~----~v~~~d~~t~~~~ 257 (328)
T 3dsm_A 213 FTVEKQFKFKLGDW-PSEVQLNGTRDTLYWIN--N----DIWRMPVEADRVP 257 (328)
T ss_dssp TEEEEEEECCTTCC-CEEEEECTTSCEEEEES--S----SEEEEETTCSSCC
T ss_pred CeEEEEEecCCCCC-ceeEEEecCCCEEEEEc--c----EEEEEECCCCcee
Confidence 99988887654322 44453233467788742 2 5889999999875
No 26
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.61 E-value=7.4e-06 Score=88.07 Aligned_cols=189 Identities=9% Similarity=0.027 Sum_probs=121.6
Q ss_pred CCEEEEEeC-CCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEc-cCCeEEEEeCCCCcEeEEEeccCcccc
Q 003791 53 RKRVVVSTE-ENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSS-DGSTLRAWNLPDGQMVWESFLRGSKHS 130 (795)
Q Consensus 53 ~~~v~vat~-~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~-~g~~v~A~d~~tG~llWe~~~~~~~~s 130 (795)
++++|+++. +|.|..+|++||+++++...... ..++....+ +.+|++. .++.|..||+.+|++.++..+......
T Consensus 53 ~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~--p~~i~~~~~-g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~ 129 (328)
T 3dsm_A 53 DGIGWIVVNNSHVIFAIDINTFKEVGRITGFTS--PRYIHFLSD-EKAYVTQIWDYRIFIINPKTYEITGYIECPDMDME 129 (328)
T ss_dssp TTEEEEEEGGGTEEEEEETTTCCEEEEEECCSS--EEEEEEEET-TEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTT
T ss_pred CCEEEEEEcCCCEEEEEECcccEEEEEcCCCCC--CcEEEEeCC-CeEEEEECCCCeEEEEECCCCeEEEEEEcCCcccc
Confidence 678998887 58999999999999999853222 334422234 4677776 678999999999999999887541100
Q ss_pred -CCceeccccccccCCCeEEEEe---CCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCc------
Q 003791 131 -KPLLLVPTNLKVDKDSLILVSS---KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSS------ 200 (795)
Q Consensus 131 -~~~~~~~~~~~~~~~~~V~V~~---~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~------ 200 (795)
..+.-+ ..+ ++.++|.. ++.|..+|.++|++.++...... |..+. ...++.+|+.+.....
T Consensus 130 ~~~p~~i----~~~-~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~---p~~i~-~~~dG~l~v~~~~~~~~~~~~~ 200 (328)
T 3dsm_A 130 SGSTEQM----VQY-GKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQ---PTSLV-MDKYNKMWTITDGGYEGSPYGY 200 (328)
T ss_dssp TCBCCCE----EEE-TTEEEEEECTTCCEEEEEETTTTEEEEEEECSSC---BCCCE-ECTTSEEEEEBCCBCTTCSSCB
T ss_pred CCCcceE----EEE-CCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCC---ccceE-EcCCCCEEEEECCCccCCcccc
Confidence 000111 222 67788863 78999999999999998876432 33332 2356788876543200
Q ss_pred -eeEEEEEEcCCCceeeeeeeeccCCcccceEEe-cCcEEEEEECCCCeEEEEEeecCe
Q 003791 201 -QFHAYQINAMNGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 201 -~~~v~ald~~tG~~~w~~~v~~~~~~~~~~~~v-g~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
.-.++.+|+++|+......+.... -.....+- .++.+++.+. .++++|+.+++
T Consensus 201 ~~~~v~~id~~t~~v~~~~~~~~g~-~p~~la~~~d~~~lyv~~~---~v~~~d~~t~~ 255 (328)
T 3dsm_A 201 EAPSLYRIDAETFTVEKQFKFKLGD-WPSEVQLNGTRDTLYWINN---DIWRMPVEADR 255 (328)
T ss_dssp CCCEEEEEETTTTEEEEEEECCTTC-CCEEEEECTTSCEEEEESS---SEEEEETTCSS
T ss_pred CCceEEEEECCCCeEEEEEecCCCC-CceeEEEecCCCEEEEEcc---EEEEEECCCCc
Confidence 137999999999987665432111 11112222 2456666653 78888887776
No 27
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.57 E-value=0.00011 Score=79.34 Aligned_cols=214 Identities=11% Similarity=0.138 Sum_probs=133.2
Q ss_pred ceeeccccceeEEEeccCceeeeeeeeeccCCCEEEEEe-CCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEE
Q 003791 22 SLYEDQVGLMDWHQQYIGKVKHAVFHTQKTGRKRVVVST-EENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVIT 100 (795)
Q Consensus 22 Al~edq~G~~dW~~~~vG~~~~~~f~~~~~~~~~v~vat-~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~ 100 (795)
-++.-+.|+..+..+.-+.+....|. ++++.+|++. .++.|..+|.++|+++++...... +..+.....+..++
T Consensus 15 ~v~d~~~~~~~~~~~~~~~~~~~~~s---~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~--v~~~~~spdg~~l~ 89 (391)
T 1l0q_A 15 SVIDVTSNKVTATIPVGSNPMGAVIS---PDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSS--PQGVAVSPDGKQVY 89 (391)
T ss_dssp EEEETTTTEEEEEEECSSSEEEEEEC---TTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSS--EEEEEECTTSSEEE
T ss_pred EEEECCCCeEEEEeecCCCcceEEEC---CCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCC--ccceEECCCCCEEE
Confidence 44555556665555443344333443 3355676554 789999999999999998877653 44443333344454
Q ss_pred EE-ccCCeEEEEeCCCCcEeEEEeccCccccCCceeccccccccCCCeEEEE--eCCEEEEEECCCCcEEEEEeccCcce
Q 003791 101 LS-SDGSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS--SKGCLHAVSSIDGEILWTRDFAAESV 177 (795)
Q Consensus 101 Vs-~~g~~v~A~d~~tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~--~~g~l~ald~~tG~~~W~~~~~~~~~ 177 (795)
++ ..++.|+.||..+|+.++......... .+.+.+ + ++.+++. .++.|+.+|..+|+..+.......
T Consensus 90 ~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~--~~~~s~-----d-g~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-- 159 (391)
T 1l0q_A 90 VTNMASSTLSVIDTTSNTVAGTVKTGKSPL--GLALSP-----D-GKKLYVTNNGDKTVSVINTVTKAVINTVSVGRS-- 159 (391)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECSSSEE--EEEECT-----T-SSEEEEEETTTTEEEEEETTTTEEEEEEECCSS--
T ss_pred EEECCCCEEEEEECCCCeEEEEEeCCCCcc--eEEECC-----C-CCEEEEEeCCCCEEEEEECCCCcEEEEEecCCC--
Confidence 44 456899999999999998887654321 111211 2 3445454 389999999999999988876432
Q ss_pred eeeeEEEEecCCEEEEEEecCCceeEEEEEEcCCCceeeeeeeeccCCcccceEEe-cCcEEEEEEC--CCCeEEEEEee
Q 003791 178 EVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHETAAFSGGFVGDVALV-SSDTLVTLDT--TRSILVTVSFK 254 (795)
Q Consensus 178 ~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~tG~~~w~~~v~~~~~~~~~~~~v-g~~~lv~~d~--~~~~L~v~~l~ 254 (795)
+..+..+..+..+|+.+..++ .+..+|+.+|+.+..... ..... .+.+- .+..+++.+. ..+.+++.|+.
T Consensus 160 -~~~~~~~~dg~~l~~~~~~~~---~v~~~d~~~~~~~~~~~~--~~~~~-~~~~~~~g~~l~~~~~~~~~~~v~~~d~~ 232 (391)
T 1l0q_A 160 -PKGIAVTPDGTKVYVANFDSM---SISVIDTVTNSVIDTVKV--EAAPS-GIAVNPEGTKAYVTNVDKYFNTVSMIDTG 232 (391)
T ss_dssp -EEEEEECTTSSEEEEEETTTT---EEEEEETTTTEEEEEEEC--SSEEE-EEEECTTSSEEEEEEECSSCCEEEEEETT
T ss_pred -cceEEECCCCCEEEEEeCCCC---EEEEEECCCCeEEEEEec--CCCcc-ceEECCCCCEEEEEecCcCCCcEEEEECC
Confidence 223332334556776554443 788999999987765532 11111 12222 3345555543 46889999998
Q ss_pred cCe
Q 003791 255 NRK 257 (795)
Q Consensus 255 sg~ 257 (795)
+++
T Consensus 233 ~~~ 235 (391)
T 1l0q_A 233 TNK 235 (391)
T ss_dssp TTE
T ss_pred CCe
Confidence 876
No 28
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.57 E-value=0.00018 Score=77.77 Aligned_cols=183 Identities=10% Similarity=0.148 Sum_probs=120.2
Q ss_pred EEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEE-EccCCeEEEEeCCCCcEeEEEeccCccccCCce
Q 003791 56 VVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITL-SSDGSTLRAWNLPDGQMVWESFLRGSKHSKPLL 134 (795)
Q Consensus 56 v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~V-s~~g~~v~A~d~~tG~llWe~~~~~~~~s~~~~ 134 (795)
+++++.++.|..+|.++|+.+++...... +..+....++..+++ ++.++.|+.||..+|++++......... .+.
T Consensus 5 ~vs~~~d~~v~v~d~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~--~~~ 80 (391)
T 1l0q_A 5 YIANSESDNISVIDVTSNKVTATIPVGSN--PMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQ--GVA 80 (391)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECSSS--EEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEE--EEE
T ss_pred EEEcCCCCEEEEEECCCCeEEEEeecCCC--cceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCcc--ceE
Confidence 44566789999999999999998776544 334423334445544 4456799999999999999988765321 222
Q ss_pred eccccccccCCCeEEEEe--CCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcCCC
Q 003791 135 LVPTNLKVDKDSLILVSS--KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNG 212 (795)
Q Consensus 135 ~~~~~~~~~~~~~V~V~~--~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~tG 212 (795)
+.+ + ++.+++.. ++.|+.+|..+|+..+....... +..+..+..+..+|+.+...+ .+..+|+.+|
T Consensus 81 ~sp-----d-g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~---~~~~~~s~dg~~l~~~~~~~~---~v~~~d~~~~ 148 (391)
T 1l0q_A 81 VSP-----D-GKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKS---PLGLALSPDGKKLYVTNNGDK---TVSVINTVTK 148 (391)
T ss_dssp ECT-----T-SSEEEEEETTTTEEEEEETTTTEEEEEEECSSS---EEEEEECTTSSEEEEEETTTT---EEEEEETTTT
T ss_pred ECC-----C-CCEEEEEECCCCEEEEEECCCCeEEEEEeCCCC---cceEEECCCCCEEEEEeCCCC---EEEEEECCCC
Confidence 222 2 34565653 69999999999999988775432 233332334556766654333 7889999999
Q ss_pred ceeeeeeeeccCCcccceEEe-cCcEEEEEECCCCeEEEEEeecCe
Q 003791 213 ELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 213 ~~~w~~~v~~~~~~~~~~~~v-g~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
+.+...... ... ..+.+- .++.+++.....+.+++.|+.+++
T Consensus 149 ~~~~~~~~~--~~~-~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~ 191 (391)
T 1l0q_A 149 AVINTVSVG--RSP-KGIAVTPDGTKVYVANFDSMSISVIDTVTNS 191 (391)
T ss_dssp EEEEEEECC--SSE-EEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred cEEEEEecC--CCc-ceEEECCCCCEEEEEeCCCCEEEEEECCCCe
Confidence 988766432 122 112222 344555555567889999998876
No 29
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.48 E-value=0.00045 Score=79.82 Aligned_cols=191 Identities=13% Similarity=0.032 Sum_probs=119.8
Q ss_pred CCEEEEEe-CCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeC--CCCcEeEEEeccCccc
Q 003791 53 RKRVVVST-EENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNL--PDGQMVWESFLRGSKH 129 (795)
Q Consensus 53 ~~~v~vat-~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~--~tG~llWe~~~~~~~~ 129 (795)
++++|++. .++.|..+|..+|+++.+...... ..++...-++..+++++.++.|+.||. .+|+.+-+........
T Consensus 148 ~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~ 225 (543)
T 1nir_A 148 PNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEAR 225 (543)
T ss_dssp GGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEE
T ss_pred CCEEEEEEcCCCeEEEEECCCceEEEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcc
Confidence 45666554 578999999999999988876544 333323345567777766689999999 8999988777543221
Q ss_pred cCCceeccccccc----cCCCeEEEE--eCCEEEEEECCCCcEEEEEeccCc---------ceeeeeEEEEecCCEEEEE
Q 003791 130 SKPLLLVPTNLKV----DKDSLILVS--SKGCLHAVSSIDGEILWTRDFAAE---------SVEVQQVIQLDESDQIYVV 194 (795)
Q Consensus 130 s~~~~~~~~~~~~----~~~~~V~V~--~~g~l~ald~~tG~~~W~~~~~~~---------~~~~~~vv~s~~~~~Vyvv 194 (795)
.+.. .. + ++.+++. .++.+..+|..+++++.+...... ...+..+..+..+..+|+
T Consensus 226 -----~va~--sp~~~~d-g~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~v- 296 (543)
T 1nir_A 226 -----SVES--SKFKGYE-DRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIV- 296 (543)
T ss_dssp -----EEEE--CCSTTCT-TTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEE-
T ss_pred -----eEEe--CCCcCCC-CCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEE-
Confidence 1110 22 2 4667776 389999999999999988865321 101233432333445554
Q ss_pred EecCCceeEEEEEEcCCCceeeeeeeeccCCcccceEEe-cCcEEEEEECCCCeEEEEEeecCe
Q 003791 195 GYAGSSQFHAYQINAMNGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 195 ~~~g~~~~~v~ald~~tG~~~w~~~v~~~~~~~~~~~~v-g~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
+..+. .++..+|..+++.+....+.....+. ...+- .+.++++.....+.+.+.|+.+++
T Consensus 297 s~~~~--g~i~vvd~~~~~~l~~~~i~~~~~~~-~~~~spdg~~l~va~~~~~~v~v~D~~tg~ 357 (543)
T 1nir_A 297 NVKET--GKVLLVNYKDIDNLTVTSIGAAPFLH-DGGWDSSHRYFMTAANNSNKVAVIDSKDRR 357 (543)
T ss_dssp EETTT--TEEEEEECTTSSSCEEEEEECCSSCC-CEEECTTSCEEEEEEGGGTEEEEEETTTTE
T ss_pred EECCC--CeEEEEEecCCCcceeEEeccCcCcc-CceECCCCCEEEEEecCCCeEEEEECCCCe
Confidence 44332 17888899888766533333222221 22232 344555555556789999999987
No 30
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.44 E-value=0.00045 Score=75.74 Aligned_cols=180 Identities=13% Similarity=0.060 Sum_probs=103.6
Q ss_pred EEEEEECcCC--ccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccc-cCCceeccccc
Q 003791 64 VIASLDLRHG--EIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKH-SKPLLLVPTNL 140 (795)
Q Consensus 64 ~l~ALn~~tG--~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~-s~~~~~~~~~~ 140 (795)
.|+.+|+++| +.+.+...... +..+....++.+++.++.++.|+.||..+|+............ ......+
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~~~--~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~---- 175 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTGFQ--PKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETI---- 175 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECSSC--BCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEE----
T ss_pred EEEEECCCCCcceEEEEEcCCCC--ceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEE----
Confidence 7888888777 44444433322 2233222344555545556789999999999886443211000 0001111
Q ss_pred cccCCCeEEEE--eCCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcCCCceeeee
Q 003791 141 KVDKDSLILVS--SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHE 218 (795)
Q Consensus 141 ~~~~~~~V~V~--~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~tG~~~w~~ 218 (795)
....++.+++. .++.+..+|..+|+..++....... +..+..+..+..+|+.+..++ .+..+|+.+|+.++..
T Consensus 176 ~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~---~i~~~d~~~~~~~~~~ 250 (433)
T 3bws_A 176 SIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKW--SKILLYDPIRDLVYCSNWISE---DISVIDRKTKLEIRKT 250 (433)
T ss_dssp EEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSS--EEEEEEETTTTEEEEEETTTT---EEEEEETTTTEEEEEC
T ss_pred EEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCC--eeEEEEcCCCCEEEEEecCCC---cEEEEECCCCcEEEEe
Confidence 12224566665 3799999999999999998743322 223322345667777664433 7899999999987765
Q ss_pred eeeccCCcccceEEe-cCcEEEEEEC-------CCCeEEEEEeecCe
Q 003791 219 TAAFSGGFVGDVALV-SSDTLVTLDT-------TRSILVTVSFKNRK 257 (795)
Q Consensus 219 ~v~~~~~~~~~~~~v-g~~~lv~~d~-------~~~~L~v~~l~sg~ 257 (795)
.. ...+. .+.+- .++.+++... ..+.+++.++.+++
T Consensus 251 ~~--~~~~~-~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~ 294 (433)
T 3bws_A 251 DK--IGLPR-GLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEK 294 (433)
T ss_dssp CC--CSEEE-EEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTE
T ss_pred cC--CCCce-EEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCc
Confidence 32 11111 11221 3345555442 24678889988876
No 31
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.40 E-value=0.00077 Score=74.60 Aligned_cols=182 Identities=12% Similarity=0.088 Sum_probs=120.7
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccC
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~ 131 (795)
+++.+++++.+|.|...|.++|+.+++..-.. ..+..+ ...++.++.++.++.|+.||..+|+.+..........
T Consensus 128 ~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~-~~v~~~--~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v-- 202 (445)
T 2ovr_B 128 CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHT-GGVWSS--QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTV-- 202 (445)
T ss_dssp ETTEEEEEETTSCEEEEETTTCCEEEECCCCS-SCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCE--
T ss_pred cCCEEEEEECCCcEEEEECCCCcEEEEEcCCC-CCEEEE--EecCCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcE--
Confidence 36789999999999999999999887754322 234444 2234455556667799999999999998887554332
Q ss_pred CceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcC
Q 003791 132 PLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAM 210 (795)
Q Consensus 132 ~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~ 210 (795)
..+ ..+ ++.+++. .+|.+...|..+|+..+......... ..+ ...++.+++.+.+| .+..+|..
T Consensus 203 --~~~----~~~-~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v--~~~--~~~~~~l~~~~~dg----~i~iwd~~ 267 (445)
T 2ovr_B 203 --RCM----HLH-EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAV--RCV--QYDGRRVVSGAYDF----MVKVWDPE 267 (445)
T ss_dssp --EEE----EEE-TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCE--EEE--EECSSCEEEEETTS----CEEEEEGG
T ss_pred --EEE----Eec-CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccE--EEE--EECCCEEEEEcCCC----EEEEEECC
Confidence 111 122 3455555 49999999999999999886544332 122 23455555555455 68889999
Q ss_pred CCceeeeeeeeccCCcccceEEecCcEEEEEECCCCeEEEEEeecCe
Q 003791 211 NGELLNHETAAFSGGFVGDVALVSSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 211 tG~~~w~~~v~~~~~~~~~~~~vg~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
+|+.+.+..... ..+ .++-..+..+++.. ..+.+.+.|+.+++
T Consensus 268 ~~~~~~~~~~~~-~~v--~~~~~~~~~l~~~~-~d~~i~i~d~~~~~ 310 (445)
T 2ovr_B 268 TETCLHTLQGHT-NRV--YSLQFDGIHVVSGS-LDTSIRVWDVETGN 310 (445)
T ss_dssp GTEEEEEECCCS-SCE--EEEEECSSEEEEEE-TTSCEEEEETTTCC
T ss_pred CCcEeEEecCCC-Cce--EEEEECCCEEEEEe-CCCeEEEEECCCCC
Confidence 999887764111 111 12222556666665 45889999998877
No 32
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.35 E-value=0.00017 Score=75.59 Aligned_cols=139 Identities=11% Similarity=0.066 Sum_probs=87.4
Q ss_pred ceeeccccceeEEEeccC---ceeeeeeeeeccCCCEEEEEeC-CCEEEEEECcCCccceEEEcCCcc----eeeeeeee
Q 003791 22 SLYEDQVGLMDWHQQYIG---KVKHAVFHTQKTGRKRVVVSTE-ENVIASLDLRHGEIFWRHVLGIND----VVDGIDIA 93 (795)
Q Consensus 22 Al~edq~G~~dW~~~~vG---~~~~~~f~~~~~~~~~v~vat~-~g~l~ALn~~tG~ivWR~~l~~~~----~i~~l~~~ 93 (795)
.++.-+.|+..+....-+ .+....|. ++++.+|++.. ++.|..+|+.+|+++++..++... .+..+...
T Consensus 14 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~s---~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s 90 (337)
T 1pby_B 14 VVIDTEKMAVDKVITIADAGPTPMVPMVA---PGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALS 90 (337)
T ss_dssp EEEETTTTEEEEEEECTTCTTCCCCEEEC---TTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEEC
T ss_pred EEEECCCCcEEEEEEcCCCCCCccceEEc---CCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEEC
Confidence 445555667666665433 34444443 33557777664 689999999999999998875421 12233222
Q ss_pred eCCEEEEEEc------------cCCeEEEEeCCCCcEeEEEeccCccccCCceeccccccccCCCeEEEEeCCEEEEEEC
Q 003791 94 LGKYVITLSS------------DGSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSSKGCLHAVSS 161 (795)
Q Consensus 94 ~g~~~V~Vs~------------~g~~v~A~d~~tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~~~g~l~ald~ 161 (795)
.++..++++. .++.|+.||..+|+.++........ ..+.+.+ + ++.+++. ++.++.+|.
T Consensus 91 ~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~--~~~~~s~-----d-g~~l~~~-~~~i~~~d~ 161 (337)
T 1pby_B 91 PDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQI--TMLAWAR-----D-GSKLYGL-GRDLHVMDP 161 (337)
T ss_dssp TTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSC--CCEEECT-----T-SSCEEEE-SSSEEEEET
T ss_pred CCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCc--ceeEECC-----C-CCEEEEe-CCeEEEEEC
Confidence 3344555553 3479999999999999988764332 1222222 2 2335544 778999999
Q ss_pred CCCcEEEEEec
Q 003791 162 IDGEILWTRDF 172 (795)
Q Consensus 162 ~tG~~~W~~~~ 172 (795)
.+|++......
T Consensus 162 ~~~~~~~~~~~ 172 (337)
T 1pby_B 162 EAGTLVEDKPI 172 (337)
T ss_dssp TTTEEEEEECS
T ss_pred CCCcEeeeeec
Confidence 98888776654
No 33
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.28 E-value=0.00025 Score=74.39 Aligned_cols=187 Identities=10% Similarity=0.054 Sum_probs=125.0
Q ss_pred CCEEEEEeC---CCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEc-cCCeEEEEeCCCCcEeEEEecc-Cc
Q 003791 53 RKRVVVSTE---ENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSS-DGSTLRAWNLPDGQMVWESFLR-GS 127 (795)
Q Consensus 53 ~~~v~vat~---~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~-~g~~v~A~d~~tG~llWe~~~~-~~ 127 (795)
++++|+++. .+.|..+|++||+++=+..++...-..++. ..+ +.+|++. .++.+..+|++|++++-+.+.. .+
T Consensus 31 dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~-~~g-~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~ 108 (266)
T 2iwa_A 31 NDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLT-LLN-EKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKD 108 (266)
T ss_dssp TTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEE-EET-TEEEEEETTCSEEEEEETTTTEEEEEEECCSSS
T ss_pred CCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEE-EeC-CEEEEEEecCCEEEEEECCCCcEEEEEECCCCC
Confidence 379999986 589999999999999998886542122341 234 4566554 5679999999999999998865 22
Q ss_pred cccCCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEeccCcce---eeeeEEEEecCCEEEEEEecCCceeE
Q 003791 128 KHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESV---EVQQVIQLDESDQIYVVGYAGSSQFH 203 (795)
Q Consensus 128 ~~s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~~~~---~~~~vv~s~~~~~Vyvv~~~g~~~~~ 203 (795)
. ..+. .+ ++.+++. .++.|+.+|.++.++.=+........ .+..+. ..++.+|+-....+ .
T Consensus 109 g----~glt-----~D-g~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele--~~dg~lyvn~~~~~---~ 173 (266)
T 2iwa_A 109 G----WGLA-----TD-GKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELE--YINGEVWANIWQTD---C 173 (266)
T ss_dssp C----CEEE-----EC-SSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEE--EETTEEEEEETTSS---E
T ss_pred e----EEEE-----EC-CCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEE--EECCEEEEecCCCC---e
Confidence 1 1222 23 4567776 47899999999999887776543211 122332 23679997654444 7
Q ss_pred EEEEEcCCCceeeeeeeecc--C---------CcccceEEe-cCcEEEEEECCCCeEEEEEeecC
Q 003791 204 AYQINAMNGELLNHETAAFS--G---------GFVGDVALV-SSDTLVTLDTTRSILVTVSFKNR 256 (795)
Q Consensus 204 v~ald~~tG~~~w~~~v~~~--~---------~~~~~~~~v-g~~~lv~~d~~~~~L~v~~l~sg 256 (795)
+..+|++||+++....+... . .......+- +++.++++....+.++++++...
T Consensus 174 V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 174 IARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred EEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 99999999999888765411 0 111122232 34566677767778888887654
No 34
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.23 E-value=0.00085 Score=70.15 Aligned_cols=150 Identities=9% Similarity=0.041 Sum_probs=99.1
Q ss_pred EEEEEeCCCEEEEEECcCCccceEEEcCCcc-eeeeeeeeeCCEEEEE-EccCCeEEEEeCCCCcEeEEEeccCcc----
Q 003791 55 RVVVSTEENVIASLDLRHGEIFWRHVLGIND-VVDGIDIALGKYVITL-SSDGSTLRAWNLPDGQMVWESFLRGSK---- 128 (795)
Q Consensus 55 ~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~-~i~~l~~~~g~~~V~V-s~~g~~v~A~d~~tG~llWe~~~~~~~---- 128 (795)
.+++++.++.|..+|+.+|+++++..++... ....+....++..+++ +..++.|+.||..+|+.+++.......
T Consensus 3 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~ 82 (337)
T 1pby_B 3 YILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVK 82 (337)
T ss_dssp EEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEE
T ss_pred EEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccc
Confidence 5778888999999999999999998876521 1233322233334544 445679999999999999988764310
Q ss_pred ccCCceeccccccccCCCeEEEEe-------------CCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEE
Q 003791 129 HSKPLLLVPTNLKVDKDSLILVSS-------------KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVG 195 (795)
Q Consensus 129 ~s~~~~~~~~~~~~~~~~~V~V~~-------------~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~ 195 (795)
....+.+.+ + ++.+++.. ++.+..+|..+|+..+....+.. +..+..+..+..+|+.
T Consensus 83 ~~~~~~~s~-----d-g~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~---~~~~~~s~dg~~l~~~- 152 (337)
T 1pby_B 83 SLFGAALSP-----D-GKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQ---ITMLAWARDGSKLYGL- 152 (337)
T ss_dssp CTTCEEECT-----T-SSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSS---CCCEEECTTSSCEEEE-
T ss_pred cccceEECC-----C-CCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCC---cceeEECCCCCEEEEe-
Confidence 001121211 2 34566652 58999999999999998876432 2223223344557764
Q ss_pred ecCCceeEEEEEEcCCCceeeeee
Q 003791 196 YAGSSQFHAYQINAMNGELLNHET 219 (795)
Q Consensus 196 ~~g~~~~~v~ald~~tG~~~w~~~ 219 (795)
.+ .+..+|+.+|+.+....
T Consensus 153 -~~----~i~~~d~~~~~~~~~~~ 171 (337)
T 1pby_B 153 -GR----DLHVMDPEAGTLVEDKP 171 (337)
T ss_dssp -SS----SEEEEETTTTEEEEEEC
T ss_pred -CC----eEEEEECCCCcEeeeee
Confidence 33 58899999999876554
No 35
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.22 E-value=0.0022 Score=70.15 Aligned_cols=192 Identities=13% Similarity=0.122 Sum_probs=117.5
Q ss_pred CCEEEEEe-CCCEEEEEECcCCccceEEEcCC----cceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCc
Q 003791 53 RKRVVVST-EENVIASLDLRHGEIFWRHVLGI----NDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGS 127 (795)
Q Consensus 53 ~~~v~vat-~~g~l~ALn~~tG~ivWR~~l~~----~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~ 127 (795)
++.+++++ .++.|..+|.++|+.......+. ...+..+....++.+++.++.++.++.||..+|+.+++......
T Consensus 133 ~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~ 212 (433)
T 3bws_A 133 NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGK 212 (433)
T ss_dssp SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSS
T ss_pred CCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCC
Confidence 55666555 56789999999999885433211 11233332223444555455568999999999999999875433
Q ss_pred cccCCceeccccccccCCCeEEEEe--CCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCC----ce
Q 003791 128 KHSKPLLLVPTNLKVDKDSLILVSS--KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGS----SQ 201 (795)
Q Consensus 128 ~~s~~~~~~~~~~~~~~~~~V~V~~--~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~----~~ 201 (795)
.. ..+.+. .+ ++.+++.. ++.+..+|..+|+..+....... +..+..+..+..+++.+..++ ..
T Consensus 213 ~~-~~~~~~-----~~-~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~---~~~~~~~~~g~~l~~~~~~~~~~~~~d 282 (433)
T 3bws_A 213 WS-KILLYD-----PI-RDLVYCSNWISEDISVIDRKTKLEIRKTDKIGL---PRGLLLSKDGKELYIAQFSASNQESGG 282 (433)
T ss_dssp SE-EEEEEE-----TT-TTEEEEEETTTTEEEEEETTTTEEEEECCCCSE---EEEEEECTTSSEEEEEEEESCTTCSCC
T ss_pred Ce-eEEEEc-----CC-CCEEEEEecCCCcEEEEECCCCcEEEEecCCCC---ceEEEEcCCCCEEEEEECCCCccccCC
Confidence 21 111111 12 34565553 79999999999999888765432 333332334556776654221 12
Q ss_pred eEEEEEEcCCCceeeeeeeeccCCcccceEEe-cCcEEEEEECCCCeEEEEEeecCe
Q 003791 202 FHAYQINAMNGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 202 ~~v~ald~~tG~~~w~~~v~~~~~~~~~~~~v-g~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
..+..+|+.+|+.+..... +.... .+.+- .++.+++.....+.+.+.++.+++
T Consensus 283 g~i~~~d~~~~~~~~~~~~--~~~~~-~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~ 336 (433)
T 3bws_A 283 GRLGIYSMDKEKLIDTIGP--PGNKR-HIVSGNTENKIYVSDMCCSKIEVYDLKEKK 336 (433)
T ss_dssp EEEEEEETTTTEEEEEEEE--EECEE-EEEECSSTTEEEEEETTTTEEEEEETTTTE
T ss_pred CeEEEEECCCCcEEeeccC--CCCcc-eEEECCCCCEEEEEecCCCEEEEEECCCCc
Confidence 3788999999988766522 11111 12222 334566666677899999998877
No 36
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.20 E-value=0.0022 Score=69.20 Aligned_cols=190 Identities=12% Similarity=0.137 Sum_probs=110.5
Q ss_pred CCC-EEEEEeCCCEEEEEEC----cCCccceEEEcC----C-----------cceeeeeeeeeCCEEEEEEccCCeEEEE
Q 003791 52 GRK-RVVVSTEENVIASLDL----RHGEIFWRHVLG----I-----------NDVVDGIDIALGKYVITLSSDGSTLRAW 111 (795)
Q Consensus 52 ~~~-~v~vat~~g~l~ALn~----~tG~ivWR~~l~----~-----------~~~i~~l~~~~g~~~V~Vs~~g~~v~A~ 111 (795)
+++ .+++++.+|.|...|. .+|+..|+.... . ...+..+.....+..++.++.++.|+.|
T Consensus 56 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~ 135 (425)
T 1r5m_A 56 LDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVENGELRLW 135 (425)
T ss_dssp SCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred CCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 355 7999999999999999 999977765321 1 1123333222334455556666799999
Q ss_pred eCCCCcEeEEEeccCccccCCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEeccCccee------------
Q 003791 112 NLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVE------------ 178 (795)
Q Consensus 112 d~~tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~~~~~------------ 178 (795)
| .+|+.+.......... ..+.+.+ + +..++.. .+|.+...|..+|+.............
T Consensus 136 ~-~~~~~~~~~~~~~~~v-~~~~~~~-----~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (425)
T 1r5m_A 136 N-KTGALLNVLNFHRAPI-VSVKWNK-----D-GTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGS 207 (425)
T ss_dssp E-TTSCEEEEECCCCSCE-EEEEECT-----T-SSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CC
T ss_pred e-CCCCeeeeccCCCccE-EEEEECC-----C-CCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcc
Confidence 9 7899998887554332 1222222 2 3345444 489999999999999988876543200
Q ss_pred -eeeEEEEecCCEEEEEEecCCceeEEEEEEcCCCceeeeeeeeccCCcccceEEe-cCcEEEEEECCCCeEEEEEeecC
Q 003791 179 -VQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNR 256 (795)
Q Consensus 179 -~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~tG~~~w~~~v~~~~~~~~~~~~v-g~~~lv~~d~~~~~L~v~~l~sg 256 (795)
...+. ...++.+++.+.+| .+..+|..+++.+..... ....+.. +.+- .+..+++.. ..+.+++.++.++
T Consensus 208 ~~~~~~-~~~~~~~~~~~~~g----~i~~~d~~~~~~~~~~~~-~~~~i~~-~~~~~~~~~l~~~~-~d~~i~i~d~~~~ 279 (425)
T 1r5m_A 208 LGVDVE-WVDDDKFVIPGPKG----AIFVYQITEKTPTGKLIG-HHGPISV-LEFNDTNKLLLSAS-DDGTLRIWHGGNG 279 (425)
T ss_dssp CBSCCE-EEETTEEEEECGGG----CEEEEETTCSSCSEEECC-CSSCEEE-EEEETTTTEEEEEE-TTSCEEEECSSSB
T ss_pred eeeEEE-EcCCCEEEEEcCCC----eEEEEEcCCCceeeeecc-CCCceEE-EEECCCCCEEEEEc-CCCEEEEEECCCC
Confidence 11121 12355555544444 688899999988766531 1112211 1222 344666655 4588999998886
Q ss_pred e
Q 003791 257 K 257 (795)
Q Consensus 257 ~ 257 (795)
+
T Consensus 280 ~ 280 (425)
T 1r5m_A 280 N 280 (425)
T ss_dssp S
T ss_pred c
Confidence 6
No 37
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.17 E-value=0.0055 Score=65.02 Aligned_cols=189 Identities=14% Similarity=0.161 Sum_probs=112.3
Q ss_pred CCEEEEEeCCCEEEEEECcCCccceEEEcCCc-ceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccC
Q 003791 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~-~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~ 131 (795)
.+.+++++.++.|.-.|.++++..-+..+... ..+..+........++.++.++.|+.||..+|+.+.......... .
T Consensus 48 ~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~-~ 126 (321)
T 3ow8_A 48 SETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDA-W 126 (321)
T ss_dssp -CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCC-C
T ss_pred CCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccE-E
Confidence 45689999999998888888765444444433 233333222333444445567899999999999998877654332 1
Q ss_pred CceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcC
Q 003791 132 PLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAM 210 (795)
Q Consensus 132 ~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~ 210 (795)
.+.+.+ + ...++.. .+|.+..+|..+|+..+......... ..+..+..+..+...+.+| .+..+|..
T Consensus 127 ~~~~sp-----d-g~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v--~~~~~spdg~~lasg~~dg----~i~iwd~~ 194 (321)
T 3ow8_A 127 TLAFSP-----D-SQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFI--LSIAYSPDGKYLASGAIDG----IINIFDIA 194 (321)
T ss_dssp CEEECT-----T-SSEEEEECTTSEEEEEETTTCSEEEEEECSSSCE--EEEEECTTSSEEEEEETTS----CEEEEETT
T ss_pred EEEECC-----C-CCEEEEEcCCCcEEEEEcCCCceeEEecCCCceE--EEEEECCCCCEEEEEcCCC----eEEEEECC
Confidence 222222 2 2334444 48999999999999998876654332 2232223344444444444 68888999
Q ss_pred CCceeeeeeeeccCCcccceEEe-cCcEEEEEECCCCeEEEEEeecCe
Q 003791 211 NGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 211 tG~~~w~~~v~~~~~~~~~~~~v-g~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
+|+.+.+.... ...+. .+.+- .+.++++.. ..+.+.+-|+.++.
T Consensus 195 ~~~~~~~~~~h-~~~v~-~l~~spd~~~l~s~s-~dg~i~iwd~~~~~ 239 (321)
T 3ow8_A 195 TGKLLHTLEGH-AMPIR-SLTFSPDSQLLVTAS-DDGYIKIYDVQHAN 239 (321)
T ss_dssp TTEEEEEECCC-SSCCC-EEEECTTSCEEEEEC-TTSCEEEEETTTCC
T ss_pred CCcEEEEEccc-CCcee-EEEEcCCCCEEEEEc-CCCeEEEEECCCcc
Confidence 99887655311 11121 12221 334555554 45778888877655
No 38
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.16 E-value=0.0026 Score=73.40 Aligned_cols=196 Identities=9% Similarity=0.008 Sum_probs=114.2
Q ss_pred ccCCCEEEEEeCCCEEEEEEC--cCCccceEEEcCCcceeeeeeeee----CCEEEEEEc-cCCeEEEEeCCCCcEeEEE
Q 003791 50 KTGRKRVVVSTEENVIASLDL--RHGEIFWRHVLGINDVVDGIDIAL----GKYVITLSS-DGSTLRAWNLPDGQMVWES 122 (795)
Q Consensus 50 ~~~~~~v~vat~~g~l~ALn~--~tG~ivWR~~l~~~~~i~~l~~~~----g~~~V~Vs~-~g~~v~A~d~~tG~llWe~ 122 (795)
+++++.+|+++.++.|..+|. ++|+++-+...... ..++...- ++..+++++ .++.|..||..+|+++.+.
T Consensus 187 spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~--p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i 264 (543)
T 1nir_A 187 SASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIE--ARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIV 264 (543)
T ss_dssp CTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSE--EEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEE
T ss_pred CCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCC--cceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceee
Confidence 345778999999999999999 89998877664332 33443333 455677665 4679999999999999988
Q ss_pred eccCcccc--------CCceeccccccccCCCeEEEE--eCCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEE
Q 003791 123 FLRGSKHS--------KPLLLVPTNLKVDKDSLILVS--SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIY 192 (795)
Q Consensus 123 ~~~~~~~s--------~~~~~~~~~~~~~~~~~V~V~--~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vy 192 (795)
...+.... ....+.. ..+ ++.+++. .+++|..+|..+++.+.....+.... +..+..+.++..+|
T Consensus 265 ~~~g~~~~~~~~~~~~~v~~i~~---s~~-~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~-~~~~~~spdg~~l~ 339 (543)
T 1nir_A 265 STRGMTVDTQTYHPEPRVAAIIA---SHE-HPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPF-LHDGGWDSSHRYFM 339 (543)
T ss_dssp ECCEECSSSCCEESCCCEEEEEE---CSS-SSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSS-CCCEEECTTSCEEE
T ss_pred cccCcccCccccccCCceEEEEE---CCC-CCEEEEEECCCCeEEEEEecCCCcceeEEeccCcC-ccCceECCCCCEEE
Confidence 76431100 0001111 111 2344443 37889999988876544222222211 22232223344566
Q ss_pred EEEecCCceeEEEEEEcCCCceeeeeeeec-cCCcccceEEe-cCcEEEEEE-CCCCeEEEEEeec
Q 003791 193 VVGYAGSSQFHAYQINAMNGELLNHETAAF-SGGFVGDVALV-SSDTLVTLD-TTRSILVTVSFKN 255 (795)
Q Consensus 193 vv~~~g~~~~~v~ald~~tG~~~w~~~v~~-~~~~~~~~~~v-g~~~lv~~d-~~~~~L~v~~l~s 255 (795)
+.+...+ .+..+|+++|+.+....+.. |....+..++- ..+.++++. ...+.+.++++.+
T Consensus 340 va~~~~~---~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 340 TAANNSN---KVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp EEEGGGT---EEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred EEecCCC---eEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCC
Confidence 6554333 67779999999887765421 22111212221 223333443 2457888888877
No 39
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.11 E-value=0.0066 Score=67.16 Aligned_cols=189 Identities=11% Similarity=0.082 Sum_probs=112.6
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccC
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~ 131 (795)
+++.+++++.+|.|...|.++|+.+++..-- ...+..+.. ..++.++.++.++.++.||..+|+.+.......... .
T Consensus 131 ~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h-~~~V~~l~~-~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v-~ 207 (464)
T 3v7d_B 131 EDNYVITGADDKMIRVYDSINKKFLLQLSGH-DGGVWALKY-AHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTV-R 207 (464)
T ss_dssp ETTEEEEEETTSCEEEEETTTTEEEEEECCC-SSCEEEEEE-CSTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCE-E
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEEEeCC-CcCEEEEEE-cCCCEEEEEeCCCCEEEEECCCCcEEEEECCCCCcc-E
Confidence 3678999999999999999999998886532 223444422 223355546667899999999999998877554332 1
Q ss_pred CceeccccccccCCCe-EEEE-eCCEEEEEECCCCcEEEEEeccCc---------------------ceeeeeEEEEecC
Q 003791 132 PLLLVPTNLKVDKDSL-ILVS-SKGCLHAVSSIDGEILWTRDFAAE---------------------SVEVQQVIQLDES 188 (795)
Q Consensus 132 ~~~~~~~~~~~~~~~~-V~V~-~~g~l~ald~~tG~~~W~~~~~~~---------------------~~~~~~vv~s~~~ 188 (795)
.+.+. ...++. ++.. .+|.+...|..++........... ......+ ...+
T Consensus 208 ~l~~~-----~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~ 280 (464)
T 3v7d_B 208 CLDIV-----EYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHG 280 (464)
T ss_dssp EEEEE-----ESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEET
T ss_pred EEEEe-----cCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCC
Confidence 11121 111333 3444 388999999888875543221100 0001111 2345
Q ss_pred CEEEEEEecCCceeEEEEEEcCCCceeeeeeeeccCCcccceEEe-cCcEEEEEECCCCeEEEEEeecCe
Q 003791 189 DQIYVVGYAGSSQFHAYQINAMNGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 189 ~~Vyvv~~~g~~~~~v~ald~~tG~~~w~~~v~~~~~~~~~~~~v-g~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
+.++..+.+| .+..+|..+|+.+...... ...+.. +.+- .++.+++.. ..+.+++-++.+++
T Consensus 281 ~~l~~~~~d~----~i~vwd~~~~~~~~~~~~~-~~~v~~-~~~~~~~~~l~sg~-~dg~i~vwd~~~~~ 343 (464)
T 3v7d_B 281 NIVVSGSYDN----TLIVWDVAQMKCLYILSGH-TDRIYS-TIYDHERKRCISAS-MDTTIRIWDLENGE 343 (464)
T ss_dssp TEEEEEETTS----CEEEEETTTTEEEEEECCC-SSCEEE-EEEETTTTEEEEEE-TTSCEEEEETTTTE
T ss_pred CEEEEEeCCC----eEEEEECCCCcEEEEecCC-CCCEEE-EEEcCCCCEEEEEe-CCCcEEEEECCCCc
Confidence 5566555455 6888999999888665311 111211 2222 345666655 45889999998887
No 40
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.10 E-value=0.0036 Score=69.19 Aligned_cols=182 Identities=8% Similarity=0.064 Sum_probs=122.6
Q ss_pred CCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccCC
Q 003791 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKP 132 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~~ 132 (795)
++.+++++.+|.|...|.++|+.++...-... .+..+ ...+..++.++.++.++.||..+|+.+++........
T Consensus 209 ~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~-~v~~~--~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v--- 282 (445)
T 2ovr_B 209 EKRVVSGSRDATLRVWDIETGQCLHVLMGHVA-AVRCV--QYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRV--- 282 (445)
T ss_dssp TTEEEEEETTSEEEEEESSSCCEEEEEECCSS-CEEEE--EECSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCE---
T ss_pred CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcc-cEEEE--EECCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCce---
Confidence 67799999999999999999999888754332 34444 2244455556667799999999999999887544322
Q ss_pred ceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcCC
Q 003791 133 LLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMN 211 (795)
Q Consensus 133 ~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~t 211 (795)
..+ ..+ +..+++. .+|.+...|..+|+..++........ ..+ ...++.++..+.+| .+..+|..+
T Consensus 283 -~~~----~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v--~~~--~~~~~~l~~~~~dg----~i~vwd~~~ 348 (445)
T 2ovr_B 283 -YSL----QFD-GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT--SGM--ELKDNILVSGNADS----TVKIWDIKT 348 (445)
T ss_dssp -EEE----EEC-SSEEEEEETTSCEEEEETTTCCEEEEECCCCSCE--EEE--EEETTEEEEEETTS----CEEEEETTT
T ss_pred -EEE----EEC-CCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccE--EEE--EEeCCEEEEEeCCC----eEEEEECCC
Confidence 111 122 3455555 49999999999999998886543322 122 23566666555555 688899999
Q ss_pred CceeeeeeeeccCCccc--ceEEecCcEEEEEECCCCeEEEEEeecCe
Q 003791 212 GELLNHETAAFSGGFVG--DVALVSSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 212 G~~~w~~~v~~~~~~~~--~~~~vg~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
|+.+....... .-.. .++-.+++.+++.. ..|.+.+-++.+++
T Consensus 349 ~~~~~~~~~~~--~~~~~v~~~~~~~~~l~s~~-~dg~v~iwd~~~~~ 393 (445)
T 2ovr_B 349 GQCLQTLQGPN--KHQSAVTCLQFNKNFVITSS-DDGTVKLWDLKTGE 393 (445)
T ss_dssp CCEEEEECSTT--SCSSCEEEEEECSSEEEEEE-TTSEEEEEETTTCC
T ss_pred CcEEEEEccCC--CCCCCEEEEEECCCEEEEEe-CCCeEEEEECCCCc
Confidence 99887664211 1111 22223556666665 46899999999987
No 41
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.09 E-value=0.0021 Score=67.04 Aligned_cols=188 Identities=10% Similarity=0.070 Sum_probs=114.1
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcCCc-ceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCcccc
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHS 130 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~-~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s 130 (795)
+++.+++++.+|.|...|.++++......+... ..+..+.....+..++.++.++.++.||..+|+.+..........
T Consensus 108 ~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i- 186 (337)
T 1gxr_A 108 DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGA- 186 (337)
T ss_dssp TSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE-
T ss_pred CCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCce-
Confidence 466799999999999999999986555554433 223333222344455556666799999999999998887544332
Q ss_pred CCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEc
Q 003791 131 KPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINA 209 (795)
Q Consensus 131 ~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~ 209 (795)
..+.+.+ + ++.+++. .+|.+..+|..+|+.......+.+. ..+..+..+..+++.+.+| .+..+|.
T Consensus 187 ~~~~~~~-----~-~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v---~~~~~s~~~~~l~~~~~~~----~i~~~~~ 253 (337)
T 1gxr_A 187 SCIDISN-----D-GTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQI---FSLGYCPTGEWLAVGMESS----NVEVLHV 253 (337)
T ss_dssp EEEEECT-----T-SSEEEEEETTSEEEEEETTTTEEEEEEECSSCE---EEEEECTTSSEEEEEETTS----CEEEEET
T ss_pred EEEEECC-----C-CCEEEEEecCCcEEEEECCCCceEeeecCCCce---EEEEECCCCCEEEEEcCCC----cEEEEEC
Confidence 1111211 2 2344444 4999999999999999888654432 2232223344455443344 6888899
Q ss_pred CCCceeeeeeeeccCCcccceEEe-cCcEEEEEECCCCeEEEEEeecCe
Q 003791 210 MNGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 210 ~tG~~~w~~~v~~~~~~~~~~~~v-g~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
.+++..... .....+. .+.+. .++.+++.. ..+.+++.++.+++
T Consensus 254 ~~~~~~~~~--~~~~~v~-~~~~~~~~~~l~~~~-~dg~i~~~~~~~~~ 298 (337)
T 1gxr_A 254 NKPDKYQLH--LHESCVL-SLKFAYCGKWFVSTG-KDNLLNAWRTPYGA 298 (337)
T ss_dssp TSSCEEEEC--CCSSCEE-EEEECTTSSEEEEEE-TTSEEEEEETTTCC
T ss_pred CCCCeEEEc--CCcccee-EEEECCCCCEEEEec-CCCcEEEEECCCCe
Confidence 988764221 1111121 12222 345666655 46889999998876
No 42
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.07 E-value=0.0038 Score=72.44 Aligned_cols=202 Identities=12% Similarity=0.020 Sum_probs=119.7
Q ss_pred CCEEEEEe-CCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCC--CCcEeEEEeccCccc
Q 003791 53 RKRVVVST-EENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLP--DGQMVWESFLRGSKH 129 (795)
Q Consensus 53 ~~~v~vat-~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~--tG~llWe~~~~~~~~ 129 (795)
++.+||+. ++|.|..+|..||+++.+...... ..++.+.-++..+|+++.++.|..||.. +++++.+........
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~--p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~ 243 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYA--VHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEAR 243 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEECSSC--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEE
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEeCCCC--ccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCc
Confidence 45666655 479999999999999999887654 2334333455677777767799999996 999998887644321
Q ss_pred cCCceeccccccccCCCeEEEE--eCCEEEEEECCCCcEEEEEeccCc---------ceeeeeEEEEecCCEEEEEEecC
Q 003791 130 SKPLLLVPTNLKVDKDSLILVS--SKGCLHAVSSIDGEILWTRDFAAE---------SVEVQQVIQLDESDQIYVVGYAG 198 (795)
Q Consensus 130 s~~~~~~~~~~~~~~~~~V~V~--~~g~l~ald~~tG~~~W~~~~~~~---------~~~~~~vv~s~~~~~Vyvv~~~g 198 (795)
.+.+-+++ ..+ ++.++|. ..+.+..+|..+++++.+...... ...+..++. ...+..+++....
T Consensus 244 --~ia~s~~~-~pD-Gk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~-s~~~~~~vv~~~~ 318 (567)
T 1qks_A 244 --SIETSKME-GWE-DKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILA-SHYRPEFIVNVKE 318 (567)
T ss_dssp --EEEECCST-TCT-TTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEE-CSSSSEEEEEETT
T ss_pred --eeEEcccc-CCC-CCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEE-cCCCCEEEEEecC
Confidence 11111000 012 5678876 489999999999999998875421 101122322 2233344444432
Q ss_pred CceeEEEEEEcCCCceeeeeeeeccCCcccceEEe-cCcEEEEEECCCCeEEEEEeecCeeeeEEEee
Q 003791 199 SSQFHAYQINAMNGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRKIAFQETHL 265 (795)
Q Consensus 199 ~~~~~v~ald~~tG~~~w~~~v~~~~~~~~~~~~v-g~~~lv~~d~~~~~L~v~~l~sg~~~~~~~~l 265 (795)
. .++..+|..+.+.+....+.....+.+ ..+- .+.++++.+...+.+.++|+.++++ ...+++
T Consensus 319 ~--g~v~~vd~~~~~~~~v~~i~~~~~~~d-~~~~pdgr~~~va~~~sn~V~ViD~~t~kl-~~~i~v 382 (567)
T 1qks_A 319 T--GKILLVDYTDLNNLKTTEISAERFLHD-GGLDGSHRYFITAANARNKLVVIDTKEGKL-VAIEDT 382 (567)
T ss_dssp T--TEEEEEETTCSSEEEEEEEECCSSEEE-EEECTTSCEEEEEEGGGTEEEEEETTTTEE-EEEEEC
T ss_pred C--CeEEEEecCCCccceeeeeeccccccC-ceECCCCCEEEEEeCCCCeEEEEECCCCcE-EEEEec
Confidence 1 167777777655333222222211111 1121 3345556665667899999999873 333443
No 43
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.04 E-value=0.019 Score=60.01 Aligned_cols=192 Identities=13% Similarity=0.116 Sum_probs=112.5
Q ss_pred CCEEEEEe-CCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEE-ccCCeEEEEeCCCCcE-eEEEeccCccc
Q 003791 53 RKRVVVST-EENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLS-SDGSTLRAWNLPDGQM-VWESFLRGSKH 129 (795)
Q Consensus 53 ~~~v~vat-~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs-~~g~~v~A~d~~tG~l-lWe~~~~~~~~ 129 (795)
.+++|++. .++.|..+|+++|++..+...+... . .+....++..++++ ..++.|+.||..+|++ ...........
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~-~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~ 86 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQITLGYDF-V-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSM 86 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCE-E-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCC
T ss_pred CCEEEEEecCCCeEEEEeCcccceeeeEEccCCc-c-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCc
Confidence 56666655 5789999999999999888765432 2 34233344445554 4467999999999998 66555443322
Q ss_pred cCCceeccccccccCCCeEEEEeC--C--EEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEE
Q 003791 130 SKPLLLVPTNLKVDKDSLILVSSK--G--CLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAY 205 (795)
Q Consensus 130 s~~~~~~~~~~~~~~~~~V~V~~~--g--~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ 205 (795)
..+.+.+ + ++.+++..+ + .+..+|..+|+.+........ +..+..+..+..+|+.+..++..+.++
T Consensus 87 -~~~~~s~-----d-g~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~---~~~~~~spdg~~l~~~~~~~~~~i~~~ 156 (331)
T 3u4y_A 87 -ADVDITP-----D-DQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYD---AVGIAISPNGNGLILIDRSSANTVRRF 156 (331)
T ss_dssp -CCEEECT-----T-SSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTT---EEEEEECTTSSCEEEEEETTTTEEEEE
T ss_pred -cceEECC-----C-CCEEEEecCCCCcccEEEEECCCCCeEEEEECCCC---ccceEECCCCCEEEEEecCCCceEEEE
Confidence 1122222 2 345665433 3 999999999998887665432 333432334446887665544225555
Q ss_pred EEEcCCCceeeeeeeeccCCcc-cceEEe-cCcEEEEEECCCCeEEEEEeecCe
Q 003791 206 QINAMNGELLNHETAAFSGGFV-GDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 206 ald~~tG~~~w~~~v~~~~~~~-~~~~~v-g~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
.++ ..|..........+.+.. ..+.+- +++.+++.+...+.+++.++.+++
T Consensus 157 ~~~-~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 209 (331)
T 3u4y_A 157 KID-ADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPE 209 (331)
T ss_dssp EEC-TTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTT
T ss_pred EEC-CCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCc
Confidence 555 244443321111111111 122222 344566677667889999999877
No 44
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.04 E-value=0.013 Score=61.00 Aligned_cols=190 Identities=13% Similarity=0.097 Sum_probs=114.6
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccC
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~ 131 (795)
+++.+++++.+|.|.-.|..+|+..-...-.. ..+..+.....+..++.++.++.++.||..+|+.+-......... .
T Consensus 34 ~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v-~ 111 (312)
T 4ery_A 34 NGEWLASSSADKLIKIWGAYDGKFEKTISGHK-LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV-F 111 (312)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCEEEEECCCS-SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCE-E
T ss_pred CCCEEEEeeCCCeEEEEeCCCcccchhhccCC-CceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCE-E
Confidence 46679999999999999999998765543221 234433222334455546667899999999999988776554332 1
Q ss_pred CceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcC
Q 003791 132 PLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAM 210 (795)
Q Consensus 132 ~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~ 210 (795)
...+.+ + ...++.. .++.+...|..+|+............ ..+.....+..++..+.+| .+..+|..
T Consensus 112 ~~~~~~-----~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~d~----~i~~wd~~ 179 (312)
T 4ery_A 112 CCNFNP-----Q-SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPV--SAVHFNRDGSLIVSSSYDG----LCRIWDTA 179 (312)
T ss_dssp EEEECS-----S-SSEEEEEETTSCEEEEETTTCCEEEEECCCSSCE--EEEEECTTSSEEEEEETTS----CEEEEETT
T ss_pred EEEEcC-----C-CCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcE--EEEEEcCCCCEEEEEeCCC----cEEEEECC
Confidence 111211 1 2344444 48999999999999888776543322 2222122344444444444 68888999
Q ss_pred CCceeeeeeeeccCCcccceEEe-cCcEEEEEECCCCeEEEEEeecCe
Q 003791 211 NGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 211 tG~~~w~~~v~~~~~~~~~~~~v-g~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
+|+.+..........+.. +.+- .++.+++.. ..+.+++.|+.+++
T Consensus 180 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~-~d~~i~iwd~~~~~ 225 (312)
T 4ery_A 180 SGQCLKTLIDDDNPPVSF-VKFSPNGKYILAAT-LDNTLKLWDYSKGK 225 (312)
T ss_dssp TCCEEEEECCSSCCCEEE-EEECTTSSEEEEEE-TTTEEEEEETTTTE
T ss_pred CCceeeEEeccCCCceEE-EEECCCCCEEEEEc-CCCeEEEEECCCCc
Confidence 998776542111111111 1111 344666655 45889999998876
No 45
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.02 E-value=0.00055 Score=71.40 Aligned_cols=151 Identities=14% Similarity=0.093 Sum_probs=106.3
Q ss_pred CCEEEEEeCC-CEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEE-EccCCeEEEEeCCCCcEeEEEeccCcccc
Q 003791 53 RKRVVVSTEE-NVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITL-SSDGSTLRAWNLPDGQMVWESFLRGSKHS 130 (795)
Q Consensus 53 ~~~v~vat~~-g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~V-s~~g~~v~A~d~~tG~llWe~~~~~~~~s 130 (795)
++++|+++.. |.|..+|++||+++-+. ++...-..++ ...++.+|+ +-.++.+..+|++|++++=+.+...+..
T Consensus 64 ~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGi--t~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~eGw- 139 (268)
T 3nok_A 64 QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGL--ASDGERLYQLTWTEGLLFTWSGMPPQRERTTRYSGEGW- 139 (268)
T ss_dssp TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEE--EECSSCEEEEESSSCEEEEEETTTTEEEEEEECSSCCC-
T ss_pred CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEE--EEeCCEEEEEEccCCEEEEEECCcCcEEEEEeCCCcee-
Confidence 6889999875 78999999999999999 7654211234 333344555 4456899999999999999998764422
Q ss_pred CCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEeccCccee---eeeEEEEecCCEEEEEEecCCceeEEEE
Q 003791 131 KPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVE---VQQVIQLDESDQIYVVGYAGSSQFHAYQ 206 (795)
Q Consensus 131 ~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~~~~~---~~~vv~s~~~~~Vyvv~~~g~~~~~v~a 206 (795)
.+. .+ ++.+++. .+++|+-+|++|++++=+......... +-.+- ..++.+|+-..... .+..
T Consensus 140 ---GLt-----~D-g~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe--~~dG~lyanvw~s~---~I~v 205 (268)
T 3nok_A 140 ---GLC-----YW-NGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELE--CANGVIYANIWHSS---DVLE 205 (268)
T ss_dssp ---CEE-----EE-TTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEE--EETTEEEEEETTCS---EEEE
T ss_pred ---EEe-----cC-CCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccE--EeCCEEEEEECCCC---eEEE
Confidence 122 23 4567776 488999999999998876665432211 11121 24789997665544 8999
Q ss_pred EEcCCCceeeeeeee
Q 003791 207 INAMNGELLNHETAA 221 (795)
Q Consensus 207 ld~~tG~~~w~~~v~ 221 (795)
+|++||+++....++
T Consensus 206 IDp~TG~V~~~Idl~ 220 (268)
T 3nok_A 206 IDPATGTVVGVIDAS 220 (268)
T ss_dssp ECTTTCBEEEEEECH
T ss_pred EeCCCCcEEEEEECC
Confidence 999999999877654
No 46
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.00 E-value=0.0097 Score=64.82 Aligned_cols=188 Identities=10% Similarity=-0.000 Sum_probs=117.0
Q ss_pred CCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccCC
Q 003791 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKP 132 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~~ 132 (795)
.+.+++++.+|.|.-.|..+|+............+..+.....+..+++++.++.++.||..+|+.+.+........
T Consensus 103 ~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v--- 179 (401)
T 4aez_A 103 NLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARV--- 179 (401)
T ss_dssp TTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCE---
T ss_pred CCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCce---
Confidence 45688999999999999999999888877544445544333344556656666799999999999998887544322
Q ss_pred ceeccccccccCCCeEEEE-eCCEEEEEECC-CCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcC
Q 003791 133 LLLVPTNLKVDKDSLILVS-SKGCLHAVSSI-DGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAM 210 (795)
Q Consensus 133 ~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~-tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~ 210 (795)
..+ ..+ .+.++.. .+|.+...|.. .+............. ..+..+..+..++..+.+| .+..+|..
T Consensus 180 -~~~----~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~s~~~d~----~v~iwd~~ 247 (401)
T 4aez_A 180 -GCL----SWN-RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEV--CGLAWRSDGLQLASGGNDN----VVQIWDAR 247 (401)
T ss_dssp -EEE----EEE-TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCE--EEEEECTTSSEEEEEETTS----CEEEEETT
T ss_pred -EEE----EEC-CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCe--eEEEEcCCCCEEEEEeCCC----eEEEccCC
Confidence 122 222 3444444 48999999998 455666655433322 2222122333444444344 68889999
Q ss_pred CCceeeeeeeeccCCcccceEEe--cCcEEEEEE-CCCCeEEEEEeecCe
Q 003791 211 NGELLNHETAAFSGGFVGDVALV--SSDTLVTLD-TTRSILVTVSFKNRK 257 (795)
Q Consensus 211 tG~~~w~~~v~~~~~~~~~~~~v--g~~~lv~~d-~~~~~L~v~~l~sg~ 257 (795)
+++.+...... ...+.. +.+. +..++++.. ...+.+++.++.+++
T Consensus 248 ~~~~~~~~~~~-~~~v~~-~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~ 295 (401)
T 4aez_A 248 SSIPKFTKTNH-NAAVKA-VAWCPWQSNLLATGGGTMDKQIHFWNAATGA 295 (401)
T ss_dssp CSSEEEEECCC-SSCCCE-EEECTTSTTEEEEECCTTTCEEEEEETTTCC
T ss_pred CCCccEEecCC-cceEEE-EEECCCCCCEEEEecCCCCCEEEEEECCCCC
Confidence 99888765311 112211 2221 334554442 246889999998877
No 47
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=97.99 E-value=0.0012 Score=69.56 Aligned_cols=138 Identities=9% Similarity=0.004 Sum_probs=80.0
Q ss_pred eeeccccceeEEEeccC--ceeeeeeeeeccCCCEEEEEe-CCCEEEEEECcCCccceEEEcCCc-----ceeeeeeeee
Q 003791 23 LYEDQVGLMDWHQQYIG--KVKHAVFHTQKTGRKRVVVST-EENVIASLDLRHGEIFWRHVLGIN-----DVVDGIDIAL 94 (795)
Q Consensus 23 l~edq~G~~dW~~~~vG--~~~~~~f~~~~~~~~~v~vat-~~g~l~ALn~~tG~ivWR~~l~~~-----~~i~~l~~~~ 94 (795)
++.-+.|+..++...-+ .+....|. ++++.+|+++ .++.|..+|+++|+++++..+... ..+.++....
T Consensus 25 ~~d~~~~~~~~~~~~~~~~~~~~~~~s---~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~sp 101 (349)
T 1jmx_B 25 VVDVASDTVYKSCVMPDKFGPGTAMMA---PDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISP 101 (349)
T ss_dssp EEETTTTEEEEEEECSSCCSSCEEEEC---TTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECT
T ss_pred EEECCCCcEEEEEecCCCCCCceeEEC---CCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECC
Confidence 44444566555554322 23333332 3355687776 578999999999999999887542 1122332222
Q ss_pred CCEEEEEEcc------------CCeEEEEeCCCCcEe---EEEeccCccccCCceeccccccccCCCeEEEEeCCEEEEE
Q 003791 95 GKYVITLSSD------------GSTLRAWNLPDGQMV---WESFLRGSKHSKPLLLVPTNLKVDKDSLILVSSKGCLHAV 159 (795)
Q Consensus 95 g~~~V~Vs~~------------g~~v~A~d~~tG~ll---We~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~~~g~l~al 159 (795)
++..+++++. ++.++.||..+|+.. ......... ..+.+ ..++.+++. ++.++.+
T Consensus 102 dg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~--~~~~~-------s~dg~l~~~-~~~i~~~ 171 (349)
T 1jmx_B 102 DGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQV--YLMRA-------ADDGSLYVA-GPDIYKM 171 (349)
T ss_dssp TSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSC--CCEEE-------CTTSCEEEE-SSSEEEE
T ss_pred CCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcc--cceeE-------CCCCcEEEc-cCcEEEE
Confidence 3445555542 369999999996543 332222211 11111 224446664 4559999
Q ss_pred ECCCCcEEEEEecc
Q 003791 160 SSIDGEILWTRDFA 173 (795)
Q Consensus 160 d~~tG~~~W~~~~~ 173 (795)
|..+|++.+.....
T Consensus 172 d~~~~~~~~~~~~~ 185 (349)
T 1jmx_B 172 DVKTGKYTVALPLR 185 (349)
T ss_dssp CTTTCCEEEEECST
T ss_pred eCCCCceecccccc
Confidence 99999998877644
No 48
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.97 E-value=0.024 Score=65.67 Aligned_cols=221 Identities=10% Similarity=0.017 Sum_probs=119.1
Q ss_pred ceeeccccceeEEEeccCceeeeeeeeeccCCCEEEEEeCCCEEEEEECc--CCccceEEEcCCcceeeeeeee----eC
Q 003791 22 SLYEDQVGLMDWHQQYIGKVKHAVFHTQKTGRKRVVVSTEENVIASLDLR--HGEIFWRHVLGINDVVDGIDIA----LG 95 (795)
Q Consensus 22 Al~edq~G~~dW~~~~vG~~~~~~f~~~~~~~~~v~vat~~g~l~ALn~~--tG~ivWR~~l~~~~~i~~l~~~----~g 95 (795)
.++.-+.+++..+... |.. ++....+++++.+|+++++|.|..+|.. +++++.+...... ..++... -+
T Consensus 180 ~viD~~t~~v~~~i~~-g~~--p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~--P~~ia~s~~~~pD 254 (567)
T 1qks_A 180 ALIDGSTYEIKTVLDT-GYA--VHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE--ARSIETSKMEGWE 254 (567)
T ss_dssp EEEETTTCCEEEEEEC-SSC--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSE--EEEEEECCSTTCT
T ss_pred EEEECCCCeEEEEEeC-CCC--ccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCC--CceeEEccccCCC
Confidence 3444455565555543 321 1222234567789999999999999996 9999988776543 2334233 13
Q ss_pred CEEEEEEc-cCCeEEEEeCCCCcEeEEEeccCccccC-----C---ceeccccccccCCCeEEEE--eCCEEEEEECCCC
Q 003791 96 KYVITLSS-DGSTLRAWNLPDGQMVWESFLRGSKHSK-----P---LLLVPTNLKVDKDSLILVS--SKGCLHAVSSIDG 164 (795)
Q Consensus 96 ~~~V~Vs~-~g~~v~A~d~~tG~llWe~~~~~~~~s~-----~---~~~~~~~~~~~~~~~V~V~--~~g~l~ald~~tG 164 (795)
+..+++++ .++.+..+|..|++++....+.+..... . ..++. ..+ ....++. ..|+|..+|..+.
T Consensus 255 Gk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~---s~~-~~~~vv~~~~~g~v~~vd~~~~ 330 (567)
T 1qks_A 255 DKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILA---SHY-RPEFIVNVKETGKILLVDYTDL 330 (567)
T ss_dssp TTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEE---CSS-SSEEEEEETTTTEEEEEETTCS
T ss_pred CCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEE---cCC-CCEEEEEecCCCeEEEEecCCC
Confidence 44666655 4689999999999999998865421100 0 01111 011 1222222 2677777777665
Q ss_pred cEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcCCCceeeeeee-e-ccCCcccceEEe-cCcEEEEE
Q 003791 165 EILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHETA-A-FSGGFVGDVALV-SSDTLVTL 241 (795)
Q Consensus 165 ~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~tG~~~w~~~v-~-~~~~~~~~~~~v-g~~~lv~~ 241 (795)
+..=....+.+.. +.......++..+|+.+...+ ++..+|.++|+++....+ . .|..-.+.-++- ..+.+.++
T Consensus 331 ~~~~v~~i~~~~~-~~d~~~~pdgr~~~va~~~sn---~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t 406 (567)
T 1qks_A 331 NNLKTTEISAERF-LHDGGLDGSHRYFITAANARN---KLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWAT 406 (567)
T ss_dssp SEEEEEEEECCSS-EEEEEECTTSCEEEEEEGGGT---EEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEE
T ss_pred ccceeeeeecccc-ccCceECCCCCEEEEEeCCCC---eEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEe
Confidence 4221111111111 111211223445565444333 788899999999887765 2 232212212221 12333222
Q ss_pred -ECCCCeEEEEEeec
Q 003791 242 -DTTRSILVTVSFKN 255 (795)
Q Consensus 242 -d~~~~~L~v~~l~s 255 (795)
....+.+.+++..+
T Consensus 407 ~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 407 SHMGDDSVALIGTDP 421 (567)
T ss_dssp EBSSSSEEEEEECCT
T ss_pred CCCCCCeEEEecCCC
Confidence 23346788888776
No 49
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.94 E-value=0.0071 Score=65.61 Aligned_cols=189 Identities=9% Similarity=-0.022 Sum_probs=111.7
Q ss_pred CCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccCC
Q 003791 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKP 132 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~~ 132 (795)
++.+++++.+|.+...|..+++........ ...........+..++.++.++.++.||..+|+............ ..
T Consensus 68 g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v-~~ 144 (420)
T 3vl1_A 68 GSHLYKARLDGHDFLFNTIIRDGSKMLKRA--DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEI-TK 144 (420)
T ss_dssp ETTEEEEEETTEEEEEECCSEETTTTSCSC--CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCE-EE
T ss_pred CCeEEEEEcCCcEEEEEecccceeeEEecC--CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCcc-EE
Confidence 556999999999999999988775443222 111111112334455556666799999999999876644333222 11
Q ss_pred ceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcCC
Q 003791 133 LLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMN 211 (795)
Q Consensus 133 ~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~t 211 (795)
+.+.+ + ++.++.. .++.+...|..+|+...++....... ..+..+..+..++..+.+| .+..+|..+
T Consensus 145 ~~~~~-----~-~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v--~~~~~~~~~~~l~s~~~d~----~v~iwd~~~ 212 (420)
T 3vl1_A 145 LKFFP-----S-GEALISSSQDMQLKIWSVKDGSNPRTLIGHRATV--TDIAIIDRGRNVLSASLDG----TIRLWECGT 212 (420)
T ss_dssp EEECT-----T-SSEEEEEETTSEEEEEETTTCCCCEEEECCSSCE--EEEEEETTTTEEEEEETTS----CEEEEETTT
T ss_pred EEECC-----C-CCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcE--EEEEEcCCCCEEEEEcCCC----cEEEeECCC
Confidence 22222 2 2344444 38999999999999887775433322 2232233455566555555 688889999
Q ss_pred Cceeeeeeeecc--CCcccceE--------------------E-ecCcEEEEEECCCCeEEEEEeecCe
Q 003791 212 GELLNHETAAFS--GGFVGDVA--------------------L-VSSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 212 G~~~w~~~v~~~--~~~~~~~~--------------------~-vg~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
|+.+........ ..+..-.. + ..+..+++.. ..|.+++.|+.+++
T Consensus 213 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~ 280 (420)
T 3vl1_A 213 GTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGH-VSGVITVHNVFSKE 280 (420)
T ss_dssp TEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEE-TTSCEEEEETTTCC
T ss_pred CceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEc-CCCeEEEEECCCCc
Confidence 998877643211 11100000 0 1233555555 46889999998876
No 50
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.94 E-value=0.01 Score=62.15 Aligned_cols=217 Identities=8% Similarity=0.056 Sum_probs=115.8
Q ss_pred ceeeccccceeEEEeccCceeeeeeeeeccCCCEEEEEeC-CCEEEEEECcCCcc-ceEEEcCCcceeeeeeeeeCCEEE
Q 003791 22 SLYEDQVGLMDWHQQYIGKVKHAVFHTQKTGRKRVVVSTE-ENVIASLDLRHGEI-FWRHVLGINDVVDGIDIALGKYVI 99 (795)
Q Consensus 22 Al~edq~G~~dW~~~~vG~~~~~~f~~~~~~~~~v~vat~-~g~l~ALn~~tG~i-vWR~~l~~~~~i~~l~~~~g~~~V 99 (795)
.++.-+.|+.......-+.+....| .++++.+|+++. ++.|..+|+++|++ ......... ...++....++..+
T Consensus 23 ~~~d~~~~~~~~~~~~~~~~~~~~~---s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l 98 (331)
T 3u4y_A 23 SFFSTDTLEILNQITLGYDFVDTAI---TSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQS-SMADVDITPDDQFA 98 (331)
T ss_dssp EEEETTTCCEEEEEECCCCEEEEEE---CSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSS-CCCCEEECTTSSEE
T ss_pred EEEeCcccceeeeEEccCCcceEEE---cCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCC-CccceEECCCCCEE
Confidence 3444455665444442111112222 234556888887 78999999999998 544443332 12213223344455
Q ss_pred EEEccC-C--eEEEEeCCCCcEeEEEeccCccccCCceeccccccccCCCeEEEE-e-CCE-EEEEECCC-CcEEEE--E
Q 003791 100 TLSSDG-S--TLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-S-KGC-LHAVSSID-GEILWT--R 170 (795)
Q Consensus 100 ~Vs~~g-~--~v~A~d~~tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~-~-~g~-l~ald~~t-G~~~W~--~ 170 (795)
+++..+ + .|+.||..+|+.+.......... .+.+. .+ ++.+++. . ++. +..++... |.+... .
T Consensus 99 ~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~--~~~~s-----pd-g~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~ 170 (331)
T 3u4y_A 99 VTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAV--GIAIS-----PN-GNGLILIDRSSANTVRRFKIDADGVLFDTGQE 170 (331)
T ss_dssp EECCCSSSSCEEEEEETTTTEEEEEEECCTTEE--EEEEC-----TT-SSCEEEEEETTTTEEEEEEECTTCCEEEEEEE
T ss_pred EEecCCCCcccEEEEECCCCCeEEEEECCCCcc--ceEEC-----CC-CCEEEEEecCCCceEEEEEECCCCcEeecCCc
Confidence 554433 3 89999999999988776543221 11121 12 2346665 2 355 66555443 332221 1
Q ss_pred eccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcCCCce---eeeeeeeccCCcccceEEe-cCcEEEEEECCCC
Q 003791 171 DFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGEL---LNHETAAFSGGFVGDVALV-SSDTLVTLDTTRS 246 (795)
Q Consensus 171 ~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~tG~~---~w~~~v~~~~~~~~~~~~v-g~~~lv~~d~~~~ 246 (795)
..+.. ..+..+..+..+..+|+.+..++ .+..+|+.+|+. +.+.. ..... ..+.+- .+..+++.+...+
T Consensus 171 ~~~~~-~~~~~~~~spdg~~l~v~~~~~~---~v~v~d~~~~~~~~~~~~~~--~~~~~-~~~~~spdg~~l~v~~~~~~ 243 (331)
T 3u4y_A 171 FISGG-TRPFNITFTPDGNFAFVANLIGN---SIGILETQNPENITLLNAVG--TNNLP-GTIVVSRDGSTVYVLTESTV 243 (331)
T ss_dssp EECSS-SSEEEEEECTTSSEEEEEETTTT---EEEEEECSSTTSCEEEEEEE--CSSCC-CCEEECTTSSEEEEECSSEE
T ss_pred cccCC-CCccceEECCCCCEEEEEeCCCC---eEEEEECCCCcccceeeecc--CCCCC-ceEEECCCCCEEEEEEcCCC
Confidence 11111 11334433334445887665444 788899999998 44432 22111 122332 3445555655556
Q ss_pred eEEEEEeecCe
Q 003791 247 ILVTVSFKNRK 257 (795)
Q Consensus 247 ~L~v~~l~sg~ 257 (795)
.+.+.++.+++
T Consensus 244 ~i~~~d~~~~~ 254 (331)
T 3u4y_A 244 DVFNFNQLSGT 254 (331)
T ss_dssp EEEEEETTTTE
T ss_pred EEEEEECCCCc
Confidence 78899998887
No 51
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.94 E-value=0.0069 Score=64.28 Aligned_cols=189 Identities=12% Similarity=0.115 Sum_probs=114.9
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccC
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~ 131 (795)
....++.++.++.|.-.|.++|+.+........ .+..+.....+..++.++.++.++.||..+|+..+......... .
T Consensus 91 ~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~-~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v-~ 168 (321)
T 3ow8_A 91 TLPIAASSSLDAHIRLWDLENGKQIKSIDAGPV-DAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFI-L 168 (321)
T ss_dssp SSSEEEEEETTSEEEEEETTTTEEEEEEECCTT-CCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCE-E
T ss_pred CCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCc-cEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceE-E
Confidence 356688899999999999999998887665433 22223222334455556667899999999999999887654332 1
Q ss_pred CceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcC
Q 003791 132 PLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAM 210 (795)
Q Consensus 132 ~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~ 210 (795)
.+.+.+ + ++.++.. .+|.+...|..+|+.+-+.+...... ..+..+ .++..++.+...+ .+...|..
T Consensus 169 ~~~~sp-----d-g~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v--~~l~~s-pd~~~l~s~s~dg---~i~iwd~~ 236 (321)
T 3ow8_A 169 SIAYSP-----D-GKYLASGAIDGIINIFDIATGKLLHTLEGHAMPI--RSLTFS-PDSQLLVTASDDG---YIKIYDVQ 236 (321)
T ss_dssp EEEECT-----T-SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCC--CEEEEC-TTSCEEEEECTTS---CEEEEETT
T ss_pred EEEECC-----C-CCEEEEEcCCCeEEEEECCCCcEEEEEcccCCce--eEEEEc-CCCCEEEEEcCCC---eEEEEECC
Confidence 111211 2 2344444 48999999999999887775433222 222212 2333343333322 57888999
Q ss_pred CCceeeeeeeeccCCcccceEEe-cCcEEEEEECCCCeEEEEEeecCe
Q 003791 211 NGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 211 tG~~~w~~~v~~~~~~~~~~~~v-g~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
+++.+....-. ...+. .+.+- .+..++... ..+.+.+-|+.+++
T Consensus 237 ~~~~~~~~~~h-~~~v~-~~~~sp~~~~l~s~s-~D~~v~iwd~~~~~ 281 (321)
T 3ow8_A 237 HANLAGTLSGH-ASWVL-NVAFCPDDTHFVSSS-SDKSVKVWDVGTRT 281 (321)
T ss_dssp TCCEEEEECCC-SSCEE-EEEECTTSSEEEEEE-TTSCEEEEETTTTE
T ss_pred CcceeEEEcCC-CCceE-EEEECCCCCEEEEEe-CCCcEEEEeCCCCE
Confidence 98876544211 11111 11221 344665555 45789999998876
No 52
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.92 E-value=0.027 Score=59.07 Aligned_cols=190 Identities=9% Similarity=0.019 Sum_probs=108.1
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccC
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~ 131 (795)
+++.+++++.+|.|...|..+|+.+.+..-... .+..+.....+..++.++.++.|+.||..+|+.+..........
T Consensus 43 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~-- 119 (369)
T 3zwl_B 43 EGDLLFSCSKDSSASVWYSLNGERLGTLDGHTG-TIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVK-- 119 (369)
T ss_dssp TSCEEEEEESSSCEEEEETTTCCEEEEECCCSS-CEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSCEE--
T ss_pred CCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCC-cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCeE--
Confidence 466799999999999999999999887653222 34444222234445545566799999999999999988544322
Q ss_pred CceeccccccccCCCeEEEE-eC-----CEEEEEECCCCcEEEEEeccC--cce---------eeeeEEEEecCCEEEEE
Q 003791 132 PLLLVPTNLKVDKDSLILVS-SK-----GCLHAVSSIDGEILWTRDFAA--ESV---------EVQQVIQLDESDQIYVV 194 (795)
Q Consensus 132 ~~~~~~~~~~~~~~~~V~V~-~~-----g~l~ald~~tG~~~W~~~~~~--~~~---------~~~~vv~s~~~~~Vyvv 194 (795)
.+.+.+ + +..+++. .+ |.+..+|..++.......... +.. ....+..+..+..+++.
T Consensus 120 ~~~~~~-----~-~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 193 (369)
T 3zwl_B 120 RVEFSP-----C-GNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAG 193 (369)
T ss_dssp EEEECT-----T-SSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEE
T ss_pred EEEEcc-----C-CCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEE
Confidence 222222 2 2344443 35 788888877665332222111 100 01112112234445544
Q ss_pred EecCCceeEEEEEEcCC-CceeeeeeeeccCCcccceEEe-cCcEEEEEECCCCeEEEEEeecCe
Q 003791 195 GYAGSSQFHAYQINAMN-GELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 195 ~~~g~~~~~v~ald~~t-G~~~w~~~v~~~~~~~~~~~~v-g~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
+.+| .+..+|..+ ++.+...... ...+.. +.+- .+..+++.. ..+.+.+.|+.+++
T Consensus 194 ~~dg----~i~i~d~~~~~~~~~~~~~~-~~~v~~-~~~~~~~~~l~~~~-~d~~i~v~d~~~~~ 251 (369)
T 3zwl_B 194 HKDG----KISKYDVSNNYEYVDSIDLH-EKSISD-MQFSPDLTYFITSS-RDTNSFLVDVSTLQ 251 (369)
T ss_dssp ETTS----EEEEEETTTTTEEEEEEECC-SSCEEE-EEECTTSSEEEEEE-TTSEEEEEETTTCC
T ss_pred cCCC----EEEEEECCCCcEeEEEEecC-CCceeE-EEECCCCCEEEEec-CCceEEEEECCCCc
Confidence 4344 788899988 5655544311 111211 2221 344555554 45788888888876
No 53
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.89 E-value=0.0056 Score=63.07 Aligned_cols=153 Identities=16% Similarity=0.138 Sum_probs=107.3
Q ss_pred CCEEEEEeCC---CEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccc
Q 003791 53 RKRVVVSTEE---NVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKH 129 (795)
Q Consensus 53 ~~~v~vat~~---g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~ 129 (795)
++++|+++.. +.|..+|++||+++=+..++...-..++ ...++.+..++-..+.+..+|++|++++=+.+...+..
T Consensus 30 ~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi-~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~Gw 108 (243)
T 3mbr_X 30 RGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGI-VAWRDRLIQLTWRNHEGFVYDLATLTPRARFRYPGEGW 108 (243)
T ss_dssp TTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEE-EEETTEEEEEESSSSEEEEEETTTTEEEEEEECSSCCC
T ss_pred CCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEE-EEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCce
Confidence 6899999986 5999999999999988888765211233 12454444445456799999999999999998765432
Q ss_pred cCCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEeccCccee---eeeEEEEecCCEEEEEEecCCceeEEE
Q 003791 130 SKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVE---VQQVIQLDESDQIYVVGYAGSSQFHAY 205 (795)
Q Consensus 130 s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~~~~~---~~~vv~s~~~~~Vyvv~~~g~~~~~v~ 205 (795)
.+. .+ ++.+++. .+++|+-+|++|.+++=+.+....... +-.+ ...++.+|+-..... .+.
T Consensus 109 ----glt-----~d-g~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeL--e~~~G~lyanvw~s~---~I~ 173 (243)
T 3mbr_X 109 ----ALT-----SD-DSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNEL--EWVNGELLANVWLTS---RIA 173 (243)
T ss_dssp ----EEE-----EC-SSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEE--EEETTEEEEEETTTT---EEE
T ss_pred ----EEe-----eC-CCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceee--EEeCCEEEEEECCCC---eEE
Confidence 222 22 4567776 478999999999998866655432111 1112 135889997654444 799
Q ss_pred EEEcCCCceeeeeeee
Q 003791 206 QINAMNGELLNHETAA 221 (795)
Q Consensus 206 ald~~tG~~~w~~~v~ 221 (795)
.+|++||+++....++
T Consensus 174 vIDp~tG~V~~~idl~ 189 (243)
T 3mbr_X 174 RIDPASGKVVAWIDLQ 189 (243)
T ss_dssp EECTTTCBEEEEEECG
T ss_pred EEECCCCCEEEEEECC
Confidence 9999999999877654
No 54
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.88 E-value=0.0029 Score=65.87 Aligned_cols=153 Identities=16% Similarity=0.159 Sum_probs=106.0
Q ss_pred CCEEEEEeCC---CEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccc
Q 003791 53 RKRVVVSTEE---NVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKH 129 (795)
Q Consensus 53 ~~~v~vat~~---g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~ 129 (795)
++.+|+++.. +.|..+|++||+++=+..++...-..++. ..++.+..++-.++.+..+|++|++++=+.+...+..
T Consensus 52 ~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit-~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG~ 130 (262)
T 3nol_A 52 NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGIS-DWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEGW 130 (262)
T ss_dssp TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEE-EETTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCC
T ss_pred CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEE-EeCCEEEEEEeeCCEEEEEECccCcEEEEEECCCCce
Confidence 6799999864 38999999999999999887542112341 2454444434456799999999999999998765332
Q ss_pred cCCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEeccCccee---eeeEEEEecCCEEEEEEecCCceeEEE
Q 003791 130 SKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVE---VQQVIQLDESDQIYVVGYAGSSQFHAY 205 (795)
Q Consensus 130 s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~~~~~---~~~vv~s~~~~~Vyvv~~~g~~~~~v~ 205 (795)
.+. .+ ++.+++. .+++|+-+|++|++++=+......... +-.+- ..++.+|+...... .++
T Consensus 131 ----glt-----~d-g~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe--~~~G~lyan~w~~~---~I~ 195 (262)
T 3nol_A 131 ----GLT-----HN-DQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELE--WVDGEIFANVWQTN---KIV 195 (262)
T ss_dssp ----CEE-----EC-SSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEE--EETTEEEEEETTSS---EEE
T ss_pred ----EEe-----cC-CCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeE--EECCEEEEEEccCC---eEE
Confidence 122 22 3556665 377899999999998877665432111 11121 24789998665544 899
Q ss_pred EEEcCCCceeeeeeee
Q 003791 206 QINAMNGELLNHETAA 221 (795)
Q Consensus 206 ald~~tG~~~w~~~v~ 221 (795)
.+|++||+++....++
T Consensus 196 vIDp~tG~V~~~Id~~ 211 (262)
T 3nol_A 196 RIDPETGKVTGIIDLN 211 (262)
T ss_dssp EECTTTCBEEEEEECT
T ss_pred EEECCCCcEEEEEECC
Confidence 9999999999777653
No 55
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.87 E-value=0.014 Score=61.12 Aligned_cols=199 Identities=11% Similarity=-0.018 Sum_probs=113.8
Q ss_pred eeeeeeeeeccCCCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeE
Q 003791 41 VKHAVFHTQKTGRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVW 120 (795)
Q Consensus 41 ~~~~~f~~~~~~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llW 120 (795)
+....|+ ++++.+++++.+|.|.-.|.++|+.+........ .+..+.....+..++.++.++.++.||..+|+.+.
T Consensus 16 V~~~~fs---p~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~ 91 (304)
T 2ynn_A 16 VKGIDFH---PTEPWVLTTLYSGRVELWNYETQVEVRSIQVTET-PVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVV 91 (304)
T ss_dssp EEEEEEC---SSSSEEEEEETTSEEEEEETTTTEEEEEEECCSS-CEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEE
T ss_pred eEEEEEC---CCCCEEEEEcCCCcEEEEECCCCceeEEeeccCC-cEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEE
Confidence 3344555 3467799999999999999999998877655433 23333223344455556667899999999999998
Q ss_pred EEeccCccccCCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEE-EeccCcceeeeeEEEEecCCE-EEEEEec
Q 003791 121 ESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWT-RDFAAESVEVQQVIQLDESDQ-IYVVGYA 197 (795)
Q Consensus 121 e~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~-~~~~~~~~~~~~vv~s~~~~~-Vyvv~~~ 197 (795)
+........ ..+.+.+ + ...++.. .++.+...|..+|...-. +...... ...+.....++. +...+.+
T Consensus 92 ~~~~h~~~v-~~~~~~~-----~-~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~--v~~v~~~p~~~~~l~sgs~D 162 (304)
T 2ynn_A 92 DFEAHPDYI-RSIAVHP-----T-KPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHF--VMCVAFNPKDPSTFASGCLD 162 (304)
T ss_dssp EEECCSSCE-EEEEECS-----S-SSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSC--EEEEEECTTCTTEEEEEETT
T ss_pred EEeCCCCcE-EEEEEcC-----C-CCEEEEECCCCeEEEEECCCCcchhhhhcccCCc--EEEEEECCCCCCEEEEEeCC
Confidence 887665433 1222222 1 2334334 388999999888854332 2211111 112221222333 4443444
Q ss_pred CCceeEEEEEEcCCCceeeeeeeeccCCcccceEEe--cCcEEEEEECCCCeEEEEEeecCe
Q 003791 198 GSSQFHAYQINAMNGELLNHETAAFSGGFVGDVALV--SSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 198 g~~~~~v~ald~~tG~~~w~~~v~~~~~~~~~~~~v--g~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
| .+...|..++.............+..-.... .+.+++... ..+.+.+-|+.+++
T Consensus 163 ~----~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s-~D~~i~iWd~~~~~ 219 (304)
T 2ynn_A 163 R----TVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITAS-DDLTIKIWDYQTKS 219 (304)
T ss_dssp S----EEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEE-TTSEEEEEETTTTE
T ss_pred C----eEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEc-CCCeEEEEeCCCCc
Confidence 4 6888898887765544221111111101111 223555554 45889999988876
No 56
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.85 E-value=0.0068 Score=66.86 Aligned_cols=184 Identities=13% Similarity=0.101 Sum_probs=118.2
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccC
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~ 131 (795)
+++.+++++.+|.|...|..+|+..+...-.. ..+..+ ...+..++.++.++.|+.||..+|+.+..........
T Consensus 142 d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~-~~v~~l--~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v-- 216 (435)
T 1p22_A 142 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHT-GSVLCL--QYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAV-- 216 (435)
T ss_dssp CSSEEEEEESSSCEEEEESSSCCEEEEECCCS-SCEEEE--ECCSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCE--
T ss_pred CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCC-CcEEEE--EECCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcE--
Confidence 46779999999999999999999988765322 234444 2345566656667899999999999998877554322
Q ss_pred CceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEec-cCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEc
Q 003791 132 PLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDF-AAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINA 209 (795)
Q Consensus 132 ~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~-~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~ 209 (795)
..+ ... ++.++.. .+|.+...|..+++....... .........+ ...++.++..+.+| .+..+|.
T Consensus 217 --~~l----~~~-~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~s~~~dg----~i~vwd~ 283 (435)
T 1p22_A 217 --LHL----RFN-NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVV--DFDDKYIVSASGDR----TIKVWNT 283 (435)
T ss_dssp --EEE----ECC-TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEE--EEETTEEEEEETTS----EEEEEET
T ss_pred --EEE----EEc-CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEE--EeCCCEEEEEeCCC----eEEEEEC
Confidence 111 112 3445554 489999999998876532211 1111111122 23566666655555 7889999
Q ss_pred CCCceeeeeeeeccCCcccceEEecCcEEEEEECCCCeEEEEEeecCe
Q 003791 210 MNGELLNHETAAFSGGFVGDVALVSSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 210 ~tG~~~w~~~v~~~~~~~~~~~~vg~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
.+|+.+.+.... ...+ .++-.+++.+++.. ..+.+.+.|+.+++
T Consensus 284 ~~~~~~~~~~~~-~~~v--~~~~~~~~~l~~g~-~dg~i~iwd~~~~~ 327 (435)
T 1p22_A 284 STCEFVRTLNGH-KRGI--ACLQYRDRLVVSGS-SDNTIRLWDIECGA 327 (435)
T ss_dssp TTCCEEEEEECC-SSCE--EEEEEETTEEEEEE-TTSCEEEEETTTCC
T ss_pred CcCcEEEEEcCC-CCcE--EEEEeCCCEEEEEe-CCCeEEEEECCCCC
Confidence 999988766411 1111 22223556666665 45889999998876
No 57
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.85 E-value=0.016 Score=68.99 Aligned_cols=192 Identities=10% Similarity=-0.012 Sum_probs=114.8
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccC
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~ 131 (795)
+++.+++++.+|.|.-.|..+|+.+.+...... .+..+.....+..+++++.++.++.||..+|+.+.+........ .
T Consensus 24 ~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v-~ 101 (814)
T 3mkq_A 24 TEPWVLTTLYSGRVEIWNYETQVEVRSIQVTET-PVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYI-R 101 (814)
T ss_dssp SSSEEEEEETTSEEEEEETTTTEEEEEEECCSS-CEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCE-E
T ss_pred CCCEEEEEeCCCEEEEEECCCCceEEEEecCCC-cEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCE-E
Confidence 467799999999999999999998888764332 34444223344455556667899999999999999887654432 1
Q ss_pred CceeccccccccCCCeEEEE-eCCEEEEEECCCCc-EEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEc
Q 003791 132 PLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGE-ILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINA 209 (795)
Q Consensus 132 ~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~-~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~ 209 (795)
.+.+.+ + +..++.. .+|.+...|..+|. ..-........ ...+..+..++..++.+...+ .+..+|.
T Consensus 102 ~~~~s~-----~-~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~--v~~~~~~p~~~~~l~~~~~dg---~v~vwd~ 170 (814)
T 3mkq_A 102 SIAVHP-----T-KPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHF--VMCVAFNPKDPSTFASGCLDR---TVKVWSL 170 (814)
T ss_dssp EEEECS-----S-SSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSC--EEEEEEETTEEEEEEEEETTS---EEEEEET
T ss_pred EEEEeC-----C-CCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCc--EEEEEEEcCCCCEEEEEeCCC---eEEEEEC
Confidence 122222 1 2344444 38899999988873 33333222221 122221221333444444333 7888899
Q ss_pred CCCceeeeeeeeccCCcccceEEe--cCcEEEEEECCCCeEEEEEeecCe
Q 003791 210 MNGELLNHETAAFSGGFVGDVALV--SSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 210 ~tG~~~w~~~v~~~~~~~~~~~~v--g~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
.+|+............+....... +++.+++.. ..+.+.+.++.+++
T Consensus 171 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-~dg~i~~~d~~~~~ 219 (814)
T 3mkq_A 171 GQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITAS-DDLTIKIWDYQTKS 219 (814)
T ss_dssp TCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEEC-TTSEEEEEETTTTE
T ss_pred CCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEe-CCCEEEEEECCCCc
Confidence 888887666433223332211111 334555554 56889999988876
No 58
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=97.84 E-value=0.00068 Score=73.25 Aligned_cols=192 Identities=8% Similarity=0.094 Sum_probs=112.9
Q ss_pred CCEEEEEeCCCEEEEEECcCCccceEEEcCC---cceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccc
Q 003791 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGI---NDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKH 129 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~---~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~ 129 (795)
++++++++.+|.|.-.|.++|+......... .+.+..+....++..++.++.++.|+.||..+|+.+-.........
T Consensus 93 d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V 172 (344)
T 4gqb_B 93 ERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQV 172 (344)
T ss_dssp TTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred CCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCce
Confidence 5789999999999999999999887655422 2334444322333444445567799999999999998877554332
Q ss_pred cCCceeccccccccCCCeEEE-Ee-CCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEE
Q 003791 130 SKPLLLVPTNLKVDKDSLILV-SS-KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQI 207 (795)
Q Consensus 130 s~~~~~~~~~~~~~~~~~V~V-~~-~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~al 207 (795)
....+. .+ +..+++ .+ |+.+...|..+|+..-+............+.....++.+++.+...+ .+..+
T Consensus 173 -~~~~~~-----~~-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg---~v~~w 242 (344)
T 4gqb_B 173 -TCVAAS-----PH-KDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENG---TVSLV 242 (344)
T ss_dssp -EEEEEC-----SS-CTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTS---EEEEE
T ss_pred -EEEEec-----CC-CCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCC---cEEEE
Confidence 111111 12 233544 33 89999999999988766544332221222322233555665554433 78888
Q ss_pred EcCCCceeeeeeeeccCCcccceEEe--cCcEEEEEECCCCeEEEEEeecCe
Q 003791 208 NAMNGELLNHETAAFSGGFVGDVALV--SSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 208 d~~tG~~~w~~~v~~~~~~~~~~~~v--g~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
|..+|+.+.+..... ..+. .+.+- +..+++... ..+.+++-|+.+++
T Consensus 243 d~~~~~~~~~~~~h~-~~v~-~v~fsp~g~~~lasgs-~D~~i~vwd~~~~~ 291 (344)
T 4gqb_B 243 DTKSTSCVLSSAVHS-QCVT-GLVFSPHSVPFLASLS-EDCSLAVLDSSLSE 291 (344)
T ss_dssp ESCC--CCEEEECCS-SCEE-EEEECSSSSCCEEEEE-TTSCEEEECTTCCE
T ss_pred ECCCCcEEEEEcCCC-CCEE-EEEEccCCCeEEEEEe-CCCeEEEEECCCCc
Confidence 999999887653211 1121 12221 223455444 35778888887776
No 59
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.84 E-value=0.0042 Score=64.63 Aligned_cols=182 Identities=12% Similarity=0.084 Sum_probs=108.4
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccC
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~ 131 (795)
+++.+++++.+|.|...|.++|+...+...... .+..+.....+..++.++.++.++.||..+|+.+.+........
T Consensus 152 ~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~-- 228 (337)
T 1gxr_A 152 DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD-GASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIF-- 228 (337)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEECCCSS-CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEE--
T ss_pred CCCEEEEEeCCCcEEEEeCCCCceeeeeecccC-ceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceE--
Confidence 466799999999999999999998877654222 24443222344455556667799999999999999887654432
Q ss_pred CceeccccccccCCCeEEEEe-CCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcC
Q 003791 132 PLLLVPTNLKVDKDSLILVSS-KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAM 210 (795)
Q Consensus 132 ~~~~~~~~~~~~~~~~V~V~~-~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~ 210 (795)
.+.+.+ + .+.+++.+ ++.++.+|..+++.... ...... +..+..+..+..++..+.+| .+..+|..
T Consensus 229 ~~~~s~-----~-~~~l~~~~~~~~i~~~~~~~~~~~~~-~~~~~~--v~~~~~~~~~~~l~~~~~dg----~i~~~~~~ 295 (337)
T 1gxr_A 229 SLGYCP-----T-GEWLAVGMESSNVEVLHVNKPDKYQL-HLHESC--VLSLKFAYCGKWFVSTGKDN----LLNAWRTP 295 (337)
T ss_dssp EEEECT-----T-SSEEEEEETTSCEEEEETTSSCEEEE-CCCSSC--EEEEEECTTSSEEEEEETTS----EEEEEETT
T ss_pred EEEECC-----C-CCEEEEEcCCCcEEEEECCCCCeEEE-cCCccc--eeEEEECCCCCEEEEecCCC----cEEEEECC
Confidence 122222 2 33444444 89999999999886532 222111 22332222344444444344 78899999
Q ss_pred CCceeeeeeeeccCCcccceEEe-cCcEEEEEECCCCeEEEEEe
Q 003791 211 NGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSF 253 (795)
Q Consensus 211 tG~~~w~~~v~~~~~~~~~~~~v-g~~~lv~~d~~~~~L~v~~l 253 (795)
+|+.+.... ....+.. +.+. .++.+++.. ..|.+++-++
T Consensus 296 ~~~~~~~~~--~~~~v~~-~~~s~~~~~l~~~~-~dg~i~iw~~ 335 (337)
T 1gxr_A 296 YGASIFQSK--ESSSVLS-CDISVDDKYIVTGS-GDKKATVYEV 335 (337)
T ss_dssp TCCEEEEEE--CSSCEEE-EEECTTSCEEEEEE-TTSCEEEEEE
T ss_pred CCeEEEEec--CCCcEEE-EEECCCCCEEEEec-CCCeEEEEEE
Confidence 999885442 2222211 2222 334555554 3466666554
No 60
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.83 E-value=0.017 Score=59.31 Aligned_cols=151 Identities=15% Similarity=0.146 Sum_probs=91.8
Q ss_pred CCEEEEE-eCCCEEEEEECcCCccceEEEcCCc-----ceeeeeeeeeCCEEEEEEcc--CCeEEEEeCCCCcEeEEEec
Q 003791 53 RKRVVVS-TEENVIASLDLRHGEIFWRHVLGIN-----DVVDGIDIALGKYVITLSSD--GSTLRAWNLPDGQMVWESFL 124 (795)
Q Consensus 53 ~~~v~va-t~~g~l~ALn~~tG~ivWR~~l~~~-----~~i~~l~~~~g~~~V~Vs~~--g~~v~A~d~~tG~llWe~~~ 124 (795)
++.+|++ +.++.|..+|++ |+.+++...... ....++.+...++.++++.. ++.|+.|| .+|+.++....
T Consensus 40 ~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~ 117 (286)
T 1q7f_A 40 QNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGA 117 (286)
T ss_dssp TCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEECT
T ss_pred CCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecC
Confidence 5568887 467899999986 888887654221 11223322124455666542 57899999 68999887754
Q ss_pred cCccccCCceeccccccccCCCeEEEEe--CCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCcee
Q 003791 125 RGSKHSKPLLLVPTNLKVDKDSLILVSS--KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQF 202 (795)
Q Consensus 125 ~~~~~s~~~~~~~~~~~~~~~~~V~V~~--~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~ 202 (795)
.... .+.-+ ..+.++.+++.. ++.|+.+| .+|+..+.+........|..+. ...++.+|+.....+
T Consensus 118 ~~~~---~~~~i----~~~~~g~l~v~~~~~~~i~~~~-~~g~~~~~~~~~~~~~~p~~i~-~~~~g~l~v~~~~~~--- 185 (286)
T 1q7f_A 118 TILQ---HPRGV----TVDNKGRIIVVECKVMRVIIFD-QNGNVLHKFGCSKHLEFPNGVV-VNDKQEIFISDNRAH--- 185 (286)
T ss_dssp TTCS---CEEEE----EECTTSCEEEEETTTTEEEEEC-TTSCEEEEEECTTTCSSEEEEE-ECSSSEEEEEEGGGT---
T ss_pred ccCC---CceEE----EEeCCCCEEEEECCCCEEEEEc-CCCCEEEEeCCCCccCCcEEEE-ECCCCCEEEEECCCC---
Confidence 3211 11111 233356677763 78999999 4688888875432222244443 234578888654333
Q ss_pred EEEEEEcCCCceeeee
Q 003791 203 HAYQINAMNGELLNHE 218 (795)
Q Consensus 203 ~v~ald~~tG~~~w~~ 218 (795)
.+..+|+ +|+.+.+.
T Consensus 186 ~i~~~~~-~g~~~~~~ 200 (286)
T 1q7f_A 186 CVKVFNY-EGQYLRQI 200 (286)
T ss_dssp EEEEEET-TCCEEEEE
T ss_pred EEEEEcC-CCCEEEEE
Confidence 6888897 67766554
No 61
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.83 E-value=0.023 Score=62.77 Aligned_cols=185 Identities=11% Similarity=0.049 Sum_probs=115.4
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcCCc----------------------ceeeeeeeeeCCEEEEEEccCCeEE
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGIN----------------------DVVDGIDIALGKYVITLSSDGSTLR 109 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~----------------------~~i~~l~~~~g~~~V~Vs~~g~~v~ 109 (795)
+.+.+++++.+|.|...|.++++.......... ..+..+ ...+..++.++.++.++
T Consensus 216 ~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~ 293 (464)
T 3v7d_B 216 NIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLI 293 (464)
T ss_dssp SCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEE
T ss_pred CCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEE
Confidence 346699999999999999999987765432211 111122 22334555566667999
Q ss_pred EEeCCCCcEeEEEeccCccccCCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecC
Q 003791 110 AWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDES 188 (795)
Q Consensus 110 A~d~~tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~ 188 (795)
.||..+|+.+.+........ ....+.+ + ...++.. .+|.+...|..+|+...+........ ..+ ...+
T Consensus 294 vwd~~~~~~~~~~~~~~~~v-~~~~~~~-----~-~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v--~~~--~~~~ 362 (464)
T 3v7d_B 294 VWDVAQMKCLYILSGHTDRI-YSTIYDH-----E-RKRCISASMDTTIRIWDLENGELMYTLQGHTALV--GLL--RLSD 362 (464)
T ss_dssp EEETTTTEEEEEECCCSSCE-EEEEEET-----T-TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCE--EEE--EECS
T ss_pred EEECCCCcEEEEecCCCCCE-EEEEEcC-----C-CCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcE--EEE--EEcC
Confidence 99999999998887554332 1111211 1 3445555 48999999999999999886544332 222 2345
Q ss_pred CEEEEEEecCCceeEEEEEEcCCCceeeeeeeeccCCcccceEEecCcEEEEEECCCCeEEEEEeecCe
Q 003791 189 DQIYVVGYAGSSQFHAYQINAMNGELLNHETAAFSGGFVGDVALVSSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 189 ~~Vyvv~~~g~~~~~v~ald~~tG~~~w~~~v~~~~~~~~~~~~vg~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
+.++..+.+| .+..+|..+++...... ........++..++.++++.. .+.+++-++.+|+
T Consensus 363 ~~l~s~s~dg----~v~vwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~--dg~i~iwd~~~g~ 423 (464)
T 3v7d_B 363 KFLVSAAADG----SIRGWDANDYSRKFSYH--HTNLSAITTFYVSDNILVSGS--ENQFNIYNLRSGK 423 (464)
T ss_dssp SEEEEEETTS----EEEEEETTTCCEEEEEE--CTTCCCEEEEEECSSEEEEEE--TTEEEEEETTTCC
T ss_pred CEEEEEeCCC----cEEEEECCCCceeeeec--CCCCccEEEEEeCCCEEEEec--CCeEEEEECCCCc
Confidence 6666655555 78899999998776653 111121122333556666665 5799999999987
No 62
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.80 E-value=0.0056 Score=63.87 Aligned_cols=192 Identities=14% Similarity=0.107 Sum_probs=113.8
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccC
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~ 131 (795)
+++.+++++.+|.|.-.|.++|+.+-+..-... .+..+.....+..++.++.++.++.||..+|+.+.......... .
T Consensus 76 ~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v-~ 153 (312)
T 4ery_A 76 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSN-YVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPV-S 153 (312)
T ss_dssp TSSEEEEEETTSEEEEEETTTCCEEEEEECCSS-CEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCE-E
T ss_pred CCCEEEEECCCCEEEEEECCCCcEEEEEcCCCC-CEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcE-E
Confidence 467799999999999999999998766543322 23333222333455546667799999999999988876554332 1
Q ss_pred CceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcC
Q 003791 132 PLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAM 210 (795)
Q Consensus 132 ~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~ 210 (795)
.+.+.+ + ...++.. .+|.+...|..+|+..-......... ...+..+..+..+++.+.+| .+..+|..
T Consensus 154 ~~~~~~-----~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~d~----~i~iwd~~ 222 (312)
T 4ery_A 154 AVHFNR-----D-GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP-VSFVKFSPNGKYILAATLDN----TLKLWDYS 222 (312)
T ss_dssp EEEECT-----T-SSEEEEEETTSCEEEEETTTCCEEEEECCSSCCC-EEEEEECTTSSEEEEEETTT----EEEEEETT
T ss_pred EEEEcC-----C-CCEEEEEeCCCcEEEEECCCCceeeEEeccCCCc-eEEEEECCCCCEEEEEcCCC----eEEEEECC
Confidence 111111 1 2334444 48999999999998877664332211 11122122344455444444 78889999
Q ss_pred CCceeeeeeeeccCCcccceEE-e-cCcEEEEEECCCCeEEEEEeecCe
Q 003791 211 NGELLNHETAAFSGGFVGDVAL-V-SSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 211 tG~~~w~~~v~~~~~~~~~~~~-v-g~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
+|+.+............-...+ . ++..+++.. ..+.+++-++.+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~-~dg~i~vwd~~~~~ 270 (312)
T 4ery_A 223 KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGS-EDNLVYIWNLQTKE 270 (312)
T ss_dssp TTEEEEEECSSCCSSSCCCEEEECSSSCEEEECC-TTSCEEEEETTTCC
T ss_pred CCcEEEEEEecCCceEEEEEEEEeCCCcEEEEEC-CCCEEEEEECCCch
Confidence 9988766532211111111111 1 334454443 46789998988876
No 63
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.79 E-value=0.0056 Score=65.91 Aligned_cols=187 Identities=12% Similarity=0.076 Sum_probs=115.5
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCcc---
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSK--- 128 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~--- 128 (795)
+++.+++++.+|.|...| .+|+.+.+...... .+..+.....+..++.++.++.++.||..+|+.+.........
T Consensus 119 ~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 196 (425)
T 1r5m_A 119 DGNSIVTGVENGELRLWN-KTGALLNVLNFHRA-PIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSS 196 (425)
T ss_dssp TSSEEEEEETTSCEEEEE-TTSCEEEEECCCCS-CEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC------
T ss_pred CCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCc-cEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccc
Confidence 466799999999999999 78888877653322 3444422233444554555679999999999999988765442
Q ss_pred ------------ccCCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEE
Q 003791 129 ------------HSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVG 195 (795)
Q Consensus 129 ------------~s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~ 195 (795)
. ..... ..++.+++. .+|.++.+|..+++............ ..+..+..+..++..+
T Consensus 197 ~~~~~~~~~~~~~-~~~~~-------~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i--~~~~~~~~~~~l~~~~ 266 (425)
T 1r5m_A 197 INAENHSGDGSLG-VDVEW-------VDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPI--SVLEFNDTNKLLLSAS 266 (425)
T ss_dssp ---------CCCB-SCCEE-------EETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCE--EEEEEETTTTEEEEEE
T ss_pred eeeccccCCccee-eEEEE-------cCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCce--EEEEECCCCCEEEEEc
Confidence 1 11111 224555555 48999999999999888776443322 2232223444455444
Q ss_pred ecCCceeEEEEEEcCCCceeeeeeeeccCCcccceEEecCcEEEEEECCCCeEEEEEeecCe
Q 003791 196 YAGSSQFHAYQINAMNGELLNHETAAFSGGFVGDVALVSSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 196 ~~g~~~~~v~ald~~tG~~~w~~~v~~~~~~~~~~~~vg~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
.+| .+..+|..+|+.+..... ....+. .+.+..++.+++.. ..+.+++.++.+++
T Consensus 267 ~d~----~i~i~d~~~~~~~~~~~~-~~~~i~-~~~~~~~~~l~~~~-~d~~i~i~d~~~~~ 321 (425)
T 1r5m_A 267 DDG----TLRIWHGGNGNSQNCFYG-HSQSIV-SASWVGDDKVISCS-MDGSVRLWSLKQNT 321 (425)
T ss_dssp TTS----CEEEECSSSBSCSEEECC-CSSCEE-EEEEETTTEEEEEE-TTSEEEEEETTTTE
T ss_pred CCC----EEEEEECCCCccceEecC-CCccEE-EEEECCCCEEEEEe-CCCcEEEEECCCCc
Confidence 444 688889999988766531 111221 12222334555554 46899999998876
No 64
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.79 E-value=0.068 Score=58.81 Aligned_cols=188 Identities=12% Similarity=-0.022 Sum_probs=119.4
Q ss_pred eccCCCEEEEEeC-----CCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEc----------cCCeEEEEeC
Q 003791 49 QKTGRKRVVVSTE-----ENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSS----------DGSTLRAWNL 113 (795)
Q Consensus 49 ~~~~~~~v~vat~-----~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~----------~g~~v~A~d~ 113 (795)
|.++.+++||++. .+.|..||++|++++.+...+... ++.+.-++..+|+++ .++.|..||+
T Consensus 40 ~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P---~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~ 116 (386)
T 3sjl_D 40 PAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP---NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDP 116 (386)
T ss_dssp CCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC---EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred cCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC---cEEECCCCCEEEEEcccccccccCCCCCEEEEEEC
Confidence 4456889999987 589999999999999999886552 232334555677754 2357999999
Q ss_pred CCCcEeEEEeccCcc------ccCCceeccccccccCCCeEEEEe---CCEEEEEECCCCcEEEEEeccCcceeeeeEEE
Q 003791 114 PDGQMVWESFLRGSK------HSKPLLLVPTNLKVDKDSLILVSS---KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQ 184 (795)
Q Consensus 114 ~tG~llWe~~~~~~~------~s~~~~~~~~~~~~~~~~~V~V~~---~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~ 184 (795)
.+++++-+..+.... ......+ ..+ ++.++|.. ++.|..+|.++++++-+.+.+.... +.
T Consensus 117 ~t~~v~~~I~v~~g~r~~~g~~P~~~a~-----spD-Gk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~----~~- 185 (386)
T 3sjl_D 117 VTLLPTADIELPDAPRFLVGTYPWMTSL-----TPD-GKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYH----IF- 185 (386)
T ss_dssp TTCCEEEEEEETTCCCCCBSCCGGGEEE-----CTT-SSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEE----EE-
T ss_pred CCCeEEEEEECCCccccccCCCCceEEE-----cCC-CCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcce----ee-
Confidence 999999988775310 0011111 223 46788863 5899999999999998887764311 11
Q ss_pred EecCCEEEEEEecCCceeEEEEEEcCC-CceeeeeeeeccCCccc-----ceEEe-cCcEEEEEECCCCeEEEEEeecCe
Q 003791 185 LDESDQIYVVGYAGSSQFHAYQINAMN-GELLNHETAAFSGGFVG-----DVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 185 s~~~~~Vyvv~~~g~~~~~v~ald~~t-G~~~w~~~v~~~~~~~~-----~~~~v-g~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
.......+.++.+| ++..++..+ |++..... ....... ...++ .++.++++. +.|.++++|+.++.
T Consensus 186 P~g~~~~~~~~~DG----~~~~v~~~~~g~v~~~~~--~~~~~~~~~~~~~~~~~~~dG~~~~vs-~~g~V~v~d~~~~~ 258 (386)
T 3sjl_D 186 PTAPDTFFMHCRDG----SLAKVAFGTEGTPEITHT--EVFHPEDEFLINHPAYSQKAGRLVWPT-YTGKIHQIDLSSGD 258 (386)
T ss_dssp EEETTEEEEEETTS----CEEEEECCSSSCCEEEEC--CCCSCTTSCBCSCCEEETTTTEEEEEB-TTSEEEEEECTTSS
T ss_pred cCCCceeEEECCCC----CEEEEECCCCCeEEEeec--ceeccccccccccceeEcCCCcEEEEe-CCCEEEEEECCCCc
Confidence 12344555666666 566677765 77643221 1111111 12333 234454544 46899999997765
No 65
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.77 E-value=0.004 Score=67.79 Aligned_cols=196 Identities=11% Similarity=0.112 Sum_probs=116.1
Q ss_pred CCCEEEEEeCCCEEEEEECcCCcc-------ceEEEcCCcceeeeeeee-eCCEEEEEEccCCeEEEEeCCCCcEeEEEe
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEI-------FWRHVLGINDVVDGIDIA-LGKYVITLSSDGSTLRAWNLPDGQMVWESF 123 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~i-------vWR~~l~~~~~i~~l~~~-~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~ 123 (795)
+++.+++++.+|.|.-.|..+|+. +....-. ...+..+... .++..++.++.++.|+.||..+|+.+....
T Consensus 93 ~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 171 (402)
T 2aq5_A 93 NDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGH-TKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLG 171 (402)
T ss_dssp CTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECC-SSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred CCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCC-CCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEe
Confidence 466799999999999999999943 3333221 1223333222 233455556667799999999999988873
Q ss_pred --ccCccccCCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCc
Q 003791 124 --LRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSS 200 (795)
Q Consensus 124 --~~~~~~s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~ 200 (795)
...... ..+.+.+ + +..+++. .+|.+...|..+|+...+.........+..+.. ..++.+++.++.++.
T Consensus 172 ~~~~~~~v-~~~~~~~-----~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~g~~~~~ 243 (402)
T 2aq5_A 172 PDVHPDTI-YSVDWSR-----D-GALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVF-VSEGKILTTGFSRMS 243 (402)
T ss_dssp TTTCCSCE-EEEEECT-----T-SSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEE-CSTTEEEEEEECTTC
T ss_pred cCCCCCce-EEEEECC-----C-CCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEE-cCCCcEEEEeccCCC
Confidence 332221 1111111 2 2344444 499999999999999988733222111223322 345666666643333
Q ss_pred eeEEEEEEcCCCce-eeeeeeeccCCcccceEEe-cCcEEEEEECCCCeEEEEEeecCe
Q 003791 201 QFHAYQINAMNGEL-LNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 201 ~~~v~ald~~tG~~-~w~~~v~~~~~~~~~~~~v-g~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
...+..+|..+++. +..........+.. +.+- .++.+++.....+.+++.++.+++
T Consensus 244 d~~i~iwd~~~~~~~~~~~~~~~~~~v~~-~~~s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 244 ERQVALWDTKHLEEPLSLQELDTSSGVLL-PFFDPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp CEEEEEEETTBCSSCSEEEECCCCSSCEE-EEEETTTTEEEEEETTCSCEEEEEECSST
T ss_pred CceEEEEcCccccCCceEEeccCCCceeE-EEEcCCCCEEEEEEcCCCeEEEEEecCCC
Confidence 44888999998875 33332222222222 2222 445665555456889999998876
No 66
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.77 E-value=0.02 Score=60.21 Aligned_cols=157 Identities=9% Similarity=0.082 Sum_probs=96.7
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccC-----CeEEEEeCCCCcEeEEEeccC
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDG-----STLRAWNLPDGQMVWESFLRG 126 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g-----~~v~A~d~~tG~llWe~~~~~ 126 (795)
+++.+++++.+|.|...|.++|+.+.+...... +..+.....+..+++++.+ +.++.||..++....+.....
T Consensus 85 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~ 162 (369)
T 3zwl_B 85 FTKYCVTGSADYSIKLWDVSNGQCVATWKSPVP--VKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVS 162 (369)
T ss_dssp TSSEEEEEETTTEEEEEETTTCCEEEEEECSSC--EEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEEC
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEeecCCC--eEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccc
Confidence 466799999999999999999999999885444 4433223344455545555 799999999887554443322
Q ss_pred ccccC---------CceeccccccccCCCeEEEE-eCCEEEEEECCC-CcEEEEEeccCcceeeeeEEEEecCCEEEEEE
Q 003791 127 SKHSK---------PLLLVPTNLKVDKDSLILVS-SKGCLHAVSSID-GEILWTRDFAAESVEVQQVIQLDESDQIYVVG 195 (795)
Q Consensus 127 ~~~s~---------~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~t-G~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~ 195 (795)
..... ....+. ...+ .+.+++. .+|.+..+|..+ ++............ ..+..+..+..+++.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~--~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~ 237 (369)
T 3zwl_B 163 EEPIHKIITHEGLDAATVAG--WSTK-GKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSI--SDMQFSPDLTYFITSS 237 (369)
T ss_dssp SSCSEEEECCTTCCCEEEEE--ECGG-GCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCE--EEEEECTTSSEEEEEE
T ss_pred cceeeeccCCcCccceeEEE--EcCC-CCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCce--eEEEECCCCCEEEEec
Confidence 11000 111110 0111 2344444 489999999999 67777776544332 2232223344455444
Q ss_pred ecCCceeEEEEEEcCCCceeeeee
Q 003791 196 YAGSSQFHAYQINAMNGELLNHET 219 (795)
Q Consensus 196 ~~g~~~~~v~ald~~tG~~~w~~~ 219 (795)
.+| .+..+|..+|+.+....
T Consensus 238 ~d~----~i~v~d~~~~~~~~~~~ 257 (369)
T 3zwl_B 238 RDT----NSFLVDVSTLQVLKKYE 257 (369)
T ss_dssp TTS----EEEEEETTTCCEEEEEE
T ss_pred CCc----eEEEEECCCCceeeeec
Confidence 444 78899999999887774
No 67
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.75 E-value=0.064 Score=56.60 Aligned_cols=189 Identities=12% Similarity=0.178 Sum_probs=94.5
Q ss_pred EEEEEeCC------CEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEcc---CCeEEEEeCCCCcEeEEEec-
Q 003791 55 RVVVSTEE------NVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSD---GSTLRAWNLPDGQMVWESFL- 124 (795)
Q Consensus 55 ~v~vat~~------g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~---g~~v~A~d~~tG~llWe~~~- 124 (795)
++||++-. -.++.+|+++|++..............+....++. +++++. ++.|+.||..+|++.--...
T Consensus 4 ~~~vg~y~~~~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~ 82 (347)
T 3hfq_A 4 RILFGTYTKKTSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVV 82 (347)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEeccCCCCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeee
Confidence 46777532 13888999999876644333222222332222344 554432 46899999988875332221
Q ss_pred -cCccccCCceeccccccccCCCeEEEEe--CCEEEEEEC-CCCcEEEEEeccCcc---------eeeeeEEEEecCCEE
Q 003791 125 -RGSKHSKPLLLVPTNLKVDKDSLILVSS--KGCLHAVSS-IDGEILWTRDFAAES---------VEVQQVIQLDESDQI 191 (795)
Q Consensus 125 -~~~~~s~~~~~~~~~~~~~~~~~V~V~~--~g~l~ald~-~tG~~~W~~~~~~~~---------~~~~~vv~s~~~~~V 191 (795)
..... ..+.+- .+ ++.+++.. ++.+..++. .+|............ ..+..+.. ..++.+
T Consensus 83 ~~~~~p-~~~a~s-----pd-g~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-spdg~l 154 (347)
T 3hfq_A 83 APGTPP-AYVAVD-----EA-RQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDL-TPDNRL 154 (347)
T ss_dssp EESCCC-SEEEEE-----TT-TTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEE-CTTSCE
T ss_pred cCCCCC-EEEEEC-----CC-CCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEE-CCCCcE
Confidence 11111 111111 12 34566654 688888887 466544332221110 01222332 234447
Q ss_pred EEEEecCCceeEEEEEEcC-CCceeeeeeeeccCCcc-cceEEe-cCcEEEEEECCCCeEEEEEeec
Q 003791 192 YVVGYAGSSQFHAYQINAM-NGELLNHETAAFSGGFV-GDVALV-SSDTLVTLDTTRSILVTVSFKN 255 (795)
Q Consensus 192 yvv~~~g~~~~~v~ald~~-tG~~~w~~~v~~~~~~~-~~~~~v-g~~~lv~~d~~~~~L~v~~l~s 255 (795)
|+.+..++ .+..+|.. +|+......+..+.+.. ..+.+- +++.+++.+...+.+.+.++..
T Consensus 155 ~v~~~~~~---~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~ 218 (347)
T 3hfq_A 155 AVIDLGSD---KVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDT 218 (347)
T ss_dssp EEEETTTT---EEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred EEEeCCCC---EEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 76554333 56666666 67655433333222111 112222 3445666676778888888874
No 68
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.75 E-value=0.048 Score=60.87 Aligned_cols=189 Identities=13% Similarity=0.023 Sum_probs=116.2
Q ss_pred eccCCCEEEEEeCC-----CEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEc----------cCCeEEEEeC
Q 003791 49 QKTGRKRVVVSTEE-----NVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSS----------DGSTLRAWNL 113 (795)
Q Consensus 49 ~~~~~~~v~vat~~-----g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~----------~g~~v~A~d~ 113 (795)
|.++.+++||+... |.|..+|++|++++++...+.. . ++.+.-++..+||+. .++.|..+|+
T Consensus 80 p~~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~--P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~ 156 (426)
T 3c75_H 80 PAPDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFL--P-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDP 156 (426)
T ss_dssp CCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSS--C-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred CCCCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCC--C-ceEECCCCCEEEEEeccccccccCCCCCEEEEEEC
Confidence 34557789999874 6999999999999999998765 2 443344556777764 2458999999
Q ss_pred CCCcEeEEEeccCcc------ccCCceeccccccccCCCeEEEEe---CCEEEEEECCCCcEEEEEeccCcceeeeeEEE
Q 003791 114 PDGQMVWESFLRGSK------HSKPLLLVPTNLKVDKDSLILVSS---KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQ 184 (795)
Q Consensus 114 ~tG~llWe~~~~~~~------~s~~~~~~~~~~~~~~~~~V~V~~---~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~ 184 (795)
.+++++-+..+.++. ....+.+ ..+ ++.+||.. ++.|..+|.++++++-+...+... .+.
T Consensus 157 ~t~~vv~~I~v~g~~r~~~g~~P~~~~~-----spD-Gk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~----~~~- 225 (426)
T 3c75_H 157 VTFLPIADIELPDAPRFLVGTYQWMNAL-----TPD-NKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCY----HIF- 225 (426)
T ss_dssp TTCCEEEEEEETTCCCCCBSCCGGGSEE-----CTT-SSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEE----EEE-
T ss_pred CCCcEEEEEECCCccccccCCCcceEEE-----cCC-CCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCce----eec-
Confidence 999999998875110 0011111 223 46788863 579999999999999988775421 111
Q ss_pred EecCCEEEE-EEecCCceeEEEEEEcCCCceeeeee--eecc-CCcccceEEe-cCcEEEEEECCCCeEEEEEeecCe
Q 003791 185 LDESDQIYV-VGYAGSSQFHAYQINAMNGELLNHET--AAFS-GGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 185 s~~~~~Vyv-v~~~g~~~~~v~ald~~tG~~~w~~~--v~~~-~~~~~~~~~v-g~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
..+...|+ .+.+| ++..+|..+|+..+... +... ..+.....+. .+..++.. ...+.++++|+.++.
T Consensus 226 -p~g~~~~v~~~~dG----~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~-s~~g~V~ViD~~~~~ 297 (426)
T 3c75_H 226 -PASPTVFYMNCRDG----SLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWP-TYTGKIFQADLTAEG 297 (426)
T ss_dssp -EEETTEEEEEETTS----SEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEE-BTTSEEEEEEECSSC
T ss_pred -cCCCcEEEEEcCCC----CEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEE-eCCCcEEEEeccCCc
Confidence 12223443 33333 46666777888775432 0000 0010111122 12333333 356889999997765
No 69
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.72 E-value=0.0032 Score=67.72 Aligned_cols=155 Identities=12% Similarity=0.116 Sum_probs=96.9
Q ss_pred cCCCE-EEEEeCCCEEEEEECcC------Cccce-----EEEc-----C-CcceeeeeeeeeCCEEEEEEccCCeEEEEe
Q 003791 51 TGRKR-VVVSTEENVIASLDLRH------GEIFW-----RHVL-----G-INDVVDGIDIALGKYVITLSSDGSTLRAWN 112 (795)
Q Consensus 51 ~~~~~-v~vat~~g~l~ALn~~t------G~ivW-----R~~l-----~-~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d 112 (795)
++++. +++++.+|.|...|.++ ++.+. +... . ....+..+.....+ .+++++.++.++.||
T Consensus 135 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d 213 (397)
T 1sq9_A 135 RLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISE 213 (397)
T ss_dssp ---CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEE
T ss_pred CCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEE
Confidence 34667 88899999999999998 77765 4431 1 12223333222334 566566778999999
Q ss_pred CCCCcEeEEEec---c---CccccCCceeccccccccCCCeEEEE-eC---CEEEEEECCCCcEEEEEec----------
Q 003791 113 LPDGQMVWESFL---R---GSKHSKPLLLVPTNLKVDKDSLILVS-SK---GCLHAVSSIDGEILWTRDF---------- 172 (795)
Q Consensus 113 ~~tG~llWe~~~---~---~~~~s~~~~~~~~~~~~~~~~~V~V~-~~---g~l~ald~~tG~~~W~~~~---------- 172 (795)
..+|+.++.... . .... ..+.+.+ + ...+++. .+ |.+..+|..+|+...++..
T Consensus 214 ~~~~~~~~~~~~~~~h~~~~~~i-~~i~~~~-----~-~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 286 (397)
T 1sq9_A 214 LSTLRPLYNFESQHSMINNSNSI-RSVKFSP-----Q-GSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLG 286 (397)
T ss_dssp TTTTEEEEEEECCC---CCCCCE-EEEEECS-----S-TTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------C
T ss_pred CCCCceeEEEeccccccccCCcc-ceEEECC-----C-CCEEEEEecCCCCceEEEEECCCCcccceeccCccccccccc
Confidence 999999999886 3 2222 1111211 2 3444444 47 8999999999999988875
Q ss_pred ---cCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcCCCceeeeee
Q 003791 173 ---AAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHET 219 (795)
Q Consensus 173 ---~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~tG~~~w~~~ 219 (795)
.... ...+..+..+..++..+.+| .+..+|..+|+.+....
T Consensus 287 ~~~~~~~--v~~~~~~~~~~~l~~~~~dg----~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 287 EFAHSSW--VMSLSFNDSGETLCSAGWDG----KLRFWDVKTKERITTLN 330 (397)
T ss_dssp CBSBSSC--EEEEEECSSSSEEEEEETTS----EEEEEETTTTEEEEEEE
T ss_pred ccccCCc--EEEEEECCCCCEEEEEeCCC----eEEEEEcCCCceeEEEe
Confidence 2221 22332223344455444444 78899999999887765
No 70
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.72 E-value=0.017 Score=62.75 Aligned_cols=190 Identities=14% Similarity=0.109 Sum_probs=112.4
Q ss_pred CCEEEEEeCCCEEEEEECcCCc-cceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccC
Q 003791 53 RKRVVVSTEENVIASLDLRHGE-IFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~-ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~ 131 (795)
++.+++++.+|.|...|.+++. ...... .....+..+.....+..++.++.++.|+.||..+|+.++......... .
T Consensus 186 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v-~ 263 (401)
T 4aez_A 186 RHVLSSGSRSGAIHHHDVRIANHQIGTLQ-GHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAV-K 263 (401)
T ss_dssp TTEEEEEETTSEEEEEETTSSSCEEEEEE-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCC-C
T ss_pred CCEEEEEcCCCCEEEEecccCcceeeEEc-CCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceE-E
Confidence 5679999999999999998544 443332 223334444222344455556666799999999999999886554333 2
Q ss_pred CceeccccccccCCCeEEEE-e---CCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEE
Q 003791 132 PLLLVPTNLKVDKDSLILVS-S---KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQI 207 (795)
Q Consensus 132 ~~~~~~~~~~~~~~~~V~V~-~---~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~al 207 (795)
.+.+.+ + +..+++. + ++.+...|..+|+.......... ...+..+..+..+++.+ |.....+..+
T Consensus 264 ~~~~~p-----~-~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~---v~~~~~s~~~~~l~~~~--g~~dg~i~v~ 332 (401)
T 4aez_A 264 AVAWCP-----W-QSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQ---VTSLIWSPHSKEIMSTH--GFPDNNLSIW 332 (401)
T ss_dssp EEEECT-----T-STTEEEEECCTTTCEEEEEETTTCCEEEEEECSSC---EEEEEECSSSSEEEEEE--CTTTCEEEEE
T ss_pred EEEECC-----C-CCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCc---EEEEEECCCCCeEEEEe--ecCCCcEEEE
Confidence 222222 2 2334443 3 89999999999999998865433 22332223344444432 1111267788
Q ss_pred EcCCCceeeeeeeecc-CCcccceEEe-cCcEEEEEECCCCeEEEEEeecCe
Q 003791 208 NAMNGELLNHETAAFS-GGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 208 d~~tG~~~w~~~v~~~-~~~~~~~~~v-g~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
|..+|+......+... ..+. .+.+- .+..+++.. ..|.+.+-++.+++
T Consensus 333 ~~~~~~~~~~~~~~~h~~~v~-~~~~s~dg~~l~s~~-~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 333 SYSSSGLTKQVDIPAHDTRVL-YSALSPDGRILSTAA-SDENLKFWRVYDGD 382 (401)
T ss_dssp EEETTEEEEEEEEECCSSCCC-EEEECTTSSEEEEEC-TTSEEEEEECCC--
T ss_pred ecCCccceeEEEecCCCCCEE-EEEECCCCCEEEEEe-CCCcEEEEECCCCc
Confidence 8888876655443322 1221 12222 344555554 46889999998876
No 71
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.70 E-value=0.006 Score=66.19 Aligned_cols=193 Identities=11% Similarity=0.104 Sum_probs=114.4
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccC
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~ 131 (795)
+++.+++++.+|.|...|.++|+...... .....+..+.....+..++.++.++.++.||..+|+.+.+........ .
T Consensus 108 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v-~ 185 (420)
T 3vl1_A 108 QMRRFILGTTEGDIKVLDSNFNLQREIDQ-AHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATV-T 185 (420)
T ss_dssp SSCEEEEEETTSCEEEECTTSCEEEEETT-SSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCE-E
T ss_pred CCCEEEEEECCCCEEEEeCCCcceeeecc-cccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcE-E
Confidence 46678999999999999999998754421 222334444223344455556667899999999999988877544332 1
Q ss_pred CceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEeccCcce-eeeeEEEE--------------------ecCC
Q 003791 132 PLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESV-EVQQVIQL--------------------DESD 189 (795)
Q Consensus 132 ~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~~~~-~~~~vv~s--------------------~~~~ 189 (795)
.+.+.+ + .+.++.. .+|.+...|..+|+..+.+....... ....+... ..++
T Consensus 186 ~~~~~~-----~-~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 259 (420)
T 3vl1_A 186 DIAIID-----R-GRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYG 259 (420)
T ss_dssp EEEEET-----T-TTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTT
T ss_pred EEEEcC-----C-CCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCC
Confidence 222222 2 2344444 48999999999999999887532211 01111000 1233
Q ss_pred EEEEEEecCCceeEEEEEEcCCCceeeeeeeeccCCcccceEEe-cCc-EEEEEECCCCeEEEEEeecCe
Q 003791 190 QIYVVGYAGSSQFHAYQINAMNGELLNHETAAFSGGFVGDVALV-SSD-TLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 190 ~Vyvv~~~g~~~~~v~ald~~tG~~~w~~~v~~~~~~~~~~~~v-g~~-~lv~~d~~~~~L~v~~l~sg~ 257 (795)
..++.+...+ .+..+|..+|+.+.+........+.. +.+- .+. ++++.. ..|.+++-++.+++
T Consensus 260 ~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~l~~g~-~dg~i~vwd~~~~~ 324 (420)
T 3vl1_A 260 KYVIAGHVSG---VITVHNVFSKEQTIQLPSKFTCSCNS-LTVDGNNANYIYAGY-ENGMLAQWDLRSPE 324 (420)
T ss_dssp EEEEEEETTS---CEEEEETTTCCEEEEECCTTSSCEEE-EEECSSCTTEEEEEE-TTSEEEEEETTCTT
T ss_pred CEEEEEcCCC---eEEEEECCCCceeEEcccccCCCcee-EEEeCCCCCEEEEEe-CCCeEEEEEcCCCc
Confidence 3444443333 68888999998876663211122211 1221 233 666665 45889999988764
No 72
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.66 E-value=0.031 Score=57.38 Aligned_cols=154 Identities=13% Similarity=0.151 Sum_probs=94.0
Q ss_pred CCCEEEEEeC--CCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEE-ccCCeEEEEeCCCCcEeEEEeccCcc
Q 003791 52 GRKRVVVSTE--ENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLS-SDGSTLRAWNLPDGQMVWESFLRGSK 128 (795)
Q Consensus 52 ~~~~v~vat~--~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs-~~g~~v~A~d~~tG~llWe~~~~~~~ 128 (795)
.++.+|+++. ++.|..+| .+|+.+++..........++.. ..++.++++ ..++.|+.||. +|+.++.......
T Consensus 87 ~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~-~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~- 162 (286)
T 1q7f_A 87 NSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTV-DNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKH- 162 (286)
T ss_dssp TTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEE-CTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTT-
T ss_pred CCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEE-eCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCc-
Confidence 3678999985 78999999 6899888765433222333422 223345555 34578999995 6888887754321
Q ss_pred ccCCceeccccccccCCCeEEEEe--CCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEE
Q 003791 129 HSKPLLLVPTNLKVDKDSLILVSS--KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQ 206 (795)
Q Consensus 129 ~s~~~~~~~~~~~~~~~~~V~V~~--~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~a 206 (795)
. ..+..+ ..+.++.+++.. ++.|+.+|. +|+..+++........|..+. ...++.+|+....++ -.+..
T Consensus 163 ~-~~p~~i----~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~-~d~~G~l~v~~~~~~--~~i~~ 233 (286)
T 1q7f_A 163 L-EFPNGV----VVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVG-INSNGEILIADNHNN--FNLTI 233 (286)
T ss_dssp C-SSEEEE----EECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEE-ECTTCCEEEEECSSS--CEEEE
T ss_pred c-CCcEEE----EECCCCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEE-ECCCCCEEEEeCCCC--EEEEE
Confidence 1 111111 334457788863 789999996 788877775432112244443 234668887654321 15777
Q ss_pred EEcCCCceeeeee
Q 003791 207 INAMNGELLNHET 219 (795)
Q Consensus 207 ld~~tG~~~w~~~ 219 (795)
+|+ +|+.++...
T Consensus 234 ~~~-~g~~~~~~~ 245 (286)
T 1q7f_A 234 FTQ-DGQLISALE 245 (286)
T ss_dssp ECT-TSCEEEEEE
T ss_pred ECC-CCCEEEEEc
Confidence 884 688776664
No 73
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.65 E-value=0.051 Score=68.18 Aligned_cols=156 Identities=12% Similarity=0.063 Sum_probs=99.9
Q ss_pred cCCCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCcccc
Q 003791 51 TGRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHS 130 (795)
Q Consensus 51 ~~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s 130 (795)
++++.+++++.+|.|.-.|..+|+.+.+..-. ...+..+....++..++.++.++.|+.||..+|+.+..........
T Consensus 625 ~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h-~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v- 702 (1249)
T 3sfz_A 625 QDGQRIASCGADKTLQVFKAETGEKLLDIKAH-EDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQV- 702 (1249)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCCEEEEECCC-SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCE-
T ss_pred CCCCEEEEEeCCCeEEEEECCCCCEEEEeccC-CCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcE-
Confidence 34667889999999999999999988776532 2234444223334455545566799999999999999887655433
Q ss_pred CCceeccccccccCCCeEEEE--eCCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEE
Q 003791 131 KPLLLVPTNLKVDKDSLILVS--SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQIN 208 (795)
Q Consensus 131 ~~~~~~~~~~~~~~~~~V~V~--~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald 208 (795)
....+. .+.++.+++. .+|.+...|..+|+...+........ ..+..+..+..++..+.+| .+...|
T Consensus 703 ~~~~~~-----~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v--~~~~~sp~~~~l~s~s~dg----~v~vwd 771 (1249)
T 3sfz_A 703 NCCHFT-----NKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSV--NHCRFSPDDELLASCSADG----TLRLWD 771 (1249)
T ss_dssp EEEEEC-----SSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCE--EEEEECSSTTEEEEEESSS----EEEEEE
T ss_pred EEEEEe-----cCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCE--EEEEEecCCCEEEEEECCC----eEEEEe
Confidence 111111 2223334443 38999999999999888776443332 2222223444455444444 688889
Q ss_pred cCCCceeeeee
Q 003791 209 AMNGELLNHET 219 (795)
Q Consensus 209 ~~tG~~~w~~~ 219 (795)
..+|+......
T Consensus 772 ~~~~~~~~~~~ 782 (1249)
T 3sfz_A 772 VRSANERKSIN 782 (1249)
T ss_dssp GGGTEEEEEEE
T ss_pred CCCCcccceec
Confidence 88888765543
No 74
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=97.62 E-value=0.0043 Score=65.17 Aligned_cols=151 Identities=13% Similarity=0.143 Sum_probs=92.1
Q ss_pred CCEE-EEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEE-ccCCeEEEEeCCCCcEeEEEeccCc---
Q 003791 53 RKRV-VVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLS-SDGSTLRAWNLPDGQMVWESFLRGS--- 127 (795)
Q Consensus 53 ~~~v-~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs-~~g~~v~A~d~~tG~llWe~~~~~~--- 127 (795)
++++ ++.+.++.|..+|+++|+++++..++.......+....++..++++ ..++.|+.||+.+|+.+++......
T Consensus 10 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~ 89 (349)
T 1jmx_B 10 GHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGE 89 (349)
T ss_dssp TCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTE
T ss_pred CCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEccccccc
Confidence 4444 4566789999999999999999887652112233222333455554 4567999999999999999886431
Q ss_pred --cccCCceeccccccccCCCeEEEEe-------------CCEEEEEECCCCcE---EEEEeccCcceeeeeEEEEecCC
Q 003791 128 --KHSKPLLLVPTNLKVDKDSLILVSS-------------KGCLHAVSSIDGEI---LWTRDFAAESVEVQQVIQLDESD 189 (795)
Q Consensus 128 --~~s~~~~~~~~~~~~~~~~~V~V~~-------------~g~l~ald~~tG~~---~W~~~~~~~~~~~~~vv~s~~~~ 189 (795)
.....+.+.+ + ++.+++.. ++.+..+|..+|+. ......+.. +..+.. ..++
T Consensus 90 ~~~~~~~~~~sp-----d-g~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~---~~~~~~-s~dg 159 (349)
T 1jmx_B 90 VGRSMYSFAISP-----D-GKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQ---VYLMRA-ADDG 159 (349)
T ss_dssp EEECSSCEEECT-----T-SSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSS---CCCEEE-CTTS
T ss_pred ccccccceEECC-----C-CCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCc---ccceeE-CCCC
Confidence 0001112221 2 34566653 38999999998653 233333321 112211 2344
Q ss_pred EEEEEEecCCceeEEEEEEcCCCceeeeee
Q 003791 190 QIYVVGYAGSSQFHAYQINAMNGELLNHET 219 (795)
Q Consensus 190 ~Vyvv~~~g~~~~~v~ald~~tG~~~w~~~ 219 (795)
.+|+. .+ .+..+|+.+|+.+....
T Consensus 160 ~l~~~--~~----~i~~~d~~~~~~~~~~~ 183 (349)
T 1jmx_B 160 SLYVA--GP----DIYKMDVKTGKYTVALP 183 (349)
T ss_dssp CEEEE--SS----SEEEECTTTCCEEEEEC
T ss_pred cEEEc--cC----cEEEEeCCCCceecccc
Confidence 57762 22 38889999999887654
No 75
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.62 E-value=0.069 Score=56.58 Aligned_cols=150 Identities=12% Similarity=0.064 Sum_probs=85.3
Q ss_pred EEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEc-cCCeEEEEeCCCCc--EeEEEeccCcccc-CCceecccc
Q 003791 64 VIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSS-DGSTLRAWNLPDGQ--MVWESFLRGSKHS-KPLLLVPTN 139 (795)
Q Consensus 64 ~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~-~g~~v~A~d~~tG~--llWe~~~~~~~~s-~~~~~~~~~ 139 (795)
.|+.+|+++|+++.......-....++.+ ..++.++++. ..++|+.||+ +|. .++.......... ......|..
T Consensus 70 ~i~~~d~~~g~~~~~~~~~~~~~p~gia~-d~~g~l~v~d~~~~~v~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~~P~~ 147 (329)
T 3fvz_A 70 TILVIDPNNAEILQSSGKNLFYLPHGLSI-DTDGNYWVTDVALHQVFKLDP-HSKEGPLLILGRSMQPGSDQNHFCQPTD 147 (329)
T ss_dssp CEEEECTTTCCEEEEECTTTCSSEEEEEE-CTTSCEEEEETTTTEEEEECT-TCSSCCSEEESBTTBCCCSTTCCSSEEE
T ss_pred cEEEEECCCCeEEeccCCCccCCceEEEE-CCCCCEEEEECCCCEEEEEeC-CCCeEEEEEecccCCCCCCccccCCCcE
Confidence 69999999999864432111112234422 2233365654 4579999997 565 5665532111000 000001111
Q ss_pred ccccC-CCeEEEEe---CCEEEEEECCCCcEEEEEeccCc-------ce-eeeeEEEEecCCEEEEEEecCCceeEEEEE
Q 003791 140 LKVDK-DSLILVSS---KGCLHAVSSIDGEILWTRDFAAE-------SV-EVQQVIQLDESDQIYVVGYAGSSQFHAYQI 207 (795)
Q Consensus 140 ~~~~~-~~~V~V~~---~g~l~ald~~tG~~~W~~~~~~~-------~~-~~~~vv~s~~~~~Vyvv~~~g~~~~~v~al 207 (795)
...+. ++.++|.. ++.+..++ .+|+..+.+..... .+ .|..+......+.+|+.....+ ++..+
T Consensus 148 ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~---~I~~~ 223 (329)
T 3fvz_A 148 VAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENG---RIQCF 223 (329)
T ss_dssp EEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTT---EEEEE
T ss_pred EEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCC---EEEEE
Confidence 23443 56777763 68899999 78999888754321 11 2444432223489998765544 78899
Q ss_pred EcCCCceeeeee
Q 003791 208 NAMNGELLNHET 219 (795)
Q Consensus 208 d~~tG~~~w~~~ 219 (795)
|+.+|+.+....
T Consensus 224 ~~~~G~~~~~~~ 235 (329)
T 3fvz_A 224 KTDTKEFVREIK 235 (329)
T ss_dssp ETTTCCEEEEEC
T ss_pred ECCCCcEEEEEe
Confidence 999999887663
No 76
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.60 E-value=0.083 Score=57.83 Aligned_cols=153 Identities=12% Similarity=0.084 Sum_probs=92.6
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccC
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~ 131 (795)
+.+.+++++.+|.|...|..+|+..-...--. +.+..+....++..++.++.++.++.||..+++.+-......... .
T Consensus 119 ~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~-~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V-~ 196 (410)
T 1vyh_C 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHT-DSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV-S 196 (410)
T ss_dssp SSSEEEEEESSSCEEEEETTTCCCCEEECCCS-SCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCE-E
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEEeccC-CcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCE-E
Confidence 35678999999999999999999875543222 234444223334455556667899999999998876654433222 1
Q ss_pred CceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcC
Q 003791 132 PLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAM 210 (795)
Q Consensus 132 ~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~ 210 (795)
...+.+ + ++.++.. .++.+...|..+|...-++....... ..+.. ..++..++.+...+ .+..+|..
T Consensus 197 ~v~~~p-----~-~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v--~~~~~-~~~g~~l~s~s~D~---~v~vwd~~ 264 (410)
T 1vyh_C 197 SVSIMP-----N-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWV--RMVRP-NQDGTLIASCSNDQ---TVRVWVVA 264 (410)
T ss_dssp EEEECS-----S-SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCE--EEEEE-CTTSSEEEEEETTS---CEEEEETT
T ss_pred EEEEeC-----C-CCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccE--EEEEE-CCCCCEEEEEcCCC---eEEEEECC
Confidence 111221 1 2334444 49999999999999877765443322 12221 23344444343322 57778888
Q ss_pred CCceeeee
Q 003791 211 NGELLNHE 218 (795)
Q Consensus 211 tG~~~w~~ 218 (795)
+|+...+.
T Consensus 265 ~~~~~~~~ 272 (410)
T 1vyh_C 265 TKECKAEL 272 (410)
T ss_dssp TCCEEEEE
T ss_pred CCceeeEe
Confidence 88765443
No 77
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.58 E-value=0.035 Score=59.28 Aligned_cols=195 Identities=14% Similarity=0.037 Sum_probs=113.8
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcC------------Ccceeeeeeeee-CCEEEEEEccCCeEEEEeCCCCcE
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLG------------INDVVDGIDIAL-GKYVITLSSDGSTLRAWNLPDGQM 118 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~------------~~~~i~~l~~~~-g~~~V~Vs~~g~~v~A~d~~tG~l 118 (795)
+++.+++++.+|.|...|..+|+........ ....+..+.... ++..++.++.++.++.||..+|+.
T Consensus 55 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 134 (408)
T 4a11_B 55 EGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQT 134 (408)
T ss_dssp TCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCcc
Confidence 4677999999999999999999988877632 112233332222 333555455567999999999999
Q ss_pred eEEEeccCccccCCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEec
Q 003791 119 VWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYA 197 (795)
Q Consensus 119 lWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~ 197 (795)
........... .....+ .......+++. .+|.+..+|..+|+............ ..+.....+..+++.+..
T Consensus 135 ~~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v--~~~~~~~~~~~ll~~~~~ 207 (408)
T 4a11_B 135 ADVFNFEETVY--SHHMSP---VSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEI--LAVSWSPRYDYILATASA 207 (408)
T ss_dssp EEEEECSSCEE--EEEECS---SCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCE--EEEEECSSCTTEEEEEET
T ss_pred ceeccCCCcee--eeEeec---CCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcE--EEEEECCCCCcEEEEEcC
Confidence 99988655432 222222 10112234444 48999999999999888776443322 222212233434444443
Q ss_pred CCceeEEEEEEcCCCcee-eeeeee-------cc---CCccc---ceEEe-cCcEEEEEECCCCeEEEEEeecCe
Q 003791 198 GSSQFHAYQINAMNGELL-NHETAA-------FS---GGFVG---DVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 198 g~~~~~v~ald~~tG~~~-w~~~v~-------~~---~~~~~---~~~~v-g~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
.+ .+..+|..+++.. ...... .. ....+ .+.+- .++.+++.. ..+.+++-++.+++
T Consensus 208 dg---~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~ 278 (408)
T 4a11_B 208 DS---RVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVG-TDNRMRLWNSSNGE 278 (408)
T ss_dssp TS---CEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTCC
T ss_pred CC---cEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEec-CCCeEEEEECCCCc
Confidence 33 6888898887632 211000 00 01111 11121 334566555 45889999998876
No 78
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.57 E-value=0.0054 Score=64.14 Aligned_cols=154 Identities=10% Similarity=0.049 Sum_probs=103.5
Q ss_pred CCEEEEEEcc---CCeEEEEeCCCCcEeEEEeccCccccCCceeccccccccCCCeEEEEe--CCEEEEEECCCCcEEEE
Q 003791 95 GKYVITLSSD---GSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSS--KGCLHAVSSIDGEILWT 169 (795)
Q Consensus 95 g~~~V~Vs~~---g~~v~A~d~~tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~~--~g~l~ald~~tG~~~W~ 169 (795)
.++.+|+++. ++.|+.+|+.+|+++=+..+..... ...+ ..+ ++.+++.. ++.+..+|.++++++-+
T Consensus 30 ~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~f--geGi-----~~~-g~~lyv~t~~~~~v~viD~~t~~v~~~ 101 (266)
T 2iwa_A 30 ENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYF--GEGL-----TLL-NEKLYQVVWLKNIGFIYDRRTLSNIKN 101 (266)
T ss_dssp STTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCC--EEEE-----EEE-TTEEEEEETTCSEEEEEETTTTEEEEE
T ss_pred CCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcc--eEEE-----EEe-CCEEEEEEecCCEEEEEECCCCcEEEE
Confidence 3368888642 4799999999999999888755332 1111 223 46788874 89999999999999998
Q ss_pred EeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcCCCceeeeeeeecc-CCc--ccceEEecCcEEEEEECCCC
Q 003791 170 RDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHETAAFS-GGF--VGDVALVSSDTLVTLDTTRS 246 (795)
Q Consensus 170 ~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~tG~~~w~~~v~~~-~~~--~~~~~~vg~~~lv~~d~~~~ 246 (795)
.+.+.+. ...+ +.+++.+|+. . |+ -++..+|++|.+.+....+... ..+ .+...++ ++.+++.....+
T Consensus 102 i~~g~~~--g~gl--t~Dg~~l~vs-~-gs--~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~ 172 (266)
T 2iwa_A 102 FTHQMKD--GWGL--ATDGKILYGS-D-GT--SILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTD 172 (266)
T ss_dssp EECCSSS--CCEE--EECSSSEEEE-C-SS--SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSS
T ss_pred EECCCCC--eEEE--EECCCEEEEE-C-CC--CeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCC
Confidence 8765111 1123 3467788864 3 32 2899999999999988876542 111 1122233 345555555567
Q ss_pred eEEEEEeecCeeeeEEEeec
Q 003791 247 ILVTVSFKNRKIAFQETHLS 266 (795)
Q Consensus 247 ~L~v~~l~sg~~~~~~~~l~ 266 (795)
.+.++|..++++ ...+++.
T Consensus 173 ~V~vID~~tg~V-~~~I~~~ 191 (266)
T 2iwa_A 173 CIARISAKDGTL-LGWILLP 191 (266)
T ss_dssp EEEEEETTTCCE-EEEEECH
T ss_pred eEEEEECCCCcE-EEEEECC
Confidence 899999999984 5666664
No 79
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.56 E-value=0.12 Score=54.74 Aligned_cols=189 Identities=10% Similarity=-0.006 Sum_probs=110.5
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeE----EEeccCc
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVW----ESFLRGS 127 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llW----e~~~~~~ 127 (795)
+++.+++++.+|.|...|..+|+.+-....... .+..+.....+..++.++.++.++.||..++.... +......
T Consensus 66 d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~ 144 (340)
T 1got_B 66 DSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSS-WVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTG 144 (340)
T ss_dssp TSSEEEEEETTTEEEEEETTTCCEEEEEECSSS-CEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSS
T ss_pred CCCEEEEEeCCCcEEEEECCCCCcceEeecCCc-cEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCc
Confidence 466799999999999999999998877665443 23333222334455556667899999998875322 2222221
Q ss_pred cccCCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEE
Q 003791 128 KHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQ 206 (795)
Q Consensus 128 ~~s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~a 206 (795)
.. ..+ ....++.++.. .++.+...|..+|+..-++....... ..+.. ..++..++.+...+ .+..
T Consensus 145 ~v----~~~----~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v--~~~~~-~~~~~~l~sg~~d~---~v~~ 210 (340)
T 1got_B 145 YL----SCC----RFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDV--MSLSL-APDTRLFVSGACDA---SAKL 210 (340)
T ss_dssp CE----EEE----EEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCE--EEEEE-CTTSSEEEEEETTS---CEEE
T ss_pred cE----EEE----EECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCce--EEEEE-CCCCCEEEEEeCCC---cEEE
Confidence 11 111 11113455444 48999999999999887775433322 22221 22334444343322 6788
Q ss_pred EEcCCCceeeeeeeeccCCcccceEEecCcEEEEEECCCCeEEEEEeecCe
Q 003791 207 INAMNGELLNHETAAFSGGFVGDVALVSSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 207 ld~~tG~~~w~~~v~~~~~~~~~~~~vg~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
.|..+|+.+...... ...+..-++...++.+++.. ..+.+.+-|+.+++
T Consensus 211 wd~~~~~~~~~~~~h-~~~v~~v~~~p~~~~l~s~s-~d~~v~iwd~~~~~ 259 (340)
T 1got_B 211 WDVREGMCRQTFTGH-ESDINAICFFPNGNAFATGS-DDATCRLFDLRADQ 259 (340)
T ss_dssp EETTTCSEEEEECCC-SSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTTE
T ss_pred EECCCCeeEEEEcCC-cCCEEEEEEcCCCCEEEEEc-CCCcEEEEECCCCc
Confidence 899999877655311 11121111111445666655 45889999998876
No 80
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.56 E-value=0.19 Score=56.97 Aligned_cols=115 Identities=15% Similarity=0.122 Sum_probs=76.9
Q ss_pred CCEEEEEeCCCEEEEEECcCCccceEEEc---CCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccc
Q 003791 53 RKRVVVSTEENVIASLDLRHGEIFWRHVL---GINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKH 129 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~ivWR~~l---~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~ 129 (795)
++.+++++.+|.|...|.++|+.+.+... .....+..+... .+..++.++.++.++.||..+|+.+..........
T Consensus 219 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~ 297 (615)
T 1pgu_A 219 GEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQL 297 (615)
T ss_dssp CCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCG
T ss_pred CCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcc
Confidence 56788999999999999999998877622 223335544334 44555556666799999999999999988763211
Q ss_pred cCCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEec
Q 003791 130 SKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDF 172 (795)
Q Consensus 130 s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~ 172 (795)
......+ ....++.+++. .+|.+..+|..+|+.......
T Consensus 298 ~~~~~~~----~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~ 337 (615)
T 1pgu_A 298 GNQQVGV----VATGNGRIISLSLDGTLNFYELGHDEVLKTISG 337 (615)
T ss_dssp GGCEEEE----EEEETTEEEEEETTSCEEEEETTEEEEEEEECC
T ss_pred cCceeEE----EeCCCCeEEEEECCCCEEEEECCCCcEEEEEeC
Confidence 0111111 11124555555 488999999988888777654
No 81
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.55 E-value=0.12 Score=56.04 Aligned_cols=191 Identities=9% Similarity=0.097 Sum_probs=103.3
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcCCcc-----------------eeeeeeeeeCCEEEEEEccCCeEEEEeCC
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGIND-----------------VVDGIDIALGKYVITLSSDGSTLRAWNLP 114 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~-----------------~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~ 114 (795)
++..+.+++ ++.+.-.|..+|+.+.+....... .+..+....++..++.++.++.|+.||..
T Consensus 75 dg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~ 153 (393)
T 1erj_A 75 DGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIE 153 (393)
T ss_dssp TSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 344455554 567888899999988775432110 12222222233445546667899999999
Q ss_pred CCcEeEEEeccCccccCCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEE
Q 003791 115 DGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYV 193 (795)
Q Consensus 115 tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyv 193 (795)
+|+.+-......... ..+.+.+ + ++.++.. .++.+...|..+|+........... ..+.....++..++
T Consensus 154 ~~~~~~~~~~h~~~v-~~~~~~p-----~-~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v---~~~~~~~~~~~~l~ 223 (393)
T 1erj_A 154 NRKIVMILQGHEQDI-YSLDYFP-----S-GDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGV---TTVAVSPGDGKYIA 223 (393)
T ss_dssp TTEEEEEECCCSSCE-EEEEECT-----T-SSEEEEEETTSEEEEEETTTTEEEEEEECSSCE---EEEEECSTTCCEEE
T ss_pred CCcEEEEEccCCCCE-EEEEEcC-----C-CCEEEEecCCCcEEEEECCCCeeEEEEEcCCCc---EEEEEECCCCCEEE
Confidence 999887766544322 1122222 2 2334444 4899999999999988877654332 12221222444444
Q ss_pred EEecCCceeEEEEEEcCCCceeeeeeeecc--CCccc---ceEEe-cCcEEEEEECCCCeEEEEEeecCe
Q 003791 194 VGYAGSSQFHAYQINAMNGELLNHETAAFS--GGFVG---DVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 194 v~~~g~~~~~v~ald~~tG~~~w~~~v~~~--~~~~~---~~~~v-g~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
.+...+ .+..+|..+|+.+........ .+-.+ .+.+- ++..++... ..+.+.+-|+.++.
T Consensus 224 ~~s~d~---~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s-~d~~v~~wd~~~~~ 289 (393)
T 1erj_A 224 AGSLDR---AVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGS-LDRSVKLWNLQNAN 289 (393)
T ss_dssp EEETTS---CEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEE-TTSEEEEEEC----
T ss_pred EEcCCC---cEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEe-CCCEEEEEECCCCC
Confidence 443332 678889999988765422111 11111 12221 334555554 35778888877644
No 82
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.51 E-value=0.04 Score=58.49 Aligned_cols=189 Identities=13% Similarity=0.031 Sum_probs=109.7
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEE--cCC-cceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCcc
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHV--LGI-NDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSK 128 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~--l~~-~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~ 128 (795)
+++.+++++.++.+.-.|.++++...+.. +.. .+.+..+....++. ++.++.++.++.||..+|+.+-........
T Consensus 108 ~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~ 186 (340)
T 1got_B 108 SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGD 186 (340)
T ss_dssp TSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSC
T ss_pred CCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCc
Confidence 46678889999999999998876444332 221 12233332233444 443555679999999999998777654432
Q ss_pred ccCCceeccccccccCCCeEEE-E-eCCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEE
Q 003791 129 HSKPLLLVPTNLKVDKDSLILV-S-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQ 206 (795)
Q Consensus 129 ~s~~~~~~~~~~~~~~~~~V~V-~-~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~a 206 (795)
. ..+.+. .++..++ . .++.+...|..+|+..-++....... ..+..+..+..+...+.+| .+..
T Consensus 187 v-~~~~~~-------~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v--~~v~~~p~~~~l~s~s~d~----~v~i 252 (340)
T 1got_B 187 V-MSLSLA-------PDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDI--NAICFFPNGNAFATGSDDA----TCRL 252 (340)
T ss_dssp E-EEEEEC-------TTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCE--EEEEECTTSSEEEEEETTS----CEEE
T ss_pred e-EEEEEC-------CCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCE--EEEEEcCCCCEEEEEcCCC----cEEE
Confidence 2 111121 1344444 3 38999999999999887775443322 2222222344444444444 6788
Q ss_pred EEcCCCceeeeeeeec-cCCcccceEEe-cCcEEEEEECCCCeEEEEEeecCe
Q 003791 207 INAMNGELLNHETAAF-SGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 207 ld~~tG~~~w~~~v~~-~~~~~~~~~~v-g~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
+|..+++.+....... ...+. .+.+- .+.++++.. ..+.+++-|+.++.
T Consensus 253 wd~~~~~~~~~~~~~~~~~~v~-~~~~s~~g~~l~~g~-~d~~i~vwd~~~~~ 303 (340)
T 1got_B 253 FDLRADQELMTYSHDNIICGIT-SVSFSKSGRLLLAGY-DDFNCNVWDALKAD 303 (340)
T ss_dssp EETTTTEEEEEECCTTCCSCEE-EEEECTTSSEEEEEE-TTSEEEEEETTTCC
T ss_pred EECCCCcEEEEEccCCcccceE-EEEECCCCCEEEEEC-CCCeEEEEEcccCc
Confidence 8999998776553111 01111 11221 344555555 45788888887765
No 83
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.47 E-value=0.031 Score=61.45 Aligned_cols=185 Identities=8% Similarity=0.083 Sum_probs=117.4
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccC
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~ 131 (795)
+++.+++++.+|.|...|.++|+.+.+..... ..+..+ ...++.++.++.++.++.||..++............. .
T Consensus 182 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~-~~v~~l--~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~-~ 257 (435)
T 1p22_A 182 DERVIITGSSDSTVRVWDVNTGEMLNTLIHHC-EAVLHL--RFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHR-A 257 (435)
T ss_dssp CSSEEEEEETTSCEEEEESSSCCEEEEECCCC-SCEEEE--ECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCS-S
T ss_pred CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCC-CcEEEE--EEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCC-C
Confidence 46789999999999999999999887765322 234444 2334455556667899999999998764322211111 1
Q ss_pred CceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcC
Q 003791 132 PLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAM 210 (795)
Q Consensus 132 ~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~ 210 (795)
....+ ..+ ++.+++. .+|.+...|..+|+...+........ ..+ ...++.++..+.+| .+..+|..
T Consensus 258 ~v~~~----~~~-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v--~~~--~~~~~~l~~g~~dg----~i~iwd~~ 324 (435)
T 1p22_A 258 AVNVV----DFD-DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI--ACL--QYRDRLVVSGSSDN----TIRLWDIE 324 (435)
T ss_dssp CEEEE----EEE-TTEEEEEETTSEEEEEETTTCCEEEEEECCSSCE--EEE--EEETTEEEEEETTS----CEEEEETT
T ss_pred cEEEE----EeC-CCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcE--EEE--EeCCCEEEEEeCCC----eEEEEECC
Confidence 11111 222 4555555 48999999999999998887544332 122 23556666655555 68889999
Q ss_pred CCceeeeeeeeccCCcccceEEecCcEEEEEECCCCeEEEEEeecCe
Q 003791 211 NGELLNHETAAFSGGFVGDVALVSSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 211 tG~~~w~~~v~~~~~~~~~~~~vg~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
+|+.+...... ...+ .++-..++.+++.. ..|.+.+-|+.++.
T Consensus 325 ~~~~~~~~~~h-~~~v--~~~~~~~~~l~sg~-~dg~i~vwd~~~~~ 367 (435)
T 1p22_A 325 CGACLRVLEGH-EELV--RCIRFDNKRIVSGA-YDGKIKVWDLVAAL 367 (435)
T ss_dssp TCCEEEEECCC-SSCE--EEEECCSSEEEEEE-TTSCEEEEEHHHHT
T ss_pred CCCEEEEEeCC-cCcE--EEEEecCCEEEEEe-CCCcEEEEECCCCC
Confidence 99988766311 1111 12223556666666 45889999987754
No 84
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.44 E-value=0.036 Score=59.30 Aligned_cols=197 Identities=11% Similarity=0.018 Sum_probs=113.9
Q ss_pred CEEEEEeCCCEEEEEECcCCcc-----ceEEEcCC----cceeeeeeee----eCCEE-EEEEccCCeEEEEeCCC----
Q 003791 54 KRVVVSTEENVIASLDLRHGEI-----FWRHVLGI----NDVVDGIDIA----LGKYV-ITLSSDGSTLRAWNLPD---- 115 (795)
Q Consensus 54 ~~v~vat~~g~l~ALn~~tG~i-----vWR~~l~~----~~~i~~l~~~----~g~~~-V~Vs~~g~~v~A~d~~t---- 115 (795)
..+++++.+|.|...|.++|+. ........ ...+..+... ..+.. ++.++.++.|+.||..+
T Consensus 82 ~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 161 (397)
T 1sq9_A 82 CLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADE 161 (397)
T ss_dssp EEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSH
T ss_pred cEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccc
Confidence 5688899999999999999986 33333221 2334444333 33444 55566667999999999
Q ss_pred --CcEeE-----EEec-------cCccccCCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEec---c---C
Q 003791 116 --GQMVW-----ESFL-------RGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDF---A---A 174 (795)
Q Consensus 116 --G~llW-----e~~~-------~~~~~s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~---~---~ 174 (795)
++.+. +... ..... ..+. ...++.+++. .+|.+..+|..+++..+++.. . .
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~-------~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~ 233 (397)
T 1sq9_A 162 SNSLTLNWSPTLELQGTVESPMTPSQFA-TSVD-------ISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNS 233 (397)
T ss_dssp HHHTTTCCCCEEEEEEEECCSSSSCCCC-CEEE-------ECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCC
T ss_pred cccceeeccCcceeeeeeccccCCCCCc-eEEE-------ECCCceEEEEeCCCcEEEEECCCCceeEEEeccccccccC
Confidence 77665 4432 11111 1111 2223433333 389999999999999999876 2 2
Q ss_pred cceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcCCCceeeeeeee------------ccCCcccceEEe-cCcEEEEE
Q 003791 175 ESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHETAA------------FSGGFVGDVALV-SSDTLVTL 241 (795)
Q Consensus 175 ~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~tG~~~w~~~v~------------~~~~~~~~~~~v-g~~~lv~~ 241 (795)
.. ...+..+..+..+++.+.++ ....+..+|..+|+.+...... ....+. .+.+. .+.++++.
T Consensus 234 ~~--i~~i~~~~~~~~l~~~~~d~-~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~ 309 (397)
T 1sq9_A 234 NS--IRSVKFSPQGSLLAIAHDSN-SFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVM-SLSFNDSGETLCSA 309 (397)
T ss_dssp CC--EEEEEECSSTTEEEEEEEET-TEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEE-EEEECSSSSEEEEE
T ss_pred Cc--cceEEECCCCCEEEEEecCC-CCceEEEEECCCCcccceeccCcccccccccccccCCcEE-EEEECCCCCEEEEE
Confidence 22 22232223445555544441 0027899999999988766421 111111 12221 34566666
Q ss_pred ECCCCeEEEEEeecCeeeeEEEe
Q 003791 242 DTTRSILVTVSFKNRKIAFQETH 264 (795)
Q Consensus 242 d~~~~~L~v~~l~sg~~~~~~~~ 264 (795)
. ..+.+++.++.+++ .+..+.
T Consensus 310 ~-~dg~i~iwd~~~~~-~~~~~~ 330 (397)
T 1sq9_A 310 G-WDGKLRFWDVKTKE-RITTLN 330 (397)
T ss_dssp E-TTSEEEEEETTTTE-EEEEEE
T ss_pred e-CCCeEEEEEcCCCc-eeEEEe
Confidence 5 46899999999887 244444
No 85
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.42 E-value=0.14 Score=55.88 Aligned_cols=147 Identities=11% Similarity=-0.028 Sum_probs=89.6
Q ss_pred ccCCCEEEEEe----------CCCEEEEEECcCCccceEEEcCC-c-----ceeeeeeeeeCCEEEEEEc-c-CCeEEEE
Q 003791 50 KTGRKRVVVST----------EENVIASLDLRHGEIFWRHVLGI-N-----DVVDGIDIALGKYVITLSS-D-GSTLRAW 111 (795)
Q Consensus 50 ~~~~~~v~vat----------~~g~l~ALn~~tG~ivWR~~l~~-~-----~~i~~l~~~~g~~~V~Vs~-~-g~~v~A~ 111 (795)
+++++.+|++. .++.|..+|+++++++-+..++. . .....+.+.-++..+++++ . ++.|..+
T Consensus 74 spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~vi 153 (373)
T 2mad_H 74 AHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLV 153 (373)
T ss_pred CCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEE
Confidence 34577899997 36889999999999998887751 1 0111232333555666654 2 4689999
Q ss_pred eCCCCcEeEE-EeccCccccCCceeccccccccCCCeEEEE--eCCEEEEEECCCCcEEEEEec----cCcceeeeeEEE
Q 003791 112 NLPDGQMVWE-SFLRGSKHSKPLLLVPTNLKVDKDSLILVS--SKGCLHAVSSIDGEILWTRDF----AAESVEVQQVIQ 184 (795)
Q Consensus 112 d~~tG~llWe-~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~--~~g~l~ald~~tG~~~W~~~~----~~~~~~~~~vv~ 184 (795)
| .+|+++-+ ..+.... .+.+ + .+..++. .+|++..+|. +|+..+.... ..+.-.......
T Consensus 154 D-~t~~~~~~~i~~~~~~-----~~~~-----~-~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~ 220 (373)
T 2mad_H 154 V-QGGSSDDQLLSSPTCY-----HIHP-----G-APSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQ 220 (373)
T ss_pred E-CCCCEEeEEcCCCceE-----EEEe-----C-CCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeeccee
Confidence 9 99999866 5543321 1222 2 2333443 4899999999 9999876432 111000001111
Q ss_pred EecCCEEEEEEecCCceeEEEEEEcCCCc
Q 003791 185 LDESDQIYVVGYAGSSQFHAYQINAMNGE 213 (795)
Q Consensus 185 s~~~~~Vyvv~~~g~~~~~v~ald~~tG~ 213 (795)
...++.+|+++..+ .++.+|..++.
T Consensus 221 ~~~~~~~~~~~~~~----~v~vid~~~~~ 245 (373)
T 2mad_H 221 ANKSGRIVWPVYSG----KILQADISAAG 245 (373)
T ss_pred EecCCEEEEEcCCc----eEEEEeccCCc
Confidence 23456666666544 78889987764
No 86
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.42 E-value=0.0036 Score=67.59 Aligned_cols=193 Identities=13% Similarity=0.165 Sum_probs=104.6
Q ss_pred CCEEEEEeCCCEEEEEECcCCccceEEEcC---CcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccc
Q 003791 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLG---INDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKH 129 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~ivWR~~l~---~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~ 129 (795)
++++++++.+|.|.-.|..+|+..-...+. ....+..+.....+..++.++.++.|+.||..+|+.+..........
T Consensus 105 d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v 184 (357)
T 4g56_B 105 EKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEV 184 (357)
T ss_dssp TTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred CCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCE
Confidence 567889999999998899888765433221 12234444223333444445566799999999999999887654432
Q ss_pred cCCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEE
Q 003791 130 SKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQIN 208 (795)
Q Consensus 130 s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald 208 (795)
..+.+. .+.+..++.. .+|.+...|..+|+..-..........+..+..+..++.+++.+...+ .+..+|
T Consensus 185 -~~v~~s-----~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~---~i~~wd 255 (357)
T 4g56_B 185 -NCVAAC-----PGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETG---NVSLVN 255 (357)
T ss_dssp -EEEEEC-----TTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSS---CEEEEE
T ss_pred -EEEEEc-----cCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeeccc---ceeEEE
Confidence 111111 1212233334 488899999988876544433222221223322223455555544332 678889
Q ss_pred cCCCceeeeeeeeccCCcccceEEe--cCcEEEEEECCCCeEEEEEeecCe
Q 003791 209 AMNGELLNHETAAFSGGFVGDVALV--SSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 209 ~~tG~~~w~~~v~~~~~~~~~~~~v--g~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
..+|+.+....... ..+. .+.+- +..+++... ..+.+++-|+.+++
T Consensus 256 ~~~~~~~~~~~~~~-~~v~-~l~~sp~~~~~lasgs-~D~~i~iwd~~~~~ 303 (357)
T 4g56_B 256 IKNPDSAQTSAVHS-QNIT-GLAYSYHSSPFLASIS-EDCTVAVLDADFSE 303 (357)
T ss_dssp SSCGGGCEEECCCS-SCEE-EEEECSSSSCCEEEEE-TTSCEEEECTTSCE
T ss_pred CCCCcEeEEEeccc-eeEE-EEEEcCCCCCEEEEEe-CCCEEEEEECCCCc
Confidence 99998876553211 1121 12221 234555554 45788888888876
No 87
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.41 E-value=0.067 Score=55.92 Aligned_cols=196 Identities=12% Similarity=0.166 Sum_probs=109.5
Q ss_pred CCEEE-EEeC---CCEEEEEECcCCccceEEEcCCcceeeeeeeeeC---CEEEEEEccCCeEEEEeCCCCc-EeEEEec
Q 003791 53 RKRVV-VSTE---ENVIASLDLRHGEIFWRHVLGINDVVDGIDIALG---KYVITLSSDGSTLRAWNLPDGQ-MVWESFL 124 (795)
Q Consensus 53 ~~~v~-vat~---~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g---~~~V~Vs~~g~~v~A~d~~tG~-llWe~~~ 124 (795)
++.++ +++. +|.|.-.|..+|+.......+....+..+..... +..++.++.++.++.||..+|+ .+.....
T Consensus 30 ~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 109 (357)
T 3i2n_A 30 SAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKG 109 (357)
T ss_dssp SSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECC
T ss_pred CceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEe
Confidence 44554 4444 8999999999999876665544444444422222 3555556666799999999998 7777765
Q ss_pred cCccccCCceeccccccccCCC-eEEEE-eCCEEEEEECCCCc-EEEEEeccCcc--eeeeeEEE---EecCCEEEEEEe
Q 003791 125 RGSKHSKPLLLVPTNLKVDKDS-LILVS-SKGCLHAVSSIDGE-ILWTRDFAAES--VEVQQVIQ---LDESDQIYVVGY 196 (795)
Q Consensus 125 ~~~~~s~~~~~~~~~~~~~~~~-~V~V~-~~g~l~ald~~tG~-~~W~~~~~~~~--~~~~~vv~---s~~~~~Vyvv~~ 196 (795)
..... ..+...+ ......++ .++.. .+|.+...|..+++ +...+...... .....+.. -..++..++.+.
T Consensus 110 ~~~~v-~~~~~~~-~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 187 (357)
T 3i2n_A 110 HKEII-NAIDGIG-GLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGY 187 (357)
T ss_dssp CSSCE-EEEEEES-GGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEE
T ss_pred cccce-EEEeecc-ccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEc
Confidence 44332 1111110 00011133 44444 38999999999987 66666443221 11111210 012334444444
Q ss_pred cCCceeEEEEEEcCCCceeeeeeeeccCCcccceEEe----cCcEEEEEECCCCeEEEEEeecCe
Q 003791 197 AGSSQFHAYQINAMNGELLNHETAAFSGGFVGDVALV----SSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 197 ~g~~~~~v~ald~~tG~~~w~~~v~~~~~~~~~~~~v----g~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
..+ .+..+|..+++..+... ....+.. +.+. .++.+++.. ..+.+.+.++.+++
T Consensus 188 ~d~---~i~i~d~~~~~~~~~~~--~~~~v~~-~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~ 245 (357)
T 3i2n_A 188 DNG---DIKLFDLRNMALRWETN--IKNGVCS-LEFDRKDISMNKLVATS-LEGKFHVFDMRTQH 245 (357)
T ss_dssp TTS---EEEEEETTTTEEEEEEE--CSSCEEE-EEESCSSSSCCEEEEEE-STTEEEEEEEEEEE
T ss_pred cCC---eEEEEECccCceeeecC--CCCceEE-EEcCCCCCCCCEEEEEC-CCCeEEEEeCcCCC
Confidence 433 78999999999865542 2222221 2221 234555554 46889999998765
No 88
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.39 E-value=0.032 Score=61.43 Aligned_cols=151 Identities=10% Similarity=-0.009 Sum_probs=92.2
Q ss_pred ccCCCEEEEEe----------CCCEEEEEECcCCccceEEEcCCcc------eeeeeeeeeCCEEEEEEcc--CCeEEEE
Q 003791 50 KTGRKRVVVST----------EENVIASLDLRHGEIFWRHVLGIND------VVDGIDIALGKYVITLSSD--GSTLRAW 111 (795)
Q Consensus 50 ~~~~~~v~vat----------~~g~l~ALn~~tG~ivWR~~l~~~~------~i~~l~~~~g~~~V~Vs~~--g~~v~A~ 111 (795)
+++++.+|+++ ..+.|..+|++|++++-+..++.+. ...++.+..++..+||+.. ++.|..+
T Consensus 86 spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVI 165 (386)
T 3sjl_D 86 ADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVV 165 (386)
T ss_dssp CTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEE
T ss_pred CCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEE
Confidence 45677799987 3688999999999999998876410 1123323445567777752 5789999
Q ss_pred eCCCCcEeEEEeccCccccCCceeccccccccCCCeEEEE-eCCEEEEEECCC-CcEEEEEecc-Ccceeeee--EEEEe
Q 003791 112 NLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSID-GEILWTRDFA-AESVEVQQ--VIQLD 186 (795)
Q Consensus 112 d~~tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~t-G~~~W~~~~~-~~~~~~~~--vv~s~ 186 (795)
|..+++++-+..+.+.. .+.+ .+.+..+.. .+|++.-++..+ |++.=+.... .....+.. .....
T Consensus 166 D~~t~~vv~tI~v~g~~-----~~~P-----~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~ 235 (386)
T 3sjl_D 166 DLEGKAFKRMLDVPDCY-----HIFP-----TAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQ 235 (386)
T ss_dssp ETTTTEEEEEEECCSEE-----EEEE-----EETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEET
T ss_pred ECCCCcEEEEEECCCcc-----eeec-----CCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEc
Confidence 99999999888765421 1222 112333343 488888888876 7763111100 01000110 11112
Q ss_pred cCCEEEEEEecCCceeEEEEEEcCCCce
Q 003791 187 ESDQIYVVGYAGSSQFHAYQINAMNGEL 214 (795)
Q Consensus 187 ~~~~Vyvv~~~g~~~~~v~ald~~tG~~ 214 (795)
.++.+++++..| +++.+|..++.+
T Consensus 236 ~dG~~~~vs~~g----~V~v~d~~~~~~ 259 (386)
T 3sjl_D 236 KAGRLVWPTYTG----KIHQIDLSSGDA 259 (386)
T ss_dssp TTTEEEEEBTTS----EEEEEECTTSSC
T ss_pred CCCcEEEEeCCC----EEEEEECCCCcc
Confidence 466665567655 799999987764
No 89
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.38 E-value=0.24 Score=53.94 Aligned_cols=185 Identities=10% Similarity=-0.046 Sum_probs=108.8
Q ss_pred cCCCEEEEEeC--CC---EEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEc----------cCCeEEEEeCCC
Q 003791 51 TGRKRVVVSTE--EN---VIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSS----------DGSTLRAWNLPD 115 (795)
Q Consensus 51 ~~~~~v~vat~--~g---~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~----------~g~~v~A~d~~t 115 (795)
++.+++|++.. .+ .|..+|+.+|+++=+...+.. . ++.+.-++..+|++. .++.|..||+.+
T Consensus 30 ~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~--p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t 106 (373)
T 2mad_H 30 ADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFL--P-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT 106 (373)
T ss_pred CCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCC--C-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC
Confidence 44677999985 33 889999999999855444322 2 443344566777764 246799999999
Q ss_pred CcEeEEEeccCc-c-----ccCCceeccccccccCCCeEEEEe---CCEEEEEECCCCcEEEE-EeccCcceeeeeEEEE
Q 003791 116 GQMVWESFLRGS-K-----HSKPLLLVPTNLKVDKDSLILVSS---KGCLHAVSSIDGEILWT-RDFAAESVEVQQVIQL 185 (795)
Q Consensus 116 G~llWe~~~~~~-~-----~s~~~~~~~~~~~~~~~~~V~V~~---~g~l~ald~~tG~~~W~-~~~~~~~~~~~~vv~s 185 (795)
++++-+..+.++ . ....+.+ ..+ ++.+++.. ++.|..+| ++|+++-+ ...+... .+ .
T Consensus 107 ~~~~~~i~~~~~~~~~~g~~p~~~~~-----spD-G~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~~----~~--~ 173 (373)
T 2mad_H 107 FLPIADIELPDAPRFDVGPYSWMNAN-----TPN-NADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTCY----HI--H 173 (373)
T ss_pred CcEEEEEECCCccccccCCCccceEE-----CCC-CCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCceE----EE--E
Confidence 999988876511 0 0011111 223 46677763 47899999 99999877 6554321 11 1
Q ss_pred ecCCEEEEEEecCCceeEEEEEEcCCCceeeeeeeeccCCcccce-----EEe-cCcEEEEEECCCCeEEEEEeecCe
Q 003791 186 DESDQIYVVGYAGSSQFHAYQINAMNGELLNHETAAFSGGFVGDV-----ALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 186 ~~~~~Vyvv~~~g~~~~~v~ald~~tG~~~w~~~v~~~~~~~~~~-----~~v-g~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
..+...|+.....+ ++..+|. +|+..+........ ....+ .+. .++.+++.. ..+.++++|+.++.
T Consensus 174 ~~~~~~~~~~~~dg---~~~~vd~-~g~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~-~~~~v~vid~~~~~ 245 (373)
T 2mad_H 174 PGAPSTFYLLCAQG---GLAKTDH-AGGAAGAGLVGAML-TAAQNLLTQPAQANKSGRIVWPV-YSGKILQADISAAG 245 (373)
T ss_pred eCCCceEEEEcCCC---CEEEEEC-CCcEEEEEeccccc-cCCcceeecceeEecCCEEEEEc-CCceEEEEeccCCc
Confidence 23444554322222 6888999 99988654311100 11111 111 223333333 45789999997654
No 90
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.38 E-value=0.043 Score=61.26 Aligned_cols=231 Identities=10% Similarity=-0.016 Sum_probs=128.3
Q ss_pred eeeccccceeEEEeccCceeeeeeeeeccCCCEEEEEe----------CCCEEEEEECcCCccceEEEcCCc------ce
Q 003791 23 LYEDQVGLMDWHQQYIGKVKHAVFHTQKTGRKRVVVST----------EENVIASLDLRHGEIFWRHVLGIN------DV 86 (795)
Q Consensus 23 l~edq~G~~dW~~~~vG~~~~~~f~~~~~~~~~v~vat----------~~g~l~ALn~~tG~ivWR~~l~~~------~~ 86 (795)
++.-+.+++.++.+.-..| ... .+++++++||+. ..+.|..+|++|++++-+..++.. ..
T Consensus 103 VID~~t~~vv~~I~vG~~P-gia---~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~ 178 (426)
T 3c75_H 103 VIDGSTGRILGMTDGGFLP-HPV---AAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTY 178 (426)
T ss_dssp EEETTTTEEEEEEEECSSC-EEE---ECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCC
T ss_pred EEECCCCEEEEEEECCCCC-ceE---ECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCC
Confidence 3444456666666542223 222 234577899997 468899999999999999888511 11
Q ss_pred eeeeeeeeCCEEEEEEcc--CCeEEEEeCCCCcEeEEEeccCccc------------c--CCceeccc------------
Q 003791 87 VDGIDIALGKYVITLSSD--GSTLRAWNLPDGQMVWESFLRGSKH------------S--KPLLLVPT------------ 138 (795)
Q Consensus 87 i~~l~~~~g~~~V~Vs~~--g~~v~A~d~~tG~llWe~~~~~~~~------------s--~~~~~~~~------------ 138 (795)
..++.+..++..+||+.. ++.|..+|..+++++-+..+.+... + .....+..
T Consensus 179 P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~ 258 (426)
T 3c75_H 179 QWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEV 258 (426)
T ss_dssp GGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCC
T ss_pred cceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeee
Confidence 123333445667787652 5789999999999999888743100 0 00000000
Q ss_pred ----------cc--cccCCCeEEEE-eCCEEEEEECCCCcEE----EEEeccCc---ceeeee---EEEEecCCEEEEEE
Q 003791 139 ----------NL--KVDKDSLILVS-SKGCLHAVSSIDGEIL----WTRDFAAE---SVEVQQ---VIQLDESDQIYVVG 195 (795)
Q Consensus 139 ----------~~--~~~~~~~V~V~-~~g~l~ald~~tG~~~----W~~~~~~~---~~~~~~---vv~s~~~~~Vyvv~ 195 (795)
.. ..+ .+.+++. ..+.|+.+|..++.+. |+...... ...+.. +.....++.+|+..
T Consensus 259 ~~v~~~p~~~~~~~~~d-g~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~ 337 (426)
T 3c75_H 259 FHTEDELLINHPAFSLR-SGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLV 337 (426)
T ss_dssp CSCTTSCBCSCCEECTT-TCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEE
T ss_pred eccCCCceeeEeeecCC-CCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEe
Confidence 00 000 1112222 2455555555444321 32110000 001111 22234567888865
Q ss_pred ecCC------ceeEEEEEEcCCCceeeeeeeec-cCCcccceEEe-cCc-EEEEEECCCCeEEEEEeecCeeeeEEE
Q 003791 196 YAGS------SQFHAYQINAMNGELLNHETAAF-SGGFVGDVALV-SSD-TLVTLDTTRSILVTVSFKNRKIAFQET 263 (795)
Q Consensus 196 ~~g~------~~~~v~ald~~tG~~~w~~~v~~-~~~~~~~~~~v-g~~-~lv~~d~~~~~L~v~~l~sg~~~~~~~ 263 (795)
..+. ..-.|..+|++|++.+....+.. |.++ .+- +++ .++......+.+.++|+.+++. ++.+
T Consensus 338 ~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gi----a~spDg~~~lyv~n~~s~~VsVID~~t~kv-v~tI 409 (426)
T 3c75_H 338 DQRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSI----NVSQDAEPLLYALSAGTQTLHIYDAATGEE-LRSV 409 (426)
T ss_dssp EECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEE----EECCSSSCEEEEEETTTTEEEEEETTTCCE-EEEE
T ss_pred cccccccccCCCCEEEEEECCCCeEEEEEECCCCcCeE----EEccCCCEEEEEEcCCCCeEEEEECCCCCE-EEEe
Confidence 3211 12379999999999998886654 3322 222 344 6777776678999999999883 4443
No 91
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.37 E-value=0.079 Score=66.46 Aligned_cols=155 Identities=12% Similarity=0.090 Sum_probs=91.1
Q ss_pred CCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccCCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEecc
Q 003791 95 GKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFA 173 (795)
Q Consensus 95 g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~ 173 (795)
++..++.++.++.|+.||..+|+.+.+........ ....+.+ + ++.++.. .+|.+...|..+|+.+.++...
T Consensus 626 ~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v-~~~~~s~-----~-~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~ 698 (1249)
T 3sfz_A 626 DGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEV-LCCAFSS-----D-DSYIATCSADKKVKIWDSATGKLVHTYDEH 698 (1249)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCE-EEEEECT-----T-SSEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred CCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCE-EEEEEec-----C-CCEEEEEeCCCeEEEEECCCCceEEEEcCC
Confidence 34455545666799999999999998887554432 1112221 2 2344444 4899999999999999888765
Q ss_pred CcceeeeeEEEEec-CCEEEEEEecCCceeEEEEEEcCCCceeeeeeeeccCCcccceEEe-cCcEEEEEECCCCeEEEE
Q 003791 174 AESVEVQQVIQLDE-SDQIYVVGYAGSSQFHAYQINAMNGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTV 251 (795)
Q Consensus 174 ~~~~~~~~vv~s~~-~~~Vyvv~~~g~~~~~v~ald~~tG~~~w~~~v~~~~~~~~~~~~v-g~~~lv~~d~~~~~L~v~ 251 (795)
.... ..+..+.. ++.+++.+...+ .+...|..+|+.+..... ....+.. +.+. .++.+++.. ..|.+.+-
T Consensus 699 ~~~v--~~~~~~~~~~~~~l~sg~~d~---~v~vwd~~~~~~~~~~~~-h~~~v~~-~~~sp~~~~l~s~s-~dg~v~vw 770 (1249)
T 3sfz_A 699 SEQV--NCCHFTNKSNHLLLATGSNDF---FLKLWDLNQKECRNTMFG-HTNSVNH-CRFSPDDELLASCS-ADGTLRLW 770 (1249)
T ss_dssp SSCE--EEEEECSSSSCCEEEEEETTS---CEEEEETTSSSEEEEECC-CSSCEEE-EEECSSTTEEEEEE-SSSEEEEE
T ss_pred CCcE--EEEEEecCCCceEEEEEeCCC---eEEEEECCCcchhheecC-CCCCEEE-EEEecCCCEEEEEE-CCCeEEEE
Confidence 4332 12211222 233443333322 688889999988765531 1112211 1221 445666665 45889999
Q ss_pred EeecCeeeeEEEee
Q 003791 252 SFKNRKIAFQETHL 265 (795)
Q Consensus 252 ~l~sg~~~~~~~~l 265 (795)
++.++. ....+..
T Consensus 771 d~~~~~-~~~~~~~ 783 (1249)
T 3sfz_A 771 DVRSAN-ERKSINV 783 (1249)
T ss_dssp EGGGTE-EEEEEEC
T ss_pred eCCCCc-ccceecc
Confidence 998877 2444443
No 92
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.36 E-value=0.024 Score=58.30 Aligned_cols=156 Identities=9% Similarity=0.022 Sum_probs=105.0
Q ss_pred CCEEEEEEccC---CeEEEEeCCCCcEeEEEeccCccccCCceeccccccccCCCeEEEEe--CCEEEEEECCCCcEEEE
Q 003791 95 GKYVITLSSDG---STLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSS--KGCLHAVSSIDGEILWT 169 (795)
Q Consensus 95 g~~~V~Vs~~g---~~v~A~d~~tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~~--~g~l~ald~~tG~~~W~ 169 (795)
.++.+|+|+.. +.|+.+|+++|+++=+..+..... +..+ ... ++.++++. ++.++.+|.+|++++=+
T Consensus 29 ~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~f--geGi-----~~~-~~~ly~ltw~~~~v~v~D~~tl~~~~t 100 (243)
T 3mbr_X 29 LRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYF--GAGI-----VAW-RDRLIQLTWRNHEGFVYDLATLTPRAR 100 (243)
T ss_dssp ETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCC--EEEE-----EEE-TTEEEEEESSSSEEEEEETTTTEEEEE
T ss_pred ECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcc--eeEE-----EEe-CCEEEEEEeeCCEEEEEECCcCcEEEE
Confidence 34678876532 589999999999998887765443 1111 223 57788874 89999999999999999
Q ss_pred EeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcCCCceeeeeeeecc-CCcc--cceEEecCcEEEEEECCCC
Q 003791 170 RDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHETAAFS-GGFV--GDVALVSSDTLVTLDTTRS 246 (795)
Q Consensus 170 ~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~tG~~~w~~~v~~~-~~~~--~~~~~vg~~~lv~~d~~~~ 246 (795)
++.+.... .+ ...++.+|+. +|+. +++.+|++|.+.+....+... ..+. +..-.+++ .+++..-.+.
T Consensus 101 i~~~~~Gw---gl--t~dg~~L~vS--dgs~--~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G-~lyanvw~s~ 170 (243)
T 3mbr_X 101 FRYPGEGW---AL--TSDDSHLYMS--DGTA--VIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNG-ELLANVWLTS 170 (243)
T ss_dssp EECSSCCC---EE--EECSSCEEEE--CSSS--EEEEECTTTCCEEEEEECEETTEECCCEEEEEEETT-EEEEEETTTT
T ss_pred EeCCCCce---EE--eeCCCEEEEE--CCCC--eEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCC-EEEEEECCCC
Confidence 88765332 33 2456677764 3422 789999999999988876542 1111 11222343 3444444567
Q ss_pred eEEEEEeecCeeeeEEEeecccC
Q 003791 247 ILVTVSFKNRKIAFQETHLSNLG 269 (795)
Q Consensus 247 ~L~v~~l~sg~~~~~~~~l~~l~ 269 (795)
.+.++|.++|++ ...+.+..|.
T Consensus 171 ~I~vIDp~tG~V-~~~idl~~l~ 192 (243)
T 3mbr_X 171 RIARIDPASGKV-VAWIDLQALV 192 (243)
T ss_dssp EEEEECTTTCBE-EEEEECGGGS
T ss_pred eEEEEECCCCCE-EEEEECCcCc
Confidence 899999999984 6777776554
No 93
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.36 E-value=0.071 Score=55.86 Aligned_cols=154 Identities=10% Similarity=-0.005 Sum_probs=94.5
Q ss_pred CCEEEEEeCCCEEEEEECcCCccceEEEcCC----cceeeeeeeeeC----CEEEEEEccCCeEEEEeCCCCcEeEEEec
Q 003791 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGI----NDVVDGIDIALG----KYVITLSSDGSTLRAWNLPDGQMVWESFL 124 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~----~~~i~~l~~~~g----~~~V~Vs~~g~~v~A~d~~tG~llWe~~~ 124 (795)
+..+++++.++.|.-.|..+|+.+.....-. ...+..+..... +..++.++.++.|+.||..+|+.+.+...
T Consensus 34 ~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~ 113 (366)
T 3k26_A 34 DPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVG 113 (366)
T ss_dssp SCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEES
T ss_pred CceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecC
Confidence 4568888888999999999998876654211 122333322222 34566566678999999999999998875
Q ss_pred cCccccCCceeccccccccCCCeEEEEe-CCEEEEEECCCCcEEEEEec-cCcceeeeeEEEEecCCEEEEEEecCCcee
Q 003791 125 RGSKHSKPLLLVPTNLKVDKDSLILVSS-KGCLHAVSSIDGEILWTRDF-AAESVEVQQVIQLDESDQIYVVGYAGSSQF 202 (795)
Q Consensus 125 ~~~~~s~~~~~~~~~~~~~~~~~V~V~~-~g~l~ald~~tG~~~W~~~~-~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~ 202 (795)
..... ..+.+. ......++..+ +|.+...|..+|+....+.. ......+..+.....+..++..+.+|
T Consensus 114 ~~~~i-~~~~~~-----~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---- 183 (366)
T 3k26_A 114 HGNAI-NELKFH-----PRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDH---- 183 (366)
T ss_dssp CCSCE-EEEEEC-----SSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTS----
T ss_pred CCCcE-EEEEEC-----CCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCC----
Confidence 44332 111121 11134444444 89999999999998888732 11111122332223344555544455
Q ss_pred EEEEEEcCCCceee
Q 003791 203 HAYQINAMNGELLN 216 (795)
Q Consensus 203 ~v~ald~~tG~~~w 216 (795)
.+..+|..+|+.+.
T Consensus 184 ~i~i~d~~~~~~~~ 197 (366)
T 3k26_A 184 SLKLWRINSKRMMN 197 (366)
T ss_dssp CEEEEESCSHHHHH
T ss_pred CEEEEECCCCcccc
Confidence 68888999887654
No 94
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.35 E-value=0.0099 Score=61.94 Aligned_cols=154 Identities=14% Similarity=0.060 Sum_probs=102.7
Q ss_pred CCEEEEEEc-cCCeEEEEeCCCCcEeEEEeccCccccCCceeccccccccCCCeEEEEe--CCEEEEEECCCCcEEEEEe
Q 003791 95 GKYVITLSS-DGSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSS--KGCLHAVSSIDGEILWTRD 171 (795)
Q Consensus 95 g~~~V~Vs~-~g~~v~A~d~~tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~~--~g~l~ald~~tG~~~W~~~ 171 (795)
.++.+|+|+ ..+.|+.+|++||+++-+. +..... +..+ ..+ ++.++++. ++.++.+|.+|++++=+++
T Consensus 63 ~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~F--geGi-----t~~-g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~ 133 (268)
T 3nok_A 63 HQGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIF--AEGL-----ASD-GERLYQLTWTEGLLFTWSGMPPQRERTTR 133 (268)
T ss_dssp ETTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCC--EEEE-----EEC-SSCEEEEESSSCEEEEEETTTTEEEEEEE
T ss_pred ECCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcc--eeEE-----EEe-CCEEEEEEccCCEEEEEECCcCcEEEEEe
Confidence 346777754 4567999999999999988 665432 1112 223 46788874 8999999999999999988
Q ss_pred ccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcCCCceeeeeeeecc-CCcc--cceEEecCcEEEEEECCCCeE
Q 003791 172 FAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHETAAFS-GGFV--GDVALVSSDTLVTLDTTRSIL 248 (795)
Q Consensus 172 ~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~tG~~~w~~~v~~~-~~~~--~~~~~vg~~~lv~~d~~~~~L 248 (795)
.+.... .+ ...++.+|+.. |+ -++..+|++|++.+....+... ..+. +..-.+++ .+++....++.+
T Consensus 134 ~~~eGw---GL--t~Dg~~L~vSd--Gs--~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG-~lyanvw~s~~I 203 (268)
T 3nok_A 134 YSGEGW---GL--CYWNGKLVRSD--GG--TMLTFHEPDGFALVGAVQVKLRGQPVELINELECANG-VIYANIWHSSDV 203 (268)
T ss_dssp CSSCCC---CE--EEETTEEEEEC--SS--SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETT-EEEEEETTCSEE
T ss_pred CCCcee---EE--ecCCCEEEEEC--CC--CEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCC-EEEEEECCCCeE
Confidence 754322 23 24567788643 32 2789999999999988876542 2221 11223343 444454456789
Q ss_pred EEEEeecCeeeeEEEeeccc
Q 003791 249 VTVSFKNRKIAFQETHLSNL 268 (795)
Q Consensus 249 ~v~~l~sg~~~~~~~~l~~l 268 (795)
.++|.++|++ ...+.+..|
T Consensus 204 ~vIDp~TG~V-~~~Idl~~L 222 (268)
T 3nok_A 204 LEIDPATGTV-VGVIDASAL 222 (268)
T ss_dssp EEECTTTCBE-EEEEECHHH
T ss_pred EEEeCCCCcE-EEEEECCCC
Confidence 9999999984 566666543
No 95
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.34 E-value=0.037 Score=56.71 Aligned_cols=182 Identities=13% Similarity=0.115 Sum_probs=110.4
Q ss_pred CCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeee-CCEEEEEEccCCeEEEEeCCCCcEeEEEec-cCcccc
Q 003791 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIAL-GKYVITLSSDGSTLRAWNLPDGQMVWESFL-RGSKHS 130 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~-g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~-~~~~~s 130 (795)
++.+++++.+|.|...| +++..+........ +..+.... .+..++.++.++.++.|| .++..-.... .....
T Consensus 114 ~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i- 187 (313)
T 3odt_A 114 DGVVISGSWDKTAKVWK--EGSLVYNLQAHNAS-VWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVV- 187 (313)
T ss_dssp TTEEEEEETTSEEEEEE--TTEEEEEEECCSSC-EEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCE-
T ss_pred CCEEEEEeCCCCEEEEc--CCcEEEecccCCCc-eeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccE-
Confidence 66799999999999999 78888777654432 32221222 444555566667999999 5666655554 22111
Q ss_pred CCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEc
Q 003791 131 KPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINA 209 (795)
Q Consensus 131 ~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~ 209 (795)
..+.. ..++.+++. .+|.+..+|..+|+...++....... ..+.. ..++.++..+.+| .+..+|.
T Consensus 188 ~~~~~-------~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i--~~~~~-~~~~~l~~~~~dg----~v~iwd~ 253 (313)
T 3odt_A 188 RHLAV-------VDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHESFV--YCIKL-LPNGDIVSCGEDR----TVRIWSK 253 (313)
T ss_dssp EEEEE-------EETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCE--EEEEE-CTTSCEEEEETTS----EEEEECT
T ss_pred EEEEE-------cCCCeEEEccCCCeEEEEECCchhhhhhhhcCCceE--EEEEE-ecCCCEEEEecCC----EEEEEEC
Confidence 11111 124455554 49999999999999999887544332 22321 2344555555454 7899999
Q ss_pred CCCceeeeeeeeccCCcccceEEecCcEEEEEECCCCeEEEEEeecCe
Q 003791 210 MNGELLNHETAAFSGGFVGDVALVSSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 210 ~tG~~~w~~~v~~~~~~~~~~~~vg~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
.+|+.+....... ..+. .+.+..++.+++.. ..+.+++-++.+++
T Consensus 254 ~~~~~~~~~~~~~-~~i~-~~~~~~~~~~~~~~-~dg~i~iw~~~~~~ 298 (313)
T 3odt_A 254 ENGSLKQVITLPA-ISIW-SVDCMSNGDIIVGS-SDNLVRIFSQEKSR 298 (313)
T ss_dssp TTCCEEEEEECSS-SCEE-EEEECTTSCEEEEE-TTSCEEEEESCGGG
T ss_pred CCCceeEEEeccC-ceEE-EEEEccCCCEEEEe-CCCcEEEEeCCCCc
Confidence 9999887664221 1121 12222222344444 46889999998876
No 96
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.34 E-value=0.14 Score=54.81 Aligned_cols=191 Identities=11% Similarity=0.060 Sum_probs=106.0
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcCCc-----------------------------------------------
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGIN----------------------------------------------- 84 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~----------------------------------------------- 84 (795)
++..+++++.+|.|.-.|..+|+..-.......
T Consensus 75 d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~ 154 (354)
T 2pbi_B 75 DKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHT 154 (354)
T ss_dssp TSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECS
T ss_pred CCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccC
Confidence 466788899999998888888875443332110
Q ss_pred ceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccCCceeccccccccCCC-eEEEE-eCCEEEEEECC
Q 003791 85 DVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDS-LILVS-SKGCLHAVSSI 162 (795)
Q Consensus 85 ~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~-~V~V~-~~g~l~ald~~ 162 (795)
..+..+.....+..++.++.++.++.||..+|+++-......... ....+. ...++ .++.. .+|.+...|..
T Consensus 155 ~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v-~~~~~~-----~~~~g~~l~sgs~Dg~v~~wd~~ 228 (354)
T 2pbi_B 155 NYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADV-LCLDLA-----PSETGNTFVSGGCDKKAMVWDMR 228 (354)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCE-EEEEEC-----CCSSCCEEEEEETTSCEEEEETT
T ss_pred CcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCe-EEEEEE-----eCCCCCEEEEEeCCCeEEEEECC
Confidence 001111111122234435556799999999999887776544322 111111 12123 34444 39999999999
Q ss_pred CCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcCCCceeeeeeeeccCCccc--ceEEe-cCcEEE
Q 003791 163 DGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHETAAFSGGFVG--DVALV-SSDTLV 239 (795)
Q Consensus 163 tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~tG~~~w~~~v~~~~~~~~--~~~~v-g~~~lv 239 (795)
+|+..-.+....... ..+.....+..++..+.++ .+..+|..+++.+..... .....+ .+.+- .+.+++
T Consensus 229 ~~~~~~~~~~h~~~v--~~v~~~p~~~~l~s~s~D~----~v~lwd~~~~~~~~~~~~--~~~~~~~~~~~~s~~g~~l~ 300 (354)
T 2pbi_B 229 SGQCVQAFETHESDV--NSVRYYPSGDAFASGSDDA----TCRLYDLRADREVAIYSK--ESIIFGASSVDFSLSGRLLF 300 (354)
T ss_dssp TCCEEEEECCCSSCE--EEEEECTTSSEEEEEETTS----CEEEEETTTTEEEEEECC--TTCCSCEEEEEECTTSSEEE
T ss_pred CCcEEEEecCCCCCe--EEEEEeCCCCEEEEEeCCC----eEEEEECCCCcEEEEEcC--CCcccceeEEEEeCCCCEEE
Confidence 999877765433322 2222222344455444444 577789888876543321 111111 12221 344555
Q ss_pred EEECCCCeEEEEEeecCe
Q 003791 240 TLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 240 ~~d~~~~~L~v~~l~sg~ 257 (795)
+.. ..+.+++-|+.+++
T Consensus 301 ~g~-~d~~i~vwd~~~~~ 317 (354)
T 2pbi_B 301 AGY-NDYTINVWDVLKGS 317 (354)
T ss_dssp EEE-TTSCEEEEETTTCS
T ss_pred EEE-CCCcEEEEECCCCc
Confidence 554 45788888887776
No 97
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.33 E-value=0.01 Score=61.00 Aligned_cols=150 Identities=12% Similarity=0.084 Sum_probs=96.2
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccC
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~ 131 (795)
.++.+++++.+|.|...| .++..-+........+..+....++. ++.++.++.++.||..+|+.+.+........ .
T Consensus 154 ~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i-~ 229 (313)
T 3odt_A 154 SENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFV-Y 229 (313)
T ss_dssp TTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCE-E
T ss_pred CCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceE-E
Confidence 467899999999999998 45554444432333344443334444 5546667899999999999999987654432 1
Q ss_pred CceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcC
Q 003791 132 PLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAM 210 (795)
Q Consensus 132 ~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~ 210 (795)
.+.+.+ ++.++.. .+|.+...|..+|+............ ..+. ...++.+++.+.+| .+..+|..
T Consensus 230 ~~~~~~-------~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i--~~~~-~~~~~~~~~~~~dg----~i~iw~~~ 295 (313)
T 3odt_A 230 CIKLLP-------NGDIVSCGEDRTVRIWSKENGSLKQVITLPAISI--WSVD-CMSNGDIIVGSSDN----LVRIFSQE 295 (313)
T ss_dssp EEEECT-------TSCEEEEETTSEEEEECTTTCCEEEEEECSSSCE--EEEE-ECTTSCEEEEETTS----CEEEEESC
T ss_pred EEEEec-------CCCEEEEecCCEEEEEECCCCceeEEEeccCceE--EEEE-EccCCCEEEEeCCC----cEEEEeCC
Confidence 222222 3445555 49999999999999999987765432 2232 12344555544444 68888998
Q ss_pred CCceeeeee
Q 003791 211 NGELLNHET 219 (795)
Q Consensus 211 tG~~~w~~~ 219 (795)
+|+.+.+..
T Consensus 296 ~~~~~~~~~ 304 (313)
T 3odt_A 296 KSRWASEDE 304 (313)
T ss_dssp GGGCCC---
T ss_pred CCceeehhh
Confidence 888776653
No 98
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.33 E-value=0.21 Score=59.22 Aligned_cols=148 Identities=9% Similarity=0.003 Sum_probs=85.9
Q ss_pred CCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccCCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEecc
Q 003791 95 GKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFA 173 (795)
Q Consensus 95 g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~ 173 (795)
.+..+++++.++.|+.||..+|+.+.+........ ..+.+.+ + ++.+++. .+|.+...|..+|+...+....
T Consensus 24 ~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v-~~~~~s~-----~-~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~ 96 (814)
T 3mkq_A 24 TEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPV-RAGKFIA-----R-KNWIIVGSDDFRIRVFNYNTGEKVVDFEAH 96 (814)
T ss_dssp SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCE-EEEEEEG-----G-GTEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred CCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcE-EEEEEeC-----C-CCEEEEEeCCCeEEEEECCCCcEEEEEecC
Confidence 34455556667799999999999999888654433 1222222 2 2344444 4899999999999999888654
Q ss_pred CcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcCCCceeeeeeeeccCCcccceEEe--cCcEEEEEECCCCeEEEE
Q 003791 174 AESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHETAAFSGGFVGDVALV--SSDTLVTLDTTRSILVTV 251 (795)
Q Consensus 174 ~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~tG~~~w~~~v~~~~~~~~~~~~v--g~~~lv~~d~~~~~L~v~ 251 (795)
.... ..+..+..+..++..+.+| .+..+|..+|...-+........+.. +.+- +++.+++.. ..+.+.+.
T Consensus 97 ~~~v--~~~~~s~~~~~l~~~~~dg----~i~vw~~~~~~~~~~~~~~~~~~v~~-~~~~p~~~~~l~~~~-~dg~v~vw 168 (814)
T 3mkq_A 97 PDYI--RSIAVHPTKPYVLSGSDDL----TVKLWNWENNWALEQTFEGHEHFVMC-VAFNPKDPSTFASGC-LDRTVKVW 168 (814)
T ss_dssp SSCE--EEEEECSSSSEEEEEETTS----EEEEEEGGGTSEEEEEEECCSSCEEE-EEEETTEEEEEEEEE-TTSEEEEE
T ss_pred CCCE--EEEEEeCCCCEEEEEcCCC----EEEEEECCCCceEEEEEcCCCCcEEE-EEEEcCCCCEEEEEe-CCCeEEEE
Confidence 3322 2222223344455444344 68888888874332221111122211 1221 223455444 46889999
Q ss_pred EeecCe
Q 003791 252 SFKNRK 257 (795)
Q Consensus 252 ~l~sg~ 257 (795)
++.++.
T Consensus 169 d~~~~~ 174 (814)
T 3mkq_A 169 SLGQST 174 (814)
T ss_dssp ETTCSS
T ss_pred ECCCCc
Confidence 987765
No 99
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.31 E-value=0.054 Score=56.65 Aligned_cols=195 Identities=9% Similarity=0.067 Sum_probs=109.6
Q ss_pred CCEEEEEeCCCEEEEEECcCCc-cceEEEcCCcceeeeeee------eeCCEEEEEEccCCeEEEEeCCCCc-EeEEEec
Q 003791 53 RKRVVVSTEENVIASLDLRHGE-IFWRHVLGINDVVDGIDI------ALGKYVITLSSDGSTLRAWNLPDGQ-MVWESFL 124 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~-ivWR~~l~~~~~i~~l~~------~~g~~~V~Vs~~g~~v~A~d~~tG~-llWe~~~ 124 (795)
++.+++++.+|.|...|.++|+ .+....-. ...+..+.. ..++..++.++.++.++.||..+|+ .+.....
T Consensus 80 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~ 158 (357)
T 3i2n_A 80 QRYLATGDFGGNLHIWNLEAPEMPVYSVKGH-KEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEP 158 (357)
T ss_dssp TCCEEEEETTSCEEEECTTSCSSCSEEECCC-SSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECC
T ss_pred CceEEEecCCCeEEEEeCCCCCccEEEEEec-ccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccc
Confidence 3679999999999999999998 66554322 222332211 1233355546666799999999998 6666654
Q ss_pred cCccccCCceeccccccccCCC-eEEEEe-CCEEEEEECCCCcEEEEEeccCcceeeeeEEEEe---cCCEEEEEEecCC
Q 003791 125 RGSKHSKPLLLVPTNLKVDKDS-LILVSS-KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLD---ESDQIYVVGYAGS 199 (795)
Q Consensus 125 ~~~~~s~~~~~~~~~~~~~~~~-~V~V~~-~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~---~~~~Vyvv~~~g~ 199 (795)
...........+..+.....++ .+++.+ +|.+..+|..+|+..+........ ..+.... .++.+++.+.+|
T Consensus 159 ~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v---~~~~~~~~~~~~~~l~~~~~dg- 234 (357)
T 3i2n_A 159 VQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGV---CSLEFDRKDISMNKLVATSLEG- 234 (357)
T ss_dssp CTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCE---EEEEESCSSSSCCEEEEEESTT-
T ss_pred cCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCce---EEEEcCCCCCCCCEEEEECCCC-
Confidence 3321101111110000011133 444444 799999999999998876554332 2232222 345555544444
Q ss_pred ceeEEEEEEcCCCceeeeeeeec----cCCcccceEEec-Cc-EEEEEECCCCeEEEEEeecCe
Q 003791 200 SQFHAYQINAMNGELLNHETAAF----SGGFVGDVALVS-SD-TLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 200 ~~~~v~ald~~tG~~~w~~~v~~----~~~~~~~~~~vg-~~-~lv~~d~~~~~L~v~~l~sg~ 257 (795)
.+..+|..+++.+....... ...+. .+.+.. +. ++++.. ..|.+++-++.++.
T Consensus 235 ---~i~i~d~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~ 293 (357)
T 3i2n_A 235 ---KFHVFDMRTQHPTKGFASVSEKAHKSTVW-QVRHLPQNRELFLTAG-GAGGLHLWKYEYPI 293 (357)
T ss_dssp ---EEEEEEEEEEETTTEEEEEEEECCSSCEE-EEEEETTEEEEEEEEE-TTSEEEEEEEECCS
T ss_pred ---eEEEEeCcCCCcccceeeeccCCCcCCEE-EEEECCCCCcEEEEEe-CCCcEEEeecCCCc
Confidence 67788888887765543211 11111 122222 23 455554 46889988888765
No 100
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.27 E-value=0.23 Score=51.34 Aligned_cols=189 Identities=14% Similarity=0.191 Sum_probs=95.6
Q ss_pred CCEEEEE-eCCCEEEEEECc-CCccceEEEcCCcceeeeeeeeeCCEEEEEEcc-CCeEEEEeCC--CCcEe--EEEecc
Q 003791 53 RKRVVVS-TEENVIASLDLR-HGEIFWRHVLGINDVVDGIDIALGKYVITLSSD-GSTLRAWNLP--DGQMV--WESFLR 125 (795)
Q Consensus 53 ~~~v~va-t~~g~l~ALn~~-tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~-g~~v~A~d~~--tG~ll--We~~~~ 125 (795)
++.+|++ +.++.|..+|.. +|+..=.+.+.....+..+....++..+++++. ++.++.|+.. +|++. -+....
T Consensus 4 ~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 83 (343)
T 1ri6_A 4 KQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP 83 (343)
T ss_dssp EEEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS
T ss_pred eEEEEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC
Confidence 3457877 568999999874 564322222222222333322333444555543 4799999987 77743 333322
Q ss_pred CccccCCceeccccccccCCCeEEEEe--CCEEEEEECCCCc---EEEEEeccCcceeeeeEEEEecCCEEEEEEecCCc
Q 003791 126 GSKHSKPLLLVPTNLKVDKDSLILVSS--KGCLHAVSSIDGE---ILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSS 200 (795)
Q Consensus 126 ~~~~s~~~~~~~~~~~~~~~~~V~V~~--~g~l~ald~~tG~---~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~ 200 (795)
... ..+.+.+ + ++.+++.. ++.+..+|..+|. .......... +..+..+..+..+|+.+...+
T Consensus 84 ~~~--~~~~~s~-----d-g~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~---~~~~~~s~dg~~l~~~~~~~~- 151 (343)
T 1ri6_A 84 GSL--THISTDH-----Q-GQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDG---CHSANISPDNRTLWVPALKQD- 151 (343)
T ss_dssp SCC--SEEEECT-----T-SSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTT---BCCCEECTTSSEEEEEEGGGT-
T ss_pred CCC--cEEEEcC-----C-CCEEEEEecCCCeEEEEECCCCccccccccccCCCC---ceEEEECCCCCEEEEecCCCC-
Confidence 211 1111111 2 34466653 7888888885543 3333322211 222322334556777653323
Q ss_pred eeEEEEEEcCC-Cceeeee--eeeccCCccc-ceEEe-cCcEEEEEECCCCeEEEEEeec
Q 003791 201 QFHAYQINAMN-GELLNHE--TAAFSGGFVG-DVALV-SSDTLVTLDTTRSILVTVSFKN 255 (795)
Q Consensus 201 ~~~v~ald~~t-G~~~w~~--~v~~~~~~~~-~~~~v-g~~~lv~~d~~~~~L~v~~l~s 255 (795)
.+..+|..+ |+..... ....+.+-.. .+.+- .+..+++.+...+.+.+.++..
T Consensus 152 --~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~ 209 (343)
T 1ri6_A 152 --RICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKD 209 (343)
T ss_dssp --EEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSC
T ss_pred --EEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 678888877 7654322 2222211111 12222 3445666766678899998843
No 101
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.22 E-value=0.19 Score=51.06 Aligned_cols=183 Identities=11% Similarity=0.140 Sum_probs=99.9
Q ss_pred CCEEEEEeC-CCEEEEEECcCCccceEEEcCCc-ceeeeeeeeeCCEEEEEEc-cCCeEEEEeCCCCcEeEEEeccCccc
Q 003791 53 RKRVVVSTE-ENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIALGKYVITLSS-DGSTLRAWNLPDGQMVWESFLRGSKH 129 (795)
Q Consensus 53 ~~~v~vat~-~g~l~ALn~~tG~ivWR~~l~~~-~~i~~l~~~~g~~~V~Vs~-~g~~v~A~d~~tG~llWe~~~~~~~~ 129 (795)
++.+|+++. .+.|..+|+. |+.. +..++.. ..+.++. ...++.++++. .++.|+.||.. |+.. ...+....
T Consensus 25 ~g~l~v~~~~~~~v~~~d~~-~~~~-~~~~~~~~~~~~~i~-~~~~g~l~v~~~~~~~i~~~~~~-g~~~-~~~~~~~~- 98 (299)
T 2z2n_A 25 KGKVWITQHKANMISCINLD-GKIT-EYPLPTPDAKVMCLT-ISSDGEVWFTENAANKIGRITKK-GIIK-EYTLPNPD- 98 (299)
T ss_dssp TSCEEEEETTTTEEEEECTT-CCEE-EEECSSTTCCEEEEE-ECTTSCEEEEETTTTEEEEECTT-SCEE-EEECSSTT-
T ss_pred CCCEEEEecCCCcEEEEcCC-CCeE-EecCCcccCceeeEE-ECCCCCEEEeCCCCCeEEEECCC-CcEE-EEeCCCcC-
Confidence 667999987 6899999998 7654 3333322 2233442 22344555554 35789999986 6542 22222111
Q ss_pred cCCceeccccccccCCCeEEEEe--CCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEE
Q 003791 130 SKPLLLVPTNLKVDKDSLILVSS--KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQI 207 (795)
Q Consensus 130 s~~~~~~~~~~~~~~~~~V~V~~--~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~al 207 (795)
..+..+ ..+.++.+++.. ++.+.++|. +|+.... ..+.....+..+. ...++.+|+.....+ .+..+
T Consensus 99 -~~~~~i----~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~-~~~~~~~~~~~i~-~~~~g~l~v~~~~~~---~i~~~ 167 (299)
T 2z2n_A 99 -SAPYGI----TEGPNGDIWFTEMNGNRIGRITD-DGKIREY-ELPNKGSYPSFIT-LGSDNALWFTENQNN---AIGRI 167 (299)
T ss_dssp -CCEEEE----EECTTSCEEEEETTTTEEEEECT-TCCEEEE-ECSSTTCCEEEEE-ECTTSCEEEEETTTT---EEEEE
T ss_pred -CCceee----EECCCCCEEEEecCCceEEEECC-CCCEEEe-cCCCCCCCCceEE-EcCCCCEEEEeCCCC---EEEEE
Confidence 111111 234456777764 689999998 7876532 2222222243443 234678888664433 68899
Q ss_pred EcCCCceeeeeeeeccCCccc-ceEEe-cCcEEEEEECCCCeEEEEEeecCe
Q 003791 208 NAMNGELLNHETAAFSGGFVG-DVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 208 d~~tG~~~w~~~v~~~~~~~~-~~~~v-g~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
|+ +|+...- ..+..... ..+.+ .++.+.+.+...+.+.+.+. +++
T Consensus 168 ~~-~g~~~~~---~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~ 214 (299)
T 2z2n_A 168 TE-SGDITEF---KIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGE 214 (299)
T ss_dssp CT-TCCEEEE---ECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC
T ss_pred cC-CCcEEEe---eCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCc
Confidence 98 8876532 12222222 12222 22334455555567888887 665
No 102
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.21 E-value=0.023 Score=59.09 Aligned_cols=154 Identities=9% Similarity=0.001 Sum_probs=103.7
Q ss_pred CEEEEEEcc-C--CeEEEEeCCCCcEeEEEeccCccccCCceeccccccccCCCeEEEEe--CCEEEEEECCCCcEEEEE
Q 003791 96 KYVITLSSD-G--STLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSS--KGCLHAVSSIDGEILWTR 170 (795)
Q Consensus 96 ~~~V~Vs~~-g--~~v~A~d~~tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~~--~g~l~ald~~tG~~~W~~ 170 (795)
++.+|+|+. . +.|+.+|++||+++=+..+..... ...+ ..+ ++.++++. ++.++.+|.+|++++=+.
T Consensus 52 ~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~F--geGi-----t~~-g~~ly~ltw~~~~v~v~D~~t~~~~~ti 123 (262)
T 3nol_A 52 NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYF--GEGI-----SDW-KDKIVGLTWKNGLGFVWNIRNLRQVRSF 123 (262)
T ss_dssp TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCC--EEEE-----EEE-TTEEEEEESSSSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccc--eeEE-----EEe-CCEEEEEEeeCCEEEEEECccCcEEEEE
Confidence 457888652 2 489999999999999888765433 1112 223 56788874 899999999999999998
Q ss_pred eccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcCCCceeeeeeeecc----CCcccceEEecCcEEEEEECCCC
Q 003791 171 DFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHETAAFS----GGFVGDVALVSSDTLVTLDTTRS 246 (795)
Q Consensus 171 ~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~tG~~~w~~~v~~~----~~~~~~~~~vg~~~lv~~d~~~~ 246 (795)
+.+.... .+ ...++.+|+. +|+ -++..+|++|++.+....+... ..+.+ .-+++ +.+.+..-.++
T Consensus 124 ~~~~eG~---gl--t~dg~~L~~S--dGs--~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNE-Le~~~-G~lyan~w~~~ 192 (262)
T 3nol_A 124 NYDGEGW---GL--THNDQYLIMS--DGT--PVLRFLDPESLTPVRTITVTAHGEELPELNE-LEWVD-GEIFANVWQTN 192 (262)
T ss_dssp ECSSCCC---CE--EECSSCEEEC--CSS--SEEEEECTTTCSEEEEEECEETTEECCCEEE-EEEET-TEEEEEETTSS
T ss_pred ECCCCce---EE--ecCCCEEEEE--CCC--CeEEEEcCCCCeEEEEEEeccCCccccccce-eEEEC-CEEEEEEccCC
Confidence 8764322 23 2356677763 332 2789999999999988876431 11222 22334 44445555567
Q ss_pred eEEEEEeecCeeeeEEEeecccC
Q 003791 247 ILVTVSFKNRKIAFQETHLSNLG 269 (795)
Q Consensus 247 ~L~v~~l~sg~~~~~~~~l~~l~ 269 (795)
.+.++|.++|++ ...+.+..|.
T Consensus 193 ~I~vIDp~tG~V-~~~Id~~~L~ 214 (262)
T 3nol_A 193 KIVRIDPETGKV-TGIIDLNGIL 214 (262)
T ss_dssp EEEEECTTTCBE-EEEEECTTGG
T ss_pred eEEEEECCCCcE-EEEEECCcCc
Confidence 899999999984 5666665543
No 103
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.18 E-value=0.054 Score=58.67 Aligned_cols=187 Identities=16% Similarity=0.146 Sum_probs=101.7
Q ss_pred EeCCCEEEEEECcC-Ccc--ceEEEcCCcceeeeeeeee-CCEEEEEEccCCeEEEEeCCCC-------cEeEEEeccCc
Q 003791 59 STEENVIASLDLRH-GEI--FWRHVLGINDVVDGIDIAL-GKYVITLSSDGSTLRAWNLPDG-------QMVWESFLRGS 127 (795)
Q Consensus 59 at~~g~l~ALn~~t-G~i--vWR~~l~~~~~i~~l~~~~-g~~~V~Vs~~g~~v~A~d~~tG-------~llWe~~~~~~ 127 (795)
++.+|.|.-.|..+ |+. ..+........+..+.... ++..++.++.++.|+.||..+| +.+........
T Consensus 53 ~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~ 132 (402)
T 2aq5_A 53 ASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTK 132 (402)
T ss_dssp CSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSS
T ss_pred EcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCC
Confidence 56789999998754 332 1111111122344442222 4456665666789999999999 44555544332
Q ss_pred cccCCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEe--ccCcceeeeeEEEEecCCEEEEEEecCCceeEE
Q 003791 128 KHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRD--FAAESVEVQQVIQLDESDQIYVVGYAGSSQFHA 204 (795)
Q Consensus 128 ~~s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~--~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v 204 (795)
.. ..+.+.+ ++...++.. .+|.+...|..+|+...+.. ..... ...+..+..+..++..+.+| .+
T Consensus 133 ~v-~~~~~~p-----~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~~d~----~i 200 (402)
T 2aq5_A 133 RV-GIVAWHP-----TAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDT--IYSVDWSRDGALICTSCRDK----RV 200 (402)
T ss_dssp CE-EEEEECS-----SBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSC--EEEEEECTTSSCEEEEETTS----EE
T ss_pred eE-EEEEECc-----CCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCc--eEEEEECCCCCEEEEEecCC----cE
Confidence 22 1111211 211334444 38999999999999988873 22221 22232223344555544454 78
Q ss_pred EEEEcCCCceeeeeeeeccCCcccceEEecCc-EEEEEE--CCCCeEEEEEeecCe
Q 003791 205 YQINAMNGELLNHETAAFSGGFVGDVALVSSD-TLVTLD--TTRSILVTVSFKNRK 257 (795)
Q Consensus 205 ~ald~~tG~~~w~~~v~~~~~~~~~~~~vg~~-~lv~~d--~~~~~L~v~~l~sg~ 257 (795)
..+|+.+|+.+.+............+.+..++ ++++.. ...+.+.+.|+.++.
T Consensus 201 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 201 RVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLE 256 (402)
T ss_dssp EEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCS
T ss_pred EEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCcccc
Confidence 99999999988765211111111123333333 444431 356788899988765
No 104
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.18 E-value=0.29 Score=50.76 Aligned_cols=147 Identities=10% Similarity=0.002 Sum_probs=84.2
Q ss_pred CEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccCCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEeccC
Q 003791 96 KYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAA 174 (795)
Q Consensus 96 ~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~ 174 (795)
+..++.++.++.|+.||..+|..+.......... ....+.+ + .+.++.. .++.+...|..+|+...++....
T Consensus 25 ~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v-~~~~~~~-----~-~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~ 97 (304)
T 2ynn_A 25 EPWVLTTLYSGRVELWNYETQVEVRSIQVTETPV-RAGKFIA-----R-KNWIIVGSDDFRIRVFNYNTGEKVVDFEAHP 97 (304)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCE-EEEEEEG-----G-GTEEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred CCEEEEEcCCCcEEEEECCCCceeEEeeccCCcE-EEEEEeC-----C-CCEEEEECCCCEEEEEECCCCcEEEEEeCCC
Confidence 3344445667899999999999988877654432 1122222 2 3444444 48999999999999988876544
Q ss_pred cceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcCCCceeeeeeeeccCCcccceEEe--cCcEEEEEECCCCeEEEEE
Q 003791 175 ESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHETAAFSGGFVGDVALV--SSDTLVTLDTTRSILVTVS 252 (795)
Q Consensus 175 ~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~tG~~~w~~~v~~~~~~~~~~~~v--g~~~lv~~d~~~~~L~v~~ 252 (795)
... ..+.....+..++..+.+| .+...|..+|....+....-...+. .+.+- +...++... ..+.+.+-|
T Consensus 98 ~~v--~~~~~~~~~~~l~sgs~D~----~v~lWd~~~~~~~~~~~~~h~~~v~-~v~~~p~~~~~l~sgs-~D~~v~iwd 169 (304)
T 2ynn_A 98 DYI--RSIAVHPTKPYVLSGSDDL----TVKLWNWENNWALEQTFEGHEHFVM-CVAFNPKDPSTFASGC-LDRTVKVWS 169 (304)
T ss_dssp SCE--EEEEECSSSSEEEEEETTS----CEEEEEGGGTTEEEEEECCCCSCEE-EEEECTTCTTEEEEEE-TTSEEEEEE
T ss_pred CcE--EEEEEcCCCCEEEEECCCC----eEEEEECCCCcchhhhhcccCCcEE-EEEECCCCCCEEEEEe-CCCeEEEEE
Confidence 332 2232223344455444444 5777888888554332111111111 11221 224555555 457888888
Q ss_pred eecCe
Q 003791 253 FKNRK 257 (795)
Q Consensus 253 l~sg~ 257 (795)
+.++.
T Consensus 170 ~~~~~ 174 (304)
T 2ynn_A 170 LGQST 174 (304)
T ss_dssp TTCSS
T ss_pred CCCCC
Confidence 87654
No 105
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.14 E-value=0.034 Score=58.35 Aligned_cols=187 Identities=12% Similarity=0.030 Sum_probs=109.1
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeee--eeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccc
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDI--ALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKH 129 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~--~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~ 129 (795)
+++.+++++.+|.|...|.++|+.+........ +..+.. ...+..++.++.++.++.||..+|+.+..........
T Consensus 97 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~--v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 174 (368)
T 3mmy_A 97 DGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAP--VKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCY 174 (368)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEEEECSSC--EEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEE
T ss_pred CCCEEEEEcCCCcEEEEEcCCCCceeeccccCc--eEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCce
Confidence 466799999999999999999998775544333 444422 2344455556667899999999999999988765332
Q ss_pred cCCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEeccCcceeeeeEEE-EecC----CEEEEEEecCCceeE
Q 003791 130 SKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQ-LDES----DQIYVVGYAGSSQFH 203 (795)
Q Consensus 130 s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~-s~~~----~~Vyvv~~~g~~~~~ 203 (795)
.. ... ...+++. .++.+..++..++...+......... ...++. .... +.+++.+.+| .
T Consensus 175 -----~~----~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dg----~ 239 (368)
T 3mmy_A 175 -----CA----DVI-YPMAVVATAERGLIVYQLENQPSEFRRIESPLKH-QHRCVAIFKDKQNKPTGFALGSIEG----R 239 (368)
T ss_dssp -----EE----EEE-TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSS-CEEEEEEEECTTSCEEEEEEEETTS----E
T ss_pred -----EE----Eec-CCeeEEEeCCCcEEEEEeccccchhhhccccccC-CCceEEEcccCCCCCCeEEEecCCC----c
Confidence 11 111 2344444 58889999988887777654332111 111111 1111 1244444344 6
Q ss_pred EEEEEcCCCce---eeeeeeeccC-----------CcccceEEe-cCcEEEEEECCCCeEEEEEeecCe
Q 003791 204 AYQINAMNGEL---LNHETAAFSG-----------GFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 204 v~ald~~tG~~---~w~~~v~~~~-----------~~~~~~~~v-g~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
+..+|..++.. +......... .+.. +.+- .+.++++.. ..|.+++-++.+++
T Consensus 240 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~sp~~~~l~s~~-~dg~i~iwd~~~~~ 306 (368)
T 3mmy_A 240 VAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNG-IAFHPVHGTLATVG-SDGRFSFWDKDART 306 (368)
T ss_dssp EEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEE-EEECTTTCCEEEEE-TTSCEEEEETTTTE
T ss_pred EEEEecCCCCccccceeeeeeecccccccccccccceEE-EEEecCCCEEEEEc-cCCeEEEEECCCCc
Confidence 77778877743 3322211110 1111 1111 334566665 45889999988876
No 106
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.13 E-value=0.29 Score=49.77 Aligned_cols=183 Identities=12% Similarity=0.082 Sum_probs=102.0
Q ss_pred CCEEEEEeC-CCEEEEEECcCCccceEEEcCCc-ceeeeeeeeeCCEEEEEEc-cCCeEEEEeCCCCcEeEEEeccCccc
Q 003791 53 RKRVVVSTE-ENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIALGKYVITLSS-DGSTLRAWNLPDGQMVWESFLRGSKH 129 (795)
Q Consensus 53 ~~~v~vat~-~g~l~ALn~~tG~ivWR~~l~~~-~~i~~l~~~~g~~~V~Vs~-~g~~v~A~d~~tG~llWe~~~~~~~~ 129 (795)
++.+|+++. .+.|..+|+. |+.. +..++.. ..+.++. ...++.++++. .++.|+.+|+. |+.. +.......
T Consensus 30 ~g~l~v~~~~~~~v~~~~~~-~~~~-~~~~~~~~~~~~~i~-~~~~g~l~v~~~~~~~v~~~d~~-g~~~-~~~~~~~~- 103 (300)
T 2qc5_A 30 DGKVWFTQHKANKISSLDQS-GRIK-EFEVPTPDAKVMCLI-VSSLGDIWFTENGANKIGKLSKK-GGFT-EYPLPQPD- 103 (300)
T ss_dssp TSCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEE-ECTTSCEEEEETTTTEEEEECTT-SCEE-EEECSSTT-
T ss_pred CCCEEEEcCCCCeEEEECCC-CceE-EEECCCCCCcceeEE-ECCCCCEEEEecCCCeEEEECCC-CCeE-EecCCCCC-
Confidence 567999885 6899999998 7754 3444432 2233342 23444566554 35789999998 8764 22322111
Q ss_pred cCCceeccccccccCCCeEEEEe--CCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEE
Q 003791 130 SKPLLLVPTNLKVDKDSLILVSS--KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQI 207 (795)
Q Consensus 130 s~~~~~~~~~~~~~~~~~V~V~~--~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~al 207 (795)
..+..+ ..+.++.+++.. ++.|+++|.. |+.. .+..+.....+..+. ...++.+|+....++ .+..+
T Consensus 104 -~~~~~i----~~~~~g~l~v~~~~~~~i~~~~~~-g~~~-~~~~~~~~~~~~~i~-~d~~g~l~v~~~~~~---~i~~~ 172 (300)
T 2qc5_A 104 -SGPYGI----TEGLNGDIWFTQLNGDRIGKLTAD-GTIY-EYDLPNKGSYPAFIT-LGSDNALWFTENQNN---SIGRI 172 (300)
T ss_dssp -CCEEEE----EECSTTCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEE-ECTTSSEEEEETTTT---EEEEE
T ss_pred -CCCccc----eECCCCCEEEEccCCCeEEEECCC-CCEE-EccCCCCCCCceeEE-ECCCCCEEEEecCCC---eEEEE
Confidence 111111 334456787764 7899999987 8776 333332222244443 234567887665433 68889
Q ss_pred EcCCCceeeeeeeeccCCccc-ceEEec-CcEEEEEECCCCeEEEEEeecCe
Q 003791 208 NAMNGELLNHETAAFSGGFVG-DVALVS-SDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 208 d~~tG~~~w~~~v~~~~~~~~-~~~~vg-~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
|. +|+... . ..+..... ..+.++ ++.+++.+...+.+.+.+. ++.
T Consensus 173 ~~-~g~~~~-~--~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~ 219 (300)
T 2qc5_A 173 TN-TGKLEE-Y--PLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGE 219 (300)
T ss_dssp CT-TCCEEE-E--ECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC
T ss_pred CC-CCcEEE-e--eCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCc
Confidence 98 777653 2 22222222 122232 3344455555567777776 554
No 107
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.12 E-value=0.12 Score=54.25 Aligned_cols=192 Identities=15% Similarity=0.106 Sum_probs=101.0
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcCCc-ceeeeeeeeeC--CEEEEEEccCCeEEEEeCCCCc--EeEEEeccC
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIALG--KYVITLSSDGSTLRAWNLPDGQ--MVWESFLRG 126 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~-~~i~~l~~~~g--~~~V~Vs~~g~~v~A~d~~tG~--llWe~~~~~ 126 (795)
+++.+++++.+|.|.-.|..++...-.+.+... ..+..+..... +..++.++.++.|+.||..+|+ .+.......
T Consensus 22 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~ 101 (379)
T 3jrp_A 22 YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHS 101 (379)
T ss_dssp SSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCS
T ss_pred CCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCC
Confidence 466788999999998888874433333333322 23444422211 3455545556799999999997 555554333
Q ss_pred ccccCCceeccccccccC-CCeEEEE-eCCEEEEEECCCCcE--EEEEeccCcceeeeeEEEEe-------------cCC
Q 003791 127 SKHSKPLLLVPTNLKVDK-DSLILVS-SKGCLHAVSSIDGEI--LWTRDFAAESVEVQQVIQLD-------------ESD 189 (795)
Q Consensus 127 ~~~s~~~~~~~~~~~~~~-~~~V~V~-~~g~l~ald~~tG~~--~W~~~~~~~~~~~~~vv~s~-------------~~~ 189 (795)
... ..+.+.+ +. ...+++. .+|.+...|..++.. .......... ...+.... .+.
T Consensus 102 ~~v-~~~~~~~-----~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~~~~~~~~~~~~~ 173 (379)
T 3jrp_A 102 ASV-NSVQWAP-----HEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIG--VNSASWAPATIEEDGEHNGTKESR 173 (379)
T ss_dssp SCE-EEEEECC-----GGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTC--EEEEEECCCC----------CTTC
T ss_pred cce-EEEEeCC-----CCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCc--eEEEEEcCccccccccccCCCCCC
Confidence 222 1111211 11 2334444 489999999988842 2222222111 11221111 234
Q ss_pred EEEEEEecCCceeEEEEEEcCCCceeeeeeeecc---CCcccceEEe-c---CcEEEEEECCCCeEEEEEeecCe
Q 003791 190 QIYVVGYAGSSQFHAYQINAMNGELLNHETAAFS---GGFVGDVALV-S---SDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 190 ~Vyvv~~~g~~~~~v~ald~~tG~~~w~~~v~~~---~~~~~~~~~v-g---~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
.+++.+.+| .+..+|..+++..+....... ..+. .+.+- . ++++++.. ..+.+.+-++.++.
T Consensus 174 ~l~~~~~dg----~i~i~d~~~~~~~~~~~~~~~~h~~~v~-~~~~sp~~~~~~~l~s~~-~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 174 KFVTGGADN----LVKIWKYNSDAQTYVLESTLEGHSDWVR-DVAWSPTVLLRSYLASVS-QDRTCIIWTQDNEQ 242 (379)
T ss_dssp EEEEEETTS----CEEEEEEETTTTEEEEEEEECCCSSCEE-EEEECCCCSSSEEEEEEE-TTSCEEEEEESSTT
T ss_pred EEEEEeCCC----eEEEEEecCCCcceeeEEEEecccCcEe-EEEECCCCCCCCeEEEEe-CCCEEEEEeCCCCC
Confidence 444444444 577778888876654432222 1111 12222 2 45666665 45889999988764
No 108
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=97.09 E-value=0.018 Score=65.75 Aligned_cols=154 Identities=18% Similarity=0.317 Sum_probs=92.8
Q ss_pred CEEEEEeCCCEEEEEECcCCccceEEEcCC----------cce--------eeeeee----eeCC--EEEEEEc---cCC
Q 003791 54 KRVVVSTEENVIASLDLRHGEIFWRHVLGI----------NDV--------VDGIDI----ALGK--YVITLSS---DGS 106 (795)
Q Consensus 54 ~~v~vat~~g~l~ALn~~tG~ivWR~~l~~----------~~~--------i~~l~~----~~g~--~~V~Vs~---~g~ 106 (795)
..||+++.+|.|.|+|+. |+++|-+.-.. +.- +++.+. ..++ ..+.+++ .|+
T Consensus 86 ~~VyvGaNDGmLHaF~a~-G~E~wAfiP~~~l~~L~~l~~~~y~~~~h~Y~VDG~p~~~Dv~~~g~wrtvLvggmg~GG~ 164 (570)
T 3hx6_A 86 PRVYVGANDGMLHGFDTD-GNETFAFIPSAVFEKMHKLTARGYQGGAHQFYVDGSPVVADAFFGGAWHTVLIGSLRAGGK 164 (570)
T ss_dssp CEEEEECSSSCEEECCSS-CCCCEEECCHHHHHHCC-------CCHHHHHHHHCCCEEEEEEETTEEEEEEEEECTTSCS
T ss_pred cEEEEECCCceEEEECCC-CcEEEEECCHHHHHHHHHHhccCccccCcceecCCCCEEEEEEeCCcceEEEEEecCCCCc
Confidence 569999999999999998 99999984321 100 111111 1222 3344443 467
Q ss_pred eEEEEeCCC---CcEeEEEeccCc-cc--cCCceeccccccccCCCeEEEEeC--------CEEEEEECCCCcEEEEEec
Q 003791 107 TLRAWNLPD---GQMVWESFLRGS-KH--SKPLLLVPTNLKVDKDSLILVSSK--------GCLHAVSSIDGEILWTRDF 172 (795)
Q Consensus 107 ~v~A~d~~t---G~llWe~~~~~~-~~--s~~~~~~~~~~~~~~~~~V~V~~~--------g~l~ald~~tG~~~W~~~~ 172 (795)
.++|+|..+ .+++||+....- .+ .-..+.+. .....+-++++.+ ..|+.+|+.+|..+|+...
T Consensus 165 ~~yALDVT~P~~p~~LWe~~~~~~~~LG~t~s~P~I~---~~~~g~w~~vfG~GY~~~~~~~~Lyv~d~~tG~li~~i~~ 241 (570)
T 3hx6_A 165 GLFALDVTDPANIKLLWEIGVDQEPDLGYSFPKPTVA---RLHNGKWAVVTGNGYSSMNDKAALLIIDMETGAITRKLEV 241 (570)
T ss_dssp EEEEEECSSGGGCEEEEEEETTTCTTCCBCCSCCEEE---ECTTSSEEEEEECCBSCTTCCEEEEEEETTTCCEEEEEEE
T ss_pred EEEEEECCCCCCCceeEEECCCCccccCccccCCEEE---EecCCCEEEEEccccCCCCCccEEEEEECCCCceEEEEec
Confidence 899999876 899999983211 11 11112222 1222345555532 4899999999999999876
Q ss_pred cCcc-----eeeeeEEEEe---cCCEEEEEEecCCceeEEEEEEcCCCcee
Q 003791 173 AAES-----VEVQQVIQLD---ESDQIYVVGYAGSSQFHAYQINAMNGELL 215 (795)
Q Consensus 173 ~~~~-----~~~~~vv~s~---~~~~Vyvv~~~g~~~~~v~ald~~tG~~~ 215 (795)
+... +....+++.. ..+.+|+....| .|.-+|+.+...-
T Consensus 242 ~~~~~~~~Gls~~~~~D~d~Dg~~D~~YaGDl~G----nlWRfDl~~~~~~ 288 (570)
T 3hx6_A 242 TGRTGVPNGLSSPRLADNNSDGVADYAYAGDLQG----NLWRFDLIAGKVN 288 (570)
T ss_dssp CCSTTSCCCEEEEEEECTTSSSBCCEEEEEETTS----EEEEEECSCSSCC
T ss_pred CCCCccCCccccceEEecCCCCceeEEEEEeCCC----cEEEEEcCCCCcc
Confidence 5321 1111122111 135788866666 7999999877653
No 109
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=97.07 E-value=0.04 Score=60.24 Aligned_cols=158 Identities=15% Similarity=0.097 Sum_probs=98.8
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcC-CcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCc-cc
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLG-INDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGS-KH 129 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~-~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~-~~ 129 (795)
++..+++++.+|.|...|.++|+.+++.... ....+..+.....+..++.++.++.|+.||..+|+.+-+...... ..
T Consensus 181 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v 260 (437)
T 3gre_A 181 EKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPI 260 (437)
T ss_dssp SCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEE
T ss_pred CCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCce
Confidence 3567899999999999999999999998763 223354443333445555566678999999999999887764322 11
Q ss_pred cCCceeccccccccCCCeEEEE--eCCEEEEEECCCCcEEEEEeccCcce-----e-------------------eeeEE
Q 003791 130 SKPLLLVPTNLKVDKDSLILVS--SKGCLHAVSSIDGEILWTRDFAAESV-----E-------------------VQQVI 183 (795)
Q Consensus 130 s~~~~~~~~~~~~~~~~~V~V~--~~g~l~ald~~tG~~~W~~~~~~~~~-----~-------------------~~~vv 183 (795)
..+...+ ....++..++. .+|.+...|..+|+....+....... . ...+.
T Consensus 261 -~~~~~~~---~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~ 336 (437)
T 3gre_A 261 -THVEVCQ---FYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTIS 336 (437)
T ss_dssp -EEEEECT---TTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEE
T ss_pred -EEEEecc---ccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEE
Confidence 1111111 11123434443 38899999999999887776432110 0 11121
Q ss_pred EEecCCEEEEEEecCCceeEEEEEEcCCCceeeee
Q 003791 184 QLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHE 218 (795)
Q Consensus 184 ~s~~~~~Vyvv~~~g~~~~~v~ald~~tG~~~w~~ 218 (795)
..++..++.+...+ .+...|..+|+.....
T Consensus 337 --~~~~~~l~s~~~d~---~i~~wd~~~~~~~~~~ 366 (437)
T 3gre_A 337 --VSNDKILLTDEATS---SIVMFSLNELSSSKAV 366 (437)
T ss_dssp --EETTEEEEEEGGGT---EEEEEETTCGGGCEEE
T ss_pred --ECCceEEEecCCCC---eEEEEECCCcccceEE
Confidence 12455444443322 7888999999877554
No 110
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.07 E-value=0.4 Score=50.35 Aligned_cols=196 Identities=10% Similarity=0.127 Sum_probs=98.4
Q ss_pred CCEEEEEeC---CCEEEEEECcCCccceEEEcC-CcceeeeeeeeeCCEEEEEEc-cCCeEEEEeCC-CCcEeEEEeccC
Q 003791 53 RKRVVVSTE---ENVIASLDLRHGEIFWRHVLG-INDVVDGIDIALGKYVITLSS-DGSTLRAWNLP-DGQMVWESFLRG 126 (795)
Q Consensus 53 ~~~v~vat~---~g~l~ALn~~tG~ivWR~~l~-~~~~i~~l~~~~g~~~V~Vs~-~g~~v~A~d~~-tG~llWe~~~~~ 126 (795)
++++|+++. ++.|..+|..+|+..-...+. .......+....++..+++++ .++.++.||.. +|.+..-.....
T Consensus 50 dg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~ 129 (347)
T 3hfq_A 50 KDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQH 129 (347)
T ss_dssp TCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEEC
T ss_pred CCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeec
Confidence 455888876 488999999888743222211 111122332233444555554 56789999984 666543333221
Q ss_pred cccc-------CCceeccccccccCCCeEEEEe--CCEEEEEECC-CCcEEEEE--eccCcceeeeeEEEEecCCEEEEE
Q 003791 127 SKHS-------KPLLLVPTNLKVDKDSLILVSS--KGCLHAVSSI-DGEILWTR--DFAAESVEVQQVIQLDESDQIYVV 194 (795)
Q Consensus 127 ~~~s-------~~~~~~~~~~~~~~~~~V~V~~--~g~l~ald~~-tG~~~W~~--~~~~~~~~~~~vv~s~~~~~Vyvv 194 (795)
.... ..+..+ ....++.+++.. ++.+..++.. +|+..-.. ..+... .+..+..+.++..+|+.
T Consensus 130 ~~~~p~~~~~~~~~~~~----~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~-~p~~~~~spdg~~l~v~ 204 (347)
T 3hfq_A 130 SGHGPRPEQDGSHIHYT----DLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGF-GPRHLVFSPDGQYAFLA 204 (347)
T ss_dssp CCCCSSTTCSSCCEEEE----EECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTC-CEEEEEECTTSSEEEEE
T ss_pred CCCCCCccccCCCceEE----EECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCC-CCceEEECCCCCEEEEE
Confidence 1000 000011 122234466653 6788888887 67654332 222211 23344333344457765
Q ss_pred EecCCceeEEEEEEcCCCceeeeeeeec-cCCccc-----ceEEe-cCcEEEEEECCCCeEEEEEee
Q 003791 195 GYAGSSQFHAYQINAMNGELLNHETAAF-SGGFVG-----DVALV-SSDTLVTLDTTRSILVTVSFK 254 (795)
Q Consensus 195 ~~~g~~~~~v~ald~~tG~~~w~~~v~~-~~~~~~-----~~~~v-g~~~lv~~d~~~~~L~v~~l~ 254 (795)
+.. +..+.++.++..+|+......+.. +.+..+ .+.+- .+..+++.+...+.+.+.++.
T Consensus 205 ~~~-~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~ 270 (347)
T 3hfq_A 205 GEL-SSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVT 270 (347)
T ss_dssp ETT-TTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEEC
T ss_pred eCC-CCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEEC
Confidence 433 345667777776787643333322 222111 12222 334555555556788888886
No 111
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.06 E-value=0.098 Score=53.30 Aligned_cols=182 Identities=7% Similarity=0.049 Sum_probs=97.5
Q ss_pred CCEEEEEeC-CCEEEEEECcCCccceEEEcCCc-ceeeeeeeeeCCEEEEEEc-cCCeEEEEeCCCCcEeEEEeccCccc
Q 003791 53 RKRVVVSTE-ENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIALGKYVITLSS-DGSTLRAWNLPDGQMVWESFLRGSKH 129 (795)
Q Consensus 53 ~~~v~vat~-~g~l~ALn~~tG~ivWR~~l~~~-~~i~~l~~~~g~~~V~Vs~-~g~~v~A~d~~tG~llWe~~~~~~~~ 129 (795)
++++|+++. .+.|..+|+ +|+.. +..+... ..+.++. ...++.++++. .++.++.||. +|+.... ......
T Consensus 109 ~g~l~v~~~~~~~i~~~d~-~g~~~-~~~~~~~~~~~~~i~-~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~-~~~~~~- 182 (299)
T 2z2n_A 109 NGDIWFTEMNGNRIGRITD-DGKIR-EYELPNKGSYPSFIT-LGSDNALWFTENQNNAIGRITE-SGDITEF-KIPTPA- 182 (299)
T ss_dssp TSCEEEEETTTTEEEEECT-TCCEE-EEECSSTTCCEEEEE-ECTTSCEEEEETTTTEEEEECT-TCCEEEE-ECSSTT-
T ss_pred CCCEEEEecCCceEEEECC-CCCEE-EecCCCCCCCCceEE-EcCCCCEEEEeCCCCEEEEEcC-CCcEEEe-eCCCCC-
Confidence 567888874 689999999 88765 2333322 1233331 23344555554 4578999999 8987642 222111
Q ss_pred cCCceeccccccccCCCeEEEEe--CCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEE
Q 003791 130 SKPLLLVPTNLKVDKDSLILVSS--KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQI 207 (795)
Q Consensus 130 s~~~~~~~~~~~~~~~~~V~V~~--~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~al 207 (795)
..+..+ ..+.++.+++.. ++.|.++|. +|+..- +..+.....+..+. ...++.+|+.....+ .+..+
T Consensus 183 -~~~~~i----~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~-~~~~g~l~v~~~~~~---~i~~~ 251 (299)
T 2z2n_A 183 -SGPVGI----TKGNDDALWFVEIIGNKIGRITT-SGEITE-FKIPTPNARPHAIT-AGAGIDLWFTEWGAN---KIGRL 251 (299)
T ss_dssp -CCEEEE----EECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEE-ECSTTCEEEEETTTT---EEEEE
T ss_pred -CcceeE----EECCCCCEEEEccCCceEEEECC-CCcEEE-EECCCCCCCceeEE-ECCCCCEEEeccCCc---eEEEE
Confidence 111111 334456788875 789999999 888542 33332222244443 234567888654433 68899
Q ss_pred EcCCCceeeeeeeeccCCccc--ceEEecCcEEEEEECCCCeEEEEEeecCe
Q 003791 208 NAMNGELLNHETAAFSGGFVG--DVALVSSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 208 d~~tG~~~w~~~v~~~~~~~~--~~~~vg~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
|+ +|+.. ... .+..... .+.+ .++.+...+. .+.+..++..+++
T Consensus 252 d~-~g~~~-~~~--~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 252 TS-NNIIE-EYP--IQIKSAEPHGICF-DGETIWFAME-CDKIGKLTLIKDN 297 (299)
T ss_dssp ET-TTEEE-EEE--CSSSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC---
T ss_pred CC-CCceE-EEe--CCCCCCccceEEe-cCCCEEEEec-CCcEEEEEcCccc
Confidence 98 67532 222 2222211 2222 3344433433 4667777766554
No 112
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=97.06 E-value=0.5 Score=51.29 Aligned_cols=200 Identities=11% Similarity=0.041 Sum_probs=107.7
Q ss_pred CCCEEEEEeCCCEEEEEECcC---Cccc-eEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCC---CCcEeEEEec
Q 003791 52 GRKRVVVSTEENVIASLDLRH---GEIF-WRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLP---DGQMVWESFL 124 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~t---G~iv-WR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~---tG~llWe~~~ 124 (795)
+++.+++++.+|.|.-.|..+ |... =+..+.....+..+.....+..++.++.++.++.||.. +|+..-....
T Consensus 75 ~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~ 154 (437)
T 3gre_A 75 ETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNC 154 (437)
T ss_dssp SSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEE
T ss_pred CCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeecccc
Confidence 356799999999999999888 6511 01222222334444333344455556667899999994 7765543332
Q ss_pred c--------CccccCCceeccccccccCCCeEEE-E-eCCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEE
Q 003791 125 R--------GSKHSKPLLLVPTNLKVDKDSLILV-S-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVV 194 (795)
Q Consensus 125 ~--------~~~~s~~~~~~~~~~~~~~~~~V~V-~-~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv 194 (795)
. ..........+. .....++..++ . .+|.+...|..+|+..++...+........+..+..+..++..
T Consensus 155 ~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 232 (437)
T 3gre_A 155 ECIRKINLKNFGKNEYAVRMR--AFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILG 232 (437)
T ss_dssp EEEEEEEGGGGSSCCCEEEEE--EEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEE
T ss_pred ceeEEEEccCcccccCceEEE--EEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEE
Confidence 1 100000000000 00111344444 3 3899999999999999998763111112223222234445544
Q ss_pred EecCCceeEEEEEEcCCCceeeeeeeeccCCcccceE---EecCcEEEEEECCCCeEEEEEeecCe
Q 003791 195 GYAGSSQFHAYQINAMNGELLNHETAAFSGGFVGDVA---LVSSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 195 ~~~g~~~~~v~ald~~tG~~~w~~~v~~~~~~~~~~~---~vg~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
+.+| .+..+|..+|+.+..........+..-+. +-.++.+++.-...+.+++-|+.+++
T Consensus 233 ~~dg----~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 294 (437)
T 3gre_A 233 TTRG----IIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGH 294 (437)
T ss_dssp ETTS----CEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTE
T ss_pred cCCC----eEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCc
Confidence 4444 68889999998887654322211111000 00123233343456789999998877
No 113
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.05 E-value=0.019 Score=61.77 Aligned_cols=195 Identities=12% Similarity=0.086 Sum_probs=96.6
Q ss_pred cCCCEEEEEeC------CCEEEEEECcCCccceEEEcC---CcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEE
Q 003791 51 TGRKRVVVSTE------ENVIASLDLRHGEIFWRHVLG---INDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWE 121 (795)
Q Consensus 51 ~~~~~v~vat~------~g~l~ALn~~tG~ivWR~~l~---~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe 121 (795)
+++..|..++. ++.+.-.+..+|+........ ....+..+.....+.+++ ++.++.|+.||..+|+....
T Consensus 52 pDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~-~s~dg~v~lWd~~~~~~~~~ 130 (357)
T 4g56_B 52 RDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILV-ASDSGAVELWEILEKESLLV 130 (357)
T ss_dssp SSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEE-EETTSCEEEC--------CC
T ss_pred CCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEE-EECCCEEEEeeccccceeEE
Confidence 34556777776 567888888888765543221 111233332222344444 55567899999999986543
Q ss_pred EeccCccccCCceeccccccccCCC-eEEEE-eCCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEE-ecC
Q 003791 122 SFLRGSKHSKPLLLVPTNLKVDKDS-LILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVG-YAG 198 (795)
Q Consensus 122 ~~~~~~~~s~~~~~~~~~~~~~~~~-~V~V~-~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~-~~g 198 (795)
..............+ ....++ .++.. .++.+...|..+|+.+..++...... ..+..+..++.+++.+ .+|
T Consensus 131 ~~~~~~~h~~~V~~v----~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v--~~v~~s~~~~~~~~s~~~dg 204 (357)
T 4g56_B 131 NKFAKYEHDDIVKTL----SVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEV--NCVAACPGKDTIFLSCGEDG 204 (357)
T ss_dssp CCEEECCCSSCEEEE----EECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE--EEEEECTTCSSCEEEEETTS
T ss_pred EeeccCCCCCCEEEE----EECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCE--EEEEEccCCCceeeeeccCC
Confidence 322111000111111 111234 34444 48999999999999998886544332 2222122333344433 344
Q ss_pred CceeEEEEEEcCCCceeeeeeeeccCCcccceEEe--cCcEEEEEECCCCeEEEEEeecCe
Q 003791 199 SSQFHAYQINAMNGELLNHETAAFSGGFVGDVALV--SSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 199 ~~~~~v~ald~~tG~~~w~~~v~~~~~~~~~~~~v--g~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
.+...|..+|+................+.+- ++.++++.+ ..+.+++.|+.+++
T Consensus 205 ----~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~-~d~~i~~wd~~~~~ 260 (357)
T 4g56_B 205 ----RILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGD-ETGNVSLVNIKNPD 260 (357)
T ss_dssp ----CEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEE-SSSCEEEEESSCGG
T ss_pred ----ceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEee-cccceeEEECCCCc
Confidence 5777899999877655322221111112221 344666665 35788999988876
No 114
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.04 E-value=0.04 Score=57.82 Aligned_cols=106 Identities=10% Similarity=0.036 Sum_probs=68.5
Q ss_pred CEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeee-CCEEEEEEccCCeEEEEeCCCCcEeEEEe---ccCccc
Q 003791 54 KRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIAL-GKYVITLSSDGSTLRAWNLPDGQMVWESF---LRGSKH 129 (795)
Q Consensus 54 ~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~-g~~~V~Vs~~g~~v~A~d~~tG~llWe~~---~~~~~~ 129 (795)
..+++++.+|.|...|..+|+.+....-. ...+..+.... ++..++.++.++.|+.||..+|+.+.... ......
T Consensus 86 ~~l~~~~~dg~i~v~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v 164 (366)
T 3k26_A 86 PLLAVAGSRGIIRIINPITMQCIKHYVGH-GNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEV 164 (366)
T ss_dssp EEEEEEETTCEEEEECTTTCCEEEEEESC-CSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCE
T ss_pred CEEEEecCCCEEEEEEchhceEeeeecCC-CCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCce
Confidence 46888999999999999999998876632 22344443222 44455556667799999999999988873 222111
Q ss_pred cCCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEE
Q 003791 130 SKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEIL 167 (795)
Q Consensus 130 s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~ 167 (795)
..+.+.+ + .+.++.. .+|.+...|..+|+..
T Consensus 165 -~~~~~~~-----~-~~~l~~~~~dg~i~i~d~~~~~~~ 196 (366)
T 3k26_A 165 -LSADYDL-----L-GEKIMSCGMDHSLKLWRINSKRMM 196 (366)
T ss_dssp -EEEEECT-----T-SSEEEEEETTSCEEEEESCSHHHH
T ss_pred -eEEEECC-----C-CCEEEEecCCCCEEEEECCCCccc
Confidence 1111111 1 2344444 3889999998887644
No 115
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.04 E-value=0.054 Score=58.03 Aligned_cols=155 Identities=9% Similarity=0.008 Sum_probs=92.3
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeee-e-CCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccc
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIA-L-GKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKH 129 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~-~-g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~ 129 (795)
++..+++++.++.|.-.|.++|+.+-...-... .+..+... . .+..++.++.++.++.||..+|+.+-.........
T Consensus 165 ~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~-~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v 243 (354)
T 2pbi_B 165 SDMQILTASGDGTCALWDVESGQLLQSFHGHGA-DVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDV 243 (354)
T ss_dssp SSSEEEEEETTSEEEEEETTTCCEEEEEECCSS-CEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCE
T ss_pred CCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCC-CeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCe
Confidence 456799999999999999999987655432222 23322111 1 23455546667899999999999887766544322
Q ss_pred cCCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEE
Q 003791 130 SKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQIN 208 (795)
Q Consensus 130 s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald 208 (795)
....+.+ + .+.++.. .++.+...|..+++..-.+...........+..+..+..++..+.++ .+..+|
T Consensus 244 -~~v~~~p-----~-~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~----~i~vwd 312 (354)
T 2pbi_B 244 -NSVRYYP-----S-GDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDY----TINVWD 312 (354)
T ss_dssp -EEEEECT-----T-SSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTS----CEEEEE
T ss_pred -EEEEEeC-----C-CCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCC----cEEEEE
Confidence 1111222 1 2334444 38999999999988765554332211122222222344444433344 688889
Q ss_pred cCCCceeeee
Q 003791 209 AMNGELLNHE 218 (795)
Q Consensus 209 ~~tG~~~w~~ 218 (795)
..+|+.+...
T Consensus 313 ~~~~~~~~~l 322 (354)
T 2pbi_B 313 VLKGSRVSIL 322 (354)
T ss_dssp TTTCSEEEEE
T ss_pred CCCCceEEEE
Confidence 9999876543
No 116
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=97.03 E-value=0.45 Score=51.23 Aligned_cols=112 Identities=13% Similarity=0.140 Sum_probs=72.2
Q ss_pred CCCEEEEEeC------CCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEc----------cCCeEEEEeCCC
Q 003791 52 GRKRVVVSTE------ENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSS----------DGSTLRAWNLPD 115 (795)
Q Consensus 52 ~~~~v~vat~------~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~----------~g~~v~A~d~~t 115 (795)
+.+++|++.. ++.|+.+|+++|+++=+...... . ++.+..++..+|++. .++.|..||+.+
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~--p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t 90 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFN--G-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADK 90 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEE--E-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTT
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCC--C-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcC
Confidence 4567999874 57999999999998755443321 2 443334556777764 135799999999
Q ss_pred CcEeEEEeccCcccc--CCceeccccccccCCCeEEEEe---CCEEEEEECCCCcEEEE
Q 003791 116 GQMVWESFLRGSKHS--KPLLLVPTNLKVDKDSLILVSS---KGCLHAVSSIDGEILWT 169 (795)
Q Consensus 116 G~llWe~~~~~~~~s--~~~~~~~~~~~~~~~~~V~V~~---~g~l~ald~~tG~~~W~ 169 (795)
++++-+..+...... ..+.-+. ...+ ++.+++.. ++.+..+|.++++++-+
T Consensus 91 ~~~~~~i~~~~~~~~~g~~p~~i~--~spd-g~~l~v~n~~~~~~v~v~d~~~~~~~~~ 146 (361)
T 2oiz_A 91 LTFEKEISLPPKRVQGLNYDGLFR--QTTD-GKFIVLQNASPATSIGIVDVAKGDYVED 146 (361)
T ss_dssp CCEEEEEEECTTBCCBCCCGGGEE--ECTT-SSEEEEEEESSSEEEEEEETTTTEEEEE
T ss_pred CcEEEEEEcCccccccCCCcceEE--ECCC-CCEEEEECCCCCCeEEEEECCCCcEEEE
Confidence 999988876422110 0011110 0122 45777763 57899999999988755
No 117
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.99 E-value=0.025 Score=60.76 Aligned_cols=153 Identities=10% Similarity=0.067 Sum_probs=89.3
Q ss_pred cCCCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeee-eCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccc
Q 003791 51 TGRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIA-LGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKH 129 (795)
Q Consensus 51 ~~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~-~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~ 129 (795)
++++.|+.++.++.|.-.|.++|+.+-...- ....+..+... .+..+++.++.++.|+.||..+|+..-+........
T Consensus 137 pdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~-h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~ 215 (344)
T 4gqb_B 137 SSGTQAVSGSKDICIKVWDLAQQVVLSSYRA-HAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGY 215 (344)
T ss_dssp TTSSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CC
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEEcC-cCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeec
Confidence 3467799999999999999999998765432 12234433222 233344435556799999999999887654432211
Q ss_pred cCCceeccccccccCCCeEEE-E-eCCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEE-EEecCCceeEEEE
Q 003791 130 SKPLLLVPTNLKVDKDSLILV-S-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYV-VGYAGSSQFHAYQ 206 (795)
Q Consensus 130 s~~~~~~~~~~~~~~~~~V~V-~-~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyv-v~~~g~~~~~v~a 206 (795)
....+.. ... ++.+++ . .+|.|...|..+|+.+.++....... ..+..+..+..+++ .+.++ .+..
T Consensus 216 --~~~~~~~--~p~-~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v--~~v~fsp~g~~~lasgs~D~----~i~v 284 (344)
T 4gqb_B 216 --LPTSLAW--HPQ-QSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCV--TGLVFSPHSVPFLASLSEDC----SLAV 284 (344)
T ss_dssp --CEEEEEE--CSS-CTTEEEEEETTSEEEEEESCC--CCEEEECCSSCE--EEEEECSSSSCCEEEEETTS----CEEE
T ss_pred --cceeeee--cCC-CCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCE--EEEEEccCCCeEEEEEeCCC----eEEE
Confidence 1111110 112 334444 4 38999999999999988876544332 22322223334443 33444 5777
Q ss_pred EEcCCCcee
Q 003791 207 INAMNGELL 215 (795)
Q Consensus 207 ld~~tG~~~ 215 (795)
+|..+|+.+
T Consensus 285 wd~~~~~~~ 293 (344)
T 4gqb_B 285 LDSSLSELF 293 (344)
T ss_dssp ECTTCCEEE
T ss_pred EECCCCcEE
Confidence 899999865
No 118
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.98 E-value=0.19 Score=52.13 Aligned_cols=188 Identities=9% Similarity=0.034 Sum_probs=107.7
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcCC-cceeeeeeee-eCCE-EEEEEccCCeEEEEeCCCCcEeEEEeccCcc
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGI-NDVVDGIDIA-LGKY-VITLSSDGSTLRAWNLPDGQMVWESFLRGSK 128 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~-~~~i~~l~~~-~g~~-~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~ 128 (795)
..+.++.++.++.+...|...+... ...+.. ...+...... .+.. .++.++.++.++.||..+|+++.........
T Consensus 139 ~~~~l~s~s~d~~~~~~d~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~ 217 (340)
T 4aow_A 139 DNRQIVSGSRDKTIKLWNTLGVCKY-TVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGY 217 (340)
T ss_dssp TSSCEEEEETTSCEEEECTTSCEEE-EECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSC
T ss_pred cCccceeecCCCeEEEEEeCCCceE-EEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCc
Confidence 3566888999999999988665443 222222 2222222111 2223 3333455679999999999998877654433
Q ss_pred ccCCceeccccccccCCCeEE-EE-eCCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEE
Q 003791 129 HSKPLLLVPTNLKVDKDSLIL-VS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQ 206 (795)
Q Consensus 129 ~s~~~~~~~~~~~~~~~~~V~-V~-~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~a 206 (795)
. ..+.+- .++..+ .. .+|.+...|..+++.+.......... .+. ...++.+++.+.++ .+..
T Consensus 218 v-~~~~~s-------~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~---~~~-~~~~~~~~~~~~d~----~i~i 281 (340)
T 4aow_A 218 L-NTVTVS-------PDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIIN---ALC-FSPNRYWLCAATGP----SIKI 281 (340)
T ss_dssp E-EEEEEC-------TTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEE---EEE-ECSSSSEEEEEETT----EEEE
T ss_pred E-EEEEEC-------CCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEE---eee-cCCCCceeeccCCC----EEEE
Confidence 2 111121 134344 44 48999999999999988876554321 221 12344555555554 6788
Q ss_pred EEcCCCceeeeeeeecc----CCcccc---eEEe-cCcEEEEEECCCCeEEEEEeecCe
Q 003791 207 INAMNGELLNHETAAFS----GGFVGD---VALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 207 ld~~tG~~~w~~~v~~~----~~~~~~---~~~v-g~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
+|..++..+++..-... ..-... +.+- .+.++++.. ..|.+++-++.+|+
T Consensus 282 wd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs-~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 282 WDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGY-TDNLVRVWQVTIGT 339 (340)
T ss_dssp EETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEE-TTSCEEEEEEEC--
T ss_pred EECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEe-CCCEEEEEeCCCcC
Confidence 89999988776542211 011111 1121 345666665 35889888888885
No 119
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=96.98 E-value=0.42 Score=50.41 Aligned_cols=188 Identities=11% Similarity=0.032 Sum_probs=100.1
Q ss_pred CEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeee--CCEEEEEEccCCeEEEEeCCCCcEeEEEeccCc-ccc
Q 003791 54 KRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIAL--GKYVITLSSDGSTLRAWNLPDGQMVWESFLRGS-KHS 130 (795)
Q Consensus 54 ~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~--g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~-~~s 130 (795)
+.+.+-+.++.+...|.++++++.++.....+.+..+.... .+..++.++.++.++.||..+|+.......... ..
T Consensus 95 ~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i- 173 (343)
T 3lrv_A 95 NRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEY- 173 (343)
T ss_dssp TEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCC-
T ss_pred CeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCce-
Confidence 33444444444455577788877777766544454442222 344444455567999999999999655533322 11
Q ss_pred CCceeccccccccCCCeEEEE--eCCEEEEEECCCCcEE-EEEec-cCcceeeeeEEEEecCCEEEEEEecCCceeEEEE
Q 003791 131 KPLLLVPTNLKVDKDSLILVS--SKGCLHAVSSIDGEIL-WTRDF-AAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQ 206 (795)
Q Consensus 131 ~~~~~~~~~~~~~~~~~V~V~--~~g~l~ald~~tG~~~-W~~~~-~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~a 206 (795)
....+ ..++.+++. .+|.+...|..+|+.. -++.. .... ...+..+ .++..++.+.++ .+..
T Consensus 174 ~~~~~-------~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~--v~~l~fs-~~g~~l~s~~~~----~v~i 239 (343)
T 3lrv_A 174 SSGVL-------HKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAK--IKEVKFA-DNGYWMVVECDQ----TVVC 239 (343)
T ss_dssp CEEEE-------CTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSC--EEEEEEC-TTSSEEEEEESS----BEEE
T ss_pred EEEEE-------CCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCC--EEEEEEe-CCCCEEEEEeCC----eEEE
Confidence 11112 224445553 4899999999999866 55544 1211 2223222 233344334444 5788
Q ss_pred EEcCCCceeeeeeeec-c-CCcccceEEe--cCcEEEEEECCCCeEEEEEeecC
Q 003791 207 INAMNGELLNHETAAF-S-GGFVGDVALV--SSDTLVTLDTTRSILVTVSFKNR 256 (795)
Q Consensus 207 ld~~tG~~~w~~~v~~-~-~~~~~~~~~v--g~~~lv~~d~~~~~L~v~~l~sg 256 (795)
.|+.+++.......-. . ..+...++-. .+.++++.....+.+.+.++.++
T Consensus 240 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 240 FDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKK 293 (343)
T ss_dssp EETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred EEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEccc
Confidence 8999887764432100 0 1111111222 34466655543577888887654
No 120
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.96 E-value=0.22 Score=52.27 Aligned_cols=193 Identities=11% Similarity=0.060 Sum_probs=102.2
Q ss_pred CCCEEEEEeCCCEEEEEECcCCc--cceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccc
Q 003791 52 GRKRVVVSTEENVIASLDLRHGE--IFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKH 129 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~--ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~ 129 (795)
+++.+++++.+|.|.-.|..+|+ .+.+..- ....+..+.....+..++.++.++.++.||..+|+..-........
T Consensus 19 ~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~- 96 (372)
T 1k8k_C 19 DRTQIAICPNNHEVHIYEKSGNKWVQVHELKE-HNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRIN- 96 (372)
T ss_dssp TSSEEEEECSSSEEEEEEEETTEEEEEEEEEC-CSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCS-
T ss_pred CCCEEEEEeCCCEEEEEeCCCCcEEeeeeecC-CCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCC-
Confidence 45678888899999999999997 4444432 2223444433333445554556679999999999866665443221
Q ss_pred cCCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEecc-Cc-ceeeeeEEEEecCCEEEEEEecCCceeEEEE
Q 003791 130 SKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFA-AE-SVEVQQVIQLDESDQIYVVGYAGSSQFHAYQ 206 (795)
Q Consensus 130 s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~-~~-~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~a 206 (795)
.....+.. ..+ +..+++. .+|.+...|..+++..|..... .+ ......+.....+..++..+.+| .+..
T Consensus 97 -~~v~~~~~--~~~-~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg----~i~~ 168 (372)
T 1k8k_C 97 -RAARCVRW--APN-EKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDF----KCRI 168 (372)
T ss_dssp -SCEEEEEE--CTT-SSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTS----CEEE
T ss_pred -CceeEEEE--CCC-CCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCC----CEEE
Confidence 11111110 111 2344444 3778888777777654433221 11 11122222122333444433344 5677
Q ss_pred EEc------------------CCCceeeeeeeeccCCcccceEEe-cCcEEEEEECCCCeEEEEEeecCe
Q 003791 207 INA------------------MNGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 207 ld~------------------~tG~~~w~~~v~~~~~~~~~~~~v-g~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
+|. .+|+.+..... ....+. .+.+- .++.+++.. ..+.+.+.++.+++
T Consensus 169 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~-~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~ 235 (372)
T 1k8k_C 169 FSAYIKEVEERPAPTPWGSKMPFGELMFESSS-SCGWVH-GVCFSANGSRVAWVS-HDSTVCLADADKKM 235 (372)
T ss_dssp EECCCTTTSCCCCCBTTBSCCCTTCEEEECCC-CSSCEE-EEEECSSSSEEEEEE-TTTEEEEEEGGGTT
T ss_pred EEcccccccccccccccccccchhhheEecCC-CCCeEE-EEEECCCCCEEEEEe-CCCEEEEEECCCCc
Confidence 774 35665544421 011111 11221 344666665 46889999998877
No 121
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.95 E-value=0.2 Score=52.71 Aligned_cols=190 Identities=11% Similarity=0.053 Sum_probs=108.3
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcCCc-ceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCcccc
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHS 130 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~-~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s 130 (795)
+++.+++++.+|.|...|.++|+..-...+... ..+..+.....+..+++++.++.++.||..++...|..........
T Consensus 63 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~ 142 (372)
T 1k8k_C 63 DSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIR 142 (372)
T ss_dssp TTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCC
T ss_pred CCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccC
Confidence 466799999999999999999986666554332 2343332223444555566667999999999886554432211110
Q ss_pred CCceeccccccccCCC-eEEEEe-CCEEEEEEC------------------CCCcEEEEEeccCcceeeeeEEEEecCCE
Q 003791 131 KPLLLVPTNLKVDKDS-LILVSS-KGCLHAVSS------------------IDGEILWTRDFAAESVEVQQVIQLDESDQ 190 (795)
Q Consensus 131 ~~~~~~~~~~~~~~~~-~V~V~~-~g~l~ald~------------------~tG~~~W~~~~~~~~~~~~~vv~s~~~~~ 190 (795)
.....+ ....++ .+++.+ +|.+..+|. .+|+..-.+...... ...+..+..+..
T Consensus 143 ~~i~~~----~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~ 216 (372)
T 1k8k_C 143 STVLSL----DWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGW--VHGVCFSANGSR 216 (372)
T ss_dssp SCEEEE----EECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSC--EEEEEECSSSSE
T ss_pred CCeeEE----EEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCe--EEEEEECCCCCE
Confidence 111111 112133 344443 888888883 467777666433222 222322234445
Q ss_pred EEEEEecCCceeEEEEEEcCCCceeeeeeeeccCCcccceEEe-cCcEEEEEECCCCeEEEEEeec
Q 003791 191 IYVVGYAGSSQFHAYQINAMNGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKN 255 (795)
Q Consensus 191 Vyvv~~~g~~~~~v~ald~~tG~~~w~~~v~~~~~~~~~~~~v-g~~~lv~~d~~~~~L~v~~l~s 255 (795)
++..+.+| .+..+|..+|+.+...... ...+.. +.+. .+.++++. ..+.+++.++.+
T Consensus 217 l~~~~~d~----~i~i~d~~~~~~~~~~~~~-~~~v~~-~~~~~~~~~l~~~--~d~~i~i~~~~~ 274 (372)
T 1k8k_C 217 VAWVSHDS----TVCLADADKKMAVATLASE-TLPLLA-VTFITESSLVAAG--HDCFPVLFTYDS 274 (372)
T ss_dssp EEEEETTT----EEEEEEGGGTTEEEEEECS-SCCEEE-EEEEETTEEEEEE--TTSSCEEEEEET
T ss_pred EEEEeCCC----EEEEEECCCCceeEEEccC-CCCeEE-EEEecCCCEEEEE--eCCeEEEEEccC
Confidence 55555444 7889999999988766421 112221 2222 33344444 467888888877
No 122
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=96.93 E-value=0.41 Score=50.10 Aligned_cols=192 Identities=16% Similarity=0.156 Sum_probs=104.4
Q ss_pred cCCCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCcccc
Q 003791 51 TGRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHS 130 (795)
Q Consensus 51 ~~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s 130 (795)
+++..++.++.++.|.-.|.++|+.+-+..-- ...+..+.....+..++.++.++.++.||.. |..+-.........
T Consensus 75 ~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v- 151 (319)
T 3frx_A 75 ADGAYALSASWDKTLRLWDVATGETYQRFVGH-KSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWV- 151 (319)
T ss_dssp TTSSEEEEEETTSEEEEEETTTTEEEEEEECC-SSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCE-
T ss_pred CCCCEEEEEeCCCEEEEEECCCCCeeEEEccC-CCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcE-
Confidence 34667999999999999999999876554322 2234444222334455545667899999986 55544443332221
Q ss_pred CCceeccccccccCCCeEEE-E-eCCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEE
Q 003791 131 KPLLLVPTNLKVDKDSLILV-S-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQIN 208 (795)
Q Consensus 131 ~~~~~~~~~~~~~~~~~V~V-~-~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald 208 (795)
....+.+.. ....++..++ . .++.+...|..+++..-.+...... ...+..+..+..+...+.+| .+...|
T Consensus 152 ~~~~~~~~~-~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~--v~~~~~sp~g~~l~s~~~dg----~i~iwd 224 (319)
T 3frx_A 152 SQVRVVPNE-KADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSN--INTLTASPDGTLIASAGKDG----EIMLWN 224 (319)
T ss_dssp EEEEECCC-------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSC--EEEEEECTTSSEEEEEETTC----EEEEEE
T ss_pred EEEEEccCC-CCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCc--EEEEEEcCCCCEEEEEeCCC----eEEEEE
Confidence 111122200 0011222333 3 3889999999988876655433222 22232222333444433344 788899
Q ss_pred cCCCceeeeeeeeccCCcccceEEe-cCcEEEEEECCCCeEEEEEeecCe
Q 003791 209 AMNGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 209 ~~tG~~~w~~~v~~~~~~~~~~~~v-g~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
..+++.+.+... ...+.. +.+- .+..+++.. .+.+.+.++..+.
T Consensus 225 ~~~~~~~~~~~~--~~~v~~-~~~sp~~~~la~~~--~~~i~v~~~~~~~ 269 (319)
T 3frx_A 225 LAAKKAMYTLSA--QDEVFS-LAFSPNRYWLAAAT--ATGIKVFSLDPQY 269 (319)
T ss_dssp TTTTEEEEEEEC--CSCEEE-EEECSSSSEEEEEE--TTEEEEEEETTEE
T ss_pred CCCCcEEEEecC--CCcEEE-EEEcCCCCEEEEEc--CCCcEEEEeCcCe
Confidence 999998876632 222211 2221 334555554 2457777776554
No 123
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=96.90 E-value=0.16 Score=54.78 Aligned_cols=72 Identities=13% Similarity=0.084 Sum_probs=51.3
Q ss_pred ccCCCEEEEEeC----------CCEEEEEECcCCccceEEEcCCcc-----eeeeeeeeeCCEEEEEEcc--CCeEEEEe
Q 003791 50 KTGRKRVVVSTE----------ENVIASLDLRHGEIFWRHVLGIND-----VVDGIDIALGKYVITLSSD--GSTLRAWN 112 (795)
Q Consensus 50 ~~~~~~v~vat~----------~g~l~ALn~~tG~ivWR~~l~~~~-----~i~~l~~~~g~~~V~Vs~~--g~~v~A~d 112 (795)
+++++.+|++++ ++.|..+|+++++++-+..+.... ....+.+..++..+|++.. ++.|..||
T Consensus 58 spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d 137 (361)
T 2oiz_A 58 SNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVD 137 (361)
T ss_dssp CTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEE
T ss_pred CCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEE
Confidence 346778999974 577999999999999888765321 1123323335567777653 46899999
Q ss_pred CCCCcEeEE
Q 003791 113 LPDGQMVWE 121 (795)
Q Consensus 113 ~~tG~llWe 121 (795)
..+|+++-+
T Consensus 138 ~~~~~~~~~ 146 (361)
T 2oiz_A 138 VAKGDYVED 146 (361)
T ss_dssp TTTTEEEEE
T ss_pred CCCCcEEEE
Confidence 999998766
No 124
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=96.90 E-value=0.068 Score=56.97 Aligned_cols=195 Identities=11% Similarity=0.027 Sum_probs=104.7
Q ss_pred CCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeee-eCCEEEEEEccCCeEEEEeCCCCcE-eEEEeccCccc-
Q 003791 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIA-LGKYVITLSSDGSTLRAWNLPDGQM-VWESFLRGSKH- 129 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~-~g~~~V~Vs~~g~~v~A~d~~tG~l-lWe~~~~~~~~- 129 (795)
...+++++.+|.|...|.++|+.+........ .+..+... .++.+++.++.++.++.||..++.. +..........
T Consensus 156 ~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 234 (408)
T 4a11_B 156 HCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQ-EILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKS 234 (408)
T ss_dssp CCEEEEEESSSSEEEEESSSSCCCEEECCCCS-CEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSC
T ss_pred CcEEEEEcCCCeEEEEeCCCcceeeeecCCCC-cEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccc
Confidence 44789999999999999999998877653222 34444222 2333555566677999999998873 33322111000
Q ss_pred --------cCCceeccccccccCCC-eEEEE-eCCEEEEEECCCCcEEEEEeccCcce--eeeeEEEE-ecCCEEEEEEe
Q 003791 130 --------SKPLLLVPTNLKVDKDS-LILVS-SKGCLHAVSSIDGEILWTRDFAAESV--EVQQVIQL-DESDQIYVVGY 196 (795)
Q Consensus 130 --------s~~~~~~~~~~~~~~~~-~V~V~-~~g~l~ald~~tG~~~W~~~~~~~~~--~~~~vv~s-~~~~~Vyvv~~ 196 (795)
.....+... ....++ .+++. .+|.+...|..+|+............ ........ ...+.+.+.+.
T Consensus 235 ~~~~~~~~~~~~~v~~~--~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (408)
T 4a11_B 235 QAVESANTAHNGKVNGL--CFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPY 312 (408)
T ss_dssp CCTTTSSCSCSSCEEEE--EECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEE
T ss_pred eeeccccccccCceeEE--EEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEec
Confidence 000001100 111123 34444 38888888888887654332211100 00011111 12334444444
Q ss_pred cCCceeEEEEEEcCCCceeeeeeeeccCCcccceEEe-cCcEEEEEECCCCeEEEEEeecCe
Q 003791 197 AGSSQFHAYQINAMNGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 197 ~g~~~~~v~ald~~tG~~~w~~~v~~~~~~~~~~~~v-g~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
.+ .+..+|..+|+.+...... ...+.. +.+- .+..++... ..|.+++-++.+++
T Consensus 313 ~~----~i~v~d~~~~~~~~~~~~~-~~~v~~-~~~s~~~~~l~s~~-~dg~i~iw~~~~~~ 367 (408)
T 4a11_B 313 GS----TIAVYTVYSGEQITMLKGH-YKTVDC-CVFQSNFQELYSGS-RDCNILAWVPSLYE 367 (408)
T ss_dssp TT----EEEEEETTTCCEEEEECCC-SSCEEE-EEEETTTTEEEEEE-TTSCEEEEEECC--
T ss_pred CC----EEEEEECcCCcceeeeccC-CCeEEE-EEEcCCCCEEEEEC-CCCeEEEEeCCCCC
Confidence 44 7889999999988766311 112221 2222 345666665 45889999988876
No 125
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=96.87 E-value=0.13 Score=53.82 Aligned_cols=185 Identities=6% Similarity=-0.066 Sum_probs=106.8
Q ss_pred CEEEEEeCCCEEEEEECcC-CccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccCC
Q 003791 54 KRVVVSTEENVIASLDLRH-GEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKP 132 (795)
Q Consensus 54 ~~v~vat~~g~l~ALn~~t-G~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~~ 132 (795)
+.+++++.+|.|.-.|.++ |+..-+........+..+.....+..++.++.++.|+.||..+|+.+.......+.. .
T Consensus 55 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~--~ 132 (368)
T 3mmy_A 55 NFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVK--T 132 (368)
T ss_dssp EEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEE--E
T ss_pred eEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeeccccCceE--E
Confidence 5688899999999999998 554423332223334444323344455556667799999999999887655443322 1
Q ss_pred ceeccccccccCCCeEEE-E-eCCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcC
Q 003791 133 LLLVPTNLKVDKDSLILV-S-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAM 210 (795)
Q Consensus 133 ~~~~~~~~~~~~~~~V~V-~-~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~ 210 (795)
+.+.+ ..++..++ . .+|.+...|..+|+.......+.... .+ ......+++.+..+ .+..+|..
T Consensus 133 ~~~~~-----~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~----~i~~~~~~ 198 (368)
T 3mmy_A 133 IHWIK-----APNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCY---CA--DVIYPMAVVATAER----GLIVYQLE 198 (368)
T ss_dssp EEEEE-----CSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEE---EE--EEETTEEEEEEGGG----CEEEEECS
T ss_pred EEEEe-----CCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCce---EE--EecCCeeEEEeCCC----cEEEEEec
Confidence 22211 22444444 4 38999999999999998887765322 11 23455566555444 57777877
Q ss_pred CCceeeeeeeeccCCcccceEE--ecCc----EEEEEECCCCeEEEEEeecC
Q 003791 211 NGELLNHETAAFSGGFVGDVAL--VSSD----TLVTLDTTRSILVTVSFKNR 256 (795)
Q Consensus 211 tG~~~w~~~v~~~~~~~~~~~~--vg~~----~lv~~d~~~~~L~v~~l~sg 256 (795)
++...+.... .+......++- .... .+++.. ..+.+.+.++..+
T Consensus 199 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dg~i~i~~~~~~ 248 (368)
T 3mmy_A 199 NQPSEFRRIE-SPLKHQHRCVAIFKDKQNKPTGFALGS-IEGRVAIHYINPP 248 (368)
T ss_dssp SSCEEEEECC-CSCSSCEEEEEEEECTTSCEEEEEEEE-TTSEEEEEESSCS
T ss_pred cccchhhhcc-ccccCCCceEEEcccCCCCCCeEEEec-CCCcEEEEecCCC
Confidence 7665544421 11111111211 1111 144443 4578888887765
No 126
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=96.83 E-value=0.13 Score=55.77 Aligned_cols=151 Identities=15% Similarity=0.114 Sum_probs=84.8
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccC
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~ 131 (795)
+++.+++++.++.|...|.++|+.+-...- ....+..+.....+..++.++.++.++.||..+|+............
T Consensus 134 dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~-- 210 (393)
T 1erj_A 134 DGKFLATGAEDRLIRIWDIENRKIVMILQG-HEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVT-- 210 (393)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEE--
T ss_pred CCCEEEEEcCCCeEEEEECCCCcEEEEEcc-CCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcE--
Confidence 466789999999999999999987644321 12234433222233344445566899999999999988877554322
Q ss_pred CceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEeccCc-----ceeeeeEEEEecCCEEEEEEecCCceeEEE
Q 003791 132 PLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAE-----SVEVQQVIQLDESDQIYVVGYAGSSQFHAY 205 (795)
Q Consensus 132 ~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~~-----~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ 205 (795)
...+. ......++.. .+|.+...|..+|+..-+...... ......+..+..+..++..+.+| .+.
T Consensus 211 ~~~~~-----~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~----~v~ 281 (393)
T 1erj_A 211 TVAVS-----PGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDR----SVK 281 (393)
T ss_dssp EEEEC-----STTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTS----EEE
T ss_pred EEEEE-----CCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCC----EEE
Confidence 11111 1112344444 389999999999988766532211 11122232222334444433344 677
Q ss_pred EEEcCCCce
Q 003791 206 QINAMNGEL 214 (795)
Q Consensus 206 ald~~tG~~ 214 (795)
..|..++..
T Consensus 282 ~wd~~~~~~ 290 (393)
T 1erj_A 282 LWNLQNANN 290 (393)
T ss_dssp EEEC-----
T ss_pred EEECCCCCC
Confidence 778776654
No 127
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.81 E-value=0.16 Score=55.52 Aligned_cols=189 Identities=12% Similarity=0.078 Sum_probs=106.5
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccC
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~ 131 (795)
+++.+++++.++.|.-.|.++++.+-...- ....+..+.....+..++.++.++.++.||..+|..+-.........
T Consensus 161 ~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~-h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v-- 237 (410)
T 1vyh_C 161 SGKLLASCSADMTIKLWDFQGFECIRTMHG-HDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWV-- 237 (410)
T ss_dssp TSSEEEEEETTSCCCEEETTSSCEEECCCC-CSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCE--
T ss_pred CCCEEEEEeCCCeEEEEeCCCCceeEEEcC-CCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccE--
Confidence 456788899999999999988876533221 11234444222334455545667899999999999887766544322
Q ss_pred CceeccccccccCCCeEEE-E-eCCEEEEEECCCCcEEEEEeccCcceeeeeEEEEe-------------------cCCE
Q 003791 132 PLLLVPTNLKVDKDSLILV-S-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLD-------------------ESDQ 190 (795)
Q Consensus 132 ~~~~~~~~~~~~~~~~V~V-~-~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~-------------------~~~~ 190 (795)
..+ ....++..++ . .++.+...|..+|+..=+........ ..+.... .++.
T Consensus 238 --~~~----~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v--~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 309 (410)
T 1vyh_C 238 --RMV----RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVV--ECISWAPESSYSSISEATGSETKKSGKPGP 309 (410)
T ss_dssp --EEE----EECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCE--EEEEECCSCGGGGGGGCCSCC-------CC
T ss_pred --EEE----EECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceE--EEEEEcCcccccchhhhccccccccCCCCC
Confidence 111 1112344444 3 38899999999988765543322211 1111000 0133
Q ss_pred EEEEEecCCceeEEEEEEcCCCceeeeeeeeccCCcccceEEe-cCcEEEEEECCCCeEEEEEeecCe
Q 003791 191 IYVVGYAGSSQFHAYQINAMNGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 191 Vyvv~~~g~~~~~v~ald~~tG~~~w~~~v~~~~~~~~~~~~v-g~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
.++.+...+ .+..+|..+|+.+...... ...+. .+.+- ++.+++... ..+.+++-|+.+++
T Consensus 310 ~l~sgs~D~---~i~iwd~~~~~~~~~~~~h-~~~v~-~v~~~~~g~~l~s~s-~D~~i~vwd~~~~~ 371 (410)
T 1vyh_C 310 FLLSGSRDK---TIKMWDVSTGMCLMTLVGH-DNWVR-GVLFHSGGKFILSCA-DDKTLRVWDYKNKR 371 (410)
T ss_dssp EEEEEETTS---EEEEEETTTTEEEEEEECC-SSCEE-EEEECSSSSCEEEEE-TTTEEEEECCTTSC
T ss_pred EEEEEeCCC---eEEEEECCCCceEEEEECC-CCcEE-EEEEcCCCCEEEEEe-CCCeEEEEECCCCc
Confidence 343343333 7888999999887655311 11121 12221 334555554 45788888887765
No 128
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=96.80 E-value=0.31 Score=53.67 Aligned_cols=153 Identities=7% Similarity=0.015 Sum_probs=81.7
Q ss_pred EEEEEccCCeEEEEeCC--CCcEeEEEeccC--ccccCCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEE----
Q 003791 98 VITLSSDGSTLRAWNLP--DGQMVWESFLRG--SKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILW---- 168 (795)
Q Consensus 98 ~V~Vs~~g~~v~A~d~~--tG~llWe~~~~~--~~~s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W---- 168 (795)
+++.++.++.|+.||.. +|+.+-...... ... ..+.+.+ + +..+++. .+|.++.++..+|+..-
T Consensus 117 l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v-~~~~~sp-----~-~~~l~~~~~~g~v~~~~~~~~~~~~~~~~ 189 (450)
T 2vdu_B 117 LIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRP-NAISIAE-----D-DTTVIIADKFGDVYSIDINSIPEEKFTQE 189 (450)
T ss_dssp EEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCE-EEEEECT-----T-SSEEEEEETTSEEEEEETTSCCCSSCCCC
T ss_pred EEEEECCCCeEEEEECcCCCCceeeeeecccCCCCc-eEEEEcC-----C-CCEEEEEeCCCcEEEEecCCcccccccce
Confidence 34556667899999999 888776654211 111 1111211 2 2345554 37899999988876432
Q ss_pred EEeccCcceeeeeEEEEec--CCEEEEEEecCCceeEEEEEEcCCCceeeeeeeeccCCcccceEEecCcEEEEEECCCC
Q 003791 169 TRDFAAESVEVQQVIQLDE--SDQIYVVGYAGSSQFHAYQINAMNGELLNHETAAFSGGFVGDVALVSSDTLVTLDTTRS 246 (795)
Q Consensus 169 ~~~~~~~~~~~~~vv~s~~--~~~Vyvv~~~g~~~~~v~ald~~tG~~~w~~~v~~~~~~~~~~~~vg~~~lv~~d~~~~ 246 (795)
........ +..+..+.. ++..++.+..++ .+..+|..+|+.+......-...+.. +.+-++.+++... ..+
T Consensus 190 ~~~~h~~~--v~~~~~sp~~~~~~~l~s~~~d~---~i~vwd~~~~~~~~~~~~~h~~~v~~-~~~sd~~~l~s~~-~d~ 262 (450)
T 2vdu_B 190 PILGHVSM--LTDVHLIKDSDGHQFIITSDRDE---HIKISHYPQCFIVDKWLFGHKHFVSS-ICCGKDYLLLSAG-GDD 262 (450)
T ss_dssp CSEECSSC--EEEEEEEECTTSCEEEEEEETTS---CEEEEEESCTTCEEEECCCCSSCEEE-EEECSTTEEEEEE-SSS
T ss_pred eeecccCc--eEEEEEcCCCCCCcEEEEEcCCC---cEEEEECCCCceeeeeecCCCCceEE-EEECCCCEEEEEe-CCC
Confidence 11111111 222222223 144444343332 57788889998776542122222222 2222445666665 468
Q ss_pred eEEEEEeecCeeeeEEEee
Q 003791 247 ILVTVSFKNRKIAFQETHL 265 (795)
Q Consensus 247 ~L~v~~l~sg~~~~~~~~l 265 (795)
.+.+-|+.+++. .+.+.+
T Consensus 263 ~v~vwd~~~~~~-~~~~~~ 280 (450)
T 2vdu_B 263 KIFAWDWKTGKN-LSTFDY 280 (450)
T ss_dssp EEEEEETTTCCE-EEEEEC
T ss_pred eEEEEECCCCcE-eeeecc
Confidence 999999998872 454543
No 129
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=96.79 E-value=0.098 Score=55.36 Aligned_cols=157 Identities=8% Similarity=-0.026 Sum_probs=86.4
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEe-EEEec-cCccc
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMV-WESFL-RGSKH 129 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~ll-We~~~-~~~~~ 129 (795)
+++.+++++.+|.|.-.|.++|+............+..+.....+..++.++.++.|+.||..+|+.. -+... .....
T Consensus 138 ~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v 217 (343)
T 3lrv_A 138 NTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKI 217 (343)
T ss_dssp -CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCE
T ss_pred CCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCE
Confidence 45678889999999999999999855443333323444422334455665667789999999999977 55554 22221
Q ss_pred cCCceeccccccccCCCeEEEEeCCEEEEEECCCCcEEEEEecc-Ccceeee--eEEEEecCCEEEEEEecCCceeEEEE
Q 003791 130 SKPLLLVPTNLKVDKDSLILVSSKGCLHAVSSIDGEILWTRDFA-AESVEVQ--QVIQLDESDQIYVVGYAGSSQFHAYQ 206 (795)
Q Consensus 130 s~~~~~~~~~~~~~~~~~V~V~~~g~l~ald~~tG~~~W~~~~~-~~~~~~~--~vv~s~~~~~Vyvv~~~g~~~~~v~a 206 (795)
..+.+.+ + +..++..+++.+...|..+++.......- ....... .+.. ..++..++.+..++. .+..
T Consensus 218 -~~l~fs~-----~-g~~l~s~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~l~~~s~~d~--~i~v 287 (343)
T 3lrv_A 218 -KEVKFAD-----N-GYWMVVECDQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDI-DDSGKNMIAYSNESN--SLTI 287 (343)
T ss_dssp -EEEEECT-----T-SSEEEEEESSBEEEEETTSSTTCBSSCCCBC-----CCEEEEE-CTTSSEEEEEETTTT--EEEE
T ss_pred -EEEEEeC-----C-CCEEEEEeCCeEEEEEcCCCCcceeecccccccccccceEEEE-CCCCCEEEEecCCCC--cEEE
Confidence 1111211 1 23344446778888898888755432210 0001000 1211 223444443333122 4555
Q ss_pred EEcCCCceeeee
Q 003791 207 INAMNGELLNHE 218 (795)
Q Consensus 207 ld~~tG~~~w~~ 218 (795)
++..++...|+.
T Consensus 288 ~~~~~~~~~~~~ 299 (343)
T 3lrv_A 288 YKFDKKTKNWTK 299 (343)
T ss_dssp EEECTTTCSEEE
T ss_pred EEEcccccceEe
Confidence 566667777775
No 130
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=96.78 E-value=0.2 Score=50.88 Aligned_cols=183 Identities=10% Similarity=0.116 Sum_probs=99.9
Q ss_pred CCEEEEEeC-CCEEEEEECcCCccceEEEcCCc-ceeeeeeeeeCCEEEEEEc-cCCeEEEEeCCCCcEeEEEeccCccc
Q 003791 53 RKRVVVSTE-ENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIALGKYVITLSS-DGSTLRAWNLPDGQMVWESFLRGSKH 129 (795)
Q Consensus 53 ~~~v~vat~-~g~l~ALn~~tG~ivWR~~l~~~-~~i~~l~~~~g~~~V~Vs~-~g~~v~A~d~~tG~llWe~~~~~~~~ 129 (795)
++.+|+++. .+.|..+|++ |+.. +..++.. ..+.++. ...++.++++. .++.|..+|+. |+.. +.......
T Consensus 72 ~g~l~v~~~~~~~v~~~d~~-g~~~-~~~~~~~~~~~~~i~-~~~~g~l~v~~~~~~~i~~~~~~-g~~~-~~~~~~~~- 145 (300)
T 2qc5_A 72 LGDIWFTENGANKIGKLSKK-GGFT-EYPLPQPDSGPYGIT-EGLNGDIWFTQLNGDRIGKLTAD-GTIY-EYDLPNKG- 145 (300)
T ss_dssp TSCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEE-ECSTTCEEEEETTTTEEEEECTT-SCEE-EEECSSTT-
T ss_pred CCCEEEEecCCCeEEEECCC-CCeE-EecCCCCCCCCccce-ECCCCCEEEEccCCCeEEEECCC-CCEE-EccCCCCC-
Confidence 567898886 6889999998 8763 3334322 1233332 22344555554 35789999997 8876 33332111
Q ss_pred cCCceeccccccccCCCeEEEEe--CCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEE
Q 003791 130 SKPLLLVPTNLKVDKDSLILVSS--KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQI 207 (795)
Q Consensus 130 s~~~~~~~~~~~~~~~~~V~V~~--~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~al 207 (795)
..+..+ ..+.++.+++.. ++.|+.+|. +|+..- +..+.....+..+. ...++.+|+....++ .+..+
T Consensus 146 -~~~~~i----~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~-~d~~g~l~v~~~~~~---~i~~~ 214 (300)
T 2qc5_A 146 -SYPAFI----TLGSDNALWFTENQNNSIGRITN-TGKLEE-YPLPTNAAAPVGIT-SGNDGALWFVEIMGN---KIGRI 214 (300)
T ss_dssp -CCEEEE----EECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEE-ECTTSSEEEEETTTT---EEEEE
T ss_pred -CCceeE----EECCCCCEEEEecCCCeEEEECC-CCcEEE-eeCCCCCCCcceEE-ECCCCCEEEEccCCC---EEEEE
Confidence 111111 233356688764 789999998 787653 33333222244443 234678888665443 68888
Q ss_pred EcCCCceeeeeeeeccCCccc-ceEEe-cCcEEEEEECCCCeEEEEEeecCe
Q 003791 208 NAMNGELLNHETAAFSGGFVG-DVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 208 d~~tG~~~w~~~v~~~~~~~~-~~~~v-g~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
|+ +|+..... .+..... ..+.+ .++.+.+.+..++.+...+. ++.
T Consensus 215 ~~-~g~~~~~~---~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~ 261 (300)
T 2qc5_A 215 TT-TGEISEYD---IPTPNARPHAITAGKNSEIWFTEWGANQIGRITN-DNT 261 (300)
T ss_dssp CT-TCCEEEEE---CSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSC
T ss_pred cC-CCcEEEEE---CCCCCCCceEEEECCCCCEEEeccCCCeEEEECC-CCc
Confidence 98 77655321 2222222 12222 22334445544566766665 444
No 131
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.76 E-value=0.88 Score=49.45 Aligned_cols=146 Identities=10% Similarity=0.070 Sum_probs=84.2
Q ss_pred EEEEeCCCEEEEEECcCCccceEEEcCCc-ceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccCCce
Q 003791 56 VVVSTEENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKPLL 134 (795)
Q Consensus 56 v~vat~~g~l~ALn~~tG~ivWR~~l~~~-~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~~~~ 134 (795)
+++..-++.|+--|+.||++.-...+... ..+..+.....+..+++++.++.|+.||..+|+.+.......... .
T Consensus 118 ~lAvgld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v----~ 193 (420)
T 4gga_A 118 VLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARV----G 193 (420)
T ss_dssp EEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE----E
T ss_pred EEEEEeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCce----E
Confidence 44444589999999999999887777554 335544333344455556667899999999999998887654332 1
Q ss_pred eccccccccCCCeEEEEe-CCEEEEEECCCCcE-EEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcCCC
Q 003791 135 LVPTNLKVDKDSLILVSS-KGCLHAVSSIDGEI-LWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNG 212 (795)
Q Consensus 135 ~~~~~~~~~~~~~V~V~~-~g~l~ald~~tG~~-~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~tG 212 (795)
.+ ..+ ...++..+ ++.+...|...... ........... ..+.....+..+...+.+| .+...|..+|
T Consensus 194 ~~----s~~-~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~--~~~~~~~~g~~l~s~~~D~----~v~i~~~~~~ 262 (420)
T 4gga_A 194 SL----SWN-SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEV--CGLRWAPDGRHLASGGNDN----LVNVWPSAPG 262 (420)
T ss_dssp EE----EEE-TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCE--EEEEECTTSSEEEEEETTS----CEEEEESSCC
T ss_pred EE----eeC-CCEEEEEeCCCceeEeeecccceeeEEecccccce--eeeeecCCCCeeeeeeccc----cceEEeeccc
Confidence 11 112 23333333 77777777665432 23332222111 1121122334444434344 5677788887
Q ss_pred ceee
Q 003791 213 ELLN 216 (795)
Q Consensus 213 ~~~w 216 (795)
+...
T Consensus 263 ~~~~ 266 (420)
T 4gga_A 263 EGGW 266 (420)
T ss_dssp SSCS
T ss_pred cccc
Confidence 7543
No 132
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=96.74 E-value=0.12 Score=57.02 Aligned_cols=155 Identities=10% Similarity=0.046 Sum_probs=88.8
Q ss_pred CCCEE-EEEeCCCEEEEEECc--CCccceEEEc-CCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeE----EEe
Q 003791 52 GRKRV-VVSTEENVIASLDLR--HGEIFWRHVL-GINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVW----ESF 123 (795)
Q Consensus 52 ~~~~v-~vat~~g~l~ALn~~--tG~ivWR~~l-~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llW----e~~ 123 (795)
+++.+ ++++.+|.|...|.. +|+.+-.... ..+..+..+....++..+++++.++.++.|+..+|...- ...
T Consensus 113 d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~ 192 (450)
T 2vdu_B 113 DESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPIL 192 (450)
T ss_dssp TSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSE
T ss_pred CCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeee
Confidence 45565 667788999999988 8877655432 111223333222344455556666799999999887543 211
Q ss_pred ccCccccCCceeccccccccCC---CeEEE-Ee-CCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecC
Q 003791 124 LRGSKHSKPLLLVPTNLKVDKD---SLILV-SS-KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAG 198 (795)
Q Consensus 124 ~~~~~~s~~~~~~~~~~~~~~~---~~V~V-~~-~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g 198 (795)
...... ..+.+ ..+ +..++ .+ ++.++..|..+|+....+....... +..+..+ .+..++..+.++
T Consensus 193 ~h~~~v-~~~~~-------sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~-v~~~~~s-d~~~l~s~~~d~ 262 (450)
T 2vdu_B 193 GHVSML-TDVHL-------IKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHF-VSSICCG-KDYLLLSAGGDD 262 (450)
T ss_dssp ECSSCE-EEEEE-------EECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSC-EEEEEEC-STTEEEEEESSS
T ss_pred cccCce-EEEEE-------cCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCc-eEEEEEC-CCCEEEEEeCCC
Confidence 111111 11111 113 43444 33 8889999998888776643222111 2233323 455555555444
Q ss_pred CceeEEEEEEcCCCceeeeeee
Q 003791 199 SSQFHAYQINAMNGELLNHETA 220 (795)
Q Consensus 199 ~~~~~v~ald~~tG~~~w~~~v 220 (795)
.+..+|..+|+.+.....
T Consensus 263 ----~v~vwd~~~~~~~~~~~~ 280 (450)
T 2vdu_B 263 ----KIFAWDWKTGKNLSTFDY 280 (450)
T ss_dssp ----EEEEEETTTCCEEEEEEC
T ss_pred ----eEEEEECCCCcEeeeecc
Confidence 788999999998876653
No 133
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=96.71 E-value=0.051 Score=56.71 Aligned_cols=186 Identities=11% Similarity=-0.004 Sum_probs=101.9
Q ss_pred CCC-EEEEEeCCCEEEEEEC-cCCccceEEEcCC---cceeeeeeeeeCCEEEEEEccCCeEEEEeCCC---------Cc
Q 003791 52 GRK-RVVVSTEENVIASLDL-RHGEIFWRHVLGI---NDVVDGIDIALGKYVITLSSDGSTLRAWNLPD---------GQ 117 (795)
Q Consensus 52 ~~~-~v~vat~~g~l~ALn~-~tG~ivWR~~l~~---~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~t---------G~ 117 (795)
+++ .+++++.+|.|...|. ++|+. +.+.. ...+..+.... +..++.++.++.++.||..+ ++
T Consensus 67 ~~~~~l~~~~~dg~i~~wd~~~~~~~---~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~ 142 (342)
T 1yfq_A 67 NTDLQIYVGTVQGEILKVDLIGSPSF---QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNL 142 (342)
T ss_dssp SSSEEEEEEETTSCEEEECSSSSSSE---EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEES
T ss_pred CCCcEEEEEcCCCeEEEEEeccCCce---EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCC
Confidence 466 7999999999999999 88876 33332 23344442222 44555466677999999988 77
Q ss_pred EeEEEeccCccccCCceeccccccccCCCeEEEE-eCCEEEEEECCC-CcEEEEEeccCcceeeeeEEEEe-cCCEEEEE
Q 003791 118 MVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSID-GEILWTRDFAAESVEVQQVIQLD-ESDQIYVV 194 (795)
Q Consensus 118 llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~t-G~~~W~~~~~~~~~~~~~vv~s~-~~~~Vyvv 194 (795)
.+.......... .+ ... .+.+++. .++.+..+|..+ +..............+..+.... .+..+++.
T Consensus 143 ~~~~~~~~~~v~-----~~----~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~ 212 (342)
T 1yfq_A 143 NSNNTKVKNKIF-----TM----DTN-SSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACS 212 (342)
T ss_dssp CSSSSSSCCCEE-----EE----EEC-SSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEE
T ss_pred eeeEEeeCCceE-----EE----Eec-CCcEEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEE
Confidence 776655332211 11 122 2335554 488999999988 76433322211111122232222 33444443
Q ss_pred EecCCceeEEEEEEcCCC------ceeeeeeeecc--------CCcccceEEe-cCcEEEEEECCCCeEEEEEeecCe
Q 003791 195 GYAGSSQFHAYQINAMNG------ELLNHETAAFS--------GGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 195 ~~~g~~~~~v~ald~~tG------~~~w~~~v~~~--------~~~~~~~~~v-g~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
+.+| .+...|..++ +.......... ..+. .+.+- .++++++.. ..|.+++.++.+++
T Consensus 213 ~~dg----~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~s~~~~~l~~~~-~dg~i~vwd~~~~~ 284 (342)
T 1yfq_A 213 SIDG----RVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVN-SIEFSPRHKFLYTAG-SDGIISCWNLQTRK 284 (342)
T ss_dssp ETTS----EEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEE-EEEECTTTCCEEEEE-TTSCEEEEETTTTE
T ss_pred ecCC----cEEEEEEcCCCcccccccceeeecccccccccccceeEE-EEEEcCCCCEEEEec-CCceEEEEcCccHh
Confidence 3333 5666666665 55444432111 0111 11121 344555555 45889999998876
No 134
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=96.70 E-value=0.79 Score=48.22 Aligned_cols=162 Identities=14% Similarity=0.145 Sum_probs=92.2
Q ss_pred CCEEEEEeC-CCEEEEEECcCCc--cceEEEcCC-----cc---eeeeeeeeeCCEEEEEEc--cCCeEEEEeCCCCcEe
Q 003791 53 RKRVVVSTE-ENVIASLDLRHGE--IFWRHVLGI-----ND---VVDGIDIALGKYVITLSS--DGSTLRAWNLPDGQMV 119 (795)
Q Consensus 53 ~~~v~vat~-~g~l~ALn~~tG~--ivWR~~l~~-----~~---~i~~l~~~~g~~~V~Vs~--~g~~v~A~d~~tG~ll 119 (795)
++.+|+++. ++.|..+|+ +|+ .++...-.. .. ...++.+...++.++|+. .+++|+.|| .+|+.+
T Consensus 101 ~g~l~v~d~~~~~v~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~ 178 (329)
T 3fvz_A 101 DGNYWVTDVALHQVFKLDP-HSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFV 178 (329)
T ss_dssp TSCEEEEETTTTEEEEECT-TCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEE
T ss_pred CCCEEEEECCCCEEEEEeC-CCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEE
Confidence 556888765 689999997 566 454432100 00 122332222255666654 368999999 689999
Q ss_pred EEEeccCcccc--CCceeccccccccCC-CeEEEEe--CCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEE
Q 003791 120 WESFLRGSKHS--KPLLLVPTNLKVDKD-SLILVSS--KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVV 194 (795)
Q Consensus 120 We~~~~~~~~s--~~~~~~~~~~~~~~~-~~V~V~~--~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv 194 (795)
+.....+.... ......|.....+.+ +.++|.. +++|..+|..+|+.+.+...+.....+..+. ..++.+|+.
T Consensus 179 ~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~--~~pg~~~~~ 256 (329)
T 3fvz_A 179 TQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAIS--YIPGFLFAV 256 (329)
T ss_dssp EEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEE--EETTEEEEE
T ss_pred EEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceee--ecCCEEEEe
Confidence 88754322100 000001111234444 7888873 8899999999999998886543222233332 233555543
Q ss_pred Eec----CCceeEEEEEEcCCCceeeee
Q 003791 195 GYA----GSSQFHAYQINAMNGELLNHE 218 (795)
Q Consensus 195 ~~~----g~~~~~v~ald~~tG~~~w~~ 218 (795)
.-. +.....+..+|..+|+.+...
T Consensus 257 ~g~~~v~~~~~~~v~~~~~~~g~~~~~~ 284 (329)
T 3fvz_A 257 NGKPYFGDQEPVQGFVMNFSSGEIIDVF 284 (329)
T ss_dssp ECCCCTTCSCCCCEEEEETTTCCEEEEE
T ss_pred CCCEEeccCCCcEEEEEEcCCCeEEEEE
Confidence 211 111236888999999988654
No 135
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=96.67 E-value=0.12 Score=58.67 Aligned_cols=189 Identities=12% Similarity=0.109 Sum_probs=110.8
Q ss_pred CCCEEEEEeCC----CEEEEEECcCCccceEEEcCCcceeeeeeeee-CCEEEEEEccCCeEEEEeCCCCcEeEEEeccC
Q 003791 52 GRKRVVVSTEE----NVIASLDLRHGEIFWRHVLGINDVVDGIDIAL-GKYVITLSSDGSTLRAWNLPDGQMVWESFLRG 126 (795)
Q Consensus 52 ~~~~v~vat~~----g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~-g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~ 126 (795)
++..+++++.+ +.|...| +|+.+.+..-. ...+..+.... +...++.++.++.++.||..+|+.+.......
T Consensus 127 ~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~ 203 (615)
T 1pgu_A 127 EGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGH-SQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHH 203 (615)
T ss_dssp TSSEEEEEECCSSCSEEEEETT--TCCEEEECCSC-SSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSS
T ss_pred CCCEEEEeccCCCCccEEEEEE--CCCcceeeecC-CccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccC
Confidence 45567777766 5777776 66655543221 12333332222 33255556667899999999999998877554
Q ss_pred c---cccCCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEec---cCcceeeeeEEEEecCCEEEEEEecCC
Q 003791 127 S---KHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDF---AAESVEVQQVIQLDESDQIYVVGYAGS 199 (795)
Q Consensus 127 ~---~~s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~---~~~~~~~~~vv~s~~~~~Vyvv~~~g~ 199 (795)
. .. ..+.+.+ +.+..+++. .+|.++..|..+|+...+... .... ....+..+ .+..++..+.+|
T Consensus 204 ~~~~~v-~~~~~~~-----~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~-~v~~~~~~-~~~~l~~~~~d~- 274 (615)
T 1pgu_A 204 KQGSFV-RDVEFSP-----DSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQG-GIFALSWL-DSQKFATVGADA- 274 (615)
T ss_dssp CTTCCE-EEEEECS-----TTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCS-CEEEEEES-SSSEEEEEETTS-
T ss_pred CCCceE-EEEEECC-----CCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCC-ceEEEEEc-CCCEEEEEcCCC-
Confidence 3 22 1111211 102334444 489999999999999888722 1111 12233323 444455444444
Q ss_pred ceeEEEEEEcCCCceeeeeeeeccCCccc---ceEEecCcEEEEEECCCCeEEEEEeecCe
Q 003791 200 SQFHAYQINAMNGELLNHETAAFSGGFVG---DVALVSSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 200 ~~~~v~ald~~tG~~~w~~~v~~~~~~~~---~~~~vg~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
.+..+|..+|+.+....... ..... .+.+..++.+++... .+.+++.++.+++
T Consensus 275 ---~i~~wd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~-~g~i~~~d~~~~~ 330 (615)
T 1pgu_A 275 ---TIRVWDVTTSKCVQKWTLDK-QQLGNQQVGVVATGNGRIISLSL-DGTLNFYELGHDE 330 (615)
T ss_dssp ---EEEEEETTTTEEEEEEECCT-TCGGGCEEEEEEEETTEEEEEET-TSCEEEEETTEEE
T ss_pred ---cEEEEECCCCcEEEEEcCCC-CcccCceeEEEeCCCCeEEEEEC-CCCEEEEECCCCc
Confidence 78889999999887765331 11111 233335667777664 5889999988765
No 136
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=96.66 E-value=0.41 Score=51.42 Aligned_cols=152 Identities=13% Similarity=0.142 Sum_probs=86.5
Q ss_pred CCEEEEEEc-cCCeEEEEeCCCCcEeEEEeccCccccCCceeccccccccCCCeEEE-EeCCEEEEEECCCCcEEEEEec
Q 003791 95 GKYVITLSS-DGSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILV-SSKGCLHAVSSIDGEILWTRDF 172 (795)
Q Consensus 95 g~~~V~Vs~-~g~~v~A~d~~tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V-~~~g~l~ald~~tG~~~W~~~~ 172 (795)
|..+++.++ .++.|+.||..+|+++.+.....+.. ++.+-| ++..++ .+++.+..++..+|+..-....
T Consensus 145 g~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~--~v~fsp-------dg~~l~s~s~~~~~~~~~~~~~~~~~~~~ 215 (365)
T 4h5i_A 145 GTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVK--DLHFST-------DGKVVAYITGSSLEVISTVTGSCIARKTD 215 (365)
T ss_dssp SSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCC--EEEECT-------TSSEEEEECSSCEEEEETTTCCEEEEECC
T ss_pred CCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceE--EEEEcc-------CCceEEeccceeEEEEEeccCcceeeeec
Confidence 444444454 46899999999999999987655432 332322 444444 4678889999999987655444
Q ss_pred cCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcCCCceeeee--eeecc-CCcccceEEe-cCcEEEEEECCCCeE
Q 003791 173 AAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHE--TAAFS-GGFVGDVALV-SSDTLVTLDTTRSIL 248 (795)
Q Consensus 173 ~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~tG~~~w~~--~v~~~-~~~~~~~~~v-g~~~lv~~d~~~~~L 248 (795)
.........+..+..+..+...+.+++....+..+|..++...-.. .+... ..+. .+.+- .+.++++.. ..+.+
T Consensus 216 ~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~-~~~~Spdg~~lasgs-~D~~V 293 (365)
T 4h5i_A 216 FDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGIT-SMDVDMKGELAVLAS-NDNSI 293 (365)
T ss_dssp CCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEE-EEEECTTSCEEEEEE-TTSCE
T ss_pred CCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeE-eEEECCCCCceEEEc-CCCEE
Confidence 3333223333333344445555555544456666676666543222 11111 1111 11121 345666665 45889
Q ss_pred EEEEeecCe
Q 003791 249 VTVSFKNRK 257 (795)
Q Consensus 249 ~v~~l~sg~ 257 (795)
.+-|+.+++
T Consensus 294 ~iwd~~~~~ 302 (365)
T 4h5i_A 294 ALVKLKDLS 302 (365)
T ss_dssp EEEETTTTE
T ss_pred EEEECCCCc
Confidence 999998887
No 137
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.66 E-value=0.067 Score=55.59 Aligned_cols=146 Identities=8% Similarity=0.056 Sum_probs=87.7
Q ss_pred CEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccCCc
Q 003791 54 KRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKPL 133 (795)
Q Consensus 54 ~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~~~ 133 (795)
..++.++.++.|...|.++|+.+.+..-- ...+..+.....+..++.++.++.++.||..+++.+.......... ..
T Consensus 186 ~~~~s~~~d~~i~i~d~~~~~~~~~~~~h-~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~--~~ 262 (340)
T 4aow_A 186 PIIVSCGWDKLVKVWNLANCKLKTNHIGH-TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIIN--AL 262 (340)
T ss_dssp CEEEEEETTSCEEEEETTTTEEEEEECCC-SSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEE--EE
T ss_pred cEEEEEcCCCEEEEEECCCCceeeEecCC-CCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEE--ee
Confidence 34667788999999999999877654322 2234444222334455556667899999999999998887654322 11
Q ss_pred eeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEeccCcce-------eeeeEEEEecCCEEEEEEecCCceeEEE
Q 003791 134 LLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESV-------EVQQVIQLDESDQIYVVGYAGSSQFHAY 205 (795)
Q Consensus 134 ~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~~~~-------~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ 205 (795)
... .++.+++. .++.+...|..++...++.+...... ....+..+..+..++..+.+| .+.
T Consensus 263 ~~~-------~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg----~v~ 331 (340)
T 4aow_A 263 CFS-------PNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDN----LVR 331 (340)
T ss_dssp EEC-------SSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTS----CEE
T ss_pred ecC-------CCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCC----EEE
Confidence 111 13445554 69999999999999988876432111 011121122333444444444 567
Q ss_pred EEEcCCCc
Q 003791 206 QINAMNGE 213 (795)
Q Consensus 206 ald~~tG~ 213 (795)
..|++||.
T Consensus 332 iW~~~tGt 339 (340)
T 4aow_A 332 VWQVTIGT 339 (340)
T ss_dssp EEEEEC--
T ss_pred EEeCCCcC
Confidence 77777775
No 138
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.64 E-value=0.26 Score=52.48 Aligned_cols=188 Identities=13% Similarity=0.050 Sum_probs=106.1
Q ss_pred CEEEEEeCCCEEEEEECcCCccceEEEcC-Ccceeeeeeeee-CCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccC
Q 003791 54 KRVVVSTEENVIASLDLRHGEIFWRHVLG-INDVVDGIDIAL-GKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (795)
Q Consensus 54 ~~v~vat~~g~l~ALn~~tG~ivWR~~l~-~~~~i~~l~~~~-g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~ 131 (795)
+.+++++.+|.|.-.|..+|+..-...+. ....+..+.... ++..++.++.++.++.||..+ ..+-......... .
T Consensus 87 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~-~ 164 (383)
T 3ei3_B 87 TTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWD-Y 164 (383)
T ss_dssp TEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSS-C
T ss_pred CEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCC-C
Confidence 67999999999999999999988776642 233444442222 334555566678999999985 4443433322100 0
Q ss_pred CceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCC-EEEEEEecCCceeEEEEEEc
Q 003791 132 PLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESD-QIYVVGYAGSSQFHAYQINA 209 (795)
Q Consensus 132 ~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~-~Vyvv~~~g~~~~~v~ald~ 209 (795)
....+.. ..+ ...++.. .+|.+...|. +|+............ ..+.....+. .++..+.++ .+..+|.
T Consensus 165 ~v~~~~~--~~~-~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v--~~~~~~~~~~~~l~s~~~d~----~i~iwd~ 234 (383)
T 3ei3_B 165 WYCCVDV--SVS-RQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKV--THAEFNPRCDWLMATSSVDA----TVKLWDL 234 (383)
T ss_dssp CEEEEEE--ETT-TTEEEEEETTSEEEEEET-TSCEEEEEECSSSCE--EEEEECSSCTTEEEEEETTS----EEEEEEG
T ss_pred CeEEEEE--CCC-CCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcE--EEEEECCCCCCEEEEEeCCC----EEEEEeC
Confidence 1111110 112 2344444 4899999998 788888876544332 2232222333 344434344 7888899
Q ss_pred CC----CceeeeeeeeccCCcccceEEe--cCcEEEEEECCCCeEEEEEeecCe
Q 003791 210 MN----GELLNHETAAFSGGFVGDVALV--SSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 210 ~t----G~~~w~~~v~~~~~~~~~~~~v--g~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
.+ +..+... .....+.. +.+- .+..+++.. ..+.+++.++.+++
T Consensus 235 ~~~~~~~~~~~~~--~~~~~v~~-~~~s~~~~~~l~~~~-~d~~i~iwd~~~~~ 284 (383)
T 3ei3_B 235 RNIKDKNSYIAEM--PHEKPVNA-AYFNPTDSTKLLTTD-QRNEIRVYSSYDWS 284 (383)
T ss_dssp GGCCSTTCEEEEE--ECSSCEEE-EEECTTTSCEEEEEE-SSSEEEEEETTBTT
T ss_pred CCCCcccceEEEe--cCCCceEE-EEEcCCCCCEEEEEc-CCCcEEEEECCCCc
Confidence 88 4444333 21222211 1221 234555555 45889999988866
No 139
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=96.61 E-value=0.77 Score=46.85 Aligned_cols=146 Identities=10% Similarity=0.039 Sum_probs=79.9
Q ss_pred CEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccCCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEeccC
Q 003791 96 KYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAA 174 (795)
Q Consensus 96 ~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~ 174 (795)
++++.++. ++.|+.||..+|+.+-...+..... ....+.. ..+ ++.++.. .+|.+...|..+|+.+.+.....
T Consensus 36 ~~~lAvg~-D~tV~iWd~~tg~~~~~~~~~~~~~--~V~~v~~--~~~-~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~ 109 (318)
T 4ggc_A 36 GNVLAVAL-DNSVYLWSASSGDILQLLQMEQPGE--YISSVAW--IKE-GNYLAVGTSSAEVQLWDVQQQKRLRNMTSHS 109 (318)
T ss_dssp TSEEEEEE-TTEEEEEETTTCCEEEEEECCSTTC--CEEEEEE--CTT-SSEEEEEETTSEEEEEETTTTEEEEEEECCS
T ss_pred CCEEEEEe-CCEEEEEECCCCCEEEEEEecCCCC--eEEEEEE--CCC-CCEEEEEECCCcEEEeecCCceeEEEecCcc
Confidence 34666665 5699999999999988777654321 1111110 112 2344444 48999999999999998876554
Q ss_pred cceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcCCCceeeeeeeeccCCcccceEEe-cCcEEEEEECCCCeEEEEEe
Q 003791 175 ESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSF 253 (795)
Q Consensus 175 ~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~tG~~~w~~~v~~~~~~~~~~~~v-g~~~lv~~d~~~~~L~v~~l 253 (795)
... ..+ +..+..+...+..+ .+...+..++...-.........+. ...+. .+..++... ..+.+.+-|+
T Consensus 110 ~~~--~~~--~~~~~~l~s~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~s~~-~d~~i~iwd~ 179 (318)
T 4ggc_A 110 ARV--GSL--SWNSYILSSGSRSG----HIHHHDVRVAEHHVATLSGHSQEVC-GLRWAPDGRHLASGG-NDNLVNVWPS 179 (318)
T ss_dssp SCE--EEE--EEETTEEEEEETTS----EEEEEETTSSSCEEEEEECCSSCEE-EEEECTTSSEEEEEE-TTSCEEEEES
T ss_pred ceE--EEe--ecCCCEEEEEecCC----ceEeeecCCCceeEEEEcCccCceE-EEEEcCCCCEEEEEe-cCcceeEEEC
Confidence 332 111 23444444433333 4555666655443222111111111 11111 334555554 4578888888
Q ss_pred ecCe
Q 003791 254 KNRK 257 (795)
Q Consensus 254 ~sg~ 257 (795)
.+++
T Consensus 180 ~~~~ 183 (318)
T 4ggc_A 180 APGE 183 (318)
T ss_dssp SCBT
T ss_pred CCCc
Confidence 8765
No 140
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.56 E-value=0.11 Score=52.44 Aligned_cols=184 Identities=10% Similarity=-0.005 Sum_probs=91.2
Q ss_pred CCEEEE-E-eCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCcccc
Q 003791 53 RKRVVV-S-TEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHS 130 (795)
Q Consensus 53 ~~~v~v-a-t~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s 130 (795)
++++|+ + +..+.|..+|+.++.. +...........++. ...++.++++..++.|+.||+.++ ..+........
T Consensus 34 ~g~l~v~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~p~~i~-~~~~g~l~v~~~~~~i~~~d~~~~-~~~~~~~~~~~-- 108 (270)
T 1rwi_B 34 AGNVYVTSEGMYGRVVKLATGSTGT-TVLPFNGLYQPQGLA-VDGAGTVYVTDFNNRVVTLAAGSN-NQTVLPFDGLN-- 108 (270)
T ss_dssp TCCEEEEECSSSCEEEEECC------EECCCCSCCSCCCEE-ECTTCCEEEEETTTEEEEECTTCS-CCEECCCCSCS--
T ss_pred CCCEEEEccCCCCcEEEecCCCccc-ceEeeCCcCCcceeE-ECCCCCEEEEcCCCEEEEEeCCCc-eEeeeecCCcC--
Confidence 556898 7 5678999999876653 322222111222332 233344666554678999998654 44443322211
Q ss_pred CCceeccccccccCCCeEEEEe--CCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEE
Q 003791 131 KPLLLVPTNLKVDKDSLILVSS--KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQIN 208 (795)
Q Consensus 131 ~~~~~~~~~~~~~~~~~V~V~~--~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald 208 (795)
.+.-+ ..+.++.+++.. ++.|+.++..++...+.. ......+..+. ...++.+|+....++ .+..+|
T Consensus 109 -~p~~i----~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~--~~~~~~p~~i~-~~~~g~l~v~~~~~~---~i~~~~ 177 (270)
T 1rwi_B 109 -YPEGL----AVDTQGAVYVADRGNNRVVKLAAGSKTQTVLP--FTGLNDPDGVA-VDNSGNVYVTDTDNN---RVVKLE 177 (270)
T ss_dssp -SEEEE----EECTTCCEEEEEGGGTEEEEECTTCCSCEECC--CCSCCSCCCEE-ECTTCCEEEEEGGGT---EEEEEC
T ss_pred -CCcce----EECCCCCEEEEECCCCEEEEEECCCceeEeec--cccCCCceeEE-EeCCCCEEEEECCCC---EEEEEe
Confidence 11111 233356677763 789999976665544321 11111133342 234567888665433 788899
Q ss_pred cCCCceeeeeeeeccCCccc-ceEEe-cCcEEEEEECCCCeEEEEEeecC
Q 003791 209 AMNGELLNHETAAFSGGFVG-DVALV-SSDTLVTLDTTRSILVTVSFKNR 256 (795)
Q Consensus 209 ~~tG~~~w~~~v~~~~~~~~-~~~~v-g~~~lv~~d~~~~~L~v~~l~sg 256 (795)
..++...... ...+.. ..+.+ .++.+++.+..++.+...+...+
T Consensus 178 ~~~~~~~~~~----~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~ 223 (270)
T 1rwi_B 178 AESNNQVVLP----FTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGST 223 (270)
T ss_dssp TTTCCEEECC----CSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCS
T ss_pred cCCCceEeec----ccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCC
Confidence 8776543221 111111 11222 22344455555556666665443
No 141
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.50 E-value=0.95 Score=46.60 Aligned_cols=191 Identities=13% Similarity=0.155 Sum_probs=98.8
Q ss_pred CCCEEEEEeCC-CEEEEEECc--CCccceEEEcCCcceeeeeeeeeCCEEEEEEc-cCCeEEEEeCCCCc---EeEEEec
Q 003791 52 GRKRVVVSTEE-NVIASLDLR--HGEIFWRHVLGINDVVDGIDIALGKYVITLSS-DGSTLRAWNLPDGQ---MVWESFL 124 (795)
Q Consensus 52 ~~~~v~vat~~-g~l~ALn~~--tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~-~g~~v~A~d~~tG~---llWe~~~ 124 (795)
+++.+|+++.+ +.|..++.. +|+..=...+.....+..+....++..+++++ .++.++.||..+|. .......
T Consensus 48 dg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~ 127 (343)
T 1ri6_A 48 DKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG 127 (343)
T ss_dssp TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC
T ss_pred CCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccC
Confidence 46668888876 888775554 77743222232222233332233344455544 46789999995554 3333332
Q ss_pred cCccccCCceeccccccccCCCeEEEE--eCCEEEEEECCC-CcEEEE----EeccCcceeeeeEEEEecCCEEEEEEec
Q 003791 125 RGSKHSKPLLLVPTNLKVDKDSLILVS--SKGCLHAVSSID-GEILWT----RDFAAESVEVQQVIQLDESDQIYVVGYA 197 (795)
Q Consensus 125 ~~~~~s~~~~~~~~~~~~~~~~~V~V~--~~g~l~ald~~t-G~~~W~----~~~~~~~~~~~~vv~s~~~~~Vyvv~~~ 197 (795)
.... ..+.+.+ + ++.+++. .++.+..+|..+ |+..-. ...+... .+..+..+..+..+|+.+..
T Consensus 128 ~~~~--~~~~~s~-----d-g~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~pdg~~l~~~~~~ 198 (343)
T 1ri6_A 128 LDGC--HSANISP-----D-NRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGA-GPRHMVFHPNEQYAYCVNEL 198 (343)
T ss_dssp CTTB--CCCEECT-----T-SSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTC-CEEEEEECTTSSEEEEEETT
T ss_pred CCCc--eEEEECC-----C-CCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCC-CcceEEECCCCCEEEEEeCC
Confidence 2211 1122221 2 3456665 378999999887 875432 2222221 23334333345557776533
Q ss_pred CCceeEEEEEEc--CCCceeeeeeee-ccCCccc-----ceEEe-cCcEEEEEECCCCeEEEEEee
Q 003791 198 GSSQFHAYQINA--MNGELLNHETAA-FSGGFVG-----DVALV-SSDTLVTLDTTRSILVTVSFK 254 (795)
Q Consensus 198 g~~~~~v~ald~--~tG~~~w~~~v~-~~~~~~~-----~~~~v-g~~~lv~~d~~~~~L~v~~l~ 254 (795)
.+ .+..+|. .+|+......+. .+.+..+ .+.+- .+..+++.+...+.+.+.++.
T Consensus 199 ~~---~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 199 NS---SVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp TT---EEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CC---EEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence 32 5566666 567664333322 2322111 12222 234666666667889998887
No 142
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=96.48 E-value=0.17 Score=52.09 Aligned_cols=148 Identities=8% Similarity=0.049 Sum_probs=77.7
Q ss_pred CCEEEEE--------eCCCEEEEEECcCCccceEEEcC----CcceeeeeeeeeCC-EEEEEEccCCeEEEEeCCCCcEe
Q 003791 53 RKRVVVS--------TEENVIASLDLRHGEIFWRHVLG----INDVVDGIDIALGK-YVITLSSDGSTLRAWNLPDGQMV 119 (795)
Q Consensus 53 ~~~v~va--------t~~g~l~ALn~~tG~ivWR~~l~----~~~~i~~l~~~~g~-~~V~Vs~~g~~v~A~d~~tG~ll 119 (795)
++.+|++ +.++.|..+|+++|+.. +...+ ....+.++. ...+ +.++++..+..|+.||.. |+..
T Consensus 28 ~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~-~~~~~~~~~~~~~~~~i~-~~~~~g~l~v~~~~~~l~~~d~~-g~~~ 104 (314)
T 1pjx_A 28 NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKT-VICKPEVNGYGGIPAGCQ-CDRDANQLFVADMRLGLLVVQTD-GTFE 104 (314)
T ss_dssp TSCEEEEETTCEETTEECCEEEEECTTTCCEE-EEECCEETTEECCEEEEE-ECSSSSEEEEEETTTEEEEEETT-SCEE
T ss_pred CCCEEEEEeccccCCCCCCEEEEEeCCCCcEE-EEEecccCCCCCCCceEE-EecCCCcEEEEECCCCEEEEeCC-CCEE
Confidence 5678888 67899999999999863 22221 111223331 2333 556666544589999998 8865
Q ss_pred EE-EeccCccccCCceeccccccccCCCeEEEEe--C---------------CEEEEEECCCCcEEEEEeccCcceeeee
Q 003791 120 WE-SFLRGSKHSKPLLLVPTNLKVDKDSLILVSS--K---------------GCLHAVSSIDGEILWTRDFAAESVEVQQ 181 (795)
Q Consensus 120 We-~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~~--~---------------g~l~ald~~tG~~~W~~~~~~~~~~~~~ 181 (795)
.- ........ ...+.....+.++.+++.. + +.|+++|.. |+......... .+..
T Consensus 105 ~~~~~~~~~~~----~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~---~~~~ 176 (314)
T 1pjx_A 105 EIAKKDSEGRR----MQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQ---FPNG 176 (314)
T ss_dssp ECCSBCTTSCB----CBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEES---SEEE
T ss_pred EEEeccCCCcc----ccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCC---Ccce
Confidence 33 22111100 0001111334456677763 2 689999876 77654322111 1223
Q ss_pred EEEEe---cCC-EEEEEEecCCceeEEEEEEcC-CCce
Q 003791 182 VIQLD---ESD-QIYVVGYAGSSQFHAYQINAM-NGEL 214 (795)
Q Consensus 182 vv~s~---~~~-~Vyvv~~~g~~~~~v~ald~~-tG~~ 214 (795)
+.... .++ .+|+.....+ .+..+|.. +|+.
T Consensus 177 i~~~~~~d~dg~~l~v~~~~~~---~i~~~~~~~~g~~ 211 (314)
T 1pjx_A 177 IAVRHMNDGRPYQLIVAETPTK---KLWSYDIKGPAKI 211 (314)
T ss_dssp EEEEECTTSCEEEEEEEETTTT---EEEEEEEEETTEE
T ss_pred EEEecccCCCCCEEEEEECCCC---eEEEEECCCCCcc
Confidence 32220 233 5776554333 57777765 5654
No 143
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=96.43 E-value=0.058 Score=61.64 Aligned_cols=155 Identities=14% Similarity=0.157 Sum_probs=90.4
Q ss_pred CEEEEEEccCCeEEEEeCCCCcEeEEEecc----------Ccccc--------CCceeccccccccC-CCeEEEEe----
Q 003791 96 KYVITLSSDGSTLRAWNLPDGQMVWESFLR----------GSKHS--------KPLLLVPTNLKVDK-DSLILVSS---- 152 (795)
Q Consensus 96 ~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~----------~~~~s--------~~~~~~~~~~~~~~-~~~V~V~~---- 152 (795)
..+|+++++++.|+|+|+. |+++|-+--. .+... ...+.+. .....+ .+.+++..
T Consensus 85 ~~~VyvGaNDGmLHaF~a~-G~E~wAfiP~~~l~~L~~l~~~~y~~~~h~Y~VDG~p~~~-Dv~~~g~wrtvLvggmg~G 162 (570)
T 3hx6_A 85 APRVYVGANDGMLHGFDTD-GNETFAFIPSAVFEKMHKLTARGYQGGAHQFYVDGSPVVA-DAFFGGAWHTVLIGSLRAG 162 (570)
T ss_dssp CCEEEEECSSSCEEECCSS-CCCCEEECCHHHHHHCC-------CCHHHHHHHHCCCEEE-EEEETTEEEEEEEEECTTS
T ss_pred ccEEEEECCCceEEEECCC-CcEEEEECCHHHHHHHHHHhccCccccCcceecCCCCEEE-EEEeCCcceEEEEEecCCC
Confidence 4688999988999999998 9999998421 11000 0111111 000010 13445532
Q ss_pred CCEEEEEECCC---CcEEEEEeccC-cce-----eeeeEEEEecCCE-EEEEEecC----CceeEEEEEEcCCCceeeee
Q 003791 153 KGCLHAVSSID---GEILWTRDFAA-ESV-----EVQQVIQLDESDQ-IYVVGYAG----SSQFHAYQINAMNGELLNHE 218 (795)
Q Consensus 153 ~g~l~ald~~t---G~~~W~~~~~~-~~~-----~~~~vv~s~~~~~-Vyvv~~~g----~~~~~v~ald~~tG~~~w~~ 218 (795)
+..++|||..+ .+++|++.... +.+ .| ++.. ..+++ +.+++ .| .....|+.+|++||.++|+.
T Consensus 163 G~~~yALDVT~P~~p~~LWe~~~~~~~~LG~t~s~P-~I~~-~~~g~w~~vfG-~GY~~~~~~~~Lyv~d~~tG~li~~i 239 (570)
T 3hx6_A 163 GKGLFALDVTDPANIKLLWEIGVDQEPDLGYSFPKP-TVAR-LHNGKWAVVTG-NGYSSMNDKAALLIIDMETGAITRKL 239 (570)
T ss_dssp CSEEEEEECSSGGGCEEEEEEETTTCTTCCBCCSCC-EEEE-CTTSSEEEEEE-CCBSCTTCCEEEEEEETTTCCEEEEE
T ss_pred CcEEEEEECCCCCCCceeEEECCCCccccCccccCC-EEEE-ecCCCEEEEEc-cccCCCCCccEEEEEECCCCceEEEE
Confidence 55899999876 88999998432 111 12 1221 12233 22222 22 12468999999999999988
Q ss_pred eeecc----CCcccceEEecC------cEEEEEECCCCeEEEEEeecCe
Q 003791 219 TAAFS----GGFVGDVALVSS------DTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 219 ~v~~~----~~~~~~~~~vg~------~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
..... .+++. +.+++. ..+++.|. .|+++.+||.+..
T Consensus 240 ~~~~~~~~~~Gls~-~~~~D~d~Dg~~D~~YaGDl-~GnlWRfDl~~~~ 286 (570)
T 3hx6_A 240 EVTGRTGVPNGLSS-PRLADNNSDGVADYAYAGDL-QGNLWRFDLIAGK 286 (570)
T ss_dssp EECCSTTSCCCEEE-EEEECTTSSSBCCEEEEEET-TSEEEEEECSCSS
T ss_pred ecCCCCccCCcccc-ceEEecCCCCceeEEEEEeC-CCcEEEEEcCCCC
Confidence 65432 23333 333421 36778885 5999999998754
No 144
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=96.41 E-value=0.22 Score=53.67 Aligned_cols=190 Identities=15% Similarity=0.164 Sum_probs=105.4
Q ss_pred CCEEEEEeCCCEEEEEECcCCccceEEEcCCc----ceeeeeeee-eCCEEEEEEccCCeEEEEeCC-CCcEeEEEeccC
Q 003791 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGIN----DVVDGIDIA-LGKYVITLSSDGSTLRAWNLP-DGQMVWESFLRG 126 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~----~~i~~l~~~-~g~~~V~Vs~~g~~v~A~d~~-tG~llWe~~~~~ 126 (795)
+..+++++.++.|...|.++|+.+-....... ..+..+... .++..++.++.++.|+.||.. ++..+-......
T Consensus 170 ~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~ 249 (380)
T 3iz6_a 170 ETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHE 249 (380)
T ss_dssp SSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCS
T ss_pred CCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcC
Confidence 34699999999999999999998766532211 122222111 234455545667899999997 456655554443
Q ss_pred ccccCCceeccccccccCCCeEEE-E-eCCEEEEEECCCCcEEEEEeccCcce-----eeeeEEEEecCCEEEEEEecCC
Q 003791 127 SKHSKPLLLVPTNLKVDKDSLILV-S-SKGCLHAVSSIDGEILWTRDFAAESV-----EVQQVIQLDESDQIYVVGYAGS 199 (795)
Q Consensus 127 ~~~s~~~~~~~~~~~~~~~~~V~V-~-~~g~l~ald~~tG~~~W~~~~~~~~~-----~~~~vv~s~~~~~Vyvv~~~g~ 199 (795)
... ....+.+ ++..++ . .||.+...|..+|+.+-.+....... ....+..+..+..++. +...+
T Consensus 250 ~~v-~~v~~~p-------~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~-g~~dg 320 (380)
T 3iz6_a 250 GDI-NSVKFFP-------DGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFA-GYSNG 320 (380)
T ss_dssp SCC-CEEEECT-------TSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEE-ECTTS
T ss_pred CCe-EEEEEec-------CCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEE-EECCC
Confidence 322 1222222 344444 4 48999999999999887765432110 0112222233444444 43333
Q ss_pred ceeEEEEEEcCCCceeeeeeeeccCCccc--ceEEe--cCcEEEEEECCCCeEEEEEeecC
Q 003791 200 SQFHAYQINAMNGELLNHETAAFSGGFVG--DVALV--SSDTLVTLDTTRSILVTVSFKNR 256 (795)
Q Consensus 200 ~~~~v~ald~~tG~~~w~~~v~~~~~~~~--~~~~v--g~~~lv~~d~~~~~L~v~~l~sg 256 (795)
.+..+|..+|+.+....... .+-.+ .++-. .+..++... ..+.+.+-++..+
T Consensus 321 ---~i~vwd~~~~~~~~~~~~~~-~~h~~~v~~l~~s~dg~~l~sgs-~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 321 ---DCYVWDTLLAEMVLNLGTLQ-NSHEGRISCLGLSSDGSALCTGS-WDKNLKIWAFSGH 376 (380)
T ss_dssp ---CEEEEETTTCCEEEEECCSC-SSCCCCCCEEEECSSSSEEEEEC-TTSCEEEEECCSS
T ss_pred ---CEEEEECCCCceEEEEeccc-CCCCCceEEEEECCCCCEEEEee-CCCCEEEEecCCC
Confidence 68889999998876542111 11111 22222 334554443 4567776666543
No 145
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=96.40 E-value=0.55 Score=48.61 Aligned_cols=183 Identities=6% Similarity=-0.006 Sum_probs=101.6
Q ss_pred CCCEEEEEeCCCEEEEEECcCCc----cceEEEcCCcceeeeeeeeeCCE-EEEEEccCCeEEEEeC-CCCcEeEEEec-
Q 003791 52 GRKRVVVSTEENVIASLDLRHGE----IFWRHVLGINDVVDGIDIALGKY-VITLSSDGSTLRAWNL-PDGQMVWESFL- 124 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~----ivWR~~l~~~~~i~~l~~~~g~~-~V~Vs~~g~~v~A~d~-~tG~llWe~~~- 124 (795)
+++.+++++.+|.|...|..+++ +...... ...+..+.....+. .++.++.++.|+.||. .+|+.. ....
T Consensus 22 ~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~-~~~~~ 98 (342)
T 1yfq_A 22 SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRY--KHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQ-ALTNN 98 (342)
T ss_dssp GGTEEEEEETTSEEEEEEEETTTTEEEEEEEEEC--SSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEE-ECBSC
T ss_pred CCCEEEEEcCCCeEEEEEeCCCCccccceeeeec--CCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceE-ecccc
Confidence 35679999999999999999888 4444332 22344443333444 5655666779999999 888762 2221
Q ss_pred -cCccccCCceeccccccccCCCeEEEE-eCCEEEEEECCC---------CcEEEEEeccCcceeeeeEEEEecCCEEEE
Q 003791 125 -RGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSID---------GEILWTRDFAAESVEVQQVIQLDESDQIYV 193 (795)
Q Consensus 125 -~~~~~s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~t---------G~~~W~~~~~~~~~~~~~vv~s~~~~~Vyv 193 (795)
... ....+ ....++.++.. .++.+...|..+ ++...+...+.. +..+ ...++.+++
T Consensus 99 ~~~~----~v~~l----~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~---v~~~--~~~~~~l~~ 165 (342)
T 1yfq_A 99 EANL----GICRI----CKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNK---IFTM--DTNSSRLIV 165 (342)
T ss_dssp CCCS----CEEEE----EEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCC---EEEE--EECSSEEEE
T ss_pred CCCC----ceEEE----EeCCCCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCc---eEEE--EecCCcEEE
Confidence 111 11111 11113444444 488888888877 665555442211 2222 234555555
Q ss_pred EEecCCceeEEEEEEcCC-Cceeeeeee-eccCCcccceEEe--cCcEEEEEECCCCeEEEEEeecC
Q 003791 194 VGYAGSSQFHAYQINAMN-GELLNHETA-AFSGGFVGDVALV--SSDTLVTLDTTRSILVTVSFKNR 256 (795)
Q Consensus 194 v~~~g~~~~~v~ald~~t-G~~~w~~~v-~~~~~~~~~~~~v--g~~~lv~~d~~~~~L~v~~l~sg 256 (795)
.+.+| .+..+|..+ +........ .....+. .+.+. .++.+++.. ..|.+.+.++..+
T Consensus 166 ~~~d~----~i~i~d~~~~~~~~~~~~~~~~~~~i~-~i~~~~~~~~~l~~~~-~dg~i~i~~~~~~ 226 (342)
T 1yfq_A 166 GMNNS----QVQWFRLPLCEDDNGTIEESGLKYQIR-DVALLPKEQEGYACSS-IDGRVAVEFFDDQ 226 (342)
T ss_dssp EESTT----EEEEEESSCCTTCCCEEEECSCSSCEE-EEEECSGGGCEEEEEE-TTSEEEEEECCTT
T ss_pred EeCCC----eEEEEECCccccccceeeecCCCCcee-EEEECCCCCCEEEEEe-cCCcEEEEEEcCC
Confidence 44444 788889988 765332221 1122221 12221 234555555 4678888777665
No 146
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=96.36 E-value=0.07 Score=57.36 Aligned_cols=198 Identities=6% Similarity=0.012 Sum_probs=104.5
Q ss_pred CCCEEEEEeCCCEEEEEECcC---CccceEEEcCCcceeeeeeeee-CCEEEEEEccCCeEEEEeCCCCc------EeEE
Q 003791 52 GRKRVVVSTEENVIASLDLRH---GEIFWRHVLGINDVVDGIDIAL-GKYVITLSSDGSTLRAWNLPDGQ------MVWE 121 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~t---G~ivWR~~l~~~~~i~~l~~~~-g~~~V~Vs~~g~~v~A~d~~tG~------llWe 121 (795)
+++.+++++.+|.|...|..+ |...-+........+..+.... ++..++.++.++.|+.||..+++ ....
T Consensus 78 ~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~ 157 (416)
T 2pm9_A 78 NNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLT 157 (416)
T ss_dssp SSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBC
T ss_pred CCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccc
Confidence 456788899999999999988 3322222222223344442222 24455556667899999999997 4433
Q ss_pred Eec---cCccccCCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEeccCc----ceeeeeEEEEecCCEEEE
Q 003791 122 SFL---RGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAE----SVEVQQVIQLDESDQIYV 193 (795)
Q Consensus 122 ~~~---~~~~~s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~~----~~~~~~vv~s~~~~~Vyv 193 (795)
... ..... ..+.+. .+....++.. .+|.+...|..+|+...+...... ......+.....+..+++
T Consensus 158 ~~~~~~~~~~v-~~~~~~-----~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 231 (416)
T 2pm9_A 158 PGQSMSSVDEV-ISLAWN-----QSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVA 231 (416)
T ss_dssp CCCSCCSSCCC-CEEEEC-----SSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEE
T ss_pred cccccCCCCCe-eEEEeC-----CCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEE
Confidence 211 11111 111111 1112334444 489999999999999888876521 111222322223333444
Q ss_pred EEecCCceeEEEEEEcCCCc-eeeeeeeeccCCcccceEEe--cCcEEEEEECCCCeEEEEEeecCe
Q 003791 194 VGYAGSSQFHAYQINAMNGE-LLNHETAAFSGGFVGDVALV--SSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 194 v~~~g~~~~~v~ald~~tG~-~~w~~~v~~~~~~~~~~~~v--g~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
.+..++....+..+|..++. ++..........+.. +.+. ++.++++.. ..+.+++-++.+++
T Consensus 232 ~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~-~~~s~~~~~~l~s~~-~dg~v~~wd~~~~~ 296 (416)
T 2pm9_A 232 TATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILS-LDWCHQDEHLLLSSG-RDNTVLLWNPESAE 296 (416)
T ss_dssp EEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEE-EEECSSCSSCEEEEE-SSSEEEEECSSSCC
T ss_pred EEECCCCCceEEEEeCCCCCCCcEEeecCccCceeE-EEeCCCCCCeEEEEe-CCCCEEEeeCCCCc
Confidence 44433211146777888874 333331011111211 2221 344555555 35889999998876
No 147
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=96.31 E-value=0.36 Score=52.96 Aligned_cols=189 Identities=15% Similarity=0.093 Sum_probs=96.4
Q ss_pred cCCCEEEEEeCCC---EEEEEECcCCccceEEEcCCcceeeeeeee-eCCEEEEEEcc--CCeEEEEeCCCCcEeEEEec
Q 003791 51 TGRKRVVVSTEEN---VIASLDLRHGEIFWRHVLGINDVVDGIDIA-LGKYVITLSSD--GSTLRAWNLPDGQMVWESFL 124 (795)
Q Consensus 51 ~~~~~v~vat~~g---~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~-~g~~~V~Vs~~--g~~v~A~d~~tG~llWe~~~ 124 (795)
++++.|+.++.++ .|...|.++|+.. +.......+...... .++.+++.++. ...|+.||..+|+.. +...
T Consensus 188 pdg~~la~~s~~~~~~~i~~~d~~tg~~~--~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~-~l~~ 264 (415)
T 2hqs_A 188 PDGSKLAYVTFESGRSALVIQTLANGAVR--QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR-QVTD 264 (415)
T ss_dssp TTSSEEEEEECTTSSCEEEEEETTTCCEE--EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-ECCC
T ss_pred CCCCEEEEEEecCCCcEEEEEECCCCcEE--EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEE-eCcC
Confidence 4566777777664 9999999999875 222222223332222 34445555443 246999999999863 2111
Q ss_pred cCccccCCceeccccccccCCCeEEEEe--CC--EEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCc
Q 003791 125 RGSKHSKPLLLVPTNLKVDKDSLILVSS--KG--CLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSS 200 (795)
Q Consensus 125 ~~~~~s~~~~~~~~~~~~~~~~~V~V~~--~g--~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~ 200 (795)
..... ..+.+. .+ ++.+++.+ ++ .|+.+|..+|+..-. .... . ....+..+..+..+++.+..++
T Consensus 265 ~~~~~-~~~~~s-----pd-g~~l~~~s~~~g~~~i~~~d~~~~~~~~l-~~~~-~-~~~~~~~spdG~~l~~~~~~~g- 333 (415)
T 2hqs_A 265 GRSNN-TEPTWF-----PD-SQNLAFTSDQAGRPQVYKVNINGGAPQRI-TWEG-S-QNQDADVSSDGKFMVMVSSNGG- 333 (415)
T ss_dssp CSSCE-EEEEEC-----TT-SSEEEEEECTTSSCEEEEEETTSSCCEEC-CCSS-S-EEEEEEECTTSSEEEEEEECSS-
T ss_pred CCCcc-cceEEC-----CC-CCEEEEEECCCCCcEEEEEECCCCCEEEE-ecCC-C-cccCeEECCCCCEEEEEECcCC-
Confidence 11111 111111 12 23344443 23 789999888874321 1111 1 1222322344555665554422
Q ss_pred eeEEEEEEcCCCceeeeeeeeccCCcccceEEe-cCcEEEEEECCCC--eEEEEEeecCe
Q 003791 201 QFHAYQINAMNGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRS--ILVTVSFKNRK 257 (795)
Q Consensus 201 ~~~v~ald~~tG~~~w~~~v~~~~~~~~~~~~v-g~~~lv~~d~~~~--~L~v~~l~sg~ 257 (795)
...+..+|+.+|+... +.....+ ..+.+- .+..++....+.+ .|++.++..+.
T Consensus 334 ~~~i~~~d~~~~~~~~---l~~~~~~-~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~ 389 (415)
T 2hqs_A 334 QQHIAKQDLATGGVQV---LSSTFLD-ETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRF 389 (415)
T ss_dssp CEEEEEEETTTCCEEE---CCCSSSC-EEEEECTTSSEEEEEEEETTEEEEEEEETTSCC
T ss_pred ceEEEEEECCCCCEEE---ecCCCCc-CCeEEcCCCCEEEEEEcCCCccEEEEEECCCCc
Confidence 3478889999998732 1111111 122222 3344444433333 68888876544
No 148
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.22 E-value=0.15 Score=51.41 Aligned_cols=145 Identities=10% Similarity=0.035 Sum_probs=79.3
Q ss_pred CCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEc-cCCeEEEEeCCCCcEeEEEeccCccccC
Q 003791 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSS-DGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~-~g~~v~A~d~~tG~llWe~~~~~~~~s~ 131 (795)
++.+|+++.++.|..+|+.+ ...+...........++. ...++.++++. .++.|+.|+..++...+.. ... . .
T Consensus 77 ~g~l~v~~~~~~i~~~d~~~-~~~~~~~~~~~~~p~~i~-~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~--~~~-~-~ 150 (270)
T 1rwi_B 77 AGTVYVTDFNNRVVTLAAGS-NNQTVLPFDGLNYPEGLA-VDTQGAVYVADRGNNRVVKLAAGSKTQTVLP--FTG-L-N 150 (270)
T ss_dssp TCCEEEEETTTEEEEECTTC-SCCEECCCCSCSSEEEEE-ECTTCCEEEEEGGGTEEEEECTTCCSCEECC--CCS-C-C
T ss_pred CCCEEEEcCCCEEEEEeCCC-ceEeeeecCCcCCCcceE-ECCCCCEEEEECCCCEEEEEECCCceeEeec--ccc-C-C
Confidence 55699998888999999864 445544332212233342 22344466653 4568999987665543321 111 1 0
Q ss_pred CceeccccccccCCCeEEEEe--CCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEc
Q 003791 132 PLLLVPTNLKVDKDSLILVSS--KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINA 209 (795)
Q Consensus 132 ~~~~~~~~~~~~~~~~V~V~~--~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~ 209 (795)
.+. ....+.++.+++.. ++.|+.+|..++..... ..... ..+..+. ...++.+|+....++ .+..+|+
T Consensus 151 ~p~----~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~-~~~~~-~~p~~i~-~d~~g~l~v~~~~~~---~v~~~~~ 220 (270)
T 1rwi_B 151 DPD----GVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVL-PFTDI-TAPWGIA-VDEAGTVYVTEHNTN---QVVKLLA 220 (270)
T ss_dssp SCC----CEEECTTCCEEEEEGGGTEEEEECTTTCCEEEC-CCSSC-CSEEEEE-ECTTCCEEEEETTTS---CEEEECT
T ss_pred Cce----eEEEeCCCCEEEEECCCCEEEEEecCCCceEee-cccCC-CCceEEE-ECCCCCEEEEECCCC---cEEEEcC
Confidence 000 11233356677763 68999999877765432 11111 1233443 234568888665433 5788888
Q ss_pred CCCc
Q 003791 210 MNGE 213 (795)
Q Consensus 210 ~tG~ 213 (795)
.++.
T Consensus 221 ~~~~ 224 (270)
T 1rwi_B 221 GSTT 224 (270)
T ss_dssp TCSC
T ss_pred CCCc
Confidence 6543
No 149
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.21 E-value=0.38 Score=50.41 Aligned_cols=200 Identities=7% Similarity=-0.045 Sum_probs=101.3
Q ss_pred CCEEEEEeCCCEEEEEECcCCccceEEEcCC-cceeeeeeeeeC--CEEEEEEccCCeEEEEeCCCCcEe--EEEeccCc
Q 003791 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGI-NDVVDGIDIALG--KYVITLSSDGSTLRAWNLPDGQMV--WESFLRGS 127 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~-~~~i~~l~~~~g--~~~V~Vs~~g~~v~A~d~~tG~ll--We~~~~~~ 127 (795)
++.+++++.+|.|...|.++|+..-...+.. ...+..+..... +..++.++.++.++.||..++... ........
T Consensus 69 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~ 148 (379)
T 3jrp_A 69 GTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAI 148 (379)
T ss_dssp CSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTT
T ss_pred CCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCC
Confidence 5679999999999999999997222222221 223443322222 445555666789999999988432 22222221
Q ss_pred cccCCceecccccc------cc-CCCeEEEE-eCCEEEEEECCCCcEEEEEec--cCcceeeeeEEEEecC--CEEEEEE
Q 003791 128 KHSKPLLLVPTNLK------VD-KDSLILVS-SKGCLHAVSSIDGEILWTRDF--AAESVEVQQVIQLDES--DQIYVVG 195 (795)
Q Consensus 128 ~~s~~~~~~~~~~~------~~-~~~~V~V~-~~g~l~ald~~tG~~~W~~~~--~~~~~~~~~vv~s~~~--~~Vyvv~ 195 (795)
.. ..+...+.... .. ....+++. .+|.++..|..+++..|.... .........+..+..+ +..++.+
T Consensus 149 ~v-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~ 227 (379)
T 3jrp_A 149 GV-NSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASV 227 (379)
T ss_dssp CE-EEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEE
T ss_pred ce-EEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEE
Confidence 11 11111110000 00 12344444 388899999888876655432 1111112223222231 3444444
Q ss_pred ecCCceeEEEEEEcCCCceeeeeeeeccCCcccc---eEEe-cCcEEEEEECCCCeEEEEEeecCe
Q 003791 196 YAGSSQFHAYQINAMNGELLNHETAAFSGGFVGD---VALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 196 ~~g~~~~~v~ald~~tG~~~w~~~v~~~~~~~~~---~~~v-g~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
...+ .+..+|..+|+..+...+......... +.+- .+..+++... .|.+++-++..+.
T Consensus 228 ~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-dg~i~iw~~~~~~ 289 (379)
T 3jrp_A 228 SQDR---TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG-DNKVTLWKENLEG 289 (379)
T ss_dssp ETTS---CEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEES-SSSEEEEEEEETT
T ss_pred eCCC---EEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecC-CCcEEEEeCCCCC
Confidence 3322 577788888865544433222112121 1221 3345555543 5888888888643
No 150
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=96.20 E-value=0.4 Score=51.18 Aligned_cols=72 Identities=10% Similarity=0.101 Sum_probs=47.3
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeee-eCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCc
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIA-LGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGS 127 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~-~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~ 127 (795)
++..+.++++++ +.-.|..+++...+.....- ...... .++.++++++.++.|+.||..+|+.+-+.....+
T Consensus 30 dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~~~~~ 102 (355)
T 3vu4_A 30 DQSCLILSTLKS-FEIYNVHPVAHIMSQEMRHL---SKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIKVDAP 102 (355)
T ss_dssp TSSEEEEECSSE-EEEEEETTEEEEEEEECSCC---CEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEECSSC
T ss_pred CCCEEEEEcCCE-EEEEecCCcceeeeeecCCe---EEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEECCCc
Confidence 355566666665 45778888888887766432 212112 3444545566567999999999999988876543
No 151
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.16 E-value=1.1 Score=46.86 Aligned_cols=173 Identities=8% Similarity=-0.037 Sum_probs=94.0
Q ss_pred CCCEEEEEeCC------------CEEEEEECcCCccceEEEcCCcceeee-eeeeeCCEEEEEEccC--------CeEEE
Q 003791 52 GRKRVVVSTEE------------NVIASLDLRHGEIFWRHVLGINDVVDG-IDIALGKYVITLSSDG--------STLRA 110 (795)
Q Consensus 52 ~~~~v~vat~~------------g~l~ALn~~tG~ivWR~~l~~~~~i~~-l~~~~g~~~V~Vs~~g--------~~v~A 110 (795)
.+++||+.... +.+..+|+.+++ |+..-+.+..-.. .....++.+++++|.+ ..+..
T Consensus 44 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~--W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~ 121 (315)
T 4asc_A 44 KENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSE--WLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMC 121 (315)
T ss_dssp TTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTE--EEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEE
T ss_pred ECCEEEEEcCcccCCCCCccccccceEEecCCCCe--EEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEE
Confidence 36667765541 238899999875 9875433321111 1123566666666621 45899
Q ss_pred EeCCCCcEeEEEeccCccccCCceeccccccccCCCeEEEEeC--------CEEEEEECCCCcEEEEEeccCcce-eeee
Q 003791 111 WNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSSK--------GCLHAVSSIDGEILWTRDFAAESV-EVQQ 181 (795)
Q Consensus 111 ~d~~tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~~~--------g~l~ald~~tG~~~W~~~~~~~~~-~~~~ 181 (795)
+|+.+++ |+....-+........ .. .++.+++.++ ..+.++|..+. .|+.-.+.+.- ....
T Consensus 122 ~d~~~~~--W~~~~~~p~~r~~~~~-----~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~ 191 (315)
T 4asc_A 122 YDRLSFK--WGESDPLPYVVYGHTV-----LS-HMDLVYVIGGKGSDRKCLNKMCVYDPKKF--EWKELAPMQTARSLFG 191 (315)
T ss_dssp EETTTTE--EEECCCCSSCCBSCEE-----EE-ETTEEEEECCBCTTSCBCCCEEEEETTTT--EEEECCCCSSCCBSCE
T ss_pred ECCCCCc--EeECCCCCCcccceeE-----EE-ECCEEEEEeCCCCCCcccceEEEEeCCCC--eEEECCCCCCchhceE
Confidence 9998885 8865332211011111 11 2566777531 46899998876 58764433221 0111
Q ss_pred EEEEecCCEEEEEEecCC--ceeEEEEEEcCCCceeeeeeeeccCCccc-ceEEecCcEEEE
Q 003791 182 VIQLDESDQIYVVGYAGS--SQFHAYQINAMNGELLNHETAAFSGGFVG-DVALVSSDTLVT 240 (795)
Q Consensus 182 vv~s~~~~~Vyvv~~~g~--~~~~v~ald~~tG~~~w~~~v~~~~~~~~-~~~~vg~~~lv~ 240 (795)
+ ...++.+|++|-..+ ..-.+..+|+.++ .|+..-..|..... .++..++.+++.
T Consensus 192 ~--~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~~~~l~v~ 249 (315)
T 4asc_A 192 A--TVHDGRIIVAAGVTDTGLTSSAEVYSITDN--KWAPFEAFPQERSSLSLVSLVGTLYAI 249 (315)
T ss_dssp E--EEETTEEEEEEEECSSSEEEEEEEEETTTT--EEEEECCCSSCCBSCEEEEETTEEEEE
T ss_pred E--EEECCEEEEEeccCCCCccceEEEEECCCC--eEEECCCCCCcccceeEEEECCEEEEE
Confidence 2 235788998875432 1236888999887 67765444444433 233334444443
No 152
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=96.15 E-value=1.3 Score=45.32 Aligned_cols=144 Identities=12% Similarity=-0.000 Sum_probs=73.2
Q ss_pred EEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEcc-CCeEEEEeCCCCcEeEEEeccCccccCCc
Q 003791 55 RVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSD-GSTLRAWNLPDGQMVWESFLRGSKHSKPL 133 (795)
Q Consensus 55 ~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~-g~~v~A~d~~tG~llWe~~~~~~~~s~~~ 133 (795)
.+++.+..+.|..+|+++| .+........+.++. ...++.++++.. ++.|+.||+.+|+...-........
T Consensus 42 l~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~l~-~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~---- 113 (296)
T 3e5z_A 42 VIFSDVRQNRTWAWSDDGQ---LSPEMHPSHHQNGHC-LNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKK---- 113 (296)
T ss_dssp EEEEEGGGTEEEEEETTSC---EEEEESSCSSEEEEE-ECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEE----
T ss_pred EEEEeCCCCEEEEEECCCC---eEEEECCCCCcceee-ECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCC----
Confidence 3556677899999999988 232222222233442 223344555543 4789999999998764432211100
Q ss_pred eeccccccccCCCeEEEEe-------------------CCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEE
Q 003791 134 LLVPTNLKVDKDSLILVSS-------------------KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVV 194 (795)
Q Consensus 134 ~~~~~~~~~~~~~~V~V~~-------------------~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv 194 (795)
...+.....+.++.+++.. .+.|++++.. |+..-.... ...+..+.. ..++..++.
T Consensus 114 ~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~---~~~~~gi~~-s~dg~~lv~ 188 (296)
T 3e5z_A 114 LNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRD---RVKPNGLAF-LPSGNLLVS 188 (296)
T ss_dssp CCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECC---CSSEEEEEE-CTTSCEEEE
T ss_pred CCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecC---CCCCccEEE-CCCCCEEEE
Confidence 0000011233356666631 3578888876 665432211 111223322 234444443
Q ss_pred EecCCceeEEEEEEcC-CCce
Q 003791 195 GYAGSSQFHAYQINAM-NGEL 214 (795)
Q Consensus 195 ~~~g~~~~~v~ald~~-tG~~ 214 (795)
....+ .+..+|.. +|+.
T Consensus 189 ~~~~~---~i~~~~~~~~g~~ 206 (296)
T 3e5z_A 189 DTGDN---ATHRYCLNARGET 206 (296)
T ss_dssp ETTTT---EEEEEEECSSSCE
T ss_pred eCCCC---eEEEEEECCCCcC
Confidence 33322 57777765 6776
No 153
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.15 E-value=1.7 Score=45.98 Aligned_cols=151 Identities=10% Similarity=0.072 Sum_probs=89.0
Q ss_pred CCEEEEEeCCCEEEEEECcCCccceEEEcCCc--ceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCcccc
Q 003791 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGIN--DVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHS 130 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~--~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s 130 (795)
.+.+++++.++.|.-.|.++ +..-....... ..+..+.....+..++.++.++.|+.||. +|+.++.........
T Consensus 131 ~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v- 207 (383)
T 3ei3_B 131 TNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKV- 207 (383)
T ss_dssp EEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCE-
T ss_pred CCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcE-
Confidence 35688899999999999985 33333322221 22333322334445555666789999998 799988887654332
Q ss_pred CCceeccccccccCCC-eEEEE-eCCEEEEEECCC----CcEEEEEeccCcceeeeeEEEEe-cCCEEEEEEecCCceeE
Q 003791 131 KPLLLVPTNLKVDKDS-LILVS-SKGCLHAVSSID----GEILWTRDFAAESVEVQQVIQLD-ESDQIYVVGYAGSSQFH 203 (795)
Q Consensus 131 ~~~~~~~~~~~~~~~~-~V~V~-~~g~l~ald~~t----G~~~W~~~~~~~~~~~~~vv~s~-~~~~Vyvv~~~g~~~~~ 203 (795)
..+.+.+ + .. .++.. .++.+...|..+ +...-....... ...+..+. .+..++..+.+| .
T Consensus 208 ~~~~~~~-----~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~---v~~~~~s~~~~~~l~~~~~d~----~ 274 (383)
T 3ei3_B 208 THAEFNP-----R-CDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKP---VNAAYFNPTDSTKLLTTDQRN----E 274 (383)
T ss_dssp EEEEECS-----S-CTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSC---EEEEEECTTTSCEEEEEESSS----E
T ss_pred EEEEECC-----C-CCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCc---eEEEEEcCCCCCEEEEEcCCC----c
Confidence 1222222 2 22 34444 389999999988 666655532221 22232223 334454444444 7
Q ss_pred EEEEEcCCCceeeeee
Q 003791 204 AYQINAMNGELLNHET 219 (795)
Q Consensus 204 v~ald~~tG~~~w~~~ 219 (795)
+..+|..+|+......
T Consensus 275 i~iwd~~~~~~~~~~~ 290 (383)
T 3ei3_B 275 IRVYSSYDWSKPDQII 290 (383)
T ss_dssp EEEEETTBTTSCSEEE
T ss_pred EEEEECCCCccccccc
Confidence 8899999998875543
No 154
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=96.06 E-value=1.5 Score=44.60 Aligned_cols=110 Identities=14% Similarity=0.147 Sum_probs=66.9
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcC---Ccceeeeeeeee--CCEEEEEEccCCeEEEEeCCCC---------c
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLG---INDVVDGIDIAL--GKYVITLSSDGSTLRAWNLPDG---------Q 117 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~---~~~~i~~l~~~~--g~~~V~Vs~~g~~v~A~d~~tG---------~ 117 (795)
+++.+++++.+|.|.-.|..++...|+.... ....+..+.... ++..++.++.++.|+.||..+| +
T Consensus 22 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~ 101 (351)
T 3f3f_A 22 YGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWN 101 (351)
T ss_dssp SSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEE
T ss_pred CCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcc
Confidence 4667999999999999999998877765431 222344442222 2445555666679999999998 3
Q ss_pred EeEEEeccCccccCCceeccccccccC-CCeEEEE-eCCEEEEEECCCCcEE
Q 003791 118 MVWESFLRGSKHSKPLLLVPTNLKVDK-DSLILVS-SKGCLHAVSSIDGEIL 167 (795)
Q Consensus 118 llWe~~~~~~~~s~~~~~~~~~~~~~~-~~~V~V~-~~g~l~ald~~tG~~~ 167 (795)
.+.......... ..+.+.+ +. ...++.. .+|.+...|..+++..
T Consensus 102 ~~~~~~~~~~~v-~~~~~~~-----~~~~~~l~~~~~dg~v~iwd~~~~~~~ 147 (351)
T 3f3f_A 102 KLCTLNDSKGSL-YSVKFAP-----AHLGLKLACLGNDGILRLYDALEPSDL 147 (351)
T ss_dssp EEEEECCCSSCE-EEEEECC-----GGGCSEEEEEETTCEEEEEECSSTTCT
T ss_pred eeeeecccCCce-eEEEEcC-----CCCCcEEEEecCCCcEEEecCCChHHh
Confidence 444444333222 1111211 11 2334444 4899999999988754
No 155
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=96.03 E-value=0.42 Score=51.78 Aligned_cols=68 Identities=9% Similarity=0.188 Sum_probs=40.4
Q ss_pred CCCEEEEEeCCCEEEEEECcCCcc-------ceE--EEcC-Cc------------ceeeeeeeeeCC--EEEEEEccCCe
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEI-------FWR--HVLG-IN------------DVVDGIDIALGK--YVITLSSDGST 107 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~i-------vWR--~~l~-~~------------~~i~~l~~~~g~--~~V~Vs~~g~~ 107 (795)
+++.+++++.+|.|.-.|..+|+. .|+ ..+. .. ..+..+.....+ ..++.++.++.
T Consensus 39 ~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~ 118 (447)
T 3dw8_B 39 SGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKT 118 (447)
T ss_dssp SSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSC
T ss_pred CCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCe
Confidence 467799999999999999998872 121 1121 11 223333222222 34555666789
Q ss_pred EEEEeCCCCcEe
Q 003791 108 LRAWNLPDGQMV 119 (795)
Q Consensus 108 v~A~d~~tG~ll 119 (795)
|+.||..++...
T Consensus 119 i~iw~~~~~~~~ 130 (447)
T 3dw8_B 119 IKLWKISERDKR 130 (447)
T ss_dssp EEEEEEEEEEEE
T ss_pred EEEEecccccCC
Confidence 999999887654
No 156
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=96.03 E-value=0.11 Score=55.86 Aligned_cols=190 Identities=9% Similarity=0.025 Sum_probs=107.8
Q ss_pred CCEEEEEeCCCEEEEEECcCCc------cceEEEc--CCcceeeeeeeeeC-CEEEEEEccCCeEEEEeCCCCcEeEEEe
Q 003791 53 RKRVVVSTEENVIASLDLRHGE------IFWRHVL--GINDVVDGIDIALG-KYVITLSSDGSTLRAWNLPDGQMVWESF 123 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~------ivWR~~l--~~~~~i~~l~~~~g-~~~V~Vs~~g~~v~A~d~~tG~llWe~~ 123 (795)
.+.+++++.+|.|...|.++++ ...+... .....+..+..... +..++.++.++.|+.||..+|+.+.+..
T Consensus 126 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~ 205 (416)
T 2pm9_A 126 DNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLS 205 (416)
T ss_dssp TTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEe
Confidence 5568899999999999999997 4443211 11122333322222 4566656667899999999999998887
Q ss_pred ccC------ccccCCceeccccccccCCCeEEEEe-CC---EEEEEECCCC-cEEEEEe-ccCcceeeeeEEEEe-cCCE
Q 003791 124 LRG------SKHSKPLLLVPTNLKVDKDSLILVSS-KG---CLHAVSSIDG-EILWTRD-FAAESVEVQQVIQLD-ESDQ 190 (795)
Q Consensus 124 ~~~------~~~s~~~~~~~~~~~~~~~~~V~V~~-~g---~l~ald~~tG-~~~W~~~-~~~~~~~~~~vv~s~-~~~~ 190 (795)
... ... ..+.+. .++...++..+ ++ .+..+|..++ ++..... ..... +..+..+. .+..
T Consensus 206 ~~~~~~~~~~~v-~~~~~~-----~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~--v~~~~~s~~~~~~ 277 (416)
T 2pm9_A 206 YTSPNSGIKQQL-SVVEWH-----PKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKG--ILSLDWCHQDEHL 277 (416)
T ss_dssp CCCCSSCCCCCE-EEEEEC-----SSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSC--EEEEEECSSCSSC
T ss_pred ccccccccCCce-EEEEEC-----CCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCc--eeEEEeCCCCCCe
Confidence 652 111 111111 12112344443 66 8999999887 4444443 11111 22232222 3334
Q ss_pred EEEEEecCCceeEEEEEEcCCCceeeeeeeeccCCcccceEEe-cC-cEEEEEECCCCeEEEEEeecCe
Q 003791 191 IYVVGYAGSSQFHAYQINAMNGELLNHETAAFSGGFVGDVALV-SS-DTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 191 Vyvv~~~g~~~~~v~ald~~tG~~~w~~~v~~~~~~~~~~~~v-g~-~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
++..+.+| .+..+|..+|+.+.+.... ...+. .+.+. .+ .++++.. ..+.+++-++.++.
T Consensus 278 l~s~~~dg----~v~~wd~~~~~~~~~~~~~-~~~v~-~~~~s~~~~~~l~s~~-~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 278 LLSSGRDN----TVLLWNPESAEQLSQFPAR-GNWCF-KTKFAPEAPDLFACAS-FDNKIEVQTLQNLT 339 (416)
T ss_dssp EEEEESSS----EEEEECSSSCCEEEEEECS-SSCCC-CEEECTTCTTEEEECC-SSSEEEEEESCCCC
T ss_pred EEEEeCCC----CEEEeeCCCCccceeecCC-CCceE-EEEECCCCCCEEEEEe-cCCcEEEEEccCCC
Confidence 44444444 7888999999988766421 11222 22232 22 4555544 45788888887765
No 157
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=96.02 E-value=3.1 Score=47.78 Aligned_cols=110 Identities=13% Similarity=0.054 Sum_probs=64.3
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEc------CCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEecc
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVL------GINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLR 125 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l------~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~ 125 (795)
+++.++.++.++.|.-.|.++|+..-.... ...+.+..+....++..++.++.++.++.||..+|+.+-+....
T Consensus 201 dg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~ 280 (611)
T 1nr0_A 201 DGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVG 280 (611)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred CCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCC
Confidence 466788899999999999999986543211 11223444322223334443555679999999999988776654
Q ss_pred CccccCCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEE
Q 003791 126 GSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEIL 167 (795)
Q Consensus 126 ~~~~s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~ 167 (795)
.... .....+ ..+ .+.++.. .++.+...|..+|+..
T Consensus 281 ~~~~-~~~~~~----~~~-~~~l~s~s~d~~i~~~~~~~~~~~ 317 (611)
T 1nr0_A 281 TRIE-DQQLGI----IWT-KQALVSISANGFINFVNPELGSID 317 (611)
T ss_dssp SSGG-GCEEEE----EEC-SSCEEEEETTCCEEEEETTTTEEE
T ss_pred CCcc-ceeEEE----EEc-CCEEEEEeCCCcEEEEeCCCCCcc
Confidence 2211 000001 111 2333333 4777777777777643
No 158
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=95.98 E-value=2.4 Score=49.37 Aligned_cols=192 Identities=13% Similarity=0.048 Sum_probs=105.6
Q ss_pred cCCCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCcccc
Q 003791 51 TGRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHS 130 (795)
Q Consensus 51 ~~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s 130 (795)
++++.+++++.+|.|.-.|.++|+...+..--. ..+..+.....+..++.++.++.|+.||... ...+..........
T Consensus 440 ~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~-~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~-~~~~~~~~~~~~h~ 517 (694)
T 3dm0_A 440 SDGQFALSGSWDGELRLWDLAAGVSTRRFVGHT-KDVLSVAFSLDNRQIVSASRDRTIKLWNTLG-ECKYTISEGGEGHR 517 (694)
T ss_dssp TTSSEEEEEETTSEEEEEETTTTEEEEEEECCS-SCEEEEEECTTSSCEEEEETTSCEEEECTTS-CEEEEECSSTTSCS
T ss_pred CCCCEEEEEeCCCcEEEEECCCCcceeEEeCCC-CCEEEEEEeCCCCEEEEEeCCCEEEEEECCC-CcceeeccCCCCCC
Confidence 346678999999999999999998876654322 2344432223333444355567999999754 44444432211110
Q ss_pred CCceeccccccccCCC-eEEEE-eCCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEE
Q 003791 131 KPLLLVPTNLKVDKDS-LILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQIN 208 (795)
Q Consensus 131 ~~~~~~~~~~~~~~~~-~V~V~-~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald 208 (795)
.....+.. ..+... .++.. .++.+...|..+++..-+........ ..+..+..+..+...+.+| .+...|
T Consensus 518 ~~v~~~~~--~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v--~~v~~spdg~~l~sg~~Dg----~i~iwd 589 (694)
T 3dm0_A 518 DWVSCVRF--SPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYV--STVAVSPDGSLCASGGKDG----VVLLWD 589 (694)
T ss_dssp SCEEEEEE--CSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCE--EEEEECTTSSEEEEEETTS----BCEEEE
T ss_pred CcEEEEEE--eCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCE--EEEEEeCCCCEEEEEeCCC----eEEEEE
Confidence 11111110 111112 23333 38999999999998877665433322 2222122333444433344 678889
Q ss_pred cCCCceeeeeeeeccCCcccceEEe-cCcEEEEEECCCCeEEEEEeecCe
Q 003791 209 AMNGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 209 ~~tG~~~w~~~v~~~~~~~~~~~~v-g~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
..+|+.+.... ....+.. +.+- ++..+++.. .+.+++-|+.+++
T Consensus 590 ~~~~~~~~~~~--~~~~v~~-~~~sp~~~~l~~~~--~~~i~iwd~~~~~ 634 (694)
T 3dm0_A 590 LAEGKKLYSLE--ANSVIHA-LCFSPNRYWLCAAT--EHGIKIWDLESKS 634 (694)
T ss_dssp TTTTEEEECCB--CSSCEEE-EEECSSSSEEEEEE--TTEEEEEETTTTE
T ss_pred CCCCceEEEec--CCCcEEE-EEEcCCCcEEEEEc--CCCEEEEECCCCC
Confidence 99998876553 1222221 2222 233444443 3568889998887
No 159
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=95.93 E-value=1.8 Score=46.04 Aligned_cols=157 Identities=11% Similarity=0.098 Sum_probs=82.8
Q ss_pred cCCCEEEEEeCCCEEEEEECc-CCccceEEEcCCcceeeeeeeeeCCE--EEEEEc-------------cCCeEEEEeCC
Q 003791 51 TGRKRVVVSTEENVIASLDLR-HGEIFWRHVLGINDVVDGIDIALGKY--VITLSS-------------DGSTLRAWNLP 114 (795)
Q Consensus 51 ~~~~~v~vat~~g~l~ALn~~-tG~ivWR~~l~~~~~i~~l~~~~g~~--~V~Vs~-------------~g~~v~A~d~~ 114 (795)
++++.+|+++.+ .+..+|.. +|++.........+....+....++. .++++. .++.++.|+..
T Consensus 49 pdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~ 127 (365)
T 1jof_A 49 HERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVS 127 (365)
T ss_dssp TTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEEC
T ss_pred CCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccC
Confidence 345679988887 88888887 89875433222111111221122334 234332 46789999987
Q ss_pred -CCcEeEEEecc---CccccCCceeccccccccCCCeEEEEe--CCEEEEEECC-CCcEEE--EEeccCcceeeeeEEEE
Q 003791 115 -DGQMVWESFLR---GSKHSKPLLLVPTNLKVDKDSLILVSS--KGCLHAVSSI-DGEILW--TRDFAAESVEVQQVIQL 185 (795)
Q Consensus 115 -tG~llWe~~~~---~~~~s~~~~~~~~~~~~~~~~~V~V~~--~g~l~ald~~-tG~~~W--~~~~~~~~~~~~~vv~s 185 (795)
+|++.=..... .......+.+ ..+ ++.+++.. ++.++.++.. +|+..- +...+.....|..+..+
T Consensus 128 ~~g~~~~~~~~~~~~~~~~~~~~~~-----spd-G~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~s 201 (365)
T 1jof_A 128 ETGKLEKNVQNYEYQENTGIHGMVF-----DPT-ETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMH 201 (365)
T ss_dssp TTCCEEEEEEEEECCTTCCEEEEEE-----CTT-SSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEEC
T ss_pred CCCcCcceEeeEEeCCCCcceEEEE-----CCC-CCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEEC
Confidence 68765332211 1110011111 122 24566653 6789999988 898643 23322211225455434
Q ss_pred ecCCEEEEEEecCCceeEEEEEEcCCCcee
Q 003791 186 DESDQIYVVGYAGSSQFHAYQINAMNGELL 215 (795)
Q Consensus 186 ~~~~~Vyvv~~~g~~~~~v~ald~~tG~~~ 215 (795)
.++..+|+.+.. +..+.++.+|..+|+..
T Consensus 202 pdg~~l~v~~~~-~~~v~v~~~~~~~g~~~ 230 (365)
T 1jof_A 202 PTGNYLYALMEA-GNRICEYVIDPATHMPV 230 (365)
T ss_dssp TTSSEEEEEETT-TTEEEEEEECTTTCCEE
T ss_pred CCCCEEEEEECC-CCeEEEEEEeCCCCcEE
Confidence 445567775533 23455666677789864
No 160
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=95.88 E-value=1.3 Score=45.75 Aligned_cols=148 Identities=11% Similarity=0.058 Sum_probs=77.0
Q ss_pred CCEEEEEe-CCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccC
Q 003791 53 RKRVVVST-EENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (795)
Q Consensus 53 ~~~v~vat-~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~ 131 (795)
++.+|+.+ ..+.|..+|+++|+.. ...++. .+.++.....+. ++++. +..|+.||..+|+...-........
T Consensus 24 ~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~~~--~~~~i~~~~dG~-l~v~~-~~~l~~~d~~~g~~~~~~~~~~~~~-- 96 (297)
T 3g4e_A 24 SNSLLFVDIPAKKVCRWDSFTKQVQ-RVTMDA--PVSSVALRQSGG-YVATI-GTKFCALNWKEQSAVVLATVDNDKK-- 96 (297)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCEE-EEECSS--CEEEEEEBTTSS-EEEEE-TTEEEEEETTTTEEEEEEECCTTCS--
T ss_pred CCEEEEEECCCCEEEEEECCCCcEE-EEeCCC--ceEEEEECCCCC-EEEEE-CCeEEEEECCCCcEEEEEecCCCCC--
Confidence 56677665 5789999999998762 222322 233442222333 55555 4589999999998764443321110
Q ss_pred CceeccccccccCCCeEEEEe-------------CCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecC
Q 003791 132 PLLLVPTNLKVDKDSLILVSS-------------KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAG 198 (795)
Q Consensus 132 ~~~~~~~~~~~~~~~~V~V~~-------------~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g 198 (795)
...+.....+.++.+++.. .+.|++++.. |+..-..... ..+..+..+..+..+|+.....
T Consensus 97 --~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~~~---~~pngi~~spdg~~lyv~~~~~ 170 (297)
T 3g4e_A 97 --NNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYFDQV---DISNGLDWSLDHKIFYYIDSLS 170 (297)
T ss_dssp --SEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEEEEE---SBEEEEEECTTSCEEEEEEGGG
T ss_pred --CCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEEEeecc---ccccceEEcCCCCEEEEecCCC
Confidence 0001111334456677642 2478888864 5543211110 0122332233455688765433
Q ss_pred CceeEEEEEE--cCCCceee
Q 003791 199 SSQFHAYQIN--AMNGELLN 216 (795)
Q Consensus 199 ~~~~~v~ald--~~tG~~~w 216 (795)
+ ++..+| +.+|....
T Consensus 171 ~---~i~~~~~d~~~G~~~~ 187 (297)
T 3g4e_A 171 Y---SVDAFDYDLQTGQISN 187 (297)
T ss_dssp T---EEEEEEECTTTCCEEE
T ss_pred C---cEEEEeccCCCCcccC
Confidence 2 455555 57887643
No 161
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=95.84 E-value=0.96 Score=49.42 Aligned_cols=186 Identities=12% Similarity=-0.023 Sum_probs=98.7
Q ss_pred CEEEEEeCCCEEEEEECcC----------CccceEEEcCCcceeeeeeee-eCCEEEEEEccCCeEEEEeCCCCcE-eEE
Q 003791 54 KRVVVSTEENVIASLDLRH----------GEIFWRHVLGINDVVDGIDIA-LGKYVITLSSDGSTLRAWNLPDGQM-VWE 121 (795)
Q Consensus 54 ~~v~vat~~g~l~ALn~~t----------G~ivWR~~l~~~~~i~~l~~~-~g~~~V~Vs~~g~~v~A~d~~tG~l-lWe 121 (795)
..+++++.+|.|...|..+ ++...+..-... .+..+... .+.+.++.++.++.|+.||..++.. .+.
T Consensus 142 ~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 220 (430)
T 2xyi_A 142 CVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQK-EGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRV 220 (430)
T ss_dssp EEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSS-CCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGE
T ss_pred cEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCC-CeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCce
Confidence 4577888899999999887 566655543222 23333222 2333566566678999999998543 222
Q ss_pred ------EeccCccccCCceeccccccccCCCeEEE-E-eCCEEEEEECCCC---cEEEEEeccCcceeeeeEEEEecCCE
Q 003791 122 ------SFLRGSKHSKPLLLVPTNLKVDKDSLILV-S-SKGCLHAVSSIDG---EILWTRDFAAESVEVQQVIQLDESDQ 190 (795)
Q Consensus 122 ------~~~~~~~~s~~~~~~~~~~~~~~~~~V~V-~-~~g~l~ald~~tG---~~~W~~~~~~~~~~~~~vv~s~~~~~ 190 (795)
....... ...+.. ... ++.+++ . .+|.|+..|..++ +..+........ +..+.....+..
T Consensus 221 ~~~~~~~~~h~~~----v~~v~~--~p~-~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~--v~~i~~~p~~~~ 291 (430)
T 2xyi_A 221 IDAKNIFTGHTAV----VEDVAW--HLL-HESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAE--VNCLSFNPYSEF 291 (430)
T ss_dssp EECSEEECCCSSC----EEEEEE--CSS-CTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSC--EEEEEECSSCTT
T ss_pred eccceeecCCCCC----EeeeEE--eCC-CCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCC--eEEEEeCCCCCC
Confidence 1111111 111110 111 233444 3 4899999999988 566666543322 222322223444
Q ss_pred EEEEEecCCceeEEEEEEcCC-CceeeeeeeeccCCcccceEEe-cC-cEEEEEECCCCeEEEEEeec
Q 003791 191 IYVVGYAGSSQFHAYQINAMN-GELLNHETAAFSGGFVGDVALV-SS-DTLVTLDTTRSILVTVSFKN 255 (795)
Q Consensus 191 Vyvv~~~g~~~~~v~ald~~t-G~~~w~~~v~~~~~~~~~~~~v-g~-~~lv~~d~~~~~L~v~~l~s 255 (795)
+++.+...+ .+..+|..+ ++++..... ....+.. +.+- .+ .++++.. ..+.+.+-++.+
T Consensus 292 ~l~tg~~dg---~v~vwd~~~~~~~~~~~~~-h~~~v~~-i~~sp~~~~~l~s~~-~d~~i~iwd~~~ 353 (430)
T 2xyi_A 292 ILATGSADK---TVALWDLRNLKLKLHSFES-HKDEIFQ-VQWSPHNETILASSG-TDRRLHVWDLSK 353 (430)
T ss_dssp EEEEEETTS---EEEEEETTCTTSCSEEEEC-CSSCEEE-EEECSSCTTEEEEEE-TTSCCEEEEGGG
T ss_pred EEEEEeCCC---eEEEEeCCCCCCCeEEeec-CCCCEEE-EEECCCCCCEEEEEe-CCCcEEEEeCCC
Confidence 555554433 788889887 444443321 1111211 1121 22 3455544 457888888876
No 162
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=95.80 E-value=1.5 Score=51.31 Aligned_cols=190 Identities=14% Similarity=0.125 Sum_probs=102.6
Q ss_pred CCEEEEEeCCCEEEEEECcCCccceE---EEcC-CcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCcc
Q 003791 53 RKRVVVSTEENVIASLDLRHGEIFWR---HVLG-INDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSK 128 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~ivWR---~~l~-~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~ 128 (795)
.+.+++++.++.|...|..+++..+. +.+. ....+..+.....+..++.++.++.|+.||..+|+...+.......
T Consensus 395 ~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~ 474 (694)
T 3dm0_A 395 ADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKD 474 (694)
T ss_dssp CSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC
T ss_pred CCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCC
Confidence 45688999999999999887765442 2222 2223433322333445554566789999999999998887655443
Q ss_pred ccCCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEeccCc--ceeeeeEEEEecC--CEEEEEEecCCceeE
Q 003791 129 HSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAE--SVEVQQVIQLDES--DQIYVVGYAGSSQFH 203 (795)
Q Consensus 129 ~s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~~--~~~~~~vv~s~~~--~~Vyvv~~~g~~~~~ 203 (795)
. ....+.+ + ++.++.. .++.+...|.. +...+....... ......+..+..+ ..++..+.++ .
T Consensus 475 v-~~~~~s~-----~-~~~l~s~s~D~~i~iwd~~-~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~----~ 542 (694)
T 3dm0_A 475 V-LSVAFSL-----D-NRQIVSASRDRTIKLWNTL-GECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDK----T 542 (694)
T ss_dssp E-EEEEECT-----T-SSCEEEEETTSCEEEECTT-SCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTS----C
T ss_pred E-EEEEEeC-----C-CCEEEEEeCCCEEEEEECC-CCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCC----e
Confidence 2 1111211 2 2334444 37888888754 344444432211 1101112111111 2344434444 5
Q ss_pred EEEEEcCCCceeeeeeeeccCCcccceEEe-cCcEEEEEECCCCeEEEEEeecCe
Q 003791 204 AYQINAMNGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 204 v~ald~~tG~~~w~~~v~~~~~~~~~~~~v-g~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
+...|..+++......-. ...+. .+.+- .+..+++.. ..+.+++-|+.+++
T Consensus 543 v~vwd~~~~~~~~~~~~h-~~~v~-~v~~spdg~~l~sg~-~Dg~i~iwd~~~~~ 594 (694)
T 3dm0_A 543 VKVWNLSNCKLRSTLAGH-TGYVS-TVAVSPDGSLCASGG-KDGVVLLWDLAEGK 594 (694)
T ss_dssp EEEEETTTCCEEEEECCC-SSCEE-EEEECTTSSEEEEEE-TTSBCEEEETTTTE
T ss_pred EEEEECCCCcEEEEEcCC-CCCEE-EEEEeCCCCEEEEEe-CCCeEEEEECCCCc
Confidence 788899888876544211 11111 12221 334565555 45889999998876
No 163
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=95.78 E-value=1 Score=47.10 Aligned_cols=184 Identities=7% Similarity=-0.025 Sum_probs=96.5
Q ss_pred CCEEEEEeCCCEEEEEECcCCccceEEEcCCcc---eeeeeeeeeC-CEEEEEEcc------------------CCeEEE
Q 003791 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGIND---VVDGIDIALG-KYVITLSSD------------------GSTLRA 110 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~---~i~~l~~~~g-~~~V~Vs~~------------------g~~v~A 110 (795)
+++||+++..+.|..+|+++|++..-....... ....+ .... ++.++++.. .+.|+.
T Consensus 91 ~g~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i-~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~ 169 (322)
T 2fp8_A 91 NNQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAV-TVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIK 169 (322)
T ss_dssp TTEEEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEE-EECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEE
T ss_pred CCcEEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceE-EEecCCCEEEEECCcccccccccceehcccCCCceEEE
Confidence 678999988777999999887643211111110 11223 1233 566777542 257999
Q ss_pred EeCCCCcEeEEE-eccCccccCCceeccccccccCC-CeEEEEe--CCEEEEEECCC---CcEEEEEeccCcceeeeeEE
Q 003791 111 WNLPDGQMVWES-FLRGSKHSKPLLLVPTNLKVDKD-SLILVSS--KGCLHAVSSID---GEILWTRDFAAESVEVQQVI 183 (795)
Q Consensus 111 ~d~~tG~llWe~-~~~~~~~s~~~~~~~~~~~~~~~-~~V~V~~--~g~l~ald~~t---G~~~W~~~~~~~~~~~~~vv 183 (795)
+|+.+|+..--. .+..+ ..+ ..+.+ +.++|.. +++|++++..+ |...--...+. |..+.
T Consensus 170 ~d~~~~~~~~~~~~~~~p---~gi-------a~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g----P~gi~ 235 (322)
T 2fp8_A 170 YDPSTKETTLLLKELHVP---GGA-------EVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN----PGNIK 235 (322)
T ss_dssp EETTTTEEEEEEEEESCC---CEE-------EECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS----EEEEE
T ss_pred EeCCCCEEEEeccCCccC---cce-------EECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC----CCCeE
Confidence 999888753221 11111 111 12224 3577763 68999999875 33221112222 33443
Q ss_pred EEecCCEEEEEEecC-------CceeEEEEEEcCCCceeeeeeeeccCC--ccc-ceEEecCcEEEEEECCCCeEEEEEe
Q 003791 184 QLDESDQIYVVGYAG-------SSQFHAYQINAMNGELLNHETAAFSGG--FVG-DVALVSSDTLVTLDTTRSILVTVSF 253 (795)
Q Consensus 184 ~s~~~~~Vyvv~~~g-------~~~~~v~ald~~tG~~~w~~~v~~~~~--~~~-~~~~vg~~~lv~~d~~~~~L~v~~l 253 (795)
...++.+|+..... +....+..+|+ +|+.+.... .+.+ +.. ..+...++.++..+..++.+.++++
T Consensus 236 -~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~--~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~ 311 (322)
T 2fp8_A 236 -RNADGHFWVSSSEELDGNMHGRVDPKGIKFDE-FGNILEVIP--LPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVY 311 (322)
T ss_dssp -ECTTSCEEEEEEEETTSSTTSCEEEEEEEECT-TSCEEEEEE--CCTTTTTSCCCEEEEETTEEEEECSSCSEEEEEEC
T ss_pred -ECCCCCEEEEecCcccccccCCCccEEEEECC-CCCEEEEEE--CCCCCccccceEEEEeCCEEEEeecCCCceEEEec
Confidence 23566788866540 11237889998 588775553 3322 222 1222244555555555566666666
Q ss_pred ec
Q 003791 254 KN 255 (795)
Q Consensus 254 ~s 255 (795)
..
T Consensus 312 ~~ 313 (322)
T 2fp8_A 312 DK 313 (322)
T ss_dssp --
T ss_pred cc
Confidence 54
No 164
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=95.76 E-value=1.7 Score=45.19 Aligned_cols=186 Identities=15% Similarity=0.157 Sum_probs=98.4
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeee------CCEEEEEEccCCeEEEEeCCCCcEeEEEecc
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIAL------GKYVITLSSDGSTLRAWNLPDGQMVWESFLR 125 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~------g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~ 125 (795)
+...++.++.++.|.-.|.+ |+.+-+. ......+..+.... +...++.++.++.++.||..+++..-+....
T Consensus 118 ~~~~l~s~s~D~~i~vwd~~-~~~~~~~-~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h 195 (319)
T 3frx_A 118 KASMIISGSRDKTIKVWTIK-GQCLATL-LGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGH 195 (319)
T ss_dssp TSCEEEEEETTSCEEEEETT-SCEEEEE-CCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred CCCEEEEEeCCCeEEEEECC-CCeEEEE-eccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCC
Confidence 35668889999999888885 3333222 12222222221111 1224444556789999999999887666544
Q ss_pred CccccCCceeccccccccCCCeEEE-E-eCCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeE
Q 003791 126 GSKHSKPLLLVPTNLKVDKDSLILV-S-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFH 203 (795)
Q Consensus 126 ~~~~s~~~~~~~~~~~~~~~~~V~V-~-~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~ 203 (795)
.... ..+.+. .++..++ . .+|.+...|..+++...+.....+ ...+..+ .++..++.+..+ .
T Consensus 196 ~~~v-~~~~~s-------p~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~---v~~~~~s-p~~~~la~~~~~----~ 259 (319)
T 3frx_A 196 NSNI-NTLTAS-------PDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDE---VFSLAFS-PNRYWLAAATAT----G 259 (319)
T ss_dssp CSCE-EEEEEC-------TTSSEEEEEETTCEEEEEETTTTEEEEEEECCSC---EEEEEEC-SSSSEEEEEETT----E
T ss_pred CCcE-EEEEEc-------CCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCc---EEEEEEc-CCCCEEEEEcCC----C
Confidence 3322 111121 1344444 4 389999999999999988865432 2223222 233344434333 3
Q ss_pred EEEEEcCCCceeeeeeeeccC--C-ccc---ceEEe-cCcEEEEEECCCCeEEEEEeecC
Q 003791 204 AYQINAMNGELLNHETAAFSG--G-FVG---DVALV-SSDTLVTLDTTRSILVTVSFKNR 256 (795)
Q Consensus 204 v~ald~~tG~~~w~~~v~~~~--~-~~~---~~~~v-g~~~lv~~d~~~~~L~v~~l~sg 256 (795)
+..++..++..+...+..... . ... .+.+- .+..+++.. ..+.+++-++.++
T Consensus 260 i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~-~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 260 IKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGY-TDNVIRVWQVMTA 318 (319)
T ss_dssp EEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEE-TTSCEEEEEEEEC
T ss_pred cEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEee-cCceEEEEEEeec
Confidence 455566666655544211110 0 011 11121 344665555 3577777777654
No 165
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=95.69 E-value=3 Score=45.11 Aligned_cols=191 Identities=14% Similarity=0.105 Sum_probs=102.8
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEe-EEEeccCcccc
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMV-WESFLRGSKHS 130 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~ll-We~~~~~~~~s 130 (795)
+++.+++++.+|.|.-.|.++|+.+....--.. .+..+ ...+..++.++.++.++.||....... ..........
T Consensus 158 dg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~-~v~~~--s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~- 233 (420)
T 4gga_A 158 EGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSA-RVGSL--SWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEV- 233 (420)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEECCCSS-CEEEE--EEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCE-
T ss_pred CCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCC-ceEEE--eeCCCEEEEEeCCCceeEeeecccceeeEEecccccce-
Confidence 467799999999999999999998877543222 23333 233445554666789999998875543 3333222211
Q ss_pred CCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEE----EeccCcceeeeeEEEEecCCEEEEEEecCCceeEEE
Q 003791 131 KPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWT----RDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAY 205 (795)
Q Consensus 131 ~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~----~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ 205 (795)
......+ + +..++.. .++.+...+..+|+..+. ....... ...+.....+..+++.+. |+....+.
T Consensus 234 ~~~~~~~-----~-g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~--V~~~~~~p~~~~~la~~~-gs~D~~I~ 304 (420)
T 4gga_A 234 CGLRWAP-----D-GRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGA--VKAVAWCPWQSNVLATGG-GTSDRHIR 304 (420)
T ss_dssp EEEEECT-----T-SSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSC--EEEEEECTTCTTEEEEEE-CTTTCEEE
T ss_pred eeeeecC-----C-CCeeeeeeccccceEEeeccccccceeeeeecccCCc--eeeeeeCCCcccEEEEEe-ecCCCEEE
Confidence 1111111 1 2333333 378888888887764321 1111111 111111122333443321 22223677
Q ss_pred EEEcCCCceeeeeeeeccCCcccceEEecCcEEEEEE-CCCCeEEEEEeecCe
Q 003791 206 QINAMNGELLNHETAAFSGGFVGDVALVSSDTLVTLD-TTRSILVTVSFKNRK 257 (795)
Q Consensus 206 ald~~tG~~~w~~~v~~~~~~~~~~~~vg~~~lv~~d-~~~~~L~v~~l~sg~ 257 (795)
..|..+|+.+..... ...+...+.....+.+++.. ...+.+++-++.+++
T Consensus 305 iwd~~t~~~~~~~~~--~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~ 355 (420)
T 4gga_A 305 IWNVCSGACLSAVDA--HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA 355 (420)
T ss_dssp EEETTTTEEEEEEEC--SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC
T ss_pred EEeCCccccceeecc--ccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCc
Confidence 889999998876632 22222211112344555443 345788888888876
No 166
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=95.66 E-value=4.6 Score=47.05 Aligned_cols=108 Identities=9% Similarity=0.010 Sum_probs=60.5
Q ss_pred cCCCEEEEEeC-CC-----EEEEEECcCCccceEEEcCCcc-----------------------eeeeeeee-eCCEEEE
Q 003791 51 TGRKRVVVSTE-EN-----VIASLDLRHGEIFWRHVLGIND-----------------------VVDGIDIA-LGKYVIT 100 (795)
Q Consensus 51 ~~~~~v~vat~-~g-----~l~ALn~~tG~ivWR~~l~~~~-----------------------~i~~l~~~-~g~~~V~ 100 (795)
++++.|++++. ++ .|...|..+|+..-........ .+..+... .|+.+++
T Consensus 46 pdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~ 125 (741)
T 2ecf_A 46 PDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLF 125 (741)
T ss_dssp TTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEE
T ss_pred cCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEE
Confidence 45667888887 77 8999999999864333221110 12222222 3444444
Q ss_pred EEccCCeEEEEeCCCC---cEeEEEeccCccccCCceeccccccccCCCeEEEEeCCEEEEEECCCCcEEE
Q 003791 101 LSSDGSTLRAWNLPDG---QMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSSKGCLHAVSSIDGEILW 168 (795)
Q Consensus 101 Vs~~g~~v~A~d~~tG---~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~~~g~l~ald~~tG~~~W 168 (795)
++. +.|+.||..+| ... +........ ..+.+. .+ ++.++...++.|+.+|..+|+..-
T Consensus 126 -~~~-~~i~~~d~~~~~~~~~~-~l~~~~~~~-~~~~~S-----PD-G~~la~~~~~~i~~~d~~~g~~~~ 186 (741)
T 2ecf_A 126 -PLG-GELYLYDLKQEGKAAVR-QLTHGEGFA-TDAKLS-----PK-GGFVSFIRGRNLWVIDLASGRQMQ 186 (741)
T ss_dssp -EET-TEEEEEESSSCSTTSCC-BCCCSSSCE-EEEEEC-----TT-SSEEEEEETTEEEEEETTTTEEEE
T ss_pred -EeC-CcEEEEECCCCCcceEE-EcccCCccc-ccccCC-----CC-CCEEEEEeCCcEEEEecCCCCEEE
Confidence 443 68999999998 443 111111111 111122 22 234554578899999999987653
No 167
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=95.64 E-value=1 Score=45.99 Aligned_cols=71 Identities=7% Similarity=0.117 Sum_probs=45.4
Q ss_pred CCEEEEEeCCCEEEEEECcCCcc-----ceEE--EcC-CcceeeeeeeeeC--CEEEEEEccCCeEEEEeCCCCcEeEEE
Q 003791 53 RKRVVVSTEENVIASLDLRHGEI-----FWRH--VLG-INDVVDGIDIALG--KYVITLSSDGSTLRAWNLPDGQMVWES 122 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~i-----vWR~--~l~-~~~~i~~l~~~~g--~~~V~Vs~~g~~v~A~d~~tG~llWe~ 122 (795)
+..+++++.+|.|...|.++|+. .|+. .+. ....+..+..... +..++.++.++.|+.||..+++.+-..
T Consensus 71 ~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~ 150 (351)
T 3f3f_A 71 GRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSW 150 (351)
T ss_dssp CSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCC
T ss_pred CCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccc
Confidence 56799999999999999999853 1222 121 1223443322222 445555666779999999999866544
Q ss_pred e
Q 003791 123 F 123 (795)
Q Consensus 123 ~ 123 (795)
.
T Consensus 151 ~ 151 (351)
T 3f3f_A 151 T 151 (351)
T ss_dssp E
T ss_pred c
Confidence 4
No 168
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=95.64 E-value=0.97 Score=48.39 Aligned_cols=71 Identities=10% Similarity=0.066 Sum_probs=45.9
Q ss_pred cCCCEEEEEe--CCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEec
Q 003791 51 TGRKRVVVST--EENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFL 124 (795)
Q Consensus 51 ~~~~~v~vat--~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~ 124 (795)
++++.++++| .++.|.-.|+++|+.+........ +..+...-++..++.++ ++.++.|+..+|..+-+...
T Consensus 143 pDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~--V~~v~fspdg~~l~s~s-~~~~~~~~~~~~~~~~~~~~ 215 (365)
T 4h5i_A 143 REGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGE--VKDLHFSTDGKVVAYIT-GSSLEVISTVTGSCIARKTD 215 (365)
T ss_dssp TTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSC--CCEEEECTTSSEEEEEC-SSCEEEEETTTCCEEEEECC
T ss_pred CCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCc--eEEEEEccCCceEEecc-ceeEEEEEeccCcceeeeec
Confidence 3455566666 579999999999999887654433 44442222333444344 34688888899987765443
No 169
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=95.60 E-value=2.3 Score=44.15 Aligned_cols=146 Identities=11% Similarity=0.088 Sum_probs=80.5
Q ss_pred CCEEEEEe-CCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEcc---CCeEEEEeCCCCcEeEEEeccCcc
Q 003791 53 RKRVVVST-EENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSD---GSTLRAWNLPDGQMVWESFLRGSK 128 (795)
Q Consensus 53 ~~~v~vat-~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~---g~~v~A~d~~tG~llWe~~~~~~~ 128 (795)
+++||+++ ..+.|..+|++++ ..-....+ ....++.+ ..++.++|+.. +..+..+|..+|++..-.......
T Consensus 42 ~g~lyv~d~~~~~I~~~d~~g~-~~~~~~~~--~~p~gia~-~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~ 117 (306)
T 2p4o_A 42 DGTIFVTNHEVGEIVSITPDGN-QQIHATVE--GKVSGLAF-TSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAI 117 (306)
T ss_dssp TSCEEEEETTTTEEEEECTTCC-EEEEEECS--SEEEEEEE-CTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCS
T ss_pred CCCEEEEeCCCCeEEEECCCCc-eEEEEeCC--CCceeEEE-cCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCcc
Confidence 56699988 6789999998654 33222332 22334422 22333565542 236889999999976444432211
Q ss_pred ccCCceeccccccccCCCeEEEEe--CCEEEEEECCCCc-EEEEEec------cCcce-eeeeEEEEecCCEEEEEEecC
Q 003791 129 HSKPLLLVPTNLKVDKDSLILVSS--KGCLHAVSSIDGE-ILWTRDF------AAESV-EVQQVIQLDESDQIYVVGYAG 198 (795)
Q Consensus 129 ~s~~~~~~~~~~~~~~~~~V~V~~--~g~l~ald~~tG~-~~W~~~~------~~~~~-~~~~vv~s~~~~~Vyvv~~~g 198 (795)
. .. .. ....++.+++.. ++.|+++|..+|+ .+|.... ..... .+..+ +..++.+|+.....
T Consensus 118 ~-~~-g~-----~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~ 188 (306)
T 2p4o_A 118 F-LN-GI-----TPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEK 188 (306)
T ss_dssp C-EE-EE-----EESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTT
T ss_pred c-cC-cc-----cccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCC
Confidence 1 00 01 111245566653 7899999998875 3453221 11111 13333 34667899865443
Q ss_pred CceeEEEEEEcCC-Cce
Q 003791 199 SSQFHAYQINAMN-GEL 214 (795)
Q Consensus 199 ~~~~~v~ald~~t-G~~ 214 (795)
+ ++..+|... |+.
T Consensus 189 ~---~I~~~~~~~~g~~ 202 (306)
T 2p4o_A 189 M---LLLRIPVDSTDKP 202 (306)
T ss_dssp T---EEEEEEBCTTSCB
T ss_pred C---EEEEEEeCCCCCC
Confidence 3 678888764 543
No 170
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=95.60 E-value=0.63 Score=50.96 Aligned_cols=192 Identities=12% Similarity=0.011 Sum_probs=99.2
Q ss_pred CCEEEEEeCCCEEEEEECcCCccceEEEcCC-cceeeeeeee-eCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCcccc
Q 003791 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGI-NDVVDGIDIA-LGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHS 130 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~-~~~i~~l~~~-~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s 130 (795)
.+.|.+++.+|.|.-.|..+++..=...+.. .+.+..+... .++..++.++.++.|+.||..++.+...........
T Consensus 132 ~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~- 210 (435)
T 4e54_B 132 PSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINI- 210 (435)
T ss_dssp TTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSC-
T ss_pred CCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCc-
Confidence 4468889999999999998887654444432 2345544322 233445445667899999998876654443332211
Q ss_pred CCceeccccccccCCC-eEEEE-eCCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEE
Q 003791 131 KPLLLVPTNLKVDKDS-LILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQIN 208 (795)
Q Consensus 131 ~~~~~~~~~~~~~~~~-~V~V~-~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald 208 (795)
.+... ....++ .++.. .+|.+...|.. |+..++....... ...+.....+..+++.+...+ .+..+|
T Consensus 211 ---~~~~~--~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~--v~~v~~~p~~~~~~~s~s~d~---~v~iwd 279 (435)
T 4e54_B 211 ---WFCSL--DVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKK--VTHVALNPCCDWFLATASVDQ---TVKIWD 279 (435)
T ss_dssp ---CCCCE--EEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSC--EEEEEECTTCSSEEEEEETTS---BCCEEE
T ss_pred ---cEEEE--EECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccce--EEeeeecCCCceEEEEecCcc---eeeEEe
Confidence 11110 111233 34444 37888888864 5554443322221 122221223334444443322 466678
Q ss_pred cCCCceeeeeeeecc--CCcccceEEecCcEEEEEECCCCeEEEEEeecCe
Q 003791 209 AMNGELLNHETAAFS--GGFVGDVALVSSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 209 ~~tG~~~w~~~v~~~--~~~~~~~~~vg~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
..+++.......... ..+..-+.-..+..++... ..+.+.+-++.++.
T Consensus 280 ~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~-~D~~i~iwd~~~~~ 329 (435)
T 4e54_B 280 LRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTD-QKSEIRVYSASQWD 329 (435)
T ss_dssp TTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEE-SSSCEEEEESSSSS
T ss_pred cccccccceEEEeeeccccccceeECCCCCeeEEEc-CCCEEEEEECCCCc
Confidence 877765433311111 1111101001334555555 45889999998876
No 171
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=95.49 E-value=0.97 Score=55.12 Aligned_cols=195 Identities=11% Similarity=0.135 Sum_probs=110.9
Q ss_pred eeeeeeeccCCCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEE
Q 003791 43 HAVFHTQKTGRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWES 122 (795)
Q Consensus 43 ~~~f~~~~~~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~ 122 (795)
...|+ +++..+.+++.+|.|.-.|..+++..-+ ++....+..+....++.++. ++.++.|+.||..+|+.+-..
T Consensus 22 ~lafs---pdg~~lAsgs~Dg~I~lw~~~~~~~~~~--~~~~~~V~~l~fspg~~L~S-~s~D~~v~lWd~~~~~~~~~~ 95 (902)
T 2oaj_A 22 AAAFD---FTQNLLAIATVTGEVHIYGQQQVEVVIK--LEDRSAIKEMRFVKGIYLVV-INAKDTVYVLSLYSQKVLTTV 95 (902)
T ss_dssp EEEEE---TTTTEEEEEETTSEEEEECSTTCEEEEE--CSSCCCEEEEEEETTTEEEE-EETTCEEEEEETTTCSEEEEE
T ss_pred EEEEC---CCCCEEEEEeCCCEEEEEeCCCcEEEEE--cCCCCCEEEEEEcCCCEEEE-EECcCeEEEEECCCCcEEEEE
Confidence 34555 3466799999999999999988876544 33333354443233543444 445679999999999998887
Q ss_pred eccCccccCCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEec---------cCc-ceeeeeEEEEecCCEE
Q 003791 123 FLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDF---------AAE-SVEVQQVIQLDESDQI 191 (795)
Q Consensus 123 ~~~~~~~s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~---------~~~-~~~~~~vv~s~~~~~V 191 (795)
....... ...+ ..+ .+.+++. .+|.+...|..+|+.. .+.. ... ......+.....++..
T Consensus 96 ~~~~~V~--~v~~-----sp~-g~~l~sgs~dg~V~lwd~~~~~~~-~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~ 166 (902)
T 2oaj_A 96 FVPGKIT--SIDT-----DAS-LDWMLIGLQNGSMIVYDIDRDQLS-SFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGT 166 (902)
T ss_dssp ECSSCEE--EEEC-----CTT-CSEEEEEETTSCEEEEETTTTEEE-EEEECCHHHHHTCSSSCCCCCCEEEEETTEEEE
T ss_pred cCCCCEE--EEEE-----CCC-CCEEEEEcCCCcEEEEECCCCccc-cceeccccccccccccCCCCeEEEEEccCCCCE
Confidence 6443221 1111 112 3445555 4999999999999864 2211 000 0011122111122234
Q ss_pred EEEEecCCceeEEEEEEcCCCceeeeeeeecc----CC---------ccc---ceEEe-cCcEEEEEECCCCeEEEEEee
Q 003791 192 YVVGYAGSSQFHAYQINAMNGELLNHETAAFS----GG---------FVG---DVALV-SSDTLVTLDTTRSILVTVSFK 254 (795)
Q Consensus 192 yvv~~~g~~~~~v~ald~~tG~~~w~~~v~~~----~~---------~~~---~~~~v-g~~~lv~~d~~~~~L~v~~l~ 254 (795)
++++...+ .+ ..|..+|+.+.......+ .+ -.+ .+.+- .+..+++.. ..+.+.+-|+.
T Consensus 167 l~~g~~dg---~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs-~Dg~i~lWd~~ 241 (902)
T 2oaj_A 167 VLISYEYV---TL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIH-EDNSLVFWDAN 241 (902)
T ss_dssp EEEECSSC---EE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEE-TTCCEEEEETT
T ss_pred EEEEeCCC---cE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEE-CCCeEEEEECC
Confidence 44454433 67 889999988765542211 00 001 11121 345666665 45889999998
Q ss_pred cCe
Q 003791 255 NRK 257 (795)
Q Consensus 255 sg~ 257 (795)
+++
T Consensus 242 ~g~ 244 (902)
T 2oaj_A 242 SGH 244 (902)
T ss_dssp TCC
T ss_pred CCc
Confidence 876
No 172
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=95.46 E-value=0.43 Score=56.82 Aligned_cols=192 Identities=15% Similarity=0.107 Sum_probs=99.6
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcCCc-ceeeeeeeeeC--CEEEEEEccCCeEEEEeCCCCc--EeEEEeccC
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIALG--KYVITLSSDGSTLRAWNLPDGQ--MVWESFLRG 126 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~-~~i~~l~~~~g--~~~V~Vs~~g~~v~A~d~~tG~--llWe~~~~~ 126 (795)
+++.+++++.+|.|.-.|..++...-...+... +.+..+..... +..++.++.++.|+.||..+|+ .........
T Consensus 20 dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~ 99 (753)
T 3jro_A 20 YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHS 99 (753)
T ss_dssp SSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCS
T ss_pred CCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCC
Confidence 356799999999999999885543333344322 33444422222 3445545566799999999997 444443332
Q ss_pred ccccCCceeccccccccC-CCeEEEE-eCCEEEEEECCCCcEE--EEEeccCcceeeeeEEEEe-------------cCC
Q 003791 127 SKHSKPLLLVPTNLKVDK-DSLILVS-SKGCLHAVSSIDGEIL--WTRDFAAESVEVQQVIQLD-------------ESD 189 (795)
Q Consensus 127 ~~~s~~~~~~~~~~~~~~-~~~V~V~-~~g~l~ald~~tG~~~--W~~~~~~~~~~~~~vv~s~-------------~~~ 189 (795)
... ....+.+ +. .+.+++. .+|.+...|..++... ......... ...+.... .+.
T Consensus 100 ~~V-~~v~~sp-----~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~--v~~l~~~p~~~~~~~~~~~~~d~~ 171 (753)
T 3jro_A 100 ASV-NSVQWAP-----HEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIG--VNSASWAPATIEEDGEHNGTKESR 171 (753)
T ss_dssp SCE-EEEEECC-----GGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSC--EEEEEECCCC---------CGGGC
T ss_pred CCe-EEEEECC-----CCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCc--eEEEEecCcccccccccccCCCCC
Confidence 222 1111111 11 2334444 4899999998887322 222221111 11121111 233
Q ss_pred EEEEEEecCCceeEEEEEEcCCCceeeeeeeecc---CCcccceEEe-c---CcEEEEEECCCCeEEEEEeecCe
Q 003791 190 QIYVVGYAGSSQFHAYQINAMNGELLNHETAAFS---GGFVGDVALV-S---SDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 190 ~Vyvv~~~g~~~~~v~ald~~tG~~~w~~~v~~~---~~~~~~~~~v-g---~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
.+++.+.+| .+..+|..+|...+....... ..+. .+.+- . +..+++.. ..|.+.+-++.++.
T Consensus 172 ~l~sgs~dg----~I~iwd~~~~~~~~~~~~~~~~h~~~V~-~l~~sp~~~~~~~l~s~s-~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 172 KFVTGGADN----LVKIWKYNSDAQTYVLESTLEGHSDWVR-DVAWSPTVLLRSYLASVS-QDRTCIIWTQDNEQ 240 (753)
T ss_dssp CEEEEETTS----CEEEEEEETTTTEEEEEEEECCCSSCEE-EEEECCCCSSSEEEEEEE-SSSCEEEEEESSSS
T ss_pred EEEEEECCC----eEEEEeccCCcccceeeeeecCCCCcEE-EEEeccCCCCCCEEEEEe-cCCEEEEecCCCCC
Confidence 444444444 577778777765443322111 1111 11221 2 44566665 45889999988864
No 173
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=95.45 E-value=3.1 Score=43.66 Aligned_cols=194 Identities=10% Similarity=0.109 Sum_probs=95.3
Q ss_pred EEEEEeCCC------EEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEcc----CCeEEEEeC--CCCcEeEEE
Q 003791 55 RVVVSTEEN------VIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSD----GSTLRAWNL--PDGQMVWES 122 (795)
Q Consensus 55 ~v~vat~~g------~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~----g~~v~A~d~--~tG~llWe~ 122 (795)
.+|+++-.+ .++.+|+++|++...... .......+....++..+++++. .+.++.|+. .+|++.--.
T Consensus 15 ~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~ 93 (361)
T 3scy_A 15 TMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA-EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLN 93 (361)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEE
T ss_pred EEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc-cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEee
Confidence 477776432 477889999998877766 2222223322233445555443 257877754 447654333
Q ss_pred eccCccccCCceeccccccccCCCeEEEEe--CCEEEEEECCCCcEEE----EEeccC--cc------eeeeeEEEEecC
Q 003791 123 FLRGSKHSKPLLLVPTNLKVDKDSLILVSS--KGCLHAVSSIDGEILW----TRDFAA--ES------VEVQQVIQLDES 188 (795)
Q Consensus 123 ~~~~~~~s~~~~~~~~~~~~~~~~~V~V~~--~g~l~ald~~tG~~~W----~~~~~~--~~------~~~~~vv~s~~~ 188 (795)
...... ..+..+ ..+ ++.+++.. ++.+..++..++..+. ...... +. ..+..+..+..+
T Consensus 94 ~~~~~~--~~p~~~----~~d-g~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg 166 (361)
T 3scy_A 94 TQKTMG--ADPCYL----TTN-GKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDG 166 (361)
T ss_dssp EEECSS--SCEEEE----EEC-SSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTS
T ss_pred EeccCC--CCcEEE----EEC-CCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCC
Confidence 322111 111122 222 45566653 7788888876432211 111110 00 001223323344
Q ss_pred CEEEEEEecCCceeEEEEEEcCCC----c-eeee---eeeeccCCcc-cceEEe-cCcEEEEEECCCCeEEEEEeecCe
Q 003791 189 DQIYVVGYAGSSQFHAYQINAMNG----E-LLNH---ETAAFSGGFV-GDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 189 ~~Vyvv~~~g~~~~~v~ald~~tG----~-~~w~---~~v~~~~~~~-~~~~~v-g~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
..+|+.+. +...+.++.++..+| + .... .....+.+.. ..+.+- .+..+++.+...+.+.+.++.+++
T Consensus 167 ~~l~~~~~-~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~ 244 (361)
T 3scy_A 167 KYLLADDL-GTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGM 244 (361)
T ss_dssp SEEEEEET-TTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTE
T ss_pred CEEEEEeC-CCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCc
Confidence 45776543 334566666676666 4 3221 1112221111 122222 344666777667889999999876
No 174
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=95.34 E-value=3.6 Score=44.99 Aligned_cols=149 Identities=12% Similarity=0.075 Sum_probs=81.1
Q ss_pred CCEEEEEeCC-CEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEcc-CC-eEEEEeCCCCcEeEEE-eccCcc
Q 003791 53 RKRVVVSTEE-NVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSD-GS-TLRAWNLPDGQMVWES-FLRGSK 128 (795)
Q Consensus 53 ~~~v~vat~~-g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~-g~-~v~A~d~~tG~llWe~-~~~~~~ 128 (795)
++.||++... +.|..+|+++|.+.--...... .. +.....++.++++.. ++ .++.||..++...-.. ......
T Consensus 141 ~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~--~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~ 217 (409)
T 3hrp_A 141 NNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKG--GK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTF 217 (409)
T ss_dssp TTEEEEEETTTTEEEEEETTTTEEEEEEETCCB--CB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTS
T ss_pred CCCEEEEecCCCcEEEEECCCCEEEEeeccCCC--Cc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchh
Confidence 6678888764 7899999988877533222111 11 212234446666654 33 8999999887653222 111101
Q ss_pred ccCCceeccccccccC-CCeEEEE-eCCEEEEEECCCCcEEEEEecc---Ccceeee-eEEEEecCCEEEEEEecCCcee
Q 003791 129 HSKPLLLVPTNLKVDK-DSLILVS-SKGCLHAVSSIDGEILWTRDFA---AESVEVQ-QVIQLDESDQIYVVGYAGSSQF 202 (795)
Q Consensus 129 ~s~~~~~~~~~~~~~~-~~~V~V~-~~g~l~ald~~tG~~~W~~~~~---~~~~~~~-~vv~s~~~~~Vyvv~~~g~~~~ 202 (795)
. ..+.-+ ..+. ++.+++. .++.++++|..+|......... .....|. .+.....++.+|+.....+
T Consensus 218 ~-~~p~~i----av~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~--- 289 (409)
T 3hrp_A 218 S-GKIGAV----ALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLS--- 289 (409)
T ss_dssp C-SCCCBC----EECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTT---
T ss_pred c-CCcEEE----EEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCC---
Confidence 1 001111 2333 5677775 3789999999988754432111 1111233 4432233688887654433
Q ss_pred EEEEEEcCCCc
Q 003791 203 HAYQINAMNGE 213 (795)
Q Consensus 203 ~v~ald~~tG~ 213 (795)
++..+|.. |+
T Consensus 290 ~I~~~~~~-g~ 299 (409)
T 3hrp_A 290 SVYKITPD-GE 299 (409)
T ss_dssp EEEEECTT-CC
T ss_pred EEEEEecC-CC
Confidence 67778764 44
No 175
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=95.28 E-value=3 Score=42.51 Aligned_cols=187 Identities=10% Similarity=0.085 Sum_probs=96.4
Q ss_pred CEEEEEeCCCEEEEEECcCCccceE-EEcCCc---ceeeeeeeeeCCEEEEEEcc-C---------------CeEEEEeC
Q 003791 54 KRVVVSTEENVIASLDLRHGEIFWR-HVLGIN---DVVDGIDIALGKYVITLSSD-G---------------STLRAWNL 113 (795)
Q Consensus 54 ~~v~vat~~g~l~ALn~~tG~ivWR-~~l~~~---~~i~~l~~~~g~~~V~Vs~~-g---------------~~v~A~d~ 113 (795)
+++|+++..+.|..+|++ |+...- ...... ..+..+. ...++.++++.. + +.|+.+|.
T Consensus 83 g~l~v~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~-~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 160 (314)
T 1pjx_A 83 NQLFVADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCA-FDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTT 160 (314)
T ss_dssp SEEEEEETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEE-ECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECT
T ss_pred CcEEEEECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEE-ECCCCCEEEEecCcccccccccccccCCCCeEEEECC
Confidence 789999987789999998 886422 111111 0122331 223444555543 2 47999998
Q ss_pred CCCcEeEEEeccCccccCCceeccccccccCCC-eEEEEe--CCEEEEEECC-CCcE----EEEEeccCcc-eeeeeEEE
Q 003791 114 PDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDS-LILVSS--KGCLHAVSSI-DGEI----LWTRDFAAES-VEVQQVIQ 184 (795)
Q Consensus 114 ~tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~-~V~V~~--~g~l~ald~~-tG~~----~W~~~~~~~~-~~~~~vv~ 184 (795)
. |+........... ..+.+.. ..+.++ .+++.. ++.|+.+|.. +|+. .+. ..+... ..+..+.
T Consensus 161 ~-g~~~~~~~~~~~~--~~i~~~~---~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~~~~p~~i~- 232 (314)
T 1pjx_A 161 D-GQMIQVDTAFQFP--NGIAVRH---MNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWG-HIPGTHEGGADGMD- 232 (314)
T ss_dssp T-SCEEEEEEEESSE--EEEEEEE---CTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEE-ECCCCSSCEEEEEE-
T ss_pred C-CCEEEeccCCCCc--ceEEEec---ccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEE-ECCCCCCCCCCceE-
Confidence 6 8765432211111 1111110 001244 566653 6889999876 6753 222 122111 1133332
Q ss_pred EecCCEEEEEEecCCceeEEEEEEcCCCceeeeeeeeccCCcccceEEe-cCcEEEEEECCCCeEEEEEeec
Q 003791 185 LDESDQIYVVGYAGSSQFHAYQINAMNGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKN 255 (795)
Q Consensus 185 s~~~~~Vyvv~~~g~~~~~v~ald~~tG~~~w~~~v~~~~~~~~~~~~v-g~~~lv~~d~~~~~L~v~~l~s 255 (795)
...++.+|+....++ .+..+|+.+|+.+.... .+......+.+- .++.+++.+...+.+..+++..
T Consensus 233 ~d~~G~l~v~~~~~~---~i~~~d~~~g~~~~~~~--~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 233 FDEDNNLLVANWGSS---HIEVFGPDGGQPKMRIR--CPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EBTTCCEEEEEETTT---EEEEECTTCBSCSEEEE--CSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred ECCCCCEEEEEcCCC---EEEEEcCCCCcEeEEEe--CCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 235678888665433 68999999898775543 221111122221 2233545554556677776654
No 176
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=95.19 E-value=2.2 Score=44.82 Aligned_cols=104 Identities=17% Similarity=0.197 Sum_probs=60.3
Q ss_pred CCCEEEEEeCCCEEEEEECcCCcc-----ceEEEcCC-cceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEecc
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEI-----FWRHVLGI-NDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLR 125 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~i-----vWR~~l~~-~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~ 125 (795)
+++.++.++.++.|.-.|..+++. .-...+.. ...+..+.....+..++.++.++.|+.||..+|+.+-+....
T Consensus 38 d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h 117 (343)
T 2xzm_R 38 DSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGH 117 (343)
T ss_dssp CCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECC
T ss_pred CCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCC
Confidence 456788999999998888776542 11122221 122333322223334444556789999999999998877655
Q ss_pred CccccCCceeccccccccCCCeEEEE-eCCEEEEEECC
Q 003791 126 GSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSI 162 (795)
Q Consensus 126 ~~~~s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~ 162 (795)
.... ....+.+ + +..++.. .++.+...|..
T Consensus 118 ~~~v-~~v~~sp-----~-~~~l~s~~~d~~i~~wd~~ 148 (343)
T 2xzm_R 118 QSEV-YSVAFSP-----D-NRQILSAGAEREIKLWNIL 148 (343)
T ss_dssp CSCE-EEEEECS-----S-TTEEEEEETTSCEEEEESS
T ss_pred CCcE-EEEEECC-----C-CCEEEEEcCCCEEEEEecc
Confidence 4332 1111211 2 2344444 38888888876
No 177
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=95.17 E-value=1.4 Score=45.87 Aligned_cols=185 Identities=14% Similarity=0.092 Sum_probs=98.4
Q ss_pred EEEEEeCCCEEEEEECcCCccceEEEcCCcc--eeeeee-eeeCCEEEEEEcc-----C------CeEEEEeCCCCcEeE
Q 003791 55 RVVVSTEENVIASLDLRHGEIFWRHVLGIND--VVDGID-IALGKYVITLSSD-----G------STLRAWNLPDGQMVW 120 (795)
Q Consensus 55 ~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~--~i~~l~-~~~g~~~V~Vs~~-----g------~~v~A~d~~tG~llW 120 (795)
.+|+... +.+.++|+.+++ |+. .+.+. .-.+.. +..++.+++++|. + ..+..+|+.+++ |
T Consensus 6 ~l~~~GG-~~~~~yd~~~~~--W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~--W 79 (315)
T 4asc_A 6 LIFMISE-EGAVAYDPAANE--CYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSE--W 79 (315)
T ss_dssp EEEEEET-TEEEEEETTTTE--EEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTE--E
T ss_pred EEEEEcC-CceEEECCCCCe--Eec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCe--E
Confidence 3554444 689999999987 986 22211 111111 2345556666662 1 128889998875 8
Q ss_pred EEeccCccccCCceeccccccccCCCeEEEEeC----------CEEEEEECCCCcEEEEEeccCccee-eeeEEEEecCC
Q 003791 121 ESFLRGSKHSKPLLLVPTNLKVDKDSLILVSSK----------GCLHAVSSIDGEILWTRDFAAESVE-VQQVIQLDESD 189 (795)
Q Consensus 121 e~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~~~----------g~l~ald~~tG~~~W~~~~~~~~~~-~~~vv~s~~~~ 189 (795)
+....-+.. ......... ++.+++.++ ..+..+|..++ .|+.-.+.+.-. ...+ ...++
T Consensus 80 ~~~~~~p~~-----r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~--~W~~~~~~p~~r~~~~~--~~~~~ 149 (315)
T 4asc_A 80 LGMPPLPSP-----RCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSF--KWGESDPLPYVVYGHTV--LSHMD 149 (315)
T ss_dssp EECCCBSSC-----EESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTT--EEEECCCCSSCCBSCEE--EEETT
T ss_pred EECCCCCcc-----hhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCC--cEeECCCCCCcccceeE--EEECC
Confidence 654222111 111000112 566777532 35899999887 488644332210 1112 24678
Q ss_pred EEEEEEecC---CceeEEEEEEcCCCceeeeeeeeccCCccc-ceEEecCcEEEEEECCC----CeEEEEEeecCe
Q 003791 190 QIYVVGYAG---SSQFHAYQINAMNGELLNHETAAFSGGFVG-DVALVSSDTLVTLDTTR----SILVTVSFKNRK 257 (795)
Q Consensus 190 ~Vyvv~~~g---~~~~~v~ald~~tG~~~w~~~v~~~~~~~~-~~~~vg~~~lv~~d~~~----~~L~v~~l~sg~ 257 (795)
.+|++|-.. ...-.+..+|+.+. .|+..-..|..... .+...++.+++..-... ..+.+.|+.+++
T Consensus 150 ~iyv~GG~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 150 LVYVIGGKGSDRKCLNKMCVYDPKKF--EWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp EEEEECCBCTTSCBCCCEEEEETTTT--EEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred EEEEEeCCCCCCcccceEEEEeCCCC--eEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCe
Confidence 899887541 11235888998876 57764444544433 33334555555432211 246677777665
No 178
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.14 E-value=3.4 Score=42.39 Aligned_cols=191 Identities=14% Similarity=0.091 Sum_probs=103.0
Q ss_pred CCEEEEEeC------CCEEEEEECcCCc-cceEEEcCCcceeee-eeeeeCCEEEEEEccC-----CeEEEEeCCCCcEe
Q 003791 53 RKRVVVSTE------ENVIASLDLRHGE-IFWRHVLGINDVVDG-IDIALGKYVITLSSDG-----STLRAWNLPDGQMV 119 (795)
Q Consensus 53 ~~~v~vat~------~g~l~ALn~~tG~-ivWR~~l~~~~~i~~-l~~~~g~~~V~Vs~~g-----~~v~A~d~~tG~ll 119 (795)
+++||+... .+.+..+|+.+++ ..|+..-+.+..-.. .....++.+++++|.+ ..+..+|+.+++
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~-- 139 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQ-- 139 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTE--
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCe--
Confidence 677887654 2579999999986 559987544321111 1123466566656532 368999998775
Q ss_pred EEEeccCccccCCceeccccccccCCCeEEEEe-------CCEEEEEECCCCcEEEEEeccCcce-eeeeEEEEecCCEE
Q 003791 120 WESFLRGSKHSKPLLLVPTNLKVDKDSLILVSS-------KGCLHAVSSIDGEILWTRDFAAESV-EVQQVIQLDESDQI 191 (795)
Q Consensus 120 We~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~~-------~g~l~ald~~tG~~~W~~~~~~~~~-~~~~vv~s~~~~~V 191 (795)
|+....-+........ ... ++.+++.+ ...+..+|..++ .|+.-.+.+.- ....+ ...++.+
T Consensus 140 W~~~~~~p~~r~~~~~-----~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~--~W~~~~~~p~~r~~~~~--~~~~~~i 209 (301)
T 2vpj_A 140 WSMLGDMQTAREGAGL-----VVA-SGVIYCLGGYDGLNILNSVEKYDPHTG--HWTNVTPMATKRSGAGV--ALLNDHI 209 (301)
T ss_dssp EEEEEECSSCCBSCEE-----EEE-TTEEEEECCBCSSCBCCCEEEEETTTT--EEEEECCCSSCCBSCEE--EEETTEE
T ss_pred EEECCCCCCCcccceE-----EEE-CCEEEEECCCCCCcccceEEEEeCCCC--cEEeCCCCCcccccceE--EEECCEE
Confidence 7764322211011111 112 56677753 256889998876 68765332211 01112 2357889
Q ss_pred EEEEecCCc--eeEEEEEEcCCCceeeeeeeeccCCccc-ceEEecCcEEEEEECCC----CeEEEEEeecCe
Q 003791 192 YVVGYAGSS--QFHAYQINAMNGELLNHETAAFSGGFVG-DVALVSSDTLVTLDTTR----SILVTVSFKNRK 257 (795)
Q Consensus 192 yvv~~~g~~--~~~v~ald~~tG~~~w~~~v~~~~~~~~-~~~~vg~~~lv~~d~~~----~~L~v~~l~sg~ 257 (795)
|++|-..+. .-.+..+|+.+++ |+..-..|..... .+.+.++.+++..-.+. ..+.+.|+++++
T Consensus 210 ~v~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 210 YVVGGFDGTAHLSSVEAYNIRTDS--WTTVTSMTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp EEECCBCSSSBCCCEEEEETTTTE--EEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred EEEeCCCCCcccceEEEEeCCCCc--EEECCCCCCcccceeEEEECCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 988743211 2358889998874 6654334433333 23333444443321111 245666666655
No 179
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=95.14 E-value=1.2 Score=46.91 Aligned_cols=108 Identities=11% Similarity=0.072 Sum_probs=61.5
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcCCc--ceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccc
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGIN--DVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKH 129 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~--~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~ 129 (795)
+++.+.+++.++.|.-.|..+|+..-+..+... ..+..+.....+..++.++.++.++.||..++.......+.+-.
T Consensus 27 ~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~- 105 (345)
T 3fm0_A 27 AGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHE- 105 (345)
T ss_dssp TSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCS-
T ss_pred CCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCC-
Confidence 466788999999999999988876555554322 33444432233445554666779999999888654333332211
Q ss_pred cCCceeccccccccCCCeEEE-Ee-CCEEEEEECCCCc
Q 003791 130 SKPLLLVPTNLKVDKDSLILV-SS-KGCLHAVSSIDGE 165 (795)
Q Consensus 130 s~~~~~~~~~~~~~~~~~V~V-~~-~g~l~ald~~tG~ 165 (795)
.....+ ....++..++ .+ ++.+...|..++.
T Consensus 106 -~~v~~v----~~sp~~~~l~s~s~D~~v~iwd~~~~~ 138 (345)
T 3fm0_A 106 -NEVKSV----AWAPSGNLLATCSRDKSVWVWEVDEED 138 (345)
T ss_dssp -SCEEEE----EECTTSSEEEEEETTSCEEEEEECTTS
T ss_pred -CCceEE----EEeCCCCEEEEEECCCeEEEEECCCCC
Confidence 011111 1111333343 33 7778777776664
No 180
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=95.08 E-value=2.8 Score=43.43 Aligned_cols=150 Identities=10% Similarity=-0.027 Sum_probs=77.8
Q ss_pred CCEEEE-EeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEc-cC----CeEEEEeCCCCcEeEEEeccC
Q 003791 53 RKRVVV-STEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSS-DG----STLRAWNLPDGQMVWESFLRG 126 (795)
Q Consensus 53 ~~~v~v-at~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~-~g----~~v~A~d~~tG~llWe~~~~~ 126 (795)
++++|+ .+.++.|..+|+++|+..-... .....+.++.. ..++.++++. .+ +.|+.||..+|+..-......
T Consensus 55 ~g~l~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~~~i~~-~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 132 (333)
T 2dg1_A 55 QGQLFLLDVFEGNIFKINPETKEIKRPFV-SHKANPAAIKI-HKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLS 132 (333)
T ss_dssp TSCEEEEETTTCEEEEECTTTCCEEEEEE-CSSSSEEEEEE-CTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSS
T ss_pred CCCEEEEECCCCEEEEEeCCCCcEEEEee-CCCCCcceEEE-CCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCc
Confidence 556776 5678899999999998543221 22222444422 2233344443 33 489999999887641111111
Q ss_pred ccccCCceeccccccccCCCeEEEEe--------CCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecC
Q 003791 127 SKHSKPLLLVPTNLKVDKDSLILVSS--------KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAG 198 (795)
Q Consensus 127 ~~~s~~~~~~~~~~~~~~~~~V~V~~--------~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g 198 (795)
.. ..+.- ...+.++.+++.. .+.|+.+|..+|+..-...... .+..+..+..+..+|+.....
T Consensus 133 ~~--~~~~~----i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~i~~~~dg~~l~v~~~~~ 203 (333)
T 2dg1_A 133 TA--YCIDD----MVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNIS---VANGIALSTDEKVLWVTETTA 203 (333)
T ss_dssp SC--CCEEE----EEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEES---SEEEEEECTTSSEEEEEEGGG
T ss_pred cC--Ccccc----eEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCC---cccceEECCCCCEEEEEeCCC
Confidence 10 01111 1233356677753 2689999988776543221100 122232122334577755332
Q ss_pred CceeEEEEEEcCC-Cceee
Q 003791 199 SSQFHAYQINAMN-GELLN 216 (795)
Q Consensus 199 ~~~~~v~ald~~t-G~~~w 216 (795)
+ .+..+|..+ |..+.
T Consensus 204 ~---~i~~~d~~~~g~~~~ 219 (333)
T 2dg1_A 204 N---RLHRIALEDDGVTIQ 219 (333)
T ss_dssp T---EEEEEEECTTSSSEE
T ss_pred C---eEEEEEecCCCcCcc
Confidence 2 677788763 55443
No 181
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=95.02 E-value=0.66 Score=49.24 Aligned_cols=152 Identities=13% Similarity=-0.011 Sum_probs=78.3
Q ss_pred cCCCEEEEEeC-CC--EEEEEECcCCccceEEEcCCcc-eeeeeeee-eCCEEEEEEccCCeEEEEeCCCCcEeEEEecc
Q 003791 51 TGRKRVVVSTE-EN--VIASLDLRHGEIFWRHVLGIND-VVDGIDIA-LGKYVITLSSDGSTLRAWNLPDGQMVWESFLR 125 (795)
Q Consensus 51 ~~~~~v~vat~-~g--~l~ALn~~tG~ivWR~~l~~~~-~i~~l~~~-~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~ 125 (795)
++++.|+++++ +| .|+.+|+++|+.. +.+.... ........ .++.+++.+ .+..++.||..+|+..--....
T Consensus 45 pDg~~l~~~~~~~g~~~l~~~d~~~g~~~--~lt~~~~~~~~~~~~spdg~~l~~~~-~~~~l~~~d~~~g~~~~~~~~~ 121 (388)
T 3pe7_A 45 RDGSKLLFGGAFDGPWNYYLLDLNTQVAT--QLTEGRGDNTFGGFLSPDDDALFYVK-DGRNLMRVDLATLEENVVYQVP 121 (388)
T ss_dssp TTSCEEEEEECTTSSCEEEEEETTTCEEE--ECCCSSCBCSSSCEECTTSSEEEEEE-TTTEEEEEETTTCCEEEEEECC
T ss_pred CCCCEEEEEEcCCCCceEEEEeCCCCceE--EeeeCCCCCccceEEcCCCCEEEEEe-CCCeEEEEECCCCcceeeeech
Confidence 44666777766 55 5999999999864 3333221 11111122 344555544 4568999999999876554443
Q ss_pred CccccCCceeccccccccCCCeEEEE------------------------eCCEEEEEECCCCcEEEEEeccCcceeeee
Q 003791 126 GSKHSKPLLLVPTNLKVDKDSLILVS------------------------SKGCLHAVSSIDGEILWTRDFAAESVEVQQ 181 (795)
Q Consensus 126 ~~~~s~~~~~~~~~~~~~~~~~V~V~------------------------~~g~l~ald~~tG~~~W~~~~~~~~~~~~~ 181 (795)
.... ...... ...++..++. .+..|+.+|..+|+..--...... ...
T Consensus 122 ~~~~-~~~~~~-----~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~---~~~ 192 (388)
T 3pe7_A 122 AEWV-GYGTWV-----ANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQW---LGH 192 (388)
T ss_dssp TTEE-EEEEEE-----ECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSC---EEE
T ss_pred hhcc-ccccee-----ECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCcc---ccc
Confidence 3211 000010 0112323321 136899999999987654433221 112
Q ss_pred EEEEe-cCCEEEEEEecCC--ceeEEEEEEcCCCce
Q 003791 182 VIQLD-ESDQIYVVGYAGS--SQFHAYQINAMNGEL 214 (795)
Q Consensus 182 vv~s~-~~~~Vyvv~~~g~--~~~~v~ald~~tG~~ 214 (795)
+..+. .+..+.+....+. ....+..+|+.+++.
T Consensus 193 ~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~ 228 (388)
T 3pe7_A 193 PIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM 228 (388)
T ss_dssp EEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC
T ss_pred cEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce
Confidence 22233 3334443333221 123677888876654
No 182
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.00 E-value=2.7 Score=43.63 Aligned_cols=196 Identities=11% Similarity=0.068 Sum_probs=103.0
Q ss_pred eeeeccCCCEEEEEeC-----CCEEEEEECcCCccceEEEcCCcceeee-eeeeeCCEEEEEEcc----C-----CeEEE
Q 003791 46 FHTQKTGRKRVVVSTE-----ENVIASLDLRHGEIFWRHVLGINDVVDG-IDIALGKYVITLSSD----G-----STLRA 110 (795)
Q Consensus 46 f~~~~~~~~~v~vat~-----~g~l~ALn~~tG~ivWR~~l~~~~~i~~-l~~~~g~~~V~Vs~~----g-----~~v~A 110 (795)
.+++...+++||+... .+.+.++|+.+++ |+..-+.+..-.+ ..+..++.+++++|. . ..+..
T Consensus 17 ~~~~~~~~~~i~v~GG~~~~~~~~~~~~d~~~~~--W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~ 94 (308)
T 1zgk_A 17 GSHAPKVGRLIYTAGGYFRQSLSYLEAYNPSNGT--WLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDC 94 (308)
T ss_dssp ----CCCCCCEEEECCBSSSBCCCEEEEETTTTE--EEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEE
T ss_pred CccccCCCCEEEEEeCcCCCCcceEEEEcCCCCe--EeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEE
Confidence 4444444667777654 3579999999885 9976433211111 112346666666654 1 35889
Q ss_pred EeCCCCcEeEEEeccCccccCCceeccccccccCCCeEEEEe-------CCEEEEEECCCCcEEEEEeccCccee-eeeE
Q 003791 111 WNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSS-------KGCLHAVSSIDGEILWTRDFAAESVE-VQQV 182 (795)
Q Consensus 111 ~d~~tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~~-------~g~l~ald~~tG~~~W~~~~~~~~~~-~~~v 182 (795)
+|+.+++ |+....-+.......+ ... ++.+++.+ -..+..+|..++ .|+.-.+.+.-. ...+
T Consensus 95 ~d~~~~~--W~~~~~~p~~r~~~~~-----~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~ 164 (308)
T 1zgk_A 95 YNPMTNQ--WSPCAPMSVPRNRIGV-----GVI-DGHIYAVGGSHGCIHHNSVERYEPERD--EWHLVAPMLTRRIGVGV 164 (308)
T ss_dssp EETTTTE--EEECCCCSSCCBTCEE-----EEE-TTEEEEECCEETTEECCCEEEEETTTT--EEEECCCCSSCCBSCEE
T ss_pred ECCCCCe--EeECCCCCcCccccEE-----EEE-CCEEEEEcCCCCCcccccEEEECCCCC--eEeECCCCCccccceEE
Confidence 9998874 8765322211011111 112 56677753 246888888876 577644322210 1112
Q ss_pred EEEecCCEEEEEEecCCc--eeEEEEEEcCCCceeeeeeeeccCCccc-ceEEecCcEEEEEECC----CCeEEEEEeec
Q 003791 183 IQLDESDQIYVVGYAGSS--QFHAYQINAMNGELLNHETAAFSGGFVG-DVALVSSDTLVTLDTT----RSILVTVSFKN 255 (795)
Q Consensus 183 v~s~~~~~Vyvv~~~g~~--~~~v~ald~~tG~~~w~~~v~~~~~~~~-~~~~vg~~~lv~~d~~----~~~L~v~~l~s 255 (795)
..-++.+|++|-..+. .-.+..+|+.+. .|+..-..|..... .+++.++.+++..-.. ...+.+.|+.+
T Consensus 165 --~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~ 240 (308)
T 1zgk_A 165 --AVLNRLLYAVGGFDGTNRLNSAECYYPERN--EWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVET 240 (308)
T ss_dssp --EEETTEEEEECCBCSSCBCCCEEEEETTTT--EEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTT
T ss_pred --EEECCEEEEEeCCCCCCcCceEEEEeCCCC--eEeeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCC
Confidence 2347899988643211 235788998876 46654334433333 2333344444432111 24577888877
Q ss_pred Ce
Q 003791 256 RK 257 (795)
Q Consensus 256 g~ 257 (795)
++
T Consensus 241 ~~ 242 (308)
T 1zgk_A 241 ET 242 (308)
T ss_dssp TE
T ss_pred Cc
Confidence 66
No 183
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=94.94 E-value=4 Score=44.25 Aligned_cols=179 Identities=7% Similarity=-0.116 Sum_probs=104.9
Q ss_pred CCEEEEEeCC-C----EEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEc----------cCCeEEEEeCCCCc
Q 003791 53 RKRVVVSTEE-N----VIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSS----------DGSTLRAWNLPDGQ 117 (795)
Q Consensus 53 ~~~v~vat~~-g----~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~----------~g~~v~A~d~~tG~ 117 (795)
..++||..+. + .|..||++|++++=+...+... ++.+.-++..+||+. .++.|..||+.+++
T Consensus 31 ~~~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P---~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~ 107 (368)
T 1mda_H 31 SRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS---LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL 107 (368)
T ss_dssp TTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC---EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC
T ss_pred CCeEEEECCccCCccceEEEEECCCCeEEEEEeCCCCC---ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCC
Confidence 5689998874 4 8899999999999887776542 342334556777764 24689999999999
Q ss_pred EeEEEeccCcc------ccCCceeccccccccCCCeEEEEe---CCEEEE--EECCCCcEEEEEeccCcceeeeeEEEEe
Q 003791 118 MVWESFLRGSK------HSKPLLLVPTNLKVDKDSLILVSS---KGCLHA--VSSIDGEILWTRDFAAESVEVQQVIQLD 186 (795)
Q Consensus 118 llWe~~~~~~~------~s~~~~~~~~~~~~~~~~~V~V~~---~g~l~a--ld~~tG~~~W~~~~~~~~~~~~~vv~s~ 186 (795)
++.+..+.++. ....+.+ ..+ ++.+||.. +..+.. +|..+ +-+...+... .+. .
T Consensus 108 vv~~I~v~~~~~~~~g~~P~~ia~-----SpD-Gk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~----~~~--p 172 (368)
T 1mda_H 108 PIADIELPDAPRFSVGPRVHIIGN-----CAS-SACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCF----HIH--P 172 (368)
T ss_dssp EEEEEEETTSCSCCBSCCTTSEEE-----CTT-SSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCC----CCE--E
T ss_pred EEEEEECCCccccccCCCcceEEE-----cCC-CCEEEEEccCCCCeEEEEEEchhh---ceEEECCCce----EEc--c
Confidence 99999875210 0011111 223 45677763 456777 88877 3344433211 111 2
Q ss_pred cCCEEEEE-EecCCceeEEEEEEcCC-----CceeeeeeeeccCCcccce-EEecCcEEEEEECCCCeEEEEEeecCe
Q 003791 187 ESDQIYVV-GYAGSSQFHAYQINAMN-----GELLNHETAAFSGGFVGDV-ALVSSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 187 ~~~~Vyvv-~~~g~~~~~v~ald~~t-----G~~~w~~~v~~~~~~~~~~-~~vg~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
.+...|+. +.+| ++..+|..+ |+..+..+ ....+...+ ....++.+++++. +.++++|+.++.
T Consensus 173 ~g~~~~~~~~~dg----~~~~vd~~~~~~~~~~v~~~~t--~~i~vg~~P~~~~~~~~~~~vs~--~~V~viD~~~~~ 242 (368)
T 1mda_H 173 GAAATHYLGSCPA----SLAASDLAAAPAAAGIVGAQCT--GAQNCSSQAAQANYPGMLVWAVA--SSILQGDIPAAG 242 (368)
T ss_dssp EETTEEECCCCTT----SCEEEECCSSCCCCEECCCCSC--TTSCBCSCCEEETTTTEEEECBS--SCCEEEECCSSC
T ss_pred CCCeEEEEEcCCC----CEEEEECccccccCCeEEEEee--eeeeCCCCccccccCCEEEEEcC--CEEEEEECCCCc
Confidence 34445542 2223 456688887 77766432 001111111 1223345555554 789999987643
No 184
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=94.93 E-value=2.6 Score=45.91 Aligned_cols=188 Identities=13% Similarity=0.102 Sum_probs=93.9
Q ss_pred CCEEEEEeCC------CEEEEEECcCCccceEEEcCCcceeeeeeee-eCCEEEEEEccC--CeEEEEeCCCCcEeEEEe
Q 003791 53 RKRVVVSTEE------NVIASLDLRHGEIFWRHVLGINDVVDGIDIA-LGKYVITLSSDG--STLRAWNLPDGQMVWESF 123 (795)
Q Consensus 53 ~~~v~vat~~------g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~-~g~~~V~Vs~~g--~~v~A~d~~tG~llWe~~ 123 (795)
+++++.++++ +.|...|...+.+ +........+...... .++.+++++.++ ..|+.||..+|+..--..
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~--~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~ 220 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQ--FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVAS 220 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCSC--EEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEEC
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCCC--EEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeec
Confidence 4555555443 6899999875543 2222222223332222 455566665442 589999999998763222
Q ss_pred ccCccccCCceeccccccccCCCeEEE-Ee---CCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCC
Q 003791 124 LRGSKHSKPLLLVPTNLKVDKDSLILV-SS---KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGS 199 (795)
Q Consensus 124 ~~~~~~s~~~~~~~~~~~~~~~~~V~V-~~---~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~ 199 (795)
..... ..+.+.| + ++.+++ .+ +..|+.+|..+|+..--.... .. ...+..+.++..+++.+..+
T Consensus 221 ~~~~~--~~~~~sp-----d-g~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~-~~--~~~~~~spdg~~l~~~s~~~- 288 (415)
T 2hqs_A 221 FPRHN--GAPAFSP-----D-GSKLAFALSKTGSLNLYVMDLASGQIRQVTDGR-SN--NTEPTWFPDSQNLAFTSDQA- 288 (415)
T ss_dssp CSSCE--EEEEECT-----T-SSEEEEEECTTSSCEEEEEETTTCCEEECCCCS-SC--EEEEEECTTSSEEEEEECTT-
T ss_pred CCCcc--cCEEEcC-----C-CCEEEEEEecCCCceEEEEECCCCCEEeCcCCC-Cc--ccceEECCCCCEEEEEECCC-
Confidence 22211 1111222 2 233443 32 346999999998863221111 11 22232233445566555332
Q ss_pred ceeEEEEEEcCCCceeeeeeeeccCCcccceEEe-cCcEEEEEECC--CCeEEEEEeecCe
Q 003791 200 SQFHAYQINAMNGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTT--RSILVTVSFKNRK 257 (795)
Q Consensus 200 ~~~~v~ald~~tG~~~w~~~v~~~~~~~~~~~~v-g~~~lv~~d~~--~~~L~v~~l~sg~ 257 (795)
....++.+|+.+|+... +.....-...+.+- .+..+++.... ...+++.++.+++
T Consensus 289 g~~~i~~~d~~~~~~~~---l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~ 346 (415)
T 2hqs_A 289 GRPQVYKVNINGGAPQR---ITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG 346 (415)
T ss_dssp SSCEEEEEETTSSCCEE---CCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC
T ss_pred CCcEEEEEECCCCCEEE---EecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCC
Confidence 23478889999987432 11111111112221 33455554433 2468888888776
No 185
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=94.89 E-value=5.5 Score=43.48 Aligned_cols=203 Identities=12% Similarity=0.068 Sum_probs=100.8
Q ss_pred CCCEEEEEeCCC--EEEEEECcCCccceEE-Ec-C-CcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccC
Q 003791 52 GRKRVVVSTEEN--VIASLDLRHGEIFWRH-VL-G-INDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRG 126 (795)
Q Consensus 52 ~~~~v~vat~~g--~l~ALn~~tG~ivWR~-~l-~-~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~ 126 (795)
+.+.+|+++..+ .|+.+|+.++...-+. .+ . ......++.+...++.+|++..+++|+.||..+|....-.....
T Consensus 181 ~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~ 260 (409)
T 3hrp_A 181 DKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLEL 260 (409)
T ss_dssp TSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCC
T ss_pred CCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccc
Confidence 355788888765 8999999877652222 11 1 11112233222225566666556789999999887543321111
Q ss_pred ccccCCceeccccccccC-CCeEEEEe--CCEEEEEECCCCcEEEEEecc-C-c----------ceeeeeEEEEecCCEE
Q 003791 127 SKHSKPLLLVPTNLKVDK-DSLILVSS--KGCLHAVSSIDGEILWTRDFA-A-E----------SVEVQQVIQLDESDQI 191 (795)
Q Consensus 127 ~~~s~~~~~~~~~~~~~~-~~~V~V~~--~g~l~ald~~tG~~~W~~~~~-~-~----------~~~~~~vv~s~~~~~V 191 (795)
.......+.- ....+. ++.+++.. +++|++++.. |+........ . + -..|..+. ...++.+
T Consensus 261 ~g~~~~~P~~--~ia~~p~~g~lyv~d~~~~~I~~~~~~-g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia-~d~dG~l 336 (409)
T 3hrp_A 261 SGSLGTNPGP--YLIYYFVDSNFYMSDQNLSSVYKITPD-GECEWFCGSATQKTVQDGLREEALFAQPNGMT-VDEDGNF 336 (409)
T ss_dssp CSCCCCSSCC--EEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECTTCCSCBCEEGGGCBCSSEEEEE-ECTTCCE
T ss_pred cCCCCCCccc--cEEEeCCCCEEEEEeCCCCEEEEEecC-CCEEEEEeCCCCCCcCCCcccccEeCCCeEEE-EeCCCCE
Confidence 0000000000 112333 46777763 7889999854 5433222211 0 0 01144443 2345668
Q ss_pred EEEEe-cCCceeEEEEEEcCCCceeeeeeeeccCCc-cc---ceEEecCcEEEEEECCCCeEEEEEeecCeeeeEEEee
Q 003791 192 YVVGY-AGSSQFHAYQINAMNGELLNHETAAFSGGF-VG---DVALVSSDTLVTLDTTRSILVTVSFKNRKIAFQETHL 265 (795)
Q Consensus 192 yvv~~-~g~~~~~v~ald~~tG~~~w~~~v~~~~~~-~~---~~~~vg~~~lv~~d~~~~~L~v~~l~sg~~~~~~~~l 265 (795)
|+... .++ ++..+|+.+|+...-.-.....+. .+ ..-+ ....=+|+|.+ |.|++.|..+.+ ++.+.+
T Consensus 337 yvad~~~~~---~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~-~~P~giavd~~-g~lyVad~~n~~--Ir~i~~ 408 (409)
T 3hrp_A 337 YIVDGFKGY---CLRKLDILDGYVSTVAGQVDVASQIDGTPLEATF-NYPYDICYDGE-GGYWIAEAWGKA--IRKYAV 408 (409)
T ss_dssp EEEETTTTC---EEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCB-SSEEEEEECSS-SEEEEEESTTCE--EEEEEE
T ss_pred EEEeCCCCC---EEEEEECCCCEEEEEeCCCCCCCcCCCChhceEe-CCceEEEEcCC-CCEEEEECCCCe--EEEEEe
Confidence 87654 333 788899888875422210000110 00 0000 11233566654 777777776666 454443
No 186
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=94.78 E-value=4.2 Score=41.91 Aligned_cols=189 Identities=10% Similarity=0.069 Sum_probs=102.5
Q ss_pred CCEEEEEeC---CCEEEEEECcCCccceEEEcCCcceeee-eeeeeCCEEEEEEccC----CeEEEEeCCCCcEeEEEec
Q 003791 53 RKRVVVSTE---ENVIASLDLRHGEIFWRHVLGINDVVDG-IDIALGKYVITLSSDG----STLRAWNLPDGQMVWESFL 124 (795)
Q Consensus 53 ~~~v~vat~---~g~l~ALn~~tG~ivWR~~l~~~~~i~~-l~~~~g~~~V~Vs~~g----~~v~A~d~~tG~llWe~~~ 124 (795)
.+.||+... .+.+.++|+.+++ |+..-+.+..-.+ ..+..++.+++++|.+ ..+..+|+.++ .|+...
T Consensus 11 ~~~l~~~GG~~~~~~~~~~d~~~~~--W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~--~W~~~~ 86 (306)
T 3ii7_A 11 HDYRIALFGGSQPQSCRYFNPKDYS--WTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKD--SWYSKL 86 (306)
T ss_dssp CCEEEEEECCSSTTSEEEEETTTTE--EEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTT--EEEEEE
T ss_pred cceEEEEeCCCCCceEEEecCCCCC--EecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCC--eEEECC
Confidence 355666544 4689999999885 9976433321111 1124566666666633 57999999888 477543
Q ss_pred cCccccCCceeccccccccCCCeEEEEe--C------CEEEEEECCCCcEEEEEeccCcce-eeeeEEEEecCCEEEEEE
Q 003791 125 RGSKHSKPLLLVPTNLKVDKDSLILVSS--K------GCLHAVSSIDGEILWTRDFAAESV-EVQQVIQLDESDQIYVVG 195 (795)
Q Consensus 125 ~~~~~s~~~~~~~~~~~~~~~~~V~V~~--~------g~l~ald~~tG~~~W~~~~~~~~~-~~~~vv~s~~~~~Vyvv~ 195 (795)
.-+........ ... ++.+++.+ + ..+..+|..+++ |+.-.+.+.- ....+ ...++.+|++|
T Consensus 87 ~~p~~r~~~~~-----~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~~~~--W~~~~~~p~~r~~~~~--~~~~~~iyv~G 156 (306)
T 3ii7_A 87 GPPTPRDSLAA-----CAA-EGKIYTSGGSEVGNSALYLFECYDTRTES--WHTKPSMLTQRCSHGM--VEANGLIYVCG 156 (306)
T ss_dssp CCSSCCBSCEE-----EEE-TTEEEEECCBBTTBSCCCCEEEEETTTTE--EEEECCCSSCCBSCEE--EEETTEEEEEC
T ss_pred CCCccccceeE-----EEE-CCEEEEECCCCCCCcEeeeEEEEeCCCCc--eEeCCCCcCCcceeEE--EEECCEEEEEC
Confidence 32211011111 112 56677753 1 358899988774 8765433221 01112 23588999877
Q ss_pred ecCCc------eeEEEEEEcCCCceeeeeeeeccCCcccc-eEEecCcEEEEE--ECC--CCeEEEEEeecCe
Q 003791 196 YAGSS------QFHAYQINAMNGELLNHETAAFSGGFVGD-VALVSSDTLVTL--DTT--RSILVTVSFKNRK 257 (795)
Q Consensus 196 ~~g~~------~~~v~ald~~tG~~~w~~~v~~~~~~~~~-~~~vg~~~lv~~--d~~--~~~L~v~~l~sg~ 257 (795)
-..+. .-.+..+|+.++ .|+..-..|...... +++.++.+++.. +.. ...+.+.|+.+++
T Consensus 157 G~~~~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 227 (306)
T 3ii7_A 157 GSLGNNVSGRVLNSCEVYDPATE--TWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNE 227 (306)
T ss_dssp CEESCTTTCEECCCEEEEETTTT--EEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTE
T ss_pred CCCCCCCcccccceEEEeCCCCC--eEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCc
Confidence 42111 235788999887 476644444444332 333344444332 110 1357777777765
No 187
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=94.77 E-value=4.3 Score=41.63 Aligned_cols=190 Identities=13% Similarity=0.127 Sum_probs=103.6
Q ss_pred CCEEEEEeC-------CCEEEEEECcCCccceEEEcCCcceee-eeeeeeCCEEEEEEccC-----CeEEEEeCCCCc-E
Q 003791 53 RKRVVVSTE-------ENVIASLDLRHGEIFWRHVLGINDVVD-GIDIALGKYVITLSSDG-----STLRAWNLPDGQ-M 118 (795)
Q Consensus 53 ~~~v~vat~-------~g~l~ALn~~tG~ivWR~~l~~~~~i~-~l~~~~g~~~V~Vs~~g-----~~v~A~d~~tG~-l 118 (795)
++.||+... .+.+.++|+.++ .|+..-+.+..-. ......++.+++++|.+ ..+..+|..+++ .
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~--~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~ 91 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQ--EWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDG 91 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTT--EEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCC--eEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCC
Confidence 445666554 357999999887 5987543332111 11123566666666632 469999999886 5
Q ss_pred eEEEeccCccccCCceeccccccccCCCeEEEEe-------CCEEEEEECCCCcEEEEEeccCc--ceeeeeEEEEecCC
Q 003791 119 VWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSS-------KGCLHAVSSIDGEILWTRDFAAE--SVEVQQVIQLDESD 189 (795)
Q Consensus 119 lWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~~-------~g~l~ald~~tG~~~W~~~~~~~--~~~~~~vv~s~~~~ 189 (795)
.|+....-+........ ... ++.+++.+ ...+..+|..+++ |+.-.+.+ .... .+ ...++
T Consensus 92 ~W~~~~~~p~~r~~~~~-----~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~p~~r~~~-~~--~~~~~ 160 (301)
T 2vpj_A 92 VWYSVAPMNVRRGLAGA-----TTL-GDMIYVSGGFDGSRRHTSMERYDPNIDQ--WSMLGDMQTAREGA-GL--VVASG 160 (301)
T ss_dssp CCEEECCCSSCCBSCEE-----EEE-TTEEEEECCBCSSCBCCEEEEEETTTTE--EEEEEECSSCCBSC-EE--EEETT
T ss_pred eeEECCCCCCCccceeE-----EEE-CCEEEEEcccCCCcccceEEEEcCCCCe--EEECCCCCCCcccc-eE--EEECC
Confidence 58866332211011111 112 56677753 2478899988764 76543222 2111 12 23578
Q ss_pred EEEEEEecCC--ceeEEEEEEcCCCceeeeeeeeccCCccc-ceEEecCcEEEEEECC----CCeEEEEEeecCe
Q 003791 190 QIYVVGYAGS--SQFHAYQINAMNGELLNHETAAFSGGFVG-DVALVSSDTLVTLDTT----RSILVTVSFKNRK 257 (795)
Q Consensus 190 ~Vyvv~~~g~--~~~~v~ald~~tG~~~w~~~v~~~~~~~~-~~~~vg~~~lv~~d~~----~~~L~v~~l~sg~ 257 (795)
.+|++|-..+ ..-.+..+|+.++ .|+..-..|..... .++..++.+++..-.. ...+.+.|+.+++
T Consensus 161 ~iyv~GG~~~~~~~~~~~~~d~~~~--~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 233 (301)
T 2vpj_A 161 VIYCLGGYDGLNILNSVEKYDPHTG--HWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDS 233 (301)
T ss_dssp EEEEECCBCSSCBCCCEEEEETTTT--EEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred EEEEECCCCCCcccceEEEEeCCCC--cEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCc
Confidence 8998864321 1235788999886 57664334444433 2333344444432111 2357778887766
No 188
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=94.77 E-value=0.98 Score=49.15 Aligned_cols=66 Identities=8% Similarity=-0.117 Sum_probs=45.5
Q ss_pred ccCCCEEEEEe----------CCCEEEEEECcCCccceEEEcCCc------ceeeeeeeeeCCEEEEEEcc--CCeEEE-
Q 003791 50 KTGRKRVVVST----------EENVIASLDLRHGEIFWRHVLGIN------DVVDGIDIALGKYVITLSSD--GSTLRA- 110 (795)
Q Consensus 50 ~~~~~~v~vat----------~~g~l~ALn~~tG~ivWR~~l~~~------~~i~~l~~~~g~~~V~Vs~~--g~~v~A- 110 (795)
+++.+.+||+. .++.|..+|+.|++++.+..++.. ....++.+..++..+||+.. +..+..
T Consensus 73 spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~ 152 (368)
T 1mda_H 73 GHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLS 152 (368)
T ss_dssp CTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEE
T ss_pred CCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEE
Confidence 34577899997 368999999999999999988621 01123323345556777642 457888
Q ss_pred -EeCCC
Q 003791 111 -WNLPD 115 (795)
Q Consensus 111 -~d~~t 115 (795)
+|+.+
T Consensus 153 ~iD~~t 158 (368)
T 1mda_H 153 VPGASD 158 (368)
T ss_dssp ETTTEE
T ss_pred EEchhh
Confidence 89877
No 189
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=94.74 E-value=0.084 Score=56.11 Aligned_cols=107 Identities=10% Similarity=0.016 Sum_probs=49.5
Q ss_pred CCCEEEEEeCCCEEEEEECcCCc--cceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCc---EeEEEeccC
Q 003791 52 GRKRVVVSTEENVIASLDLRHGE--IFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQ---MVWESFLRG 126 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~--ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~---llWe~~~~~ 126 (795)
+++.+++++.+|.|.-.|..+|+ .+-+.. .....+..+.....+..++.++.++.++.||..+|+ ..-......
T Consensus 22 ~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~ 100 (377)
T 3dwl_C 22 QRTEFVTTTATNQVELYEQDGNGWKHARTFS-DHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLN 100 (377)
T ss_dssp SSSEEECCCSSSCBCEEEEETTEEEECCCBC-CCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCS
T ss_pred CCCEEEEecCCCEEEEEEccCCceEEEEEEe-cCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccC
Confidence 35668888899999999988883 222211 111234444222333444445556799999999998 322222222
Q ss_pred ccccCCceeccccccccCCCeEEEE-eCCEEEEEECCCCcE
Q 003791 127 SKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEI 166 (795)
Q Consensus 127 ~~~s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~ 166 (795)
... ..+.. ..+ ++.++.. .++.+...|..+++.
T Consensus 101 ~~v----~~~~~--~~~-~~~l~~~~~d~~i~iwd~~~~~~ 134 (377)
T 3dwl_C 101 RAA----TFVRW--SPN-EDKFAVGSGARVISVCYFEQEND 134 (377)
T ss_dssp SCE----EEEEC--CTT-SSCCEEEESSSCEEECCC-----
T ss_pred Cce----EEEEE--CCC-CCEEEEEecCCeEEEEEECCccc
Confidence 111 11110 112 2334444 488888888888764
No 190
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=94.73 E-value=1.8 Score=45.84 Aligned_cols=198 Identities=11% Similarity=0.041 Sum_probs=95.0
Q ss_pred cCCCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeee-eeee-eCCEEEEEE---------------------ccCCe
Q 003791 51 TGRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDG-IDIA-LGKYVITLS---------------------SDGST 107 (795)
Q Consensus 51 ~~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~-l~~~-~g~~~V~Vs---------------------~~g~~ 107 (795)
++++.|++++.++.|+.+|..+|+..--...+....... .... .+..++.+. +....
T Consensus 90 pdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (388)
T 3pe7_A 90 PDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCR 169 (388)
T ss_dssp TTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEE
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcce
Confidence 456779999988999999999998765444443311001 1011 122222211 12357
Q ss_pred EEEEeCCCCcEeEEEeccCccccCCceeccccccc-cCCCeEE-EEe------CCEEEEEECCCCcEEEEEeccCcceee
Q 003791 108 LRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKV-DKDSLIL-VSS------KGCLHAVSSIDGEILWTRDFAAESVEV 179 (795)
Q Consensus 108 v~A~d~~tG~llWe~~~~~~~~s~~~~~~~~~~~~-~~~~~V~-V~~------~g~l~ald~~tG~~~W~~~~~~~~~~~ 179 (795)
|+.||..+|+..--....... ..+.+ .. + ++.++ +.. ...|+.+|..+++..--........ .
T Consensus 170 l~~~d~~~g~~~~l~~~~~~~--~~~~~-----sp~d-g~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~-~ 240 (388)
T 3pe7_A 170 LMRVDLKTGESTVILQENQWL--GHPIY-----RPYD-DSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGES-C 240 (388)
T ss_dssp EEEEETTTCCEEEEEEESSCE--EEEEE-----ETTE-EEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEE-E
T ss_pred EEEEECCCCceEEeecCCccc--cccEE-----CCCC-CCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcc-c
Confidence 999999999865443322211 11111 12 2 22232 222 2268888876665432211111111 1
Q ss_pred eeEEEEecCCEEEEEEec-CCceeEEEEEEcCCCceeeeeeeecc----CCcccceEEecCcEEEEEE--------CCCC
Q 003791 180 QQVIQLDESDQIYVVGYA-GSSQFHAYQINAMNGELLNHETAAFS----GGFVGDVALVSSDTLVTLD--------TTRS 246 (795)
Q Consensus 180 ~~vv~s~~~~~Vyvv~~~-g~~~~~v~ald~~tG~~~w~~~v~~~----~~~~~~~~~vg~~~lv~~d--------~~~~ 246 (795)
..+..+.++..+++++.. +.....++.+|+.+|+...-...... ....+......+..+++.. ....
T Consensus 241 ~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~ 320 (388)
T 3pe7_A 241 THEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDP 320 (388)
T ss_dssp EEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCC
T ss_pred ccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCC
Confidence 122223345556444544 33334689999999986432211110 0111122222333333321 3345
Q ss_pred eEEEEEeecCe
Q 003791 247 ILVTVSFKNRK 257 (795)
Q Consensus 247 ~L~v~~l~sg~ 257 (795)
.+++.++.+++
T Consensus 321 ~i~~~d~~~~~ 331 (388)
T 3pe7_A 321 FLYVFNMKNGT 331 (388)
T ss_dssp EEEEEETTTTE
T ss_pred EEEEEeccCCc
Confidence 78888888876
No 191
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=94.73 E-value=1.1 Score=48.18 Aligned_cols=118 Identities=14% Similarity=0.159 Sum_probs=68.7
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccC
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~ 131 (795)
..+.++.++.++.|.-.|.+.+...-+........+..+.....+..++.++.++.++.||..+|+.+-.+.........
T Consensus 217 ~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~ 296 (380)
T 3iz6_a 217 NANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDN 296 (380)
T ss_dssp SCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCC
T ss_pred CCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccccccccc
Confidence 35668889999999999988543333333222333444422223334444666789999999999988766543221100
Q ss_pred CceeccccccccCC-CeEEEE-eCCEEEEEECCCCcEEEEE
Q 003791 132 PLLLVPTNLKVDKD-SLILVS-SKGCLHAVSSIDGEILWTR 170 (795)
Q Consensus 132 ~~~~~~~~~~~~~~-~~V~V~-~~g~l~ald~~tG~~~W~~ 170 (795)
....+. ......+ ..++.. .+|.++..|..+|+.....
T Consensus 297 ~~~~v~-~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~ 336 (380)
T 3iz6_a 297 ELPIVT-SVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNL 336 (380)
T ss_dssp SSCSCS-EEEECSSSSEEEEECTTSCEEEEETTTCCEEEEE
T ss_pred ccCceE-EEEECCCCCEEEEEECCCCEEEEECCCCceEEEE
Confidence 000000 0011113 344444 4899999999999887766
No 192
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=94.63 E-value=0.68 Score=52.74 Aligned_cols=147 Identities=18% Similarity=0.194 Sum_probs=78.9
Q ss_pred EEEEECcCCccceEEEcCCc-ceee-------------eeeee--eCC--EEEEEEcc--CCeEEEEeCCCCcE--eEEE
Q 003791 65 IASLDLRHGEIFWRHVLGIN-DVVD-------------GIDIA--LGK--YVITLSSD--GSTLRAWNLPDGQM--VWES 122 (795)
Q Consensus 65 l~ALn~~tG~ivWR~~l~~~-~~i~-------------~l~~~--~g~--~~V~Vs~~--g~~v~A~d~~tG~l--lWe~ 122 (795)
|..+|-+||+.+|+.....+ +.+. ...++ .++ .+|+.-+. -..|.|||..+|++ +|++
T Consensus 231 L~vfdG~TG~~l~~~~~~p~rg~~~~WGD~ygnR~drf~~~vayLDG~~Ps~v~~rGyYtr~~v~A~d~~~~~L~~~W~~ 310 (591)
T 2zux_A 231 LTVFQGSTGKELVTANFEPARGNVSDWGDSYGNRVDRFLAGIAYLDGQRPSLIMTRGYYAKTMLVAYNFRDGKLSKLWTL 310 (591)
T ss_dssp EEEEETTTCCEEEEEECSSCCCCGGGGTCSSSSGGGCEEEEEECTTSSSCEEEEEECCSSSCEEEEEEEETTEEEEEEEE
T ss_pred EEEEeCCCCCEEecccCCCCCCcccccccccccccccceeeEEECCCCCceEEEeccccceeEEEEEECCCCceEEEEEe
Confidence 89999999999999988532 2111 01011 122 24443332 24699999999975 9999
Q ss_pred eccCcc---c-c--CCceeccccccccCCC--eEEEEeCCEEEEEECCCCcEEEEEeccCccee-eeeEEEEecCCEEEE
Q 003791 123 FLRGSK---H-S--KPLLLVPTNLKVDKDS--LILVSSKGCLHAVSSIDGEILWTRDFAAESVE-VQQVIQLDESDQIYV 193 (795)
Q Consensus 123 ~~~~~~---~-s--~~~~~~~~~~~~~~~~--~V~V~~~g~l~ald~~tG~~~W~~~~~~~~~~-~~~vv~s~~~~~Vyv 193 (795)
....+. . . ...+.+. .+++++ .|++. +. ++| .+|+.+|......+... ...+-+...+-.||.
T Consensus 311 d~~~~~~~~~~gqg~h~~~va---DVDgDG~dEIv~G--s~--~iD-~dG~~L~st~~gHGDa~hv~dldP~r~GlEv~~ 382 (591)
T 2zux_A 311 DSSKSGNEAFAGQGNHNLSIA---DVDGDGKDEIIFG--SM--AVD-HDGKGMYSTGLGHGDALHTGDLDPGRPGLEVFQ 382 (591)
T ss_dssp ETTSTTCGGGSSCCCSCCEEE---CCSSSSSCEEEET--TE--EEC-TTSCEEEECSCCCCSCEEEECCCTTSSSCEEEE
T ss_pred cCCCCCcccccccCCCCCeeE---eCCCCCCceEEEe--ee--EEC-CCCCEeeeCCCCCCCeeEEeecCCCCCCcEEEE
Confidence 876431 1 0 0111222 344433 34442 22 455 89999999877543320 000100011234665
Q ss_pred EEecCCceeEEEEEEcCCCceeeeee
Q 003791 194 VGYAGSSQFHAYQINAMNGELLNHET 219 (795)
Q Consensus 194 v~~~g~~~~~v~ald~~tG~~~w~~~ 219 (795)
+.-.+....-....|+.||+++|+..
T Consensus 383 ~~E~~~~~~G~~~~dA~tG~vlw~~~ 408 (591)
T 2zux_A 383 VHEDKNAKYGLSFRDAATGKILWGVY 408 (591)
T ss_dssp ECCCTTSSCSEEEEETTTCCEEEEEC
T ss_pred EecCCCCCCccEEEECCCCcEEEEcC
Confidence 43321111113347999999999984
No 193
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=94.62 E-value=4.7 Score=41.44 Aligned_cols=189 Identities=14% Similarity=0.104 Sum_probs=100.3
Q ss_pred CCEEEEEeC-----CCEEEEEECcCCccceEEEcCCcceeee-eeeeeCCEEEEEEccC-----CeEEEEeCCCCcEeEE
Q 003791 53 RKRVVVSTE-----ENVIASLDLRHGEIFWRHVLGINDVVDG-IDIALGKYVITLSSDG-----STLRAWNLPDGQMVWE 121 (795)
Q Consensus 53 ~~~v~vat~-----~g~l~ALn~~tG~ivWR~~l~~~~~i~~-l~~~~g~~~V~Vs~~g-----~~v~A~d~~tG~llWe 121 (795)
++.||+... .+.+.++|+.+++ |+..-+.+..-.. ..+..++.+++++|.+ ..+..+|+.+++ |+
T Consensus 15 ~~~i~v~GG~~~~~~~~~~~~d~~~~~--W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~--W~ 90 (302)
T 2xn4_A 15 PKLMVVVGGQAPKAIRSVECYDFKEER--WHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQ--WT 90 (302)
T ss_dssp CEEEEEECCBSSSBCCCEEEEETTTTE--EEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTE--EE
T ss_pred CCEEEEECCCCCCCCCcEEEEcCcCCc--EeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCc--ee
Confidence 445666544 2568999999874 9986433321111 1123566666666632 358899998875 87
Q ss_pred EeccCccccCCceeccccccccCCCeEEEEe--C-----CEEEEEECCCCcEEEEEeccCcce-eeeeEEEEecCCEEEE
Q 003791 122 SFLRGSKHSKPLLLVPTNLKVDKDSLILVSS--K-----GCLHAVSSIDGEILWTRDFAAESV-EVQQVIQLDESDQIYV 193 (795)
Q Consensus 122 ~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~~--~-----g~l~ald~~tG~~~W~~~~~~~~~-~~~~vv~s~~~~~Vyv 193 (795)
....-+........ ... ++.+++.+ + ..+..+|..++ .|+.-.+.+.- ....+ ...++.+|+
T Consensus 91 ~~~~~p~~r~~~~~-----~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~--~W~~~~~~p~~r~~~~~--~~~~~~iyv 160 (302)
T 2xn4_A 91 SVANMRDRRSTLGA-----AVL-NGLLYAVGGFDGSTGLSSVEAYNIKSN--EWFHVAPMNTRRSSVGV--GVVGGLLYA 160 (302)
T ss_dssp EECCCSSCCBSCEE-----EEE-TTEEEEEEEECSSCEEEEEEEEETTTT--EEEEECCCSSCCBSCEE--EEETTEEEE
T ss_pred eCCCCCccccceEE-----EEE-CCEEEEEcCCCCCccCceEEEEeCCCC--eEeecCCCCCcccCceE--EEECCEEEE
Confidence 65432211011111 112 46666653 2 36888888876 47764433221 01112 235788998
Q ss_pred EEecCCc----eeEEEEEEcCCCceeeeeeeeccCCccc-ceEEecCcEEEEEECC----CCeEEEEEeecCe
Q 003791 194 VGYAGSS----QFHAYQINAMNGELLNHETAAFSGGFVG-DVALVSSDTLVTLDTT----RSILVTVSFKNRK 257 (795)
Q Consensus 194 v~~~g~~----~~~v~ald~~tG~~~w~~~v~~~~~~~~-~~~~vg~~~lv~~d~~----~~~L~v~~l~sg~ 257 (795)
+|-..+. .-.+..+|+.++ .|+..-..|..... .+.+.++.+++..-.+ ...+.+.|+.+++
T Consensus 161 ~GG~~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 161 VGGYDVASRQCLSTVECYNATTN--EWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNA 231 (302)
T ss_dssp ECCEETTTTEECCCEEEEETTTT--EEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTE
T ss_pred EeCCCCCCCccccEEEEEeCCCC--cEEECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCC
Confidence 7643111 125788998876 46664344444433 2333344444432111 2357778877766
No 194
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=94.60 E-value=5.3 Score=42.88 Aligned_cols=110 Identities=19% Similarity=0.240 Sum_probs=62.7
Q ss_pred EEEEEeCCCEEEEEECcCCccceEEEcCCc----ceeeeeeee--e-----CCEEEEE-EccCCeEEEEeCCCCcEeEEE
Q 003791 55 RVVVSTEENVIASLDLRHGEIFWRHVLGIN----DVVDGIDIA--L-----GKYVITL-SSDGSTLRAWNLPDGQMVWES 122 (795)
Q Consensus 55 ~v~vat~~g~l~ALn~~tG~ivWR~~l~~~----~~i~~l~~~--~-----g~~~V~V-s~~g~~v~A~d~~tG~llWe~ 122 (795)
.+..++.++.|.-.|.++|+..-.+.+..- +.+..+... . .++.+++ ++.++++|.||..++...-..
T Consensus 103 ~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~ 182 (393)
T 4gq1_A 103 FLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAG 182 (393)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEE
T ss_pred EEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeee
Confidence 466788899999999999988776665321 223322111 0 1233333 456789999999988876655
Q ss_pred eccCccccCCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEE
Q 003791 123 FLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTR 170 (795)
Q Consensus 123 ~~~~~~~s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~ 170 (795)
....... ....+.| +....++.. .+|.+...|..+|+...+.
T Consensus 183 ~~~~~~v-~~v~~~p-----~~~~~l~~~~~d~~v~~wd~~t~~~~~~~ 225 (393)
T 4gq1_A 183 YPLSSPG-ISVQFRP-----SNPNQLIVGERNGNIRIFDWTLNLSAEEN 225 (393)
T ss_dssp EECSSCE-EEEEEET-----TEEEEEEEEETTSEEEEEETTCCC-----
T ss_pred cCCCCCc-EEEEECC-----CCCceEEecCCCCEEEEEECCCCcccccc
Confidence 4333222 1122222 211234444 4899999999999876554
No 195
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=94.60 E-value=4.8 Score=41.43 Aligned_cols=189 Identities=13% Similarity=0.075 Sum_probs=105.0
Q ss_pred CCEEEEEeC-----CCEEEEEECcCCccceEEEcCCcceeee-eeeeeCCEEEEEEccC------CeEEEEeCCCCcEeE
Q 003791 53 RKRVVVSTE-----ENVIASLDLRHGEIFWRHVLGINDVVDG-IDIALGKYVITLSSDG------STLRAWNLPDGQMVW 120 (795)
Q Consensus 53 ~~~v~vat~-----~g~l~ALn~~tG~ivWR~~l~~~~~i~~-l~~~~g~~~V~Vs~~g------~~v~A~d~~tG~llW 120 (795)
+++||+... .+.+..+|+.++ .|+..-+.+..-.. .....++.+++++|.+ ..+..||..+++ |
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~--~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~--W 130 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKD--SWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTES--W 130 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTT--EEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTE--E
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCC--eEEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCc--e
Confidence 677887754 368999999988 59876543321111 1124566666666532 458999998875 8
Q ss_pred EEeccCccccCCceeccccccccCCCeEEEEe-----------CCEEEEEECCCCcEEEEEeccCcce-eeeeEEEEecC
Q 003791 121 ESFLRGSKHSKPLLLVPTNLKVDKDSLILVSS-----------KGCLHAVSSIDGEILWTRDFAAESV-EVQQVIQLDES 188 (795)
Q Consensus 121 e~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~~-----------~g~l~ald~~tG~~~W~~~~~~~~~-~~~~vv~s~~~ 188 (795)
+....-+....... ....++.+++.+ -..+..+|..++ .|+.-.+.+.- ....+ ...+
T Consensus 131 ~~~~~~p~~r~~~~------~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~--~~~~ 200 (306)
T 3ii7_A 131 HTKPSMLTQRCSHG------MVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATE--TWTELCPMIEARKNHGL--VFVK 200 (306)
T ss_dssp EEECCCSSCCBSCE------EEEETTEEEEECCEESCTTTCEECCCEEEEETTTT--EEEEECCCSSCCBSCEE--EEET
T ss_pred EeCCCCcCCcceeE------EEEECCEEEEECCCCCCCCcccccceEEEeCCCCC--eEEECCCccchhhcceE--EEEC
Confidence 76533221101111 111256677753 245889998887 58765433221 01112 2357
Q ss_pred CEEEEEEecCCc--eeEEEEEEcCCCceeeeeeeeccCCccc-ceEEecCcEEEEEEC----CCCeEEEEEeecCe
Q 003791 189 DQIYVVGYAGSS--QFHAYQINAMNGELLNHETAAFSGGFVG-DVALVSSDTLVTLDT----TRSILVTVSFKNRK 257 (795)
Q Consensus 189 ~~Vyvv~~~g~~--~~~v~ald~~tG~~~w~~~v~~~~~~~~-~~~~vg~~~lv~~d~----~~~~L~v~~l~sg~ 257 (795)
+.+|++|-..+. .-.+..+|+.+++ |+..-..|..... .+.++++.+++..-. ....+.+.|+.+++
T Consensus 201 ~~i~v~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 201 DKIFAVGGQNGLGGLDNVEYYDIKLNE--WKMVSPMPWKGVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp TEEEEECCEETTEEBCCEEEEETTTTE--EEECCCCSCCBSCCEEEEETTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred CEEEEEeCCCCCCCCceEEEeeCCCCc--EEECCCCCCCccceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 889987643211 1257889998874 7764344443333 333335444444321 12457778877766
No 196
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=94.59 E-value=4.9 Score=42.03 Aligned_cols=145 Identities=12% Similarity=0.067 Sum_probs=74.4
Q ss_pred CCEEEEEe-CCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccC
Q 003791 53 RKRVVVST-EENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (795)
Q Consensus 53 ~~~v~vat-~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~ 131 (795)
++.+|+.+ ..+.|..+|+++|+.. ...++. .+.++....++. ++++.. ..|+.||..+|+..--...... . .
T Consensus 60 ~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~~~--~v~~i~~~~dg~-l~v~~~-~gl~~~d~~~g~~~~~~~~~~~-~-~ 132 (326)
T 2ghs_A 60 SGTAWWFNILERELHELHLASGRKT-VHALPF--MGSALAKISDSK-QLIASD-DGLFLRDTATGVLTLHAELESD-L-P 132 (326)
T ss_dssp TTEEEEEEGGGTEEEEEETTTTEEE-EEECSS--CEEEEEEEETTE-EEEEET-TEEEEEETTTCCEEEEECSSTT-C-T
T ss_pred CCEEEEEECCCCEEEEEECCCCcEE-EEECCC--cceEEEEeCCCe-EEEEEC-CCEEEEECCCCcEEEEeeCCCC-C-C
Confidence 45665554 6789999999998753 122322 233342223334 444443 3599999999986533222111 0 0
Q ss_pred CceeccccccccCCCeEEEEe--------CCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeE
Q 003791 132 PLLLVPTNLKVDKDSLILVSS--------KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFH 203 (795)
Q Consensus 132 ~~~~~~~~~~~~~~~~V~V~~--------~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~ 203 (795)
..... ....+.++.+++.. .+.|++++ +|+..-..... . .+..+..+..+..+|+.....+ .
T Consensus 133 ~~~~~--~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~--~-~~~~i~~s~dg~~lyv~~~~~~---~ 202 (326)
T 2ghs_A 133 GNRSN--DGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADI--S-IPNSICFSPDGTTGYFVDTKVN---R 202 (326)
T ss_dssp TEEEE--EEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEE--S-SEEEEEECTTSCEEEEEETTTC---E
T ss_pred CCCCC--CEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCC--c-ccCCeEEcCCCCEEEEEECCCC---E
Confidence 00000 11334456677653 26899998 67654322110 0 1222322223446777543332 6
Q ss_pred EEEEEcC--CC-ce
Q 003791 204 AYQINAM--NG-EL 214 (795)
Q Consensus 204 v~ald~~--tG-~~ 214 (795)
+..+|.. +| +.
T Consensus 203 I~~~d~~~~~Gl~~ 216 (326)
T 2ghs_A 203 LMRVPLDARTGLPT 216 (326)
T ss_dssp EEEEEBCTTTCCBS
T ss_pred EEEEEcccccCCcc
Confidence 7777765 78 53
No 197
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=94.58 E-value=3.4 Score=44.16 Aligned_cols=149 Identities=15% Similarity=0.242 Sum_probs=88.9
Q ss_pred CCEEEEEEc-cCCeEEEEeCCCCcEeEEEeccCcc--ccCCceeccccccc---cCCCeEEEE-e--------------C
Q 003791 95 GKYVITLSS-DGSTLRAWNLPDGQMVWESFLRGSK--HSKPLLLVPTNLKV---DKDSLILVS-S--------------K 153 (795)
Q Consensus 95 g~~~V~Vs~-~g~~v~A~d~~tG~llWe~~~~~~~--~s~~~~~~~~~~~~---~~~~~V~V~-~--------------~ 153 (795)
.++.+++|+ ..+.|..||+.+|.. .+....... ........+ ... +.++.++|. . +
T Consensus 23 ~~g~~~vs~l~~g~V~~~~~~~~~~-~~~~~~~~s~~g~~~~~~sG--l~~~~~D~~grL~vv~~~~~af~~~g~~~~g~ 99 (334)
T 2p9w_A 23 TRQVFYQSNLYKGRIEVYNPKTQSH-FNVVIDGASSNGDGEQQMSG--LSLLTHDNSKRLFAVMKNAKSFNFADQSSHGA 99 (334)
T ss_dssp TTTEEEEEETTTTEEEEECTTTCCE-EEECCTTTCCSSCCSEEEEE--EEESSSSSCCEEEEEEEETTTTCTTSCCSSSC
T ss_pred CCCEEEEEeccCCEEEEEcCCCCeE-EEEecCCccccCCCcceeeE--EEEeccCCCCcEEEEEcccccccccccccCCC
Confidence 357888887 578999999976654 355333211 000111112 233 345666663 3 4
Q ss_pred CEEEEEECC---CCcEEEEEeccCcc-----------eeeeeEEEEecCCEEEEEEecC-CceeEEEEEEcCCCcee--e
Q 003791 154 GCLHAVSSI---DGEILWTRDFAAES-----------VEVQQVIQLDESDQIYVVGYAG-SSQFHAYQINAMNGELL--N 216 (795)
Q Consensus 154 g~l~ald~~---tG~~~W~~~~~~~~-----------~~~~~vv~s~~~~~Vyvv~~~g-~~~~~v~ald~~tG~~~--w 216 (795)
..|.++|.. +|+++|...++... ..+-.+. ....|.+||.+..+ + .++-+|+. |+.+ |
T Consensus 100 ~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDva-vD~~GnaYVt~s~~~~---~I~rV~pd-G~~~~~~ 174 (334)
T 2p9w_A 100 SSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSA-QDRDGNSYVAFALGMP---AIARVSAD-GKTVSTF 174 (334)
T ss_dssp CEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEE-ECTTSCEEEEEEESSC---EEEEECTT-SCCEEEE
T ss_pred CEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeE-ECCCCCEEEeCCCCCC---eEEEEeCC-CCEEeee
Confidence 789999999 99999999875211 0011222 34678899966555 4 68888874 5532 3
Q ss_pred eeeeecc-----CCcccceEEe-cCcEEEEEECCCCeEEEEEeec
Q 003791 217 HETAAFS-----GGFVGDVALV-SSDTLVTLDTTRSILVTVSFKN 255 (795)
Q Consensus 217 ~~~v~~~-----~~~~~~~~~v-g~~~lv~~d~~~~~L~v~~l~s 255 (795)
-. ..+ .++.+ +++. .++.++..+. .+.|...|+.+
T Consensus 175 ~~--~~~~~~~~~G~nG-Iv~~pdg~~Liv~~~-~g~L~~fD~~~ 215 (334)
T 2p9w_A 175 AW--ESGNGGQRPGYSG-ITFDPHSNKLIAFGG-PRALTAFDVSK 215 (334)
T ss_dssp EE--CCCCSSSCCSCSE-EEEETTTTEEEEESS-SSSEEEEECSS
T ss_pred ee--cCCCcccccCcce-EEEeCCCCEEEEEcC-CCeEEEEcCCC
Confidence 22 222 12333 4444 5668888887 89999999884
No 198
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=94.57 E-value=4.5 Score=40.94 Aligned_cols=148 Identities=9% Similarity=0.057 Sum_probs=83.5
Q ss_pred EEEEeCCCEEEEEECcCCccceEEEcCCc-ceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccCCce
Q 003791 56 VVVSTEENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKPLL 134 (795)
Q Consensus 56 v~vat~~g~l~ALn~~tG~ivWR~~l~~~-~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~~~~ 134 (795)
+++++.++.|.--|..||+.+-...+... ..+..+.....+..++.++.++.|+.||..+|+.+.......... .
T Consensus 38 ~lAvg~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~----~ 113 (318)
T 4ggc_A 38 VLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARV----G 113 (318)
T ss_dssp EEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCE----E
T ss_pred EEEEEeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceE----E
Confidence 44444578899999999999887776554 234444333344455546667899999999999998887654332 1
Q ss_pred eccccccccCCCeEEEEe-CCEEEEEECCCCcEEE-EEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcCCC
Q 003791 135 LVPTNLKVDKDSLILVSS-KGCLHAVSSIDGEILW-TRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNG 212 (795)
Q Consensus 135 ~~~~~~~~~~~~~V~V~~-~g~l~ald~~tG~~~W-~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~tG 212 (795)
.. ... ...++..+ ++.+...+..++...- ........ ...+.....+..++..+.+| .+...|..+|
T Consensus 114 ~~----~~~-~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~s~~~d~----~i~iwd~~~~ 182 (318)
T 4ggc_A 114 SL----SWN-SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQE--VCGLRWAPDGRHLASGGNDN----LVNVWPSAPG 182 (318)
T ss_dssp EE----EEE-TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSC--EEEEEECTTSSEEEEEETTS----CEEEEESSCB
T ss_pred Ee----ecC-CCEEEEEecCCceEeeecCCCceeEEEEcCccCc--eEEEEEcCCCCEEEEEecCc----ceeEEECCCC
Confidence 11 111 23333333 6666666666554322 22111111 11121122334444444444 5777899988
Q ss_pred ceeeee
Q 003791 213 ELLNHE 218 (795)
Q Consensus 213 ~~~w~~ 218 (795)
+.....
T Consensus 183 ~~~~~~ 188 (318)
T 4ggc_A 183 EGGWVP 188 (318)
T ss_dssp TTBSCC
T ss_pred cccccc
Confidence 765443
No 199
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=94.56 E-value=8.4 Score=44.08 Aligned_cols=143 Identities=12% Similarity=0.034 Sum_probs=79.3
Q ss_pred EEEEccCCeEEEEeCCCCcEeEEEeccCccccCCceeccccccccCCCeEEE-E-eCCEEEEEECCCCcEEEEEecc---
Q 003791 99 ITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILV-S-SKGCLHAVSSIDGEILWTRDFA--- 173 (795)
Q Consensus 99 V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V-~-~~g~l~ald~~tG~~~W~~~~~--- 173 (795)
++.++.++.++.||..+|+.+-......... ....+- .++..++ . .|+.+...|..+|+..-.+...
T Consensus 163 l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V-~~v~fs-------pdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~ 234 (611)
T 1nr0_A 163 IISGSDDNTVAIFEGPPFKFKSTFGEHTKFV-HSVRYN-------PDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLK 234 (611)
T ss_dssp EEEEETTSCEEEEETTTBEEEEEECCCSSCE-EEEEEC-------TTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSS
T ss_pred EEEEeCCCeEEEEECCCCeEeeeeccccCce-EEEEEC-------CCCCEEEEEECCCcEEEEECCCCcEeeeecccccc
Confidence 4435567799999999988766554433222 111121 1344444 3 3899999999999877655321
Q ss_pred --CcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcCCCceeeeeeeeccCCccc---ceEEecCcEEEEEECCCCeE
Q 003791 174 --AESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHETAAFSGGFVG---DVALVSSDTLVTLDTTRSIL 248 (795)
Q Consensus 174 --~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~tG~~~w~~~v~~~~~~~~---~~~~vg~~~lv~~d~~~~~L 248 (795)
.....+..+..+..+..+...+.++ .+...|..+|+.+.+..... .... .+.+ .++.++.... .+.+
T Consensus 235 ~~~h~~~V~~v~~spdg~~l~s~s~D~----~v~lWd~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~l~s~s~-d~~i 306 (611)
T 1nr0_A 235 NVAHSGSVFGLTWSPDGTKIASASADK----TIKIWNVATLKVEKTIPVGT--RIEDQQLGIIW-TKQALVSISA-NGFI 306 (611)
T ss_dssp SCSSSSCEEEEEECTTSSEEEEEETTS----EEEEEETTTTEEEEEEECCS--SGGGCEEEEEE-CSSCEEEEET-TCCE
T ss_pred ccccCCCEEEEEECCCCCEEEEEeCCC----eEEEEeCCCCceeeeecCCC--CccceeEEEEE-cCCEEEEEeC-CCcE
Confidence 1111122332222334444444444 68888999998876654321 1111 1222 4455555553 5777
Q ss_pred EEEEeecCe
Q 003791 249 VTVSFKNRK 257 (795)
Q Consensus 249 ~v~~l~sg~ 257 (795)
...++.+++
T Consensus 307 ~~~~~~~~~ 315 (611)
T 1nr0_A 307 NFVNPELGS 315 (611)
T ss_dssp EEEETTTTE
T ss_pred EEEeCCCCC
Confidence 777776665
No 200
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=94.49 E-value=2.2 Score=49.28 Aligned_cols=144 Identities=13% Similarity=0.121 Sum_probs=87.2
Q ss_pred cCCCEEEEEeC------------------CCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccC-------
Q 003791 51 TGRKRVVVSTE------------------ENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDG------- 105 (795)
Q Consensus 51 ~~~~~v~vat~------------------~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g------- 105 (795)
++.+.||++++ +|.+.++|.++.+++|+...+.. ..++.+.-+++.+|+++.+
T Consensus 145 p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg~--pd~~~~spdGk~~~vt~~~se~~~~i 222 (595)
T 1fwx_A 145 PRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSGN--LDNCDADYEGKWAFSTSYNSEKGMTL 222 (595)
T ss_dssp SBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESSC--CCCEEECSSSSEEEEEESCTTCCSSH
T ss_pred CCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCCC--ccceEECCCCCEEEEEecCcccCcch
Confidence 35778999963 46899999999999999998543 2333223344555555422
Q ss_pred -------------------------------CeEEEEeCCC--CcE-eEEEeccCccccCCceeccccccccCCCeEEEE
Q 003791 106 -------------------------------STLRAWNLPD--GQM-VWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS 151 (795)
Q Consensus 106 -------------------------------~~v~A~d~~t--G~l-lWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~ 151 (795)
+.|..+|..+ |+. +-..+...... ...+ ..+ ++.++|.
T Consensus 223 ~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~Ph--Gv~~-----sPD-Gk~v~V~ 294 (595)
T 1fwx_A 223 PEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPH--GCNM-----APD-KKHLCVA 294 (595)
T ss_dssp HHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEESSCC--CEEE-----CTT-SSEEEEE
T ss_pred hhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecCCCce--EEEE-----cCC-CCEEEEe
Confidence 1377777777 655 44554433221 1112 223 4567776
Q ss_pred e--CCEEEEEECCCCc------------EEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcCC
Q 003791 152 S--KGCLHAVSSIDGE------------ILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMN 211 (795)
Q Consensus 152 ~--~g~l~ald~~tG~------------~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~t 211 (795)
. ++++..+|.++.+ +..+..... -|..+.. ..++.+|+..+-.+ .+..+|.++
T Consensus 295 ~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~---gP~h~aF-~~dG~aY~t~~lds---qV~kwdi~~ 361 (595)
T 1fwx_A 295 GKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGL---GPLHTAF-DGRGNAYTSLFLDS---QVVKWNIED 361 (595)
T ss_dssp CTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCS---CEEEEEE-CTTSEEEEEETTTT---EEEEEEHHH
T ss_pred CCCCCeEEEEECcccccccccccCcccceEEEcCCCC---CcceEEE-CCCCeEEEEEecCC---cEEEEEhhH
Confidence 3 7889999998653 344433322 2555543 23458887666554 677788777
No 201
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=94.38 E-value=8.1 Score=43.13 Aligned_cols=182 Identities=17% Similarity=0.190 Sum_probs=89.8
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccC
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~ 131 (795)
++..+++++.++.+.-.|. +|+..-.. ......+..+....++..++.++.++.++.||.....+. ......... .
T Consensus 273 d~~~l~~~~~d~~i~~w~~-~~~~~~~~-~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~-~~~~~~~~v-~ 348 (577)
T 2ymu_A 273 DGQTIASASDDKTVKLWNR-NGQLLQTL-TGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQ-TLTGHSSSV-W 348 (577)
T ss_dssp TSSEEEEEETTSCEEEEET-TSCEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEE-EECCCSSCE-E
T ss_pred CCCEEEEEeCCCEEEEEeC-CCcEEEEE-ecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeE-EEeCCCCCE-E
Confidence 4567888999999988885 56543322 222223444422233344544555679999998655543 333222211 1
Q ss_pred CceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcC
Q 003791 132 PLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAM 210 (795)
Q Consensus 132 ~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~ 210 (795)
...+.+ + ...++.. .+|.+...| .+|+...+........ ..+..+..+..+...+.++ .+..+| .
T Consensus 349 ~~~~s~-----~-g~~l~~~~~dg~v~~~~-~~~~~~~~~~~~~~~v--~~~~~s~dg~~l~~~~~d~----~v~~~~-~ 414 (577)
T 2ymu_A 349 GVAFSP-----D-GQTIASASDDKTVKLWN-RNGQLLQTLTGHSSSV--RGVAFSPDGQTIASASDDK----TVKLWN-R 414 (577)
T ss_dssp EEEECT-----T-SSEEEEEETTSEEEEEE-TTCCEEEEEECCSSCE--EEEEECTTSSCEEEEETTS----EEEEEC-T
T ss_pred EEEECC-----C-CCEEEEEeCCCEEEEEc-CCCCEEEEecCCCCCe--EEEEECCCCCEEEEEeCCC----EEEEEe-C
Confidence 111111 1 2334444 378888888 5777776665433322 2232122233343333333 566667 4
Q ss_pred CCceeeeeeeeccCCcccceEEe-cCcEEEEEECCCCeEEEEEee
Q 003791 211 NGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFK 254 (795)
Q Consensus 211 tG~~~w~~~v~~~~~~~~~~~~v-g~~~lv~~d~~~~~L~v~~l~ 254 (795)
+|+.+..... ....+. .+.+- ++..++... ..+.+.+-++.
T Consensus 415 ~~~~~~~~~~-~~~~v~-~~~~s~d~~~l~~~~-~d~~v~~w~~~ 456 (577)
T 2ymu_A 415 NGQLLQTLTG-HSSSVW-GVAFSPDDQTIASAS-DDKTVKLWNRN 456 (577)
T ss_dssp TCCEEEEEEC-CSSCEE-EEEECTTSSEEEEEE-TTSEEEEEETT
T ss_pred CCCEEEEecC-CCCCeE-EEEECCCCCEEEEEc-CCCEEEEEECC
Confidence 6776654421 111111 12221 334555544 35677777754
No 202
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=94.36 E-value=6.2 Score=41.69 Aligned_cols=143 Identities=13% Similarity=0.071 Sum_probs=75.7
Q ss_pred CCEEEEEeCCCEEEEEECcCC-ccceEEEcCCcceeeeeeeeeCCEEEEE-EccCCeEEEEeCCCCcE------------
Q 003791 53 RKRVVVSTEENVIASLDLRHG-EIFWRHVLGINDVVDGIDIALGKYVITL-SSDGSTLRAWNLPDGQM------------ 118 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG-~ivWR~~l~~~~~i~~l~~~~g~~~V~V-s~~g~~v~A~d~~tG~l------------ 118 (795)
.+.+++++ ++.+...|..++ +.+.+... +..+..+ ..+.+++. ++.++.|+.||..+|..
T Consensus 110 ~~~~~~~~-~~~i~i~d~~~~~~~~~~~~~--~~~~~~~---s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~ 183 (355)
T 3vu4_A 110 REFIVVSY-GDVISVFKFGNPWKRITDDIR--FGGVCEF---SNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKA 183 (355)
T ss_dssp SSEEEEEE-TTEEEEEESSTTCCBSSCCEE--EEEEEEE---ETTEEEEEESSCTTCEEEEECCC---------------
T ss_pred CCEEEEEE-cCEEEEEECCCCceeeEEecc--CCceEEE---EccEEEEeCCCcCcEEEEEECCCCCccccccccccccc
Confidence 44555554 567888898888 66665444 2111122 12444444 34568999999999872
Q ss_pred ----eEEEeccCccccCCceeccccccccCCCeEEE-Ee-CCE-EEEEECCCCcEEEEEecc-CcceeeeeEEEEecCCE
Q 003791 119 ----VWESFLRGSKHSKPLLLVPTNLKVDKDSLILV-SS-KGC-LHAVSSIDGEILWTRDFA-AESVEVQQVIQLDESDQ 190 (795)
Q Consensus 119 ----lWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V-~~-~g~-l~ald~~tG~~~W~~~~~-~~~~~~~~vv~s~~~~~ 190 (795)
+-......... ..+ ....++..++ .+ ++. +...|..+|+..-++... .... ...+..+..+..
T Consensus 184 ~~p~~~~~~~h~~~v----~~~----~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~-v~~~~~s~~~~~ 254 (355)
T 3vu4_A 184 ILGKGVLIKAHTNPI----KMV----RLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRAD-VVDMKWSTDGSK 254 (355)
T ss_dssp ---CCEEECCCSSCE----EEE----EECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSC-EEEEEECTTSCE
T ss_pred cCcccEEEEccCCce----EEE----EECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCc-EEEEEECCCCCE
Confidence 22222222211 111 1122444444 33 887 999999999998888732 1111 223322223334
Q ss_pred EEEEEecCCceeEEEEEEcCCCce
Q 003791 191 IYVVGYAGSSQFHAYQINAMNGEL 214 (795)
Q Consensus 191 Vyvv~~~g~~~~~v~ald~~tG~~ 214 (795)
+...+.++ .+...|..++..
T Consensus 255 l~s~s~d~----~v~iw~~~~~~~ 274 (355)
T 3vu4_A 255 LAVVSDKW----TLHVFEIFNDQD 274 (355)
T ss_dssp EEEEETTC----EEEEEESSCCSC
T ss_pred EEEEECCC----EEEEEEccCCCC
Confidence 44433344 677788877653
No 203
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=94.35 E-value=1.9 Score=44.13 Aligned_cols=138 Identities=14% Similarity=0.134 Sum_probs=76.9
Q ss_pred CCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCC-CCcE-eEEEeccCccccCCceecccc
Q 003791 62 ENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLP-DGQM-VWESFLRGSKHSKPLLLVPTN 139 (795)
Q Consensus 62 ~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~-tG~l-lWe~~~~~~~~s~~~~~~~~~ 139 (795)
.+.|+.+|+. |++. ..........++.....+..++....++.|+.||.. +|++ .=...+.. .. . .+..
T Consensus 152 ~~~l~~~~~~-g~~~--~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~-~~-~----~p~~ 222 (296)
T 3e5z_A 152 GRWVFRLAPD-GTLS--APIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTV-EP-G----KTDG 222 (296)
T ss_dssp SCEEEEECTT-SCEE--EEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECC-SS-S----CCCS
T ss_pred CcEEEEECCC-CCEE--EeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeC-CC-C----CCCe
Confidence 4578888876 6542 222211112233222234445334445789999987 7876 11111111 10 0 0111
Q ss_pred ccccCCCeEEEEeCCEEEEEECCCCcEEEEEeccCcceeeeeEEEE-ecCCEEEEEEecCCceeEEEEEEcCCCceeee
Q 003791 140 LKVDKDSLILVSSKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQL-DESDQIYVVGYAGSSQFHAYQINAMNGELLNH 217 (795)
Q Consensus 140 ~~~~~~~~V~V~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s-~~~~~Vyvv~~~g~~~~~v~ald~~tG~~~w~ 217 (795)
...+.++.++|..++.|.++|.. |+....+..+.. +..+... ..++.+|+.+ .+ .++.++++++++...
T Consensus 223 i~~d~~G~l~v~~~~~v~~~~~~-g~~~~~~~~~~~---~~~~~f~~~d~~~L~v~t-~~----~l~~~~~~~~~~~~~ 292 (296)
T 3e5z_A 223 LRVDAGGLIWASAGDGVHVLTPD-GDELGRVLTPQT---TSNLCFGGPEGRTLYMTV-ST----EFWSIETNVRGLEHH 292 (296)
T ss_dssp EEEBTTSCEEEEETTEEEEECTT-SCEEEEEECSSC---CCEEEEESTTSCEEEEEE-TT----EEEEEECSCCBCCC-
T ss_pred EEECCCCCEEEEcCCeEEEECCC-CCEEEEEECCCC---ceeEEEECCCCCEEEEEc-CC----eEEEEEccccccccc
Confidence 13444677888778999999986 888887776654 2334322 2344688754 33 589999998877643
No 204
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=94.26 E-value=5.3 Score=47.52 Aligned_cols=151 Identities=9% Similarity=0.063 Sum_probs=87.3
Q ss_pred CCEEEEEeCCCEEEEEECcCCccceEEEcC---C----cceeeeeeeeeCCEE-EEEEccCCeEEEEeCCCCcEeEEEec
Q 003791 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLG---I----NDVVDGIDIALGKYV-ITLSSDGSTLRAWNLPDGQMVWESFL 124 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~ivWR~~l~---~----~~~i~~l~~~~g~~~-V~Vs~~g~~v~A~d~~tG~llWe~~~ 124 (795)
++.|+++|..+-|..+|+++|+..+-..-. . ...+..+ ....++. +.+++.++.|..+|..+|+. +....
T Consensus 367 ~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i-~~d~~g~~lWigt~~~Gl~~~d~~~~~~-~~~~~ 444 (795)
T 4a2l_A 367 DKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAV-YVDEKKSLVYIGTHAGGLSILHRNSGQV-ENFNQ 444 (795)
T ss_dssp TSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEE-EEETTTTEEEEEETTTEEEEEETTTCCE-EEECT
T ss_pred CCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEE-EEcCCCCEEEEEeCcCceeEEeCCCCcE-EEeec
Confidence 567999999988999999988754322111 0 1123333 2234454 77777656799999999874 33332
Q ss_pred cCccccCCceeccccccccCCCeEEEEeCCEEEEEECCCCcEEEEEecc--Cc--ceeeeeEEEEecCCEEEEEEecCCc
Q 003791 125 RGSKHSKPLLLVPTNLKVDKDSLILVSSKGCLHAVSSIDGEILWTRDFA--AE--SVEVQQVIQLDESDQIYVVGYAGSS 200 (795)
Q Consensus 125 ~~~~~s~~~~~~~~~~~~~~~~~V~V~~~g~l~ald~~tG~~~W~~~~~--~~--~~~~~~vv~s~~~~~Vyvv~~~g~~ 200 (795)
..+.+... .+.. ...+.++.+.+...+.|+++|..+|+...-.... .+ ......+ .....+.+++.+. ++
T Consensus 445 ~~~~l~~~-~v~~--i~~d~~g~lwigt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i-~~d~~g~lWigt~-~G- 518 (795)
T 4a2l_A 445 RNSQLVNE-NVYA--ILPDGEGNLWLGTLSALVRFNPEQRSFTTIEKEKDGTPVVSKQITTL-FRDSHKRLWIGGE-EG- 518 (795)
T ss_dssp TTSCCSCS-CEEE--EEECSSSCEEEEESSCEEEEETTTTEEEECCBCTTCCBCCCCCEEEE-EECTTCCEEEEES-SC-
T ss_pred CCCCcCCC-eeEE--EEECCCCCEEEEecCceeEEeCCCCeEEEccccccccccCCceEEEE-EECCCCCEEEEeC-Cc-
Confidence 11111000 1111 1334467788876577999999988654322110 00 1112222 2346788998665 43
Q ss_pred eeEEEEEEcCCCce
Q 003791 201 QFHAYQINAMNGEL 214 (795)
Q Consensus 201 ~~~v~ald~~tG~~ 214 (795)
++.+|+.+++.
T Consensus 519 ---l~~~~~~~~~~ 529 (795)
T 4a2l_A 519 ---LSVFKQEGLDI 529 (795)
T ss_dssp ---EEEEEEETTEE
T ss_pred ---eEEEeCCCCeE
Confidence 88899888765
No 205
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=94.22 E-value=1.8 Score=46.36 Aligned_cols=152 Identities=13% Similarity=0.139 Sum_probs=88.4
Q ss_pred CCEEEEEe-CCCEEEEEECcCCccceEEEcCC----c--c-eeeeeeee--eCCEEEEE-Ec-------------cCCeE
Q 003791 53 RKRVVVST-EENVIASLDLRHGEIFWRHVLGI----N--D-VVDGIDIA--LGKYVITL-SS-------------DGSTL 108 (795)
Q Consensus 53 ~~~v~vat-~~g~l~ALn~~tG~ivWR~~l~~----~--~-~i~~l~~~--~g~~~V~V-s~-------------~g~~v 108 (795)
++++|+++ .++.|+++|+.+|.. ....++. . . ...++..- ..++.+++ +. ..+.|
T Consensus 24 ~g~~~vs~l~~g~V~~~~~~~~~~-~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v 102 (334)
T 2p9w_A 24 RQVFYQSNLYKGRIEVYNPKTQSH-FNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSF 102 (334)
T ss_dssp TTEEEEEETTTTEEEEECTTTCCE-EEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEE
T ss_pred CCEEEEEeccCCEEEEEcCCCCeE-EEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEE
Confidence 67899999 689999999976643 3444432 1 0 12355331 22344433 32 14679
Q ss_pred EEEeCC---CCcEeEEEeccCcccc-----CCceeccccccccCCCeEEEE--eC-CEEEEEECCCCc--EEEEEeccCc
Q 003791 109 RAWNLP---DGQMVWESFLRGSKHS-----KPLLLVPTNLKVDKDSLILVS--SK-GCLHAVSSIDGE--ILWTRDFAAE 175 (795)
Q Consensus 109 ~A~d~~---tG~llWe~~~~~~~~s-----~~~~~~~~~~~~~~~~~V~V~--~~-g~l~ald~~tG~--~~W~~~~~~~ 175 (795)
..+|+. ||+++|...+....-. ........+.+++.++.+||. .. +.++++++. |+ ..|-...+..
T Consensus 103 ~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd-G~~~~~~~~~~~~~ 181 (334)
T 2p9w_A 103 HSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD-GKTVSTFAWESGNG 181 (334)
T ss_dssp EEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT-SCCEEEEEECCCCS
T ss_pred EEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC-CCEEeeeeecCCCc
Confidence 999999 9999999998632100 000011112356667889995 37 999999965 54 3476544321
Q ss_pred ce--eeeeEEEEecCCEEEEEEecCCceeEEEEEEcC
Q 003791 176 SV--EVQQVIQLDESDQIYVVGYAGSSQFHAYQINAM 210 (795)
Q Consensus 176 ~~--~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~ 210 (795)
.. -+..++....+..+++... ++ +++++|+.
T Consensus 182 ~~~~G~nGIv~~pdg~~Liv~~~-~g---~L~~fD~~ 214 (334)
T 2p9w_A 182 GQRPGYSGITFDPHSNKLIAFGG-PR---ALTAFDVS 214 (334)
T ss_dssp SSCCSCSEEEEETTTTEEEEESS-SS---SEEEEECS
T ss_pred ccccCcceEEEeCCCCEEEEEcC-CC---eEEEEcCC
Confidence 11 1223443334555665433 43 79999987
No 206
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=94.19 E-value=6.4 Score=41.19 Aligned_cols=197 Identities=15% Similarity=0.153 Sum_probs=92.6
Q ss_pred cCCCEEEEEeCC----CEE--EEEECcCCccceEEEcCCc-ceeeeeeeeeCCEEEEEEc-cCCeEEEEeCCCCcEeEEE
Q 003791 51 TGRKRVVVSTEE----NVI--ASLDLRHGEIFWRHVLGIN-DVVDGIDIALGKYVITLSS-DGSTLRAWNLPDGQMVWES 122 (795)
Q Consensus 51 ~~~~~v~vat~~----g~l--~ALn~~tG~ivWR~~l~~~-~~i~~l~~~~g~~~V~Vs~-~g~~v~A~d~~tG~llWe~ 122 (795)
++++.||+++++ +.+ +.+|.++|++.-....... .....+. .++..+++++ .++.+..|+..++..+.+.
T Consensus 59 pdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~--~dg~~l~~~~~~~~~v~~~~~~~~g~~~~~ 136 (361)
T 3scy_A 59 ADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLT--TNGKNIVTANYSGGSITVFPIGQDGALLPA 136 (361)
T ss_dssp TTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEE--ECSSEEEEEETTTTEEEEEEBCTTSCBCSC
T ss_pred CCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEE--ECCCEEEEEECCCCEEEEEEeCCCCcCccc
Confidence 346679999885 565 5677777875433333211 1122332 2445555554 4678999998754332111
Q ss_pred ----eccCccc------cCCceeccccccccCCC-eEEEEe--CCEEEEEECC--CC----c-EE-----EEEeccCcce
Q 003791 123 ----FLRGSKH------SKPLLLVPTNLKVDKDS-LILVSS--KGCLHAVSSI--DG----E-IL-----WTRDFAAESV 177 (795)
Q Consensus 123 ----~~~~~~~------s~~~~~~~~~~~~~~~~-~V~V~~--~g~l~ald~~--tG----~-~~-----W~~~~~~~~~ 177 (795)
...+... ...+..+ ....++ .+++.. ++.+..++.. +| + .. -....+...
T Consensus 137 ~~~~~~~g~~~~~~~~~~~~~~~~----~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~- 211 (361)
T 3scy_A 137 SDVIEFKGSGPDKERQTMPHLHCV----RITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGS- 211 (361)
T ss_dssp SEEEECCCCCSCTTTCSSCCEEEE----EECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTC-
T ss_pred ceeEEccCCCCCccccCCCcceEE----EECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCC-
Confidence 1111000 0000001 112233 455543 5566555433 43 2 11 122222221
Q ss_pred eeeeEEEEecCCEEEEEEecCCceeEEEEEEcCCCceeeeeeeec-cCCccc--ceEEe-cCcEEEEEECC-CCeEEEEE
Q 003791 178 EVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHETAAF-SGGFVG--DVALV-SSDTLVTLDTT-RSILVTVS 252 (795)
Q Consensus 178 ~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~tG~~~w~~~v~~-~~~~~~--~~~~v-g~~~lv~~d~~-~~~L~v~~ 252 (795)
.+..+..+.++..+|+.+..++ .+..+|..+|+......+.. +....+ .+.+- .+..+++.+.. .+.+.+.+
T Consensus 212 ~~~~~~~spdg~~l~v~~~~~~---~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~ 288 (361)
T 3scy_A 212 GPRHLIFNSDGKFAYLINEIGG---TVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFK 288 (361)
T ss_dssp CEEEEEECTTSSEEEEEETTTC---EEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEE
T ss_pred CCeEEEEcCCCCEEEEEcCCCC---eEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEE
Confidence 1334433334456787653333 57777777887654433322 221121 12222 34466666655 57788877
Q ss_pred ee--cCe
Q 003791 253 FK--NRK 257 (795)
Q Consensus 253 l~--sg~ 257 (795)
+. +|+
T Consensus 289 ~~~~~g~ 295 (361)
T 3scy_A 289 VDETNGT 295 (361)
T ss_dssp ECTTTCC
T ss_pred EcCCCCc
Confidence 74 444
No 207
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=93.90 E-value=3.7 Score=44.66 Aligned_cols=175 Identities=11% Similarity=0.013 Sum_probs=84.4
Q ss_pred CcCCccceEEEcCCcceeeeeeeeeC-CEEEEEEccCCeEEEEeCCC----------CcEeEEEeccCccccCCceeccc
Q 003791 70 LRHGEIFWRHVLGINDVVDGIDIALG-KYVITLSSDGSTLRAWNLPD----------GQMVWESFLRGSKHSKPLLLVPT 138 (795)
Q Consensus 70 ~~tG~ivWR~~l~~~~~i~~l~~~~g-~~~V~Vs~~g~~v~A~d~~t----------G~llWe~~~~~~~~s~~~~~~~~ 138 (795)
.++|++.=.+.+...+.+..+..... ..+++.++.++.|+.||..+ +..+.......... ..+.+.+
T Consensus 114 ~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v-~~l~~~~- 191 (430)
T 2xyi_A 114 SVCGKIEIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEG-YGLSWNP- 191 (430)
T ss_dssp ----CEEEEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCC-CCEEECT-
T ss_pred CCCCceEEEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCe-EEEEeCC-
Confidence 34444443333433333444422222 34566566677999999987 67777666554332 2222222
Q ss_pred cccccCCCeEEEE-eCCEEEEEECCCCcE-EEEEe----ccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcCCC
Q 003791 139 NLKVDKDSLILVS-SKGCLHAVSSIDGEI-LWTRD----FAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNG 212 (795)
Q Consensus 139 ~~~~~~~~~V~V~-~~g~l~ald~~tG~~-~W~~~----~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~tG 212 (795)
...+.++.. .+|.+...|..++.. .+... ..........+.....++.+++.+...+ .+..+|..++
T Consensus 192 ----~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg---~i~i~d~~~~ 264 (430)
T 2xyi_A 192 ----NLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQ---KLMIWDTRNN 264 (430)
T ss_dssp ----TSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTS---EEEEEETTCS
T ss_pred ----CCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCC---eEEEEECCCC
Confidence 212244444 388999999887532 11111 0011111222222222455555554433 7888999888
Q ss_pred c---eeeeeeeeccCCcccceEEe--cCcEEEEEECCCCeEEEEEeecC
Q 003791 213 E---LLNHETAAFSGGFVGDVALV--SSDTLVTLDTTRSILVTVSFKNR 256 (795)
Q Consensus 213 ~---~~w~~~v~~~~~~~~~~~~v--g~~~lv~~d~~~~~L~v~~l~sg 256 (795)
. .+.... .....+.. +.+- +..++++.. ..|.+.+.++.+.
T Consensus 265 ~~~~~~~~~~-~~~~~v~~-i~~~p~~~~~l~tg~-~dg~v~vwd~~~~ 310 (430)
T 2xyi_A 265 NTSKPSHTVD-AHTAEVNC-LSFNPYSEFILATGS-ADKTVALWDLRNL 310 (430)
T ss_dssp CSSSCSEEEE-CCSSCEEE-EEECSSCTTEEEEEE-TTSEEEEEETTCT
T ss_pred CCCcceeEee-cCCCCeEE-EEeCCCCCCEEEEEe-CCCeEEEEeCCCC
Confidence 3 444332 11112211 1111 223555554 4588989888773
No 208
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=93.87 E-value=7.7 Score=41.81 Aligned_cols=156 Identities=12% Similarity=0.069 Sum_probs=77.6
Q ss_pred CCEEEEEeC---CCEEEEEEC-cCCccceEEEcCCcc-eeeeeeeeeCCEEEEE-EccCCeEEEEeCCCCcEeEEEeccC
Q 003791 53 RKRVVVSTE---ENVIASLDL-RHGEIFWRHVLGIND-VVDGIDIALGKYVITL-SSDGSTLRAWNLPDGQMVWESFLRG 126 (795)
Q Consensus 53 ~~~v~vat~---~g~l~ALn~-~tG~ivWR~~l~~~~-~i~~l~~~~g~~~V~V-s~~g~~v~A~d~~tG~llWe~~~~~ 126 (795)
.++++..+. ++.|..++. .+|+.+=.+.+-.+. .+-.+.++.|++-.++ ++.+++|+.||+.+|+.+-......
T Consensus 144 ~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~ 223 (356)
T 2w18_A 144 KRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDD 223 (356)
T ss_dssp TTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC
T ss_pred CCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCC
Confidence 344444433 666666666 456654444443331 1222222334444444 4567899999999999998886432
Q ss_pred ccccCCceeccccccccCCCeEEE-------------E-eCCEEEEEECCCCcEEEEEec--cCcceeeeeEEEEecCCE
Q 003791 127 SKHSKPLLLVPTNLKVDKDSLILV-------------S-SKGCLHAVSSIDGEILWTRDF--AAESVEVQQVIQLDESDQ 190 (795)
Q Consensus 127 ~~~s~~~~~~~~~~~~~~~~~V~V-------------~-~~g~l~ald~~tG~~~W~~~~--~~~~~~~~~vv~s~~~~~ 190 (795)
... .....+. ...++..++ . .++++...|..+|+..-.... +.+.... .+-.... +.
T Consensus 224 ~~v-~~v~~va----fSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~-~lsg~~s-g~ 296 (356)
T 2w18_A 224 SYQ-ASVCHKA----YSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGR-FLEGDVK-DH 296 (356)
T ss_dssp ----CCCEEEE----EEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCC-EEEEEEE-TT
T ss_pred cce-eeeEEEE----ECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcce-eEccccC-CC
Confidence 111 0110000 011233321 1 267888889999887644321 2111100 0100111 22
Q ss_pred EEEEE-ecCCceeEEEEEEcCCCceeeeee
Q 003791 191 IYVVG-YAGSSQFHAYQINAMNGELLNHET 219 (795)
Q Consensus 191 Vyvv~-~~g~~~~~v~ald~~tG~~~w~~~ 219 (795)
..+.+ .++ .+...|+.+|+.+.+.+
T Consensus 297 ~lASgS~Dg----TIkIWDl~tGk~l~tL~ 322 (356)
T 2w18_A 297 CAAAILTSG----TIAIWDLLLGQCTALLP 322 (356)
T ss_dssp EEEEEETTS----CEEEEETTTCSEEEEEC
T ss_pred EEEEEcCCC----cEEEEECCCCcEEEEec
Confidence 33333 333 57788999999887653
No 209
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=93.87 E-value=14 Score=43.81 Aligned_cols=152 Identities=9% Similarity=0.079 Sum_probs=86.7
Q ss_pred CCEEEEEeCCCEEEEEECcCCccceEEEc-----CCc---ceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEec
Q 003791 53 RKRVVVSTEENVIASLDLRHGEIFWRHVL-----GIN---DVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFL 124 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~ivWR~~l-----~~~---~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~ 124 (795)
++.|+++|..+-|..++++++...+-... ... ..+..+ ....++.+.+++.++.|..+|..++...+-.
T Consensus 323 ~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i-~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~-- 399 (781)
T 3v9f_A 323 FNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSV-CDDGQGKLWIGTDGGGINVFENGKRVAIYNK-- 399 (781)
T ss_dssp SCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEE-EECTTSCEEEEEBSSCEEEEETTEEEEECC---
T ss_pred CCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEE-EEcCCCCEEEEeCCCcEEEEECCCCeEEEcc--
Confidence 56799999888899999988765442211 111 123333 2344567777775556999999877654321
Q ss_pred cCccccCCceeccccccccCCCeEEEEe-CCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeE
Q 003791 125 RGSKHSKPLLLVPTNLKVDKDSLILVSS-KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFH 203 (795)
Q Consensus 125 ~~~~~s~~~~~~~~~~~~~~~~~V~V~~-~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~ 203 (795)
....+... .+.. ...+.++.+.+.. ++.|.++|..+|+...-.....+......+. ....+.+++.+. + -
T Consensus 400 ~~~~~~~~-~v~~--i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~-~d~~g~lwigt~-~----G 470 (781)
T 3v9f_A 400 ENRELLSN-SVLC--SLKDSEGNLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFY-EDKNKKIWIGTH-A----G 470 (781)
T ss_dssp ----CCCS-BEEE--EEECTTSCEEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEE-ECTTSEEEEEET-T----E
T ss_pred CCCCCCCc-ceEE--EEECCCCCEEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEE-ECCCCCEEEEEC-C----c
Confidence 11111001 1111 1334467788876 5789999999987543321111111122222 235788888665 3 4
Q ss_pred EEEEEcCCCceee
Q 003791 204 AYQINAMNGELLN 216 (795)
Q Consensus 204 v~ald~~tG~~~w 216 (795)
+..+|+.+|+...
T Consensus 471 l~~~~~~~~~~~~ 483 (781)
T 3v9f_A 471 VFVIDLASKKVIH 483 (781)
T ss_dssp EEEEESSSSSCCE
T ss_pred eEEEeCCCCeEEe
Confidence 8899999887643
No 210
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=93.65 E-value=7.6 Score=40.23 Aligned_cols=194 Identities=8% Similarity=0.046 Sum_probs=103.4
Q ss_pred CCCEEEEEeCC-----C-------EEEEEECcCCccceEEEcCCcceeee-eeeeeCCEEEEEEccC-------CeEEEE
Q 003791 52 GRKRVVVSTEE-----N-------VIASLDLRHGEIFWRHVLGINDVVDG-IDIALGKYVITLSSDG-------STLRAW 111 (795)
Q Consensus 52 ~~~~v~vat~~-----g-------~l~ALn~~tG~ivWR~~l~~~~~i~~-l~~~~g~~~V~Vs~~g-------~~v~A~ 111 (795)
.++.||+.... + .+..+|+.++ .|+..-+.+..-.. .....++.+++++|.. ..+..+
T Consensus 55 ~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~--~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~y 132 (318)
T 2woz_A 55 QQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSS--EWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCY 132 (318)
T ss_dssp SSSCEEEEESSCC-------CCCBEEEEEETTTT--EEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEE
T ss_pred ECCEEEEECCcccCccccCCCccccEEEEeCCCC--cEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEE
Confidence 36677776551 1 2889999877 59875433321111 1123566666666632 358889
Q ss_pred eCCCCcEeEEEeccCccccCCceeccccccccCCCeEEEEe--------CCEEEEEECCCCcEEEEEeccCcce-eeeeE
Q 003791 112 NLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSS--------KGCLHAVSSIDGEILWTRDFAAESV-EVQQV 182 (795)
Q Consensus 112 d~~tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~~--------~g~l~ald~~tG~~~W~~~~~~~~~-~~~~v 182 (795)
|..++ .|+....-+.. ..... ....++.+++.+ -..+..+|..++ .|+.-.+.+.- ....+
T Consensus 133 d~~~~--~W~~~~~~p~~-----r~~~~-~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~ 202 (318)
T 2woz_A 133 DPVAA--KWSEVKNLPIK-----VYGHN-VISHNGMIYCLGGKTDDKKCTNRVFIYNPKKG--DWKDLAPMKTPRSMFGV 202 (318)
T ss_dssp ETTTT--EEEEECCCSSC-----EESCE-EEEETTEEEEECCEESSSCBCCCEEEEETTTT--EEEEECCCSSCCBSCEE
T ss_pred eCCCC--CEeECCCCCCc-----ccccE-EEEECCEEEEEcCCCCCCCccceEEEEcCCCC--EEEECCCCCCCcccceE
Confidence 98876 58765322211 11111 111256677753 135899999886 48765433221 01112
Q ss_pred EEEecCCEEEEEEecCCc--eeEEEEEEcCCCceeeeeeeeccCCccc-ceEEecCcEEEEEEC-------------CCC
Q 003791 183 IQLDESDQIYVVGYAGSS--QFHAYQINAMNGELLNHETAAFSGGFVG-DVALVSSDTLVTLDT-------------TRS 246 (795)
Q Consensus 183 v~s~~~~~Vyvv~~~g~~--~~~v~ald~~tG~~~w~~~v~~~~~~~~-~~~~vg~~~lv~~d~-------------~~~ 246 (795)
...++.+|++|-..+. .-.+..+|+.+++ |+..-..|..... .++..++.+++..-. ...
T Consensus 203 --~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~ 278 (318)
T 2woz_A 203 --AIHKGKIVIAGGVTEDGLSASVEAFDLKTNK--WEVMTEFPQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVN 278 (318)
T ss_dssp --EEETTEEEEEEEEETTEEEEEEEEEETTTCC--EEECCCCSSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCC
T ss_pred --EEECCEEEEEcCcCCCCccceEEEEECCCCe--EEECCCCCCcccceEEEEECCEEEEECCeeccCCCCceeccceee
Confidence 2357889988743221 2357889998874 7764444443333 333335444443211 123
Q ss_pred eEEEEEeecCeeeeEEE
Q 003791 247 ILVTVSFKNRKIAFQET 263 (795)
Q Consensus 247 ~L~v~~l~sg~~~~~~~ 263 (795)
.+++.|+++++ ...+
T Consensus 279 ~v~~yd~~~~~--W~~~ 293 (318)
T 2woz_A 279 DIWKYEDDKKE--WAGM 293 (318)
T ss_dssp CEEEEETTTTE--EEEE
T ss_pred eEEEEeCCCCE--ehhh
Confidence 56777777765 4444
No 211
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=93.60 E-value=2.7 Score=49.77 Aligned_cols=198 Identities=7% Similarity=-0.057 Sum_probs=98.3
Q ss_pred CCEEEEEeCCCEEEEEECcCCccceEEEcC-CcceeeeeeeeeC--CEEEEEEccCCeEEEEeCCCCcEe--EEEeccCc
Q 003791 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLG-INDVVDGIDIALG--KYVITLSSDGSTLRAWNLPDGQMV--WESFLRGS 127 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~ivWR~~l~-~~~~i~~l~~~~g--~~~V~Vs~~g~~v~A~d~~tG~ll--We~~~~~~ 127 (795)
++.+++++.+|.|...|.++|+..=...+. ....+..+..... +..++.++.++.|+.||..++... ........
T Consensus 67 ~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~ 146 (753)
T 3jro_A 67 GTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAI 146 (753)
T ss_dssp CSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSS
T ss_pred CCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCC
Confidence 567999999999999999998622122222 1223443322222 445555666789999999988432 22222211
Q ss_pred cccCCceecccc--------ccccCCCeEEEE-eCCEEEEEECCCCcEEEEEec--cCcceeeeeEEEEecC--CEEEEE
Q 003791 128 KHSKPLLLVPTN--------LKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDF--AAESVEVQQVIQLDES--DQIYVV 194 (795)
Q Consensus 128 ~~s~~~~~~~~~--------~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~--~~~~~~~~~vv~s~~~--~~Vyvv 194 (795)
.. ..+...+.. ...+ +..+++. .+|.++..|..+|...|.... .........+..+..+ +..++.
T Consensus 147 ~v-~~l~~~p~~~~~~~~~~~~~d-~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s 224 (753)
T 3jro_A 147 GV-NSASWAPATIEEDGEHNGTKE-SRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLAS 224 (753)
T ss_dssp CE-EEEEECCCC---------CGG-GCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEE
T ss_pred ce-EEEEecCcccccccccccCCC-CCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEE
Confidence 11 111111100 0001 2334444 488899998888865544322 1111112223222231 344443
Q ss_pred EecCCceeEEEEEEcCCCceeeeeeeeccCCccc---ceEEe-cCcEEEEEECCCCeEEEEEeecC
Q 003791 195 GYAGSSQFHAYQINAMNGELLNHETAAFSGGFVG---DVALV-SSDTLVTLDTTRSILVTVSFKNR 256 (795)
Q Consensus 195 ~~~g~~~~~v~ald~~tG~~~w~~~v~~~~~~~~---~~~~v-g~~~lv~~d~~~~~L~v~~l~sg 256 (795)
+...+ .+..+|..+|+..+...........+ .+.+- .+..+++.. ..|.+++-++.++
T Consensus 225 ~s~Dg---~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s-~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 225 VSQDR---TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSG-GDNKVTLWKENLE 286 (753)
T ss_dssp EESSS---CEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEEC-SSSCEECCBCCSS
T ss_pred EecCC---EEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEc-CCCEEEEEecCCC
Confidence 43322 57778888886544333222111111 12222 334555544 4577888887754
No 212
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=93.57 E-value=2.8 Score=51.06 Aligned_cols=155 Identities=12% Similarity=0.096 Sum_probs=88.7
Q ss_pred CCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEecc-------
Q 003791 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLR------- 125 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~------- 125 (795)
+..++.++.++.|.-.|.++|+.+-...... .+..+...-.+..+++++.++.|+.||..+|++. .+...
T Consensus 69 g~~L~S~s~D~~v~lWd~~~~~~~~~~~~~~--~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~-~~~i~~~~~~~~ 145 (902)
T 2oaj_A 69 GIYLVVINAKDTVYVLSLYSQKVLTTVFVPG--KITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLS-SFKLDNLQKSSF 145 (902)
T ss_dssp TTEEEEEETTCEEEEEETTTCSEEEEEECSS--CEEEEECCTTCSEEEEEETTSCEEEEETTTTEEE-EEEECCHHHHHT
T ss_pred CCEEEEEECcCeEEEEECCCCcEEEEEcCCC--CEEEEEECCCCCEEEEEcCCCcEEEEECCCCccc-cceecccccccc
Confidence 4469999999999999999999887775432 3444433334456666666789999999999874 22210
Q ss_pred C-ccccCCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEeccCc----------------ceeeeeEEEEec
Q 003791 126 G-SKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAE----------------SVEVQQVIQLDE 187 (795)
Q Consensus 126 ~-~~~s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~~----------------~~~~~~vv~s~~ 187 (795)
. .........+.. ..+..+.+++. .+|.+ ..|..+|+..-.+....+ ......+..+..
T Consensus 146 ~~~~h~~~V~sl~~--sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspd 222 (902)
T 2oaj_A 146 FPAARLSPIVSIQW--NPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPN 222 (902)
T ss_dssp CSSSCCCCCCEEEE--ETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTT
T ss_pred ccccCCCCeEEEEE--ccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCC
Confidence 0 000001111100 11111234444 48888 889999987766643200 011222322223
Q ss_pred CCEEEEEEecCCceeEEEEEEcCCCceeee
Q 003791 188 SDQIYVVGYAGSSQFHAYQINAMNGELLNH 217 (795)
Q Consensus 188 ~~~Vyvv~~~g~~~~~v~ald~~tG~~~w~ 217 (795)
+..++.+...+ .+...|..+|+.+..
T Consensus 223 -g~~lasgs~Dg---~i~lWd~~~g~~~~~ 248 (902)
T 2oaj_A 223 -SLHIITIHEDN---SLVFWDANSGHMIMA 248 (902)
T ss_dssp -SSEEEEEETTC---CEEEEETTTCCEEEE
T ss_pred -CCEEEEEECCC---eEEEEECCCCcEEEE
Confidence 34444343332 688899999998754
No 213
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=93.52 E-value=3 Score=48.83 Aligned_cols=194 Identities=13% Similarity=-0.000 Sum_probs=93.3
Q ss_pred cCCCEEEEEeC-CC----EEEEEECcCCccceEEEcCCcceeeeeee-eeCCEEEEEEccC---------------CeEE
Q 003791 51 TGRKRVVVSTE-EN----VIASLDLRHGEIFWRHVLGINDVVDGIDI-ALGKYVITLSSDG---------------STLR 109 (795)
Q Consensus 51 ~~~~~v~vat~-~g----~l~ALn~~tG~ivWR~~l~~~~~i~~l~~-~~g~~~V~Vs~~g---------------~~v~ 109 (795)
++++.|.++++ .| .|.-+|.++|+.+=. .+... .+..+.- ..++.+++.+..+ ..|+
T Consensus 134 PDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~-~~~~~-~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~ 211 (710)
T 2xdw_A 134 EDGEYFAYGLSASGSDWVTIKFMKVDGAKELPD-VLERV-KFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLY 211 (710)
T ss_dssp TTSSEEEEEEEETTCSCEEEEEEETTTTEEEEE-EEEEE-CSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEE
T ss_pred CCCCEEEEEEcCCCCceEEEEEEECCCCCCCcc-cccCc-ccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEE
Confidence 44555554443 33 899999999986421 11111 1112211 2455566654432 2389
Q ss_pred EEeCCCCc----EeEEEeccCccccCCceeccccccccCCCeEEEE-e-----CCEEEEEECCC------CcEEEEEecc
Q 003791 110 AWNLPDGQ----MVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-S-----KGCLHAVSSID------GEILWTRDFA 173 (795)
Q Consensus 110 A~d~~tG~----llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~-~-----~g~l~ald~~t------G~~~W~~~~~ 173 (795)
.|+..+|. ++++........ ....+ ..+ ++.+++. . +..++.+|..+ |...|+.-..
T Consensus 212 ~~~l~t~~~~~~~v~~~~~~~~~~-~~~~~-----SpD-g~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~ 284 (710)
T 2xdw_A 212 YHVLGTDQSEDILCAEFPDEPKWM-GGAEL-----SDD-GRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLID 284 (710)
T ss_dssp EEETTSCGGGCEEEECCTTCTTCE-EEEEE-----CTT-SCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEEC
T ss_pred EEECCCCcccceEEeccCCCCeEE-EEEEE-----cCC-CCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeC
Confidence 99998886 333321111000 01111 122 2344443 2 45788888877 6433322111
Q ss_pred CcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcCCCce-eeeeeeeccC--CcccceEEecCc-EEEEEECCCC--e
Q 003791 174 AESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGEL-LNHETAAFSG--GFVGDVALVSSD-TLVTLDTTRS--I 247 (795)
Q Consensus 174 ~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~tG~~-~w~~~v~~~~--~~~~~~~~vg~~-~lv~~d~~~~--~ 247 (795)
...... ..+ +..++.+|+.+..++...+++.+|+.+|+. .|+.-+.... .+. .+.+..++ ++++.. ..+ .
T Consensus 285 ~~~~~~-~~~-s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~lv~~~~-~~g~~~ 360 (710)
T 2xdw_A 285 NFEGEY-DYV-TNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLE-WVACVRSNFLVLCYL-HDVKNT 360 (710)
T ss_dssp SSSSCE-EEE-EEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEE-EEEEETTTEEEEEEE-ETTEEE
T ss_pred CCCcEE-EEE-eccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEE-EEEEEcCCEEEEEEE-ECCEEE
Confidence 111111 122 346778888776554456899999998864 3544322211 121 23333233 333332 233 4
Q ss_pred EEEEEeecCe
Q 003791 248 LVTVSFKNRK 257 (795)
Q Consensus 248 L~v~~l~sg~ 257 (795)
|++.++.+|+
T Consensus 361 l~~~~~~~g~ 370 (710)
T 2xdw_A 361 LQLHDLATGA 370 (710)
T ss_dssp EEEEETTTCC
T ss_pred EEEEECCCCC
Confidence 6777775665
No 214
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=93.52 E-value=7.4 Score=45.29 Aligned_cols=156 Identities=10% Similarity=0.125 Sum_probs=82.5
Q ss_pred cCCCEEEEEeCCCEEEEEECcCC---ccceEEEcCCcceeeeeeee-eCCEEEEEEccCCeEEEEeCCCCcEeEEEeccC
Q 003791 51 TGRKRVVVSTEENVIASLDLRHG---EIFWRHVLGINDVVDGIDIA-LGKYVITLSSDGSTLRAWNLPDGQMVWESFLRG 126 (795)
Q Consensus 51 ~~~~~v~vat~~g~l~ALn~~tG---~ivWR~~l~~~~~i~~l~~~-~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~ 126 (795)
++++.|++++. +.|..+|..+| ++. +.......+...... .|+.+++++ + +.|+.||..+|+..--.....
T Consensus 118 pDg~~l~~~~~-~~i~~~d~~~~~~~~~~--~l~~~~~~~~~~~~SPDG~~la~~~-~-~~i~~~d~~~g~~~~~~~~~~ 192 (741)
T 2ecf_A 118 PDAQRLLFPLG-GELYLYDLKQEGKAAVR--QLTHGEGFATDAKLSPKGGFVSFIR-G-RNLWVIDLASGRQMQLTADGS 192 (741)
T ss_dssp TTSSEEEEEET-TEEEEEESSSCSTTSCC--BCCCSSSCEEEEEECTTSSEEEEEE-T-TEEEEEETTTTEEEECCCCCC
T ss_pred CCCCEEEEEeC-CcEEEEECCCCCcceEE--EcccCCcccccccCCCCCCEEEEEe-C-CcEEEEecCCCCEEEeccCCc
Confidence 34556777776 99999999998 442 112211222222222 455555644 3 489999999997653222111
Q ss_pred ccc---------------cCCceeccccccccCCCeEEEE-eCC---------------------------------EEE
Q 003791 127 SKH---------------SKPLLLVPTNLKVDKDSLILVS-SKG---------------------------------CLH 157 (795)
Q Consensus 127 ~~~---------------s~~~~~~~~~~~~~~~~~V~V~-~~g---------------------------------~l~ 157 (795)
... ...+.+- .+ ++.+++. .++ .|+
T Consensus 193 ~~~~~g~~~~v~~~~~~~~~~~~~S-----pD-g~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~ 266 (741)
T 2ecf_A 193 TTIGNGIAEFVADEEMDRHTGYWWA-----PD-DSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLG 266 (741)
T ss_dssp SSEEESCCCHHHHHHSCCCCSEEEC-----TT-SSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEE
T ss_pred cceeccccceeeeeccccccceEEC-----CC-CCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEE
Confidence 100 0111121 22 2333333 333 777
Q ss_pred EEECCC-CcEEEEEeccCcceeeeeEEEEecCCEEEEEEec-CCceeEEEEEEcCCCceeeee
Q 003791 158 AVSSID-GEILWTRDFAAESVEVQQVIQLDESDQIYVVGYA-GSSQFHAYQINAMNGELLNHE 218 (795)
Q Consensus 158 ald~~t-G~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~-g~~~~~v~ald~~tG~~~w~~ 218 (795)
.+|..+ |+................+.. .++..+++.+.. ++....+..+|+.+|+.....
T Consensus 267 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~ 328 (741)
T 2ecf_A 267 VISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLA 328 (741)
T ss_dssp EECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEE
T ss_pred EEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEE
Confidence 888888 876554322111111233333 456666665543 334568999999999876444
No 215
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=93.39 E-value=0.59 Score=50.56 Aligned_cols=154 Identities=8% Similarity=-0.007 Sum_probs=83.6
Q ss_pred CCEEEEEeCCCEEEEEECcCCccceEEE------cCC-cceeeeeeeeeCC-EEEEEEccCCeEEEEeCCCCcE----eE
Q 003791 53 RKRVVVSTEENVIASLDLRHGEIFWRHV------LGI-NDVVDGIDIALGK-YVITLSSDGSTLRAWNLPDGQM----VW 120 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~ivWR~~------l~~-~~~i~~l~~~~g~-~~V~Vs~~g~~v~A~d~~tG~l----lW 120 (795)
++.++++ .++.|.-.|.+++...++.. +.. ...+..+.....+ ..++.++.++.|+.||..+|+. ..
T Consensus 189 ~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 267 (447)
T 3dw8_B 189 YETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSK 267 (447)
T ss_dssp SSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCE
T ss_pred CCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceee
Confidence 4455555 89999999999766666642 211 1223333222222 4555566677999999999997 55
Q ss_pred EEeccCcccc--------CCceeccccccccCCC-eEEEEeCCEEEEEECCC-CcEEEEEeccCccee------------
Q 003791 121 ESFLRGSKHS--------KPLLLVPTNLKVDKDS-LILVSSKGCLHAVSSID-GEILWTRDFAAESVE------------ 178 (795)
Q Consensus 121 e~~~~~~~~s--------~~~~~~~~~~~~~~~~-~V~V~~~g~l~ald~~t-G~~~W~~~~~~~~~~------------ 178 (795)
.......... .....+ ....++ .++..+++.+...|..+ |++.-++........
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~v~~~----~~s~~g~~l~~~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~ 343 (447)
T 3dw8_B 268 LFEEPEDPSNRSFFSEIISSISDV----KFSHSGRYMMTRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIF 343 (447)
T ss_dssp EECCC-----CCHHHHHTTCEEEE----EECTTSSEEEEEESSEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGG
T ss_pred EeccCCCccccccccccCceEEEE----EECCCCCEEEEeeCCeEEEEeCCCCccccceeeccccccccccccccccccc
Confidence 5554432000 001111 111133 44444568999999887 776655544321100
Q ss_pred -eeeEEEEecCCEEEEEEecCCceeEEEEEEcCCCcee
Q 003791 179 -VQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELL 215 (795)
Q Consensus 179 -~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~tG~~~ 215 (795)
..++..+..+..++..+.+| .+..+|..+|+.+
T Consensus 344 ~~~~~~~s~~~~~l~s~s~dg----~v~iwd~~~~~~~ 377 (447)
T 3dw8_B 344 DKFECCWNGSDSVVMTGSYNN----FFRMFDRNTKRDI 377 (447)
T ss_dssp CCCCEEECTTSSEEEEECSTT----EEEEEETTTCCEE
T ss_pred cceEEEECCCCCEEEEeccCC----EEEEEEcCCCcce
Confidence 01122223344454433344 7888999999876
No 216
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=93.32 E-value=8.3 Score=42.45 Aligned_cols=150 Identities=8% Similarity=-0.003 Sum_probs=76.3
Q ss_pred CCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEcc-C----CeEEEEeCCCCcEeEEEeccCc
Q 003791 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSD-G----STLRAWNLPDGQMVWESFLRGS 127 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~-g----~~v~A~d~~tG~llWe~~~~~~ 127 (795)
++.||++...+.|..+|++++.+. ..........++.+...++.++++.. + ..+..++. +|...+...+...
T Consensus 149 ~g~Lyv~d~~~~I~~id~~~~~v~--~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~~~~~~l~~~ 225 (430)
T 3tc9_A 149 HNHLYLVGEQHPTRLIDFEKEYVS--TVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGFKVITELTKG 225 (430)
T ss_dssp EEEEEEEEBTEEEEEEETTTTEEE--EEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTSCSEEEEEEC
T ss_pred CCeEEEEeCCCcEEEEECCCCEEE--EEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCceeeeeeeccC
Confidence 467999988888999999877642 22222211223322234455666643 1 13444554 4554433322211
Q ss_pred cccCCceeccccccccC-CCeEEEE--eCCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEE
Q 003791 128 KHSKPLLLVPTNLKVDK-DSLILVS--SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHA 204 (795)
Q Consensus 128 ~~s~~~~~~~~~~~~~~-~~~V~V~--~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v 204 (795)
..... + ..+. ++.+++. .+++|++++..++...-....+.... |..+.....++.+|+..... ..+..
T Consensus 226 ~~p~g--i-----avdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~-P~gia~~pdG~~lyv~d~~~-~~I~~ 296 (430)
T 3tc9_A 226 QNCNG--A-----ETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGW-EFHIQFHPSGNYAYIVVVNQ-HYILR 296 (430)
T ss_dssp SSCCC--E-----EECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSC-CEEEEECTTSSEEEEEETTT-TEEEE
T ss_pred CCceE--E-----EEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCc-ceeEEEcCCCCEEEEEECCC-CEEEE
Confidence 10011 1 2333 5677876 37899999998887532223322211 33443223444588765433 33444
Q ss_pred EEEEcCCCce
Q 003791 205 YQINAMNGEL 214 (795)
Q Consensus 205 ~ald~~tG~~ 214 (795)
..+|..+|+.
T Consensus 297 ~~~d~~~~~~ 306 (430)
T 3tc9_A 297 SDYDWKTKRL 306 (430)
T ss_dssp EEEETTTTEE
T ss_pred EeCCcccccc
Confidence 4455555554
No 217
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=93.07 E-value=2.7 Score=50.05 Aligned_cols=200 Identities=10% Similarity=0.093 Sum_probs=103.6
Q ss_pred CCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEecc--Ccccc
Q 003791 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLR--GSKHS 130 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~--~~~~s 130 (795)
++.++++|..+-|+.+|+++++...-........+..+ ....++.+.+++.++.+..||..+++...-.... ...++
T Consensus 183 ~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i-~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~ 261 (795)
T 4a2l_A 183 GDQIYIGTSTDGLYTYSITQKTFEKVIPILGTKQIQAI-LQQSPTRIWVATEGAGLFLINPKTKEIKNYLHSPSNPKSIS 261 (795)
T ss_dssp TTEEEEEESSSCEEEEETTTCCEEECC----CCCEEEE-EEEETTEEEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCS
T ss_pred CCCEEEEECCCCEEEEeCCCCeEEEecCCCCCCeeEEE-EEcCCCCEEEEECCCCeEEEeCCCCeEEEeecCCCCccccC
Confidence 67899999876699999988864321111111223333 2334556766664445999999988754221110 01110
Q ss_pred CCceeccccccccCCCeEEEEeCCEEEEEECCCCcEEEEEeccC--cce---eeeeEEEEecCCEEEEEEecCCceeEEE
Q 003791 131 KPLLLVPTNLKVDKDSLILVSSKGCLHAVSSIDGEILWTRDFAA--ESV---EVQQVIQLDESDQIYVVGYAGSSQFHAY 205 (795)
Q Consensus 131 ~~~~~~~~~~~~~~~~~V~V~~~g~l~ald~~tG~~~W~~~~~~--~~~---~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ 205 (795)
.. .+.. ...+.++.+.+...+.|..+|..+++...-...+. ..+ ....+ .....+.+++.+..++ +.
T Consensus 262 ~~-~i~~--i~~d~~g~lWigt~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i-~~D~~g~lWigt~~~G----l~ 333 (795)
T 4a2l_A 262 SN-YIRS--LAMDSQNRLWIGTFNDLNIYHEGTDSFASYSSNPVENGSLSQRSVRSI-FMDSQGGMWLGTYFGG----LN 333 (795)
T ss_dssp CS-BEEE--EEECTTSCEEEEESSCEEEEETTTTEEEEECCCTTSTTSCSSSCEEEE-EECTTSCEEEEESSSC----EE
T ss_pred CC-eEEE--EEEcCCCCEEEEeCChhheEcCCCCeEEEEecCCCCCCCCCCCcEEEE-EEeCCcCEEEEECCCC----eE
Confidence 11 1111 13455678888765579999999887554332221 111 12222 2345788998666554 78
Q ss_pred EEEcCCCceeeeeeeeccCCcccc---eEEec-CcEEEEEECCCCeEEEEEeecCeeeeEEEe
Q 003791 206 QINAMNGELLNHETAAFSGGFVGD---VALVS-SDTLVTLDTTRSILVTVSFKNRKIAFQETH 264 (795)
Q Consensus 206 ald~~tG~~~w~~~v~~~~~~~~~---~~~vg-~~~lv~~d~~~~~L~v~~l~sg~~~~~~~~ 264 (795)
.+|..++....-.....+..+... +++.+ ++.+ |+-...+-|...+..+++ ++.+.
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~l-WiGt~~~Gl~~~~~~~~~--~~~~~ 393 (795)
T 4a2l_A 334 YYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNL-WIGTNDGGLNLYNPITQR--FTSYT 393 (795)
T ss_dssp EECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCE-EEEESSSCEEEECTTTCC--EEEEC
T ss_pred EeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCE-EEEECCCCeEEEcCCCCc--EEEEe
Confidence 888877764432211112333332 22222 2222 222234457777766665 44443
No 218
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=92.98 E-value=0.78 Score=50.18 Aligned_cols=154 Identities=8% Similarity=-0.016 Sum_probs=80.6
Q ss_pred CCEEEEEeCCCEEEEEECcCCccceEEEcCCc-ceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccC
Q 003791 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~-~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~ 131 (795)
++.++.++.+|.|...|.+++........... ..+..+.....+..++.++.++.|+.||.. |+.++......... .
T Consensus 177 ~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v-~ 254 (435)
T 4e54_B 177 TNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKV-T 254 (435)
T ss_dssp TTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCE-E
T ss_pred CCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceE-E
Confidence 56799999999999999987765433322221 112223222344456656667899999984 66666555433222 1
Q ss_pred CceeccccccccCCCeEEE-Ee-CCEEEEEECCCCcEEEEEeccCc-ceeeeeEEEEecCCEEEEEEecCCceeEEEEEE
Q 003791 132 PLLLVPTNLKVDKDSLILV-SS-KGCLHAVSSIDGEILWTRDFAAE-SVEVQQVIQLDESDQIYVVGYAGSSQFHAYQIN 208 (795)
Q Consensus 132 ~~~~~~~~~~~~~~~~V~V-~~-~g~l~ald~~tG~~~W~~~~~~~-~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald 208 (795)
.+.+. .+ .+.+++ .+ ++.+...|..+++..-......+ ......+..+..+..++..+.+| .+..+|
T Consensus 255 ~v~~~-----p~-~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~----~i~iwd 324 (435)
T 4e54_B 255 HVALN-----PC-CDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKS----EIRVYS 324 (435)
T ss_dssp EEEEC-----TT-CSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSS----CEEEEE
T ss_pred eeeec-----CC-CceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCC----EEEEEE
Confidence 11111 12 233443 33 77777777766643211111000 00011111122344555545455 577889
Q ss_pred cCCCceeeee
Q 003791 209 AMNGELLNHE 218 (795)
Q Consensus 209 ~~tG~~~w~~ 218 (795)
..+|+.....
T Consensus 325 ~~~~~~~~~~ 334 (435)
T 4e54_B 325 ASQWDCPLGL 334 (435)
T ss_dssp SSSSSSEEEE
T ss_pred CCCCccceEE
Confidence 9998876544
No 219
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=92.97 E-value=4.7 Score=42.49 Aligned_cols=109 Identities=20% Similarity=0.238 Sum_probs=60.7
Q ss_pred CCEEEEEeC---CC--EEEEEECcCCccceEEEcCCc--------ceeeeeeeeeCCEEEEEEc-c-----CCeEEEEeC
Q 003791 53 RKRVVVSTE---EN--VIASLDLRHGEIFWRHVLGIN--------DVVDGIDIALGKYVITLSS-D-----GSTLRAWNL 113 (795)
Q Consensus 53 ~~~v~vat~---~g--~l~ALn~~tG~ivWR~~l~~~--------~~i~~l~~~~g~~~V~Vs~-~-----g~~v~A~d~ 113 (795)
++++|++.. .+ .|.-++ +|++. .++.. ....++. ...++.+++.. . +.+|..||+
T Consensus 27 ~g~~~v~~~~~~~~~~~l~~~~--~g~~~---~~p~~~~~~~~~~~~p~gv~-~d~~g~L~v~D~g~~~~~~~~i~~~d~ 100 (343)
T 2qe8_A 27 DGRLFLSLHQFYQPEMQVAELT--QDGLI---PFPPQSGNAIITFDTVLGIK-SDGNGIVWMLDNGNQSKSVPKLVAWDT 100 (343)
T ss_dssp TSCEEEEECGGGCCSCSEEEEE--TTEEE---ESCCCCSSCCCCCSCEEEEE-ECSSSEEEEEECHHHHTSCCEEEEEET
T ss_pred CCCEEEEeCCCCCCceEEEEEC--CCCee---cCCCcccCcccceeEeeEEE-EcCCCcEEEEcCCCCcCCCCeEEEEEC
Confidence 677888852 34 788888 77653 22110 1122332 23345555533 2 468999999
Q ss_pred CCCcEeEEEeccCccccCCceecccccccc-CCCeEEEE-----eCCEEEEEECCCCcEEEEE
Q 003791 114 PDGQMVWESFLRGSKHSKPLLLVPTNLKVD-KDSLILVS-----SKGCLHAVSSIDGEILWTR 170 (795)
Q Consensus 114 ~tG~llWe~~~~~~~~s~~~~~~~~~~~~~-~~~~V~V~-----~~g~l~ald~~tG~~~W~~ 170 (795)
.+|+++-.+.+..... ... ..+.+...+ .++.+++. .++.|+.+|..+|+. |+.
T Consensus 101 ~tg~~~~~~~~~~~~~-~~~-~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~-~r~ 160 (343)
T 2qe8_A 101 LNNQLSRVIYLPPPIT-LSN-SFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLA-ARV 160 (343)
T ss_dssp TTTEEEEEEECCTTTS-CTT-CCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCE-EEE
T ss_pred CCCeEEEEEECChhhc-ccc-cccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCE-EEE
Confidence 9999876666543211 000 000111233 14577776 257899999998874 654
No 220
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=92.93 E-value=11 Score=39.84 Aligned_cols=191 Identities=10% Similarity=0.048 Sum_probs=91.5
Q ss_pred EEEEEeCC--CEEE--EEECcCCccceEEEc--CCcceeeeeeeeeCCEEEEEEccCCeEEEEeCC-CCcEeEEEeccCc
Q 003791 55 RVVVSTEE--NVIA--SLDLRHGEIFWRHVL--GINDVVDGIDIALGKYVITLSSDGSTLRAWNLP-DGQMVWESFLRGS 127 (795)
Q Consensus 55 ~v~vat~~--g~l~--ALn~~tG~ivWR~~l--~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~-tG~llWe~~~~~~ 127 (795)
.+||++.. +-|+ .+|+++|++.-.... +.......+....++..+++++.+ .++.||.. +|++.........
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~ 82 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG 82 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC
Confidence 47888864 3344 567889976422222 211123233223344556666655 89999997 9988654332211
Q ss_pred cccCCceeccccccccCCCe-EEE--E--------------eCCEEEEEECC-CCcEEEEEec---cCcceeeeeEEEEe
Q 003791 128 KHSKPLLLVPTNLKVDKDSL-ILV--S--------------SKGCLHAVSSI-DGEILWTRDF---AAESVEVQQVIQLD 186 (795)
Q Consensus 128 ~~s~~~~~~~~~~~~~~~~~-V~V--~--------------~~g~l~ald~~-tG~~~W~~~~---~~~~~~~~~vv~s~ 186 (795)
. .+..+ ....++. +++ . .+|.+..++.. +|+..=.... .... .+..+..+.
T Consensus 83 g---~~~~~----~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~sp 154 (365)
T 1jof_A 83 G---HPRAN----DADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENT-GIHGMVFDP 154 (365)
T ss_dssp S---SGGGG----CTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTC-CEEEEEECT
T ss_pred C---CCccE----EECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCC-cceEEEECC
Confidence 0 00111 1222444 232 2 25667777665 5765322211 1111 133333233
Q ss_pred cCCEEEEEEecCCceeEEEEEEcC-CCceeeeeeeeccC-Cc-ccceEEe-cCcEEEEEECCCCeEEEEEee--cCe
Q 003791 187 ESDQIYVVGYAGSSQFHAYQINAM-NGELLNHETAAFSG-GF-VGDVALV-SSDTLVTLDTTRSILVTVSFK--NRK 257 (795)
Q Consensus 187 ~~~~Vyvv~~~g~~~~~v~ald~~-tG~~~w~~~v~~~~-~~-~~~~~~v-g~~~lv~~d~~~~~L~v~~l~--sg~ 257 (795)
++..+|+.. .+.. .+..+|.. +|+......+..+. +- ...+.+- .+..+++.+...+.+.+.++. +|+
T Consensus 155 dG~~l~~~~-~~~~--~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~ 228 (365)
T 1jof_A 155 TETYLYSAD-LTAN--KLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHM 228 (365)
T ss_dssp TSSEEEEEE-TTTT--EEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCC
T ss_pred CCCEEEEEc-CCCC--EEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCc
Confidence 444576544 3322 56666766 88864333333221 11 1112222 334666666556777777665 455
No 221
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=92.89 E-value=6.2 Score=43.58 Aligned_cols=147 Identities=9% Similarity=0.122 Sum_probs=75.6
Q ss_pred CCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccC-----CeEEEEeCCCCcEeEEEeccCc
Q 003791 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDG-----STLRAWNLPDGQMVWESFLRGS 127 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g-----~~v~A~d~~tG~llWe~~~~~~ 127 (795)
++.||++...+.|..+|+++|++.-- ........++.+...++ +|++..+ ..+..++...+. .+...+...
T Consensus 152 ~g~Lyv~D~~~~I~~id~~~g~v~~~--~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~-~~~~~~~~~ 227 (433)
T 4hw6_A 152 YDDLYWVGQRDAFRHVDFVNQYVDIK--TTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGF-TERLSLCNA 227 (433)
T ss_dssp TCEEEEECBTSCEEEEETTTTEEEEE--CCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTT-CCEEEEEEC
T ss_pred CCEEEEEeCCCCEEEEECCCCEEEEe--ecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCe-ecccccccc
Confidence 47899998778999999998876422 22211123342223333 6665432 135555554332 222222111
Q ss_pred cccCCceeccccccccC-CCeEEEE--eCCEEEEEECCCCcEEEEEe-ccCcceeeeeEEEEecCCEEEEEEecCCceeE
Q 003791 128 KHSKPLLLVPTNLKVDK-DSLILVS--SKGCLHAVSSIDGEILWTRD-FAAESVEVQQVIQLDESDQIYVVGYAGSSQFH 203 (795)
Q Consensus 128 ~~s~~~~~~~~~~~~~~-~~~V~V~--~~g~l~ald~~tG~~~W~~~-~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~ 203 (795)
.. |.....+. ++.+++. .+++|+++|..+|...+... ...... +..+.....++.+|+.....+ +
T Consensus 228 ~~-------P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~-~~~ia~dpdG~~LYvad~~~~---~ 296 (433)
T 4hw6_A 228 RG-------AKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGS-NFHIVWHPTGDWAYIIYNGKH---C 296 (433)
T ss_dssp SS-------BCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSS-CEEEEECTTSSEEEEEETTTT---E
T ss_pred CC-------CCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCC-cccEEEeCCCCEEEEEeCCCC---E
Confidence 00 11113333 5778886 37899999999998854432 221111 112322234456887554333 5
Q ss_pred EEEEE--cCCCce
Q 003791 204 AYQIN--AMNGEL 214 (795)
Q Consensus 204 v~ald--~~tG~~ 214 (795)
+..+| ..+|..
T Consensus 297 I~~~~~d~~~~~~ 309 (433)
T 4hw6_A 297 IYRVDYNRETGKL 309 (433)
T ss_dssp EEEEEBCTTTCCB
T ss_pred EEEEeCCCCCccc
Confidence 55555 446654
No 222
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=92.72 E-value=10 Score=39.08 Aligned_cols=150 Identities=12% Similarity=0.085 Sum_probs=77.9
Q ss_pred CCEEEEEeCC---CEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEc-cCCeEEEEeCCCCc-EeEEEeccCc
Q 003791 53 RKRVVVSTEE---NVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSS-DGSTLRAWNLPDGQ-MVWESFLRGS 127 (795)
Q Consensus 53 ~~~v~vat~~---g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~-~g~~v~A~d~~tG~-llWe~~~~~~ 127 (795)
++++|+++.. ..|+.+|+.+|++.....+.......+.. ...++.++++. ..+.|+.+|..+|+ .+|.......
T Consensus 82 dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~-~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~ 160 (306)
T 2p4o_A 82 NGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGIT-PLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLA 160 (306)
T ss_dssp TSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEE-ESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGS
T ss_pred CCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCccc-ccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccc
Confidence 5668988743 36899999999875444443221122321 12334455554 35689999998774 3443221100
Q ss_pred --cccCCceeccccccccCCCeEEEEe--CCEEEEEECCC-CcE----EEEEeccCcceeeeeEEEEecCCEEEEEEecC
Q 003791 128 --KHSKPLLLVPTNLKVDKDSLILVSS--KGCLHAVSSID-GEI----LWTRDFAAESVEVQQVIQLDESDQIYVVGYAG 198 (795)
Q Consensus 128 --~~s~~~~~~~~~~~~~~~~~V~V~~--~g~l~ald~~t-G~~----~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g 198 (795)
...... ..+.....+ ++.+||.. .++|++++... |+. .|. .... |..+. ...++.+|+....+
T Consensus 161 ~~~~~~~~-~~pngis~d-g~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~-~~~~----P~gi~-vd~dG~l~va~~~~ 232 (306)
T 2p4o_A 161 RSNSESVF-PAANGLKRF-GNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFV-EQTN----IDDFA-FDVEGNLYGATHIY 232 (306)
T ss_dssp CSSTTCCS-CSEEEEEEE-TTEEEEEETTTTEEEEEEBCTTSCBCCCEEEE-ESCC----CSSEE-EBTTCCEEEECBTT
T ss_pred cccccCCC-CcCCCcCcC-CCEEEEEeCCCCEEEEEEeCCCCCCCccEEEe-ccCC----CCCeE-ECCCCCEEEEeCCC
Confidence 000000 011111122 35677763 78899998764 532 121 1111 22232 23467788765544
Q ss_pred CceeEEEEEEcCCCcee
Q 003791 199 SSQFHAYQINAMNGELL 215 (795)
Q Consensus 199 ~~~~~v~ald~~tG~~~ 215 (795)
+ +|..+|+. |+..
T Consensus 233 ~---~V~~~~~~-G~~~ 245 (306)
T 2p4o_A 233 N---SVVRIAPD-RSTT 245 (306)
T ss_dssp C---CEEEECTT-CCEE
T ss_pred C---eEEEECCC-CCEE
Confidence 3 68888875 8763
No 223
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=92.70 E-value=2.4 Score=50.46 Aligned_cols=149 Identities=10% Similarity=-0.015 Sum_probs=87.0
Q ss_pred CCEEEEEeCCCEEEEEECcCCccceEEEcCC---cceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccc
Q 003791 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGI---NDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKH 129 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~---~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~ 129 (795)
++.|+++|..+-|..+|+++|+. ++.... ...+..+ ....++.+.+++. +.|..+|..+|+...-........
T Consensus 417 ~g~lWigt~~~Gl~~~~~~~~~~--~~~~~~~~~~~~v~~i-~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~ 492 (781)
T 3v9f_A 417 EGNLWFGTYLGNISYYNTRLKKF--QIIELEKNELLDVRVF-YEDKNKKIWIGTH-AGVFVIDLASKKVIHHYDTSNSQL 492 (781)
T ss_dssp TSCEEEEETTEEEEEECSSSCEE--EECCSTTTCCCCEEEE-EECTTSEEEEEET-TEEEEEESSSSSCCEEECTTTSSC
T ss_pred CCCEEEEeccCCEEEEcCCCCcE--EEeccCCCCCCeEEEE-EECCCCCEEEEEC-CceEEEeCCCCeEEecccCccccc
Confidence 67799999888899999999864 332211 1123333 2344667777766 469999999988655443221111
Q ss_pred cCCceeccccccccCCCeEEEEe-CCEEEEEECCCCcEEEEEeccC--cceeeeeEEEEecCCEEEEEEecCCceeEEEE
Q 003791 130 SKPLLLVPTNLKVDKDSLILVSS-KGCLHAVSSIDGEILWTRDFAA--ESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQ 206 (795)
Q Consensus 130 s~~~~~~~~~~~~~~~~~V~V~~-~g~l~ald~~tG~~~W~~~~~~--~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~a 206 (795)
....+. ....+.++.+.+.. ++.|+++|..+++... +.... +......+. ...++.+++.+..| -+..
T Consensus 493 -~~~~i~--~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~-~~~~~~l~~~~i~~i~-~d~~g~lWi~T~~G----lv~~ 563 (781)
T 3v9f_A 493 -LENFVR--SIAQDSEGRFWIGTFGGGVGIYTPDMQLVRK-FNQYEGFCSNTINQIY-RSSKGQMWLATGEG----LVCF 563 (781)
T ss_dssp -SCSCEE--EEEECTTCCEEEEESSSCEEEECTTCCEEEE-ECTTTTCSCSCEEEEE-ECTTSCEEEEETTE----EEEE
T ss_pred -ccceeE--EEEEcCCCCEEEEEcCCCEEEEeCCCCeEEE-ccCCCCCCCCeeEEEE-ECCCCCEEEEECCC----ceEE
Confidence 000111 11345567788876 4679999998876443 22211 111122222 23577888766533 2388
Q ss_pred EEcCCCce
Q 003791 207 INAMNGEL 214 (795)
Q Consensus 207 ld~~tG~~ 214 (795)
+|+++++.
T Consensus 564 ~d~~~~~~ 571 (781)
T 3v9f_A 564 PSARNFDY 571 (781)
T ss_dssp SCTTTCCC
T ss_pred ECCCCCcE
Confidence 89988864
No 224
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=92.55 E-value=4.9 Score=46.57 Aligned_cols=104 Identities=8% Similarity=-0.033 Sum_probs=54.1
Q ss_pred CCEEEEEeCCCEEEEEECcCCccceEEEcCCc-----------------ceeeeeeeeeCCEEEEEEccCCeEEEEeCCC
Q 003791 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGIN-----------------DVVDGIDIALGKYVITLSSDGSTLRAWNLPD 115 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~-----------------~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~t 115 (795)
++.++..+.++ | .+|.+||+.+=+..+... ..+..+....+ +.++++.+ +.++.||..+
T Consensus 35 g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~~-~~i~~~d~~~ 110 (706)
T 2z3z_A 35 GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFTQ-GGLVGFDMLA 110 (706)
T ss_dssp TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEET-TEEEEEETTT
T ss_pred CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEEC-CEEEEEECCC
Confidence 45666677777 6 999999986101111111 11333322223 34443543 6999999999
Q ss_pred CcEeEEEeccCccccCCceeccccccccCCCeEEEEeCCEEEEEECCC-----CcEEE
Q 003791 116 GQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSSKGCLHAVSSID-----GEILW 168 (795)
Q Consensus 116 G~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~~~g~l~ald~~t-----G~~~W 168 (795)
|++.--...... . ..+.+.| + ++.++...++.|+.+|..+ |+.+-
T Consensus 111 ~~~~~l~~~~~~-~-~~~~~Sp-----d-G~~la~~~~~~i~v~~~~~~~~~~g~~~~ 160 (706)
T 2z3z_A 111 RKVTYLFDTNEE-T-ASLDFSP-----V-GDRVAYVRNHNLYIARGGKLGEGMSRAIA 160 (706)
T ss_dssp TEEEEEECCTTC-C-TTCEECT-----T-SSEEEEEETTEEEEEECBCTTSCCCCCEE
T ss_pred CceEEccCCccc-c-cCCcCCC-----C-CCEEEEEECCeEEEEecCcccccCCCcEE
Confidence 987543332222 1 2222322 2 2344445789999999998 87653
No 225
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=92.54 E-value=10 Score=38.76 Aligned_cols=70 Identities=11% Similarity=0.143 Sum_probs=48.0
Q ss_pred CCCEEEEEe-CCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEc-cCCeEEEEeCCCCcEeEEEe
Q 003791 52 GRKRVVVST-EENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSS-DGSTLRAWNLPDGQMVWESF 123 (795)
Q Consensus 52 ~~~~v~vat-~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~-~g~~v~A~d~~tG~llWe~~ 123 (795)
+++++|+.+ +++.|+.||+. |++..+..+.......++. ..+++.++|+. ..+.+..++..+...+|...
T Consensus 37 ~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa-~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~ 108 (255)
T 3qqz_A 37 QSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIE-YIGDNQFVISDERDYAIYVISLTPNSEVKILK 108 (255)
T ss_dssp TTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEE-ECSTTEEEEEETTTTEEEEEEECTTCCEEEEE
T ss_pred CCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeE-EeCCCEEEEEECCCCcEEEEEcCCCCeeeeee
Confidence 467899855 56899999997 9998888886543344553 34566666654 34688888876555567543
No 226
>2zuy_A YESX protein; beta-propeller, lyase; 1.65A {Bacillus subtilis}
Probab=92.10 E-value=2.4 Score=48.52 Aligned_cols=147 Identities=18% Similarity=0.195 Sum_probs=78.5
Q ss_pred EEEEEECcCCccceEEEcCCc-cee-----------e----eeeeeeCC--EEEEEEcc--CCeEEEEeCCCCc--EeEE
Q 003791 64 VIASLDLRHGEIFWRHVLGIN-DVV-----------D----GIDIALGK--YVITLSSD--GSTLRAWNLPDGQ--MVWE 121 (795)
Q Consensus 64 ~l~ALn~~tG~ivWR~~l~~~-~~i-----------~----~l~~~~g~--~~V~Vs~~--g~~v~A~d~~tG~--llWe 121 (795)
.|..+|-.||+.+|+..+..+ +.+ + +.....|+ .+|+.-+. -..|.|||..+|+ .+|+
T Consensus 234 yL~vfdG~TG~~l~t~~~~p~rg~~~~WGD~yGnR~drf~~~vayLDG~~Ps~v~~rG~Ytr~~v~A~d~~~g~L~~~W~ 313 (620)
T 2zuy_A 234 YLTVFKGETGEALTTVEYEPPRGKLEDWGDGYGNRMDRFLAGTAYLDGERPSLVMARGYYTRTVLVAYDFRNGRLKKRWV 313 (620)
T ss_dssp EEEEEETTTCCEEEEEECSSCCCSGGGGTSSSSTTTTCEEEEEECTTCC-CEEEEEECSSSSCEEEEEEEETTEEEEEEE
T ss_pred EEEEEcCCCcceeeecccCCCcCccccccccccccccccceeEEecCCCCceEEEecCcccceeEEEEEccCCceeeeeE
Confidence 379999999999999988432 111 1 11001122 23343331 2469999999995 6999
Q ss_pred EeccCcc---c----cCCceeccccccccCCC--eEEEEeCCEEEEEECCCCcEEEEEeccCccee-eeeEEEEecCCEE
Q 003791 122 SFLRGSK---H----SKPLLLVPTNLKVDKDS--LILVSSKGCLHAVSSIDGEILWTRDFAAESVE-VQQVIQLDESDQI 191 (795)
Q Consensus 122 ~~~~~~~---~----s~~~~~~~~~~~~~~~~--~V~V~~~g~l~ald~~tG~~~W~~~~~~~~~~-~~~vv~s~~~~~V 191 (795)
+....+. . ...+ .+. .+++++ .|++.+ .++| .+|+.+|+.....+... ...+-+...+-.|
T Consensus 314 ~ds~~~~~~~~~gqg~H~~-sva---DVDGDG~dEIv~Gs----~~iD-~dG~~L~st~~gHGDa~hv~d~dP~rpGlev 384 (620)
T 2zuy_A 314 FDSNQPGHEAYAGQGNHSL-SVA---DVDGDGKDEIIYGA----MAVD-HDGTGLYSTGLGHGDAMHVGDLDPSRKGLEV 384 (620)
T ss_dssp EETTSTTCGGGTTCCCSSC-EEE---CCSSSSSCEEEETT----EEEC-TTSSEEEECSCCCCSCEEEECSCTTSSSCEE
T ss_pred ecCCCCcccccccccCcCc-eEE---ecCCCCceeEEEee----eEEC-CCCCEEeecCCCCCceeEEEecCCCCCCCEE
Confidence 9875431 1 0111 222 334433 344422 2566 89999999876433320 0000000112245
Q ss_pred EEEEecCCceeEEEEEEcCCCceeeeee
Q 003791 192 YVVGYAGSSQFHAYQINAMNGELLNHET 219 (795)
Q Consensus 192 yvv~~~g~~~~~v~ald~~tG~~~w~~~ 219 (795)
|.+.-.+....-+...|+.||+++|+..
T Consensus 385 ~~~~E~~~~~~G~~~~DA~tG~vlw~~~ 412 (620)
T 2zuy_A 385 FQVHEDATKPYGLSLRDAGTGEILWGVH 412 (620)
T ss_dssp EEECCCTTSSCSEEEEETTTCCEEEEEC
T ss_pred EEEecCCCCCCceEEEECCCCcEEEEec
Confidence 5433221111124567999999999984
No 227
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=91.94 E-value=13 Score=38.59 Aligned_cols=189 Identities=12% Similarity=0.053 Sum_probs=93.0
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccC
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~ 131 (795)
++..++.++.++.|.-.|.++|+.+-+..-- ...+..+.....+..++.++.++.++.||.. |............. .
T Consensus 87 ~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h-~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~-~~~~~~~~~~~~~~-~ 163 (343)
T 2xzm_R 87 ENCFAISSSWDKTLRLWDLRTGTTYKRFVGH-QSEVYSVAFSPDNRQILSAGAEREIKLWNIL-GECKFSSAEKENHS-D 163 (343)
T ss_dssp STTEEEEEETTSEEEEEETTSSCEEEEEECC-CSCEEEEEECSSTTEEEEEETTSCEEEEESS-SCEEEECCTTTSCS-S
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEEEcCC-CCcEEEEEECCCCCEEEEEcCCCEEEEEecc-CCceeeeecccCCC-c
Confidence 4567889999999999999999887665432 2234444222233344445556799999987 44333222110000 0
Q ss_pred CceeccccccccC---------CCeEEEE-eCCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCce
Q 003791 132 PLLLVPTNLKVDK---------DSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQ 201 (795)
Q Consensus 132 ~~~~~~~~~~~~~---------~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~ 201 (795)
....+.. ..+. ...++.. .+|.+...| .+++....+....... ..+..+..+..+...+.+|
T Consensus 164 ~v~~~~~--~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v--~~~~~s~~g~~l~sgs~dg--- 235 (343)
T 2xzm_R 164 WVSCVRY--SPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNV--NHLSISPNGKYIATGGKDK--- 235 (343)
T ss_dssp CEEEEEE--CCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCE--EEEEECTTSSEEEEEETTC---
T ss_pred eeeeeee--ccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccc--eEEEECCCCCEEEEEcCCC---
Confidence 0001100 0000 1233333 388998888 5666666654433222 2222122333444433344
Q ss_pred eEEEEEEcC-CCceeeeeeeeccCCcccceEEe-cCcEEEEEECCCCeEEEEEeecCe
Q 003791 202 FHAYQINAM-NGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 202 ~~v~ald~~-tG~~~w~~~v~~~~~~~~~~~~v-g~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
.+...|.. .+....... ....+. .+.+- .+.++++.. .+.+.+-++.+++
T Consensus 236 -~v~iwd~~~~~~~~~~~~--~~~~v~-~v~~sp~~~~la~~~--d~~v~iw~~~~~~ 287 (343)
T 2xzm_R 236 -KLLIWDILNLTYPQREFD--AGSTIN-QIAFNPKLQWVAVGT--DQGVKIFNLMTQS 287 (343)
T ss_dssp -EEEEEESSCCSSCSEEEE--CSSCEE-EEEECSSSCEEEEEE--SSCEEEEESSSCC
T ss_pred -eEEEEECCCCcccceeec--CCCcEE-EEEECCCCCEEEEEC--CCCEEEEEeCCCC
Confidence 67778874 333332221 111111 11121 223444433 3567888887755
No 228
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=91.89 E-value=6.2 Score=46.17 Aligned_cols=156 Identities=14% Similarity=0.122 Sum_probs=82.1
Q ss_pred cCCCEEEEEeC-----CCEEEEEECcC------CccceEEEcCCcceeeeeeeeeCCEEEEEEccC---CeEEEEeCCCC
Q 003791 51 TGRKRVVVSTE-----ENVIASLDLRH------GEIFWRHVLGINDVVDGIDIALGKYVITLSSDG---STLRAWNLPDG 116 (795)
Q Consensus 51 ~~~~~v~vat~-----~g~l~ALn~~t------G~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g---~~v~A~d~~tG 116 (795)
++++.|++.+. .+.|+.+|..+ |+..|+.............-..|+.+++.+..+ ..|+.||..+|
T Consensus 242 pDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~ 321 (710)
T 2xdw_A 242 DDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDP 321 (710)
T ss_dssp TTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSC
T ss_pred CCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 34555666654 57899999988 766677766544322222113466666666533 47999999988
Q ss_pred cE-eEEEeccCccccCCceeccccccccCCCeEEEE--eCC--EEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEE
Q 003791 117 QM-VWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS--SKG--CLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQI 191 (795)
Q Consensus 117 ~l-lWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~--~~g--~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~V 191 (795)
.. .|+.-+..... ..+..+ ....++.+++. .++ +|+.++..+|+..-+...+... ...+..+..++.+
T Consensus 322 ~~~~~~~l~~~~~~-~~~~~~----~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~--v~~~~~s~d~~~l 394 (710)
T 2xdw_A 322 EESKWKVLVPEHEK-DVLEWV----ACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGS--VVGYSGQKKDTEI 394 (710)
T ss_dssp CGGGCEEEECCCSS-CEEEEE----EEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSE--EEEEECCTTCSEE
T ss_pred CcccceeccCCCCC-CeEEEE----EEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCce--EEEEecCCCCCEE
Confidence 64 67765443210 011111 11113444443 354 5788888788766555544221 1112111123344
Q ss_pred EEEEecCCceeEEEEEEcCCCc
Q 003791 192 YVVGYAGSSQFHAYQINAMNGE 213 (795)
Q Consensus 192 yvv~~~g~~~~~v~ald~~tG~ 213 (795)
++.......-..++.+|+.+|+
T Consensus 395 ~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 395 FYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEECSSCCCEEEEEETTSSS
T ss_pred EEEEeCCCCCCEEEEEECCCCc
Confidence 4432221112367777887776
No 229
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=91.84 E-value=13 Score=38.27 Aligned_cols=193 Identities=7% Similarity=-0.015 Sum_probs=103.9
Q ss_pred CCEEEEEeCC----------CEEEEEECcCCccceEEEcCCcceee-eeeeeeCCEEEEEEccC-----CeEEEEeCCCC
Q 003791 53 RKRVVVSTEE----------NVIASLDLRHGEIFWRHVLGINDVVD-GIDIALGKYVITLSSDG-----STLRAWNLPDG 116 (795)
Q Consensus 53 ~~~v~vat~~----------g~l~ALn~~tG~ivWR~~l~~~~~i~-~l~~~~g~~~V~Vs~~g-----~~v~A~d~~tG 116 (795)
+++||+.... +.+..+|+.++ .|++.-+.+..-. ......++.+++++|.+ ..+..+|..++
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~--~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 147 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTN--QWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERD 147 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTT--EEEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCC--eEeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCC
Confidence 6778876543 56899999887 4988654332111 11123466666666521 36889999876
Q ss_pred cEeEEEeccCccccCCceeccccccccCCCeEEEEe-------CCEEEEEECCCCcEEEEEeccCcce-eeeeEEEEecC
Q 003791 117 QMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSS-------KGCLHAVSSIDGEILWTRDFAAESV-EVQQVIQLDES 188 (795)
Q Consensus 117 ~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~~-------~g~l~ald~~tG~~~W~~~~~~~~~-~~~~vv~s~~~ 188 (795)
.|+....-+........ ... ++.+++.+ ...+..+|..++ .|+.-.+.+.- ....+ ...+
T Consensus 148 --~W~~~~~~p~~r~~~~~-----~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~--~~~~ 215 (308)
T 1zgk_A 148 --EWHLVAPMLTRRIGVGV-----AVL-NRLLYAVGGFDGTNRLNSAECYYPERN--EWRMITAMNTIRSGAGV--CVLH 215 (308)
T ss_dssp --EEEECCCCSSCCBSCEE-----EEE-TTEEEEECCBCSSCBCCCEEEEETTTT--EEEECCCCSSCCBSCEE--EEET
T ss_pred --eEeECCCCCccccceEE-----EEE-CCEEEEEeCCCCCCcCceEEEEeCCCC--eEeeCCCCCCccccceE--EEEC
Confidence 47764322211011111 112 56677753 246888998776 58764332211 01112 2358
Q ss_pred CEEEEEEecCC--ceeEEEEEEcCCCceeeeeeeeccCCccc-ceEEecCcEEEEEEC----CCCeEEEEEeecCeeeeE
Q 003791 189 DQIYVVGYAGS--SQFHAYQINAMNGELLNHETAAFSGGFVG-DVALVSSDTLVTLDT----TRSILVTVSFKNRKIAFQ 261 (795)
Q Consensus 189 ~~Vyvv~~~g~--~~~~v~ald~~tG~~~w~~~v~~~~~~~~-~~~~vg~~~lv~~d~----~~~~L~v~~l~sg~~~~~ 261 (795)
+.+|++|-..+ ..-.+..+|+.++ .|+..-..|..... .+.++++.+++..-. ....+.+.|+++++ ..
T Consensus 216 ~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~--W~ 291 (308)
T 1zgk_A 216 NCIYAAGGYDGQDQLNSVERYDVETE--TWTFVAPMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDT--WS 291 (308)
T ss_dssp TEEEEECCBCSSSBCCCEEEEETTTT--EEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTE--EE
T ss_pred CEEEEEeCCCCCCccceEEEEeCCCC--cEEECCCCCCCccceEEEEECCEEEEEcCcCCCcccceEEEEcCCCCE--Ee
Confidence 89998874321 1235889999876 47664344433333 233335444443211 12357777877766 44
Q ss_pred EE
Q 003791 262 ET 263 (795)
Q Consensus 262 ~~ 263 (795)
.+
T Consensus 292 ~~ 293 (308)
T 1zgk_A 292 EV 293 (308)
T ss_dssp EE
T ss_pred ec
Confidence 43
No 230
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=91.79 E-value=7.6 Score=40.27 Aligned_cols=146 Identities=9% Similarity=0.003 Sum_probs=78.3
Q ss_pred EEEEEeCCCEEEEEECcCCcc-ceEEEcCC-----------------cceeeeeeeeeCCEEEEEEccCCeEEEEeCCCC
Q 003791 55 RVVVSTEENVIASLDLRHGEI-FWRHVLGI-----------------NDVVDGIDIALGKYVITLSSDGSTLRAWNLPDG 116 (795)
Q Consensus 55 ~v~vat~~g~l~ALn~~tG~i-vWR~~l~~-----------------~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG 116 (795)
.+|+.+..+.|..+|+++|+. .|...... .....++.....++.++|+..+..++.+|..+|
T Consensus 32 ~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~~~i~~~d~~~g 111 (322)
T 2fp8_A 32 GFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCYYHLSVVGSEGG 111 (322)
T ss_dssp SEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETTTEEEEECTTCE
T ss_pred EEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECCCCEEEEeCCCC
Confidence 499999999999999988754 34431110 011223422212456776654456999998877
Q ss_pred cEeEEEec-cCccccCCceeccccccccC-CCeEEEEe-------------------CCEEEEEECCCCcEEEEE-eccC
Q 003791 117 QMVWESFL-RGSKHSKPLLLVPTNLKVDK-DSLILVSS-------------------KGCLHAVSSIDGEILWTR-DFAA 174 (795)
Q Consensus 117 ~llWe~~~-~~~~~s~~~~~~~~~~~~~~-~~~V~V~~-------------------~g~l~ald~~tG~~~W~~-~~~~ 174 (795)
....-... .+... ..+.....+. ++.+++.. .|.|+++|..+|+..-.. ....
T Consensus 112 ~~~~~~~~~~~~~~-----~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~ 186 (322)
T 2fp8_A 112 HATQLATSVDGVPF-----KWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHV 186 (322)
T ss_dssp ECEEEESEETTEEC-----SCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEESC
T ss_pred EEEEecccCCCCcc-----cccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCcc
Confidence 64322111 11111 0111124454 56788753 268999999888754221 1111
Q ss_pred cceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcCCC
Q 003791 175 ESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNG 212 (795)
Q Consensus 175 ~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~tG 212 (795)
+..+.....++.+|+.....+ ++..++..++
T Consensus 187 ----p~gia~~~dg~~lyv~d~~~~---~I~~~~~~~~ 217 (322)
T 2fp8_A 187 ----PGGAEVSADSSFVLVAEFLSH---QIVKYWLEGP 217 (322)
T ss_dssp ----CCEEEECTTSSEEEEEEGGGT---EEEEEESSST
T ss_pred ----CcceEECCCCCEEEEEeCCCC---eEEEEECCCC
Confidence 222321223345887544333 7888887653
No 231
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=91.72 E-value=7.3 Score=44.89 Aligned_cols=182 Identities=7% Similarity=0.039 Sum_probs=99.9
Q ss_pred CCCEEEEEeC-CCEEEEEECcCCccceEEEcCCcceeeeeeee--eCCEEEEEEc------------------cCCeEEE
Q 003791 52 GRKRVVVSTE-ENVIASLDLRHGEIFWRHVLGINDVVDGIDIA--LGKYVITLSS------------------DGSTLRA 110 (795)
Q Consensus 52 ~~~~v~vat~-~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~--~g~~~V~Vs~------------------~g~~v~A 110 (795)
+++.+|+... ++.|+.+|.++.+...-..++......++++. -+.+.||+++ ..+.+.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 3556999775 46899999999998886677655445555431 2334566663 2358999
Q ss_pred EeCCCCcEeEEEeccCccccCCceeccccccccCCCeEEEEe-C-CEEEEEECCCC-cEEEEEeccCcceeeeeEEEEec
Q 003791 111 WNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSS-K-GCLHAVSSIDG-EILWTRDFAAESVEVQQVIQLDE 187 (795)
Q Consensus 111 ~d~~tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~~-~-g~l~ald~~tG-~~~W~~~~~~~~~~~~~vv~s~~ 187 (795)
+|.++.++.|+..+.+.. +...+ ..+ ++.+|+.+ + ....-++..+- ..-|-.-...+.. ... ...
T Consensus 180 ID~~t~~v~~qI~Vgg~p---d~~~~----spd-Gk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~--~~~--v~~ 247 (595)
T 1fwx_A 180 VDADKWEVAWQVLVSGNL---DNCDA----DYE-GKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEI--EKA--IAA 247 (595)
T ss_dssp EETTTTEEEEEEEESSCC---CCEEE----CSS-SSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHH--HHH--HHH
T ss_pred EECCCCeEEEEEEeCCCc---cceEE----CCC-CCEEEEEecCcccCcchhhccccccceEEEeeccce--eEe--ccC
Confidence 999999999999986532 11111 112 34555543 1 11111111110 0112111100000 000 123
Q ss_pred CCEEEEEEecCCceeEEEEEEcCC--Cce-eeeeeeeccCCcccceEEe-cCcEEEEEECCCCeEEEEEeecC
Q 003791 188 SDQIYVVGYAGSSQFHAYQINAMN--GEL-LNHETAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFKNR 256 (795)
Q Consensus 188 ~~~Vyvv~~~g~~~~~v~ald~~t--G~~-~w~~~v~~~~~~~~~~~~v-g~~~lv~~d~~~~~L~v~~l~sg 256 (795)
+...++ + .|..+|.++ |+. +....+.. ...+ +.+. ++.++++.+...+.+.++|+.+.
T Consensus 248 Gk~~~i----~----~V~VID~~~~~~~~~~~~Ipvg~--~PhG-v~~sPDGk~v~V~~~~s~~VsVid~~~~ 309 (595)
T 1fwx_A 248 GDYQEL----N----GVKVVDGRKEASSLFTRYIPIAN--NPHG-CNMAPDKKHLCVAGKLSPTVTVLDVTRF 309 (595)
T ss_dssp TCSEEE----T----TEEEEECSGGGCCSSEEEEEEES--SCCC-EEECTTSSEEEEECTTSSBEEEEEGGGH
T ss_pred CCeeEE----C----cEEEEeCcccCCceeEEEEecCC--CceE-EEEcCCCCEEEEeCCCCCeEEEEECccc
Confidence 444553 3 388999998 665 44443321 1111 2222 45677788877888999999864
No 232
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=91.58 E-value=11 Score=37.01 Aligned_cols=102 Identities=13% Similarity=-0.003 Sum_probs=57.5
Q ss_pred cCCeEEEEeCCCCcEeEEEeccCccccCCceeccccccccCCCeEEEEeCCEEEEEECCC-CcEEEEEeccCcceeeeeE
Q 003791 104 DGSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSSKGCLHAVSSID-GEILWTRDFAAESVEVQQV 182 (795)
Q Consensus 104 ~g~~v~A~d~~tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~~~g~l~ald~~t-G~~~W~~~~~~~~~~~~~v 182 (795)
.++.|+.||..+|+............ .+.+.+ + ++.+++..++.|+.+|..+ |+..-......... +..+
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~~~v~--~~~~sp-----d-g~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~-~~~~ 90 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTPELFE--APNWSP-----D-GKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATIC-NNDH 90 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEESSCCE--EEEECT-----T-SSEEEEEETTEEEEEESSSCCSCEECCCTTCCCB-CSCC
T ss_pred cceeEEEEeCCCCceeeeccCCcceE--eeEECC-----C-CCEEEEEcCCeEEEEeCCCCCCceEecccccccc-ccce
Confidence 45789999999999885555433221 122222 2 2345555799999999999 87653332221111 1122
Q ss_pred EEEecCCEEEEEEecCCceeEEEEEEcCCCce
Q 003791 183 IQLDESDQIYVVGYAGSSQFHAYQINAMNGEL 214 (795)
Q Consensus 183 v~s~~~~~Vyvv~~~g~~~~~v~ald~~tG~~ 214 (795)
..+..+..+++.+........+..+|..+|+.
T Consensus 91 ~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~ 122 (297)
T 2ojh_A 91 GISPDGALYAISDKVEFGKSAIYLLPSTGGTP 122 (297)
T ss_dssp EECTTSSEEEEEECTTTSSCEEEEEETTCCCC
T ss_pred EECCCCCEEEEEEeCCCCcceEEEEECCCCce
Confidence 22334445555443322345788899888764
No 233
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=91.54 E-value=12 Score=37.39 Aligned_cols=192 Identities=12% Similarity=0.013 Sum_probs=99.5
Q ss_pred CCCEEEEEeC-CCEEEEEECcCCccceEEEcCCc-ceeeeeeeeeCCEEEEEEc-cCCeEEEEeCCCCcEeEEEeccCcc
Q 003791 52 GRKRVVVSTE-ENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIALGKYVITLSS-DGSTLRAWNLPDGQMVWESFLRGSK 128 (795)
Q Consensus 52 ~~~~v~vat~-~g~l~ALn~~tG~ivWR~~l~~~-~~i~~l~~~~g~~~V~Vs~-~g~~v~A~d~~tG~llWe~~~~~~~ 128 (795)
.++.||++.. .+.|..+|+.++.+ +...... ....++.+...++.+|++. ..+.|..+|.. |... +......
T Consensus 46 ~~~~ly~~d~~~~~I~~~~~~g~~~--~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~-g~~~-~~~~~~~- 120 (267)
T 1npe_A 46 VDKVVYWTDISEPSIGRASLHGGEP--TTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMD-GTQR-RVLFDTG- 120 (267)
T ss_dssp TTTEEEEEETTTTEEEEEESSSCCC--EEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCSC-EEEECSS-
T ss_pred CCCEEEEEECCCCEEEEEecCCCCc--EEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcC-CCCE-EEEEECC-
Confidence 3678998886 57999999866543 2222222 1223442222345566654 45689999875 4321 1111111
Q ss_pred ccCCceeccccccccC-CCeEEEEe----CCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeE
Q 003791 129 HSKPLLLVPTNLKVDK-DSLILVSS----KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFH 203 (795)
Q Consensus 129 ~s~~~~~~~~~~~~~~-~~~V~V~~----~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~ 203 (795)
. ..+. ....+. ++.+++.. .+.+++++.. |...=..... ....|..+.....++.+|+.....+ +
T Consensus 121 ~-~~P~----~i~vd~~~g~lyv~~~~~~~~~I~~~~~d-g~~~~~~~~~-~~~~P~gia~d~~~~~lyv~d~~~~---~ 190 (267)
T 1npe_A 121 L-VNPR----GIVTDPVRGNLYWTDWNRDNPKIETSHMD-GTNRRILAQD-NLGLPNGLTFDAFSSQLCWVDAGTH---R 190 (267)
T ss_dssp C-SSEE----EEEEETTTTEEEEEECCSSSCEEEEEETT-SCCCEEEECT-TCSCEEEEEEETTTTEEEEEETTTT---E
T ss_pred C-CCcc----EEEEeeCCCEEEEEECCCCCcEEEEEecC-CCCcEEEEEC-CCCCCcEEEEcCCCCEEEEEECCCC---E
Confidence 1 0111 112333 46777763 3688888754 4322111111 1112444432234678998665444 7
Q ss_pred EEEEEcCCCceeeeee-eeccCCcccceEEecCcEEEEEECCCCeEEEEEeecCeeeeEEEe
Q 003791 204 AYQINAMNGELLNHET-AAFSGGFVGDVALVSSDTLVTLDTTRSILVTVSFKNRKIAFQETH 264 (795)
Q Consensus 204 v~ald~~tG~~~w~~~-v~~~~~~~~~~~~vg~~~lv~~d~~~~~L~v~~l~sg~~~~~~~~ 264 (795)
+..+|+.++....... ...|.+ + -+.++.++++|..++.+.+++..+|+. .+.++
T Consensus 191 I~~~~~~g~~~~~~~~~~~~P~g----i-~~d~~~lyva~~~~~~v~~~d~~~g~~-~~~i~ 246 (267)
T 1npe_A 191 AECLNPAQPGRRKVLEGLQYPFA----V-TSYGKNLYYTDWKTNSVIAMDLAISKE-MDTFH 246 (267)
T ss_dssp EEEEETTEEEEEEEEECCCSEEE----E-EEETTEEEEEETTTTEEEEEETTTTEE-EEEEC
T ss_pred EEEEecCCCceEEEecCCCCceE----E-EEeCCEEEEEECCCCeEEEEeCCCCCc-eEEEc
Confidence 8889987544322111 111211 1 235577778888888999999988872 44444
No 234
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=91.36 E-value=21 Score=39.70 Aligned_cols=108 Identities=17% Similarity=0.275 Sum_probs=60.4
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccC
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~ 131 (795)
++..+++++.++.+.-.|. +|+.+....-... .+..+....++..++.++.++.++.||. +|+++-......... .
T Consensus 191 ~~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~-~v~~~~~s~dg~~l~~~~~d~~i~~w~~-~~~~~~~~~~~~~~v-~ 266 (577)
T 2ymu_A 191 DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSS-SVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSV-N 266 (577)
T ss_dssp TSSCEEEEETTSEEEEECT-TSCEEEEEECCSS-CEEEEEECTTSSCEEEEETTSCEEEECT-TSCEEEEECCCSSCE-E
T ss_pred CCCEEEEEcCCCEEEEEeC-CCcEEEEEecCCC-CEEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEEecCCCCE-E
Confidence 4566889999999998884 7777665443222 3444422233334444555679999996 677765554433222 1
Q ss_pred CceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEE
Q 003791 132 PLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTR 170 (795)
Q Consensus 132 ~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~ 170 (795)
.+.+.+ + ...++.. .++.+...|. +|+..-..
T Consensus 267 ~v~~~~-----d-~~~l~~~~~d~~i~~w~~-~~~~~~~~ 299 (577)
T 2ymu_A 267 GVAFRP-----D-GQTIASASDDKTVKLWNR-NGQLLQTL 299 (577)
T ss_dssp EEEECT-----T-SSEEEEEETTSCEEEEET-TSCEEEEE
T ss_pred EEEEcC-----C-CCEEEEEeCCCEEEEEeC-CCcEEEEE
Confidence 111111 1 2334334 3777777774 55554443
No 235
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=91.33 E-value=1.8 Score=45.60 Aligned_cols=67 Identities=10% Similarity=0.034 Sum_probs=33.0
Q ss_pred CCCEEEEEeCCCEEEEEECcCCc-cceEEEcCC-cceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcE
Q 003791 52 GRKRVVVSTEENVIASLDLRHGE-IFWRHVLGI-NDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQM 118 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~-ivWR~~l~~-~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~l 118 (795)
+++.+++++.+|.|...|.++|+ ..=...+.. ...+..+.....+..++.++.++.++.||..+++.
T Consensus 66 ~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 134 (377)
T 3dwl_C 66 KSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQEND 134 (377)
T ss_dssp TTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----
T ss_pred CCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCccc
Confidence 45679999999999999999987 111222221 12333332222334455455567999999999874
No 236
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=91.09 E-value=2.4 Score=43.85 Aligned_cols=131 Identities=14% Similarity=0.160 Sum_probs=71.0
Q ss_pred CCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccC------CeEEEEeCCCCcEeEEEeccCccccCCcee
Q 003791 62 ENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDG------STLRAWNLPDGQMVWESFLRGSKHSKPLLL 135 (795)
Q Consensus 62 ~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g------~~v~A~d~~tG~llWe~~~~~~~~s~~~~~ 135 (795)
.+.|+.+|+++|++.--..+. ...++....++..++++... +.|+.||...+. +-......... ..
T Consensus 168 ~~~v~~~d~~~g~~~~~~~~~---~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~----~~ 239 (305)
T 3dr2_A 168 HHSVYRLPPDGSPLQRMADLD---HPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVP----DG 239 (305)
T ss_dssp CEEEEEECSSSCCCEEEEEES---SEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCS----SS
T ss_pred CCeEEEEcCCCCcEEEEecCC---CCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECC----CC
Confidence 368999999999764321121 12233223344456665432 689999987665 22111110000 00
Q ss_pred ccccccccCCCeEEEEeCCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEc
Q 003791 136 VPTNLKVDKDSLILVSSKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINA 209 (795)
Q Consensus 136 ~~~~~~~~~~~~V~V~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~ 209 (795)
.+.....+.++.+++...+.|+.++. +|+..-.+..+.. +..+.....++.+|+.+ .+ .++.++.
T Consensus 240 ~pdgi~~d~~G~lwv~~~~gv~~~~~-~g~~~~~~~~~~~---~~~~~f~~d~~~L~it~-~~----~l~~~~~ 304 (305)
T 3dr2_A 240 LPDGFCVDRGGWLWSSSGTGVCVFDS-DGQLLGHIPTPGT---ASNCTFDQAQQRLFITG-GP----CLWMLPL 304 (305)
T ss_dssp CCCSEEECTTSCEEECCSSEEEEECT-TSCEEEEEECSSC---CCEEEECTTSCEEEEEE-TT----EEEEEEC
T ss_pred CCCeEEECCCCCEEEecCCcEEEECC-CCCEEEEEECCCc---eeEEEEeCCCCEEEEEc-CC----eEEEEEC
Confidence 11112344567788876667999997 7888877776652 23343233445677644 33 4676654
No 237
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=91.06 E-value=4.4 Score=42.52 Aligned_cols=67 Identities=7% Similarity=0.103 Sum_probs=43.0
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcCCc-ceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcE
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQM 118 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~-~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~l 118 (795)
+++.+++++.++.+.-.|..+++..-...+... ..+..+.....+..++.++.++.++.||..++..
T Consensus 72 ~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~ 139 (345)
T 3fm0_A 72 CGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDE 139 (345)
T ss_dssp TSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSC
T ss_pred CCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCC
Confidence 466788999999988888877765444555432 2344442222334444455667999999988753
No 238
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=90.98 E-value=15 Score=37.45 Aligned_cols=147 Identities=7% Similarity=0.047 Sum_probs=80.9
Q ss_pred CCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccCCceeccccccccCCCeEEEEeCCEEEEEECCCCcEEEEEeccC
Q 003791 95 GKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSSKGCLHAVSSIDGEILWTRDFAA 174 (795)
Q Consensus 95 g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~~~g~l~ald~~tG~~~W~~~~~~ 174 (795)
++.++++...+++|+.||+.+|+.. .+...... ..+ ..+.++.+++..++.|+.+|.++|+...-.....
T Consensus 24 ~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~~~~~-----~~i----~~~~dG~l~v~~~~~l~~~d~~~g~~~~~~~~~~ 93 (297)
T 3g4e_A 24 SNSLLFVDIPAKKVCRWDSFTKQVQ-RVTMDAPV-----SSV----ALRQSGGYVATIGTKFCALNWKEQSAVVLATVDN 93 (297)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCEE-EEECSSCE-----EEE----EEBTTSSEEEEETTEEEEEETTTTEEEEEEECCT
T ss_pred CCEEEEEECCCCEEEEEECCCCcEE-EEeCCCce-----EEE----EECCCCCEEEEECCeEEEEECCCCcEEEEEecCC
Confidence 3445555555679999999998763 12222211 111 2233556777778899999999998765444321
Q ss_pred --cceeeeeEEEEecCCEEEEEEecCC--------ceeEEEEEEcCCCceeeee-eeeccCCcccceEEe-cCcEEEEEE
Q 003791 175 --ESVEVQQVIQLDESDQIYVVGYAGS--------SQFHAYQINAMNGELLNHE-TAAFSGGFVGDVALV-SSDTLVTLD 242 (795)
Q Consensus 175 --~~~~~~~vv~s~~~~~Vyvv~~~g~--------~~~~v~ald~~tG~~~w~~-~v~~~~~~~~~~~~v-g~~~lv~~d 242 (795)
+...+..+. ...++.+|+...... ....++.+|+. |+..... .+..|. ...+- .++.+++.|
T Consensus 94 ~~~~~~~~di~-~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~~~~~pn----gi~~spdg~~lyv~~ 167 (297)
T 3g4e_A 94 DKKNNRFNDGK-VDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYFDQVDISN----GLDWSLDHKIFYYID 167 (297)
T ss_dssp TCSSEEEEEEE-ECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEEEEESBEE----EEEECTTSCEEEEEE
T ss_pred CCCCCCCCCEE-ECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEEEeecccccc----ceEEcCCCCEEEEec
Confidence 112122232 234677887654321 22478888874 5543211 111121 22222 334666777
Q ss_pred CCCCeEEEEEe--ecCe
Q 003791 243 TTRSILVTVSF--KNRK 257 (795)
Q Consensus 243 ~~~~~L~v~~l--~sg~ 257 (795)
..++.+.+.++ .+|.
T Consensus 168 ~~~~~i~~~~~d~~~G~ 184 (297)
T 3g4e_A 168 SLSYSVDAFDYDLQTGQ 184 (297)
T ss_dssp GGGTEEEEEEECTTTCC
T ss_pred CCCCcEEEEeccCCCCc
Confidence 76778888877 4555
No 239
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=90.95 E-value=16 Score=37.68 Aligned_cols=187 Identities=11% Similarity=0.091 Sum_probs=95.1
Q ss_pred CEEEEEeCCCEEEEEECcCCccceEEEc-CCcceeeeee-eeeCCEEEEEEcc-----CC------eEEEEeCCCCcEeE
Q 003791 54 KRVVVSTEENVIASLDLRHGEIFWRHVL-GINDVVDGID-IALGKYVITLSSD-----GS------TLRAWNLPDGQMVW 120 (795)
Q Consensus 54 ~~v~vat~~g~l~ALn~~tG~ivWR~~l-~~~~~i~~l~-~~~g~~~V~Vs~~-----g~------~v~A~d~~tG~llW 120 (795)
+.||+....+ +.++|+.+++ |+..- +.+..-.... +..++.+++++|. +. .+..+|+.++ .|
T Consensus 16 ~~i~~~GG~~-~~~yd~~~~~--W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~--~W 90 (318)
T 2woz_A 16 DLILLVNDTA-AVAYDPMENE--CYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSS--EW 90 (318)
T ss_dssp EEEEEECSSE-EEEEETTTTE--EEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTT--EE
T ss_pred chhhhccccc-eEEECCCCCc--eecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCC--cE
Confidence 4577766644 8999999986 88721 1111111111 2345556666762 11 2778898876 57
Q ss_pred EEeccCccccCCceeccccccccCCCeEEEEe--C-------CEEEEEECCCCcEEEEEeccCccee-eeeEEEEecCCE
Q 003791 121 ESFLRGSKHSKPLLLVPTNLKVDKDSLILVSS--K-------GCLHAVSSIDGEILWTRDFAAESVE-VQQVIQLDESDQ 190 (795)
Q Consensus 121 e~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~~--~-------g~l~ald~~tG~~~W~~~~~~~~~~-~~~vv~s~~~~~ 190 (795)
+....-+.......+ ... ++.+++.+ + ..+.++|..++ .|+.-.+.+.-. ...+ ...++.
T Consensus 91 ~~~~~~p~~r~~~~~-----~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~--~~~~~~ 160 (318)
T 2woz_A 91 VGLPPLPSARCLFGL-----GEV-DDKIYVVAGKDLQTEASLDSVLCYDPVAA--KWSEVKNLPIKVYGHNV--ISHNGM 160 (318)
T ss_dssp EECSCBSSCBCSCEE-----EEE-TTEEEEEEEEBTTTCCEEEEEEEEETTTT--EEEEECCCSSCEESCEE--EEETTE
T ss_pred EECCCCCccccccce-----EEE-CCEEEEEcCccCCCCcccceEEEEeCCCC--CEeECCCCCCcccccEE--EEECCE
Confidence 754222111011111 112 46677752 1 35888888776 587644332210 1112 236889
Q ss_pred EEEEEecC---CceeEEEEEEcCCCceeeeeeeeccCCccc-ceEEecCcEEEEEECC----CCeEEEEEeecCe
Q 003791 191 IYVVGYAG---SSQFHAYQINAMNGELLNHETAAFSGGFVG-DVALVSSDTLVTLDTT----RSILVTVSFKNRK 257 (795)
Q Consensus 191 Vyvv~~~g---~~~~~v~ald~~tG~~~w~~~v~~~~~~~~-~~~~vg~~~lv~~d~~----~~~L~v~~l~sg~ 257 (795)
+|++|-.. ...-.+..+|+.+++ |+..-..|..... .+.+.++.+++..-.. ...+.+.|+.+++
T Consensus 161 iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 161 IYCLGGKTDDKKCTNRVFIYNPKKGD--WKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp EEEECCEESSSCBCCCEEEEETTTTE--EEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred EEEEcCCCCCCCccceEEEEcCCCCE--EEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 99876421 112358899998764 7764344443333 2333354444443111 1235566666655
No 240
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=90.52 E-value=11 Score=38.74 Aligned_cols=147 Identities=12% Similarity=0.139 Sum_probs=74.9
Q ss_pred EEEEEEccCCeEEEEeCCCCcEeEEEeccCccccCCceeccccccccCCCeEEEEe--C----CEEEEEECCCCcEEEEE
Q 003791 97 YVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSS--K----GCLHAVSSIDGEILWTR 170 (795)
Q Consensus 97 ~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~~--~----g~l~ald~~tG~~~W~~ 170 (795)
.+++++..++.|+.||+.+|+..-........ +..+ ..+.++.+++.. + +.|+.+|..+|+..-..
T Consensus 57 ~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~----~~~i----~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~ 128 (333)
T 2dg1_A 57 QLFLLDVFEGNIFKINPETKEIKRPFVSHKAN----PAAI----KIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDII 128 (333)
T ss_dssp CEEEEETTTCEEEEECTTTCCEEEEEECSSSS----EEEE----EECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEE
T ss_pred CEEEEECCCCEEEEEeCCCCcEEEEeeCCCCC----cceE----EECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEE
Confidence 33334555678999999999865322211111 1111 223356677763 3 58999999888765222
Q ss_pred eccCcceeeeeEEEEecCCEEEEEEecC---CceeEEEEEEcCCCceeeeeeeeccCCcccceEEe-cCcEEEEEECCCC
Q 003791 171 DFAAESVEVQQVIQLDESDQIYVVGYAG---SSQFHAYQINAMNGELLNHETAAFSGGFVGDVALV-SSDTLVTLDTTRS 246 (795)
Q Consensus 171 ~~~~~~~~~~~vv~s~~~~~Vyvv~~~g---~~~~~v~ald~~tG~~~w~~~v~~~~~~~~~~~~v-g~~~lv~~d~~~~ 246 (795)
........+..+. ...++.+|+.+..+ .....++.+|+.+|+...-.. .......+.+- .++.+++.+...+
T Consensus 129 ~~~~~~~~~~~i~-~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~i~~~~dg~~l~v~~~~~~ 204 (333)
T 2dg1_A 129 EDLSTAYCIDDMV-FDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ---NISVANGIALSTDEKVLWVTETTAN 204 (333)
T ss_dssp CSSSSCCCEEEEE-ECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE---EESSEEEEEECTTSSEEEEEEGGGT
T ss_pred ccCccCCcccceE-ECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeec---CCCcccceEECCCCCEEEEEeCCCC
Confidence 2111111233332 23466788765431 012478999988776542211 00011112221 2234555555556
Q ss_pred eEEEEEeec
Q 003791 247 ILVTVSFKN 255 (795)
Q Consensus 247 ~L~v~~l~s 255 (795)
.+++.++.+
T Consensus 205 ~i~~~d~~~ 213 (333)
T 2dg1_A 205 RLHRIALED 213 (333)
T ss_dssp EEEEEEECT
T ss_pred eEEEEEecC
Confidence 777777753
No 241
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=90.36 E-value=30 Score=39.82 Aligned_cols=150 Identities=11% Similarity=0.134 Sum_probs=79.9
Q ss_pred CEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeee-eCCEEEEEEccCCeEEEEeCCC-----CcEeEEEeccCc
Q 003791 54 KRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIA-LGKYVITLSSDGSTLRAWNLPD-----GQMVWESFLRGS 127 (795)
Q Consensus 54 ~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~-~g~~~V~Vs~~g~~v~A~d~~t-----G~llWe~~~~~~ 127 (795)
+.++++. ++.+..+|.++|+..- .......+...... .|+.+++ +. ++.|+.||..+ |+..-.......
T Consensus 93 ~~~~~~~-~~~i~~~d~~~~~~~~--l~~~~~~~~~~~~SpdG~~la~-~~-~~~i~v~~~~~~~~~~g~~~~~~~~~~~ 167 (706)
T 2z3z_A 93 GLVVLFT-QGGLVGFDMLARKVTY--LFDTNEETASLDFSPVGDRVAY-VR-NHNLYIARGGKLGEGMSRAIAVTIDGTE 167 (706)
T ss_dssp TEEEEEE-TTEEEEEETTTTEEEE--EECCTTCCTTCEECTTSSEEEE-EE-TTEEEEEECBCTTSCCCCCEESCSCCBT
T ss_pred CeEEEEE-CCEEEEEECCCCceEE--ccCCcccccCCcCCCCCCEEEE-EE-CCeEEEEecCcccccCCCcEEeccCCCC
Confidence 5555554 4999999999997642 22222222222122 4555556 43 46899999998 876532222111
Q ss_pred cc-------------cCCceeccccccccCCCeEEEEe----------------------------------CCEEEEEE
Q 003791 128 KH-------------SKPLLLVPTNLKVDKDSLILVSS----------------------------------KGCLHAVS 160 (795)
Q Consensus 128 ~~-------------s~~~~~~~~~~~~~~~~~V~V~~----------------------------------~g~l~ald 160 (795)
.. ...+...+ + ++.+++.. +..|+.+|
T Consensus 168 ~~~~g~~~~~ee~~~~~~~~~Sp-----D-g~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d 241 (706)
T 2z3z_A 168 TLVYGQAVHQREFGIEKGTFWSP-----K-GSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYH 241 (706)
T ss_dssp TEEESSCCGGGCTTCCCSEEECT-----T-SSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEE
T ss_pred CeEcccchhhhhcCCCceEEECC-----C-CCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEE
Confidence 00 01111211 2 23333332 25788889
Q ss_pred CCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecC-CceeEEEEEEcCCCce
Q 003791 161 SIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAG-SSQFHAYQINAMNGEL 214 (795)
Q Consensus 161 ~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g-~~~~~v~ald~~tG~~ 214 (795)
..+|+..+..........+..+..+.++..+++.+.++ .....+..+|+.+|+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~ 296 (706)
T 2z3z_A 242 LATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRF 296 (706)
T ss_dssp TTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCE
T ss_pred CCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCce
Confidence 88888766543211111123333234455577655553 3346889999999943
No 242
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=90.17 E-value=18 Score=36.98 Aligned_cols=146 Identities=9% Similarity=0.082 Sum_probs=73.1
Q ss_pred CCEE-EEEeCCCEEEEEECcCCcc-ceEEEcCCcceeeeeeeeeCCEEEEEEcc-CCeEEEEeCCCCcEeEEEeccCc-c
Q 003791 53 RKRV-VVSTEENVIASLDLRHGEI-FWRHVLGINDVVDGIDIALGKYVITLSSD-GSTLRAWNLPDGQMVWESFLRGS-K 128 (795)
Q Consensus 53 ~~~v-~vat~~g~l~ALn~~tG~i-vWR~~l~~~~~i~~l~~~~g~~~V~Vs~~-g~~v~A~d~~tG~llWe~~~~~~-~ 128 (795)
++.| ++.+..+.|..+|+ +|+. .|+. ......++. ...++.++++.. ++.|..||.. |+...-...... .
T Consensus 56 g~~l~~~d~~~~~i~~~~~-~g~~~~~~~---~~~~~~gl~-~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~ 129 (305)
T 3dr2_A 56 QRTLVWSDLVGRRVLGWRE-DGTVDVLLD---ATAFTNGNA-VDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKR 129 (305)
T ss_dssp GTEEEEEETTTTEEEEEET-TSCEEEEEE---SCSCEEEEE-ECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEE
T ss_pred CCEEEEEECCCCEEEEEeC-CCCEEEEeC---CCCccceee-ECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCc
Confidence 4444 45556789999998 6653 2332 122233442 233344555543 4689999985 875433221111 0
Q ss_pred ccCCceeccccccccCCCeEEEEe-------------------CCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCC
Q 003791 129 HSKPLLLVPTNLKVDKDSLILVSS-------------------KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESD 189 (795)
Q Consensus 129 ~s~~~~~~~~~~~~~~~~~V~V~~-------------------~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~ 189 (795)
. . .+.....+.++.+++.. .+.|+++|.++|+..-...... +..+..+..+.
T Consensus 130 ~-~----~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~----p~gl~~spdg~ 200 (305)
T 3dr2_A 130 L-N----SPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMADLDH----PNGLAFSPDEQ 200 (305)
T ss_dssp C-S----CCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEEEESS----EEEEEECTTSS
T ss_pred c-C----CCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEecCCC----CcceEEcCCCC
Confidence 0 0 00011334466677731 3679999998887543222211 22333233445
Q ss_pred EEEEEEecCC--ceeEEEEEEcCCCc
Q 003791 190 QIYVVGYAGS--SQFHAYQINAMNGE 213 (795)
Q Consensus 190 ~Vyvv~~~g~--~~~~v~ald~~tG~ 213 (795)
.+|+...... ..-.+..+|..++.
T Consensus 201 ~lyv~~~~~~~~~~~~i~~~~~~~~~ 226 (305)
T 3dr2_A 201 TLYVSQTPEQGHGSVEITAFAWRDGA 226 (305)
T ss_dssp EEEEEECCC---CCCEEEEEEEETTE
T ss_pred EEEEEecCCcCCCCCEEEEEEecCCC
Confidence 6887654310 00156677766554
No 243
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=89.91 E-value=9.6 Score=43.70 Aligned_cols=151 Identities=19% Similarity=0.182 Sum_probs=75.1
Q ss_pred cCCCEEEEEeCC----------CEEEEEECcC------CccceEEEc-CCcceeeeeee-eeCCEEEEEEccC-------
Q 003791 51 TGRKRVVVSTEE----------NVIASLDLRH------GEIFWRHVL-GINDVVDGIDI-ALGKYVITLSSDG------- 105 (795)
Q Consensus 51 ~~~~~v~vat~~----------g~l~ALn~~t------G~ivWR~~l-~~~~~i~~l~~-~~g~~~V~Vs~~g------- 105 (795)
++++.|++++++ +.|+.+|..+ |++ ++.. ........... ..|+.+++.+.++
T Consensus 139 pDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~ 216 (662)
T 3azo_A 139 PERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV--RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEG 216 (662)
T ss_dssp TTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS--EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTC
T ss_pred CCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce--eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCC
Confidence 456678777765 5899999988 654 3333 22222222212 2455566655432
Q ss_pred CeEEEEeCC-CCcE--eEEEecc-CccccCCceeccccccccCCCeEEEEe--CC--EEEEEECCCCcEEEEEeccCcc-
Q 003791 106 STLRAWNLP-DGQM--VWESFLR-GSKHSKPLLLVPTNLKVDKDSLILVSS--KG--CLHAVSSIDGEILWTRDFAAES- 176 (795)
Q Consensus 106 ~~v~A~d~~-tG~l--lWe~~~~-~~~~s~~~~~~~~~~~~~~~~~V~V~~--~g--~l~ald~~tG~~~W~~~~~~~~- 176 (795)
..|+.||.. +|+. .-..... .... ..+... .++.+++.+ ++ .|+.+|..+|+..-........
T Consensus 217 ~~i~~~d~~~~g~~~~~~~l~~~~~~~~-~~~~~s-------pdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~ 288 (662)
T 3azo_A 217 TELKTARVTEDGRFADTRTLLGGPEEAI-AQAEWA-------PDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFA 288 (662)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEETTBCE-EEEEEC-------TTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSS
T ss_pred cEEEEEEECCCCcccccEEeCCCCCceE-cceEEC-------CCCeEEEEECCCCCeEEEEEECCCCceeeccccccccc
Confidence 479999998 6832 1111111 1111 111111 134444443 45 8888888788643211111100
Q ss_pred ---ee--eeeEEEEecCCEEEEEEecCCceeEEEEEEcCCCce
Q 003791 177 ---VE--VQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGEL 214 (795)
Q Consensus 177 ---~~--~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~tG~~ 214 (795)
.. ...+. ...++.+++.+.. ...++..+|..+|+.
T Consensus 289 ~p~w~~~~~~~~-~~~~~~~~~~~~~--~~~~l~~~d~~~~~~ 328 (662)
T 3azo_A 289 GPLWTPGMRWFA-PLANGLIAVVHGK--GAAVLGILDPESGEL 328 (662)
T ss_dssp CCCCSTTCCSEE-ECTTSCEEEEEBS--SSCEEEEEETTTTEE
T ss_pred CccccccCceEe-EeCCCEEEEEEEc--CccEEEEEECCCCcE
Confidence 00 01121 1234555555544 245788889888873
No 244
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=89.88 E-value=18 Score=36.64 Aligned_cols=108 Identities=15% Similarity=0.179 Sum_probs=58.7
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcCCc-ceeeeeeeee--CCEEEEEEccCCeEEEEeCCCCc--EeEEEeccC
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIAL--GKYVITLSSDGSTLRAWNLPDGQ--MVWESFLRG 126 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~-~~i~~l~~~~--g~~~V~Vs~~g~~v~A~d~~tG~--llWe~~~~~ 126 (795)
+++.+++++.++.|.-.|..++.......+... +.+..+.... .+..++.++.++.|+.||..+|+ .+-......
T Consensus 20 ~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~ 99 (297)
T 2pm7_B 20 YGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHS 99 (297)
T ss_dssp TSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCS
T ss_pred CCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCC
Confidence 467799999999999999875533333344322 2344332211 12344435567899999999985 222222222
Q ss_pred ccccCCceeccccccccC-CCeEEEE-eCCEEEEEECCCCc
Q 003791 127 SKHSKPLLLVPTNLKVDK-DSLILVS-SKGCLHAVSSIDGE 165 (795)
Q Consensus 127 ~~~s~~~~~~~~~~~~~~-~~~V~V~-~~g~l~ald~~tG~ 165 (795)
... ....+.+ +. ...++.. .++.+...|..++.
T Consensus 100 ~~v-~~v~~~p-----~~~g~~l~s~s~d~~v~~wd~~~~~ 134 (297)
T 2pm7_B 100 ASV-NSVQWAP-----HEYGPMLLVASSDGKVSVVEFKENG 134 (297)
T ss_dssp SCE-EEEEECC-----GGGCSEEEEEETTSEEEEEEBCSSS
T ss_pred Cce-eEEEeCc-----CCCCcEEEEEECCCcEEEEEecCCC
Confidence 111 1111111 11 2334444 38888888887763
No 245
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=89.88 E-value=20 Score=37.17 Aligned_cols=147 Identities=7% Similarity=0.061 Sum_probs=76.7
Q ss_pred CCEEEEEeCCCEEEEEECcCCccceEEEcCCc---ceeeeeeeeeCCEEEEEEcc-------CCeEEEEeCCCCcEeEEE
Q 003791 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGIN---DVVDGIDIALGKYVITLSSD-------GSTLRAWNLPDGQMVWES 122 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~---~~i~~l~~~~g~~~V~Vs~~-------g~~v~A~d~~tG~llWe~ 122 (795)
+++++++++.+ |+.+|+++|++.--...+.. ..+..+. ...++.++++.. .+.|+.+| +|+..--.
T Consensus 100 dg~l~v~~~~g-l~~~d~~~g~~~~~~~~~~~~~~~~~~~i~-~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~ 175 (326)
T 2ghs_A 100 DSKQLIASDDG-LFLRDTATGVLTLHAELESDLPGNRSNDGR-MHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLF 175 (326)
T ss_dssp TTEEEEEETTE-EEEEETTTCCEEEEECSSTTCTTEEEEEEE-ECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEE
T ss_pred CCeEEEEECCC-EEEEECCCCcEEEEeeCCCCCCCCCCCCEE-ECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEee
Confidence 67788888654 99999999986432222111 1122221 222333555442 24688888 67654221
Q ss_pred eccCccccCCceeccccccccCCC-eEEEEe--CCEEEEEECC--CC-c----EEEEEeccCcceeeeeEEEEecCCEEE
Q 003791 123 FLRGSKHSKPLLLVPTNLKVDKDS-LILVSS--KGCLHAVSSI--DG-E----ILWTRDFAAESVEVQQVIQLDESDQIY 192 (795)
Q Consensus 123 ~~~~~~~s~~~~~~~~~~~~~~~~-~V~V~~--~g~l~ald~~--tG-~----~~W~~~~~~~~~~~~~vv~s~~~~~Vy 192 (795)
. .......+ ....++ .+++.. ++.|++++.. +| + ..+.. .......+..+. ...++.+|
T Consensus 176 ~--~~~~~~~i-------~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~-~~~~~~~p~gi~-~d~~G~lw 244 (326)
T 2ghs_A 176 A--DISIPNSI-------CFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFID-STGIKGGMDGSV-CDAEGHIW 244 (326)
T ss_dssp E--EESSEEEE-------EECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEE-CTTSSSEEEEEE-ECTTSCEE
T ss_pred C--CCcccCCe-------EEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEE-CCCCCCCCCeeE-ECCCCCEE
Confidence 1 10000111 112233 466653 6789999975 77 4 23322 211111133332 23567788
Q ss_pred EEEecCCceeEEEEEEcCCCceeeee
Q 003791 193 VVGYAGSSQFHAYQINAMNGELLNHE 218 (795)
Q Consensus 193 vv~~~g~~~~~v~ald~~tG~~~w~~ 218 (795)
+....++ .+..+|+ +|+.+...
T Consensus 245 va~~~~~---~v~~~d~-~g~~~~~i 266 (326)
T 2ghs_A 245 NARWGEG---AVDRYDT-DGNHIARY 266 (326)
T ss_dssp EEEETTT---EEEEECT-TCCEEEEE
T ss_pred EEEeCCC---EEEEECC-CCCEEEEE
Confidence 8665544 6888998 78876554
No 246
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=89.72 E-value=29 Score=38.66 Aligned_cols=160 Identities=10% Similarity=0.033 Sum_probs=90.3
Q ss_pred CCEEEEEeC--------CCEEEEEECcC-----CccceEEEcCCcc-eeeee-----------eee--eCCEEEEEEc-c
Q 003791 53 RKRVVVSTE--------ENVIASLDLRH-----GEIFWRHVLGIND-VVDGI-----------DIA--LGKYVITLSS-D 104 (795)
Q Consensus 53 ~~~v~vat~--------~g~l~ALn~~t-----G~ivWR~~l~~~~-~i~~l-----------~~~--~g~~~V~Vs~-~ 104 (795)
.+.+||.+- .-.|+.+|.+. |+++-|..++..+ ....+ ... ...+.+++++ .
T Consensus 25 e~~~y~~~~~~~~~~~~~d~la~vDvdp~s~ty~~vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~~r~~l~v~~l~ 104 (462)
T 2ece_A 25 EDLAYVACLYTGTGINRADFIAVVDVNPKSETYSKIVHKVELPYINDELHHFGWNACSSALCPNGKPNIERRFLIVPGLR 104 (462)
T ss_dssp CSEEEEEEECTTTTCCCCCEEEEEECCTTSTTTTSEEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTCCSCEEEEEBTT
T ss_pred ceEEEEEeeccCCCCCCCCeEEEEECCCCCCCcceEEEEEECCCCCCcccccchhhhhhhcccccCCCccCCEEEEccCC
Confidence 555777653 23699999988 9999999998753 11111 002 3356777766 4
Q ss_pred CCeEEEEeCCCC--cEeEEEeccCccc------cC--CceeccccccccCCCeEEEE--eC------CEEEEEECCCCcE
Q 003791 105 GSTLRAWNLPDG--QMVWESFLRGSKH------SK--PLLLVPTNLKVDKDSLILVS--SK------GCLHAVSSIDGEI 166 (795)
Q Consensus 105 g~~v~A~d~~tG--~llWe~~~~~~~~------s~--~~~~~~~~~~~~~~~~V~V~--~~------g~l~ald~~tG~~ 166 (795)
.++|+.+|..+- ++.=...+..+.+ +. ...+.+ ++ ++|. ++ |.+..+|.+|+++
T Consensus 105 s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~p-------dG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v 176 (462)
T 2ece_A 105 SSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGP-------DA-IYISALGNEEGEGPGGILMLDHYSFEP 176 (462)
T ss_dssp TCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECS-------SC-EEEEEEEETTSCSCCEEEEECTTTCCE
T ss_pred CCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECC-------Ce-EEEEcCCCcCCCCCCeEEEEECCCCeE
Confidence 578999998744 2222222210000 00 011111 45 6664 33 7899999999998
Q ss_pred EEEEeccCc-ceeeeeEEEEecCCEEEEEEecC----------------CceeEEEEEEcCCCceeeeeeee
Q 003791 167 LWTRDFAAE-SVEVQQVIQLDESDQIYVVGYAG----------------SSQFHAYQINAMNGELLNHETAA 221 (795)
Q Consensus 167 ~W~~~~~~~-~~~~~~vv~s~~~~~Vyvv~~~g----------------~~~~~v~ald~~tG~~~w~~~v~ 221 (795)
+=+++.+.. ....+.+......+.+| .+-.| ...-+|..+|..+|+.+.+..+.
T Consensus 177 ~~~~~~~~~~~~~~Yd~~~~p~~~~mv-sS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg 247 (462)
T 2ece_A 177 LGKWEIDRGDQYLAYDFWWNLPNEVLV-SSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLG 247 (462)
T ss_dssp EEECCSBCTTCCCCCCEEEETTTTEEE-ECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESC
T ss_pred EEEEccCCCCccccceEEECCCCCEEE-EccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecC
Confidence 866654422 11233343333444444 44311 01127889999999877766553
No 247
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=89.71 E-value=18 Score=37.88 Aligned_cols=70 Identities=14% Similarity=0.088 Sum_probs=47.5
Q ss_pred CCEEEEEeC------CCEEEEEECcCCccceEEEcCCcc-----eeeeeeeeeCCEEEEEEc----cCCeEEEEeCCCCc
Q 003791 53 RKRVVVSTE------ENVIASLDLRHGEIFWRHVLGIND-----VVDGIDIALGKYVITLSS----DGSTLRAWNLPDGQ 117 (795)
Q Consensus 53 ~~~v~vat~------~g~l~ALn~~tG~ivWR~~l~~~~-----~i~~l~~~~g~~~V~Vs~----~g~~v~A~d~~tG~ 117 (795)
+++||+++. .+.|..+|+++|+++-+..++... ....+.+...++.+|++. ..+.|+.||..+|+
T Consensus 77 ~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~ 156 (343)
T 2qe8_A 77 NGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGL 156 (343)
T ss_dssp SSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCC
T ss_pred CCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCC
Confidence 578999874 478999999999987777775321 112332222345777763 34689999999997
Q ss_pred EeEEEe
Q 003791 118 MVWESF 123 (795)
Q Consensus 118 llWe~~ 123 (795)
. |+..
T Consensus 157 ~-~r~~ 161 (343)
T 2qe8_A 157 A-ARVL 161 (343)
T ss_dssp E-EEEC
T ss_pred E-EEEe
Confidence 4 6653
No 248
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=89.58 E-value=15 Score=42.20 Aligned_cols=123 Identities=10% Similarity=0.045 Sum_probs=67.7
Q ss_pred CEEEEEEccCCeEEEEeCCCCcEeEEEeccCc---cccC---------C-------------c---eecccc-ccccCCC
Q 003791 96 KYVITLSSDGSTLRAWNLPDGQMVWESFLRGS---KHSK---------P-------------L---LLVPTN-LKVDKDS 146 (795)
Q Consensus 96 ~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~---~~s~---------~-------------~---~~~~~~-~~~~~~~ 146 (795)
++-+.+|+....|..+|. ||+++|..--... .++. . . ...+.+ .....++
T Consensus 366 dd~~liSsR~~~I~~Id~-tG~V~W~LGg~~~w~~d~~~~~l~Pvd~~G~~~~~~~~~~~~~~~F~~~~gQH~a~~~~~g 444 (571)
T 3elq_A 366 DDSIILSSRHQGVVKIGR-DKQVKWILAPSKGWEKPLASKLLKPVDANGKPITCNENGLCENSDFDFTYTQHTAWISSKG 444 (571)
T ss_dssp TTEEEEEETTTEEEEEET-TSCEEEEESCSTTCCTTGGGGBCEEBCTTSCBCCBCTTSCBSSSSCCCCSSCEEEEECTTS
T ss_pred CCEEEEECCccEEEEEcC-CCcEEEEECCCCCCchhhhhhccccccccCcccccccccccccCCCccccCCcCeEEcCCC
Confidence 446666775448999997 9999999865432 1100 0 0 000000 0111135
Q ss_pred eEEEEeC------------------CEEEEEECCCC--cEEEEEeccCc--cee----eeeEEEEecCCEEEEEEec---
Q 003791 147 LILVSSK------------------GCLHAVSSIDG--EILWTRDFAAE--SVE----VQQVIQLDESDQIYVVGYA--- 197 (795)
Q Consensus 147 ~V~V~~~------------------g~l~ald~~tG--~~~W~~~~~~~--~~~----~~~vv~s~~~~~Vyvv~~~--- 197 (795)
.+.++.+ +..+.+|..+. +++|++..+.+ ..+ -.|.. ..++.++.-+..
T Consensus 445 ~i~vFDNg~~~~~~~p~~~~~~~SR~l~y~ID~~~~Tv~~vw~y~~~~g~~~yS~~~gs~Q~L--~nGN~li~~g~~~~~ 522 (571)
T 3elq_A 445 TLTIFDNGDGRHLEQPALPTMKYSRFVEYKIDEKKGTVQQVWEYGKERGYDFYSPITSIIEYQ--ADRNTMFGFGGSIHL 522 (571)
T ss_dssp CEEEEECCTTGGGSCCSSGGGCCCEEEEEEEETTTTEEEEEEEECGGGGGGGCCSSCCEEEEE--TTTTEEEEEEEEETT
T ss_pred eEEEEeCCCCCCCCcccCCCCCCceEEEEEEcCCCCEEEEEEEecCCCCCCcccccccccEEC--CCCCEEEEecccccc
Confidence 5666531 23466999877 89999964321 111 12222 344555544331
Q ss_pred --CCc--eeEEEEEEcCCCceeeeeeee
Q 003791 198 --GSS--QFHAYQINAMNGELLNHETAA 221 (795)
Q Consensus 198 --g~~--~~~v~ald~~tG~~~w~~~v~ 221 (795)
.+. ..++.-++..+++++|+..+.
T Consensus 523 ~~~g~~~~~~i~E~~~~~~evv~e~~~~ 550 (571)
T 3elq_A 523 FDVGQPTVGKLNEIDYKTKEVKVEIDVL 550 (571)
T ss_dssp TSTTSEEEEEEEEEETTTCCEEEEEEEE
T ss_pred cccCCCCceeEEEECCCCCEEEEEEEec
Confidence 011 458899999888899998754
No 249
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=89.53 E-value=19 Score=37.64 Aligned_cols=193 Identities=11% Similarity=0.080 Sum_probs=98.3
Q ss_pred CCEEEEEeCC-----------CEEEEEECcCCccceEEEcCCc-ceeee-eeeeeCCEEEEEEccC--------------
Q 003791 53 RKRVVVSTEE-----------NVIASLDLRHGEIFWRHVLGIN-DVVDG-IDIALGKYVITLSSDG-------------- 105 (795)
Q Consensus 53 ~~~v~vat~~-----------g~l~ALn~~tG~ivWR~~l~~~-~~i~~-l~~~~g~~~V~Vs~~g-------------- 105 (795)
+++||+.... +.+..+|+.+. .|+..-... ..-.+ .....++.+++++|.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~--~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~ 142 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN--SWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEA 142 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTT--EEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCC--cEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhc
Confidence 6788886543 46899999887 499865433 11111 1123566666667632
Q ss_pred -------------------------CeEEEEeCCCCcEeEEEeccCccccCC-ceeccccccccCCCeEEEEe-------
Q 003791 106 -------------------------STLRAWNLPDGQMVWESFLRGSKHSKP-LLLVPTNLKVDKDSLILVSS------- 152 (795)
Q Consensus 106 -------------------------~~v~A~d~~tG~llWe~~~~~~~~s~~-~~~~~~~~~~~~~~~V~V~~------- 152 (795)
..+..+|+.+. .|+....-+..... ..+ ... ++.+++.+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~~~~~~~~-----~~~-~~~iyv~GG~~~~~~ 214 (357)
T 2uvk_A 143 GKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQ--QWSYAGESPWYGTAGAAV-----VNK-GDKTWLINGEAKPGL 214 (357)
T ss_dssp TTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTT--EEEEEEECSSCCCBSCEE-----EEE-TTEEEEECCEEETTE
T ss_pred CCcccchhhhhhhhccccccccCCcccEEEEeCCCC--cEEECCCCCCCCcccccE-----EEE-CCEEEEEeeecCCCc
Confidence 47999999876 68865332211000 111 112 56666652
Q ss_pred -CCEEEEEECCCCcEEEEEeccCccee-eeeEEEEecCCEEEEEEecCC-------------------ceeEEEEEEcCC
Q 003791 153 -KGCLHAVSSIDGEILWTRDFAAESVE-VQQVIQLDESDQIYVVGYAGS-------------------SQFHAYQINAMN 211 (795)
Q Consensus 153 -~g~l~ald~~tG~~~W~~~~~~~~~~-~~~vv~s~~~~~Vyvv~~~g~-------------------~~~~v~ald~~t 211 (795)
...+..+|.....-.|+.-.+.+.-. .........++.+|++|-... ....+..+|+.+
T Consensus 215 ~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~ 294 (357)
T 2uvk_A 215 RTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHN 294 (357)
T ss_dssp ECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC-
T ss_pred ccCceEEEEecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCC
Confidence 23577787644445688644321100 011111246788998764210 012467889886
Q ss_pred CceeeeeeeeccCCccc-ceEEecCcEEEEEECCC-----CeEEEEEeecCe
Q 003791 212 GELLNHETAAFSGGFVG-DVALVSSDTLVTLDTTR-----SILVTVSFKNRK 257 (795)
Q Consensus 212 G~~~w~~~v~~~~~~~~-~~~~vg~~~lv~~d~~~-----~~L~v~~l~sg~ 257 (795)
. .|+..-..|..... .++.+++.+++..-.+. ..+.++++.+++
T Consensus 295 ~--~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~ 344 (357)
T 2uvk_A 295 G--KWDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNK 344 (357)
T ss_dssp ----CEEEEECSSCCBSSEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCS
T ss_pred C--ceeeCCCCCCCcccceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcE
Confidence 5 47765445544433 33444555555442111 235556666665
No 250
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=89.48 E-value=2.3 Score=49.69 Aligned_cols=105 Identities=13% Similarity=0.146 Sum_probs=61.9
Q ss_pred CCEEEEEeCCCEEEEEECcCCccceEEEcCCcce----eeeeeee-eCCEEEEEEcc--------CCeEEEEeCCCCcEe
Q 003791 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGINDV----VDGIDIA-LGKYVITLSSD--------GSTLRAWNLPDGQMV 119 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~----i~~l~~~-~g~~~V~Vs~~--------g~~v~A~d~~tG~ll 119 (795)
++.+++.+.++.|...|.++|+. ++.+..... +...... .|+.+++.+.. ++.++.||..+|+.+
T Consensus 26 dg~~~~~~~d~~i~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~ 103 (719)
T 1z68_A 26 GQEYLHQSADNNIVLYNIETGQS--YTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFV 103 (719)
T ss_dssp SSEEEEECTTSCEEEEESSSCCE--EEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC
T ss_pred CCeEEEEcCCCCEEEEEcCCCcE--EEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccc
Confidence 44666677789999999999985 344432211 2222222 45555554431 368999999999874
Q ss_pred EEEeccCccccCCceeccccccccCCCeEEEEeCCEEEEEECCCCcEE
Q 003791 120 WESFLRGSKHSKPLLLVPTNLKVDKDSLILVSSKGCLHAVSSIDGEIL 167 (795)
Q Consensus 120 We~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~~~g~l~ald~~tG~~~ 167 (795)
....+.... ..+.+.| + ++.++...++.|+..|..+|+.+
T Consensus 104 ~~~~l~~~~--~~~~~SP-----D-G~~la~~~~~~i~~~~~~~g~~~ 143 (719)
T 1z68_A 104 RGNELPRPI--QYLCWSP-----V-GSKLAYVYQNNIYLKQRPGDPPF 143 (719)
T ss_dssp CSSCCCSSB--CCEEECS-----S-TTCEEEEETTEEEEESSTTSCCE
T ss_pred cceecCccc--ccceECC-----C-CCEEEEEECCeEEEEeCCCCCcE
Confidence 322332221 2222322 3 23444447889999999888754
No 251
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=89.26 E-value=6.6 Score=45.03 Aligned_cols=99 Identities=12% Similarity=0.047 Sum_probs=58.1
Q ss_pred ceeeccccceeEEEecc-----------CceeeeeeeeeccCCCEEEEEeCCCEEEEEECcCCccceEEEcCCcceee--
Q 003791 22 SLYEDQVGLMDWHQQYI-----------GKVKHAVFHTQKTGRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVD-- 88 (795)
Q Consensus 22 Al~edq~G~~dW~~~~v-----------G~~~~~~f~~~~~~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~-- 88 (795)
+..=|..|.+.|..... |.+.-..|.+. .++.+..+.. ..++-+|. +|+++|++.++......
T Consensus 177 ~~i~D~~G~lrW~~~~~~~~~~~~~~~~~~g~l~~~~g~--~nG~l~~g~G-~~i~elD~-~Gkvv~~~~lp~g~~~~HH 252 (571)
T 3elq_A 177 TFIVDTEGEYRWWLDQDTFYDGRDRDINKRGYLMGIRET--PRGTFTAVQG-QHWYEFDM-MGQVLEDHKLPRGFADATH 252 (571)
T ss_dssp EEEECTTSCEEEECCGGGTCCSSSCCGGGCSCCEEEEEC--TTSCEEEEEB-TEEEEECT-TCCEEEEEECCTTEECBCS
T ss_pred eEEEcCCCcEEEEeCcccccccceeeccCCCeEEEEEec--CCCCEEEecC-cEEEEECC-CCcEEEEEECCCCcccccc
Confidence 35557899999998652 11111223321 2444555544 46999997 89999999997541111
Q ss_pred eeee-eeCCEEEEEEc-------------cCCeEEEEeCCCCcEeEEEecc
Q 003791 89 GIDI-ALGKYVITLSS-------------DGSTLRAWNLPDGQMVWESFLR 125 (795)
Q Consensus 89 ~l~~-~~g~~~V~Vs~-------------~g~~v~A~d~~tG~llWe~~~~ 125 (795)
-... ..|.-++.+.. -+..++-+| .||+++|++...
T Consensus 253 D~~~l~nGn~Lv~v~~~d~~~~dG~~~~~vdD~I~EVD-~tGeVv~eW~~~ 302 (571)
T 3elq_A 253 ESIETPNGTVLLRVGKSNYRRDDGVHVTTIRDHILEVD-KSGRVVDVWDLT 302 (571)
T ss_dssp CEEECTTSCEEEEEEETTEECTTSCEECCCSCEEEEEC-TTSCEEEEEEHH
T ss_pred ceEEcCCCcEEEEEecccccCCCCcccceeccEEEEEC-CCCCEEEEEEhH
Confidence 0111 12332332211 134788999 999999999863
No 252
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=89.21 E-value=21 Score=36.36 Aligned_cols=193 Identities=12% Similarity=0.086 Sum_probs=103.8
Q ss_pred CCEEEEEeC------CCEEEEEECcCCccceEEEcCCcceee-eeeeeeCCEEEEEEccC-----CeEEEEeCCCCcEeE
Q 003791 53 RKRVVVSTE------ENVIASLDLRHGEIFWRHVLGINDVVD-GIDIALGKYVITLSSDG-----STLRAWNLPDGQMVW 120 (795)
Q Consensus 53 ~~~v~vat~------~g~l~ALn~~tG~ivWR~~l~~~~~i~-~l~~~~g~~~V~Vs~~g-----~~v~A~d~~tG~llW 120 (795)
+++||+... .+.+..+|+.+++ |+..-+.+..-. ......++.+++++|.+ ..+..||..+++ |
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~--W 136 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQ--WTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNE--W 136 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTE--EEEECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTE--E
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCc--eeeCCCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCe--E
Confidence 677888654 2568999998874 998754432111 11123566666667632 358889988764 7
Q ss_pred EEeccCccccCCceeccccccccCCCeEEEEe---------CCEEEEEECCCCcEEEEEeccCcce-eeeeEEEEecCCE
Q 003791 121 ESFLRGSKHSKPLLLVPTNLKVDKDSLILVSS---------KGCLHAVSSIDGEILWTRDFAAESV-EVQQVIQLDESDQ 190 (795)
Q Consensus 121 e~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~~---------~g~l~ald~~tG~~~W~~~~~~~~~-~~~~vv~s~~~~~ 190 (795)
+....-+........ ... ++.+++.+ -..+..+|..++ .|+.-.+.+.- ....+ ...++.
T Consensus 137 ~~~~~~p~~r~~~~~-----~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~--~~~~~~ 206 (302)
T 2xn4_A 137 FHVAPMNTRRSSVGV-----GVV-GGLLYAVGGYDVASRQCLSTVECYNATTN--EWTYIAEMSTRRSGAGV--GVLNNL 206 (302)
T ss_dssp EEECCCSSCCBSCEE-----EEE-TTEEEEECCEETTTTEECCCEEEEETTTT--EEEEECCCSSCCBSCEE--EEETTE
T ss_pred eecCCCCCcccCceE-----EEE-CCEEEEEeCCCCCCCccccEEEEEeCCCC--cEEECCCCccccccccE--EEECCE
Confidence 765322211011111 112 56677752 135888998876 57764332211 01112 235789
Q ss_pred EEEEEecCCc--eeEEEEEEcCCCceeeeeeeeccCCccc-ceEEecCcEEEEEECC----CCeEEEEEeecCeeeeEEE
Q 003791 191 IYVVGYAGSS--QFHAYQINAMNGELLNHETAAFSGGFVG-DVALVSSDTLVTLDTT----RSILVTVSFKNRKIAFQET 263 (795)
Q Consensus 191 Vyvv~~~g~~--~~~v~ald~~tG~~~w~~~v~~~~~~~~-~~~~vg~~~lv~~d~~----~~~L~v~~l~sg~~~~~~~ 263 (795)
+|++|-..+. .-.+..+|+.++ .|+..-..|..... .+...++.+++..-.+ ...+.+.|+.+++ ...+
T Consensus 207 iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~--W~~~ 282 (302)
T 2xn4_A 207 LYAVGGHDGPLVRKSVEVYDPTTN--AWRQVADMNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDK--WTVV 282 (302)
T ss_dssp EEEECCBSSSSBCCCEEEEETTTT--EEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTE--EEEC
T ss_pred EEEECCCCCCcccceEEEEeCCCC--CEeeCCCCCCccccCeEEEECCEEEEECCcCCCcccccEEEEcCCCCe--EEEC
Confidence 9988643211 235889999876 46654334433333 2333354444433211 1347778877766 5443
No 253
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=89.15 E-value=7.8 Score=40.61 Aligned_cols=157 Identities=13% Similarity=0.032 Sum_probs=75.4
Q ss_pred cCCCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeee-------------------eeCCEEEEEE----ccCCe
Q 003791 51 TGRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDI-------------------ALGKYVITLS----SDGST 107 (795)
Q Consensus 51 ~~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~-------------------~~g~~~V~Vs----~~g~~ 107 (795)
++++.|++++.++.|+.+|..+|+..--...+......+-.+ ..++.+++.. .....
T Consensus 90 pdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~ 169 (396)
T 3c5m_A 90 TDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCR 169 (396)
T ss_dssp TTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEE
T ss_pred CCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcce
Confidence 456678888888899999999998643333222210010000 0111111111 23457
Q ss_pred EEEEeCCCCcEeEEEeccCccccCCceeccccccccCCCeEEEEe---C----CEEEEEECCCCcEEEEEeccCcceeee
Q 003791 108 LRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSS---K----GCLHAVSSIDGEILWTRDFAAESVEVQ 180 (795)
Q Consensus 108 v~A~d~~tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~~---~----g~l~ald~~tG~~~W~~~~~~~~~~~~ 180 (795)
|+.||..+|+...-....... ..+.+ ..+.++.++... . ..|+.+|..+|+..-... ..+...+.
T Consensus 170 l~~~d~~~g~~~~~~~~~~~~--~~~~~-----sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-~~~~~~~~ 241 (396)
T 3c5m_A 170 LIKVDIETGELEVIHQDTAWL--GHPIY-----RPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE-HAEGESCT 241 (396)
T ss_dssp EEEEETTTCCEEEEEEESSCE--EEEEE-----ETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC-CCTTEEEE
T ss_pred EEEEECCCCcEEeeccCCccc--ccceE-----CCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec-cCCCcccc
Confidence 999999999876544322111 01111 110022233322 1 467777776665322111 11111122
Q ss_pred eEEEEecCCEEEEEEec-CCceeEEEEEEcCCCcee
Q 003791 181 QVIQLDESDQIYVVGYA-GSSQFHAYQINAMNGELL 215 (795)
Q Consensus 181 ~vv~s~~~~~Vyvv~~~-g~~~~~v~ald~~tG~~~ 215 (795)
.+..+..+..+++.+.. +.....++.+|+.+|+..
T Consensus 242 ~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~ 277 (396)
T 3c5m_A 242 HEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENE 277 (396)
T ss_dssp EEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEE
T ss_pred ceEECCCCCEEEEEecCCCCccceEEEEECCCCCeE
Confidence 23223344545555554 222235888999999764
No 254
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=88.91 E-value=41 Score=39.34 Aligned_cols=152 Identities=12% Similarity=0.099 Sum_probs=73.5
Q ss_pred cCCCEEEEEeC-C----CEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCC-------------eEEEEe
Q 003791 51 TGRKRVVVSTE-E----NVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGS-------------TLRAWN 112 (795)
Q Consensus 51 ~~~~~v~vat~-~----g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~-------------~v~A~d 112 (795)
+++++|..+++ . ..|.-+|.++|+.+=. .+. ........-..++.+++.+.++. .|+.|+
T Consensus 172 PDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~-~~~~~~~~wspD~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~ 249 (741)
T 1yr2_A 172 DDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELK-WVKFSGLAWLGNDALLYSRFAEPKEGQAFQALNYNQTVWLHR 249 (741)
T ss_dssp TTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEE-EEESCCCEESTTSEEEEEECCCC--------CCCCCEEEEEE
T ss_pred CCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCC-CceeccEEEECCCEEEEEEecCcccccccccCCCCCEEEEEE
Confidence 44555544443 3 3699999999987422 111 10011111112344555443322 488888
Q ss_pred CCCCc----EeEEEeccCccccCCceeccccccccCCCeEEEE-eC-----CEEEEEECCCCcEE-EEEeccCcceeeee
Q 003791 113 LPDGQ----MVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SK-----GCLHAVSSIDGEIL-WTRDFAAESVEVQQ 181 (795)
Q Consensus 113 ~~tG~----llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~-~~-----g~l~ald~~tG~~~-W~~~~~~~~~~~~~ 181 (795)
..+|. ++++..-..... ..+.. ..+ ++.+++. .+ ..|+.+|..+|... |+.-.+...... .
T Consensus 250 lgt~~~~~~lv~~~~~~~~~~-~~~~~-----SpD-G~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~-~ 321 (741)
T 1yr2_A 250 LGTPQSADQPVFATPELPKRG-HGASV-----SSD-GRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQW-D 321 (741)
T ss_dssp TTSCGGGCEEEECCTTCTTCE-EEEEE-----CTT-SCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCE-E
T ss_pred CCCCchhCEEEeccCCCCeEE-EEEEE-----CCC-CCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceE-E
Confidence 87775 444322111000 01111 112 2334443 33 38888888887433 332222111111 1
Q ss_pred EEEEecCCEEEEEEecCCceeEEEEEEcCCCc
Q 003791 182 VIQLDESDQIYVVGYAGSSQFHAYQINAMNGE 213 (795)
Q Consensus 182 vv~s~~~~~Vyvv~~~g~~~~~v~ald~~tG~ 213 (795)
.+ ...++.+|+.+..++.+.+++.+|..+|.
T Consensus 322 ~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 352 (741)
T 1yr2_A 322 FV-DGVGDQLWFVSGDGAPLKKIVRVDLSGST 352 (741)
T ss_dssp EE-EEETTEEEEEECTTCTTCEEEEEECSSSS
T ss_pred EE-eccCCEEEEEECCCCCCCEEEEEeCCCCc
Confidence 22 24677888777655445689999988864
No 255
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=87.96 E-value=28 Score=37.41 Aligned_cols=74 Identities=12% Similarity=0.102 Sum_probs=39.8
Q ss_pred CCEEEEEe-------------CCCEEEEEECcC--CccceEEEcCC--c--c--eeeeeeeee---CCEEEEEEccC---
Q 003791 53 RKRVVVST-------------EENVIASLDLRH--GEIFWRHVLGI--N--D--VVDGIDIAL---GKYVITLSSDG--- 105 (795)
Q Consensus 53 ~~~v~vat-------------~~g~l~ALn~~t--G~ivWR~~l~~--~--~--~i~~l~~~~---g~~~V~Vs~~g--- 105 (795)
++.+|+++ ..|.|+.+|+++ ++.. +..+.. . . ...|+.... +...++|...+
T Consensus 60 ~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~-~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~ 138 (355)
T 3sre_A 60 NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVS-ELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSS 138 (355)
T ss_dssp TSEEEEEECCC-----------CCEEEEEETTSSSCCEE-ECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTC
T ss_pred CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceE-EEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCC
Confidence 67899997 689999999984 4421 222222 1 1 112332222 33345555332
Q ss_pred Ce--EEEEeCCCCcEeEEEeccCc
Q 003791 106 ST--LRAWNLPDGQMVWESFLRGS 127 (795)
Q Consensus 106 ~~--v~A~d~~tG~llWe~~~~~~ 127 (795)
.. +..+|..++.+.+-....+.
T Consensus 139 s~ielf~~d~~~~~~~~~~~~~g~ 162 (355)
T 3sre_A 139 STVEVFKFQEEEKSLLHLKTIRHK 162 (355)
T ss_dssp CEEEEEEEETTTTEEEEEEEECCT
T ss_pred CeEEEEEEECCCCEEEEEeccccC
Confidence 23 66677766777766665543
No 256
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=87.95 E-value=21 Score=34.90 Aligned_cols=140 Identities=12% Similarity=0.029 Sum_probs=72.1
Q ss_pred CCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCC-CcEeEEEeccC-ccccCCceeccc
Q 003791 61 EENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPD-GQMVWESFLRG-SKHSKPLLLVPT 138 (795)
Q Consensus 61 ~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~t-G~llWe~~~~~-~~~s~~~~~~~~ 138 (795)
.++.|..+|..+|++......+. .+..+.....+..++.++ ++.|+.||..+ |+..-...... ... ..+.+.+
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~~--~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~-~~~~~sp- 94 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTPE--LFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICN-NDHGISP- 94 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEESS--CCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBC-SCCEECT-
T ss_pred cceeEEEEeCCCCceeeeccCCc--ceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccc-cceEECC-
Confidence 46789999999998775444332 233332233333444454 46999999999 87653222211 111 1122222
Q ss_pred cccccCCCeEEEEe-----CCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcCCCc
Q 003791 139 NLKVDKDSLILVSS-----KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGE 213 (795)
Q Consensus 139 ~~~~~~~~~V~V~~-----~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~tG~ 213 (795)
+ ++.+++.. ...|+.++..+|+..-- ..... ...+..+..+..+++.+... ...+++.+|..+|+
T Consensus 95 ----d-g~~l~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~---~~~~~~spdg~~l~~~~~~~-~~~~l~~~~~~~~~ 164 (297)
T 2ojh_A 95 ----D-GALYAISDKVEFGKSAIYLLPSTGGTPRLM-TKNLP---SYWHGWSPDGKSFTYCGIRD-QVFDIYSMDIDSGV 164 (297)
T ss_dssp ----T-SSEEEEEECTTTSSCEEEEEETTCCCCEEC-CSSSS---EEEEEECTTSSEEEEEEEET-TEEEEEEEETTTCC
T ss_pred ----C-CCEEEEEEeCCCCcceEEEEECCCCceEEe-ecCCC---ccceEECCCCCEEEEEECCC-CceEEEEEECCCCc
Confidence 2 23344433 36888888777764321 11111 11222223444455333332 24678888888876
Q ss_pred ee
Q 003791 214 LL 215 (795)
Q Consensus 214 ~~ 215 (795)
..
T Consensus 165 ~~ 166 (297)
T 2ojh_A 165 ET 166 (297)
T ss_dssp EE
T ss_pred ce
Confidence 53
No 257
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=86.53 E-value=30 Score=39.44 Aligned_cols=68 Identities=13% Similarity=0.162 Sum_probs=38.3
Q ss_pred cCCCEEEEEeCC--------CEEEEEECc-CCcc-ceEEEcCC-cceeeeeeeeeCCEEEEEEccCC--eEEEEeCCCCc
Q 003791 51 TGRKRVVVSTEE--------NVIASLDLR-HGEI-FWRHVLGI-NDVVDGIDIALGKYVITLSSDGS--TLRAWNLPDGQ 117 (795)
Q Consensus 51 ~~~~~v~vat~~--------g~l~ALn~~-tG~i-vWR~~l~~-~~~i~~l~~~~g~~~V~Vs~~g~--~v~A~d~~tG~ 117 (795)
++++.|++++.+ +.|+.+|.. +|+. ..++.... ...+......-++.+++.+..++ .|+.||..+|+
T Consensus 197 pDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~ 276 (662)
T 3azo_A 197 PDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGA 276 (662)
T ss_dssp TTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCC
T ss_pred CCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCc
Confidence 456667766633 479999998 6732 23333332 12222221122333666665555 89999988887
Q ss_pred E
Q 003791 118 M 118 (795)
Q Consensus 118 l 118 (795)
.
T Consensus 277 ~ 277 (662)
T 3azo_A 277 A 277 (662)
T ss_dssp E
T ss_pred e
Confidence 4
No 258
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=86.49 E-value=28 Score=34.68 Aligned_cols=149 Identities=9% Similarity=0.039 Sum_probs=80.1
Q ss_pred CCEEEEEeC-CCEEEEEECcCCccceEEEcCCc-ceeeeeeeeeCCEEEEEEcc---CCeEEEEeCCCCcEeEEEeccCc
Q 003791 53 RKRVVVSTE-ENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIALGKYVITLSSD---GSTLRAWNLPDGQMVWESFLRGS 127 (795)
Q Consensus 53 ~~~v~vat~-~g~l~ALn~~tG~ivWR~~l~~~-~~i~~l~~~~g~~~V~Vs~~---g~~v~A~d~~tG~llWe~~~~~~ 127 (795)
.+.+|++.. .+.|..+|.. |+.. +...... ....++.+...++.+|++.. .+.|+.++. +|...=... ..
T Consensus 90 ~~~lyv~d~~~~~I~~~~~~-g~~~-~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~-dg~~~~~~~-~~- 164 (267)
T 1npe_A 90 GRTIFWTDSQLDRIEVAKMD-GTQR-RVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHM-DGTNRRILA-QD- 164 (267)
T ss_dssp TTEEEEEETTTTEEEEEETT-SCSC-EEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEET-TSCCCEEEE-CT-
T ss_pred CCeEEEEECCCCEEEEEEcC-CCCE-EEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEec-CCCCcEEEE-EC-
Confidence 567888875 4688888874 4322 1222211 11223322223456666543 357888876 354321111 11
Q ss_pred cccCCceeccccccccC-CCeEEEEe--CCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEE
Q 003791 128 KHSKPLLLVPTNLKVDK-DSLILVSS--KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHA 204 (795)
Q Consensus 128 ~~s~~~~~~~~~~~~~~-~~~V~V~~--~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v 204 (795)
.+ . .|.....+. .+.+++.. .++++++|..++...-... ... .|..+. ..++.+|+....++ .+
T Consensus 165 ~~-~----~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~--~~~-~P~gi~--~d~~~lyva~~~~~---~v 231 (267)
T 1npe_A 165 NL-G----LPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLE--GLQ-YPFAVT--SYGKNLYYTDWKTN---SV 231 (267)
T ss_dssp TC-S----CEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEE--CCC-SEEEEE--EETTEEEEEETTTT---EE
T ss_pred CC-C----CCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEec--CCC-CceEEE--EeCCEEEEEECCCC---eE
Confidence 11 0 011112332 46777763 6899999987554332222 111 244442 46789998665544 78
Q ss_pred EEEEcCCCceeeeee
Q 003791 205 YQINAMNGELLNHET 219 (795)
Q Consensus 205 ~ald~~tG~~~w~~~ 219 (795)
..+|+.+|+.+....
T Consensus 232 ~~~d~~~g~~~~~i~ 246 (267)
T 1npe_A 232 IAMDLAISKEMDTFH 246 (267)
T ss_dssp EEEETTTTEEEEEEC
T ss_pred EEEeCCCCCceEEEc
Confidence 999999999886664
No 259
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=85.67 E-value=18 Score=41.68 Aligned_cols=109 Identities=14% Similarity=0.115 Sum_probs=65.5
Q ss_pred cCCCEEEEEeCCCEEEEEECcCCcc-------ceEEEcCCc---ceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcE--
Q 003791 51 TGRKRVVVSTEENVIASLDLRHGEI-------FWRHVLGIN---DVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQM-- 118 (795)
Q Consensus 51 ~~~~~v~vat~~g~l~ALn~~tG~i-------vWR~~l~~~---~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~l-- 118 (795)
++++.|++++++|.|--.|.++|++ +-....... ..+..+. -..++ +..++.++.++.||..++..
T Consensus 139 PDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVa-wSPdg-Laass~D~tVrlWd~~~~~~~~ 216 (588)
T 2j04_A 139 PIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIV-WYEDV-LVAALSNNSVFSMTVSASSHQP 216 (588)
T ss_dssp SSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEE-EETTE-EEEEETTCCEEEECCCSSSSCC
T ss_pred CCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEE-EcCCc-EEEEeCCCeEEEEECCCCcccc
Confidence 4577899999999999999999874 233222221 2233332 22344 54466678999999998885
Q ss_pred eEEEe--ccCccccCCceeccccccccCCCeEEEEeCCEEEEEECCCCcE-EEEE
Q 003791 119 VWESF--LRGSKHSKPLLLVPTNLKVDKDSLILVSSKGCLHAVSSIDGEI-LWTR 170 (795)
Q Consensus 119 lWe~~--~~~~~~s~~~~~~~~~~~~~~~~~V~V~~~g~l~ald~~tG~~-~W~~ 170 (795)
.|+.- ...... .+ + ... +..++..+++++...|..+|+. ....
T Consensus 217 ~~~tL~~~h~~~V-~s---v----aFs-g~~LASa~~~tIkLWd~~~~~~~~~~~ 262 (588)
T 2j04_A 217 VSRMIQNASRRKI-TD---L----KIV-DYKVVLTCPGYVHKIDLKNYSISSLKT 262 (588)
T ss_dssp CEEEEECCCSSCC-CC---E----EEE-TTEEEEECSSEEEEEETTTTEEEEEEC
T ss_pred ceeeecccccCcE-EE---E----EEE-CCEEEEEeCCeEEEEECCCCeEEEEEc
Confidence 45442 221111 11 1 112 3445555678888888888776 4443
No 260
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=85.67 E-value=16 Score=42.14 Aligned_cols=109 Identities=4% Similarity=-0.085 Sum_probs=59.7
Q ss_pred CCEEEEEeCCCEEEEEECcCCccceEEEcCCcc--eeeeeeee-eCCEEEEEEcc--------CCeEEEEeCCCCcEeEE
Q 003791 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGIND--VVDGIDIA-LGKYVITLSSD--------GSTLRAWNLPDGQMVWE 121 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~--~i~~l~~~-~g~~~V~Vs~~--------g~~v~A~d~~tG~llWe 121 (795)
++++++.+.+|.|...|+++|+..-........ .+..+... .|+.+++.+.+ .+.++.||..+|+. .+
T Consensus 27 dg~~~~~~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~ 105 (723)
T 1xfd_A 27 DTEFIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QS 105 (723)
T ss_dssp SSCBCCCCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EE
T ss_pred CCcEEEEeCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-Ee
Confidence 334444477889999999999875433221110 12223222 35555665432 26899999999986 22
Q ss_pred EeccCccc--cCCceeccccccccCCCeEEEEeCCEEEEEECCCCcEEE
Q 003791 122 SFLRGSKH--SKPLLLVPTNLKVDKDSLILVSSKGCLHAVSSIDGEILW 168 (795)
Q Consensus 122 ~~~~~~~~--s~~~~~~~~~~~~~~~~~V~V~~~g~l~ald~~tG~~~W 168 (795)
........ ...+.+. .+ ++.++..+++.|+..|..+|+.+-
T Consensus 106 l~~~~~~~~~~~~~~~S-----Pd-G~~la~~~~~~i~~~~~~~g~~~~ 148 (723)
T 1xfd_A 106 LDPPEVSNAKLQYAGWG-----PK-GQQLIFIFENNIYYCAHVGKQAIR 148 (723)
T ss_dssp CCCTTCCSCCCSBCCBC-----SS-TTCEEEEETTEEEEESSSSSCCEE
T ss_pred ccCCccccccccccEEC-----CC-CCEEEEEECCeEEEEECCCCceEE
Confidence 22111100 0111121 22 234555567899999999987653
No 261
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=85.61 E-value=49 Score=38.70 Aligned_cols=195 Identities=9% Similarity=0.008 Sum_probs=103.3
Q ss_pred CCCEEEEEeCC-----CEEEEEECcCCccceEEEc-CC-----cce-eeeeeeee--CCEEEEEEccC------CeEEEE
Q 003791 52 GRKRVVVSTEE-----NVIASLDLRHGEIFWRHVL-GI-----NDV-VDGIDIAL--GKYVITLSSDG------STLRAW 111 (795)
Q Consensus 52 ~~~~v~vat~~-----g~l~ALn~~tG~ivWR~~l-~~-----~~~-i~~l~~~~--g~~~V~Vs~~g------~~v~A~ 111 (795)
.++.||+.... +.+..+|+.+++ |+..- +. +.. ........ ++.++++||.+ ..+..|
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~--W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~y 473 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDK--IDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIF 473 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSC--EEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCe--EEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEE
Confidence 36678876653 568999999885 99865 31 111 11111245 56666666532 357888
Q ss_pred eCCCCcEeEEEeccCccccCCceeccccccccCCCeEEEEe----CCEEEEEECCCCcEEEEEeccCc-----ceeeeeE
Q 003791 112 NLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSS----KGCLHAVSSIDGEILWTRDFAAE-----SVEVQQV 182 (795)
Q Consensus 112 d~~tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~~----~g~l~ald~~tG~~~W~~~~~~~-----~~~~~~v 182 (795)
|..+. .|+.-..-+.. ..........++.++|.+ .+.+..+|..+++ |+.-.+.+ ......+
T Consensus 474 d~~t~--~W~~~~~~p~~-----R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~--W~~~~~~g~~p~~r~~~~a~ 544 (695)
T 2zwa_A 474 DMKTR--EWSMIKSLSHT-----RFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEI--FKDVTPKDEFFQNSLVSAGL 544 (695)
T ss_dssp ETTTT--EEEECCCCSBC-----CBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTE--EEECCCSSGGGGSCCBSCEE
T ss_pred eCCCC--cEEECCCCCCC-----cccceEEEEcCCEEEEECCCCCCCCEEEEECCCCc--eEEccCCCCCCCcccceeEE
Confidence 88776 58765322211 111000111156677753 1269999998864 88754421 1111112
Q ss_pred EEEecCCEEEEEEecC----CceeEEEEEEcCCCc----eeeeeeeecc-CCccc-ceEEec-CcEEEEEEC-------C
Q 003791 183 IQLDESDQIYVVGYAG----SSQFHAYQINAMNGE----LLNHETAAFS-GGFVG-DVALVS-SDTLVTLDT-------T 244 (795)
Q Consensus 183 v~s~~~~~Vyvv~~~g----~~~~~v~ald~~tG~----~~w~~~v~~~-~~~~~-~~~~vg-~~~lv~~d~-------~ 244 (795)
+.....+.+|+.|-.. ...-.+..+|+.+.+ ..|+.....| ....+ .+.+++ +.++++.-. .
T Consensus 545 v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~ 624 (695)
T 2zwa_A 545 EFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDR 624 (695)
T ss_dssp EEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCT
T ss_pred EEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCC
Confidence 2111227899887541 112368899998887 3466543322 22222 334446 444443211 1
Q ss_pred CCeEEEEEeecCe
Q 003791 245 RSILVTVSFKNRK 257 (795)
Q Consensus 245 ~~~L~v~~l~sg~ 257 (795)
...+.+.|+.+++
T Consensus 625 ~~~v~~yd~~t~~ 637 (695)
T 2zwa_A 625 TNSIISLDPLSET 637 (695)
T ss_dssp TTSEEEEETTTTE
T ss_pred CCeEEEEECCCCe
Confidence 3457888888876
No 262
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=85.51 E-value=38 Score=35.34 Aligned_cols=157 Identities=10% Similarity=0.143 Sum_probs=86.5
Q ss_pred CCEEEEEeC--CCEEEEEECcCCccceEEEcCCc-ceee-eeeeeeCCEEEEEEcc-C---------CeEEEEeCCCCcE
Q 003791 53 RKRVVVSTE--ENVIASLDLRHGEIFWRHVLGIN-DVVD-GIDIALGKYVITLSSD-G---------STLRAWNLPDGQM 118 (795)
Q Consensus 53 ~~~v~vat~--~g~l~ALn~~tG~ivWR~~l~~~-~~i~-~l~~~~g~~~V~Vs~~-g---------~~v~A~d~~tG~l 118 (795)
+++||+... .+.+..+|+.+..-.|+..-+.+ ..-. ...+..++.+++++|. . ..+..+|+.+.+
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~- 97 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNS- 97 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTE-
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCc-
Confidence 677888654 56899999987667899765433 1111 1112456666666664 1 358899998764
Q ss_pred eEEEeccCc-cccCCceeccccccccCCCeEEEEeC-----------------------------------------CEE
Q 003791 119 VWESFLRGS-KHSKPLLLVPTNLKVDKDSLILVSSK-----------------------------------------GCL 156 (795)
Q Consensus 119 lWe~~~~~~-~~s~~~~~~~~~~~~~~~~~V~V~~~-----------------------------------------g~l 156 (795)
|+.-...+ ........ .. .++.+++.++ ..+
T Consensus 98 -W~~~~~~~p~~r~~~~~-----~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 170 (357)
T 2uvk_A 98 -WVKLMSHAPMGMAGHVT-----FV-HNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFL 170 (357)
T ss_dssp -EEECSCCCSSCCSSEEE-----EE-ETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEE
T ss_pred -EEECCCCCCcccccceE-----EE-ECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccE
Confidence 87643322 11011101 11 2567777542 589
Q ss_pred EEEECCCCcEEEEEeccCcc--eeeeeEEEEecCCEEEEEEecCC---ceeEEEEEEcCCCceeeeeeee
Q 003791 157 HAVSSIDGEILWTRDFAAES--VEVQQVIQLDESDQIYVVGYAGS---SQFHAYQINAMNGELLNHETAA 221 (795)
Q Consensus 157 ~ald~~tG~~~W~~~~~~~~--~~~~~vv~s~~~~~Vyvv~~~g~---~~~~v~ald~~tG~~~w~~~v~ 221 (795)
..+|..+. .|+.-.+.+. .....+ ...++.+|++|-..+ ..-.+..+|...-...|+..-.
T Consensus 171 ~~yd~~~~--~W~~~~~~p~~~~~~~~~--~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~ 236 (357)
T 2uvk_A 171 LSFDPSTQ--QWSYAGESPWYGTAGAAV--VNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAP 236 (357)
T ss_dssp EEEETTTT--EEEEEEECSSCCCBSCEE--EEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCC
T ss_pred EEEeCCCC--cEEECCCCCCCCcccccE--EEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCC
Confidence 99998876 6876543321 110122 245888998763210 1124667776444556876433
No 263
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=85.31 E-value=44 Score=38.42 Aligned_cols=65 Identities=12% Similarity=0.074 Sum_probs=40.4
Q ss_pred cCCCEEEEEeCC---------CEEEEEECcCCccceEEEcCCc-c---eeeeeee-eeCCEEEEEEccCCeEEEEeCCCC
Q 003791 51 TGRKRVVVSTEE---------NVIASLDLRHGEIFWRHVLGIN-D---VVDGIDI-ALGKYVITLSSDGSTLRAWNLPDG 116 (795)
Q Consensus 51 ~~~~~v~vat~~---------g~l~ALn~~tG~ivWR~~l~~~-~---~i~~l~~-~~g~~~V~Vs~~g~~v~A~d~~tG 116 (795)
++++.|++++++ +.+.-.|.++|+. + .+... . .+..... ..|+.+++++. +.|+.||..+|
T Consensus 70 pDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~--~-~l~~~~~~~~~~~~~~~SPdG~~la~~~~--~~i~~~~~~~g 144 (723)
T 1xfd_A 70 PDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP--Q-SLDPPEVSNAKLQYAGWGPKGQQLIFIFE--NNIYYCAHVGK 144 (723)
T ss_dssp TTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC--E-ECCCTTCCSCCCSBCCBCSSTTCEEEEET--TEEEEESSSSS
T ss_pred CCCCEEEEEecCccceeecceeeEEEEECCCCce--E-eccCCccccccccccEECCCCCEEEEEEC--CeEEEEECCCC
Confidence 446667777653 7888999999986 2 23222 1 1221211 24556677554 58999999999
Q ss_pred cEeE
Q 003791 117 QMVW 120 (795)
Q Consensus 117 ~llW 120 (795)
+..-
T Consensus 145 ~~~~ 148 (723)
T 1xfd_A 145 QAIR 148 (723)
T ss_dssp CCEE
T ss_pred ceEE
Confidence 8653
No 264
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=85.26 E-value=31 Score=40.04 Aligned_cols=67 Identities=13% Similarity=0.152 Sum_probs=39.6
Q ss_pred cCCCEEEEEeC-----CCEEEEEECcCCccceEEEcCCcc-------eeeeeeee-eCCEEEEEEc-cC---CeEEEEeC
Q 003791 51 TGRKRVVVSTE-----ENVIASLDLRHGEIFWRHVLGIND-------VVDGIDIA-LGKYVITLSS-DG---STLRAWNL 113 (795)
Q Consensus 51 ~~~~~v~vat~-----~g~l~ALn~~tG~ivWR~~l~~~~-------~i~~l~~~-~g~~~V~Vs~-~g---~~v~A~d~ 113 (795)
.+++++|.... .+.|+..+..+|+ |++.+..+. .+.+.... .|+.++|... .| ..|+.||.
T Consensus 77 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl 154 (695)
T 2bkl_A 77 RRNGRFFYVRTHKDKEKAILYWRQGESGQ--EKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDV 154 (695)
T ss_dssp EETTEEEEEEECTTCSSCEEEEEESTTSC--CEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEET
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCCCC--cEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEEC
Confidence 34666665553 3568888876664 777765331 12222222 4555665533 22 58999999
Q ss_pred CCCcEe
Q 003791 114 PDGQMV 119 (795)
Q Consensus 114 ~tG~ll 119 (795)
.+|+.+
T Consensus 155 ~tg~~~ 160 (695)
T 2bkl_A 155 DSGEWS 160 (695)
T ss_dssp TTCCBC
T ss_pred CCCCCc
Confidence 999864
No 265
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=84.90 E-value=47 Score=37.23 Aligned_cols=106 Identities=14% Similarity=0.169 Sum_probs=55.6
Q ss_pred cCCCeEEEE-eCCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcCCCceeeeeeee
Q 003791 143 DKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHETAA 221 (795)
Q Consensus 143 ~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~tG~~~w~~~v~ 221 (795)
++++.+++. ..+.+..+|.++|+..-....+. . .+..+.++..++..+..++....++.+|+.+|+... +.
T Consensus 120 dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~---~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~---l~ 191 (582)
T 3o4h_A 120 TGEAVVFTGATEDRVALYALDGGGLRELARLPG--F---GFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRV---FD 191 (582)
T ss_dssp CSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--C---EEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEE---EC
T ss_pred CCCeEEEEecCCCCceEEEccCCcEEEeecCCC--c---eEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceE---ee
Confidence 333445554 34444466777776543333222 1 222245666666555553333468999999998652 11
Q ss_pred ccCCcccceEEe-cCcEEEEEECCCC--eEEEEEeecCe
Q 003791 222 FSGGFVGDVALV-SSDTLVTLDTTRS--ILVTVSFKNRK 257 (795)
Q Consensus 222 ~~~~~~~~~~~v-g~~~lv~~d~~~~--~L~v~~l~sg~ 257 (795)
...+....+.+- ++..++..+. .+ .+++.|+.+++
T Consensus 192 ~~~~~~~~~~~SpDG~~l~~~~~-~~~~~i~~~d~~~~~ 229 (582)
T 3o4h_A 192 SGEGSFSSASISPGMKVTAGLET-AREARLVTVDPRDGS 229 (582)
T ss_dssp CSSCEEEEEEECTTSCEEEEEEC-SSCEEEEEECTTTCC
T ss_pred cCCCccccceECCCCCEEEEccC-CCeeEEEEEcCCCCc
Confidence 111111223332 3445554443 45 78888888876
No 266
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=84.78 E-value=13 Score=38.93 Aligned_cols=70 Identities=9% Similarity=-0.094 Sum_probs=39.9
Q ss_pred cCCCEEEEEeCC---CEEEEEECcCCccceEEEcCCcceeee-eee-eeCCEEEEEEccCCeEEEEeCCCCcEeEEEe
Q 003791 51 TGRKRVVVSTEE---NVIASLDLRHGEIFWRHVLGINDVVDG-IDI-ALGKYVITLSSDGSTLRAWNLPDGQMVWESF 123 (795)
Q Consensus 51 ~~~~~v~vat~~---g~l~ALn~~tG~ivWR~~l~~~~~i~~-l~~-~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~ 123 (795)
++++.|+++... ..|+.+|.++|+. ++.......... ... ..++.+++++.. +.++.||..+|+..--..
T Consensus 45 pdG~~l~~~~~~~g~~~l~~~d~~~~~~--~~l~~~~~~~~~~~~~spdg~~l~~~~~~-~~l~~~d~~~~~~~~~~~ 119 (396)
T 3c5m_A 45 QDGKKLLFAGDFDGNRNYYLLNLETQQA--VQLTEGKGDNTFGGFISTDERAFFYVKNE-LNLMKVDLETLEEQVIYT 119 (396)
T ss_dssp TTSCEEEEEECTTSSCEEEEEETTTTEE--EECCCSSCBCTTTCEECTTSSEEEEEETT-TEEEEEETTTCCEEEEEE
T ss_pred CCCCEEEEEEecCCCceEEEEECCCCcE--EEeecCCCCccccceECCCCCEEEEEEcC-CcEEEEECCCCCcEEEEe
Confidence 345565555432 4799999998874 333322211111 211 245556665554 589999999998654333
No 267
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=84.21 E-value=60 Score=36.53 Aligned_cols=146 Identities=13% Similarity=0.098 Sum_probs=71.4
Q ss_pred EEEEEEccCCeEEEEeCCCCcEe-----------EEEeccCccccCCceeccccccccCCCeEEEE-eCCEEEEEECCCC
Q 003791 97 YVITLSSDGSTLRAWNLPDGQMV-----------WESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDG 164 (795)
Q Consensus 97 ~~V~Vs~~g~~v~A~d~~tG~ll-----------We~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG 164 (795)
+.+..++.++.|+.||..+|... -....... ....+ ....++.++.. .||.+...|..+|
T Consensus 226 ~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~----~v~sv----~~s~~~~lasgs~DgtV~lWD~~~~ 297 (524)
T 2j04_B 226 GCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADS----LITTF----DFLSPTTVVCGFKNGFVAEFDLTDP 297 (524)
T ss_dssp CEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTT----CEEEE----EESSSSEEEEEETTSEEEEEETTBC
T ss_pred ceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCC----CEEEE----EecCCCeEEEEeCCCEEEEEECCCC
Confidence 34544555679999999988532 11111111 11111 11123444444 3899999999887
Q ss_pred c-EEEEEeccCcceeeeeEEEE-ecCC-EEEEEEecCCceeEEEEEEcCCCceeeeeeeeccC-CcccceEEe-cCcEEE
Q 003791 165 E-ILWTRDFAAESVEVQQVIQL-DESD-QIYVVGYAGSSQFHAYQINAMNGELLNHETAAFSG-GFVGDVALV-SSDTLV 239 (795)
Q Consensus 165 ~-~~W~~~~~~~~~~~~~vv~s-~~~~-~Vyvv~~~g~~~~~v~ald~~tG~~~w~~~v~~~~-~~~~~~~~v-g~~~lv 239 (795)
. +.......... ...+... ..++ .+++.+...+ .+...|..+|+......-..+. .+. .+.+- ....++
T Consensus 298 ~~~~~~~~~H~~~--V~sv~~~~s~~g~~~laS~S~D~---tvklWD~~~~~~~~~~~~~~~~~~v~-~v~fsp~~~~l~ 371 (524)
T 2j04_B 298 EVPSFYDQVHDSY--ILSVSTAYSDFEDTVVSTVAVDG---YFYIFNPKDIATTKTTVSRFRGSNLV-PVVYCPQIYSYI 371 (524)
T ss_dssp SSCSEEEECSSSC--EEEEEEECCTTSCCEEEEEETTS---EEEEECGGGHHHHCEEEEECSCCSCC-CEEEETTTTEEE
T ss_pred CCceEEeeccccc--EEEEEEEcCCCCCeEEEEeccCC---eEEEEECCCCCcccccccccccCccc-ceEeCCCcCeEE
Confidence 4 33333332222 1122101 1223 4544443332 6788898888765433211111 121 22232 234555
Q ss_pred EEECCCCeEEEEEeecCe
Q 003791 240 TLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 240 ~~d~~~~~L~v~~l~sg~ 257 (795)
+.+ ..+.+.+-|+.++.
T Consensus 372 s~~-~d~tv~lwd~~~~~ 388 (524)
T 2j04_B 372 YSD-GASSLRAVPSRAAF 388 (524)
T ss_dssp EEC-SSSEEEEEETTCTT
T ss_pred EeC-CCCcEEEEECcccc
Confidence 554 34678888887765
No 268
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=84.07 E-value=16 Score=41.95 Aligned_cols=150 Identities=8% Similarity=0.048 Sum_probs=80.5
Q ss_pred ccCCCEEEEEeCCCEEEEEECcCCccceEEEcCCcc-----eeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcE------
Q 003791 50 KTGRKRVVVSTEENVIASLDLRHGEIFWRHVLGIND-----VVDGIDIALGKYVITLSSDGSTLRAWNLPDGQM------ 118 (795)
Q Consensus 50 ~~~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~-----~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~l------ 118 (795)
++++..+.+++.+|.+...|.++ .+.. ++... .+..+....++..++.++.+++|+.||+.+|.+
T Consensus 94 SPdG~~LAs~s~dg~V~iwd~~~---~l~~-l~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i 169 (588)
T 2j04_A 94 SPIDDWMAVLSNNGNVSVFKDNK---MLTN-LDSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFY 169 (588)
T ss_dssp CSSSSCEEEEETTSCEEEEETTE---EEEE-CCCSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCE
T ss_pred CCCCCEEEEEeCCCcEEEEeCCc---eeee-ccCCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccce
Confidence 45677799999999999998433 5554 22221 244443334566777677788999999999863
Q ss_pred -eEEEeccCccccCCceeccccccccCCCeEEEE-eCCEEEEEECCCCcE--EEEEeccCcceeeeeEEEEecCCEEEEE
Q 003791 119 -VWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEI--LWTRDFAAESVEVQQVIQLDESDQIYVV 194 (795)
Q Consensus 119 -lWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~--~W~~~~~~~~~~~~~vv~s~~~~~Vyvv 194 (795)
+-......+.... .+... ....++ +++. .|+.++..|..+++. .|..-.+........+..+ + ...+.
T Consensus 170 ~l~ti~~~~~gh~~--~V~sV--awSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g-~~LAS 241 (588)
T 2j04_A 170 FESSIRLSDAGSKD--WVTHI--VWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--D-YKVVL 241 (588)
T ss_dssp EEEEEECSCTTCCC--CEEEE--EEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--T-TEEEE
T ss_pred eeeeeecccccccc--cEEEE--EEcCCc-EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--C-CEEEE
Confidence 3333322211100 11110 122234 4343 478888888777763 2332111111112233222 3 34444
Q ss_pred EecCCceeEEEEEEcCCCcee
Q 003791 195 GYAGSSQFHAYQINAMNGELL 215 (795)
Q Consensus 195 ~~~g~~~~~v~ald~~tG~~~ 215 (795)
+..+ .+...|..+|+..
T Consensus 242 a~~~----tIkLWd~~~~~~~ 258 (588)
T 2j04_A 242 TCPG----YVHKIDLKNYSIS 258 (588)
T ss_dssp ECSS----EEEEEETTTTEEE
T ss_pred EeCC----eEEEEECCCCeEE
Confidence 4333 6788888887773
No 269
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=83.20 E-value=16 Score=41.21 Aligned_cols=67 Identities=12% Similarity=-0.015 Sum_probs=42.6
Q ss_pred cCCCEEEEEeCC----CEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCC--eEEEEeCCCCcEe
Q 003791 51 TGRKRVVVSTEE----NVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGS--TLRAWNLPDGQMV 119 (795)
Q Consensus 51 ~~~~~v~vat~~----g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~--~v~A~d~~tG~ll 119 (795)
++++.|+.++.+ +.|+.+|.++|+.. +.....+.+......-++..++.+..++ .|+.||..+|+..
T Consensus 159 pDG~~la~~~~~~~~~~~i~~~d~~~g~~~--~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 159 IRGDLIAGLGFFGGGRVSLFTSNLSSGGLR--VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp EETTEEEEEEEEETTEEEEEEEETTTCCCE--EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred CCCCEEEEEEEcCCCCeEEEEEcCCCCCce--EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 346667766655 67999999999864 4343333333322222344455454455 8999999999987
No 270
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=81.77 E-value=63 Score=35.03 Aligned_cols=121 Identities=12% Similarity=0.012 Sum_probs=66.0
Q ss_pred eEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccCCceeccccccccCCCeEEEE-eCCE
Q 003791 77 WRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGC 155 (795)
Q Consensus 77 WR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~-~~g~ 155 (795)
|...++. +..+.. ++..++++ .++.|+.||..+-...+......... . .+.+ - ...+++. .+|.
T Consensus 83 ~~~~lp~---V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v-~--~i~~-----~-~p~~av~~~dG~ 147 (388)
T 1xip_A 83 WEKEIPD---VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPV-F--QLKN-----V-NNTLVILNSVND 147 (388)
T ss_dssp EEEECTT---EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCE-E--EEEE-----C-SSEEEEEETTSE
T ss_pred EEeeCCC---eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccceeecce-e--eEEe-----c-CCCEEEEECCCC
Confidence 5555433 444422 55677777 56799999998777666554333222 1 1111 1 1224444 6999
Q ss_pred EEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcCCCceeeeeeeeccC
Q 003791 156 LHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHETAAFSG 224 (795)
Q Consensus 156 l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~tG~~~w~~~v~~~~ 224 (795)
|..+|.++|+.. ... .. .+++ ..++...++ +...+ .+..+++.+++...+..+..|.
T Consensus 148 L~v~dl~~~~~~---~~~-~~---Vs~v-~WSpkG~~v-g~~dg---~i~~~~~~~~~~~~k~~I~~Pp 204 (388)
T 1xip_A 148 LSALDLRTKSTK---QLA-QN---VTSF-DVTNSQLAV-LLKDR---SFQSFAWRNGEMEKQFEFSLPS 204 (388)
T ss_dssp EEEEETTTCCEE---EEE-ES---EEEE-EECSSEEEE-EETTS---CEEEEEEETTEEEEEEEECCCH
T ss_pred EEEEEccCCccc---ccc-CC---ceEE-EEcCCceEE-EEcCC---cEEEEcCCCccccccceecCCc
Confidence 999999998763 111 11 1222 234444444 44433 5777788777753344454443
No 271
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=81.47 E-value=85 Score=36.35 Aligned_cols=106 Identities=9% Similarity=0.066 Sum_probs=53.9
Q ss_pred CEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcCCCce-eeeeeeeccCCcccceEE
Q 003791 154 GCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGEL-LNHETAAFSGGFVGDVAL 232 (795)
Q Consensus 154 g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~tG~~-~w~~~v~~~~~~~~~~~~ 232 (795)
..++.+|..+|...|+.-.+...... ..+ ...++.+|+.+..++...+++.+|+.+|+. -|+.-+......- .. -
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~~~~~~~-~~~-~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~-~~-s 334 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQGDLDADV-SLV-DNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL-TV-H 334 (693)
T ss_dssp CEEEEEETTSTTCCCEEEECSSSSCE-EEE-EEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE-EE-E
T ss_pred cEEEEEECCCCCCceEEEeCCCCceE-EEE-eccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE-EE-E
Confidence 47888888777533332111111111 112 346788888776654456899999998875 3544222222221 11 1
Q ss_pred ecCcEEEEEECCCC--eEEEEEeecCeeeeEEEee
Q 003791 233 VSSDTLVTLDTTRS--ILVTVSFKNRKIAFQETHL 265 (795)
Q Consensus 233 vg~~~lv~~d~~~~--~L~v~~l~sg~~~~~~~~l 265 (795)
..++.++.....++ .+++.++..+. .+.+++
T Consensus 335 ~~g~~lv~~~~~~g~~~l~~~d~~g~~--~~~l~~ 367 (693)
T 3iuj_A 335 SGSGYLFAEYMVDATARVEQFDYEGKR--VREVAL 367 (693)
T ss_dssp EETTEEEEEEEETTEEEEEEECTTSCE--EEEECC
T ss_pred EECCEEEEEEEECCeeEEEEEECCCCe--eEEeec
Confidence 23344433322233 57777776544 444443
No 272
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=81.29 E-value=32 Score=40.40 Aligned_cols=151 Identities=11% Similarity=0.060 Sum_probs=79.9
Q ss_pred CCEEEEEeCCCEEEEEECcCCccceEEEcCCcc-----eeeeeeeeeCCEEEEEEccCCeEEEEeCCC------CcEe--
Q 003791 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGIND-----VVDGIDIALGKYVITLSSDGSTLRAWNLPD------GQMV-- 119 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~-----~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~t------G~ll-- 119 (795)
++.|+++|+ +-|..+|+++|+..--....... .+..+ ....++.+.+++.++.|..+|..+ +...
T Consensus 383 ~g~lWigt~-~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i-~~d~~g~lWigT~~~Gl~~~~~~~~~~~~~~~~~~~ 460 (758)
T 3ott_A 383 EQQLWIATD-GSINRYDYATRQFIHYNIVDNTGTYNTNWTYYI-FEDTAGQLWISTCLGGIFVVDKHKLMQSTSGQYIAE 460 (758)
T ss_dssp TSCEEEEET-TEEEEEETTTTEEEEEEEECCC--CBSSSEEEE-EECTTSEEEEEESSSCEEEEEHHHHHHCCSSEEECS
T ss_pred CCCEEEEeC-CcHhhcCcCCCcEEEeecCCCcCCCCCceEEEE-EEcCCCCEEEEECCCceEEEccccccccCCcceecc
Confidence 567999995 57999999998653221111111 12222 234566777777555688888753 2221
Q ss_pred EEEeccCccccCCceeccccccccCCCeEEE--EeCCEEEEEECCCCcEEEEEeccCc-ceeeeeEEEEecCCEEEEEEe
Q 003791 120 WESFLRGSKHSKPLLLVPTNLKVDKDSLILV--SSKGCLHAVSSIDGEILWTRDFAAE-SVEVQQVIQLDESDQIYVVGY 196 (795)
Q Consensus 120 We~~~~~~~~s~~~~~~~~~~~~~~~~~V~V--~~~g~l~ald~~tG~~~W~~~~~~~-~~~~~~vv~s~~~~~Vyvv~~ 196 (795)
+.+..... ++.. .+.. ...+.++.+.+ ...+.|.++|..+++..--...... ...+..+ .....+.+++.+
T Consensus 461 ~~~~~~~~-l~~~-~i~~--i~~d~~g~lWi~~~t~~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i-~~d~~g~lWigt- 534 (758)
T 3ott_A 461 QNYSVHNG-LSGM-FINQ--IIPDNEGNVWVLLYNNKGIDKINPRTREVTKLFADELTGEKSPNYL-LCDEDGLLWVGF- 534 (758)
T ss_dssp EEECGGGT-CSCS-CEEE--EEECTTSCEEEEETTCSSEEEEETTTTEEEEECTTTSCGGGCEEEE-EECTTSCEEEEE-
T ss_pred cccccccc-cccc-eeee--EEEcCCCCEEEEccCCCCcEEEeCCCCceEEecCCCcCCCcccceE-EECCCCCEEEEe-
Confidence 22222111 1011 1111 13455677887 4456699999999875532111111 1112222 234678899755
Q ss_pred cCCceeEEEEEEcCCCcee
Q 003791 197 AGSSQFHAYQINAMNGELL 215 (795)
Q Consensus 197 ~g~~~~~v~ald~~tG~~~ 215 (795)
.+ -+..+|+.+++..
T Consensus 535 ~~----Gl~~~~~~~~~~~ 549 (758)
T 3ott_A 535 HG----GVMRINPKDESQQ 549 (758)
T ss_dssp TT----EEEEECC--CCCC
T ss_pred cC----ceEEEecCCCceE
Confidence 34 3888999888653
No 273
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=81.06 E-value=63 Score=34.62 Aligned_cols=197 Identities=12% Similarity=0.209 Sum_probs=103.0
Q ss_pred CCEEEEEeCCCEEEEEECcCCccceEEEcCCcceee---eeeeeeCCE---EEEEEcc---CCeEEEE--eCCCCcEeEE
Q 003791 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVD---GIDIALGKY---VITLSSD---GSTLRAW--NLPDGQMVWE 121 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~---~l~~~~g~~---~V~Vs~~---g~~v~A~--d~~tG~llWe 121 (795)
...++....++-|+.+|. +|+++=+......-+++ ++ ..++. +++++.. .++|+.| |+.++. |+
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~g~~nnVD~r~~~--~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~--l~ 114 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYNTGKLNNVDIRYDF--PLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT--LQ 114 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEECCSCEEEEEEEEEE--EETTEEEEEEEEEECSTTCCEEEEEEECTTTCC--EE
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEccCCCcccEEEeccc--ccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc--ee
Confidence 344444445689999999 99998664332221222 22 22333 4565543 4678888 667776 44
Q ss_pred Eecc------Cc-cccCCceeccccccccCCC--eEEEE-eCCEEEEEEC---C----CCcEEEEEeccCcceeeeeEEE
Q 003791 122 SFLR------GS-KHSKPLLLVPTNLKVDKDS--LILVS-SKGCLHAVSS---I----DGEILWTRDFAAESVEVQQVIQ 184 (795)
Q Consensus 122 ~~~~------~~-~~s~~~~~~~~~~~~~~~~--~V~V~-~~g~l~ald~---~----tG~~~W~~~~~~~~~~~~~vv~ 184 (795)
.-.. .+ .....+++.- ... .+ .+||. .+|++.-++. . +++++.++..+. .++.|+.
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~---~~~-~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgs---q~Egcvv 187 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYH---SQK-TGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNS---QTEGMAA 187 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEE---CTT-TCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSS---CEEEEEE
T ss_pred eccccccCcCCCCCCeeEEEEEe---cCC-CCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCC---CcceEEE
Confidence 3311 11 0001222211 111 23 35665 3677766444 3 335667777764 2667753
Q ss_pred EecCCEEEEEEecCCceeEEEEEEcC--C---Cceeeeeeee-ccCCcccceEEec---CcEEEEEECCCCeEEEEEee-
Q 003791 185 LDESDQIYVVGYAGSSQFHAYQINAM--N---GELLNHETAA-FSGGFVGDVALVS---SDTLVTLDTTRSILVTVSFK- 254 (795)
Q Consensus 185 s~~~~~Vyvv~~~g~~~~~v~ald~~--t---G~~~w~~~v~-~~~~~~~~~~~vg---~~~lv~~d~~~~~L~v~~l~- 254 (795)
-...+.+|+. -... -+..+|+. + ++++...... +..++.+-.++.. .+++++.+..++++++.+.+
T Consensus 188 Dd~~g~Lyv~-eEd~---GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~ 263 (355)
T 3amr_A 188 DDEYGRLYIA-EEDE---AIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQG 263 (355)
T ss_dssp ETTTTEEEEE-ETTT---EEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESST
T ss_pred cCCCCeEEEe-cccc---eEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCC
Confidence 2346789974 3332 47888854 3 4455333111 1123333233322 24788888777889999986
Q ss_pred cCeeeeEEEeec
Q 003791 255 NRKIAFQETHLS 266 (795)
Q Consensus 255 sg~~~~~~~~l~ 266 (795)
+.+. +..+.+.
T Consensus 264 ~~~~-vg~f~Ig 274 (355)
T 3amr_A 264 KNKY-VADFRIT 274 (355)
T ss_dssp TCCE-EEEEEEC
T ss_pred CCcE-EEEEEec
Confidence 4442 4555543
No 274
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=81.05 E-value=46 Score=38.87 Aligned_cols=75 Identities=12% Similarity=0.119 Sum_probs=44.9
Q ss_pred cCCCEEEEEeC-----CCEEEEEECcCCccc-eEEEcCCcceeeeeeeeeCCEEEEEEcc---CCeEEEEeCCCCcEeEE
Q 003791 51 TGRKRVVVSTE-----ENVIASLDLRHGEIF-WRHVLGINDVVDGIDIALGKYVITLSSD---GSTLRAWNLPDGQMVWE 121 (795)
Q Consensus 51 ~~~~~v~vat~-----~g~l~ALn~~tG~iv-WR~~l~~~~~i~~l~~~~g~~~V~Vs~~---g~~v~A~d~~tG~llWe 121 (795)
++++.|++.+. .+.|+.+|+.+|+.. |+......+......-..++.+++.+.. ...|+.||..+|...|+
T Consensus 277 pDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~ 356 (741)
T 1yr2_A 277 SDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFD 356 (741)
T ss_dssp TTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEE
T ss_pred CCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccE
Confidence 33445666553 348999999988655 7776654432221111356666666543 35799999887633466
Q ss_pred Eecc
Q 003791 122 SFLR 125 (795)
Q Consensus 122 ~~~~ 125 (795)
.-+.
T Consensus 357 ~l~~ 360 (741)
T 1yr2_A 357 TVVP 360 (741)
T ss_dssp EEEC
T ss_pred EEec
Confidence 5543
No 275
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=80.86 E-value=70 Score=34.96 Aligned_cols=199 Identities=12% Similarity=0.133 Sum_probs=97.7
Q ss_pred CCEEEEEeCCC-----EEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEc-cCCeEEEEeCCCCcEeEEEeccC
Q 003791 53 RKRVVVSTEEN-----VIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSS-DGSTLRAWNLPDGQMVWESFLRG 126 (795)
Q Consensus 53 ~~~v~vat~~g-----~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~-~g~~v~A~d~~tG~llWe~~~~~ 126 (795)
++.||++...+ .+..+++..+ ..+...+.......++.+...++.+|++. .+++|+.+|+.+|...+......
T Consensus 192 dG~lyVad~~~~~~~~gv~~~~~~~~-~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~ 270 (433)
T 4hw6_A 192 NGDMVVVDDQSSDTNTGIYLFTRASG-FTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMD 270 (433)
T ss_dssp TCCEEEEECCSCTTSEEEEEECGGGT-TCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECS
T ss_pred CCCEEEEcCCCCcccceEEEEECCCC-eeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccC
Confidence 34488887633 4666666433 33333332111112332222256677764 45789999999998855543222
Q ss_pred ccccCCceeccccccccCCC-eEEEEe--CCEEEEEECC--CCcE----EEEEeccCc----------ce-eeeeEEEE-
Q 003791 127 SKHSKPLLLVPTNLKVDKDS-LILVSS--KGCLHAVSSI--DGEI----LWTRDFAAE----------SV-EVQQVIQL- 185 (795)
Q Consensus 127 ~~~s~~~~~~~~~~~~~~~~-~V~V~~--~g~l~ald~~--tG~~----~W~~~~~~~----------~~-~~~~vv~s- 185 (795)
... ....+ ..+.++ .+++.. ++++++++.. +|.. .+.-..... .+ .|..+...
T Consensus 271 ~~~-~~~~i-----a~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~ 344 (433)
T 4hw6_A 271 TKG-SNFHI-----VWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVK 344 (433)
T ss_dssp CCS-SCEEE-----EECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEE
T ss_pred CCC-CcccE-----EEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEc
Confidence 110 11011 223334 477763 7899997744 4532 111110000 01 24444311
Q ss_pred -------ecCCEEEEEEecCCceeEEEEEEcCCCceeeeeeeec--cCC-----cccceEEecCcEEEEEECCCCeEEEE
Q 003791 186 -------DESDQIYVVGYAGSSQFHAYQINAMNGELLNHETAAF--SGG-----FVGDVALVSSDTLVTLDTTRSILVTV 251 (795)
Q Consensus 186 -------~~~~~Vyvv~~~g~~~~~v~ald~~tG~~~w~~~v~~--~~~-----~~~~~~~vg~~~lv~~d~~~~~L~v~ 251 (795)
...+.+|+....++ ++..+++ +|....-.-... ..+ .....-+ ....-+|+|+..|.|++.
T Consensus 345 n~~y~~dd~~g~lyvaD~~n~---~I~~~~~-~G~v~t~~G~g~~~~~G~~dG~~~~~~~~-~~P~giavd~~~g~lyVa 419 (433)
T 4hw6_A 345 NEAYAGEEDEYDFYFCDRDSH---TVRVLTP-EGRVTTYAGRGNSREWGYVDGELRSQALF-NHPTSIAYDMKRKCFYIG 419 (433)
T ss_dssp CGGGTTSSCCEEEEEEETTTT---EEEEECT-TSEEEEEECCCTTCSSCCBCEETTTTCBC-SSEEEEEEETTTTEEEEE
T ss_pred cccccccCCCCcEEEEECCCC---EEEEECC-CCCEEEEEeCCCCCccccCCCccccccEe-CCCcEEEEECCCCEEEEE
Confidence 35667887654433 6777785 775432211000 011 1000001 223446788567889998
Q ss_pred EeecCeeeeEEEee
Q 003791 252 SFKNRKIAFQETHL 265 (795)
Q Consensus 252 ~l~sg~~~~~~~~l 265 (795)
|..+.+ ++.+.+
T Consensus 420 D~~n~r--Ir~i~~ 431 (433)
T 4hw6_A 420 DCDNHR--VRKIAP 431 (433)
T ss_dssp EGGGTE--EEEEEE
T ss_pred eCCCCE--EEEEec
Confidence 888777 555554
No 276
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=80.49 E-value=13 Score=42.14 Aligned_cols=110 Identities=15% Similarity=0.132 Sum_probs=62.4
Q ss_pred CCEEEEEeCCCEEEEEECcCCccc-eEEEcCCcceeeeee--eeeCC-EEEEEEccCCeEEEEeCCCCcEeEEEeccCc-
Q 003791 53 RKRVVVSTEENVIASLDLRHGEIF-WRHVLGINDVVDGID--IALGK-YVITLSSDGSTLRAWNLPDGQMVWESFLRGS- 127 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~iv-WR~~l~~~~~i~~l~--~~~g~-~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~- 127 (795)
++.|++++.+|.|.-.|.++|+.. .....- ...+..+. ....+ .+++-++.+++++.||..+|+..=.......
T Consensus 277 ~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H-~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~ 355 (524)
T 2j04_B 277 PTTVVCGFKNGFVAEFDLTDPEVPSFYDQVH-DSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRG 355 (524)
T ss_dssp SSEEEEEETTSEEEEEETTBCSSCSEEEECS-SSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSC
T ss_pred CCeEEEEeCCCEEEEEECCCCCCceEEeecc-cccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccccccccc
Confidence 457999999999999999998543 222221 22243331 11122 3444355678999999999875433221111
Q ss_pred -cccCCceeccccccccCCCeEEE-E-eCCEEEEEECCCCcEEEEEe
Q 003791 128 -KHSKPLLLVPTNLKVDKDSLILV-S-SKGCLHAVSSIDGEILWTRD 171 (795)
Q Consensus 128 -~~s~~~~~~~~~~~~~~~~~V~V-~-~~g~l~ald~~tG~~~W~~~ 171 (795)
.+ ..+...| ++..++ . .++.+...|..+|....+..
T Consensus 356 ~~v-~~v~fsp-------~~~~l~s~~~d~tv~lwd~~~~~~~~~l~ 394 (524)
T 2j04_B 356 SNL-VPVVYCP-------QIYSYIYSDGASSLRAVPSRAAFAVHPLV 394 (524)
T ss_dssp CSC-CCEEEET-------TTTEEEEECSSSEEEEEETTCTTCCEEEE
T ss_pred Ccc-cceEeCC-------CcCeEEEeCCCCcEEEEECcccccceeee
Confidence 11 1122222 233334 3 37788888988887655543
No 277
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=80.49 E-value=66 Score=34.49 Aligned_cols=147 Identities=14% Similarity=0.086 Sum_probs=83.7
Q ss_pred cCCeEEEEeC-CCCcEeEEEeccCccccCCceeccccccccCCCeEEEE-e-CCEEEEEECCCCcEEEEEeccCcce-ee
Q 003791 104 DGSTLRAWNL-PDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-S-KGCLHAVSSIDGEILWTRDFAAESV-EV 179 (795)
Q Consensus 104 ~g~~v~A~d~-~tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~-~-~g~l~ald~~tG~~~W~~~~~~~~~-~~ 179 (795)
.++.|+.|+. .+|+.+=...+.++.. ....+. .+.+++..++. + |+.+.--|.++|+.+.+........ ..
T Consensus 155 ~d~~V~~~~~s~dG~~~~s~~~~~~~v-~~l~fs----~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v 229 (356)
T 2w18_A 155 SDQQVEVMTFAEDGGGKENQFLMPPEE-TILTFA----EVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASV 229 (356)
T ss_dssp TTCEEEEEEECTTSCEEEEEEECCCSS-CEEEEE----EEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCC
T ss_pred CCCcEEEEEECCCCceeeeeccCCCce-eeEEee----ccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeee
Confidence 4789999999 6799887777766543 111121 12335566665 3 9999999999999998886432111 01
Q ss_pred eeEEEEecCCEEEEEEe---------cCCceeEEEEEEcCCCceeeeeeeeccCCcccceEE--ecCcEEEEEECCCCeE
Q 003791 180 QQVIQLDESDQIYVVGY---------AGSSQFHAYQINAMNGELLNHETAAFSGGFVGDVAL--VSSDTLVTLDTTRSIL 248 (795)
Q Consensus 180 ~~vv~s~~~~~Vyvv~~---------~g~~~~~v~ald~~tG~~~w~~~v~~~~~~~~~~~~--vg~~~lv~~d~~~~~L 248 (795)
..+..+ .++..++.+. .|+....+...|+.+|+.+....+..|.+-.+..+- .++..+++.. ..+.+
T Consensus 230 ~~vafS-pdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS-~DgTI 307 (356)
T 2w18_A 230 CHKAYS-EMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAIL-TSGTI 307 (356)
T ss_dssp EEEEEE-ETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEE-TTSCE
T ss_pred EEEEEC-CCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEc-CCCcE
Confidence 111112 2344443221 122234566689999988765544444332222110 1223455554 35789
Q ss_pred EEEEeecCe
Q 003791 249 VTVSFKNRK 257 (795)
Q Consensus 249 ~v~~l~sg~ 257 (795)
++=|+.+|+
T Consensus 308 kIWDl~tGk 316 (356)
T 2w18_A 308 AIWDLLLGQ 316 (356)
T ss_dssp EEEETTTCS
T ss_pred EEEECCCCc
Confidence 999999987
No 278
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=80.08 E-value=79 Score=35.13 Aligned_cols=191 Identities=10% Similarity=0.007 Sum_probs=104.5
Q ss_pred CCCEEEEEeC-CCEEEEEECcCC--ccceEEEcCCc------c--eeeeeeeeeCCEEEEEEccC-------CeEEEEeC
Q 003791 52 GRKRVVVSTE-ENVIASLDLRHG--EIFWRHVLGIN------D--VVDGIDIALGKYVITLSSDG-------STLRAWNL 113 (795)
Q Consensus 52 ~~~~v~vat~-~g~l~ALn~~tG--~ivWR~~l~~~------~--~i~~l~~~~g~~~V~Vs~~g-------~~v~A~d~ 113 (795)
+++++|+... ++.|+.+|.++- ++.=....+.. + ...+++. ..++ ++|+..| +.+..+|.
T Consensus 94 ~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~-~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 94 ERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHC-GPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEE-CSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred cCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeE-CCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 3667888775 588999998643 22222223210 0 0011111 2333 5554322 58999999
Q ss_pred CCCcEeEEEeccCcc--ccCCceeccccccccCCCeEEEEe---------------------CCEEEEEECCCCcEEEEE
Q 003791 114 PDGQMVWESFLRGSK--HSKPLLLVPTNLKVDKDSLILVSS---------------------KGCLHAVSSIDGEILWTR 170 (795)
Q Consensus 114 ~tG~llWe~~~~~~~--~s~~~~~~~~~~~~~~~~~V~V~~---------------------~g~l~ald~~tG~~~W~~ 170 (795)
+|++++=++...... ...+...-+ ++.+++.+ +.+|+.+|..+|+++-+.
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p-------~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI 244 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNL-------PNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSL 244 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEET-------TTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEE
T ss_pred CCCeEEEEEccCCCCccccceEEECC-------CCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEE
Confidence 999988666644221 111122222 34455543 589999999999988888
Q ss_pred eccCcceeeeeEEE--EecCCEEEEEEe-----cCCceeEEEEEEcCCCceeeeeeeeccC------------------C
Q 003791 171 DFAAESVEVQQVIQ--LDESDQIYVVGY-----AGSSQFHAYQINAMNGELLNHETAAFSG------------------G 225 (795)
Q Consensus 171 ~~~~~~~~~~~vv~--s~~~~~Vyvv~~-----~g~~~~~v~ald~~tG~~~w~~~v~~~~------------------~ 225 (795)
..+.....|..+.. ...+..+|+.+- -. +.+.+...| .|+......+..+. .
T Consensus 245 ~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Ls-s~V~v~~~d--~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~ 321 (462)
T 2ece_A 245 TLGEENRMALELRPLHDPTKLMGFINMVVSLKDLS-SSIWLWFYE--DGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPP 321 (462)
T ss_dssp ESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCC-EEEEEEEEE--TTEEEEEEEEEECCEECCSSCCGGGGGGTEECC
T ss_pred ecCCCCCccceeEeeECCCCCEEEEEEeeeccCCC-ceEEEEEec--CCceeEEEEEeCCCccccccccccccccccCCC
Confidence 87633333444433 234667887664 32 233333334 45433222222211 1
Q ss_pred cccceEEe-cCcEEEEEECCCCeEEEEEee
Q 003791 226 FVGDVALV-SSDTLVTLDTTRSILVTVSFK 254 (795)
Q Consensus 226 ~~~~~~~v-g~~~lv~~d~~~~~L~v~~l~ 254 (795)
....+.+- ++..+++.+...+.+.+.++.
T Consensus 322 ~pa~I~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 322 LVTDIDISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp CCCCEEECTTSCEEEEEETTTTEEEEEECS
T ss_pred ceeEEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 11223332 456788888888899999885
No 279
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=78.79 E-value=60 Score=34.37 Aligned_cols=70 Identities=4% Similarity=-0.038 Sum_probs=40.9
Q ss_pred CCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeee-eCCEEEEEEccCCeEEEEeCCCCcEeEEEe
Q 003791 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIA-LGKYVITLSSDGSTLRAWNLPDGQMVWESF 123 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~-~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~ 123 (795)
+..|..+++++.|.--|.+++...-...--.. .+..+... .+...++.++.++.++.||..+|+...+..
T Consensus 156 ~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~-~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~ 226 (393)
T 4gq1_A 156 EQVIASVGDDCTLIIWRLTDEGPILAGYPLSS-PGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENS 226 (393)
T ss_dssp EEEEEEEETTSEEEEEEEETTEEEEEEEECSS-CEEEEEEETTEEEEEEEEETTSEEEEEETTCCC------
T ss_pred CCEEEEEECCCeEEEEECCCCceeeeecCCCC-CcEEEEECCCCCceEEecCCCCEEEEEECCCCccccccc
Confidence 34577788999999999888876544322111 22222112 233355556667899999999998876654
No 280
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=78.77 E-value=62 Score=33.17 Aligned_cols=65 Identities=8% Similarity=0.151 Sum_probs=34.3
Q ss_pred CCCEEEEEeCCCEEEEEECcCCcc---ceE--EEcCC-cceeeeeeeeeCCEEEEEEccCCeEEEEeCCCC
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEI---FWR--HVLGI-NDVVDGIDIALGKYVITLSSDGSTLRAWNLPDG 116 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~i---vWR--~~l~~-~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG 116 (795)
+++.+++++.++.|.-.|.+++.. .++ ..+.. ...+..+.....+..++.++.++.|+.||..++
T Consensus 69 ~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~ 139 (330)
T 2hes_X 69 HTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDES 139 (330)
T ss_dssp TSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTT
T ss_pred CCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCC
Confidence 456788899999998888754321 122 12221 122333322223344444555779999999544
No 281
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=76.91 E-value=97 Score=37.76 Aligned_cols=148 Identities=7% Similarity=-0.079 Sum_probs=76.1
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcCCcc-eeeeeeeeeCCEEEEEEccCCeEE-EEeCCCCcEeEEEeccCccc
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGIND-VVDGIDIALGKYVITLSSDGSTLR-AWNLPDGQMVWESFLRGSKH 129 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~-~i~~l~~~~g~~~V~Vs~~g~~v~-A~d~~tG~llWe~~~~~~~~ 129 (795)
+++.+++++ .+.|..+|..+|+.. +...... .+.......++.+++.+. ...++ .||..+|... .+.....
T Consensus 307 dG~~la~~~-~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~sdg~~l~~~s~-~~~l~~~~d~~~~~~~---~l~~~~~ 379 (1045)
T 1k32_A 307 DGDLIAFVS-RGQAFIQDVSGTYVL--KVPEPLRIRYVRRGGDTKVAFIHGTR-EGDFLGIYDYRTGKAE---KFEENLG 379 (1045)
T ss_dssp GGGCEEEEE-TTEEEEECTTSSBEE--ECSCCSCEEEEEECSSSEEEEEEEET-TEEEEEEEETTTCCEE---ECCCCCC
T ss_pred CCCEEEEEE-cCEEEEEcCCCCceE--EccCCCcceEEeeeEcCCCeEEEEEC-CCceEEEEECCCCCce---EecCCcc
Confidence 344465555 778888998888643 2222222 222222232223444444 56788 8999888653 2221111
Q ss_pred cCCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecC------Ccee
Q 003791 130 SKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAG------SSQF 202 (795)
Q Consensus 130 s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g------~~~~ 202 (795)
....+. ...+ ++.+++. .++.++.+|..+|+..-......... ..+..+.++..+...+..+ ....
T Consensus 380 --~~~~~~--~SpD-G~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v--~~~~~SpDG~~la~~~~~~~~~~~~~~~~ 452 (1045)
T 1k32_A 380 --NVFAMG--VDRN-GKFAVVANDRFEIMTVDLETGKPTVIERSREAMI--TDFTISDNSRFIAYGFPLKHGETDGYVMQ 452 (1045)
T ss_dssp --SEEEEE--ECTT-SSEEEEEETTSEEEEEETTTCCEEEEEECSSSCC--CCEEECTTSCEEEEEEEECSSTTCSCCEE
T ss_pred --ceeeeE--ECCC-CCEEEEECCCCeEEEEECCCCceEEeccCCCCCc--cceEECCCCCeEEEEecCccccccCCCCC
Confidence 111111 0122 2334444 47899999999999876653322221 1222233444454444332 2234
Q ss_pred EEEEEEcCCCc
Q 003791 203 HAYQINAMNGE 213 (795)
Q Consensus 203 ~v~ald~~tG~ 213 (795)
.+..+|+.+|+
T Consensus 453 ~i~l~d~~~g~ 463 (1045)
T 1k32_A 453 AIHVYDMEGRK 463 (1045)
T ss_dssp EEEEEETTTTE
T ss_pred eEEEEECCCCc
Confidence 67888999887
No 282
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=76.13 E-value=19 Score=37.04 Aligned_cols=66 Identities=15% Similarity=0.162 Sum_probs=43.0
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcCCc-ceeeeeeeee--CCEEEEEEccCCeEEEEeCCCCc
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIAL--GKYVITLSSDGSTLRAWNLPDGQ 117 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~-~~i~~l~~~~--g~~~V~Vs~~g~~v~A~d~~tG~ 117 (795)
+++.|++++.++.|.-.|.++|+..-.+.+... +.+..+.... .+..++.++.++.|+.||..+|.
T Consensus 24 ~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~ 92 (316)
T 3bg1_A 24 YGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGT 92 (316)
T ss_dssp GGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSC
T ss_pred CCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCc
Confidence 366799999999999999998875444444322 2344332211 13344435556799999999985
No 283
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=76.08 E-value=42 Score=40.99 Aligned_cols=104 Identities=12% Similarity=0.069 Sum_probs=57.7
Q ss_pred CCEEEEEeCCCEEE-EEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccC
Q 003791 53 RKRVVVSTEENVIA-SLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (795)
Q Consensus 53 ~~~v~vat~~g~l~-ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~ 131 (795)
++.++++++++.+. .+|..+|++. ........+..+...-++..++.++.++.++.||..+|++.-......... .
T Consensus 348 g~~l~~~s~~~~l~~~~d~~~~~~~--~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v-~ 424 (1045)
T 1k32_A 348 KVAFIHGTREGDFLGIYDYRTGKAE--KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMI-T 424 (1045)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEE--ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCC-C
T ss_pred CCeEEEEECCCceEEEEECCCCCce--EecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCc-c
Confidence 34577778888888 8898877642 222222222233222233344445555799999999999876553332221 1
Q ss_pred CceeccccccccCCCeEEEE-eC----------CEEEEEECCCCc
Q 003791 132 PLLLVPTNLKVDKDSLILVS-SK----------GCLHAVSSIDGE 165 (795)
Q Consensus 132 ~~~~~~~~~~~~~~~~V~V~-~~----------g~l~ald~~tG~ 165 (795)
.+.+.+ + ++.++.. .+ +.++..|..+|+
T Consensus 425 ~~~~Sp-----D-G~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 425 DFTISD-----N-SRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp CEEECT-----T-SCEEEEEEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred ceEECC-----C-CCeEEEEecCccccccCCCCCeEEEEECCCCc
Confidence 222222 2 2334333 22 378888888876
No 284
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=75.52 E-value=90 Score=33.31 Aligned_cols=182 Identities=8% Similarity=-0.007 Sum_probs=83.1
Q ss_pred CEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEc-cCCeEEEEeCCCCcEeEEEeccCccccCC
Q 003791 54 KRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSS-DGSTLRAWNLPDGQMVWESFLRGSKHSKP 132 (795)
Q Consensus 54 ~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~-~g~~v~A~d~~tG~llWe~~~~~~~~s~~ 132 (795)
..++++. .+.|..+++..++.. ..++......++.....++.+|++. .+++|+.+++..+... ..+..... .+
T Consensus 88 ~~l~~~~-~~~I~~i~~~~~~~~--~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~--~~~~~~~~-~p 161 (386)
T 3v65_B 88 PVLLFAN-RIDIRQVLPHRSEYT--LLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE--EVVSTGLE-SP 161 (386)
T ss_dssp CEEEEEC-BSCEEEECTTSCCCE--EEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEE--EEECSSCS-CC
T ss_pred ceeEeec-CccceeeccCCCcEE--EEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcE--EEEeCCCC-Cc
Confidence 3455554 466888888766542 2222222223342222445666654 4578999998766422 11111110 00
Q ss_pred ceecccccccc-CCCeEEEEe--CCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEc
Q 003791 133 LLLVPTNLKVD-KDSLILVSS--KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINA 209 (795)
Q Consensus 133 ~~~~~~~~~~~-~~~~V~V~~--~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~ 209 (795)
..+ +.+ ..+.+|+.. .+.+..++...+...-.... ....|..+.....++.+|+..... .-++..+++
T Consensus 162 ~gl-----avd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~--~l~~P~giavdp~~g~ly~td~~~--~~~I~r~~~ 232 (386)
T 3v65_B 162 GGL-----AVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQ--SLEKPRAIALHPMEGTIYWTDWGN--TPRIEASSM 232 (386)
T ss_dssp CCE-----EEETTTTEEEEEETTTTEEEECBTTSCSCEEEECS--SCSCEEEEEEETTTTEEEEEECSS--SCEEEEEET
T ss_pred cEE-----EEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecC--CCCCCcEEEEEcCCCeEEEeccCC--CCEEEEEeC
Confidence 001 222 145666653 56777777654332222111 111244443222467888754332 126777776
Q ss_pred CCCceeeeeeeeccCCccc--ceEEe-cCcEEEEEECCCCeEEEEEee
Q 003791 210 MNGELLNHETAAFSGGFVG--DVALV-SSDTLVTLDTTRSILVTVSFK 254 (795)
Q Consensus 210 ~tG~~~w~~~v~~~~~~~~--~~~~v-g~~~lv~~d~~~~~L~v~~l~ 254 (795)
. |...... ...++.. ...+- .++.++|+|..++.+.+.++.
T Consensus 233 d-G~~~~~~---~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~d 276 (386)
T 3v65_B 233 D-GSGRRII---ADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD 276 (386)
T ss_dssp T-SCSCEEE---ECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTT
T ss_pred C-CCCcEEE---EECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence 4 4322211 1111211 12221 244566666666666666654
No 285
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=75.41 E-value=63 Score=37.48 Aligned_cols=74 Identities=15% Similarity=0.138 Sum_probs=45.5
Q ss_pred CCCEEEEEeC----CCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEcc---CCeEEEEeCCCCcE-eEEEe
Q 003791 52 GRKRVVVSTE----ENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSD---GSTLRAWNLPDGQM-VWESF 123 (795)
Q Consensus 52 ~~~~v~vat~----~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~---g~~v~A~d~~tG~l-lWe~~ 123 (795)
+++.|++.+. .+.|+-+|+.+|+..|+......+......-..++.+++++.. ..+|+.+|..+|.. .|+.-
T Consensus 244 Dg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l 323 (693)
T 3iuj_A 244 DDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDL 323 (693)
T ss_dssp TSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEE
T ss_pred CCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEE
Confidence 3444544432 3589999998887677766544432221111356667776653 26899999998864 67754
Q ss_pred cc
Q 003791 124 LR 125 (795)
Q Consensus 124 ~~ 125 (795)
..
T Consensus 324 ~~ 325 (693)
T 3iuj_A 324 IP 325 (693)
T ss_dssp EC
T ss_pred ec
Confidence 33
No 286
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=74.16 E-value=29 Score=40.02 Aligned_cols=65 Identities=14% Similarity=0.143 Sum_probs=42.3
Q ss_pred cCCCEEEEEeC---------CCEEEEEECcCCccceEEEcCCcceeeeeee-eeCCEEEEEEccCCeEEEEeCCCCcEe
Q 003791 51 TGRKRVVVSTE---------ENVIASLDLRHGEIFWRHVLGINDVVDGIDI-ALGKYVITLSSDGSTLRAWNLPDGQMV 119 (795)
Q Consensus 51 ~~~~~v~vat~---------~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~-~~g~~~V~Vs~~g~~v~A~d~~tG~ll 119 (795)
++++.|++++. ++.|...|.++|+.+....+... +..... +.|+.+++++ ++.|+.||..+|+..
T Consensus 69 pDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~~--~~~~~~SPDG~~la~~~--~~~i~~~~~~~g~~~ 143 (719)
T 1z68_A 69 PDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRP--IQYLCWSPVGSKLAYVY--QNNIYLKQRPGDPPF 143 (719)
T ss_dssp TTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCSS--BCCEEECSSTTCEEEEE--TTEEEEESSTTSCCE
T ss_pred CCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecCcc--cccceECCCCCEEEEEE--CCeEEEEeCCCCCcE
Confidence 45666777765 68999999999987533334322 221211 3566666654 458999999999864
No 287
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=73.61 E-value=94 Score=32.69 Aligned_cols=61 Identities=7% Similarity=0.049 Sum_probs=35.8
Q ss_pred CCEEEEEeCCCEEEEEECcCCccceEEE--cC---C-cceeeeeeeeeC---CEEEEEEccC------CeEEEEeCCCCc
Q 003791 53 RKRVVVSTEENVIASLDLRHGEIFWRHV--LG---I-NDVVDGIDIALG---KYVITLSSDG------STLRAWNLPDGQ 117 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~ivWR~~--l~---~-~~~i~~l~~~~g---~~~V~Vs~~g------~~v~A~d~~tG~ 117 (795)
++++||+...|.|..++ +|+. +.. ++ . .....++.+..+ ++.+||+... ..|..++..+++
T Consensus 41 dG~l~V~e~~g~I~~i~--~g~~--~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~ 116 (352)
T 2ism_A 41 DGGMLIAERPGRIRLFR--EGRL--STYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGER 116 (352)
T ss_dssp TSCEEEEETTTEEEEEE--TTEE--EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSC
T ss_pred CCeEEEEeCCCeEEEEE--CCCc--cEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCC
Confidence 66799999999999999 6752 211 11 1 111223322222 3577775431 578889887653
No 288
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=72.65 E-value=94 Score=32.26 Aligned_cols=187 Identities=11% Similarity=-0.019 Sum_probs=92.0
Q ss_pred CCEEEEEeC-CCEEEEEECcCCcc-ceEEEcCCcceeeeeeeeeCCEEEEEEc-cCCeEEEEeCCCCcEeEEEeccCccc
Q 003791 53 RKRVVVSTE-ENVIASLDLRHGEI-FWRHVLGINDVVDGIDIALGKYVITLSS-DGSTLRAWNLPDGQMVWESFLRGSKH 129 (795)
Q Consensus 53 ~~~v~vat~-~g~l~ALn~~tG~i-vWR~~l~~~~~i~~l~~~~g~~~V~Vs~-~g~~v~A~d~~tG~llWe~~~~~~~~ 129 (795)
+++||+++- .+.|..+++..+.. .+-.... -....++.+.-.++.+|++. ..+.+..+++.......-. . ..+
T Consensus 46 ~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~-l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~--~-~~~ 121 (318)
T 3sov_A 46 HGLIYWSDVSEEAIKRTEFNKTESVQNVVVSG-LLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLF--W-QEL 121 (318)
T ss_dssp GTEEEEEETTTTEEEEEETTSSSCCCEEEEEC-CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE--C-SSC
T ss_pred CCEEEEEECCCCcEEEEEccCCCceEEEEcCC-CCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEE--e-CCC
Confidence 567888874 57888888876642 2221111 01122442221244555553 3468888887533222111 1 111
Q ss_pred cCCceecccccccc-CCCeEEEEe---CCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEE
Q 003791 130 SKPLLLVPTNLKVD-KDSLILVSS---KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAY 205 (795)
Q Consensus 130 s~~~~~~~~~~~~~-~~~~V~V~~---~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ 205 (795)
..+.- .+.+ ..+.+|+.. .+.|++++.. |..+-..-... -..|..+.....++.+|+.....+ ++.
T Consensus 122 -~~P~g----iavdp~~g~ly~td~~~~~~I~r~~~d-G~~~~~~~~~~-l~~Pnglavd~~~~~lY~aD~~~~---~I~ 191 (318)
T 3sov_A 122 -DQPRA----IALDPSSGFMYWTDWGEVPKIERAGMD-GSSRFIIINSE-IYWPNGLTLDYEEQKLYWADAKLN---FIH 191 (318)
T ss_dssp -SSEEE----EEEEGGGTEEEEEECSSSCEEEEEETT-SCSCEEEECSS-CSCEEEEEEETTTTEEEEEETTTT---EEE
T ss_pred -CCccE----EEEeCCCCEEEEEecCCCCEEEEEEcC-CCCeEEEEECC-CCCccEEEEeccCCEEEEEECCCC---EEE
Confidence 01111 1222 146677753 4688888853 43322221111 112334432235788998654433 678
Q ss_pred EEEcCCCceeeeeeeeccCCcccc-eEEecCcEEEEEECCCCeEEEEEeecCe
Q 003791 206 QINAMNGELLNHETAAFSGGFVGD-VALVSSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 206 ald~~tG~~~w~~~v~~~~~~~~~-~~~vg~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
.+|.. |...... . ...+..+ -+-+.++.++|+|..++.+...+..+|+
T Consensus 192 ~~d~d-G~~~~~~--~-~~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 192 KSNLD-GTNRQAV--V-KGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGE 240 (318)
T ss_dssp EEETT-SCSCEEE--E-CSCCSCEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred EEcCC-CCceEEE--e-cCCCCCceEEEEeCCEEEEEecCCCeEEEEECCCCC
Confidence 88875 4322111 1 1112111 1112456777889888888888887776
No 289
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=72.20 E-value=1.3e+02 Score=33.70 Aligned_cols=151 Identities=12% Similarity=0.131 Sum_probs=76.1
Q ss_pred CCEEEEEeCC-CEEEEEECcCCccceEEEcCCcc--eeeeeee-------eeCCEEEEEEccCC-------eEEEEeCCC
Q 003791 53 RKRVVVSTEE-NVIASLDLRHGEIFWRHVLGIND--VVDGIDI-------ALGKYVITLSSDGS-------TLRAWNLPD 115 (795)
Q Consensus 53 ~~~v~vat~~-g~l~ALn~~tG~ivWR~~l~~~~--~i~~l~~-------~~g~~~V~Vs~~g~-------~v~A~d~~t 115 (795)
.+.||++.+. +.|..+|++++.+.=-....... ....+.. ...++.++++...+ .+..++...
T Consensus 151 ~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~ 230 (496)
T 3kya_A 151 KDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNA 230 (496)
T ss_dssp EEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCT
T ss_pred CCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCC
Confidence 4668888775 67888999888765222221110 1222322 22444566665432 377776554
Q ss_pred -CcEeE----EEeccCccccCCceeccccccccC-CCeEEEE--eCCEEEEEECC-------CCcEEEE-----------
Q 003791 116 -GQMVW----ESFLRGSKHSKPLLLVPTNLKVDK-DSLILVS--SKGCLHAVSSI-------DGEILWT----------- 169 (795)
Q Consensus 116 -G~llW----e~~~~~~~~s~~~~~~~~~~~~~~-~~~V~V~--~~g~l~ald~~-------tG~~~W~----------- 169 (795)
|...+ . .+.... ....+ ..+. ++.+|+. .++.|+++|.+ +|.. |+
T Consensus 231 ~G~~~~~~~~~-~v~~~~--~p~gi-----avdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~-~tp~~~~~~g~~~ 301 (496)
T 3kya_A 231 DGTFDDRSDIQ-LIAAYK--QCNGA-----TIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGS-WDPIVKNNPNTFK 301 (496)
T ss_dssp TSCCSTTSCEE-EEEEES--CCCCE-----EECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCC-CCCBGGGCTTTEE
T ss_pred CCceeecccce-eeccCC--CceEE-----EEcCCCCeEEEEECCCCEEEEEecccccccccCcee-ecccccccccccc
Confidence 55432 1 111111 01111 2222 4677775 48899999998 6653 21
Q ss_pred --EeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcCCCce
Q 003791 170 --RDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGEL 214 (795)
Q Consensus 170 --~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~tG~~ 214 (795)
+..+.... +..+.....++.+|+.. .+...+..+.+|..+|..
T Consensus 302 ~l~~~~~~~~-p~~ia~~p~G~~lYvaD-~~~h~I~kid~dg~~~~~ 346 (496)
T 3kya_A 302 QLFTIADPSW-EFQIFIHPTGKYAYFGV-INNHYFMRSDYDEIKKEF 346 (496)
T ss_dssp EEEECSSSSC-CEEEEECTTSSEEEEEE-TTTTEEEEEEEETTTTEE
T ss_pred eeEecCCCCC-ceEEEEcCCCCEEEEEe-CCCCEEEEEecCCCccee
Confidence 22222222 34443333445578754 443444445566666654
No 290
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=72.13 E-value=94 Score=32.00 Aligned_cols=189 Identities=12% Similarity=-0.003 Sum_probs=92.9
Q ss_pred CCEEEEEeC-CCEEEEEECcC---CccceEEEcCCc-ceeeeeeeeeCCEEEEEE-ccCCeEEEEeCCCCcEeEEEeccC
Q 003791 53 RKRVVVSTE-ENVIASLDLRH---GEIFWRHVLGIN-DVVDGIDIALGKYVITLS-SDGSTLRAWNLPDGQMVWESFLRG 126 (795)
Q Consensus 53 ~~~v~vat~-~g~l~ALn~~t---G~ivWR~~l~~~-~~i~~l~~~~g~~~V~Vs-~~g~~v~A~d~~tG~llWe~~~~~ 126 (795)
+++||+++. .+.|..+|+.+ |.. -+..++.. ....++.+.-.++.+|++ ...+.|..+|........-...
T Consensus 41 ~~~ly~~D~~~~~I~~~~~~g~~~~~~-~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~-- 117 (316)
T 1ijq_A 41 SNRIYWSDLSQRMICSTQLDRAHGVSS-YDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE-- 117 (316)
T ss_dssp TTEEEEEETTTTEEEEEEC---------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEEC--
T ss_pred CCEEEEEECCCCcEEEEECCCCCCCcc-cEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEEC--
Confidence 678999876 48999999875 221 12222221 112344222124455555 3456899998753332211111
Q ss_pred ccccCCceecccccccc-CCCeEEEEe--C-CEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCcee
Q 003791 127 SKHSKPLLLVPTNLKVD-KDSLILVSS--K-GCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQF 202 (795)
Q Consensus 127 ~~~s~~~~~~~~~~~~~-~~~~V~V~~--~-g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~ 202 (795)
.+ ..+.- .+.+ .++.+|+.. . +.|++++. +|..+=..-...- ..|..+.....++.+|+.....+
T Consensus 118 -~~-~~P~~----iavdp~~g~ly~~d~~~~~~I~~~~~-dG~~~~~~~~~~~-~~P~gla~d~~~~~lY~~D~~~~--- 186 (316)
T 1ijq_A 118 -NG-SKPRA----IVVDPVHGFMYWTDWGTPAKIKKGGL-NGVDIYSLVTENI-QWPNGITLDLLSGRLYWVDSKLH--- 186 (316)
T ss_dssp -TT-CCEEE----EEEETTTTEEEEEECSSSCEEEEEET-TSCCEEEEECSSC-SCEEEEEEETTTTEEEEEETTTT---
T ss_pred -CC-CCcce----EEeCCCCCEEEEEccCCCCeEEEEcC-CCCCeEEEEECCC-CCceEEEEeccCCEEEEEECCCC---
Confidence 11 00111 1233 256777763 2 68888885 4543322211111 12444432235788998654433
Q ss_pred EEEEEEcCCCceeeeeeeeccCCcccc-eEEecCcEEEEEECCCCeEEEEEeecCe
Q 003791 203 HAYQINAMNGELLNHETAAFSGGFVGD-VALVSSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 203 ~v~ald~~tG~~~w~~~v~~~~~~~~~-~~~vg~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
++..+|.. |..+... +.....+... -+-+.++.++|+|..++.+...+..+|+
T Consensus 187 ~I~~~d~d-g~~~~~~-~~~~~~~~~P~giav~~~~ly~~d~~~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 187 SISSIDVN-GGNRKTI-LEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGS 240 (316)
T ss_dssp EEEEEETT-SCSCEEE-EECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred eEEEEecC-CCceEEE-eecCCccCCcEEEEEECCEEEEEECCCCeEEEEeCCCCc
Confidence 68888875 4322211 1111112211 1122457778888888888888876665
No 291
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=71.16 E-value=1.5e+02 Score=34.02 Aligned_cols=154 Identities=14% Similarity=0.055 Sum_probs=72.4
Q ss_pred cCCCEEE-EEeCC----CEEEEEECcCCccc-eEEEcCCcceeeeeee-eeCCEEEEEEccC------------CeEEEE
Q 003791 51 TGRKRVV-VSTEE----NVIASLDLRHGEIF-WRHVLGINDVVDGIDI-ALGKYVITLSSDG------------STLRAW 111 (795)
Q Consensus 51 ~~~~~v~-vat~~----g~l~ALn~~tG~iv-WR~~l~~~~~i~~l~~-~~g~~~V~Vs~~g------------~~v~A~ 111 (795)
+++++|. ..+.. ..|.-+|.++|+.+ =. .++.. ......- ..|+.+++.+.++ ..|+.|
T Consensus 130 PDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~~-~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~ 207 (695)
T 2bkl_A 130 WDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVD-VIEGG-KYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYH 207 (695)
T ss_dssp TTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSC-CBSCC-TTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEE
T ss_pred CCCCEEEEEECCCCCceEEEEEEECCCCCCcCCc-ccCcc-cccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEE
Confidence 4455544 33333 58999999999864 11 11111 0011111 2455566655422 239999
Q ss_pred eCCCCc----EeEEEeccCccccCCceeccccccccCCCeEEEE-eCC----EEEEEECCCCcEEEEEeccCcceeeeeE
Q 003791 112 NLPDGQ----MVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKG----CLHAVSSIDGEILWTRDFAAESVEVQQV 182 (795)
Q Consensus 112 d~~tG~----llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~-~~g----~l~ald~~tG~~~W~~~~~~~~~~~~~v 182 (795)
+..+|. ++++..-..... ..... ..+ ++.+++. .++ .|+.++..+|+.+--....... ...
T Consensus 208 ~l~t~~~~~~lv~~~~~~~~~~-~~~~~-----SpD-G~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~---~~~ 277 (695)
T 2bkl_A 208 TLGTEPSKDTVVHERTGDPTTF-LQSDL-----SRD-GKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAK---YEV 277 (695)
T ss_dssp ETTSCGGGCEEEECCCCCTTCE-EEEEE-----CTT-SCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCC---EEE
T ss_pred ECCCCchhceEEEecCCCCEEE-EEEEE-----CCC-CCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCce---EEE
Confidence 998886 444332111110 01111 122 2333333 333 6777766666533222111111 112
Q ss_pred EEEecCCEEEEEEecCCceeEEEEEEcCCCce-eeee
Q 003791 183 IQLDESDQIYVVGYAGSSQFHAYQINAMNGEL-LNHE 218 (795)
Q Consensus 183 v~s~~~~~Vyvv~~~g~~~~~v~ald~~tG~~-~w~~ 218 (795)
+ ...++ +|+.+..+....+++.+|+.+|+. .|+.
T Consensus 278 ~-~~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~ 312 (695)
T 2bkl_A 278 H-AWKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKE 312 (695)
T ss_dssp E-EETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEE
T ss_pred E-ecCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeE
Confidence 2 12344 666554332345899999988864 2444
No 292
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=71.03 E-value=1.2e+02 Score=32.80 Aligned_cols=113 Identities=12% Similarity=0.021 Sum_probs=57.1
Q ss_pred CCEEEEE---Ec-cCCeEEEEeCCCC--------cEeEEEeccCccccCCceeccccccccCCCeEEEE-eCCEEEEEEC
Q 003791 95 GKYVITL---SS-DGSTLRAWNLPDG--------QMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSS 161 (795)
Q Consensus 95 g~~~V~V---s~-~g~~v~A~d~~tG--------~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~ 161 (795)
.+..+++ ++ .++.|+.||..++ +.+.......... .....+.. .......++.. .+|.|...|.
T Consensus 103 dg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~-~~V~~v~~--~p~~~~~las~s~Dg~v~iwD~ 179 (434)
T 2oit_A 103 DNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAG-GMVIDMKW--NPTVPSMVAVCLADGSIAVLQV 179 (434)
T ss_dssp TSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGG-GSEEEEEE--CSSCTTEEEEEETTSCEEEEEE
T ss_pred CCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCC-CceEEEEE--CCCCCCEEEEEECCCeEEEEEc
Confidence 3445554 43 4679999999877 4444444321110 11111110 11112333334 4899999999
Q ss_pred CCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcCCCceeee
Q 003791 162 IDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNH 217 (795)
Q Consensus 162 ~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~tG~~~w~ 217 (795)
.+|............ +..+..+..+..+++.+.+| .+..+|.. |+....
T Consensus 180 ~~~~~~~~~~~~~~~--v~~v~wspdg~~lasgs~dg----~v~iwd~~-~~~~~~ 228 (434)
T 2oit_A 180 TETVKVCATLPSTVA--VTSVCWSPKGKQLAVGKQNG----TVVQYLPT-LQEKKV 228 (434)
T ss_dssp SSSEEEEEEECGGGC--EEEEEECTTSSCEEEEETTS----CEEEECTT-CCEEEE
T ss_pred CCCcceeeccCCCCc--eeEEEEcCCCCEEEEEcCCC----cEEEEccC-Cccccc
Confidence 998665544321111 22232233444555544444 57788887 665433
No 293
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=70.63 E-value=42 Score=39.37 Aligned_cols=187 Identities=12% Similarity=0.019 Sum_probs=86.1
Q ss_pred CCEEEEEeC-CCEEEEEECcC----CccceEEEcCCc-ceeeeeeeeeCCEEEEEEc-cCCeEEEEeCCCCcEeEEEecc
Q 003791 53 RKRVVVSTE-ENVIASLDLRH----GEIFWRHVLGIN-DVVDGIDIALGKYVITLSS-DGSTLRAWNLPDGQMVWESFLR 125 (795)
Q Consensus 53 ~~~v~vat~-~g~l~ALn~~t----G~ivWR~~l~~~-~~i~~l~~~~g~~~V~Vs~-~g~~v~A~d~~tG~llWe~~~~ 125 (795)
.++||++.. .+.|..+++.+ .... ..+... ....++.+...++.+|++. ..+.|+.+++..+....-....
T Consensus 417 ~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~--~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~ 494 (699)
T 1n7d_A 417 SNRIYWSDLSQRMICSTQLDRAHGVSSYD--TVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQ 494 (699)
T ss_dssp TTEEEECCTTTTSBEEEESCCCCC-CCCC--CBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCS
T ss_pred cCeEEEEecCCCeEEEEecCCCCCCcceE--EEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCC
Confidence 567887764 46777777754 1110 011111 0112332221334556553 3467888887644332211111
Q ss_pred CccccCCceeccccccccC-CCeEEEEe---CCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCce
Q 003791 126 GSKHSKPLLLVPTNLKVDK-DSLILVSS---KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQ 201 (795)
Q Consensus 126 ~~~~s~~~~~~~~~~~~~~-~~~V~V~~---~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~ 201 (795)
.....++ +++. .+.+|+.. .+.|++++.. |..+=..-... -..|..+.....++.+|+......
T Consensus 495 -~~~P~gi-------avDp~~g~ly~td~~~~~~I~~~~~d-G~~~~~l~~~~-l~~PnGlavd~~~~~LY~aD~~~~-- 562 (699)
T 1n7d_A 495 -GSKPRAI-------VVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTEN-IQWPNGITLDLLSGRLYWVDSKLH-- 562 (699)
T ss_dssp -SCCCCCE-------ECCSSSSCCEECCCSSSCCEEBCCSS-SCCCCEESCSS-CSSCCCEEECTTTCCEEEEETTTT--
T ss_pred -CCCcceE-------EEccCCCcEEEcccCCCCeEEEEeCC-CCCeeEEEeCC-CCCccEEEEeccCCEEEEEecCCC--
Confidence 0000111 2221 35566642 2677777643 32211110000 011333432224678888654333
Q ss_pred eEEEEEEcCCCceeeeeeeeccCCccc--ceEEecCcEEEEEECCCCeEEEEEeecCe
Q 003791 202 FHAYQINAMNGELLNHETAAFSGGFVG--DVALVSSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 202 ~~v~ald~~tG~~~w~~~v~~~~~~~~--~~~~vg~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
+|..+|.. |..+... +..+..+.. ... +..+.++|+|..++.+.+++..+|+
T Consensus 563 -~I~~~d~d-G~~~~~~-~~~~~~~~~P~gla-vd~~~lywtd~~~~~V~~~d~~~G~ 616 (699)
T 1n7d_A 563 -SISSIDVN-GGNRKTI-LEDEKRLAHPFSLA-VFEDKVFWTDIINEAIFSANRLTGS 616 (699)
T ss_dssp -EEEEECSS-SSCCEEE-CCCSSSCSSCCCCE-EETTEEEEECSTTTCEEEEETTTEE
T ss_pred -eEEEEccC-CCceEEE-EecCCcCCCceEeE-EECCEEEEEeCCCCeEEEEEccCCC
Confidence 67778875 3222111 111111111 222 2456788999888899999887776
No 294
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=70.31 E-value=1.8e+02 Score=34.55 Aligned_cols=183 Identities=10% Similarity=0.060 Sum_probs=78.9
Q ss_pred EEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEc-cCCeEEEEeCCCCcE--eEEEeccCccccC
Q 003791 55 RVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSS-DGSTLRAWNLPDGQM--VWESFLRGSKHSK 131 (795)
Q Consensus 55 ~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~-~g~~v~A~d~~tG~l--lWe~~~~~~~~s~ 131 (795)
.++++.. ..|..++...++. ...........++.+...++.||++. ..++|+.+++..... .++..+... + .
T Consensus 397 ~Ll~an~-~~Ir~i~l~~~~~--~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~-l-~ 471 (791)
T 3m0c_C 397 YLFFTNR-HEVRKMTLDRSEY--TSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD-I-Q 471 (791)
T ss_dssp EEEEECB-SSEEEECTTSCCC--EEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSS-C-S
T ss_pred ccccccc-cceeEeeccCCcc--eeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecC-C-C
Confidence 3555544 4467777765543 33232222233442222345666654 346788888754221 222222211 1 0
Q ss_pred Cceecccccccc-CCCeEEEEe--CCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEE
Q 003791 132 PLLLVPTNLKVD-KDSLILVSS--KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQIN 208 (795)
Q Consensus 132 ~~~~~~~~~~~~-~~~~V~V~~--~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald 208 (795)
.+.-+ +++ ..+.||+.. .++|.+++.......--... ....|..+..-...+.+|+... |. .-++..++
T Consensus 472 ~P~GL----AvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~--~l~~P~gIaVDp~~g~LYwtD~-g~-~~~I~~~~ 543 (791)
T 3m0c_C 472 APDGL----AVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE--NGSKPRAIVVDPVHGFMYWTDW-GT-PAKIKKGG 543 (791)
T ss_dssp CCCEE----EEETTTTEEEEEETTTTEEEEEETTSSSEEEEEEC--TTCCEEEEEEETTTTEEEEEEC-SS-SCEEEEEE
T ss_pred Cccee----eeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeC--CCCCcceEEEecCCCCEEEecC-CC-CCeEEEEe
Confidence 11111 222 135677763 67888888654332221111 1112444532224578887542 21 11566666
Q ss_pred cCCCceeeeeeeeccCCcccc--eEEe-cCcEEEEEECCCCeEEEEEee
Q 003791 209 AMNGELLNHETAAFSGGFVGD--VALV-SSDTLVTLDTTRSILVTVSFK 254 (795)
Q Consensus 209 ~~tG~~~w~~~v~~~~~~~~~--~~~v-g~~~lv~~d~~~~~L~v~~l~ 254 (795)
+. |..+... ...++... ..+- .++.|+|+|...+.+.+.++.
T Consensus 544 ~d-G~~~~~l---v~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~d 588 (791)
T 3m0c_C 544 LN-GVDIYSL---VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 588 (791)
T ss_dssp TT-SCCEEEE---ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cC-CCceEEE---EeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecC
Confidence 53 4332211 11122211 1111 245666777666666666654
No 295
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=69.33 E-value=1.9e+02 Score=34.39 Aligned_cols=190 Identities=14% Similarity=0.037 Sum_probs=91.7
Q ss_pred CCEEEEEeC-CCEEEEEECcCCcc--ceEEEcCCc-ceeeeeeeeeCCEEEEEEc-cCCeEEEEeCCCCcEeEEEeccCc
Q 003791 53 RKRVVVSTE-ENVIASLDLRHGEI--FWRHVLGIN-DVVDGIDIALGKYVITLSS-DGSTLRAWNLPDGQMVWESFLRGS 127 (795)
Q Consensus 53 ~~~v~vat~-~g~l~ALn~~tG~i--vWR~~l~~~-~~i~~l~~~~g~~~V~Vs~-~g~~v~A~d~~tG~llWe~~~~~~ 127 (795)
.++||++.. .+.|+.+++..... .++..+... ....++.+--.++.+|++. ..++|+..++. |...=.. +. .
T Consensus 435 ~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ld-G~~~~~l-~~-~ 511 (791)
T 3m0c_C 435 SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK-GVKRKTL-FR-E 511 (791)
T ss_dssp TTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT-SSSEEEE-EE-C
T ss_pred CCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCC-CCeEEEE-Ee-C
Confidence 567887775 46777777653211 233333322 1223442221233455543 45688888875 4432111 11 1
Q ss_pred cccCCceeccccccccC-CCeEEEEe---CCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeE
Q 003791 128 KHSKPLLLVPTNLKVDK-DSLILVSS---KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFH 203 (795)
Q Consensus 128 ~~s~~~~~~~~~~~~~~-~~~V~V~~---~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~ 203 (795)
.+.. +.- ++++. .+.+|+.. .++|.+++.......--.. ..- ..|..+......+.+|++..... +
T Consensus 512 ~l~~-P~g----IaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~-~~l-~~P~GLavD~~~~~LYwaD~~~~---~ 581 (791)
T 3m0c_C 512 NGSK-PRA----IVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT-ENI-QWPNGITLDLLSGRLYWVDSKLH---S 581 (791)
T ss_dssp TTCC-EEE----EEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEEC-SSC-SCEEEEEEETTTTEEEEEETTTT---E
T ss_pred CCCC-cce----EEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEe-CCC-CCceEEEEecCCCeEEEEeCCCC---c
Confidence 1101 101 12222 35677753 2677777754332222111 111 12444532235788998653333 6
Q ss_pred EEEEEcCCCceeeeeeeeccCCcccce-EEecCcEEEEEECCCCeEEEEEeecCe
Q 003791 204 AYQINAMNGELLNHETAAFSGGFVGDV-ALVSSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 204 v~ald~~tG~~~w~~~v~~~~~~~~~~-~~vg~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
|..+|+ +|..+.... .....+.... +-+.++.++|+|..++.+...+..+|+
T Consensus 582 I~~~d~-dG~~~~~v~-~~~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG~ 634 (791)
T 3m0c_C 582 ISSIDV-NGGNRKTIL-EDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGS 634 (791)
T ss_dssp EEEEET-TSCSCEEEE-ECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred EEEEec-CCCceEEEe-cCCCccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCCc
Confidence 777786 454433331 1112232211 123556888999988999999877776
No 296
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=68.07 E-value=95 Score=33.25 Aligned_cols=104 Identities=9% Similarity=0.116 Sum_probs=62.2
Q ss_pred EEEEEeCCCEEEEEEC-------cCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCC-----CCcEeEEE
Q 003791 55 RVVVSTEENVIASLDL-------RHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLP-----DGQMVWES 122 (795)
Q Consensus 55 ~v~vat~~g~l~ALn~-------~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~-----tG~llWe~ 122 (795)
.+||..++|.+.-+.. .+++++.++.++.. +.++.+-...+.+|++..+..|..+|+. +++++...
T Consensus 145 yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq--~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~ 222 (355)
T 3amr_A 145 YAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQ--TEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRA 222 (355)
T ss_dssp EEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSC--EEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEB
T ss_pred EEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCC--cceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEe
Confidence 4888888898776433 35677888888654 4455222356789999877679999966 57777655
Q ss_pred eccCccccCCceeccccccccCCCeEEEEe--CCEEEEEECC
Q 003791 123 FLRGSKHSKPLLLVPTNLKVDKDSLILVSS--KGCLHAVSSI 162 (795)
Q Consensus 123 ~~~~~~~s~~~~~~~~~~~~~~~~~V~V~~--~g~l~ald~~ 162 (795)
.. +.+..+++-+......++.+.+++.+ ++.+..+|..
T Consensus 223 ~~--g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 223 DG--RHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp SS--SSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred cC--CccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 32 22212222221000112224566664 6677777764
No 297
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=68.07 E-value=1e+02 Score=30.84 Aligned_cols=65 Identities=8% Similarity=0.073 Sum_probs=39.5
Q ss_pred CCEEEEEeCCCEEEEEECcCCccceEEEcCC-cceeeeeeeeeC--CEEEEEEccCCeEEEEeCCCCc
Q 003791 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGI-NDVVDGIDIALG--KYVITLSSDGSTLRAWNLPDGQ 117 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~-~~~i~~l~~~~g--~~~V~Vs~~g~~v~A~d~~tG~ 117 (795)
++.++.++.++.|.--|.++|+..=...+.. ...+..+..... +..++.++.++.++.||..++.
T Consensus 67 g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~ 134 (297)
T 2pm7_B 67 GTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENG 134 (297)
T ss_dssp CSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSS
T ss_pred CCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCC
Confidence 4678899999999999999885211112221 122333321111 3355546667899999998874
No 298
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=67.43 E-value=83 Score=36.75 Aligned_cols=180 Identities=15% Similarity=0.134 Sum_probs=96.7
Q ss_pred cCccceeeccccceeEEEeccCceee-----eeeeee------------ccCCCEEEEEeCCCEEEEEECcCCccceEEE
Q 003791 18 IPSLSLYEDQVGLMDWHQQYIGKVKH-----AVFHTQ------------KTGRKRVVVSTEENVIASLDLRHGEIFWRHV 80 (795)
Q Consensus 18 ~~~~Al~edq~G~~dW~~~~vG~~~~-----~~f~~~------------~~~~~~v~vat~~g~l~ALn~~tG~ivWR~~ 80 (795)
..+.++++|..|. .|=...-|--+. ..|..+ ...++.|+++|.+| |..+|+++++.. ..
T Consensus 22 n~V~~I~qD~~G~-lWigT~~GL~ryDG~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigT~~G-l~~yd~~~~~f~--~~ 97 (758)
T 3ott_A 22 SVVSCFLQDSEGL-IWIGSNKGLFSYDGYSTQQHFTYGENNNTRIYCGVIIDNTYLYMGTDNG-ILVYNYRADRYE--QP 97 (758)
T ss_dssp CCEEEEEECTTSC-EEEEESSCEEEECSSCEEECSCTTSTTSSCEEEEEEETTTEEEEEETTE-EEEEETTTTEEC--CC
T ss_pred ceEEEEEECCCCC-EEEEECCCccccCCCceEEEEccCCCCCceEEEEEEcCCCcEEEEeCCC-eEEEeCCCCEEE--Cc
Confidence 4567999998885 475444343221 011100 11367799999876 789999987532 21
Q ss_pred cCC-cceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccCCceeccccccccCCCeEEEEeCCEEEEE
Q 003791 81 LGI-NDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSSKGCLHAV 159 (795)
Q Consensus 81 l~~-~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~~~g~l~al 159 (795)
... ...+..+ ...++.+.+++.+ .+..+|..+++.. ........++.. .+.. ...+.++.+.+...+.|.++
T Consensus 98 ~~~~~~~i~~i--~~~~g~lWigt~~-Gl~~~~~~~~~~~-~~~~~~~~l~~~-~i~~--i~~d~~g~lWigt~~Gl~~~ 170 (758)
T 3ott_A 98 ETDFPTDVRTM--ALQGDTLWLGALN-GLYTYQLQSRKLT-SFDTRRNGLPNN-TIYS--IIRTKDNQIYVGTYNGLCRY 170 (758)
T ss_dssp SCCCCSCEEEE--EEETTEEEEEETT-EEEEEETTTCCEE-EECHHHHCCSCS-CEEE--EEECTTCCEEEEETTEEEEE
T ss_pred ccCCCceEEEE--EecCCcEEEEcCC-cceeEeCCCCeEE-EeccCCCCcCCC-eEEE--EEEcCCCCEEEEeCCCHhhC
Confidence 111 1113223 2334566666654 6899999888753 221111111001 1111 13344678888877789999
Q ss_pred ECCCCcEEEEEeccCc----ceeeeeEEEEec-CCEEEEEEecCCceeEEEEEEcCCCcee
Q 003791 160 SSIDGEILWTRDFAAE----SVEVQQVIQLDE-SDQIYVVGYAGSSQFHAYQINAMNGELL 215 (795)
Q Consensus 160 d~~tG~~~W~~~~~~~----~~~~~~vv~s~~-~~~Vyvv~~~g~~~~~v~ald~~tG~~~ 215 (795)
+..+++... +..+.. ......+. ... ++.+++.+ .+ -+..+|+.+++..
T Consensus 171 ~~~~~~~~~-~~~~~~~~~~~~~i~~i~-~d~~~~~lWigt-~~----Gl~~~~~~~~~~~ 224 (758)
T 3ott_A 171 IPSNGKFEG-IPLPVHSSQSNLFVNSLL-EDTTRQCVWIGT-EG----YLFQYFPSTGQIK 224 (758)
T ss_dssp ETTTTEEEE-ECCCCCTTCSSCCEEEEE-EETTTTEEEEEE-EE----EEEEEETTTTEEE
T ss_pred ccCCCceEE-ecCCCccccccceeEEEE-EECCCCEEEEEE-CC----CCeEEcCCCCeEE
Confidence 998887542 222211 11122222 122 35688755 33 3888999888654
No 299
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=65.85 E-value=68 Score=36.59 Aligned_cols=108 Identities=24% Similarity=0.318 Sum_probs=63.2
Q ss_pred CEEEEEECcCCccceEEEcCCcce----eeeeeee----eCC-EEEEEEccCC---------------------------
Q 003791 63 NVIASLDLRHGEIFWRHVLGINDV----VDGIDIA----LGK-YVITLSSDGS--------------------------- 106 (795)
Q Consensus 63 g~l~ALn~~tG~ivWR~~l~~~~~----i~~l~~~----~g~-~~V~Vs~~g~--------------------------- 106 (795)
..|.|++. +|+.+||..+..... ...+.+. .|. .+++.+.+|.
T Consensus 151 ~~l~aY~l-dG~~LW~idlg~ni~aGa~yt~~~V~DlDGDGkaEIvv~TadGt~dg~g~~ig~~~~dyrn~~g~il~GpE 229 (591)
T 2zux_A 151 VLIDAYKL-DGTKLWRINLGKNIRAGAHYTQFMVYDLDGDGKAEVAMKTADGTKDGTGKVIGNANADYRNEQGRVLSGPE 229 (591)
T ss_dssp CEEEEECT-TSCEEEEEECCTTSCCSTTSCCCEEECSSSSSSCEEEEEECTTCBCTTSCBCSSTTCCCBCTTSCBCSSCC
T ss_pred cEEEEEEC-CCCEEEEEcCCCCcccccccCceeEEEcCCCCcceEEEEccCCcccCCceEecccccccccccceeecCCc
Confidence 57999998 599999999865411 0011111 122 2444333332
Q ss_pred eEEEEeCCCCcEeEEEeccCccccC-----------C--ceeccccccccCCC-eEEE-E---eCCEEEEEECCCCc--E
Q 003791 107 TLRAWNLPDGQMVWESFLRGSKHSK-----------P--LLLVPTNLKVDKDS-LILV-S---SKGCLHAVSSIDGE--I 166 (795)
Q Consensus 107 ~v~A~d~~tG~llWe~~~~~~~~s~-----------~--~~~~~~~~~~~~~~-~V~V-~---~~g~l~ald~~tG~--~ 166 (795)
.|..+|-.||+.++......+.... + ...++ ..++++ .+++ . ....|.|+|..+|+ +
T Consensus 230 yL~vfdG~TG~~l~~~~~~p~rg~~~~WGD~ygnR~drf~~~va---yLDG~~Ps~v~~rGyYtr~~v~A~d~~~~~L~~ 306 (591)
T 2zux_A 230 YLTVFQGSTGKELVTANFEPARGNVSDWGDSYGNRVDRFLAGIA---YLDGQRPSLIMTRGYYAKTMLVAYNFRDGKLSK 306 (591)
T ss_dssp EEEEEETTTCCEEEEEECSSCCCCGGGGTCSSSSGGGCEEEEEE---CTTSSSCEEEEEECCSSSCEEEEEEEETTEEEE
T ss_pred EEEEEeCCCCCEEecccCCCCCCcccccccccccccccceeeEE---ECCCCCceEEEeccccceeEEEEEECCCCceEE
Confidence 4999999999999998875322100 0 01111 122222 2333 2 25679999999997 5
Q ss_pred EEEEeccC
Q 003791 167 LWTRDFAA 174 (795)
Q Consensus 167 ~W~~~~~~ 174 (795)
+|++....
T Consensus 307 ~W~~d~~~ 314 (591)
T 2zux_A 307 LWTLDSSK 314 (591)
T ss_dssp EEEEETTS
T ss_pred EEEecCCC
Confidence 89998764
No 300
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=65.81 E-value=1.5e+02 Score=31.97 Aligned_cols=112 Identities=12% Similarity=0.055 Sum_probs=63.5
Q ss_pred CCCEEE----EEeCCCEEEEEECcCC--------ccceEEEcCC--cceeeeeeee-eCCEEEEEEccCCeEEEEeCCCC
Q 003791 52 GRKRVV----VSTEENVIASLDLRHG--------EIFWRHVLGI--NDVVDGIDIA-LGKYVITLSSDGSTLRAWNLPDG 116 (795)
Q Consensus 52 ~~~~v~----vat~~g~l~ALn~~tG--------~ivWR~~l~~--~~~i~~l~~~-~g~~~V~Vs~~g~~v~A~d~~tG 116 (795)
+++.++ .++.++.|.-.|.+++ +.+.....-. ...+..+... .++..+..++.++.|+.||..+|
T Consensus 103 dg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~ 182 (434)
T 2oit_A 103 DNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTET 182 (434)
T ss_dssp TSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSS
T ss_pred CCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCC
Confidence 355666 3556889999998877 4444444422 2234443222 22345554555679999999999
Q ss_pred cEeEEEeccCccccCCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEe
Q 003791 117 QMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRD 171 (795)
Q Consensus 117 ~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~ 171 (795)
............. ..+..-+ + ++.+++. .+|.+..+|.. |+..=+..
T Consensus 183 ~~~~~~~~~~~~v-~~v~wsp-----d-g~~lasgs~dg~v~iwd~~-~~~~~~~~ 230 (434)
T 2oit_A 183 VKVCATLPSTVAV-TSVCWSP-----K-GKQLAVGKQNGTVVQYLPT-LQEKKVIP 230 (434)
T ss_dssp EEEEEEECGGGCE-EEEEECT-----T-SSCEEEEETTSCEEEECTT-CCEEEEEC
T ss_pred cceeeccCCCCce-eEEEEcC-----C-CCEEEEEcCCCcEEEEccC-Cccccccc
Confidence 7765544322221 1111111 2 3445555 48899999987 76654443
No 301
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=64.81 E-value=1.3e+02 Score=31.03 Aligned_cols=183 Identities=9% Similarity=-0.025 Sum_probs=81.4
Q ss_pred EEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEc-cCCeEEEEeCCCCcE-eEEEeccCccccCC
Q 003791 55 RVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSS-DGSTLRAWNLPDGQM-VWESFLRGSKHSKP 132 (795)
Q Consensus 55 ~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~-~g~~v~A~d~~tG~l-lWe~~~~~~~~s~~ 132 (795)
.++++. .+.|..+|+..+...-...+..-....++.....++.+|++. .++.|+.+++..+.. .+.....-. .+
T Consensus 6 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~---~p 81 (318)
T 3sov_A 6 LLLYAN-RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLL---SP 81 (318)
T ss_dssp EEEEEC-EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCS---CC
T ss_pred EEEEEc-cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCC---Cc
Confidence 355544 567788888665423333222111111221122344566553 456888888876632 222211100 00
Q ss_pred ceecccccccc-CCCeEEEE--eCCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEc
Q 003791 133 LLLVPTNLKVD-KDSLILVS--SKGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINA 209 (795)
Q Consensus 133 ~~~~~~~~~~~-~~~~V~V~--~~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~ 209 (795)
..+ +.+ ..+.+|+. ..+.+..++........... .. ...|..+..-...+.+|+..... .-++..+++
T Consensus 82 ~gl-----avd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~-~~-~~~P~giavdp~~g~ly~td~~~--~~~I~r~~~ 152 (318)
T 3sov_A 82 DGL-----ACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFW-QE-LDQPRAIALDPSSGFMYWTDWGE--VPKIERAGM 152 (318)
T ss_dssp CEE-----EEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-SS-CSSEEEEEEEGGGTEEEEEECSS--SCEEEEEET
T ss_pred cEE-----EEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEe-CC-CCCccEEEEeCCCCEEEEEecCC--CCEEEEEEc
Confidence 001 222 24566665 26678888765433222221 11 11244443222467888754321 126777776
Q ss_pred CCCceeeeeeeeccCCccc--ceEEe-cCcEEEEEECCCCeEEEEEee
Q 003791 210 MNGELLNHETAAFSGGFVG--DVALV-SSDTLVTLDTTRSILVTVSFK 254 (795)
Q Consensus 210 ~tG~~~w~~~v~~~~~~~~--~~~~v-g~~~lv~~d~~~~~L~v~~l~ 254 (795)
. |...... ...++.. ...+- .++.++|+|..++.+.+.++.
T Consensus 153 d-G~~~~~~---~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~d 196 (318)
T 3sov_A 153 D-GSSRFII---INSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 196 (318)
T ss_dssp T-SCSCEEE---ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred C-CCCeEEE---EECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCC
Confidence 4 4332211 0111211 11111 245566666666666666654
No 302
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=63.93 E-value=1.5e+02 Score=31.40 Aligned_cols=185 Identities=15% Similarity=0.057 Sum_probs=87.6
Q ss_pred CCEEEEEeC-CCEEEEEECcCCccceEEEcCCc-ceeeeeeeeeCCEEEEEEc-cCCeEEEEeCCCCcEeEEEeccCccc
Q 003791 53 RKRVVVSTE-ENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIALGKYVITLSS-DGSTLRAWNLPDGQMVWESFLRGSKH 129 (795)
Q Consensus 53 ~~~v~vat~-~g~l~ALn~~tG~ivWR~~l~~~-~~i~~l~~~~g~~~V~Vs~-~g~~v~A~d~~tG~llWe~~~~~~~~ 129 (795)
+++||+++. .+.|..+++..+.. +..+... ....++.+.-.++.+|++. ..+.|..++...+...-- +.. .+
T Consensus 127 ~~~ly~~D~~~~~I~r~~~~g~~~--~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l--~~~-~l 201 (386)
T 3v65_B 127 RELVFWSDVTLDRILRANLNGSNV--EEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVL--LWQ-SL 201 (386)
T ss_dssp TTEEEEEETTTTEEEEEETTSCCE--EEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEE--ECS-SC
T ss_pred CCeEEEEeCCCCcEEEEecCCCCc--EEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEe--ecC-CC
Confidence 566777763 56777777765532 2222211 1122342221234555543 346788877653321111 111 11
Q ss_pred cCCceecccccccc-CCCeEEEEe--C-CEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEE
Q 003791 130 SKPLLLVPTNLKVD-KDSLILVSS--K-GCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAY 205 (795)
Q Consensus 130 s~~~~~~~~~~~~~-~~~~V~V~~--~-g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ 205 (795)
..+.. .+++ ..+.+|+.. . +.|++++.. |..+-..-...-. .|..+.....++.+|+.....+ ++.
T Consensus 202 ~~P~g-----iavdp~~g~ly~td~~~~~~I~r~~~d-G~~~~~~~~~~~~-~PnGlavd~~~~~lY~aD~~~~---~I~ 271 (386)
T 3v65_B 202 EKPRA-----IALHPMEGTIYWTDWGNTPRIEASSMD-GSGRRIIADTHLF-WPNGLTIDYAGRRMYWVDAKHH---VIE 271 (386)
T ss_dssp SCEEE-----EEEETTTTEEEEEECSSSCEEEEEETT-SCSCEEEECSSCS-CEEEEEEEGGGTEEEEEETTTT---EEE
T ss_pred CCCcE-----EEEEcCCCeEEEeccCCCCEEEEEeCC-CCCcEEEEECCCC-CeeeEEEeCCCCEEEEEECCCC---EEE
Confidence 00001 1223 245666653 3 678888754 4322222111111 1334432235788998654433 678
Q ss_pred EEEcCCCceeeeeeeeccCCccc--ceEEecCcEEEEEECCCCeEEEEEeecCe
Q 003791 206 QINAMNGELLNHETAAFSGGFVG--DVALVSSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 206 ald~~tG~~~w~~~v~~~~~~~~--~~~~vg~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
.+|.. |...... ...++.. ... +.++.++|+|..++.+..++..+|+
T Consensus 272 ~~d~d-G~~~~~~---~~~~~~~P~gia-v~~~~ly~td~~~~~V~~~~~~~G~ 320 (386)
T 3v65_B 272 RANLD-GSHRKAV---ISQGLPHPFAIT-VFEDSLYWTDWHTKSINSANKFTGK 320 (386)
T ss_dssp EECTT-SCSCEEE---ECSSCSSEEEEE-EETTEEEEEETTTTEEEEEETTTCC
T ss_pred EEeCC-CCeeEEE---EECCCCCceEEE-EECCEEEEeeCCCCeEEEEECCCCc
Confidence 88864 4322111 1111211 122 2556777888888888888755665
No 303
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=63.47 E-value=2.1e+02 Score=32.79 Aligned_cols=182 Identities=9% Similarity=0.015 Sum_probs=74.1
Q ss_pred EEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEc-cCCeEEEEeCCCCcEeEEEeccCccccCCcee
Q 003791 57 VVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSS-DGSTLRAWNLPDGQMVWESFLRGSKHSKPLLL 135 (795)
Q Consensus 57 ~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~-~g~~v~A~d~~tG~llWe~~~~~~~~s~~~~~ 135 (795)
..-+..+.|..+|...+...=......-....++.....++.||++. ..++++.++...+ ..++.-+..+.. .+.-
T Consensus 12 ~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~-~~~~~v~~~~~~--~P~G 88 (619)
T 3s94_A 12 LLYANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKT-ESVQNVVVSGLL--SPDG 88 (619)
T ss_dssp EEEECSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CEEEECSSCS--CEEE
T ss_pred EEEeccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCC-CceEEEEeCCCC--CcCe
Confidence 33344566777777543211111111111122332233455676664 3467888887543 333333332211 1111
Q ss_pred ccccccccC-CCeEEEEe--CCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcCCC
Q 003791 136 VPTNLKVDK-DSLILVSS--KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNG 212 (795)
Q Consensus 136 ~~~~~~~~~-~~~V~V~~--~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~tG 212 (795)
+ +.+. .+.+|+.. .+.+..++.......--.. .. -..|..+..-...+.+|+... |. .-++...++ +|
T Consensus 89 l----AvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~-~~-l~~P~~Iavdp~~g~ly~tD~-g~-~~~I~r~~~-dG 159 (619)
T 3s94_A 89 L----ACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFW-QE-LDQPRAIALDPSSGFMYWTDW-GE-VPKIERAGM-DG 159 (619)
T ss_dssp E----EEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-SS-CSCCCCEEEETTTTEEEEEEC-SS-SCEEEEEET-TS
T ss_pred E----EEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEe-CC-CCCCceEEEecCCCeEEEecc-CC-CCEEEEEEC-CC
Confidence 1 2332 45666653 6778888765433221111 11 112444432224577887542 21 124555554 34
Q ss_pred ceeeee---eeeccCCcccceEEe-cCcEEEEEECCCCeEEEEEee
Q 003791 213 ELLNHE---TAAFSGGFVGDVALV-SSDTLVTLDTTRSILVTVSFK 254 (795)
Q Consensus 213 ~~~w~~---~v~~~~~~~~~~~~v-g~~~lv~~d~~~~~L~v~~l~ 254 (795)
...... .+..|.+ ..+- .++.++|+|...+.+.+.++.
T Consensus 160 ~~~~~l~~~~~~~P~G----lald~~~~~LY~aD~~~~~I~~~~~d 201 (619)
T 3s94_A 160 SSRFIIINSEIYWPNG----LTLDYEEQKLYWADAKLNFIHKSNLD 201 (619)
T ss_dssp CSCEEEECSSCSSEEE----EEEETTTTEEEEEETTTCCEEEESSS
T ss_pred CceEEEEeCCCCCCcE----EEEEccCCEEEEEeCCCCeEEEecCC
Confidence 322211 1111211 1111 235566666666666666654
No 304
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=63.30 E-value=1.5e+02 Score=31.14 Aligned_cols=60 Identities=15% Similarity=0.201 Sum_probs=36.0
Q ss_pred CCEEEEEeCCCEEEEEECcCCccceEEEc--C---Cc-ceeeeeeeeeC---CEEEEEEcc----C----CeEEEEeCCC
Q 003791 53 RKRVVVSTEENVIASLDLRHGEIFWRHVL--G---IN-DVVDGIDIALG---KYVITLSSD----G----STLRAWNLPD 115 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~ivWR~~l--~---~~-~~i~~l~~~~g---~~~V~Vs~~----g----~~v~A~d~~t 115 (795)
++++||+...|.|..+| .+|+ +... + .. ....++.+.-+ ++.+||+.. + ..|..|+...
T Consensus 39 dG~l~V~e~~g~I~~~d-~~G~---~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~ 114 (354)
T 3a9g_A 39 GGRYLVTERPGRLVLIS-PSGK---KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDG 114 (354)
T ss_dssp TTEEEEEETTTEEEEEC-SSCE---EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECS
T ss_pred CCeEEEEeCCCEEEEEe-CCCc---eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECC
Confidence 67899999999999998 5786 3221 1 11 11223322112 467777532 2 5788888765
Q ss_pred C
Q 003791 116 G 116 (795)
Q Consensus 116 G 116 (795)
+
T Consensus 115 ~ 115 (354)
T 3a9g_A 115 S 115 (354)
T ss_dssp S
T ss_pred C
Confidence 5
No 305
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=63.20 E-value=54 Score=37.78 Aligned_cols=142 Identities=12% Similarity=0.129 Sum_probs=73.4
Q ss_pred EEEEECcCCccceEEEcCCcceeeeeeeee-CCEEEEEEccC-----------CeEEEEeCCCCcEeEEEeccCccccCC
Q 003791 65 IASLDLRHGEIFWRHVLGINDVVDGIDIAL-GKYVITLSSDG-----------STLRAWNLPDGQMVWESFLRGSKHSKP 132 (795)
Q Consensus 65 l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~-g~~~V~Vs~~g-----------~~v~A~d~~tG~llWe~~~~~~~~s~~ 132 (795)
+.++|+.+| .|+...+-+.......+.. ++.+++++|.+ ..+..||+.+++ |+.....+.. ..
T Consensus 168 ~~~~dp~~~--~W~~~~~~P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~--w~~~~~~~~~-~~ 242 (656)
T 1k3i_A 168 YTAPQPGLG--RWGPTIDLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGI--VSDRTVTVTK-HD 242 (656)
T ss_dssp CCCCCTTSC--EEEEEEECSSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCC--BCCCEEEECS-CC
T ss_pred cccCCCCCC--eeeeeccCCCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCc--EEeCcccCCC-CC
Confidence 556777777 6987654442111221122 55555656532 158889999885 5432111000 00
Q ss_pred ceeccccccccCCCeEEEEe---CCEEEEEECCCCcEEEEEeccCccee-eeeEEEEecCCEEEEEEec--CC-ceeEEE
Q 003791 133 LLLVPTNLKVDKDSLILVSS---KGCLHAVSSIDGEILWTRDFAAESVE-VQQVIQLDESDQIYVVGYA--GS-SQFHAY 205 (795)
Q Consensus 133 ~~~~~~~~~~~~~~~V~V~~---~g~l~ald~~tG~~~W~~~~~~~~~~-~~~vv~s~~~~~Vyvv~~~--g~-~~~~v~ 205 (795)
....+ .....++.+++.+ +..+..+|..++ .|+.-.+.+.-. ...+. ...++.+|++|-. ++ ..-.+.
T Consensus 243 ~~~~~--~~~~~~g~lyv~GG~~~~~v~~yd~~t~--~W~~~~~~~~~R~~~s~~-~~~dg~iyv~GG~~~~~~~~~~~e 317 (656)
T 1k3i_A 243 MFCPG--ISMDGNGQIVVTGGNDAKKTSLYDSSSD--SWIPGPDMQVARGYQSSA-TMSDGRVFTIGGSWSGGVFEKNGE 317 (656)
T ss_dssp CSSCE--EEECTTSCEEEECSSSTTCEEEEEGGGT--EEEECCCCSSCCSSCEEE-ECTTSCEEEECCCCCSSSCCCCEE
T ss_pred Ccccc--ccCCCCCCEEEeCCCCCCceEEecCcCC--ceeECCCCCccccccceE-EecCCeEEEEeCcccCCcccccce
Confidence 00000 0111256677753 457999999887 688643322110 11121 2348899998752 11 113577
Q ss_pred EEEcCCCceeeee
Q 003791 206 QINAMNGELLNHE 218 (795)
Q Consensus 206 ald~~tG~~~w~~ 218 (795)
.+|+.+++ |+.
T Consensus 318 ~yd~~t~~--W~~ 328 (656)
T 1k3i_A 318 VYSPSSKT--WTS 328 (656)
T ss_dssp EEETTTTE--EEE
T ss_pred EeCCCCCc--cee
Confidence 88998865 665
No 306
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=62.58 E-value=1.7e+02 Score=31.36 Aligned_cols=190 Identities=12% Similarity=-0.006 Sum_probs=89.1
Q ss_pred CCEEEEEeC-CCEEEEEECcCCc--cceEEEcCCc-ceeeeeeeeeCCEEEEEE-ccCCeEEEEeCCCCcEeEEEeccCc
Q 003791 53 RKRVVVSTE-ENVIASLDLRHGE--IFWRHVLGIN-DVVDGIDIALGKYVITLS-SDGSTLRAWNLPDGQMVWESFLRGS 127 (795)
Q Consensus 53 ~~~v~vat~-~g~l~ALn~~tG~--ivWR~~l~~~-~~i~~l~~~~g~~~V~Vs-~~g~~v~A~d~~tG~llWe~~~~~~ 127 (795)
+++||+++. .+.|..+++..+. .......... ....++.+...++.+|++ ...+.|+..|+..+...--.. .
T Consensus 123 ~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~--~- 199 (400)
T 3p5b_L 123 SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR--E- 199 (400)
T ss_dssp TTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEE--C-
T ss_pred cCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEe--C-
Confidence 567888764 5678888775422 1122222211 122344222123445554 334678888875443221111 1
Q ss_pred cccCCceeccccccccC-CCeEEEEe---CCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeE
Q 003791 128 KHSKPLLLVPTNLKVDK-DSLILVSS---KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFH 203 (795)
Q Consensus 128 ~~s~~~~~~~~~~~~~~-~~~V~V~~---~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~ 203 (795)
.+ ..+.- .+++. .+.+|+.. .+.+.+++.. |..+-..-...- ..|..+.....++.+|+...... +
T Consensus 200 ~~-~~P~~----iavdp~~g~ly~td~~~~~~I~~~~~d-G~~~~~~~~~~l-~~P~glavd~~~~~lY~aD~~~~---~ 269 (400)
T 3p5b_L 200 NG-SKPRA----IVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTENI-QWPNGITLDLLSGRLYWVDSKLH---S 269 (400)
T ss_dssp SS-CCEEE----EEEETTTTEEEEEECSSSCCEEEEETT-SCSCEEEECSSC-SCEEEEEEETTTTEEEEEETTTT---E
T ss_pred CC-CCcce----EEEecccCeEEEEeCCCCCEEEEEeCC-CCccEEEEECCC-CceEEEEEEeCCCEEEEEECCCC---E
Confidence 11 00101 12221 45666653 3567777754 332211111111 11444432235788998654333 6
Q ss_pred EEEEEcCCCceeeeeeeeccCCcccc-eEEecCcEEEEEECCCCeEEEEEeecCe
Q 003791 204 AYQINAMNGELLNHETAAFSGGFVGD-VALVSSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 204 v~ald~~tG~~~w~~~v~~~~~~~~~-~~~vg~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
+..+|.. |..+.... ..+..+... -+-+.++.++|+|..++.+...+..+|+
T Consensus 270 I~~~d~d-G~~~~~~~-~~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G~ 322 (400)
T 3p5b_L 270 ISSIDVN-GGNRKTIL-EDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGS 322 (400)
T ss_dssp EEEEETT-SCCCEEEE-ECSSTTSSEEEEEEETTEEEEEESSSCSEEEEESSSCC
T ss_pred EEEEeCC-CCccEEEE-eCCCCCCCCEEEEEeCCEEEEecCCCCeEEEEEcCCCC
Confidence 7888874 44332221 111222221 1223566788899888888888866665
No 307
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=61.66 E-value=1.4e+02 Score=30.16 Aligned_cols=66 Identities=9% Similarity=0.123 Sum_probs=37.9
Q ss_pred cCCCEEEEEeCC-----CEEEEEECcCCccceEEEcCCcceeeeeeee-eCCEEEEEEcc--------------------
Q 003791 51 TGRKRVVVSTEE-----NVIASLDLRHGEIFWRHVLGINDVVDGIDIA-LGKYVITLSSD-------------------- 104 (795)
Q Consensus 51 ~~~~~v~vat~~-----g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~-~g~~~V~Vs~~-------------------- 104 (795)
++++.|++++.+ ..|+.+|..+|+..-- ...+. +..+... .++.+++.+..
T Consensus 68 pDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l--~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~ 144 (347)
T 2gop_A 68 PDGKKIAFMRANEEKKVSEIWVADLETLSSKKI--LEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDL 144 (347)
T ss_dssp TTSSEEEEEEEETTTTEEEEEEEETTTTEEEEE--EEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC----
T ss_pred CCCCEEEEEEeccCCCcceEEEEECCCCceEEE--EcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCc
Confidence 445666666542 3589999988875332 22222 3332222 34556665422
Q ss_pred ------CCeEEEEeCCCCcEe
Q 003791 105 ------GSTLRAWNLPDGQMV 119 (795)
Q Consensus 105 ------g~~v~A~d~~tG~ll 119 (795)
...|+.||..+|+.+
T Consensus 145 ~~~~~~~~~l~~~d~~~~~~~ 165 (347)
T 2gop_A 145 GFFDGEKTTFWIFDTESEEVI 165 (347)
T ss_dssp -----CEEEEEEEETTTTEEE
T ss_pred ccccCccceEEEEECCCCeEE
Confidence 257999999999873
No 308
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=60.72 E-value=1.5e+02 Score=34.00 Aligned_cols=67 Identities=12% Similarity=0.159 Sum_probs=42.1
Q ss_pred CCEEEEEeC--CCEEEEEECcCCccceEEEcCCcceee-eeeeee-CCEEEEEEc-cC-----CeEEEEeCCCCcEeEEE
Q 003791 53 RKRVVVSTE--ENVIASLDLRHGEIFWRHVLGINDVVD-GIDIAL-GKYVITLSS-DG-----STLRAWNLPDGQMVWES 122 (795)
Q Consensus 53 ~~~v~vat~--~g~l~ALn~~tG~ivWR~~l~~~~~i~-~l~~~~-g~~~V~Vs~-~g-----~~v~A~d~~tG~llWe~ 122 (795)
+++||+... .+.+..+|+.++ .|+..-+.+..-. ...... ++.+++++| .+ ..+..||+.+++ |+.
T Consensus 253 ~g~lyv~GG~~~~~v~~yd~~t~--~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~--W~~ 328 (656)
T 1k3i_A 253 NGQIVVTGGNDAKKTSLYDSSSD--SWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT--WTS 328 (656)
T ss_dssp TSCEEEECSSSTTCEEEEEGGGT--EEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE--EEE
T ss_pred CCCEEEeCCCCCCceEEecCcCC--ceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc--cee
Confidence 677888765 457999999987 6987643221111 111234 455555566 22 469999999876 887
Q ss_pred e
Q 003791 123 F 123 (795)
Q Consensus 123 ~ 123 (795)
.
T Consensus 329 ~ 329 (656)
T 1k3i_A 329 L 329 (656)
T ss_dssp E
T ss_pred C
Confidence 4
No 309
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=60.13 E-value=1.5e+02 Score=30.09 Aligned_cols=62 Identities=11% Similarity=0.179 Sum_probs=38.7
Q ss_pred CEEEEEeCCCEEEEEECcCCccceEEEcC---CcceeeeeeeeeCCEEEEEEccCCeEEEEeCCC
Q 003791 54 KRVVVSTEENVIASLDLRHGEIFWRHVLG---INDVVDGIDIALGKYVITLSSDGSTLRAWNLPD 115 (795)
Q Consensus 54 ~~v~vat~~g~l~ALn~~tG~ivWR~~l~---~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~t 115 (795)
+.+++++.++.|.-.|.++|+..-...+. ....+..+.....+..++.++.++.|+.||..+
T Consensus 25 ~~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~ 89 (330)
T 2hes_X 25 GILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEE 89 (330)
T ss_dssp TEEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC--
T ss_pred CEEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEccc
Confidence 37888999999999999887543334442 223344442223344555466677999999864
No 310
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=58.33 E-value=2.6e+02 Score=32.12 Aligned_cols=143 Identities=8% Similarity=-0.042 Sum_probs=66.2
Q ss_pred EEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEc-cCCeEEEEeCCCCcEeEEEeccCccccCCc
Q 003791 55 RVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSS-DGSTLRAWNLPDGQMVWESFLRGSKHSKPL 133 (795)
Q Consensus 55 ~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~-~g~~v~A~d~~tG~llWe~~~~~~~~s~~~ 133 (795)
.|+++ ..+.|..+|.++.+..-...+..-....++.....++.+|++. .++.|+.+++..+... .-+..+.. .+.
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~--~v~~~g~~-~P~ 83 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALE--HVVEFGLD-YPE 83 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE--EEECSSCS-CCC
T ss_pred EEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcE--EEEeCCCC-Ccc
Confidence 34444 5677889998766543222222111222332233456777764 3568888887544322 11111110 000
Q ss_pred eecccccccc-CCCeEEEEe--CCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcC
Q 003791 134 LLVPTNLKVD-KDSLILVSS--KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAM 210 (795)
Q Consensus 134 ~~~~~~~~~~-~~~~V~V~~--~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~ 210 (795)
.+ +.+ ..+.+|+.. .+++..++...+...=-.. ..-..|..+..-...+.+|+... |. .-++..+++.
T Consensus 84 Gl-----AvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~--~~l~~P~~iavdp~~G~lY~tD~-g~-~~~I~r~~~d 154 (628)
T 4a0p_A 84 GM-----AVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVW--KDLDSPRALALDPAEGFMYWTEW-GG-KPKIDRAAMD 154 (628)
T ss_dssp EE-----EEETTTTEEEEEETTTTEEEEEETTSTTCEEEEC--SSCCCEEEEEEETTTTEEEEEEC-SS-SCEEEEEETT
T ss_pred eE-----EEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEe--CCCCCcccEEEccCCCeEEEeCC-CC-CCEEEEEeCC
Confidence 11 222 145666653 6778888765332211110 11112444532224678887543 21 1256666654
No 311
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=57.60 E-value=2e+02 Score=30.69 Aligned_cols=184 Identities=10% Similarity=0.040 Sum_probs=82.0
Q ss_pred EEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEc-cCCeEEEEeCCCCcE--eEEEeccCccccC
Q 003791 55 RVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSS-DGSTLRAWNLPDGQM--VWESFLRGSKHSK 131 (795)
Q Consensus 55 ~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~-~g~~v~A~d~~tG~l--lWe~~~~~~~~s~ 131 (795)
.++++. .+.|..++...++.... ........++.....++.+|++. .++.|+.+++..+.. ..+..+... + .
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~--~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~-~-~ 159 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSL--IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD-I-Q 159 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEE--ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSS-C-S
T ss_pred eeEEec-cceeEEEccCCcceeEe--ccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCC-C-C
Confidence 355554 57889999877654443 33222233442233455666654 456888888754321 111111111 1 0
Q ss_pred CceeccccccccC-CCeEEEEe--CCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEE
Q 003791 132 PLLLVPTNLKVDK-DSLILVSS--KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQIN 208 (795)
Q Consensus 132 ~~~~~~~~~~~~~-~~~V~V~~--~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald 208 (795)
.+.-+ +++. .+.+|+.. .+++..++...+...-..... ...|..+..-...+.+|+... +. .-++..++
T Consensus 160 ~p~gl----avD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~--~~~P~~iavdp~~g~ly~td~-~~-~~~I~~~~ 231 (400)
T 3p5b_L 160 APDGL----AVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREN--GSKPRAIVVDPVHGFMYWTDW-GT-PAKIKKGG 231 (400)
T ss_dssp CEEEE----EEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECS--SCCEEEEEEETTTTEEEEEEC-SS-SCCEEEEE
T ss_pred CcccE----EEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCC--CCCcceEEEecccCeEEEEeC-CC-CCEEEEEe
Confidence 11111 2221 45666653 567777776544433222211 111444431124677887542 21 11466666
Q ss_pred cCCCceeeeeeeeccCCccc--ceEEe-cCcEEEEEECCCCeEEEEEeec
Q 003791 209 AMNGELLNHETAAFSGGFVG--DVALV-SSDTLVTLDTTRSILVTVSFKN 255 (795)
Q Consensus 209 ~~tG~~~w~~~v~~~~~~~~--~~~~v-g~~~lv~~d~~~~~L~v~~l~s 255 (795)
+. |...... ...++.. ...+- .++.++|+|..++.+.+.++..
T Consensus 232 ~d-G~~~~~~---~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG 277 (400)
T 3p5b_L 232 LN-GVDIYSL---VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 277 (400)
T ss_dssp TT-SCSCEEE---ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CC-CCccEEE---EECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCC
Confidence 53 4322111 0111111 11111 2456666676666666666543
No 312
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=55.75 E-value=40 Score=39.52 Aligned_cols=150 Identities=9% Similarity=0.051 Sum_probs=70.3
Q ss_pred CCEEEEEeC-CCEEEEEECcCCccceEEEcCCc-ceeeeeeeeeCCEEEEEEccC--CeEEEEeCCCCcEeEEEeccCcc
Q 003791 53 RKRVVVSTE-ENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIALGKYVITLSSDG--STLRAWNLPDGQMVWESFLRGSK 128 (795)
Q Consensus 53 ~~~v~vat~-~g~l~ALn~~tG~ivWR~~l~~~-~~i~~l~~~~g~~~V~Vs~~g--~~v~A~d~~tG~llWe~~~~~~~ 128 (795)
.+.||++.. .+.|..+++..+.+.. .+... ....++.+...++.+|++..+ ++|+.+++ +|...=.. +.. .
T Consensus 464 ~g~LY~tD~~~~~I~v~d~dg~~~~~--l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~-dG~~~~~l-~~~-~ 538 (699)
T 1n7d_A 464 HSNIYWTDSVLGTVSVADTKGVKRKT--LFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL-NGVDIYSL-VTE-N 538 (699)
T ss_dssp SSBCEECCTTTSCEEEEBSSSCCEEE--ECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCS-SSCCCCEE-SCS-S
T ss_pred CCcEEEEeccCCeEEEEecCCCceEE--EEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeC-CCCCeeEE-EeC-C
Confidence 456777653 4677888765432221 11111 111233111234556655422 46666665 34322111 001 1
Q ss_pred ccCCceeccccccccC-CCeEEEEe--CCEEEEEECCCCcEEEEEeccCcc-eeeeeEEEEecCCEEEEEEecCCceeEE
Q 003791 129 HSKPLLLVPTNLKVDK-DSLILVSS--KGCLHAVSSIDGEILWTRDFAAES-VEVQQVIQLDESDQIYVVGYAGSSQFHA 204 (795)
Q Consensus 129 ~s~~~~~~~~~~~~~~-~~~V~V~~--~g~l~ald~~tG~~~W~~~~~~~~-~~~~~vv~s~~~~~Vyvv~~~g~~~~~v 204 (795)
+ ..|..++++. .+.+|+.. .++|.+++.. |..+-.+-..... ..|..+ ...++.+|+....++ +|
T Consensus 539 l-----~~PnGlavd~~~~~LY~aD~~~~~I~~~d~d-G~~~~~~~~~~~~~~~P~gl--avd~~~lywtd~~~~---~V 607 (699)
T 1n7d_A 539 I-----QWPNGITLDLLSGRLYWVDSKLHSISSIDVN-GGNRKTILEDEKRLAHPFSL--AVFEDKVFWTDIINE---AI 607 (699)
T ss_dssp C-----SSCCCEEECTTTCCEEEEETTTTEEEEECSS-SSCCEEECCCSSSCSSCCCC--EEETTEEEEECSTTT---CE
T ss_pred C-----CCccEEEEeccCCEEEEEecCCCeEEEEccC-CCceEEEEecCCcCCCceEe--EEECCEEEEEeCCCC---eE
Confidence 1 0111112221 35677763 6788888875 3322222111111 113333 235678888764444 68
Q ss_pred EEEEcCCCceeeee
Q 003791 205 YQINAMNGELLNHE 218 (795)
Q Consensus 205 ~ald~~tG~~~w~~ 218 (795)
..+|..+|+.+...
T Consensus 608 ~~~d~~~G~~~~~i 621 (699)
T 1n7d_A 608 FSANRLTGSDVNLL 621 (699)
T ss_dssp EEEETTTEEEEECC
T ss_pred EEEEccCCCceEEe
Confidence 88999899876544
No 313
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=55.39 E-value=2.6e+02 Score=31.25 Aligned_cols=62 Identities=10% Similarity=0.087 Sum_probs=34.9
Q ss_pred CCEEEEEeCCC-------EEEEEECcC-Cccce---EEEcCCcceeeeeeeeeCCEEEEEEc-cCCeEEEEeCC
Q 003791 53 RKRVVVSTEEN-------VIASLDLRH-GEIFW---RHVLGINDVVDGIDIALGKYVITLSS-DGSTLRAWNLP 114 (795)
Q Consensus 53 ~~~v~vat~~g-------~l~ALn~~t-G~ivW---R~~l~~~~~i~~l~~~~g~~~V~Vs~-~g~~v~A~d~~ 114 (795)
++.+|+++..+ .++.++.+. |+..+ ++.+.......++.+...++.+|++. ..+.|+.+|..
T Consensus 204 G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 204 AEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp TCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred CCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 45699998875 377887554 66553 12232111112332222345666654 45689999998
No 314
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=52.77 E-value=3.2e+02 Score=31.60 Aligned_cols=155 Identities=6% Similarity=0.026 Sum_probs=76.8
Q ss_pred eCCEEEEEEccC----CeEEEEeCCCCcEeEEEec-cC--ccccCCceeccccccccC-CCeEEEEeC--------CEEE
Q 003791 94 LGKYVITLSSDG----STLRAWNLPDGQMVWESFL-RG--SKHSKPLLLVPTNLKVDK-DSLILVSSK--------GCLH 157 (795)
Q Consensus 94 ~g~~~V~Vs~~g----~~v~A~d~~tG~llWe~~~-~~--~~~s~~~~~~~~~~~~~~-~~~V~V~~~--------g~l~ 157 (795)
.++.++++||.+ ..+..+|+.+++ |+... .. +.. ..+.......... ++.++|.++ ..+.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~--W~~~~~~~p~~~~--p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~ 471 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDK--IDMKNIEVSSSEV--PVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNW 471 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSC--EEEEECCCCCSCC--CCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCe--EEEeccCCCCCCC--CccccceEEEEEccCCEEEEEcCCCCCCCccccEE
Confidence 455566656632 458899998875 87654 21 011 0001110011121 455666521 3577
Q ss_pred EEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEEcCCCceeeeeeee---ccCCcccce-EEe
Q 003791 158 AVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQINAMNGELLNHETAA---FSGGFVGDV-ALV 233 (795)
Q Consensus 158 ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald~~tG~~~w~~~v~---~~~~~~~~~-~~v 233 (795)
.+|..+. .|+.-.+.+.-......-...++.+|++|-..+.. .+..+|+.+++ |+..-. .|....+.+ +++
T Consensus 472 ~yd~~t~--~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~-~v~~yd~~t~~--W~~~~~~g~~p~~r~~~~a~v~ 546 (695)
T 2zwa_A 472 IFDMKTR--EWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP-AMLLYNVTEEI--FKDVTPKDEFFQNSLVSAGLEF 546 (695)
T ss_dssp EEETTTT--EEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC-SEEEEETTTTE--EEECCCSSGGGGSCCBSCEEEE
T ss_pred EEeCCCC--cEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC-CEEEEECCCCc--eEEccCCCCCCCcccceeEEEE
Confidence 8887775 57764332211001111112488999887543333 68899998864 776432 333333322 332
Q ss_pred c---CcEEEEEEC------CCCeEEEEEeecCe
Q 003791 234 S---SDTLVTLDT------TRSILVTVSFKNRK 257 (795)
Q Consensus 234 g---~~~lv~~d~------~~~~L~v~~l~sg~ 257 (795)
+ +.++++.-. ....+.+.|+.+++
T Consensus 547 ~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 547 DPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp ETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred eCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 3 224443311 12357777777654
No 315
>2zuy_A YESX protein; beta-propeller, lyase; 1.65A {Bacillus subtilis}
Probab=52.58 E-value=1.5e+02 Score=33.93 Aligned_cols=108 Identities=19% Similarity=0.260 Sum_probs=62.0
Q ss_pred CEEEEEECcCCccceEEEcCCccee----eeeeee----eCC-EEEEEEccC---------------------------C
Q 003791 63 NVIASLDLRHGEIFWRHVLGINDVV----DGIDIA----LGK-YVITLSSDG---------------------------S 106 (795)
Q Consensus 63 g~l~ALn~~tG~ivWR~~l~~~~~i----~~l~~~----~g~-~~V~Vs~~g---------------------------~ 106 (795)
..|.|++. +|+.+||..+...... ..+.+. .|. .+++.+.+| .
T Consensus 155 ~~l~aY~l-dG~~LW~idlg~Ni~aGahyt~~~V~DlDGDGkaEIvv~TadGt~dg~g~vigd~~~dyr~~~g~il~G~e 233 (620)
T 2zuy_A 155 VLIDAYKL-DGTFLWRINLGRNIRAGAHYTQFMVYDLDGDGKAEIAMKTADGTTDGKGHIIGDEQADFRNEQGRILSGPE 233 (620)
T ss_dssp CEEEEECT-TSCEEEEEECCTTSCCSTTSCCCEEECSSSSSSCEEEEEECTTCBCTTSCBCSCTTCCCBCTTSCBCSSCC
T ss_pred cEEEEEEC-CCCEEEEEcCCCCcccccccCceeEEEcCCCCcceEEEEccCCcccCcceeecccccccccccceEecCCe
Confidence 37899998 5999999998654110 011111 122 244433332 3
Q ss_pred eEEEEeCCCCcEeEEEeccCccc-----------cCC--ceeccccccccCCC-eEEEE----eCCEEEEEECCCCc--E
Q 003791 107 TLRAWNLPDGQMVWESFLRGSKH-----------SKP--LLLVPTNLKVDKDS-LILVS----SKGCLHAVSSIDGE--I 166 (795)
Q Consensus 107 ~v~A~d~~tG~llWe~~~~~~~~-----------s~~--~~~~~~~~~~~~~~-~V~V~----~~g~l~ald~~tG~--~ 166 (795)
.+..+|-.||+.+|......+.. ..+ ...++ ..++++ .+++. ....|.|+|..+|+ .
T Consensus 234 yL~vfdG~TG~~l~t~~~~p~rg~~~~WGD~yGnR~drf~~~va---yLDG~~Ps~v~~rG~Ytr~~v~A~d~~~g~L~~ 310 (620)
T 2zuy_A 234 YLTVFKGETGEALTTVEYEPPRGKLEDWGDGYGNRMDRFLAGTA---YLDGERPSLVMARGYYTRTVLVAYDFRNGRLKK 310 (620)
T ss_dssp EEEEEETTTCCEEEEEECSSCCCSGGGGTSSSSTTTTCEEEEEE---CTTCC-CEEEEEECSSSSCEEEEEEEETTEEEE
T ss_pred EEEEEcCCCcceeeecccCCCcCccccccccccccccccceeEE---ecCCCCceEEEecCcccceeEEEEEccCCceee
Confidence 58999999999999988743211 001 11111 122222 23332 14679999999995 7
Q ss_pred EEEEeccC
Q 003791 167 LWTRDFAA 174 (795)
Q Consensus 167 ~W~~~~~~ 174 (795)
+|++....
T Consensus 311 ~W~~ds~~ 318 (620)
T 2zuy_A 311 RWVFDSNQ 318 (620)
T ss_dssp EEEEETTS
T ss_pred eeEecCCC
Confidence 89998754
No 316
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=52.16 E-value=2.2e+02 Score=29.60 Aligned_cols=183 Identities=8% Similarity=-0.001 Sum_probs=82.8
Q ss_pred CCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEc-cCCeEEEEeCCCCcEeEEEeccCccccC
Q 003791 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSS-DGSTLRAWNLPDGQMVWESFLRGSKHSK 131 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~-~g~~v~A~d~~tG~llWe~~~~~~~~s~ 131 (795)
...++++.. +.|..+++...+ .+..+.......++.....++.+|++. .++.|+.+++..+...-- ...... .
T Consensus 44 ~~~ll~~~~-~~I~~i~~~g~~--~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~--~~~~~~-~ 117 (349)
T 3v64_C 44 EPVLLFANR-IDIRQVLPHRSE--YTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEV--VSTGLE-S 117 (349)
T ss_dssp CCEEEEECB-SCEEEECTTSCC--EEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE--ECSSCS-C
T ss_pred CceeEeecc-cceEEEeCCCCe--eEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEE--EeCCCC-C
Confidence 344665554 457888875443 233333222223332222445666654 456888888876542211 111100 0
Q ss_pred Cceecccccccc-CCCeEEEEe--CCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEE
Q 003791 132 PLLLVPTNLKVD-KDSLILVSS--KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQIN 208 (795)
Q Consensus 132 ~~~~~~~~~~~~-~~~~V~V~~--~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald 208 (795)
+..+ +.+ ..+.+|+.. .+.+..++.......-... ..-..|..+.....++.+|+..... .-++..++
T Consensus 118 p~gl-----avd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~--~~l~~P~~iavdp~~g~ly~td~~~--~~~I~r~~ 188 (349)
T 3v64_C 118 PGGL-----AVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW--QSLEKPRAIALHPMEGTIYWTDWGN--TPRIEASS 188 (349)
T ss_dssp CCEE-----EEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--TTCSCEEEEEEETTTTEEEEEECSS--SCEEEEEE
T ss_pred ccEE-----EEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEe--CCCCCcceEEEecCcCeEEEeccCC--CCEEEEEe
Confidence 0011 222 145666653 5688888865433222111 1111244443222467888755432 12677777
Q ss_pred cCCCceeeeeeeeccCCccc--ceEEe-cCcEEEEEECCCCeEEEEEee
Q 003791 209 AMNGELLNHETAAFSGGFVG--DVALV-SSDTLVTLDTTRSILVTVSFK 254 (795)
Q Consensus 209 ~~tG~~~w~~~v~~~~~~~~--~~~~v-g~~~lv~~d~~~~~L~v~~l~ 254 (795)
+. |...... ...++.. ...+- .++.++|+|...+.+.+.++.
T Consensus 189 ~d-G~~~~~~---~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~d 233 (349)
T 3v64_C 189 MD-GSGRRII---ADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD 233 (349)
T ss_dssp TT-SCSCEES---CCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CC-CCCcEEE---EECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence 64 4322111 1112211 11221 244556666665666666654
No 317
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=49.99 E-value=2.7e+02 Score=29.97 Aligned_cols=198 Identities=7% Similarity=0.061 Sum_probs=94.2
Q ss_pred CCEEEEEeCC-----CEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEc-cCCeEEEEeCCCCcEeEEEeccC
Q 003791 53 RKRVVVSTEE-----NVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSS-DGSTLRAWNLPDGQMVWESFLRG 126 (795)
Q Consensus 53 ~~~v~vat~~-----g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~-~g~~v~A~d~~tG~llWe~~~~~ 126 (795)
++.||++... ..+..+++ +|...++..+.......++.+...++.++++. ..++|+.+|+.++...-......
T Consensus 190 G~~lyvad~~~~~~~~~v~~~~~-~g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~ 268 (430)
T 3tc9_A 190 ADSMIITNDQNNNDRPNNYILTR-ESGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQD 268 (430)
T ss_dssp SSEEEEEECCSCTTSEEEEEEEG-GGTSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSS
T ss_pred CCEEEEEeCCCCcccceEEEEeC-CCceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCC
Confidence 4558888862 24666775 56655544443221122332222255666654 45799999998876521122221
Q ss_pred ccccCCceeccccccccCCCe-EEEEe--CCEEEEEECC--CCcE----EEEEeccC----------cce-eeeeEEEEe
Q 003791 127 SKHSKPLLLVPTNLKVDKDSL-ILVSS--KGCLHAVSSI--DGEI----LWTRDFAA----------ESV-EVQQVIQLD 186 (795)
Q Consensus 127 ~~~s~~~~~~~~~~~~~~~~~-V~V~~--~g~l~ald~~--tG~~----~W~~~~~~----------~~~-~~~~vv~s~ 186 (795)
... +..+ ..+.++. +++.. ++++++++.. +|+. .+.-.... ..+ .|.+.+...
T Consensus 269 ~~~--P~gi-----a~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~ 341 (430)
T 3tc9_A 269 SGW--EFHI-----QFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVK 341 (430)
T ss_dssp SSC--CEEE-----EECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEE
T ss_pred CCc--ceeE-----EEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEc
Confidence 111 1111 2233444 77763 7888887643 3432 11111000 001 233222111
Q ss_pred --------cCCEEEEEEecCCceeEEEEEEcCCCceeeeeeeec--cCC-----cccceEEecCcEEEEEECCCCeEEEE
Q 003791 187 --------ESDQIYVVGYAGSSQFHAYQINAMNGELLNHETAAF--SGG-----FVGDVALVSSDTLVTLDTTRSILVTV 251 (795)
Q Consensus 187 --------~~~~Vyvv~~~g~~~~~v~ald~~tG~~~w~~~v~~--~~~-----~~~~~~~vg~~~lv~~d~~~~~L~v~ 251 (795)
..+.+|+....++ ++..+| .+|+...-.-... ..+ .....-| ....=+|+|+.++.|++.
T Consensus 342 ~~~y~~~D~~g~lyvaD~~n~---~I~~i~-~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~-~~P~giavd~~~g~lyVa 416 (430)
T 3tc9_A 342 NPAYKGSSDEYDFYFCDRENH---CIRILT-PQGRVTTFAGRGSNGTSGYNDGDLRQEARF-NHPEGIVYDEERECFFIG 416 (430)
T ss_dssp CGGGTTSSCCEEEEEEEGGGT---EEEEEC-TTSEEEEEEECCTTSSSSCBCEETTTTCBC-SSEEEEEEETTTTEEEEE
T ss_pred cccccccCCCCeEEEEECCCc---EEEEEC-CCCcEEEEEeCCCCCCCcccCCCchhhcEe-CCCcEEEEECCCCEEEEE
Confidence 2367887654433 677788 4675442221100 001 0000001 123446777656788888
Q ss_pred EeecCeeeeEEEee
Q 003791 252 SFKNRKIAFQETHL 265 (795)
Q Consensus 252 ~l~sg~~~~~~~~l 265 (795)
|..+.+ ++.+.+
T Consensus 417 D~~n~r--Ir~i~~ 428 (430)
T 3tc9_A 417 DRENRR--IRKIGY 428 (430)
T ss_dssp EGGGTE--EEEEEE
T ss_pred ECCCCe--EEEEcc
Confidence 877776 455543
No 318
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=47.46 E-value=24 Score=30.70 Aligned_cols=39 Identities=23% Similarity=0.385 Sum_probs=30.7
Q ss_pred eccCCceEEEEEEcCCCCCCCCCCCCCCcEEEEEEEEceeeeEEEEEEeCCC
Q 003791 703 KYISKNLLFVATVAPKASGHIGSADPDEAWLVVYLIDTITGRILHRMTHHGA 754 (795)
Q Consensus 703 KYLNPNL~~v~t~~~~~~~~~g~~~~~~~~l~vyLiD~VTG~il~s~~h~~~ 754 (795)
-||+= ++.|--.+. .+.++|.++|.-||+++|+..+.+.
T Consensus 30 A~I~n-vlsV~F~~~------------~~~vTItItNe~TG~~VYs~~~s~p 68 (101)
T 3sd2_A 30 AILSN-ILNVSFGRA------------KDYAIITVTNKATGEIVHSKTYHNT 68 (101)
T ss_dssp EEETT-EEEEEESSC------------CSCEEEEEEETTTCCEEEEEEESSC
T ss_pred EEEeC-EEEEEeccC------------CCcEEEEEEECCCCcEEEEEeccCC
Confidence 46665 555555443 4799999999999999999999983
No 319
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=47.04 E-value=3.8e+02 Score=30.81 Aligned_cols=65 Identities=6% Similarity=-0.000 Sum_probs=40.5
Q ss_pred ccCCCEEEEEeCC---------CEEEEEECcCCccceEEEcCC-cceeeeee-eeeCCEEEEEEccCCeEEEEeCCCCcE
Q 003791 50 KTGRKRVVVSTEE---------NVIASLDLRHGEIFWRHVLGI-NDVVDGID-IALGKYVITLSSDGSTLRAWNLPDGQM 118 (795)
Q Consensus 50 ~~~~~~v~vat~~---------g~l~ALn~~tG~ivWR~~l~~-~~~i~~l~-~~~g~~~V~Vs~~g~~v~A~d~~tG~l 118 (795)
+++++.|++++++ +.++-+|.++|+..- +.. ...+.... -+.|+.+++++ ++.|+.||..+|..
T Consensus 70 Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~---l~~~~~~~~~~~~SPdG~~la~~~--~~~i~~~~~~~~~~ 144 (740)
T 4a5s_A 70 SPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLIT---EERIPNNTQWVTWSPVGHKLAYVW--NNDIYVKIEPNLPS 144 (740)
T ss_dssp CTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC---SSCCCTTEEEEEECSSTTCEEEEE--TTEEEEESSTTSCC
T ss_pred CCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEE---cccCCCcceeeEECCCCCEEEEEE--CCeEEEEECCCCce
Confidence 4556667777764 667789999998542 322 22122111 13566777764 35899999998874
Q ss_pred e
Q 003791 119 V 119 (795)
Q Consensus 119 l 119 (795)
.
T Consensus 145 ~ 145 (740)
T 4a5s_A 145 Y 145 (740)
T ss_dssp E
T ss_pred E
Confidence 3
No 320
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=42.55 E-value=32 Score=34.64 Aligned_cols=104 Identities=12% Similarity=0.005 Sum_probs=51.9
Q ss_pred CCEEEEEeCCCEEEEEEC-cCCccceEEEcCCcc------eeeeeeeeeCCEEEEEEccCCeEEEEeCC-CCcEeEEEec
Q 003791 53 RKRVVVSTEENVIASLDL-RHGEIFWRHVLGIND------VVDGIDIALGKYVITLSSDGSTLRAWNLP-DGQMVWESFL 124 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~-~tG~ivWR~~l~~~~------~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~-tG~llWe~~~ 124 (795)
++.||+. .+|.|+..++ .++...|.-. +... ....+ ....++.+|++++ ++|+-+++. +|.--|-..
T Consensus 51 ~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s-~t~IG~~Gw~~F~a~-~fD~~G~LYav~d-G~iyr~~pP~~~~~~Wl~~- 125 (236)
T 1tl2_A 51 GGELYGV-LNDKIYKGTPPTHDNDNWMGR-AKKIGNGGWNQFQFL-FFDPNGYLYAVSK-DKLYKASPPQSDTDNWIAR- 125 (236)
T ss_dssp TSCEEEE-ETTEEEEESCCCSTTCCHHHH-CEEEECSCGGGCSEE-EECTTSCEEEEET-TEEEEESCCCSTTCCHHHH-
T ss_pred CccEEEE-eCCeEEEECCCCCCccccccc-ccEecccccccceEE-EECCCCCEEEeCC-CEEEEeCCCcCCCCceecc-
Confidence 6678888 7888888888 4566777643 2210 01112 2334555555543 466666653 344444322
Q ss_pred cCccccCCceeccccccccCCCeEEEEeCCEEEEEECCCCcEEEEEecc
Q 003791 125 RGSKHSKPLLLVPTNLKVDKDSLILVSSKGCLHAVSSIDGEILWTRDFA 173 (795)
Q Consensus 125 ~~~~~s~~~~~~~~~~~~~~~~~V~V~~~g~l~ald~~tG~~~W~~~~~ 173 (795)
+ ..++.. -...-..|+...+|.|+|+. +|+. ++...|
T Consensus 126 -a-------~~vg~~-gw~~~~~lff~p~G~Lyav~--dg~l-yr~~~P 162 (236)
T 1tl2_A 126 -A-------TEVGSG-GWSGFKFLFFHPNGYLYAVH--GQQF-YKALPP 162 (236)
T ss_dssp -S-------EEEECS-SGGGEEEEEECTTSCEEEEE--TTEE-EEECCC
T ss_pred -c-------cEeccC-CCCceEEEEECCCceEEEEe--CCcE-EecCCC
Confidence 0 111100 00001122333589999998 7773 334344
No 321
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=42.16 E-value=4.7e+02 Score=30.41 Aligned_cols=137 Identities=10% Similarity=0.029 Sum_probs=64.0
Q ss_pred EEEEEECcCC-ccceEEEcCCcceeeeeee-eeCCEEEEEEccC----CeEEEEeCCCCc----EeEEEeccCccccCCc
Q 003791 64 VIASLDLRHG-EIFWRHVLGINDVVDGIDI-ALGKYVITLSSDG----STLRAWNLPDGQ----MVWESFLRGSKHSKPL 133 (795)
Q Consensus 64 ~l~ALn~~tG-~ivWR~~l~~~~~i~~l~~-~~g~~~V~Vs~~g----~~v~A~d~~tG~----llWe~~~~~~~~s~~~ 133 (795)
.|+.+|..+| +.+=. .++ ....+..- ..++.++|++.+. ..|+.++..+|. ++++..-. .....+
T Consensus 202 ~l~v~dl~~g~~~l~~-~~~--~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~--~~~~~~ 276 (751)
T 2xe4_A 202 TIEFKRISDPSQTIAD-KVS--GTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNP--LFSAFM 276 (751)
T ss_dssp EEEEEETTCTTCCCCC-CEE--EECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCT--TCEEEE
T ss_pred EEEEEECCCCCEeCCc-ccc--CceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCC--ceEEEE
Confidence 4888888888 63210 000 00111111 2455677765421 368888887763 44442211 110011
Q ss_pred eeccccccccCCCeEEEEe----CCEEEEEECCCCcEEE--EEeccCcceeeeeEEEEecCCEEEEEEecC-CceeEEEE
Q 003791 134 LLVPTNLKVDKDSLILVSS----KGCLHAVSSIDGEILW--TRDFAAESVEVQQVIQLDESDQIYVVGYAG-SSQFHAYQ 206 (795)
Q Consensus 134 ~~~~~~~~~~~~~~V~V~~----~g~l~ald~~tG~~~W--~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g-~~~~~v~a 206 (795)
.. ..+ ++.+++.. ...|+.+|..+|...+ +.-.+........+ .-..++.+|+.+..+ ..+.+++.
T Consensus 277 ~~-----SpD-g~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~-~~~~g~~l~~~t~~~~a~~~~L~~ 349 (751)
T 2xe4_A 277 YK-----AAD-TNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDV-QMHGTSHLVILTNEGGAVNHKLLI 349 (751)
T ss_dssp EE-----CTT-SSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEE-EEETTTEEEEEECTTTCTTCEEEE
T ss_pred EE-----CCC-CCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEE-eeeeCCEEEEEeCCCCCCCcEEEE
Confidence 11 122 23344432 4578888887763223 22111111101111 002377788777654 34568899
Q ss_pred EEcCCC
Q 003791 207 INAMNG 212 (795)
Q Consensus 207 ld~~tG 212 (795)
+|..++
T Consensus 350 ~d~~~~ 355 (751)
T 2xe4_A 350 APRGQP 355 (751)
T ss_dssp EETTST
T ss_pred EcCCCc
Confidence 998764
No 322
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=42.04 E-value=4.5e+02 Score=30.19 Aligned_cols=102 Identities=9% Similarity=-0.002 Sum_probs=53.8
Q ss_pred CCEEEEEeCCCEEEEEECcCCccceEEEcCCcc----eeee--eee-eeCCEEEEEEccC--------CeEEEEeCCCCc
Q 003791 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGIND----VVDG--IDI-ALGKYVITLSSDG--------STLRAWNLPDGQ 117 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~----~i~~--l~~-~~g~~~V~Vs~~g--------~~v~A~d~~tG~ 117 (795)
++.+++.+ +|.|...|.++|+. ++.+.... .+.. ... +.|+.+++.+... +.++.||..+|+
T Consensus 27 dg~~~~~~-~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~ 103 (740)
T 4a5s_A 27 DHEYLYKQ-ENNILVFNAEYGNS--SVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQ 103 (740)
T ss_dssp SSEEEEEE-TTEEEEEETTTCCE--EEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE
T ss_pred CCcEEEEc-CCcEEEEECCCCce--EEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCc
Confidence 44444444 89999999999986 33333321 0101 111 2344455544321 467799999998
Q ss_pred EeEEEeccCcc-ccCCceeccccccccCCCeEEEEeCCEEEEEECCCCcE
Q 003791 118 MVWESFLRGSK-HSKPLLLVPTNLKVDKDSLILVSSKGCLHAVSSIDGEI 166 (795)
Q Consensus 118 llWe~~~~~~~-~s~~~~~~~~~~~~~~~~~V~V~~~g~l~ald~~tG~~ 166 (795)
..- +.... ....+.. .++ ++.++...++.|+..+..+|+.
T Consensus 104 ~~~---l~~~~~~~~~~~~-----SPd-G~~la~~~~~~i~~~~~~~~~~ 144 (740)
T 4a5s_A 104 LIT---EERIPNNTQWVTW-----SPV-GHKLAYVWNNDIYVKIEPNLPS 144 (740)
T ss_dssp ECC---SSCCCTTEEEEEE-----CSS-TTCEEEEETTEEEEESSTTSCC
T ss_pred EEE---cccCCCcceeeEE-----CCC-CCEEEEEECCeEEEEECCCCce
Confidence 652 22211 0011112 223 2333333678888888877763
No 323
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=41.09 E-value=3.3e+02 Score=28.29 Aligned_cols=185 Identities=15% Similarity=0.065 Sum_probs=87.8
Q ss_pred CCEEEEEe-CCCEEEEEECcCCccceEEEcCCc-ceeeeeeeeeCCEEEEEEc-cCCeEEEEeCCCCcEeEEEeccCccc
Q 003791 53 RKRVVVST-EENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIALGKYVITLSS-DGSTLRAWNLPDGQMVWESFLRGSKH 129 (795)
Q Consensus 53 ~~~v~vat-~~g~l~ALn~~tG~ivWR~~l~~~-~~i~~l~~~~g~~~V~Vs~-~g~~v~A~d~~tG~llWe~~~~~~~~ 129 (795)
+++||+++ ..+.|..+++..+.. +...... ....++.+.-.++.+|++. ..+.|..++.. |...-. .+.. .+
T Consensus 84 ~~~ly~~D~~~~~I~r~~~~g~~~--~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~d-G~~~~~-l~~~-~l 158 (349)
T 3v64_C 84 RELVFWSDVTLDRILRANLNGSNV--EEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLD-GAHRKV-LLWQ-SL 158 (349)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSC--EEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT-SCSCEE-EECT-TC
T ss_pred ccEEEEEeccCCceEEEecCCCCc--eEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCC-CCceEE-EEeC-CC
Confidence 56777776 356777787765542 1112111 1122442221244555543 34678888875 432211 1111 11
Q ss_pred cCCceecccccccc-CCCeEEEEe--C-CEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEE
Q 003791 130 SKPLLLVPTNLKVD-KDSLILVSS--K-GCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAY 205 (795)
Q Consensus 130 s~~~~~~~~~~~~~-~~~~V~V~~--~-g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ 205 (795)
..+.- .+++ ..+.+|+.. . +.|++++.. |..+-..- ...-..|..+.....++.+|+.....+ ++.
T Consensus 159 -~~P~~----iavdp~~g~ly~td~~~~~~I~r~~~d-G~~~~~~~-~~~~~~PnGla~d~~~~~lY~aD~~~~---~I~ 228 (349)
T 3v64_C 159 -EKPRA----IALHPMEGTIYWTDWGNTPRIEASSMD-GSGRRIIA-DTHLFWPNGLTIDYAGRRMYWVDAKHH---VIE 228 (349)
T ss_dssp -SCEEE----EEEETTTTEEEEEECSSSCEEEEEETT-SCSCEESC-CSSCSCEEEEEEETTTTEEEEEETTTT---EEE
T ss_pred -CCcce----EEEecCcCeEEEeccCCCCEEEEEeCC-CCCcEEEE-ECCCCCcceEEEeCCCCEEEEEECCCC---EEE
Confidence 00101 1223 146677653 3 778888754 43221111 111111334432235788998654433 678
Q ss_pred EEEcCCCceeeeeeeeccCCccc--ceEEecCcEEEEEECCCCeEEEEEeecCe
Q 003791 206 QINAMNGELLNHETAAFSGGFVG--DVALVSSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 206 ald~~tG~~~w~~~v~~~~~~~~--~~~~vg~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
.+|.. |...... ...++.. ... +.++.++|+|..++.+...+-.+|+
T Consensus 229 ~~~~d-G~~~~~~---~~~~~~~P~gia-v~~~~ly~td~~~~~V~~~~~~~G~ 277 (349)
T 3v64_C 229 RANLD-GSHRKAV---ISQGLPHPFAIT-VFEDSLYWTDWHTKSINSANKFTGK 277 (349)
T ss_dssp EEETT-SCSCEEE---ECSSCSSEEEEE-EETTEEEEEETTTTEEEEEETTTCC
T ss_pred EEeCC-CCceEEE---EeCCCCCceEEE-EECCEEEEecCCCCeEEEEEccCCC
Confidence 88865 4322111 1111211 122 2556777888887888877755555
No 324
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=39.52 E-value=1.5e+02 Score=25.80 Aligned_cols=60 Identities=12% Similarity=0.064 Sum_probs=36.0
Q ss_pred CEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEec
Q 003791 54 KRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFL 124 (795)
Q Consensus 54 ~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~ 124 (795)
...+....+|.|.-.+...|.++|.-...... ....+.+..+ |.+..+|. +|..+|+...
T Consensus 25 ~~~L~~q~dGNLvL~~~~~~~~vWssnt~~~~---------~~~~l~l~~d-GNLVl~d~-~~~~iW~S~t 84 (113)
T 3mez_B 25 DYSLVMRDDCNLVLTKGSKTNIVWESGTSGRG---------QHCFMRLGHS-GELDITDD-RLNTVFVSNT 84 (113)
T ss_dssp TEEEEECTTSCEEEEETTTTEEEEECCCTTSC---------SSCEEEECTT-SCEEEECT-TSCEEEECSC
T ss_pred CEEEEEcCCCEEEEEECCCCEEEEECCcccCC---------cCEEEEEeCC-CcEEEECC-CCCEEEECCC
Confidence 34555567777777776568999985443221 0112333443 46777775 6788998654
No 325
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=38.75 E-value=1.3e+02 Score=32.16 Aligned_cols=63 Identities=11% Similarity=0.096 Sum_probs=44.1
Q ss_pred CCCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCC
Q 003791 52 GRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPD 115 (795)
Q Consensus 52 ~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~t 115 (795)
..+.||+.|..|.|+-+|..||..+.+.....+.-+....-...++++.|... |.|.....+.
T Consensus 270 kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~-GqVl~v~v~~ 332 (365)
T 2xzh_A 270 KHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRK-GQVLSVCVEE 332 (365)
T ss_dssp TTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETT-CEEEEEEECT
T ss_pred cCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCC-CEEEEEEECc
Confidence 46779999999999999999999999999987632222211234566666643 4666655543
No 326
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=38.75 E-value=1.5e+02 Score=25.43 Aligned_cols=57 Identities=18% Similarity=0.348 Sum_probs=32.6
Q ss_pred EEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEecc
Q 003791 57 VVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLR 125 (795)
Q Consensus 57 ~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~ 125 (795)
++--.+|-|.-.+ .+.++|.-....+.. ..-.+.+..+ |.+..+|. +|+.+|.....
T Consensus 23 l~~q~DgNLvly~--~~~~vW~ant~~~~~--------~~~~L~l~~d-GnLvL~d~-~~~~vWss~t~ 79 (105)
T 4h3o_A 23 FIMQDDCNLVLYD--HSTSTWASNTEIGGK--------SGCSAVLQSD-GNFVVYDS-SGRSLWASHST 79 (105)
T ss_dssp EEECTTSCEEEEE--TTEEEEECCCCCTTC--------CSCEEEECTT-SCEEEECT-TCCEEEECCCC
T ss_pred EEECCCCeEEEEE--CCEEEEEecCCCCCC--------ccEEEEEeCC-ccEEEECC-CcEEEEEecCC
Confidence 3344555555555 467899865543311 1113444554 46777775 68999986543
No 327
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A
Probab=38.61 E-value=1.9e+02 Score=24.88 Aligned_cols=52 Identities=13% Similarity=0.276 Sum_probs=30.3
Q ss_pred EeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEec
Q 003791 59 STEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFL 124 (795)
Q Consensus 59 at~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~ 124 (795)
-..+|.+.-.+. |.++|.-...... ....+.+..+ |.+..+| +|..+|+...
T Consensus 25 ~~~dgnlvl~~~--~~~vW~sn~~~~~---------~~~~l~l~~~-GNLvl~d--~~~~~W~S~~ 76 (112)
T 1xd5_A 25 IQNDCNLVLYDN--NRAVWASGTNGKA---------SGCVLKMQND-GNLVIYS--GSRAIWASNT 76 (112)
T ss_dssp ECTTSCEEEEET--TEEEEECCCTTSC---------SSEEEEECTT-SCEEEEE--TTEEEEECCC
T ss_pred EcCCCcEEEEEC--CEEEEeCCCcCCC---------CCEEEEEeCC-CCEEEEc--CCEEEEECCc
Confidence 344555555564 7899986543210 1123444444 4677778 7889999653
No 328
>3d33_A Domain of unknown function with AN immunoglobulin beta-sandwich fold; structural genomics, joint center for structural genomics; HET: MSE; 1.70A {Bacteroides vulgatus atcc 8482}
Probab=37.05 E-value=54 Score=28.88 Aligned_cols=41 Identities=12% Similarity=0.201 Sum_probs=31.4
Q ss_pred eeccCCceEEEEEEcCCCCCCCCCCCCCCcEEEEEEEEceeeeEEEEEEeCCC
Q 003791 702 YKYISKNLLFVATVAPKASGHIGSADPDEAWLVVYLIDTITGRILHRMTHHGA 754 (795)
Q Consensus 702 YKYLNPNL~~v~t~~~~~~~~~g~~~~~~~~l~vyLiD~VTG~il~s~~h~~~ 754 (795)
.-|++=|++.|--.++ -..++|.+.|.-+|+++|+..+...
T Consensus 32 ~A~id~~~L~I~F~~~------------~~~vtItI~~~~tG~iVY~~~v~~~ 72 (108)
T 3d33_A 32 TVFTDGYLLTLKNASP------------DRDMTIRITDMAKGGVVYENDIPEV 72 (108)
T ss_dssp EEEEETTEEEEEESSC------------CSEEEEEEEETTTCCEEEEEEECGG
T ss_pred EEEEECCEEEEEECCc------------CCCEEEEEEECCCCcEEEEEeecCC
Confidence 3455556666655544 3799999999999999999999875
No 329
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=37.02 E-value=91 Score=27.22 Aligned_cols=63 Identities=17% Similarity=0.268 Sum_probs=38.9
Q ss_pred eeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccCCceeccccccccCCCeEEEEeCCEEEEEECCCCcEEEEEec
Q 003791 93 ALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSSKGCLHAVSSIDGEILWTRDF 172 (795)
Q Consensus 93 ~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~~~g~l~ald~~tG~~~W~~~~ 172 (795)
..+...+.+..+| .+..++...|..+|......... ...+.+..+|.|.-+|. +|+++|+...
T Consensus 22 ~~g~~~L~~q~dG-NLvL~~~~~~~~vWssnt~~~~~---------------~~~l~l~~dGNLVl~d~-~~~~iW~S~t 84 (113)
T 3mez_B 22 ATRDYSLVMRDDC-NLVLTKGSKTNIVWESGTSGRGQ---------------HCFMRLGHSGELDITDD-RLNTVFVSNT 84 (113)
T ss_dssp EETTEEEEECTTS-CEEEEETTTTEEEEECCCTTSCS---------------SCEEEECTTSCEEEECT-TSCEEEECSC
T ss_pred EcCCEEEEEcCCC-EEEEEECCCCEEEEECCcccCCc---------------CEEEEEeCCCcEEEECC-CCCEEEECCC
Confidence 3466667766654 67778876689999966432110 11122224677777764 6789998654
No 330
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=36.98 E-value=3.5e+02 Score=27.47 Aligned_cols=181 Identities=12% Similarity=0.060 Sum_probs=85.0
Q ss_pred EEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEc-cCCeEEEEeCCC---CcEeEEEeccCccccC
Q 003791 56 VVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSS-DGSTLRAWNLPD---GQMVWESFLRGSKHSK 131 (795)
Q Consensus 56 v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~-~g~~v~A~d~~t---G~llWe~~~~~~~~s~ 131 (795)
|++++. +.|..+|..+++.. ..++......++.....++.+|++. .++.|+.+++.+ |... +..+... +..
T Consensus 4 ll~~~~-~~I~~i~~~~~~~~--~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~-~~~~~~~-~~~ 78 (316)
T 1ijq_A 4 LFFTNR-HEVRKMTLDRSEYT--SLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSY-DTVISRD-IQA 78 (316)
T ss_dssp EEEECB-SSEEEEETTSCCCE--EEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------C-EEEECSS-CSC
T ss_pred EEEECC-CeEEEEECCCcceE--ehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCccc-EEEEeCC-CCC
Confidence 555554 45788898877643 2222222223332222345666654 457899999875 1211 1111111 101
Q ss_pred Cceecccccccc-CCCeEEEEe--CCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEEEEEE
Q 003791 132 PLLLVPTNLKVD-KDSLILVSS--KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHAYQIN 208 (795)
Q Consensus 132 ~~~~~~~~~~~~-~~~~V~V~~--~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v~ald 208 (795)
+..+ +.+ .++.+|+.. .+.+..++........-.... ...|..+.....++.+|+..... .-++..++
T Consensus 79 p~gl-----avd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~--~~~P~~iavdp~~g~ly~~d~~~--~~~I~~~~ 149 (316)
T 1ijq_A 79 PDGL-----AVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREN--GSKPRAIVVDPVHGFMYWTDWGT--PAKIKKGG 149 (316)
T ss_dssp CCEE-----EEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECT--TCCEEEEEEETTTTEEEEEECSS--SCEEEEEE
T ss_pred cCEE-----EEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECC--CCCcceEEeCCCCCEEEEEccCC--CCeEEEEc
Confidence 1111 222 246677763 678888887644433322211 11244443222477888765432 12677777
Q ss_pred cCCCceeeeeeeeccCCccc--ceEEe-cCcEEEEEECCCCeEEEEEee
Q 003791 209 AMNGELLNHETAAFSGGFVG--DVALV-SSDTLVTLDTTRSILVTVSFK 254 (795)
Q Consensus 209 ~~tG~~~w~~~v~~~~~~~~--~~~~v-g~~~lv~~d~~~~~L~v~~l~ 254 (795)
+ +|...... . ...+.. ...+- .++.++|+|..++.+.+.++.
T Consensus 150 ~-dG~~~~~~--~-~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~d 194 (316)
T 1ijq_A 150 L-NGVDIYSL--V-TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 194 (316)
T ss_dssp T-TSCCEEEE--E-CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred C-CCCCeEEE--E-ECCCCCceEEEEeccCCEEEEEECCCCeEEEEecC
Confidence 6 45433221 0 111211 12221 345666777766677777765
No 331
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=36.40 E-value=1.8e+02 Score=29.30 Aligned_cols=63 Identities=5% Similarity=0.010 Sum_probs=34.2
Q ss_pred EEEEEccCCeEEEEeCCCCcE--eEEEeccCccccCCceeccccccccCCCeEEEE-eCCEEEEEECCCCc
Q 003791 98 VITLSSDGSTLRAWNLPDGQM--VWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGE 165 (795)
Q Consensus 98 ~V~Vs~~g~~v~A~d~~tG~l--lWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~ 165 (795)
.++.++.++.|+.||..+|.. +.......... ..+.+.+ ...+..++.. .|+.+...|..+|+
T Consensus 27 ~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V-~~v~~~~----~~~~~~l~s~s~D~~v~iWd~~~~~ 92 (316)
T 3bg1_A 27 RLATCSSDRSVKIFDVRNGGQILIADLRGHEGPV-WQVAWAH----PMYGNILASCSYDRKVIIWREENGT 92 (316)
T ss_dssp EEEEEETTTEEEEEEEETTEEEEEEEEECCSSCE-EEEEECC----GGGSSCEEEEETTSCEEEECCSSSC
T ss_pred EEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccE-EEEEeCC----CCCCCEEEEEECCCEEEEEECCCCc
Confidence 444455678999999999864 33333332221 1111111 0112334434 38888888888874
No 332
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*
Probab=34.33 E-value=79 Score=27.45 Aligned_cols=59 Identities=17% Similarity=0.384 Sum_probs=34.9
Q ss_pred eCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccCCceeccccccccCCCeEEEEeCCEEEEEECCCCcEEEEEe
Q 003791 94 LGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSSKGCLHAVSSIDGEILWTRD 171 (795)
Q Consensus 94 ~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~~~g~l~ald~~tG~~~W~~~ 171 (795)
.+...+.+..+| .+..+| .|..+|......... ...+.+..+|.|..+|. +|+++|+..
T Consensus 19 ~~~~~l~~~~dG-nlvl~~--~~~~vW~sn~~~~~~---------------~~~l~l~~dGNLVl~~~-~~~~~W~S~ 77 (110)
T 3a0c_A 19 GPSYRLIMQGDC-NFVLYD--SGKPVWASNTGGLGS---------------GCRLTLHNNGNLVIYDQ-SNRVIWQTK 77 (110)
T ss_dssp TTTEEEEECTTS-CEEEEE--TTEEEEECCCTTSCS---------------SCEEEECTTSCEEEECT-TCCEEEECC
T ss_pred CCCEEEEEcCCC-cEEEEE--CCEEEEECCCCCCCC---------------cEEEEEeCCCCEEEECC-CCcEEEecC
Confidence 344455555544 566777 488999876543210 11222235777777774 688999854
No 333
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*
Probab=32.98 E-value=2.3e+02 Score=24.29 Aligned_cols=56 Identities=14% Similarity=0.331 Sum_probs=33.3
Q ss_pred EEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEecc
Q 003791 57 VVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLR 125 (795)
Q Consensus 57 ~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~ 125 (795)
+.-..+|.+.-.| .|.++|.-...... ....+.+..+ |.+..+|. +|..+|+....
T Consensus 24 l~~~~dGnlvl~~--~~~~vW~sn~~~~~---------~~~~l~l~~d-GNLVl~~~-~~~~~W~S~t~ 79 (110)
T 3a0c_A 24 LIMQGDCNFVLYD--SGKPVWASNTGGLG---------SGCRLTLHNN-GNLVIYDQ-SNRVIWQTKTN 79 (110)
T ss_dssp EEECTTSCEEEEE--TTEEEEECCCTTSC---------SSCEEEECTT-SCEEEECT-TCCEEEECCCC
T ss_pred EEEcCCCcEEEEE--CCEEEEECCCCCCC---------CcEEEEEeCC-CCEEEECC-CCcEEEecCCC
Confidence 3345566666666 48899986553221 1123444444 46777775 68999996543
No 334
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=32.08 E-value=2.4e+02 Score=24.09 Aligned_cols=62 Identities=16% Similarity=0.302 Sum_probs=37.7
Q ss_pred eeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccCCceeccccccccCCCeEEEEeCCEEEEEECCCCcEEEEEec
Q 003791 93 ALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVSSKGCLHAVSSIDGEILWTRDF 172 (795)
Q Consensus 93 ~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~~~g~l~ald~~tG~~~W~~~~ 172 (795)
..+...+.+..+| .+..++ .+..+|......+.. . ...+.+..+|.|..+| .+|+++|....
T Consensus 17 ~sg~y~l~~q~Dg-NLvly~--~~~~vW~ant~~~~~--~------------~~~L~l~~dGnLvL~d-~~~~~vWss~t 78 (105)
T 4h3o_A 17 DVEPYHFIMQDDC-NLVLYD--HSTSTWASNTEIGGK--S------------GCSAVLQSDGNFVVYD-SSGRSLWASHS 78 (105)
T ss_dssp EETTEEEEECTTS-CEEEEE--TTEEEEECCCCCTTC--C------------SCEEEECTTSCEEEEC-TTCCEEEECCC
T ss_pred EECCEEEEECCCC-eEEEEE--CCEEEEEecCCCCCC--c------------cEEEEEeCCccEEEEC-CCcEEEEEecC
Confidence 3466666666654 677776 467899877554321 0 1122223577777777 56889998654
No 335
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=30.69 E-value=6.4e+02 Score=28.62 Aligned_cols=186 Identities=11% Similarity=0.028 Sum_probs=89.9
Q ss_pred CCCEEEEEeC-CCEEEEEECcCCccceEEEcCCc-ceeeeeeeeeCCEEEEEEc-cCCeEEEEeCCCCcEeEEEeccCcc
Q 003791 52 GRKRVVVSTE-ENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIALGKYVITLSS-DGSTLRAWNLPDGQMVWESFLRGSK 128 (795)
Q Consensus 52 ~~~~v~vat~-~g~l~ALn~~tG~ivWR~~l~~~-~~i~~l~~~~g~~~V~Vs~-~g~~v~A~d~~tG~llWe~~~~~~~ 128 (795)
.+++||+++- .+.|..+++. |.-.+...+..+ ....++.+--.++.+|++. ..+.|...++. |...=. +....
T Consensus 50 ~~~~ly~sD~~~~~I~r~~~~-g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~d-G~~~~~--l~~~~ 125 (619)
T 3s94_A 50 SHGLIYWSDVSEEAIKRTEFN-KTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLD-GSLRKV--LFWQE 125 (619)
T ss_dssp TTTEEEEEETTTTEEEEEEC------CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCSCEE--EECSS
T ss_pred CCCEEEEEECCCCeEEEEEcc-CCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECC-CCCEEE--EEeCC
Confidence 3778998875 5788888875 443344444433 2234553222234555543 45688888875 432211 11111
Q ss_pred ccCCceeccccccccC-CCeEEEEe---CCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEE
Q 003791 129 HSKPLLLVPTNLKVDK-DSLILVSS---KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHA 204 (795)
Q Consensus 129 ~s~~~~~~~~~~~~~~-~~~V~V~~---~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v 204 (795)
+.. |...+.+. .+.+|+.. .+.+.+.+. +|..+=..-..... .|..+......+.+|+.....+ ++
T Consensus 126 l~~-----P~~Iavdp~~g~ly~tD~g~~~~I~r~~~-dG~~~~~l~~~~~~-~P~Glald~~~~~LY~aD~~~~---~I 195 (619)
T 3s94_A 126 LDQ-----PRAIALDPSSGFMYWTDWGEVPKIERAGM-DGSSRFIIINSEIY-WPNGLTLDYEEQKLYWADAKLN---FI 195 (619)
T ss_dssp CSC-----CCCEEEETTTTEEEEEECSSSCEEEEEET-TSCSCEEEECSSCS-SEEEEEEETTTTEEEEEETTTC---CE
T ss_pred CCC-----CceEEEecCCCeEEEeccCCCCEEEEEEC-CCCceEEEEeCCCC-CCcEEEEEccCCEEEEEeCCCC---eE
Confidence 101 10112222 35566653 356666664 33322111111111 1334432234688887643332 56
Q ss_pred EEEEcCCCceeeeee---eeccCCcccceEEecCcEEEEEECCCCeEEEEEeecCe
Q 003791 205 YQINAMNGELLNHET---AAFSGGFVGDVALVSSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 205 ~ald~~tG~~~w~~~---v~~~~~~~~~~~~vg~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
..+|.. |....... +..|.+ .- +..+.++|+|..++.+.+++..+|+
T Consensus 196 ~~~~~d-G~~~~~~~~~~~~~P~g----i~-~~~~~ly~td~~~~~V~~~d~~tg~ 245 (619)
T 3s94_A 196 HKSNLD-GTNRQAVVKGSLPHPFA----LT-LFEDILYWTDWSTHSILACNKYTGE 245 (619)
T ss_dssp EEESSS-CCEEC---------CCC----EE-ESSSEEEEECTTTCSEEEEESSSCC
T ss_pred EEecCC-CCccEEEEeCCCCCceE----EE-EeCCEEEEecCCCCEEEEEECCCCc
Confidence 777764 43332221 111221 22 3455888999888999999988876
No 336
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=30.63 E-value=1.9e+02 Score=32.18 Aligned_cols=63 Identities=11% Similarity=0.082 Sum_probs=42.4
Q ss_pred cCCCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCC
Q 003791 51 TGRKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLP 114 (795)
Q Consensus 51 ~~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~ 114 (795)
...+.||+.|..|.++-+|..||..+.+........+....-...+|++.|... |.|.....+
T Consensus 268 ~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~-GqVl~v~v~ 330 (494)
T 1bpo_A 268 EKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRK-GQVLSVCVE 330 (494)
T ss_dssp TTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETT-CEEEEEEEC
T ss_pred ccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccC-ceEEEEEEc
Confidence 346779999999999999999999999999876632222211234555555543 355555444
No 337
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=26.76 E-value=4.2e+02 Score=26.47 Aligned_cols=29 Identities=21% Similarity=0.231 Sum_probs=19.0
Q ss_pred cCCCeEEEEeCCEEEEEEC-CCCcEEEEEe
Q 003791 143 DKDSLILVSSKGCLHAVSS-IDGEILWTRD 171 (795)
Q Consensus 143 ~~~~~V~V~~~g~l~ald~-~tG~~~W~~~ 171 (795)
+.++.+++.++|.|++.++ ++|...|...
T Consensus 96 D~~G~LYav~dG~iyr~~pP~~~~~~Wl~~ 125 (236)
T 1tl2_A 96 DPNGYLYAVSKDKLYKASPPQSDTDNWIAR 125 (236)
T ss_dssp CTTSCEEEEETTEEEEESCCCSTTCCHHHH
T ss_pred CCCCCEEEeCCCEEEEeCCCcCCCCceecc
Confidence 3456677667788888875 3566667544
No 338
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=26.01 E-value=1e+03 Score=29.42 Aligned_cols=159 Identities=9% Similarity=0.073 Sum_probs=82.2
Q ss_pred CCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEE--EeccCcccc
Q 003791 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWE--SFLRGSKHS 130 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe--~~~~~~~~s 130 (795)
++.++-.|.+++ .-++...+..+.+...+.+..|... ...+..|+++. |+.+..++..+|.+.=. ..+..+..+
T Consensus 483 ~~~ivQVt~~~I-rli~~~~~~~~~~w~~p~~~~I~~A--s~n~~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evsc 558 (1158)
T 3ei3_A 483 HQQLIQITSASV-RLVSQEPKALVSEWKEPQAKNISVA--SCNSSQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVAC 558 (1158)
T ss_dssp TTEEEEEESSCE-EEEESSSCCEEEEECCTTCCCCCEE--EECSSEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEE
T ss_pred CCeEEEEecCEE-EEEECCCCeEEEEEECCCCCEEEEE--EeCCCEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEE
Confidence 345555555554 4566666656633333333234332 34445566664 56888888877764311 122222210
Q ss_pred CCceeccccccccCCCeEEEE-e-CCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEE-EEecCCceeEEEEE
Q 003791 131 KPLLLVPTNLKVDKDSLILVS-S-KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYV-VGYAGSSQFHAYQI 207 (795)
Q Consensus 131 ~~~~~~~~~~~~~~~~~V~V~-~-~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyv-v~~~g~~~~~v~al 207 (795)
..+.+.+......+.++|. + ++.+.-++..+-++++...++.... |..+....-++..|. ++...| .+.-+.+
T Consensus 559 --l~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~-p~si~l~~~~~~~~L~igl~dG-~l~~~~~ 634 (1158)
T 3ei3_A 559 --LDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEII-PRSILMTTFESSHYLLCALGDG-ALFYFGL 634 (1158)
T ss_dssp --EECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCC-EEEEEEEEETTEEEEEEEETTS-EEEEEEE
T ss_pred --EEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCC-CcEEEEEEeCCCcEEEEEeCCC-eEEEEEE
Confidence 0111100000112455665 4 8999999999999999988865332 444432222344432 344333 2333567
Q ss_pred EcCCCceeeeee
Q 003791 208 NAMNGELLNHET 219 (795)
Q Consensus 208 d~~tG~~~w~~~ 219 (795)
|..||+.....+
T Consensus 635 d~~tg~l~d~r~ 646 (1158)
T 3ei3_A 635 NIETGLLSDRKK 646 (1158)
T ss_dssp CTTTCCEEEEEE
T ss_pred cCCCCcccccee
Confidence 888888876543
No 339
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=25.71 E-value=5.4e+02 Score=26.13 Aligned_cols=164 Identities=12% Similarity=0.167 Sum_probs=77.6
Q ss_pred ceeeccccceeEEEeccCc-eeeeeeeeeccCCCEEEEEeCCCEEEEEECcCCccceEEEcCCc---ceeeeeeeeeCCE
Q 003791 22 SLYEDQVGLMDWHQQYIGK-VKHAVFHTQKTGRKRVVVSTEENVIASLDLRHGEIFWRHVLGIN---DVVDGIDIALGKY 97 (795)
Q Consensus 22 Al~edq~G~~dW~~~~vG~-~~~~~f~~~~~~~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~---~~i~~l~~~~g~~ 97 (795)
.+|....|-.-|+...... .....+.......+.+|++.+.|.|+. ..||-.-|+...... +.+..+.....+.
T Consensus 57 ~i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~g~i~~--S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~ 134 (327)
T 2xbg_A 57 TLMETRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEPPIMLH--TTDGGQSWSQIPLDPKLPGSPRLIKALGNGS 134 (327)
T ss_dssp EEEEESSTTSSCEECCCCCSCCCCEEEEEEEETTEEEEEEETTEEEE--ESSTTSSCEECCCCTTCSSCEEEEEEEETTE
T ss_pred eEEEeCCCCCCCeECCCCCCCCCccEEEEEecCCeEEEEECCCeEEE--ECCCCCCceECccccCCCCCeEEEEEECCCC
Confidence 3566555555788754321 111112221222467888888887765 457777999865321 2232331223334
Q ss_pred EEEEEccCCeEEEEeCCCCcEeEEEeccCccccCCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEeccCcc
Q 003791 98 VITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDFAAES 176 (795)
Q Consensus 98 ~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~~~~~ 176 (795)
++.++..+...+ ..||-.-|+....... .....+ ....++.+++. .+|.+++-+ ..|...|+.......
T Consensus 135 ~~~~~~~g~v~~---S~DgG~tW~~~~~~~~--~~~~~~----~~~~~~~~~~~g~~G~~~~S~-d~gG~tW~~~~~~~~ 204 (327)
T 2xbg_A 135 AEMITNVGAIYR---TKDSGKNWQALVQEAI--GVMRNL----NRSPSGEYVAVSSRGSFYSTW-EPGQTAWEPHNRTTS 204 (327)
T ss_dssp EEEEETTCCEEE---ESSTTSSEEEEECSCC--CCEEEE----EECTTSCEEEEETTSSEEEEE-CTTCSSCEEEECCSS
T ss_pred EEEEeCCccEEE---EcCCCCCCEEeecCCC--cceEEE----EEcCCCcEEEEECCCcEEEEe-CCCCCceeECCCCCC
Confidence 444344443333 3456667987643221 111111 11223444444 466666654 333456765322111
Q ss_pred eeeeeEEEEecCCEEEEEEecC
Q 003791 177 VEVQQVIQLDESDQIYVVGYAG 198 (795)
Q Consensus 177 ~~~~~vv~s~~~~~Vyvv~~~g 198 (795)
.....+. ...++.+|+++..|
T Consensus 205 ~~~~~~~-~~~~g~~~~~~~~G 225 (327)
T 2xbg_A 205 RRLHNMG-FTPDGRLWMIVNGG 225 (327)
T ss_dssp SCEEEEE-ECTTSCEEEEETTT
T ss_pred CccceeE-ECCCCCEEEEeCCc
Confidence 1122332 23466777766554
No 340
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=23.75 E-value=8.4e+02 Score=27.68 Aligned_cols=185 Identities=11% Similarity=0.040 Sum_probs=91.8
Q ss_pred CCCEEEEEeC-CCEEEEEECcCCccceEEEcCCc-ceeeeeeeeeCCEEEEEEc-cCCeEEEEeCCCCcEeEEEeccCcc
Q 003791 52 GRKRVVVSTE-ENVIASLDLRHGEIFWRHVLGIN-DVVDGIDIALGKYVITLSS-DGSTLRAWNLPDGQMVWESFLRGSK 128 (795)
Q Consensus 52 ~~~~v~vat~-~g~l~ALn~~tG~ivWR~~l~~~-~~i~~l~~~~g~~~V~Vs~-~g~~v~A~d~~tG~llWe~~~~~~~ 128 (795)
.+++||+++- .+.|..+++..+.+ +..+..+ ....++.+--.++.+|++. ..++|...++. |... ..+....
T Consensus 47 ~~~~lywtD~~~~~I~r~~~~g~~~--~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~d-G~~~--~~l~~~~ 121 (628)
T 4a0p_A 47 TDNRIYWTDISLKTISRAFMNGSAL--EHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLD-GQHR--QVLVWKD 121 (628)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSC--EEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT-STTC--EEEECSS
T ss_pred CCCEEEEEECCCCeEEEEECCCCCc--EEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecC-CCcE--EEEEeCC
Confidence 3678888875 57888888754432 3333322 1233452221234455443 35678888874 4321 1111111
Q ss_pred ccCCceecccccccc-CCCeEEEEe---CCEEEEEECCCCcEEEEEeccCcceeeeeEEEEecCCEEEEEEecCCceeEE
Q 003791 129 HSKPLLLVPTNLKVD-KDSLILVSS---KGCLHAVSSIDGEILWTRDFAAESVEVQQVIQLDESDQIYVVGYAGSSQFHA 204 (795)
Q Consensus 129 ~s~~~~~~~~~~~~~-~~~~V~V~~---~g~l~ald~~tG~~~W~~~~~~~~~~~~~vv~s~~~~~Vyvv~~~g~~~~~v 204 (795)
+ ..+.- .+++ ..+.+|+.. .+++.+.+.......=-.. . -..|..+.....++.+|+.....+ .+
T Consensus 122 l-~~P~~----iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~--~-~~~P~GlalD~~~~~LY~aD~~~~---~I 190 (628)
T 4a0p_A 122 L-DSPRA----LALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVP--N-VGRANGLTIDYAKRRLYWTDLDTN---LI 190 (628)
T ss_dssp C-CCEEE----EEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC--S-CSSEEEEEEETTTTEEEEEETTTT---EE
T ss_pred C-CCccc----EEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEEC--C-CCCcceEEEccccCEEEEEECCCC---EE
Confidence 1 01111 1223 145666653 4577777654322111111 1 111334432234688998654433 67
Q ss_pred EEEEcCCCceeeeeeeeccCCcccce-EEecCcEEEEEECCCCeEEEEEeecCe
Q 003791 205 YQINAMNGELLNHETAAFSGGFVGDV-ALVSSDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 205 ~ald~~tG~~~w~~~v~~~~~~~~~~-~~vg~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
..+|...+.. +. +. ..+..+. +-+.++.++|+|..++.+...+..+|+
T Consensus 191 ~~~d~dG~~~--~v-~~--~~l~~P~glav~~~~ly~tD~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 191 ESSNMLGLNR--EV-IA--DDLPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQ 239 (628)
T ss_dssp EEEETTSCSC--EE-EE--ECCSCEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred EEEcCCCCce--EE-ee--ccCCCceEEEEECCEEEEecCCCCEEEEEECCCCC
Confidence 8888754433 11 11 1222211 112456788999888999999877776
No 341
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=22.22 E-value=1.7e+02 Score=31.64 Aligned_cols=55 Identities=7% Similarity=-0.155 Sum_probs=39.6
Q ss_pred EEEEEEcCCC--ceeeeeeeeccCCccc---ceEEec---------CcEEEEEECCCCeEEEEEeecCe
Q 003791 203 HAYQINAMNG--ELLNHETAAFSGGFVG---DVALVS---------SDTLVTLDTTRSILVTVSFKNRK 257 (795)
Q Consensus 203 ~v~ald~~tG--~~~w~~~v~~~~~~~~---~~~~vg---------~~~lv~~d~~~~~L~v~~l~sg~ 257 (795)
++.++|++|+ +++..+.+....-..+ .-+.|. +.+++.+|.....|.+.|+.+++
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~ 192 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQD 192 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTE
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCc
Confidence 7999999999 9998887643211111 112223 46788899888899999999988
No 342
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A
Probab=22.17 E-value=2.1e+02 Score=24.54 Aligned_cols=57 Identities=23% Similarity=0.449 Sum_probs=34.4
Q ss_pred eCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccCCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEe
Q 003791 94 LGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRD 171 (795)
Q Consensus 94 ~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~ 171 (795)
.+...+.+..+| .+..++. |..+|........ ....+.+ .+|.|..+| +|+++|+..
T Consensus 18 ~~~~~L~~~~dg-nlvl~~~--~~~vW~sn~~~~~----------------~~~~l~l~~~GNLvl~d--~~~~~W~S~ 75 (112)
T 1xd5_A 18 EGGYLFIIQNDC-NLVLYDN--NRAVWASGTNGKA----------------SGCVLKMQNDGNLVIYS--GSRAIWASN 75 (112)
T ss_dssp ETTEEEEECTTS-CEEEEET--TEEEEECCCTTSC----------------SSEEEEECTTSCEEEEE--TTEEEEECC
T ss_pred CCCEEEEEcCCC-cEEEEEC--CEEEEeCCCcCCC----------------CCEEEEEeCCCCEEEEc--CCEEEEECC
Confidence 344555555554 4555665 7899987643210 1122333 578888888 788999954
No 343
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=21.25 E-value=7.6e+02 Score=26.27 Aligned_cols=98 Identities=20% Similarity=0.198 Sum_probs=60.0
Q ss_pred CCEEEEEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccCC
Q 003791 53 RKRVVVSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKP 132 (795)
Q Consensus 53 ~~~v~vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~~ 132 (795)
++.++++ .++.|..+|.++-...+++..-.. .+..+. .....++++++ +|.|+.||..+|... .+.... ..
T Consensus 97 ~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~-~v~~i~-~~~p~~av~~~-dG~L~v~dl~~~~~~---~~~~~V--s~ 167 (388)
T 1xip_A 97 GDQVLVS-TRNALYSLDLEELSEFRTVTSFEK-PVFQLK-NVNNTLVILNS-VNDLSALDLRTKSTK---QLAQNV--TS 167 (388)
T ss_dssp TTEEEEE-ESSEEEEEESSSTTCEEEEEECSS-CEEEEE-ECSSEEEEEET-TSEEEEEETTTCCEE---EEEESE--EE
T ss_pred CCEEEEE-cCCcEEEEEchhhhccCccceeec-ceeeEE-ecCCCEEEEEC-CCCEEEEEccCCccc---cccCCc--eE
Confidence 6778888 778999999888776666533222 133332 22334444455 569999999999874 222221 11
Q ss_pred ceeccccccccCCCeEEEEeCCEEEEEECCCCcE
Q 003791 133 LLLVPTNLKVDKDSLILVSSKGCLHAVSSIDGEI 166 (795)
Q Consensus 133 ~~~~~~~~~~~~~~~V~V~~~g~l~ald~~tG~~ 166 (795)
.. +...+.++...+|.+..++..+++.
T Consensus 168 v~-------WSpkG~~vg~~dg~i~~~~~~~~~~ 194 (388)
T 1xip_A 168 FD-------VTNSQLAVLLKDRSFQSFAWRNGEM 194 (388)
T ss_dssp EE-------ECSSEEEEEETTSCEEEEEEETTEE
T ss_pred EE-------EcCCceEEEEcCCcEEEEcCCCccc
Confidence 12 2224444444689899998887775
No 344
>2jxw_A WW domain-binding protein 4; WW domain containing protein, FBP21, WBP4, metal- binding, mRNA processing, mRNA splicing, nucleus, polymorphism; NMR {Homo sapiens}
Probab=20.71 E-value=90 Score=25.27 Aligned_cols=64 Identities=20% Similarity=0.201 Sum_probs=41.3
Q ss_pred EEeCCCEEEEEECcCCccceEEEcCCcceeeeeeeeeCCEEEEEEccCCeEEEEeCCCCcEeEEEe
Q 003791 58 VSTEENVIASLDLRHGEIFWRHVLGINDVVDGIDIALGKYVITLSSDGSTLRAWNLPDGQMVWESF 123 (795)
Q Consensus 58 vat~~g~l~ALn~~tG~ivWR~~l~~~~~i~~l~~~~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~ 123 (795)
..+.+|.++=+|..||+-.|............ .....+..-.....|+.+-+|..||.-.|+.+
T Consensus 10 ~~~~~G~~YYyN~~T~~s~We~P~~~~~~~e~--~~~~~~W~~~~~~~Gr~YyyN~~T~~s~We~P 73 (75)
T 2jxw_A 10 GITSEGYHYYYDLISGASQWEKPEGFQGDLKK--TAVKTVWVEGLSEDGFTYYYNTETGESRWEKP 73 (75)
T ss_dssp EEETTTEEEEEETTTTEEECSCCSSCSSCCSS--SSCCCSEEEEEETTTEEEEEETTTTEEESSCC
T ss_pred EECCCCCEEEEECCCCCEeecCCCcccccccc--cCCCccEEEEECCCCCEEEEECcCCCEeccCc
Confidence 34557999999999999999765432211000 01223344333335689999999999999754
No 345
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*
Probab=20.12 E-value=3.9e+02 Score=22.71 Aligned_cols=59 Identities=22% Similarity=0.425 Sum_probs=34.6
Q ss_pred eCCEEEEEEccCCeEEEEeCCCCcEeEEEeccCccccCCceeccccccccCCCeEEEE-eCCEEEEEECCCCcEEEEEec
Q 003791 94 LGKYVITLSSDGSTLRAWNLPDGQMVWESFLRGSKHSKPLLLVPTNLKVDKDSLILVS-SKGCLHAVSSIDGEILWTRDF 172 (795)
Q Consensus 94 ~g~~~V~Vs~~g~~v~A~d~~tG~llWe~~~~~~~~s~~~~~~~~~~~~~~~~~V~V~-~~g~l~ald~~tG~~~W~~~~ 172 (795)
.+...+.+..+| .+..++. |..+|........ ....+.+ .+|.|..+|. +|.++|+...
T Consensus 18 ~g~~~L~~q~dG-nLvly~~--~~~vW~snt~~~~----------------~~~~l~l~~dGNLvl~~~-~~~~~W~S~t 77 (109)
T 3dzw_A 18 NGRYVFIMQEDC-NLVLYDV--DKPIWATNTGGLD----------------RRCHLSMQSDGNLVVYSP-RNNPIWASNT 77 (109)
T ss_dssp ETTEEEEECTTS-CEEEEET--TEEEEECCCTTSS----------------SSCEEEECTTSCEEEECT-TSCEEEECCC
T ss_pred CCCEEEEEcCCC-cEEEEeC--CEEEEECCcccCC----------------CCEEEEEeCCCCEEEECC-CCCEEEECCC
Confidence 455555555554 5666776 7899986543211 1112233 4677777764 6789997543
Done!