BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003794
(795 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359487958|ref|XP_002264143.2| PREDICTED: uncharacterized protein LOC100245166 [Vitis vinifera]
Length = 909
Score = 1082 bits (2799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/789 (67%), Positives = 637/789 (80%), Gaps = 11/789 (1%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQR--LYV 58
MM RDDIPVGVGGEGGILPNGTILPDVGGY PIIDQG STAG CRYRQAIP+G + L +
Sbjct: 94 MMGRDDIPVGVGGEGGILPNGTILPDVGGYLPIIDQGTSTAGGCRYRQAIPMGAKGLLDI 153
Query: 59 NTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHL 118
+T YGLRK FLPQG R Y+PL QPTAQQV+INA+SAGPITVF++G+HTNFAIFLM NP L
Sbjct: 154 DTMYGLRKGFLPQGSRGYSPLEQPTAQQVMINAVSAGPITVFLLGTHTNFAIFLMTNPQL 213
Query: 119 KKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVL 178
KKNIEHIYVMGG+I C N+S+ E+C +IGNL+P D NPYAEFN F DPFAAY VL
Sbjct: 214 KKNIEHIYVMGGSIWPHC-PKKNNSRPEECGNIGNLFPGDDNPYAEFNFFEDPFAAYEVL 272
Query: 179 HSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPFHEAY 238
HSGIPVT+IPLDAT TIP++ENFF FE++QNTYEAQY F+++KM DTW + FHE
Sbjct: 273 HSGIPVTLIPLDATNTIPITENFFKAFEQKQNTYEAQYSFKAMKMAHDTWFNNH-FHENV 331
Query: 239 CMWDSFMAGVALSIMLNSSSHNGENACSEMEYMNLTVVTSNEPYGISDGSNPLIDGLEVP 298
MWD FM GVALSIM NS++ NGEN + MEY N+TVVTSNEPYGISDGSNP DG
Sbjct: 332 FMWDYFMVGVALSIMRNSANDNGENEFAVMEYTNITVVTSNEPYGISDGSNPFNDGSTTS 391
Query: 299 KFNVQKNGVHSGHVQTGMQDPFCLESG-KAKCQDGYIKEVKGPEAVRVLVATKAKPSQDL 357
KF KNGVHSGHVQTG +DPFCLE K +C+DGY EV GP++VRVLVAT+AK +QD
Sbjct: 392 KF---KNGVHSGHVQTGNRDPFCLEKNQKGRCKDGYTMEVTGPDSVRVLVATEAKRNQDA 448
Query: 358 GSLLEKEFYLSFLNALNFPQQAGRFNISTQFPYYEEILRKPDFGKKLMGKPVVFDIDMSA 417
SLL++EFY SFL+ ++ PQQ+GRFNISTQFPYY EI+ KPDFG + GKP VFD+DMS
Sbjct: 449 NSLLDREFYKSFLDVISRPQQSGRFNISTQFPYYGEIVYKPDFGTRKKGKPFVFDMDMST 508
Query: 418 GDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIPVGLGDVFAV 477
GD +AL+YLLKLPVE I+LKGILVS GWA++AT+D+VYD+LHMMGRDDIPVGLGDVFA+
Sbjct: 509 GDLIALLYLLKLPVEQIDLKGILVSPNGWASAATIDIVYDVLHMMGRDDIPVGLGDVFAI 568
Query: 478 GEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENSVRFGASQDN 537
G+ FP G CKY KAIPLG GG LDSDTLYG ARDLPRSPRRYTAENSV+FGA +D
Sbjct: 569 GQKEQTFPLFGDCKYRKAIPLGGGGLLDSDTLYGFARDLPRSPRRYTAENSVKFGAPRDT 628
Query: 538 DDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGN 597
D PE+RQPLA++VWKSIV+S +PGSKIT LTNGPLTNLAQ+I + +SSVIQD+ IVGG+
Sbjct: 629 DHPEVRQPLALEVWKSIVDSTDPGSKITYLTNGPLTNLAQVISSERASSVIQDLCIVGGH 688
Query: 598 KGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHK 657
DN+ GN+FTVPS+++AEFNMFLDPLA K V +SKL + LIPL +QR V+SF +L +
Sbjct: 689 I--DNKTGNLFTVPSNEFAEFNMFLDPLAVKVVMDSKLNVTLIPLGVQRSVSSFNHVLQR 746
Query: 658 LRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGG-NPHLNQTYKIK 716
L + +TPE+ F+Q LL L LQQ YHH+DTFLGE+LGAV+L G +P LNQ ++
Sbjct: 747 LEHKNQTPEAAFTQNLLSRLSQLQQKSDRYHHMDTFLGEILGAVVLAGDDPLLNQAFQHM 806
Query: 717 SLEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEVLGDHKQSAVIGSFYDQ 776
L+I+++GD+ GQI+++++QG+LVKVL S+N YYDHFA+VL + QSA IG+F +Q
Sbjct: 807 PLKILANGDVKNDGQIVIDEKQGRLVKVLRSVNTTEYYDHFADVLNNQSQSARIGNFAEQ 866
Query: 777 EKTWNTPPN 785
++ W TPPN
Sbjct: 867 KRIWTTPPN 875
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 156/321 (48%), Gaps = 59/321 (18%)
Query: 407 KPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSAT-VDVVYDLLHMMGRD 465
+ ++ D D+ DF +L YLLK NL+ I +S+ GW S ++ +YDLL MMGRD
Sbjct: 39 RRILMDTDVDMDDFFSLFYLLKENTSEFNLEAITLSANGWCDSGHGINHIYDLLFMMGRD 98
Query: 466 DIPVGL---GDVFAVGEVNPK---FPPI--------GGCKYAKAIPLGSGGFLDSDTLYG 511
DIPVG+ G + G + P + PI GGC+Y +AIP+G+ G LD DT+YG
Sbjct: 99 DIPVGVGGEGGILPNGTILPDVGGYLPIIDQGTSTAGGCRYRQAIPMGAKGLLDIDTMYG 158
Query: 512 LARD-LPRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNG 570
L + LP+ R Y+ L QP A V ++ ++ G IT+ G
Sbjct: 159 LRKGFLPQGSRGYSP----------------LEQPTAQQV---MINAVSAGP-ITVFLLG 198
Query: 571 PLTNLAQIIGLQNS--SSVIQDVYIVGG---------NKGQDNEKGNV---FTVPSSKYA 616
TN A I + N I+ +Y++GG N + E GN+ F + YA
Sbjct: 199 THTNFA-IFLMTNPQLKKNIEHIYVMGGSIWPHCPKKNNSRPEECGNIGNLFPGDDNPYA 257
Query: 617 EFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV---ASFFKILHKLRDRKKTPESVFSQRL 673
EFN F DP AA V S + + LIPL + +FFK + ++ T E+ +S +
Sbjct: 258 EFNFFEDPFAAYEVLHSGIPVTLIPLDATNTIPITENFFKAFEQ---KQNTYEAQYSFKA 314
Query: 674 LQGLMTLQQSHHSYHHVDTFL 694
++ M +++ H + F+
Sbjct: 315 MK--MAHDTWFNNHFHENVFM 333
>gi|255551579|ref|XP_002516835.1| inosine-uridine preferring nucleoside hydrolase, putative [Ricinus
communis]
gi|223543923|gb|EEF45449.1| inosine-uridine preferring nucleoside hydrolase, putative [Ricinus
communis]
Length = 885
Score = 1076 bits (2782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 532/800 (66%), Positives = 640/800 (80%), Gaps = 16/800 (2%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQ---RLY 57
MM RDDI VGVGGEGGIL +GTIL +VGGY PII+Q MST G CRYRQAIPVG RL
Sbjct: 85 MMGRDDISVGVGGEGGILDDGTILSNVGGYLPIIEQEMSTTGGCRYRQAIPVGHFGGRLD 144
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPH 117
+N+NYGLRKAFLPQG RKY+PLRQPTAQQVLI+ ISAGPI VF++G+HTNFAIFLM NPH
Sbjct: 145 INSNYGLRKAFLPQGSRKYSPLRQPTAQQVLIDKISAGPINVFIIGAHTNFAIFLMKNPH 204
Query: 118 LKKNIEHIYVMGGAIRSD----CF--NSTNSSQSEQCDSIGNLYPD-DSNPYAEFNIFSD 170
LKKN++HIYVMGG +RS C N+ S QC GNL+ D SNPYAEFNIF D
Sbjct: 205 LKKNVKHIYVMGGGVRSQNPTGCCPRNTRLSCHPRQCGDNGNLFSDYTSNPYAEFNIFGD 264
Query: 171 PFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSG 230
PFAAY V+HSGIPVT++PLDAT TIP+SENFF FE Q+TYEAQYCFQSLKM RDTW G
Sbjct: 265 PFAAYQVIHSGIPVTLVPLDATNTIPISENFFNTFELNQHTYEAQYCFQSLKMARDTWFG 324
Query: 231 SPPFHEAYCMWDSFMAGVALSIMLNSSSHNGENACSEMEYMNLTVVTSNEPYGISDGSNP 290
F+ +Y MWDSF +GVA+SIM NS NGEN +EMEY+N+TVVTSNEPYG DGSNP
Sbjct: 325 DQ-FYTSYFMWDSFTSGVAVSIMRNSHKQNGENEFAEMEYINITVVTSNEPYGAYDGSNP 383
Query: 291 LIDGLEVPKFNVQKNGVHSGHVQTGMQDPFC-LESGKAKCQDGYIKEVKGPEAVRVLVAT 349
DG +VPKFN++K G HSGHVQTG++DPFC +++ + +CQDGY KEV G E VRVLVAT
Sbjct: 384 FFDGRKVPKFNLKKGGAHSGHVQTGLRDPFCTVQNEQGRCQDGYTKEVTGSEGVRVLVAT 443
Query: 350 KAKPSQDLGSLLEKEFYLSFLNALNFPQQAGRFNISTQFPYYEEILRKPDFGKKLMGKPV 409
+AKP+ D S L++ ++ SFL+ LN PQQ GRFN +TQFPYY+E+L KPDFG K +GKPV
Sbjct: 444 RAKPNPDTSSELDRAYFKSFLDVLNHPQQTGRFNFTTQFPYYKEVLYKPDFGTKRLGKPV 503
Query: 410 VFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIPV 469
VFD+DMSAGDFLALIYLLKLPVELINLKGI+VS TGWA +AT+DVVYDLLHMMGRDDIPV
Sbjct: 504 VFDMDMSAGDFLALIYLLKLPVELINLKGIIVSPTGWANAATIDVVYDLLHMMGRDDIPV 563
Query: 470 GLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENSV 529
GLG+VFA + + F +G CKY K IP GSGGFLDSDTLYGLARDLPRSPRRYTA NSV
Sbjct: 564 GLGNVFARNQSDRIFSAVGDCKYVKVIPHGSGGFLDSDTLYGLARDLPRSPRRYTAHNSV 623
Query: 530 RFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQII-GLQNSSSVI 588
+FGA +D D PELRQPLA++VW ++V +EPGSKI+ILTNGPLT+LA+II N+SSVI
Sbjct: 624 KFGAPRDTDHPELRQPLALEVWDTVVRKLEPGSKISILTNGPLTSLAEIILSDNNASSVI 683
Query: 589 QDVYIVGGNKGQDN-EKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
+DVY+VGG+ +N +KGNV T S++Y E N++LDPLAAK VFES L+I LIPL QR+
Sbjct: 684 KDVYVVGGHISHNNLDKGNVLTSHSNEYTEMNIYLDPLAAKTVFESSLDITLIPLEAQRK 743
Query: 648 VASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGG-- 705
V+SF KIL L KTPE++F++RLL L L Q+HH YHH+DTFLGE+LGAV LGG
Sbjct: 744 VSSFSKILQSLSKTNKTPEALFARRLLSRLYRLHQAHHRYHHMDTFLGEILGAVSLGGGH 803
Query: 706 NPHLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEVLGDHK 765
+ LN KIK ++++++G S+ G+I+V+++QGKLV++L+S++ VYY+HFA LG
Sbjct: 804 DSLLNSILKIKRIKVLAEGVESREGEIVVDEKQGKLVRLLDSVDPTVYYNHFAWQLGVKM 863
Query: 766 QSAVIGSFYDQEKTWNTPPN 785
QSAVIGSF +Q + W+T PN
Sbjct: 864 QSAVIGSFDEQRRIWSTKPN 883
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 156/342 (45%), Gaps = 65/342 (19%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSA-TVDVVYDLLHMMGRDDI 467
++ D D+ DF AL+YLLKL L+ + +++ W + V+ +YD+L+MMGRDDI
Sbjct: 32 ILLDSDVDTDDFFALLYLLKLNRSEFELEAVTINANAWTDAGHAVNQIYDILYMMGRDDI 91
Query: 468 PVGLG-------DVFAVGEVNPKFPPI-------GGCKYAKAIPLGS-GGFLDSDTLYGL 512
VG+G D + V P I GGC+Y +AIP+G GG LD ++ YGL
Sbjct: 92 SVGVGGEGGILDDGTILSNVGGYLPIIEQEMSTTGGCRYRQAIPVGHFGGRLDINSNYGL 151
Query: 513 ARD-LPRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGP 571
+ LP+ R+Y+ LRQP A V +++ I G I + G
Sbjct: 152 RKAFLPQGSRKYSP----------------LRQPTAQQV---LIDKISAGP-INVFIIGA 191
Query: 572 LTNLAQIIGLQNS--SSVIQDVYIVGGNKGQDN-------------------EKGNVFT- 609
TN A I ++N ++ +Y++GG N + GN+F+
Sbjct: 192 HTNFA-IFLMKNPHLKKNVKHIYVMGGGVRSQNPTGCCPRNTRLSCHPRQCGDNGNLFSD 250
Query: 610 VPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVF 669
S+ YAEFN+F DP AA V S + + L+PL + + + T E+ +
Sbjct: 251 YTSNPYAEFNIFGDPFAAYQVIHSGIPVTLVPLDATNTIPISENFFNTFELNQHTYEAQY 310
Query: 670 ---SQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGGNPH 708
S ++ + Q + SY D+F V AV + N H
Sbjct: 311 CFQSLKMARDTWFGDQFYTSYFMWDSFTSGV--AVSIMRNSH 350
>gi|297736939|emb|CBI26140.3| unnamed protein product [Vitis vinifera]
Length = 893
Score = 1066 bits (2758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/800 (64%), Positives = 638/800 (79%), Gaps = 16/800 (2%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQR---LY 57
MM RDDIPVGVGGEGGI +GTILP+VGGY PII+QG++T G CRYRQAIP G+ L
Sbjct: 89 MMGRDDIPVGVGGEGGIREDGTILPNVGGYLPIIEQGLTTTGGCRYRQAIPKGRYGGILD 148
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPH 117
+++NYG+RKAFLPQG RKY PL+QPTAQQV+I+ IS+GPI VFV+G HTNFAIFLMNNPH
Sbjct: 149 IDSNYGIRKAFLPQGSRKYHPLQQPTAQQVMIDTISSGPINVFVIGGHTNFAIFLMNNPH 208
Query: 118 LKKNIEHIYVMGGAIRSD----CF--NSTNSSQSEQCDSIGNLYPD-DSNPYAEFNIFSD 170
LKKNI+HIYVMGG +RS C N++++ + QC GNL+ SNPYAEFNIF D
Sbjct: 209 LKKNIKHIYVMGGGVRSKNPTGCCPKNASSTCKPRQCGDPGNLFTGYTSNPYAEFNIFGD 268
Query: 171 PFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSG 230
PFAAY VLHSGIP+T++PLDAT TIP+ E FF F++ Q TYEAQYCF+SLKM RDTW
Sbjct: 269 PFAAYLVLHSGIPLTLVPLDATNTIPIDEEFFDAFDQNQKTYEAQYCFKSLKMTRDTWFD 328
Query: 231 SPPFHEAYCMWDSFMAGVALSIMLNS-SSHNGENACSEMEYMNLTVVTSNEPYGISDGSN 289
++ +Y MWDSF +G+A SIM +S +H+GEN +EMEYMN+TVVTSN+PYGISDGSN
Sbjct: 329 DQ-YYTSYFMWDSFTSGIATSIMRHSQKNHHGENEFAEMEYMNITVVTSNKPYGISDGSN 387
Query: 290 PLIDGLEVPKFNVQKNGVHSGHVQTGMQDPFCL-ESGKAKCQDGYIKEVKGPEAVRVLVA 348
P DGL++PKFN++K GVHSGHVQ +QDPFCL E+GK +C+DGY EV GPE VRVLVA
Sbjct: 388 PFFDGLKIPKFNLKKGGVHSGHVQKSLQDPFCLTENGKGRCKDGYTMEVTGPEGVRVLVA 447
Query: 349 TKAKPSQDLGSLLEKEFYLSFLNALNFPQQAGRFNISTQFPYYEEILRKPDFGKKLMGKP 408
TKAKP+QD S LE+EFY SFL+ LN P+Q+GRFN + QFPY++E+ KPDFGKK +GK
Sbjct: 448 TKAKPNQDAKSPLEREFYKSFLDVLNSPEQSGRFNFTNQFPYFKEVFYKPDFGKKKLGKN 507
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
V+FD+DMSAGDFLAL +LLK+PVE+INLK ILVS TGWA +AT+D++YDLLHMMGRDDIP
Sbjct: 508 VIFDMDMSAGDFLALFFLLKVPVEVINLKAILVSPTGWANAATIDIIYDLLHMMGRDDIP 567
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
VGLGDV+A+ + +P F +G CKY KAIP GSGGFLDSDTLYG AR LPRSPRRYTAENS
Sbjct: 568 VGLGDVYAMNQSDPIFSSVGDCKYVKAIPHGSGGFLDSDTLYGFARHLPRSPRRYTAENS 627
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQII-GLQNSSSV 587
V+FGA +D D PELRQPLA+DVW S++++++ GSKITILTNGPLT LA II +N++S+
Sbjct: 628 VKFGAPRDTDHPELRQPLALDVWDSVLKTLDSGSKITILTNGPLTTLANIILSRKNTTSL 687
Query: 588 IQDVYIVGGNKGQDNE-KGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQR 646
IQDVY+VGG+ KGNVF+VP +++AE N++LDP AAK VFES L+IKLIPL QR
Sbjct: 688 IQDVYVVGGHISHGGTMKGNVFSVPLNEHAELNLYLDPFAAKTVFESDLDIKLIPLRAQR 747
Query: 647 RVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGGN 706
RV+SF KI+ +L KKTPE++F++RLL L LQ+ HH Y H+ TFLGE+LGAV+L +
Sbjct: 748 RVSSFPKIIERLCQTKKTPEALFARRLLSTLHHLQEKHHRYRHMHTFLGEILGAVVLADD 807
Query: 707 -PHLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEVLGDHK 765
LN T+K K +++ + GD S GQ+ ++++QGKLVK+L +N YYD A LGD K
Sbjct: 808 HSFLNATFKSKPIKLYATGDESMDGQLAIDEKQGKLVKLLRRVNPKAYYDLLANRLGDKK 867
Query: 766 QSAVIGSFYDQEKTWNTPPN 785
QSAVI SF +Q++ W TPPN
Sbjct: 868 QSAVIASFEEQKRIWTTPPN 887
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 150/324 (46%), Gaps = 65/324 (20%)
Query: 422 ALIYLLKLPVELINLKGILVSSTGWATSA-TVDVVYDLLHMMGRDDIPVGLGDVFAVGEV 480
A++YLLKL +L+ I +++ W + V+ VYDLL+MMGRDDIPVG+G + E
Sbjct: 49 AILYLLKLNRSEFDLQAITINTNAWTNAGHAVNQVYDLLYMMGRDDIPVGVGGEGGIRED 108
Query: 481 NPKFP------PI--------GGCKYAKAIPLGS-GGFLDSDTLYGLARD-LPRSPRRYT 524
P PI GGC+Y +AIP G GG LD D+ YG+ + LP+ R+Y
Sbjct: 109 GTILPNVGGYLPIIEQGLTTTGGCRYRQAIPKGRYGGILDIDSNYGIRKAFLPQGSRKYH 168
Query: 525 AENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS 584
L+QP A V ++++I G I + G TN A I L N+
Sbjct: 169 P----------------LQQPTAQQV---MIDTISSGP-INVFVIGGHTNFA--IFLMNN 206
Query: 585 SSV---IQDVYIVGGNKGQDN-------------------EKGNVFT-VPSSKYAEFNMF 621
+ I+ +Y++GG N + GN+FT S+ YAEFN+F
Sbjct: 207 PHLKKNIKHIYVMGGGVRSKNPTGCCPKNASSTCKPRQCGDPGNLFTGYTSNPYAEFNIF 266
Query: 622 LDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVF---SQRLLQGLM 678
DP AA V S + + L+PL + + +KT E+ + S ++ +
Sbjct: 267 GDPFAAYLVLHSGIPLTLVPLDATNTIPIDEEFFDAFDQNQKTYEAQYCFKSLKMTRDTW 326
Query: 679 TLQQSHHSYHHVDTFLGEVLGAVI 702
Q + SY D+F + +++
Sbjct: 327 FDDQYYTSYFMWDSFTSGIATSIM 350
>gi|225432438|ref|XP_002277102.1| PREDICTED: uncharacterized protein LOC100263026 [Vitis vinifera]
Length = 1054
Score = 1066 bits (2757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/800 (64%), Positives = 638/800 (79%), Gaps = 16/800 (2%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQR---LY 57
MM RDDIPVGVGGEGGI +GTILP+VGGY PII+QG++T G CRYRQAIP G+ L
Sbjct: 250 MMGRDDIPVGVGGEGGIREDGTILPNVGGYLPIIEQGLTTTGGCRYRQAIPKGRYGGILD 309
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPH 117
+++NYG+RKAFLPQG RKY PL+QPTAQQV+I+ IS+GPI VFV+G HTNFAIFLMNNPH
Sbjct: 310 IDSNYGIRKAFLPQGSRKYHPLQQPTAQQVMIDTISSGPINVFVIGGHTNFAIFLMNNPH 369
Query: 118 LKKNIEHIYVMGGAIRSD----CF--NSTNSSQSEQCDSIGNLYPD-DSNPYAEFNIFSD 170
LKKNI+HIYVMGG +RS C N++++ + QC GNL+ SNPYAEFNIF D
Sbjct: 370 LKKNIKHIYVMGGGVRSKNPTGCCPKNASSTCKPRQCGDPGNLFTGYTSNPYAEFNIFGD 429
Query: 171 PFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSG 230
PFAAY VLHSGIP+T++PLDAT TIP+ E FF F++ Q TYEAQYCF+SLKM RDTW
Sbjct: 430 PFAAYLVLHSGIPLTLVPLDATNTIPIDEEFFDAFDQNQKTYEAQYCFKSLKMTRDTWFD 489
Query: 231 SPPFHEAYCMWDSFMAGVALSIMLNS-SSHNGENACSEMEYMNLTVVTSNEPYGISDGSN 289
++ +Y MWDSF +G+A SIM +S +H+GEN +EMEYMN+TVVTSN+PYGISDGSN
Sbjct: 490 DQ-YYTSYFMWDSFTSGIATSIMRHSQKNHHGENEFAEMEYMNITVVTSNKPYGISDGSN 548
Query: 290 PLIDGLEVPKFNVQKNGVHSGHVQTGMQDPFCL-ESGKAKCQDGYIKEVKGPEAVRVLVA 348
P DGL++PKFN++K GVHSGHVQ +QDPFCL E+GK +C+DGY EV GPE VRVLVA
Sbjct: 549 PFFDGLKIPKFNLKKGGVHSGHVQKSLQDPFCLTENGKGRCKDGYTMEVTGPEGVRVLVA 608
Query: 349 TKAKPSQDLGSLLEKEFYLSFLNALNFPQQAGRFNISTQFPYYEEILRKPDFGKKLMGKP 408
TKAKP+QD S LE+EFY SFL+ LN P+Q+GRFN + QFPY++E+ KPDFGKK +GK
Sbjct: 609 TKAKPNQDAKSPLEREFYKSFLDVLNSPEQSGRFNFTNQFPYFKEVFYKPDFGKKKLGKN 668
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
V+FD+DMSAGDFLAL +LLK+PVE+INLK ILVS TGWA +AT+D++YDLLHMMGRDDIP
Sbjct: 669 VIFDMDMSAGDFLALFFLLKVPVEVINLKAILVSPTGWANAATIDIIYDLLHMMGRDDIP 728
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
VGLGDV+A+ + +P F +G CKY KAIP GSGGFLDSDTLYG AR LPRSPRRYTAENS
Sbjct: 729 VGLGDVYAMNQSDPIFSSVGDCKYVKAIPHGSGGFLDSDTLYGFARHLPRSPRRYTAENS 788
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQII-GLQNSSSV 587
V+FGA +D D PELRQPLA+DVW S++++++ GSKITILTNGPLT LA II +N++S+
Sbjct: 789 VKFGAPRDTDHPELRQPLALDVWDSVLKTLDSGSKITILTNGPLTTLANIILSRKNTTSL 848
Query: 588 IQDVYIVGGNKGQDNE-KGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQR 646
IQDVY+VGG+ KGNVF+VP +++AE N++LDP AAK VFES L+IKLIPL QR
Sbjct: 849 IQDVYVVGGHISHGGTMKGNVFSVPLNEHAELNLYLDPFAAKTVFESDLDIKLIPLRAQR 908
Query: 647 RVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGGN 706
RV+SF KI+ +L KKTPE++F++RLL L LQ+ HH Y H+ TFLGE+LGAV+L +
Sbjct: 909 RVSSFPKIIERLCQTKKTPEALFARRLLSTLHHLQEKHHRYRHMHTFLGEILGAVVLADD 968
Query: 707 -PHLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEVLGDHK 765
LN T+K K +++ + GD S GQ+ ++++QGKLVK+L +N YYD A LGD K
Sbjct: 969 HSFLNATFKSKPIKLYATGDESMDGQLAIDEKQGKLVKLLRRVNPKAYYDLLANRLGDKK 1028
Query: 766 QSAVIGSFYDQEKTWNTPPN 785
QSAVI SF +Q++ W TPPN
Sbjct: 1029 QSAVIASFEEQKRIWTTPPN 1048
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 150/324 (46%), Gaps = 65/324 (20%)
Query: 422 ALIYLLKLPVELINLKGILVSSTGWATSA-TVDVVYDLLHMMGRDDIPVGLGDVFAVGEV 480
A++YLLKL +L+ I +++ W + V+ VYDLL+MMGRDDIPVG+G + E
Sbjct: 210 AILYLLKLNRSEFDLQAITINTNAWTNAGHAVNQVYDLLYMMGRDDIPVGVGGEGGIRED 269
Query: 481 NPKFP------PI--------GGCKYAKAIPLGS-GGFLDSDTLYGLARD-LPRSPRRYT 524
P PI GGC+Y +AIP G GG LD D+ YG+ + LP+ R+Y
Sbjct: 270 GTILPNVGGYLPIIEQGLTTTGGCRYRQAIPKGRYGGILDIDSNYGIRKAFLPQGSRKYH 329
Query: 525 AENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS 584
L+QP A V ++++I G I + G TN A I L N+
Sbjct: 330 P----------------LQQPTAQQV---MIDTISSGP-INVFVIGGHTNFA--IFLMNN 367
Query: 585 SSV---IQDVYIVGGNKGQDN-------------------EKGNVFT-VPSSKYAEFNMF 621
+ I+ +Y++GG N + GN+FT S+ YAEFN+F
Sbjct: 368 PHLKKNIKHIYVMGGGVRSKNPTGCCPKNASSTCKPRQCGDPGNLFTGYTSNPYAEFNIF 427
Query: 622 LDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVF---SQRLLQGLM 678
DP AA V S + + L+PL + + +KT E+ + S ++ +
Sbjct: 428 GDPFAAYLVLHSGIPLTLVPLDATNTIPIDEEFFDAFDQNQKTYEAQYCFKSLKMTRDTW 487
Query: 679 TLQQSHHSYHHVDTFLGEVLGAVI 702
Q + SY D+F + +++
Sbjct: 488 FDDQYYTSYFMWDSFTSGIATSIM 511
>gi|357447543|ref|XP_003594047.1| Pyrimidine-specific ribonucleoside hydrolase rihA [Medicago
truncatula]
gi|355483095|gb|AES64298.1| Pyrimidine-specific ribonucleoside hydrolase rihA [Medicago
truncatula]
Length = 882
Score = 1056 bits (2730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/793 (63%), Positives = 651/793 (82%), Gaps = 13/793 (1%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVG--QRLYV 58
MM RDDI VGVGGEGGILPNGTILP+VGGY PII+QGM+TAG CRYRQAIPVG RL +
Sbjct: 83 MMGRDDIAVGVGGEGGILPNGTILPNVGGYLPIIEQGMTTAGYCRYRQAIPVGFGGRLDI 142
Query: 59 NTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHL 118
+TN G+RKAFLPQG RKY PLRQPT QQVLI+ ISAGPIT+ V G+HTN AIFLMNNPHL
Sbjct: 143 DTNLGIRKAFLPQGKRKYTPLRQPTTQQVLIDKISAGPITLIVTGAHTNLAIFLMNNPHL 202
Query: 119 KKNIEHIYVMGGAIRSDCFNSTNSSQS---EQCDSIGNLYPD-DSNPYAEFNIFSDPFAA 174
KKN+EH+Y+MGG IRS + N+S S +C GN+ + ++NPYAE+NIF DPFAA
Sbjct: 203 KKNVEHVYIMGGVIRSKTCCTKNASSSCIPSKCGDTGNVLTNYNANPYAEYNIFGDPFAA 262
Query: 175 YTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPF 234
Y V+HSGIP+T++PLDAT TIP+SE FF EFE+ Q+TYEAQYCF+SLKM DTW + F
Sbjct: 263 YKVIHSGIPITLVPLDATNTIPISEEFFDEFEKSQDTYEAQYCFKSLKMAHDTWFDNQ-F 321
Query: 235 HEAYCMWDSFMAGVALSIMLNSSSHNGENACSEMEYMNLTVVTSNEPYGISDGSNPLIDG 294
+ +Y MWDSF +GVA+SIM NS+ GEN +EMEY+N+TV+TSN+PYGISDGSNPL DG
Sbjct: 322 YTSYFMWDSFTSGVAVSIMRNSNRKKGENEFAEMEYINITVITSNKPYGISDGSNPLFDG 381
Query: 295 LEVPKFNVQKNGVHSGHVQTGMQDPFC-LESGKAKCQDGYIKEVKGPEAVRVLVATKAKP 353
L+VPKFN++K GVHSGH+Q G+ DPFC +++GK +CQDGY KEV G E+V+VLVATKAKP
Sbjct: 382 LKVPKFNLKKGGVHSGHIQQGLTDPFCFVKNGKGRCQDGYTKEVNGQESVKVLVATKAKP 441
Query: 354 SQDLGSLLEKEFYLSFLNALNFPQQAGRFNISTQFPYYEEILRKPDFGKKLMGKPVVFDI 413
++D+ S L++E++ SFLN L PQQAG+FN +TQFPYYEE+ KPDF K++GKPVVFD+
Sbjct: 442 NKDIRSSLDREYFKSFLNVLKQPQQAGKFNFTTQFPYYEEVTHKPDFWNKILGKPVVFDM 501
Query: 414 DMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIPVGLGD 473
DMSAGDFLAL YLLK+PVE+INLK I+VS TGWA +AT+DV+YDLLHMMGRDDI VG+GD
Sbjct: 502 DMSAGDFLALSYLLKVPVEVINLKAIIVSPTGWANAATIDVIYDLLHMMGRDDIKVGIGD 561
Query: 474 VFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENSVRFGA 533
FA+ + N F P+G CKY KAIP G+GGFLDSDTL+GLARDLPRSPRRYTAENS +FGA
Sbjct: 562 FFAMNQSN--FSPVGDCKYVKAIPHGNGGFLDSDTLFGLARDLPRSPRRYTAENSKKFGA 619
Query: 534 SQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYI 593
+D D PELRQP A+++W+SI+++++PGSK+T+LTNGPLTNLA+++ ++N SS+IQ+VY+
Sbjct: 620 PRDTDHPELRQPQAMEIWESILQTLKPGSKVTVLTNGPLTNLAKVVSIKNISSIIQEVYV 679
Query: 594 VGGNKGQ-DNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFF 652
+GG+ + N+KGNVF+VPS+KYAEFNMFLDPLAAK VF+S++ I LIPL +QR+ +SF
Sbjct: 680 MGGHISRSSNDKGNVFSVPSNKYAEFNMFLDPLAAKTVFQSEVNITLIPLGIQRKASSFS 739
Query: 653 KILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVIL--GGNPHLN 710
L+ L +KTPE+VFS+RLL L L++ HH YHH+DTFLGE+LGAV+L G + L+
Sbjct: 740 STLNWLSRTEKTPEAVFSKRLLSRLRRLKKIHHRYHHMDTFLGEILGAVVLANGHSSLLD 799
Query: 711 QTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEVLGDHKQSAVI 770
+++KS++++++G S G+++V+++ GKLV++L ++ Y++ +A+ LGD QSA +
Sbjct: 800 AKFELKSVKLLAEGIESTDGKMVVDEKYGKLVRILRHVDAKTYHEIYAKRLGDPNQSAKV 859
Query: 771 GSFYDQEKTWNTP 783
GSF +Q++ W+ P
Sbjct: 860 GSFKEQKRKWSHP 872
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 139/310 (44%), Gaps = 61/310 (19%)
Query: 436 LKGILVSSTGWATSA-TVDVVYDLLHMMGRDDIPVGLGDVFAVGEVNPKFPPIGG----- 489
L+G+ +S+ W + V+ VYD+L+MMGRDDI VG+G + P +GG
Sbjct: 57 LEGVTLSANAWTNAGHAVNQVYDILYMMGRDDIAVGVGGEGGILPNGTILPNVGGYLPII 116
Query: 490 ---------CKYAKAIPLGSGGFLDSDTLYGLARD-LPRSPRRYTAENSVRFGASQDNDD 539
C+Y +AIP+G GG LD DT G+ + LP+ R+YT
Sbjct: 117 EQGMTTAGYCRYRQAIPVGFGGRLDIDTNLGIRKAFLPQGKRKYTP-------------- 162
Query: 540 PELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSV---IQDVYIVGG 596
LRQP V +++ I G IT++ G TNLA I L N+ + ++ VYI+GG
Sbjct: 163 --LRQPTTQQV---LIDKISAGP-ITLIVTGAHTNLA--IFLMNNPHLKKNVEHVYIMGG 214
Query: 597 N----------------KGQDNEKGNVFT-VPSSKYAEFNMFLDPLAAKAVFESKLEIKL 639
+ + GNV T ++ YAE+N+F DP AA V S + I L
Sbjct: 215 VIRSKTCCTKNASSSCIPSKCGDTGNVLTNYNANPYAEYNIFGDPFAAYKVIHSGIPITL 274
Query: 640 IPLHMQRRV---ASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGE 696
+PL + FF K +D + S ++ Q + SY D+F
Sbjct: 275 VPLDATNTIPISEEFFDEFEKSQDTYEAQYCFKSLKMAHDTWFDNQFYTSYFMWDSFTSG 334
Query: 697 VLGAVILGGN 706
V +++ N
Sbjct: 335 VAVSIMRNSN 344
>gi|298205015|emb|CBI34322.3| unnamed protein product [Vitis vinifera]
Length = 858
Score = 1055 bits (2729), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/789 (66%), Positives = 623/789 (78%), Gaps = 31/789 (3%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQR--LYV 58
MM RDDIPVGVGGEGGILPNGTILPDVGGY PIIDQG STAG CRYRQAIP+G + L +
Sbjct: 94 MMGRDDIPVGVGGEGGILPNGTILPDVGGYLPIIDQGTSTAGGCRYRQAIPMGAKGLLDI 153
Query: 59 NTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHL 118
+T YGLRK FLPQG R Y+PL QPTAQQV+INA+SAGPITVF++G+HTNFAIFLM NP L
Sbjct: 154 DTMYGLRKGFLPQGSRGYSPLEQPTAQQVMINAVSAGPITVFLLGTHTNFAIFLMTNPQL 213
Query: 119 KKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVL 178
KKNIEHIYVMGG+I C D NPYAEFN F DPFAAY VL
Sbjct: 214 KKNIEHIYVMGGSIWPHC---------------------DDNPYAEFNFFEDPFAAYEVL 252
Query: 179 HSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPFHEAY 238
HSGIPVT+IPLDAT TIP++ENFF FE++QNTYEAQY F+++KM DTW + FHE
Sbjct: 253 HSGIPVTLIPLDATNTIPITENFFKAFEQKQNTYEAQYSFKAMKMAHDTWFNNH-FHENV 311
Query: 239 CMWDSFMAGVALSIMLNSSSHNGENACSEMEYMNLTVVTSNEPYGISDGSNPLIDGLEVP 298
MWD FM GVALSIM NS++ NGEN + MEY N+TVVTSNEPYGISDGSNP DG
Sbjct: 312 FMWDYFMVGVALSIMRNSANDNGENEFAVMEYTNITVVTSNEPYGISDGSNPFNDGSTTS 371
Query: 299 KFNVQKNGVHSGHVQTGMQDPFCLESG-KAKCQDGYIKEVKGPEAVRVLVATKAKPSQDL 357
KF KNGVHSGHVQTG +DPFCLE K +C+DGY EV GP++VRVLVAT+AK +QD
Sbjct: 372 KF---KNGVHSGHVQTGNRDPFCLEKNQKGRCKDGYTMEVTGPDSVRVLVATEAKRNQDA 428
Query: 358 GSLLEKEFYLSFLNALNFPQQAGRFNISTQFPYYEEILRKPDFGKKLMGKPVVFDIDMSA 417
SLL++EFY SFL+ ++ PQQ+GRFNISTQFPYY EI+ KPDFG + GKP VFD+DMS
Sbjct: 429 NSLLDREFYKSFLDVISRPQQSGRFNISTQFPYYGEIVYKPDFGTRKKGKPFVFDMDMST 488
Query: 418 GDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIPVGLGDVFAV 477
GD +AL+YLLKLPVE I+LKGILVS GWA++AT+D+VYD+LHMMGRDDIPVGLGDVFA+
Sbjct: 489 GDLIALLYLLKLPVEQIDLKGILVSPNGWASAATIDIVYDVLHMMGRDDIPVGLGDVFAI 548
Query: 478 GEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENSVRFGASQDN 537
G+ FP G CKY KAIPLG GG LDSDTLYG ARDLPRSPRRYTAENSV+FGA +D
Sbjct: 549 GQKEQTFPLFGDCKYRKAIPLGGGGLLDSDTLYGFARDLPRSPRRYTAENSVKFGAPRDT 608
Query: 538 DDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGN 597
D PE+RQPLA++VWKSIV+S +PGSKIT LTNGPLTNLAQ+I + +SSVIQD+ IVGG+
Sbjct: 609 DHPEVRQPLALEVWKSIVDSTDPGSKITYLTNGPLTNLAQVISSERASSVIQDLCIVGGH 668
Query: 598 KGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHK 657
DN+ GN+FTVPS+++AEFNMFLDPLA K V +SKL + LIPL +QR V+SF +L +
Sbjct: 669 I--DNKTGNLFTVPSNEFAEFNMFLDPLAVKVVMDSKLNVTLIPLGVQRSVSSFNHVLQR 726
Query: 658 LRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGG-NPHLNQTYKIK 716
L + +TPE+ F+Q LL L LQQ YHH+DTFLGE+LGAV+L G +P LNQ ++
Sbjct: 727 LEHKNQTPEAAFTQNLLSRLSQLQQKSDRYHHMDTFLGEILGAVVLAGDDPLLNQAFQHM 786
Query: 717 SLEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEVLGDHKQSAVIGSFYDQ 776
L+I+++GD+ GQI+++++QG+LVKVL S+N YYDHFA+VL + QSA IG+F +Q
Sbjct: 787 PLKILANGDVKNDGQIVIDEKQGRLVKVLRSVNTTEYYDHFADVLNNQSQSARIGNFAEQ 846
Query: 777 EKTWNTPPN 785
++ W TPPN
Sbjct: 847 KRIWTTPPN 855
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 151/309 (48%), Gaps = 55/309 (17%)
Query: 407 KPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSAT-VDVVYDLLHMMGRD 465
+ ++ D D+ DF +L YLLK NL+ I +S+ GW S ++ +YDLL MMGRD
Sbjct: 39 RRILMDTDVDMDDFFSLFYLLKENTSEFNLEAITLSANGWCDSGHGINHIYDLLFMMGRD 98
Query: 466 DIPVGL---GDVFAVGEVNPK---FPPI--------GGCKYAKAIPLGSGGFLDSDTLYG 511
DIPVG+ G + G + P + PI GGC+Y +AIP+G+ G LD DT+YG
Sbjct: 99 DIPVGVGGEGGILPNGTILPDVGGYLPIIDQGTSTAGGCRYRQAIPMGAKGLLDIDTMYG 158
Query: 512 LARD-LPRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNG 570
L + LP+ R Y+ L QP A V ++ ++ G IT+ G
Sbjct: 159 LRKGFLPQGSRGYSP----------------LEQPTAQQV---MINAVSAGP-ITVFLLG 198
Query: 571 PLTNLAQIIGLQNS--SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAK 628
TN A I + N I+ +Y++GG+ + + YAEFN F DP AA
Sbjct: 199 THTNFA-IFLMTNPQLKKNIEHIYVMGGSIWPHCD--------DNPYAEFNFFEDPFAAY 249
Query: 629 AVFESKLEIKLIPLHMQRRV---ASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHH 685
V S + + LIPL + +FFK + ++ T E+ +S + ++ M +
Sbjct: 250 EVLHSGIPVTLIPLDATNTIPITENFFKAFEQ---KQNTYEAQYSFKAMK--MAHDTWFN 304
Query: 686 SYHHVDTFL 694
++ H + F+
Sbjct: 305 NHFHENVFM 313
>gi|224144494|ref|XP_002336154.1| predicted protein [Populus trichocarpa]
gi|222874440|gb|EEF11571.1| predicted protein [Populus trichocarpa]
Length = 872
Score = 1047 bits (2708), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/792 (63%), Positives = 629/792 (79%), Gaps = 24/792 (3%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQR--LYV 58
MM RDD+ VG+GGEGGI +G I PDVGG+ PI++QG STAG CRYRQAIPVG R L +
Sbjct: 88 MMGRDDVSVGMGGEGGIAEDGHIFPDVGGFLPIVEQGKSTAGGCRYRQAIPVGPRGRLDL 147
Query: 59 NTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHL 118
++NYGLR+AFLPQG RKY+PL QPTAQQVL ISAGPITV + G+HTN +FLMNNPHL
Sbjct: 148 DSNYGLRRAFLPQGSRKYSPLEQPTAQQVLTEKISAGPITVLITGAHTNIGVFLMNNPHL 207
Query: 119 KKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPD-DSNPYAEFNIFSDPFAAYTV 177
K NIEHIYVMGGA+RSD GNL+ D SNPYAEFNIF+DPFAAY V
Sbjct: 208 KNNIEHIYVMGGAVRSD----------------GNLFADLYSNPYAEFNIFADPFAAYQV 251
Query: 178 LHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPFHEA 237
LHSGIP+T++PLDAT TIP +ENFF FE+ Q+TYEAQYCF+SLKM RDT + F+ +
Sbjct: 252 LHSGIPLTLVPLDATNTIPTNENFFKAFEQNQHTYEAQYCFRSLKMTRDTRTDDH-FYTS 310
Query: 238 YCMWDSFMAGVALSIMLNSSSHNGENACSEMEYMNLTVVTSNEPYGISDGSNPLIDGLEV 297
+ MWD+F AGVA+S M NS + +GEN +EMEYMN+TVVTSNEP+GISD SNP EV
Sbjct: 311 HYMWDTFAAGVAVSTMRNSQNRDGENEFAEMEYMNITVVTSNEPFGISDSSNPFFYHREV 370
Query: 298 PKFNVQKNGVHSGHVQTGMQDPFCL-ESGKAKCQDGYIKEVKGPEAVRVLVATKAKPSQD 356
P+FN+ K GVHSGHVQTG++DP CL E+GK +C+DGY KEV G EAVRVLVAT+AKP+ D
Sbjct: 371 PRFNLTKGGVHSGHVQTGLRDPLCLGENGKGRCEDGYTKEVSGAEAVRVLVATRAKPNPD 430
Query: 357 LGSLLEKEFYLSFLNALNFPQQAGRFNISTQFPYYEEILRKPDFGKKLMGKPVVFDIDMS 416
S L++ FY SFL+ LN PQQ+GRFN +TQFP+Y+E+L +PDFG K +GKPVVFD+DMS
Sbjct: 431 RNSTLDRAFYKSFLDVLNDPQQSGRFNFTTQFPHYKEVLYRPDFGTKGLGKPVVFDMDMS 490
Query: 417 AGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIPVGLGDVFA 476
GDFLAL YLLK+PVE IN+KGI+VS TGWA +AT+D+VYD LHMMGRDDIPVGLGDVFA
Sbjct: 491 VGDFLALFYLLKVPVEEINVKGIIVSPTGWANAATIDIVYDFLHMMGRDDIPVGLGDVFA 550
Query: 477 VGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENSVRFGASQD 536
+ + +P F +G CKY KAIP GSGG LDSDTLYGLARDLPRSPRRYTAENSV++GA +D
Sbjct: 551 MNQSDPVFSAVGDCKYLKAIPHGSGGLLDSDTLYGLARDLPRSPRRYTAENSVKYGAPRD 610
Query: 537 NDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQII-GLQNSSSVIQDVYIVG 595
D PELRQPLA+++W SIV +++PGSKITILTNGPLT+LA+II N+SSVIQDVY+VG
Sbjct: 611 TDHPELRQPLALEIWDSIVRTLDPGSKITILTNGPLTSLAKIIQNENNTSSVIQDVYVVG 670
Query: 596 GN-KGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKI 654
G+ D +KGNV T+ S++Y E NMFLDPLAAK VFES L+I LIPL +QRRV+SF +I
Sbjct: 671 GHISHSDTDKGNVLTIDSNEYTELNMFLDPLAAKTVFESSLDITLIPLGVQRRVSSFPEI 730
Query: 655 LHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGGN-PHLNQTY 713
L +LR TPE++F+QRLL L L+++H Y +DTFLGE+LGAV+L GN L+ T+
Sbjct: 731 LERLRKINTTPEALFAQRLLSRLYHLKETHRRYQQMDTFLGEILGAVVLAGNFSKLDPTF 790
Query: 714 KIKSLEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEVLGDHKQSAVIGSF 773
++K ++++++G S+ G+I+++++QG+LVK++E +++ YYD F E L +QSAVIGSF
Sbjct: 791 RVKPIKVLAEGVESEDGRIVIDEKQGRLVKIVEKVDLGAYYDLFTEQLRSKEQSAVIGSF 850
Query: 774 YDQEKTWNTPPN 785
+Q + W+ P N
Sbjct: 851 DEQRRNWSVPLN 862
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 142/300 (47%), Gaps = 48/300 (16%)
Query: 421 LALIYLLKLPVELINLKGILVSSTGWATSAT-VDVVYDLLHMMGRDDIPVGLGDVFAVGE 479
AL YLLKL L+ + V++ W + V +YD+L+MMGRDD+ VG+G + E
Sbjct: 47 FALFYLLKLNRSRFGLEAVTVNTNSWTDAGHGVSQIYDILYMMGRDDVSVGMGGEGGIAE 106
Query: 480 VNPKFPPI--------------GGCKYAKAIPLGSGGFLDSDTLYGLARD-LPRSPRRYT 524
FP + GGC+Y +AIP+G G LD D+ YGL R LP+ R+Y+
Sbjct: 107 DGHIFPDVGGFLPIVEQGKSTAGGCRYRQAIPVGPRGRLDLDSNYGLRRAFLPQGSRKYS 166
Query: 525 AENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS 584
L QP A V + E I G IT+L G TN+ + L N+
Sbjct: 167 P----------------LEQPTAQQV---LTEKISAGP-ITVLITGAHTNIG--VFLMNN 204
Query: 585 SSV---IQDVYIVGGNKGQDNEKGNVFT-VPSSKYAEFNMFLDPLAAKAVFESKLEIKLI 640
+ I+ +Y++GG D GN+F + S+ YAEFN+F DP AA V S + + L+
Sbjct: 205 PHLKNNIEHIYVMGGAVRSD---GNLFADLYSNPYAEFNIFADPFAAYQVLHSGIPLTLV 261
Query: 641 PLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSY--HHV-DTFLGEV 697
PL + + + T E+ + R L+ + H Y H++ DTF V
Sbjct: 262 PLDATNTIPTNENFFKAFEQNQHTYEAQYCFRSLKMTRDTRTDDHFYTSHYMWDTFAAGV 321
>gi|224100283|ref|XP_002311814.1| predicted protein [Populus trichocarpa]
gi|222851634|gb|EEE89181.1| predicted protein [Populus trichocarpa]
Length = 921
Score = 1043 bits (2697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/822 (61%), Positives = 639/822 (77%), Gaps = 32/822 (3%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVG--QRLYV 58
MM RDD+ VG+GGEGGI +G ILPDVGGY PI++QG +TAG CRYRQAIPVG RL +
Sbjct: 101 MMGRDDLSVGMGGEGGIKEDGHILPDVGGYLPIVEQGNATAGGCRYRQAIPVGLGGRLDI 160
Query: 59 NTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHL 118
++NYG+RKAFLPQG RKY+PL+QPTAQQVLI +SAGPIT+F++G+HTN IFLM NPHL
Sbjct: 161 DSNYGIRKAFLPQGSRKYSPLQQPTAQQVLIEKVSAGPITIFIIGAHTNIGIFLMKNPHL 220
Query: 119 KKNIEHIYVMGGAIRSD----CF--NSTNSSQSEQCDSIGNLYPD-DSNPYAEFNIFSDP 171
KKNI+HIYVMGG +RS C N+++S Q QC + GNL+ D SNPY EFNIF DP
Sbjct: 221 KKNIQHIYVMGGGVRSKNPTGCCPNNASSSCQPRQCGNPGNLFTDYTSNPYGEFNIFGDP 280
Query: 172 FAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGS 231
FAAY V HSGIPVT++PLDAT TIP++ENFF FE+ Q+TYEAQYCFQSLKM RDTW
Sbjct: 281 FAAYQVFHSGIPVTLVPLDATNTIPINENFFEAFEQNQHTYEAQYCFQSLKMARDTWFDD 340
Query: 232 PPFHEAYCMWDSFMAGVALSIMLNSSSHNGENACSEMEYMNLTVVTSNEPYGISDGSNPL 291
F+ +Y MWDSF +GVA+SIM + NGEN +EMEYMN+TVVTSNEPYGI+DGSNP
Sbjct: 341 Q-FYTSYFMWDSFTSGVAVSIMRTLHNQNGENEFAEMEYMNITVVTSNEPYGINDGSNPF 399
Query: 292 IDGLEVPKFNVQKNGVHSGHVQTGMQDPFCL-ESGKAKCQDGYIKEVKGPEAVRVLVATK 350
+ +VPKFN+ K GVHSGHVQTG++DPFC+ ++GK +C+DGY +EV +AVRVLVAT+
Sbjct: 400 FNDRKVPKFNLVKGGVHSGHVQTGLRDPFCIVQNGKGRCKDGYTEEVTSSDAVRVLVATR 459
Query: 351 AKPSQDLGSLLEKEFYLSFLNALNFPQQAGRFNISTQFPYYEEILRKPDFGKKLMGKPVV 410
AKP+ D S+L++ ++ SFL+ LN P Q GRFN +TQFP+Y+++ KPDFG K +GKPVV
Sbjct: 460 AKPNPDSNSILDRAYFKSFLDVLNHPHQTGRFNFTTQFPHYKKVFYKPDFGTKRLGKPVV 519
Query: 411 FDIDMSAGDFLALIYLLKLPVELINLKG------------------ILVSSTGWATSATV 452
FD+DMSAGDFLAL YLLK+PVE INLK I+V+ GWA +AT+
Sbjct: 520 FDMDMSAGDFLALFYLLKVPVERINLKASAFNFLDSLQQAYAISPAIIVTPVGWANAATI 579
Query: 453 DVVYDLLHMMGRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGL 512
D+VYD LHMMGRDDIPVGLG+VFA+ + +P F +G CKY KAIP GSGG LDSDTLYGL
Sbjct: 580 DIVYDFLHMMGRDDIPVGLGEVFAMNQSDPVFSAVGDCKYLKAIPHGSGGLLDSDTLYGL 639
Query: 513 ARDLPRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPL 572
ARDLPRSPRRYTAENSV++GA +D D PELRQPLA+++W SIV +++PGSKITILTNGPL
Sbjct: 640 ARDLPRSPRRYTAENSVKYGAPRDTDHPELRQPLALEIWDSIVRTLDPGSKITILTNGPL 699
Query: 573 TNLAQII-GLQNSSSVIQDVYIVGGNKGQ-DNEKGNVFTVPSSKYAEFNMFLDPLAAKAV 630
T+LA+II N+SSVIQDVY+VGG+ D +KGNV T+ S++Y E NMFLDPLAAK V
Sbjct: 700 TSLAKIIQNENNTSSVIQDVYVVGGHISHSDTDKGNVLTIDSNEYTELNMFLDPLAAKTV 759
Query: 631 FESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHV 690
FES L+I LIPL +QRRV+SF +IL +LR TPE++F+QRLL L L+++H Y +
Sbjct: 760 FESSLDITLIPLGVQRRVSSFPEILERLRKINTTPEALFAQRLLSRLYHLKETHRRYQQM 819
Query: 691 DTFLGEVLGAVILGGN-PHLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVLESLN 749
DTFLGE+LGAV+L GN L+ T+++K ++++++G S+ G+I+++++QG+LVK++E ++
Sbjct: 820 DTFLGEILGAVVLAGNFSKLDPTFRVKPIKVLAEGVESEDGRIVIDEKQGRLVKIVEKVD 879
Query: 750 VAVYYDHFAEVLGDHKQSAVIGSFYDQEKTWNTPPNGIDRLH 791
+ YYD F E L +QSAVIGSF +Q + W+ P N H
Sbjct: 880 LGAYYDLFTEQLRSKEQSAVIGSFDEQRRNWSVPLNLTKGFH 921
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 148/337 (43%), Gaps = 77/337 (22%)
Query: 422 ALIYLLKLPV---------ELINL------KGILVSSTGWATSA-TVDVVYDLLHMMGRD 465
AL+YLLKL LI L + + +++ W + + +YD+L+MMGRD
Sbjct: 46 ALLYLLKLNRSEFELEVHEHLITLAVIALVQAVTINTNAWTDAGHAANQIYDILYMMGRD 105
Query: 466 DIPVGLGDVFAVGEVNPKFPPI--------------GGCKYAKAIPLGSGGFLDSDTLYG 511
D+ VG+G + E P + GGC+Y +AIP+G GG LD D+ YG
Sbjct: 106 DLSVGMGGEGGIKEDGHILPDVGGYLPIVEQGNATAGGCRYRQAIPVGLGGRLDIDSNYG 165
Query: 512 LARD-LPRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNG 570
+ + LP+ R+Y+ L+QP A V ++E + G ITI G
Sbjct: 166 IRKAFLPQGSRKYSP----------------LQQPTAQQV---LIEKVSAGP-ITIFIIG 205
Query: 571 PLTNLAQIIGLQNS--SSVIQDVYIVGGNKGQDN-------------------EKGNVFT 609
TN+ I ++N IQ +Y++GG N GN+FT
Sbjct: 206 AHTNIG-IFLMKNPHLKKNIQHIYVMGGGVRSKNPTGCCPNNASSSCQPRQCGNPGNLFT 264
Query: 610 -VPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV---ASFFKILHKLRDRKKTP 665
S+ Y EFN+F DP AA VF S + + L+PL + +FF+ + + +
Sbjct: 265 DYTSNPYGEFNIFGDPFAAYQVFHSGIPVTLVPLDATNTIPINENFFEAFEQNQHTYEAQ 324
Query: 666 ESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVI 702
S ++ + Q + SY D+F V +++
Sbjct: 325 YCFQSLKMARDTWFDDQFYTSYFMWDSFTSGVAVSIM 361
>gi|357478551|ref|XP_003609561.1| Pyrimidine-specific ribonucleoside hydrolase rihB [Medicago
truncatula]
gi|355510616|gb|AES91758.1| Pyrimidine-specific ribonucleoside hydrolase rihB [Medicago
truncatula]
Length = 888
Score = 1040 bits (2689), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/798 (61%), Positives = 644/798 (80%), Gaps = 13/798 (1%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVG--QRLYV 58
MM RDD+ VG+GGEGGIL NGTILP+VGGY PII+QGM+T G CRYRQAIPVG RL +
Sbjct: 80 MMGRDDVAVGIGGEGGILSNGTILPNVGGYLPIIEQGMTTIGGCRYRQAIPVGLGGRLDI 139
Query: 59 NTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHL 118
+ NYG+RK+FLPQG RKY PL QPTAQQVLI +SAGP T+F+MG+HTN AIFLMNNPHL
Sbjct: 140 DANYGIRKSFLPQGKRKYTPLEQPTAQQVLIEKVSAGPTTLFMMGAHTNVAIFLMNNPHL 199
Query: 119 KKNIEHIYVMGGAIRSD----CF--NSTNSSQSEQCDSIGNLYPD-DSNPYAEFNIFSDP 171
KKN+EHIY+MGG +RS C N++++ QC GN++ D ++NPYAEFNIF DP
Sbjct: 200 KKNVEHIYIMGGGVRSSNPTGCCPKNASSNCVPRQCGDHGNMFTDYNTNPYAEFNIFGDP 259
Query: 172 FAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGS 231
FAAY V+HSGIPVT++PLDA+ TIP++ FF FE+ Q+T+EAQYCF+SLK+ RDTW +
Sbjct: 260 FAAYQVIHSGIPVTLVPLDASNTIPITAQFFDAFEKSQDTHEAQYCFKSLKISRDTWFDN 319
Query: 232 PPFHEAYCMWDSFMAGVALSIMLNSSSHNGENACSEMEYMNLTVVTSNEPYGISDGSNPL 291
F+ +Y MWDSFM GVA+SIM ++H G+N +EMEYMN+TV+TSN+PYGISDGSNPL
Sbjct: 320 E-FYSSYFMWDSFMTGVAVSIMSKPNNHKGDNEFAEMEYMNITVITSNKPYGISDGSNPL 378
Query: 292 IDGLEVPKFNVQKNGVHSGHVQTGMQDPFC-LESGKAKCQDGYIKEVKGPEAVRVLVATK 350
+GL+VPKFN++K GVHSGH+Q G++DP C +E+GK KCQDGY KE GP +VRVLVATK
Sbjct: 379 FNGLKVPKFNLEKGGVHSGHIQQGLRDPLCFVENGKGKCQDGYTKEEGGPGSVRVLVATK 438
Query: 351 AKPSQDLGSLLEKEFYLSFLNALNFPQQAGRFNISTQFPYYEEILRKPDFGKKLMGKPVV 410
AKP++D+GS L++E+++ FL+ L P+QAGR+N +TQFPYY+E+ KP+F K +GKPVV
Sbjct: 439 AKPNRDVGSSLDREYFIRFLDVLKQPRQAGRYNFTTQFPYYKEVTYKPNFQNKKLGKPVV 498
Query: 411 FDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIPVG 470
FD+DMSAGDFLAL YLLK+PV++I+LK I+VS TGWA +AT+D++YD+LHMMGRDDIPVG
Sbjct: 499 FDMDMSAGDFLALFYLLKVPVQVIDLKAIIVSPTGWANAATIDIIYDILHMMGRDDIPVG 558
Query: 471 LGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENSVR 530
LGDVFA+ + +P F +GGCKY KAIP G+GG++DSDTLYGLAR LPRSPRRYT ENSV+
Sbjct: 559 LGDVFAMNQRDPIFGAVGGCKYVKAIPHGNGGYIDSDTLYGLARYLPRSPRRYTGENSVK 618
Query: 531 FGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQD 590
FGA +D D PELRQPLA++VW+S++++++PGS IT+LTNGPLTNLA ++ ++N SS IQ+
Sbjct: 619 FGAPRDTDHPELRQPLAMEVWESVLQTMKPGSNITVLTNGPLTNLANVVSVKNISSRIQE 678
Query: 591 VYIVGGNKGQDNE-KGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVA 649
V++VGG+ + E KGNVF+VPS++YAEFNMFLDPLAAK VFES+++I LIPL QR+V+
Sbjct: 679 VFVVGGHISSNAEDKGNVFSVPSNQYAEFNMFLDPLAAKTVFESEVKITLIPLSTQRQVS 738
Query: 650 SFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGG-NPH 708
SF I+ +L +KT E VF++ LL L L+Q+++ Y+H+DTFLGE+LGAV+L +
Sbjct: 739 SFATIIGRLEGTRKTSEVVFTKSLLSSLNRLKQTNNRYYHMDTFLGEILGAVVLADRSSS 798
Query: 709 LNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEVLGDHKQSA 768
LN +++K +++++ G S G+I+V+++ GKLV++L ++ YY+ + LGD QSA
Sbjct: 799 LNPKFEVKPIKVLASGIESTDGKIVVDEKHGKLVRILSNVEEKAYYNMYVNKLGDLYQSA 858
Query: 769 VIGSFYDQEKTWNTPPNG 786
+GSF +Q + W+ P +G
Sbjct: 859 KVGSFEEQMRNWSHPHDG 876
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 145/315 (46%), Gaps = 64/315 (20%)
Query: 436 LKGILVSSTGWATSA-TVDVVYDLLHMMGRDDIPVGL---GDVFAVGEVNPK-------- 483
L+ + +S+ W ++ V+ +YDLL+MMGRDD+ VG+ G + + G + P
Sbjct: 54 LEAVTISANSWTSAGHAVNQIYDLLYMMGRDDVAVGIGGEGGILSNGTILPNVGGYLPII 113
Query: 484 ---FPPIGGCKYAKAIPLGSGGFLDSDTLYGLARD-LPRSPRRYTAENSVRFGASQDNDD 539
IGGC+Y +AIP+G GG LD D YG+ + LP+ R+YT
Sbjct: 114 EQGMTTIGGCRYRQAIPVGLGGRLDIDANYGIRKSFLPQGKRKYTP-------------- 159
Query: 540 PELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSV---IQDVYIVGG 596
L QP A V ++E + G T+ G TN+A I L N+ + ++ +YI+GG
Sbjct: 160 --LEQPTAQQV---LIEKVSAGP-TTLFMMGAHTNVA--IFLMNNPHLKKNVEHIYIMGG 211
Query: 597 NKGQDN-------------------EKGNVFT-VPSSKYAEFNMFLDPLAAKAVFESKLE 636
N + GN+FT ++ YAEFN+F DP AA V S +
Sbjct: 212 GVRSSNPTGCCPKNASSNCVPRQCGDHGNMFTDYNTNPYAEFNIFGDPFAAYQVIHSGIP 271
Query: 637 IKLIPLHMQRRV---ASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTF 693
+ L+PL + A FF K +D + S ++ + + + SY D+F
Sbjct: 272 VTLVPLDASNTIPITAQFFDAFEKSQDTHEAQYCFKSLKISRDTWFDNEFYSSYFMWDSF 331
Query: 694 LGEVLGAVILGGNPH 708
+ V +++ N H
Sbjct: 332 MTGVAVSIMSKPNNH 346
>gi|356564566|ref|XP_003550523.1| PREDICTED: uncharacterized protein LOC100788041 [Glycine max]
Length = 878
Score = 1038 bits (2685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/795 (62%), Positives = 640/795 (80%), Gaps = 13/795 (1%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVG--QRLYV 58
MM RDD+ VGVGGEGGIL NGTILP+VGGY PII+QGM+T G CRYR+AIPVG RL +
Sbjct: 81 MMGRDDVAVGVGGEGGILQNGTILPNVGGYLPIIEQGMTTVGGCRYRRAIPVGLGGRLDI 140
Query: 59 NTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHL 118
+ NYG+RKAFLPQG RKY PL+QPTAQ+VLI ISAGPIT+ V+G+HTN AIFLMNNPHL
Sbjct: 141 DANYGIRKAFLPQGTRKYTPLQQPTAQEVLIEKISAGPITLLVIGAHTNIAIFLMNNPHL 200
Query: 119 KKNIEHIYVMGGAIRSD----CF--NSTNSSQSEQCDSIGNLYPD-DSNPYAEFNIFSDP 171
KKN+EHIY+MGG +RS C N++++ QC GN++ D ++NPYAEFNIF DP
Sbjct: 201 KKNVEHIYIMGGGVRSSNPTGCCPKNASSTCVPRQCGERGNMFTDYNTNPYAEFNIFGDP 260
Query: 172 FAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGS 231
FAAY V+HSGIP+T++PLDAT TIP++E FF FE+ Q+TYEAQY F+SLKM RDTW +
Sbjct: 261 FAAYQVIHSGIPITLVPLDATNTIPINEQFFDAFEKSQDTYEAQYIFKSLKMARDTWFDN 320
Query: 232 PPFHEAYCMWDSFMAGVALSIMLNSSSHNGENACSEMEYMNLTVVTSNEPYGISDGSNPL 291
F+ +Y MWDSF AG+A+SIM ++ GEN +EMEYMN+TV+TSN+PYG+SDGSNP
Sbjct: 321 E-FYSSYFMWDSFAAGIAVSIMSKPNNQKGENEFAEMEYMNITVITSNKPYGVSDGSNPF 379
Query: 292 IDGLEVPKFNVQKNGVHSGHVQTGMQDPFC-LESGKAKCQDGYIKEVKGPEAVRVLVATK 350
DG VPKFN++K GVHSGHVQ G++DP C + +GK KCQDGY EV GP++VRVLVATK
Sbjct: 380 FDGRRVPKFNLEKGGVHSGHVQQGLRDPLCFVNNGKGKCQDGYTAEVSGPDSVRVLVATK 439
Query: 351 AKPSQDLGSLLEKEFYLSFLNALNFPQQAGRFNISTQFPYYEEILRKPDFGKKLMGKPVV 410
AKP++D+GS L++E+++SFLN L PQ GRFN +TQFPYY+E+ KPDF K GKPVV
Sbjct: 440 AKPNKDVGSSLDREYFISFLNVLKHPQNTGRFNFTTQFPYYKEVTYKPDFENKTPGKPVV 499
Query: 411 FDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIPVG 470
FD+DMSAGDFLAL YLLK+PV++I+LK I+VS TGW SAT+DV+YDLLHMMGRDDIPVG
Sbjct: 500 FDMDMSAGDFLALFYLLKVPVQVIDLKAIIVSPTGWTNSATIDVIYDLLHMMGRDDIPVG 559
Query: 471 LGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENSVR 530
LGDVFA+ + +P FPP+G CKY KAIP GSGG LDSDTLYGLARDLPRSPRRYTAENSV+
Sbjct: 560 LGDVFAMNQSDPIFPPVGECKYVKAIPHGSGGLLDSDTLYGLARDLPRSPRRYTAENSVK 619
Query: 531 FGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQD 590
FGA +D D PELRQPLA++VW S+++ +P SKIT+LTNGPLTNLA+++ ++N S IQ+
Sbjct: 620 FGAPRDTDHPELRQPLAMEVWNSVLQRTKPRSKITVLTNGPLTNLAKVVSVKNIRSRIQE 679
Query: 591 VYIVGGNKGQD-NEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVA 649
VY+VGG+ + N+KG++F+VPS++YAEFNMFLDPLAAK VFES++ I LIPL+ QRRV
Sbjct: 680 VYVVGGHISSNVNDKGDIFSVPSNQYAEFNMFLDPLAAKIVFESEVNITLIPLNTQRRVR 739
Query: 650 SFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILG-GNPH 708
SF I+ +LR +TPE+VFS+RLL L L+Q+H+ Y H+DTFLGE+LGAV+L +
Sbjct: 740 SFSTIIGELRRTPRTPEAVFSERLLSRLYRLKQTHNRYQHMDTFLGEILGAVVLAESHSG 799
Query: 709 LNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEVLGDHKQSA 768
LN ++ K++++++DG+ S G+ +V+++ GKL+++L S++ Y+ +A+ LGD QSA
Sbjct: 800 LNPKFEAKAVKVLADGNESSDGKTVVDEKGGKLMRILSSVDAKAYHSLYAKKLGDENQSA 859
Query: 769 VIGSFYDQEKTWNTP 783
IGSF +Q + W+ P
Sbjct: 860 KIGSFEEQRRKWSHP 874
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/323 (31%), Positives = 156/323 (48%), Gaps = 64/323 (19%)
Query: 422 ALIYLLKLPVELINLKGILVSSTGWATSA-TVDVVYDLLHMMGRDDIPVGLGDVFAV--- 477
AL+YLLKL L+GI +S+ W ++ V+ +YDLL+MMGRDD+ VG+G +
Sbjct: 41 ALLYLLKLNTSQFQLEGISISANAWTSAGHAVNQIYDLLYMMGRDDVAVGVGGEGGILQN 100
Query: 478 GEVNPK---FPPI--------GGCKYAKAIPLGSGGFLDSDTLYGLARD-LPRSPRRYTA 525
G + P + PI GGC+Y +AIP+G GG LD D YG+ + LP+ R+YT
Sbjct: 101 GTILPNVGGYLPIIEQGMTTVGGCRYRRAIPVGLGGRLDIDANYGIRKAFLPQGTRKYTP 160
Query: 526 ENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSS 585
L+QP A +V ++E I G IT+L G TN+A I L N+
Sbjct: 161 ----------------LQQPTAQEV---LIEKISAGP-ITLLVIGAHTNIA--IFLMNNP 198
Query: 586 SV---IQDVYIVGGNKGQDN-------------------EKGNVFT-VPSSKYAEFNMFL 622
+ ++ +YI+GG N E+GN+FT ++ YAEFN+F
Sbjct: 199 HLKKNVEHIYIMGGGVRSSNPTGCCPKNASSTCVPRQCGERGNMFTDYNTNPYAEFNIFG 258
Query: 623 DPLAAKAVFESKLEIKLIPLHMQRRV---ASFFKILHKLRDRKKTPESVFSQRLLQGLMT 679
DP AA V S + I L+PL + FF K +D + S ++ +
Sbjct: 259 DPFAAYQVIHSGIPITLVPLDATNTIPINEQFFDAFEKSQDTYEAQYIFKSLKMARDTWF 318
Query: 680 LQQSHHSYHHVDTFLGEVLGAVI 702
+ + SY D+F + +++
Sbjct: 319 DNEFYSSYFMWDSFAAGIAVSIM 341
>gi|356546466|ref|XP_003541647.1| PREDICTED: uncharacterized protein LOC100819865 [Glycine max]
Length = 881
Score = 1026 bits (2653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/798 (60%), Positives = 635/798 (79%), Gaps = 16/798 (2%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQR--LYV 58
MM +DDI VG+GGEGGILPNGTILP+VGGY II+QGM+T CRYRQAIP+G R L +
Sbjct: 85 MMGQDDITVGMGGEGGILPNGTILPNVGGYLSIIEQGMTTTRGCRYRQAIPMGLRGLLDI 144
Query: 59 NTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHL 118
+TN+G+RKAFLPQG RKY PLRQPTAQQVLI+ IS GPIT+ ++G+HTN AIFLMNNPHL
Sbjct: 145 DTNFGIRKAFLPQGRRKYTPLRQPTAQQVLIDKISTGPITLIMLGAHTNVAIFLMNNPHL 204
Query: 119 KKNIEHIYVMGGAI----RSDCF--NSTNSSQSEQCDSIGNLYPD-DSNPYAEFNIFSDP 171
KKN+EHIY+MGG++ ++ CF ++ S QCD GN+Y + +NPYAE+NIF DP
Sbjct: 205 KKNVEHIYIMGGSVGLRNQTGCFPQDAFTSCVPRQCDGCGNVYTNYKANPYAEYNIFCDP 264
Query: 172 FAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGS 231
FA Y V+HSGIPVT++PLDAT TIP ++ FF EFE+ Q+TYE QYCF+S+KM RD W G+
Sbjct: 265 FATYQVIHSGIPVTLVPLDATNTIPYTKEFFDEFEKSQHTYEVQYCFKSVKMARDAWFGN 324
Query: 232 PPFHEAYCMWDSFMAGVALSIMLNSSSHNGE-NACSEMEYMNLTVVTSNEPYGISDGSNP 290
F++ Y MWDSF GVA+S M NS+ N E N ++MEY+N+TV TSN+PYGISDGSNP
Sbjct: 325 Q-FYKNYFMWDSFATGVAISSMRNSNKRNKEENEFADMEYINITVFTSNKPYGISDGSNP 383
Query: 291 LIDGLEVPKFNVQKNGVHSGHVQTGMQDPFC-LESGKAKCQDGYIKEVKGPEAVRVLVAT 349
DGL+VPKFN++K+GVHSGHVQ G++DPFC +++GK +CQDGY EV GP++++VLVAT
Sbjct: 384 FFDGLKVPKFNLKKDGVHSGHVQQGLRDPFCFVKNGKGRCQDGYTAEVNGPDSMKVLVAT 443
Query: 350 KAKPSQDLGSLLEKEFYLSFLNALNFPQQAGRFNISTQFPYYEEILRKPDFGKKLMGKPV 409
KAKP++++ + L +E++ SFLN L PQ AGRFN +TQFPYY+E+ PDF K +GK V
Sbjct: 444 KAKPNREVRNPLNREYFKSFLNVLRQPQHAGRFNFTTQFPYYKEVTYMPDFQNKTLGKHV 503
Query: 410 VFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIPV 469
VFD+DMS GDFLAL YLLK+ VE+INLK I VS TGWA +AT+DV+YDLLHMMGRDDIPV
Sbjct: 504 VFDMDMSVGDFLALFYLLKVDVEVINLKAITVSPTGWANAATIDVIYDLLHMMGRDDIPV 563
Query: 470 GLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENSV 529
GLGD FA+ + +P FP +G CKY KAIP G+GG LDSDTLYGLARDLPRSPRRYT+ENSV
Sbjct: 564 GLGDAFAMNQSDPIFPIVGDCKYVKAIPHGNGGLLDSDTLYGLARDLPRSPRRYTSENSV 623
Query: 530 RFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQ 589
+FGA ++ D PELRQPL +++W+SI++++E GSKIT+LTNGPLT LA+++ ++N SS I+
Sbjct: 624 KFGAPRNTDHPELRQPLVMEIWESILQTMETGSKITVLTNGPLTTLAKVVSVKNISSRIE 683
Query: 590 DVYIVGGNKGQD-NEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
+VY+VGG+ ++ ++KGN+F+VPS++YAEFNMFLDPLAA+ VF+S + I LIPL +Q +
Sbjct: 684 EVYVVGGHINRNVSDKGNIFSVPSNQYAEFNMFLDPLAAEIVFQSDVNITLIPLSIQHKA 743
Query: 649 ASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILG---G 705
+SF +LH LR +KTPE+VFS+R+L L L+ HH YHH+DTFLGE+LGAV+L G
Sbjct: 744 SSFSSMLHWLRRTEKTPEAVFSKRVLLRLQRLKHIHHRYHHMDTFLGEILGAVVLANGHG 803
Query: 706 NPHLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEVLGDHK 765
+LN +++K +++++ GD S G+++V+++ GKLV++L ++ Y+ FA LGD
Sbjct: 804 PSNLNAKFELKPIKVLAQGDESIDGKMVVDEKHGKLVRILSHMSSKAYHKMFANSLGDWN 863
Query: 766 QSAVIGSFYDQEKTWNTP 783
QSA +GSF DQ + W+ P
Sbjct: 864 QSARVGSFEDQRRKWSHP 881
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 154/344 (44%), Gaps = 64/344 (18%)
Query: 421 LALIYLLKLPVELINLKGILVSSTGWATSA-TVDVVYDLLHMMGRDDIPVGLGDVFAVGE 479
ALIYLLK L+G+ +S+ W + V+ VYD+L+MMG+DDI VG+G +
Sbjct: 44 FALIYLLKHNRSEFQLEGVTISANSWTNAGHAVNQVYDILYMMGQDDITVGMGGEGGILP 103
Query: 480 VNPKFPPIG--------------GCKYAKAIPLGSGGFLDSDTLYGLARD-LPRSPRRYT 524
P +G GC+Y +AIP+G G LD DT +G+ + LP+ R+YT
Sbjct: 104 NGTILPNVGGYLSIIEQGMTTTRGCRYRQAIPMGLRGLLDIDTNFGIRKAFLPQGRRKYT 163
Query: 525 AENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS 584
LRQP A V +++ I G IT++ G TN+A I L N+
Sbjct: 164 P----------------LRQPTAQQV---LIDKISTGP-ITLIMLGAHTNVA--IFLMNN 201
Query: 585 SSV---IQDVYIVGGNKGQDNEK-------------------GNVFT-VPSSKYAEFNMF 621
+ ++ +YI+GG+ G N+ GNV+T ++ YAE+N+F
Sbjct: 202 PHLKKNVEHIYIMGGSVGLRNQTGCFPQDAFTSCVPRQCDGCGNVYTNYKANPYAEYNIF 261
Query: 622 LDPLAAKAVFESKLEIKLIPLHMQRRV---ASFFKILHKLRDRKKTPESVFSQRLLQGLM 678
DP A V S + + L+PL + FF K + + S ++ +
Sbjct: 262 CDPFATYQVIHSGIPVTLVPLDATNTIPYTKEFFDEFEKSQHTYEVQYCFKSVKMARDAW 321
Query: 679 TLQQSHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKSLEIIS 722
Q + +Y D+F V + + N + + +E I+
Sbjct: 322 FGNQFYKNYFMWDSFATGVAISSMRNSNKRNKEENEFADMEYIN 365
>gi|356546464|ref|XP_003541646.1| PREDICTED: uncharacterized protein LOC100819333 [Glycine max]
Length = 876
Score = 1024 bits (2648), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/799 (61%), Positives = 635/799 (79%), Gaps = 18/799 (2%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQR--LYV 58
MM RDDI VG+GGEGGILP+GTILP+VGGY II+QGM+T G CRYRQAIP+G R L +
Sbjct: 76 MMGRDDIAVGMGGEGGILPDGTILPNVGGYLSIIEQGMTTTGGCRYRQAIPIGHRGILDI 135
Query: 59 NTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHL 118
+T YG+RKAFLPQG RKY PL QPTAQQVLI+ ISAGPIT+ V+G TN AIFLMNNPHL
Sbjct: 136 DTIYGIRKAFLPQGIRKYTPLGQPTAQQVLIDKISAGPITLIVIGVQTNIAIFLMNNPHL 195
Query: 119 KKNIEHIYVMGGAIRS----DCF--NSTNSSQSEQCDSIGNLYPD-DSNPYAEFNIFSDP 171
KKN++HIY+MGGA+RS C N++ S QC GN++ + ++NPYAEFNIF DP
Sbjct: 196 KKNVQHIYIMGGAVRSTDPTSCCPKNASFSCIPGQCGDRGNVFTNYEANPYAEFNIFGDP 255
Query: 172 FAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMI---RDTW 228
FAAY V+HSGIPVT++PLDAT TIP++E FF EFE+ Q+TYEAQYCF+SLKM RD
Sbjct: 256 FAAYQVIHSGIPVTLVPLDATNTIPINEEFFNEFEKSQDTYEAQYCFKSLKMAKMARDKL 315
Query: 229 SGSPPFHEAYCMWDSFMAGVALSIMLNSSSHNG-ENACSEMEYMNLTVVTSNEPYGISDG 287
F+ +Y MWDSF +GVA+S M NS+ N EN + MEYMN+TV+TSN+PYGISDG
Sbjct: 316 DNQ--FYTSYFMWDSFASGVAVSSMRNSNKKNKRENEFAHMEYMNITVITSNKPYGISDG 373
Query: 288 SNPLIDGLEVPKFNVQKNGVHSGHVQTGMQDPFC-LESGKAKCQDGYIKEVKGPEAVRVL 346
SNP DGL+VPKFN++K GVHSGHVQ G++D FC +++GK +CQDGY EV GP++V+VL
Sbjct: 374 SNPFFDGLKVPKFNLKKGGVHSGHVQQGLRDKFCFVKNGKGRCQDGYTAEVDGPDSVKVL 433
Query: 347 VATKAKPSQDLGSLLEKEFYLSFLNALNFPQQAGRFNISTQFPYYEEILRKPDFGKKLMG 406
VATKAKP++D+ S L+KE++ SFLN L PQ AGRFN +TQFPYYEE+ PDF K +G
Sbjct: 434 VATKAKPNRDVRSKLDKEYFKSFLNVLKQPQHAGRFNFTTQFPYYEEVTYMPDFQNKTLG 493
Query: 407 KPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDD 466
KPVVFD+DMS GDFLAL YLLK+ VE+INLK I+VS TGWA +AT+DV+YDLLHMMGRDD
Sbjct: 494 KPVVFDMDMSVGDFLALFYLLKVDVEVINLKAIIVSPTGWANAATIDVIYDLLHMMGRDD 553
Query: 467 IPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAE 526
IPVGLGD F + + +P FP G CKY KAIP G+GGFLDSDTLYGLARDLPRSPRRYT E
Sbjct: 554 IPVGLGDFFPMNQSDPIFPTAGNCKYVKAIPHGNGGFLDSDTLYGLARDLPRSPRRYTLE 613
Query: 527 NSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSS 586
NS++F SQ+ D ELRQPLA+++W+SI++++EP SKIT+LTNGPLT LA+++ ++N SS
Sbjct: 614 NSMKFETSQNTDHLELRQPLAMEIWESIMQTLEPESKITVLTNGPLTTLAKVVSMKNISS 673
Query: 587 VIQDVYIVGGNKGQD-NEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQ 645
I++VY++GG+ ++ +KGN+F+VPS++YAEFNMFLDPLAAK VF+S++ I LIPL +Q
Sbjct: 674 RIEEVYVMGGHISRNVCDKGNIFSVPSNQYAEFNMFLDPLAAKTVFQSEVNITLIPLSVQ 733
Query: 646 RRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGG 705
++ +SF +L LR ++TPE+VFS+R+L L L+Q HH YHH+DTFLGE+LGA++L
Sbjct: 734 QKASSFSHMLCWLRRIEQTPETVFSKRVLLRLQRLKQIHHRYHHMDTFLGEILGAIVLAD 793
Query: 706 NP-HLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEVLGDH 764
P L + ++IK ++++++GD S G+++V++E GKLV++L +N Y++ +++ LGD
Sbjct: 794 GPSSLKEKFEIKGIKVLAEGDESIDGEMVVDEEHGKLVRILSHVNAKAYHEKYSKRLGDW 853
Query: 765 KQSAVIGSFYDQEKTWNTP 783
QSA +GSF DQ + W+ P
Sbjct: 854 NQSAKVGSFEDQIRKWSHP 872
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/282 (33%), Positives = 135/282 (47%), Gaps = 64/282 (22%)
Query: 421 LALIYLLKLPVELINLKGILVSSTGWATSA-TVDVVYDLLHMMGRDDIPVGL---GDVFA 476
AL+YLLKL L+G+ +++ W V+ VYD+L+MMGRDDI VG+ G +
Sbjct: 35 FALLYLLKLNRSEFQLEGVTINANAWTNVGHAVNQVYDILYMMGRDDIAVGMGGEGGILP 94
Query: 477 VGEVNPK-----------FPPIGGCKYAKAIPLGSGGFLDSDTLYGLARD-LPRSPRRYT 524
G + P GGC+Y +AIP+G G LD DT+YG+ + LP+ R+YT
Sbjct: 95 DGTILPNVGGYLSIIEQGMTTTGGCRYRQAIPIGHRGILDIDTIYGIRKAFLPQGIRKYT 154
Query: 525 AENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS 584
L QP A V +++ I G IT++ G TN+A I L N+
Sbjct: 155 P----------------LGQPTAQQV---LIDKISAGP-ITLIVIGVQTNIA--IFLMNN 192
Query: 585 SSV---IQDVYIVGGN-------------------KGQDNEKGNVFT-VPSSKYAEFNMF 621
+ +Q +YI+GG GQ ++GNVFT ++ YAEFN+F
Sbjct: 193 PHLKKNVQHIYIMGGAVRSTDPTSCCPKNASFSCIPGQCGDRGNVFTNYEANPYAEFNIF 252
Query: 622 LDPLAAKAVFESKLEIKLIPLHMQRRV---ASFFKILHKLRD 660
DP AA V S + + L+PL + FF K +D
Sbjct: 253 GDPFAAYQVIHSGIPVTLVPLDATNTIPINEEFFNEFEKSQD 294
>gi|90657588|gb|ABD96887.1| hypothetical protein [Cleome spinosa]
Length = 880
Score = 1022 bits (2643), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/801 (62%), Positives = 621/801 (77%), Gaps = 21/801 (2%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIP--VGQRLYV 58
MM RDDI VGVGGEGGIL +G+ILPDVGGY PII+QGM+T G CRYRQAIP +G RL +
Sbjct: 85 MMGRDDIDVGVGGEGGILDDGSILPDVGGYLPIIEQGMTTTGWCRYRQAIPKGLGGRLDI 144
Query: 59 NTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHL 118
+TNYG RK FLPQG R+Y PLRQ T+QQV+ + +S GPITVFV+G+HTN AIFLM+NPHL
Sbjct: 145 DTNYGFRKQFLPQGSRRYTPLRQETSQQVIKDKVSKGPITVFVIGAHTNLAIFLMSNPHL 204
Query: 119 KKNIEHIYVMGGAIRSD----CF--NSTNSSQSEQCDSIGNLYPD-DSNPYAEFNIFSDP 171
K+NI+HIYVMGG +RS C NS +S QC GNL+ D SN YAEFN+F+DP
Sbjct: 205 KRNIQHIYVMGGGVRSRNPTGCCPKNSKDSCTPRQCGDRGNLFTDYTSNRYAEFNMFADP 264
Query: 172 FAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGS 231
FAAY V HSG+PVT++PLDAT TIP+++ FF FE Q TYEAQY F SLK+ RDTW
Sbjct: 265 FAAYQVFHSGVPVTLVPLDATNTIPINKKFFETFETNQRTYEAQYTFLSLKIARDTWFDD 324
Query: 232 PPFHEAYCMWDSFMAGVALSIMLNSSSHNGENACSEMEYMNLTVVTSNEPYGISDGSNPL 291
F+ +Y MWDSF+AGVA+SIM NS NGEN ++MEYMN+TVVTSN+PYG SDGSNP
Sbjct: 325 Q-FYTSYFMWDSFLAGVAVSIMRNSGKDNGENDFAKMEYMNITVVTSNKPYGKSDGSNPF 383
Query: 292 IDGLEVPKFNVQKNGVHSGHVQTGMQDPFCLESGKAKCQDGYIKEVKGPEAVRVLVATKA 351
D VP+FN+ + GVHSGHVQTG++DPFC+ G+ KC DGY KE G ++VRVLVAT+A
Sbjct: 384 FDNRRVPRFNLTRGGVHSGHVQTGLRDPFCVSKGEGKCMDGYTKETSGSDSVRVLVATRA 443
Query: 352 KPSQDLGSLLEKEFYLSFLNALNFPQQAGRFNISTQFPYYEEILRKPDFGKKLMGKPVVF 411
KP++D GS L++EFY+SFL LN P+Q RFN ST+FPYY E L PD KK +GKPVVF
Sbjct: 444 KPNKDTGSKLDREFYVSFLEVLNRPEQTARFNFSTEFPYYREELYIPDLSKKRIGKPVVF 503
Query: 412 DIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIPVGL 471
D+DMS GDFL+L +LLK+PVE+I+LK I+VS TGWA +AT+DVVYDLLHMMGRDDIPVGL
Sbjct: 504 DMDMSPGDFLSLFFLLKVPVEIIDLKAIMVSPTGWANAATIDVVYDLLHMMGRDDIPVGL 563
Query: 472 GDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENSVRF 531
GD+FAV + +P FP +G CKY KA+P GSGGFLDSDTLYGLARDLPRSPRRYTAENSVR+
Sbjct: 564 GDMFAVNQSDPIFPAVGDCKYEKAVPQGSGGFLDSDTLYGLARDLPRSPRRYTAENSVRY 623
Query: 532 GASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQD 590
GA ++ D PELRQPLA++VW+++V+S+ SK+T+LTNGPLT L++++ Q N +S I++
Sbjct: 624 GAPRNTDRPELRQPLALEVWENMVKSMNGESKVTVLTNGPLTTLSKLLSSQKNLTSAIKE 683
Query: 591 VYIVGGNKGQDN-EKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVA 649
VYIVGG+ + N ++GN+FTV S+KY+EFNMFLDPLAAK V ES L I LIPL QR++
Sbjct: 684 VYIVGGHIDRRNTDEGNIFTVHSNKYSEFNMFLDPLAAKNVLESDLNITLIPLGTQRKLN 743
Query: 650 SFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGGN--- 706
SF +L++L KTPES F QRLL L L Q+H+ Y H+D FLGE+LGAV LGG+
Sbjct: 744 SFKTMLNQLFLSTKTPESRFIQRLLGRLYALHQNHYRYQHMDMFLGEILGAVFLGGDATE 803
Query: 707 --PHLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEVLGDH 764
P L Y + +I++GD S+ G++ V++ GK V+VLE+++ Y+ FA LGD
Sbjct: 804 LKPKLGTEY----VRVIAEGDESRDGRVSVDRVHGKRVRVLENVDPRACYEIFASRLGDK 859
Query: 765 KQSAVIGSFYDQEKTWNTPPN 785
KQSAVIGSF +Q+K WNTPP+
Sbjct: 860 KQSAVIGSFEEQKKKWNTPPS 880
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/322 (31%), Positives = 148/322 (45%), Gaps = 62/322 (19%)
Query: 422 ALIYLLKLPVELINLKGILVSSTGWATSA-TVDVVYDLLHMMGRDDIPVGLGDVFAVGEV 480
AL+YLLKL +L+GI +++ W + V+ +YD+L+MMGRDDI VG+G + +
Sbjct: 45 ALLYLLKLNRSEFSLEGITINTNAWTNAGHAVNQIYDVLYMMGRDDIDVGVGGEGGILDD 104
Query: 481 NPKFPPIGG--------------CKYAKAIPLGSGGFLDSDTLYGLARD-LPRSPRRYTA 525
P +GG C+Y +AIP G GG LD DT YG + LP+ RRYT
Sbjct: 105 GSILPDVGGYLPIIEQGMTTTGWCRYRQAIPKGLGGRLDIDTNYGFRKQFLPQGSRRYTP 164
Query: 526 ENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS- 584
LRQ + V K V IT+ G TNLA I + N
Sbjct: 165 ----------------LRQETSQQVIKDKVSK----GPITVFVIGAHTNLA-IFLMSNPH 203
Query: 585 -SSVIQDVYIVGGNKGQDN-------------------EKGNVFT-VPSSKYAEFNMFLD 623
IQ +Y++GG N ++GN+FT S++YAEFNMF D
Sbjct: 204 LKRNIQHIYVMGGGVRSRNPTGCCPKNSKDSCTPRQCGDRGNLFTDYTSNRYAEFNMFAD 263
Query: 624 PLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVF---SQRLLQGLMTL 680
P AA VF S + + L+PL + K ++T E+ + S ++ +
Sbjct: 264 PFAAYQVFHSGVPVTLVPLDATNTIPINKKFFETFETNQRTYEAQYTFLSLKIARDTWFD 323
Query: 681 QQSHHSYHHVDTFLGEVLGAVI 702
Q + SY D+FL V +++
Sbjct: 324 DQFYTSYFMWDSFLAGVAVSIM 345
>gi|449432781|ref|XP_004134177.1| PREDICTED: uncharacterized protein LOC101216049 [Cucumis sativus]
gi|449495414|ref|XP_004159833.1| PREDICTED: uncharacterized LOC101216049 [Cucumis sativus]
Length = 897
Score = 985 bits (2546), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/792 (62%), Positives = 617/792 (77%), Gaps = 13/792 (1%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVG--QRLYV 58
MM+RDD+ VGVGGEGGIL +GTI P+VGGY II+QG++T G CRYRQAIPVG RL
Sbjct: 90 MMDRDDVAVGVGGEGGILEDGTIQPNVGGYLSIIEQGLTTTGGCRYRQAIPVGVGGRLDA 149
Query: 59 NTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHL 118
+TNYGLRKAFLPQG R+Y PL+Q TAQQV+I+ IS GPI +F++GSHTNFAIFLM+NPHL
Sbjct: 150 DTNYGLRKAFLPQGSRRYNPLQQSTAQQVMIDKISEGPINIFLIGSHTNFAIFLMSNPHL 209
Query: 119 KKNIEHIYVMGGAIRSD----CF--NSTNSSQSEQCDSIGNLYPD-DSNPYAEFNIFSDP 171
KKN+EHIY+MGG IRS+ C N++ S QC GNL+ D SNPYAEFNIF DP
Sbjct: 210 KKNVEHIYIMGGGIRSENPTGCCTQNASQSCTPRQCGDPGNLFTDYTSNPYAEFNIFGDP 269
Query: 172 FAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGS 231
FAAY V+HSGIPVTIIPLDAT TIPV++NFF FE+ +T EAQY FQSLK+ RD G
Sbjct: 270 FAAYQVIHSGIPVTIIPLDATDTIPVTKNFFEVFEQNHDTVEAQYIFQSLKIARDYRLGE 329
Query: 232 PPFHEAYCMWDSFMAGVALSIMLNSSSHNGENACSEMEYMNLTVVTSNEPYGISDGSNPL 291
F+ Y MWDSF +GVA SIMLNS +G+N + MEYMN+TVVTSN+PYGISDGSNP
Sbjct: 330 L-FYTNYFMWDSFASGVATSIMLNSHIDDGQNDFALMEYMNITVVTSNKPYGISDGSNPF 388
Query: 292 IDGLEVPKFNVQKNGVHSGHVQTGMQDPFCL-ESGKAKCQDGYIKEVKGPEAVRVLVATK 350
G ++PKF +QK GVHSGH QTG++DPFC+ +GK KCQDGY EV GPE VR LVAT+
Sbjct: 389 FYGRQIPKFGLQKGGVHSGHAQTGLRDPFCIVNNGKGKCQDGYTAEVMGPEGVRTLVATR 448
Query: 351 AKPSQDLGSLLEKEFYLSFLNALNFPQQAGRFNISTQFPYYEEILRKPDFGKKLMGKPVV 410
AKP++++ S L++EFYL FL+ +N P GRFN +TQFP YE+++ PDF +GKPVV
Sbjct: 449 AKPNRNITSPLDREFYLGFLDVINSPINTGRFNFTTQFPDYEQVMYIPDFRNIRLGKPVV 508
Query: 411 FDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIPVG 470
D+DMSAGDFLAL YLLK+PVE+I++K I+ S TGWA +AT+DV+YDLLHMMGRDDIPVG
Sbjct: 509 IDMDMSAGDFLALFYLLKVPVEVIDIKAIIASPTGWANAATIDVIYDLLHMMGRDDIPVG 568
Query: 471 LGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENSVR 530
LGDVFAV + + P +G CKYAKAIP G GG+LDSDTLYGLAR+LPRSPRRYTAE V+
Sbjct: 569 LGDVFAVNQSDSVLPIVGDCKYAKAIPNGCGGYLDSDTLYGLARNLPRSPRRYTAEGPVK 628
Query: 531 FGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQII-GLQNSSSVIQ 589
A Q++ PELRQPLA+++W+SI+ ++EPGSKI++LTNGPLTNLA++I +N+SS+IQ
Sbjct: 629 HEAPQNSQQPELRQPLAMEIWESILTTLEPGSKISVLTNGPLTNLAKLITSNKNASSLIQ 688
Query: 590 DVYIVGGN-KGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
+VYIVGG+ K D +KGNVFTVPS+ YAEFN+FLDPL A+ VFES + + L+PL +QRRV
Sbjct: 689 EVYIVGGHIKDDDTDKGNVFTVPSNIYAEFNIFLDPLGARTVFESTVNVTLVPLGIQRRV 748
Query: 649 ASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGGNPH 708
+SF IL L +KKTPE +F+ RLL L L+QS Y HVDTFLGE+LGAV+L
Sbjct: 749 SSFENILETLHKKKKTPELLFANRLLSRLFRLKQSDICYEHVDTFLGEILGAVVLAEEDL 808
Query: 709 LNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEVLGDHKQSA 768
+ ++ K ++I++DG S+ GQ ++ ++ GKL++VL++LN Y+D FA L D KQSA
Sbjct: 809 VKPVFQFKHVKILADGVESQDGQTVIYEKGGKLIQVLQNLNQTAYFDLFANRLSDTKQSA 868
Query: 769 VIGSFYDQEKTW 780
VI SF DQ++ W
Sbjct: 869 VIKSFNDQKRIW 880
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 144/316 (45%), Gaps = 64/316 (20%)
Query: 436 LKGILVSSTGWATSA-TVDVVYDLLHMMGRDDIPVGLGDVFAV---GEVNPK-------- 483
L+ + +S+ W ++ V+ +YD+L+MM RDD+ VG+G + G + P
Sbjct: 64 LEAVTISTNAWTSAGHAVNQIYDILYMMDRDDVAVGVGGEGGILEDGTIQPNVGGYLSII 123
Query: 484 ---FPPIGGCKYAKAIPLGSGGFLDSDTLYGLARD-LPRSPRRYTAENSVRFGASQDNDD 539
GGC+Y +AIP+G GG LD+DT YGL + LP+ RRY
Sbjct: 124 EQGLTTTGGCRYRQAIPVGVGGRLDADTNYGLRKAFLPQGSRRYNP-------------- 169
Query: 540 PELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS--SSVIQDVYIVGGN 597
L+Q A V +++ I G I I G TN A I + N ++ +YI+GG
Sbjct: 170 --LQQSTAQQV---MIDKISEGP-INIFLIGSHTNFA-IFLMSNPHLKKNVEHIYIMGGG 222
Query: 598 KGQDN-------------------EKGNVFT-VPSSKYAEFNMFLDPLAAKAVFESKLEI 637
+N + GN+FT S+ YAEFN+F DP AA V S + +
Sbjct: 223 IRSENPTGCCTQNASQSCTPRQCGDPGNLFTDYTSNPYAEFNIFGDPFAAYQVIHSGIPV 282
Query: 638 KLIPLHMQRRV---ASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFL 694
+IPL + +FF++ + D + S ++ + + + +Y D+F
Sbjct: 283 TIIPLDATDTIPVTKNFFEVFEQNHDTVEAQYIFQSLKIARDYRLGELFYTNYFMWDSFA 342
Query: 695 GEVLGAVILGGNPHLN 710
V +++L N H++
Sbjct: 343 SGVATSIML--NSHID 356
>gi|15239586|ref|NP_197387.1| inosine-uridine preferring nucleoside hydrolase family protein
[Arabidopsis thaliana]
gi|19310427|gb|AAL84950.1| AT5g18860/F17K4_110 [Arabidopsis thaliana]
gi|22137232|gb|AAM91461.1| AT5g18860/F17K4_110 [Arabidopsis thaliana]
gi|332005239|gb|AED92622.1| inosine-uridine preferring nucleoside hydrolase family protein
[Arabidopsis thaliana]
Length = 890
Score = 977 bits (2526), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/805 (60%), Positives = 618/805 (76%), Gaps = 21/805 (2%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIP--VGQRLYV 58
MM+RDDIPVGVGGEGGI +GTI DVGGY PII+QGM+T GECRYRQAIP +G L +
Sbjct: 87 MMDRDDIPVGVGGEGGISDDGTIHSDVGGYFPIIEQGMTTTGECRYRQAIPKGLGGLLDI 146
Query: 59 NTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHL 118
++NYG RK FLPQG R+Y PL+QPTAQ+V+++ IS GP TV ++GSHTNFA+FLM+NPHL
Sbjct: 147 DSNYGFRKQFLPQGNRRYTPLQQPTAQKVIVDKISEGPTTVILLGSHTNFALFLMSNPHL 206
Query: 119 KKNIEHIYVMGGAIRSD----CF--NST-NSSQSEQCDSIGNLYPD-DSNPYAEFNIFSD 170
K NI+HIY+MGG +RS C NST Q QC + GNL+ D SNPY+EFNIF+D
Sbjct: 207 KHNIQHIYIMGGGVRSQNPTGCCPANSTVAECQPRQCGNRGNLFTDYTSNPYSEFNIFAD 266
Query: 171 PFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERR-QNTYEAQYCFQSLKMIRDTWS 229
PFAAY V HSG+PVT++PLDAT TIP+++ FF FE Q TYEAQY F SLK+ RDTW
Sbjct: 267 PFAAYQVFHSGVPVTLVPLDATNTIPINQKFFETFENNYQRTYEAQYVFLSLKIARDTWF 326
Query: 230 GSPPFHEAYCMWDSFMAGVALSIMLNSSSHN---GENACSEMEYMNLTVVTSNEPYGISD 286
F+++Y MWDSF AGVA+SIM NS++ N GEN +EMEYMN+TVVTSN+PYG SD
Sbjct: 327 DDE-FYKSYFMWDSFTAGVAVSIMRNSANKNNKNGENDFAEMEYMNITVVTSNKPYGRSD 385
Query: 287 GSNPLIDGLEVPKFNVQKNGVHSGHVQTGMQDPFCLES---GKAKCQDGYIKEVKGPEAV 343
GSNP D PKFN+ GVHSGHVQTG++DP CL G+ KC+DGY +E+ G ++V
Sbjct: 386 GSNPFFDNRRTPKFNLALGGVHSGHVQTGLRDPTCLPKSGIGRGKCKDGYTQEISGSDSV 445
Query: 344 RVLVATKAKPSQDLGSLLEKEFYLSFLNALNFPQQAGRFNISTQFPYYEEILRKPDFGKK 403
RVLVAT+AKP+ ++ S L++EFY+ FL LN P++ GRFN S+QFPYY+E L +PD K
Sbjct: 446 RVLVATRAKPNINIKSKLDREFYVDFLEVLNRPEETGRFNFSSQFPYYKEELFRPDLSKT 505
Query: 404 LMGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMG 463
GKPVVFD+DMSAGDFL+L YLLK+PV+ I+LK I+VS TGWA +AT+DVVYDLLHMMG
Sbjct: 506 RPGKPVVFDMDMSAGDFLSLFYLLKVPVDKIDLKAIIVSPTGWANAATIDVVYDLLHMMG 565
Query: 464 RDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRY 523
RDDIPVGLGD+ A+ + +P FPP+GGCKY KAIP G GGFLDSDTLYGLARDLPRSPRRY
Sbjct: 566 RDDIPVGLGDMLALNQSDPIFPPVGGCKYVKAIPRGCGGFLDSDTLYGLARDLPRSPRRY 625
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLA-QIIGLQ 582
TAENSV GA +D D PELRQPLA++VW+++ +S SKIT+LTNGPLTNLA I +
Sbjct: 626 TAENSVTHGAPRDTDRPELRQPLAIEVWQNLTKSGNGVSKITVLTNGPLTNLAKIISSDK 685
Query: 583 NSSSVIQDVYIVGGNKGQD-NEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
SSS+I++VYIVGG+ ++ ++KGN+FT+PS+ YAEFNMFLDPLAAK V ES L I L+P
Sbjct: 686 KSSSLIKEVYIVGGHINREKSDKGNIFTIPSNAYAEFNMFLDPLAAKTVLESALNITLVP 745
Query: 642 LHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAV 701
L Q +++SF +L +L KTPE+ F +RLL L L Q H Y H+D FLGEVLGAV
Sbjct: 746 LATQHKLSSFQTMLDRLYSSTKTPEARFVKRLLVRLQALHQKHRRYTHIDMFLGEVLGAV 805
Query: 702 ILGG-NPHLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEV 760
+LGG + L + + +++I++GD S+ G+I++++ +GK +K+LE +++ + FA
Sbjct: 806 LLGGDDASLKPKMRAEHIKVIAEGDESRDGKILIDKLRGKQIKILERVDLISISESFASR 865
Query: 761 LGDHKQSAVIGSFYDQEKTWNTPPN 785
L D KQSAVIGSF +Q+K W+TPP+
Sbjct: 866 LDDKKQSAVIGSFEEQKKIWSTPPS 890
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 106/324 (32%), Positives = 147/324 (45%), Gaps = 62/324 (19%)
Query: 421 LALIYLLKLPVELINLKGILVSSTGWATSA-TVDVVYDLLHMMGRDDIPVGLG------- 472
A++YLLKL +L GI +S+ W + V+ VYDLLHMM RDDIPVG+G
Sbjct: 46 FAILYLLKLNKSEFDLVGITLSANAWTNAGHAVNQVYDLLHMMDRDDIPVGVGGEGGISD 105
Query: 473 DVFAVGEVNPKFPPI-------GGCKYAKAIPLGSGGFLDSDTLYGLARD-LPRSPRRYT 524
D +V FP I G C+Y +AIP G GG LD D+ YG + LP+ RRYT
Sbjct: 106 DGTIHSDVGGYFPIIEQGMTTTGECRYRQAIPKGLGGLLDIDSNYGFRKQFLPQGNRRYT 165
Query: 525 AENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQ-IIGLQN 583
L+QP A K IV+ I G IL G TN A ++ +
Sbjct: 166 P----------------LQQPTA---QKVIVDKISEGPTTVILL-GSHTNFALFLMSNPH 205
Query: 584 SSSVIQDVYIVGGNKGQDN--------------------EKGNVFT-VPSSKYAEFNMFL 622
IQ +YI+GG N +GN+FT S+ Y+EFN+F
Sbjct: 206 LKHNIQHIYIMGGGVRSQNPTGCCPANSTVAECQPRQCGNRGNLFTDYTSNPYSEFNIFA 265
Query: 623 DPLAAKAVFESKLEIKLIPLHMQRRV---ASFFKILHKLRDRKKTPESVF-SQRLLQGLM 678
DP AA VF S + + L+PL + FF+ R + VF S ++ +
Sbjct: 266 DPFAAYQVFHSGVPVTLVPLDATNTIPINQKFFETFENNYQRTYEAQYVFLSLKIARDTW 325
Query: 679 TLQQSHHSYHHVDTFLGEVLGAVI 702
+ + SY D+F V +++
Sbjct: 326 FDDEFYKSYFMWDSFTAGVAVSIM 349
>gi|297807927|ref|XP_002871847.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297317684|gb|EFH48106.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 891
Score = 972 bits (2512), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/802 (60%), Positives = 614/802 (76%), Gaps = 19/802 (2%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIP--VGQRLYV 58
MM RDDIPVGVGGEGGI +GTI DVGGY PII+QGM+T GECRYRQAIP +G L +
Sbjct: 92 MMGRDDIPVGVGGEGGIRDDGTIHSDVGGYFPIIEQGMTTTGECRYRQAIPKGLGGLLDI 151
Query: 59 NTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHL 118
++NYG RK FLPQG R+Y PLRQPTAQ+V+ + IS GP TV ++GSHTNFA+FLM+NPHL
Sbjct: 152 DSNYGFRKQFLPQGNRRYTPLRQPTAQKVIADKISEGPTTVILIGSHTNFALFLMSNPHL 211
Query: 119 KKNIEHIYVMGGAIRSD----CF--NSTNSS-QSEQCDSIGNLYPD-DSNPYAEFNIFSD 170
K NI+HIY+MGG +RS C NST + Q QC + GNL+ D SNPYAEFNIF+D
Sbjct: 212 KHNIQHIYIMGGGVRSQNPTGCCPANSTAAECQPRQCGNRGNLFTDYTSNPYAEFNIFAD 271
Query: 171 PFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSG 230
PFA+Y V HSG+PVT++PLDAT TIP+++ FF FE+ Q TYEAQY F SLK+ RDTW
Sbjct: 272 PFASYQVFHSGVPVTLVPLDATNTIPINQKFFETFEKNQRTYEAQYVFLSLKIARDTWFD 331
Query: 231 SPPFHEAYCMWDSFMAGVALSIMLNSSSH-NGENACSEMEYMNLTVVTSNEPYGISDGSN 289
F+++Y MWDSF AGVA+SIM NS ++ NGEN +EMEYMN+TVVTSN+PYG SDGSN
Sbjct: 332 DE-FYKSYFMWDSFTAGVAVSIMRNSGNNKNGENDFAEMEYMNITVVTSNKPYGRSDGSN 390
Query: 290 PLIDGLEVPKFNVQKNGVHSGHVQTGMQDPFCLES---GKAKCQDGYIKEVKGPEAVRVL 346
P D PKFN+ GVHSGHVQ G++DP CL G+ KC+DGY +E+ GP++VRVL
Sbjct: 391 PFFDKRRTPKFNLTVGGVHSGHVQMGLRDPACLPKSGKGRGKCKDGYTQEISGPDSVRVL 450
Query: 347 VATKAKPSQDLGSLLEKEFYLSFLNALNFPQQAGRFNISTQFPYYEEILRKPDFGKKLMG 406
VAT+AKP+ ++ S L++EFY+ FL LN P++ GRFN S+QFPYY+E L +PD K +G
Sbjct: 451 VATRAKPNINIKSKLDREFYVDFLEVLNRPEETGRFNFSSQFPYYKEELFRPDLSKTRLG 510
Query: 407 KPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDD 466
KPVVFD+DMSAGDFL+L YLLK+PVE I+LK I+VS TGWA +AT+DVVYDLLHMMGRDD
Sbjct: 511 KPVVFDMDMSAGDFLSLFYLLKVPVEEIDLKAIIVSPTGWANAATIDVVYDLLHMMGRDD 570
Query: 467 IPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAE 526
IPVGLGD+ A+ + +P FPP+G CKY KA+P G GGFLDSDTLYGLARDLPRSPRRYTAE
Sbjct: 571 IPVGLGDMLALNQSDPIFPPVGDCKYVKAVPRGCGGFLDSDTLYGLARDLPRSPRRYTAE 630
Query: 527 NSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLA-QIIGLQNSS 585
NSV GA +D D PELRQPLA++VW+++ +S S IT+LTNGPLT+LA I + SS
Sbjct: 631 NSVADGAPRDTDRPELRQPLALEVWQNLTKSGNGVSNITVLTNGPLTSLAKIISSDKKSS 690
Query: 586 SVIQDVYIVGGN-KGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHM 644
S+I++VYIVGG+ + ++KGN+FTVPS+ YAEFNMFLDPLAAK V ES L I LIPL
Sbjct: 691 SIIKEVYIVGGHINPEKSDKGNIFTVPSNAYAEFNMFLDPLAAKTVLESGLNITLIPLAT 750
Query: 645 QRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILG 704
QR+ SF +L++L KTPE+ F +RLL L L Q H Y H+D FLGE++GAV LG
Sbjct: 751 QRKF-SFQPMLNRLNPSAKTPEARFVRRLLARLQALHQKHRRYTHMDMFLGEIIGAVFLG 809
Query: 705 GN-PHLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEVLGD 763
G+ L + + L++I++GD S G+I++++ +GK +K+LE +++ + + F L D
Sbjct: 810 GDHASLKPKLRAEHLKVIAEGDESIDGKILIDKLRGKQIKILEIVDLRSFSESFTSRLDD 869
Query: 764 HKQSAVIGSFYDQEKTWNTPPN 785
KQSAVIGSF +Q+K W+TPP+
Sbjct: 870 KKQSAVIGSFEEQKKKWSTPPS 891
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 147/323 (45%), Gaps = 61/323 (18%)
Query: 421 LALIYLLKLPVELINLKGILVSSTGWATSA-TVDVVYDLLHMMGRDDIPVGLG------- 472
A++YLLKL +L GI +S+ W + V+ VYDLLHMMGRDDIPVG+G
Sbjct: 51 FAILYLLKLNKSEFDLVGITLSANAWTNAGHAVNQVYDLLHMMGRDDIPVGVGGEGGIRD 110
Query: 473 DVFAVGEVNPKFPPI-------GGCKYAKAIPLGSGGFLDSDTLYGLARD-LPRSPRRYT 524
D +V FP I G C+Y +AIP G GG LD D+ YG + LP+ RRYT
Sbjct: 111 DGTIHSDVGGYFPIIEQGMTTTGECRYRQAIPKGLGGLLDIDSNYGFRKQFLPQGNRRYT 170
Query: 525 AENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQ-IIGLQN 583
LRQP A K I + I G IL G TN A ++ +
Sbjct: 171 P----------------LRQPTA---QKVIADKISEGPTTVILI-GSHTNFALFLMSNPH 210
Query: 584 SSSVIQDVYIVGGNKGQDN--------------------EKGNVFT-VPSSKYAEFNMFL 622
IQ +YI+GG N +GN+FT S+ YAEFN+F
Sbjct: 211 LKHNIQHIYIMGGGVRSQNPTGCCPANSTAAECQPRQCGNRGNLFTDYTSNPYAEFNIFA 270
Query: 623 DPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVF---SQRLLQGLMT 679
DP A+ VF S + + L+PL + K ++T E+ + S ++ +
Sbjct: 271 DPFASYQVFHSGVPVTLVPLDATNTIPINQKFFETFEKNQRTYEAQYVFLSLKIARDTWF 330
Query: 680 LQQSHHSYHHVDTFLGEVLGAVI 702
+ + SY D+F V +++
Sbjct: 331 DDEFYKSYFMWDSFTAGVAVSIM 353
>gi|357478547|ref|XP_003609559.1| Non-specific ribonucleoside hydrolase rihC [Medicago truncatula]
gi|355510614|gb|AES91756.1| Non-specific ribonucleoside hydrolase rihC [Medicago truncatula]
Length = 909
Score = 966 bits (2496), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/806 (58%), Positives = 609/806 (75%), Gaps = 44/806 (5%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVG--QRLYV 58
MM RDDI VGVGGEGGILPNGTILP+VGGY PIIDQGM+T G CRYRQ IP+G RL V
Sbjct: 108 MMGRDDIAVGVGGEGGILPNGTILPNVGGYLPIIDQGMTTTGGCRYRQTIPIGLGGRLDV 167
Query: 59 NTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHL 118
+ NYG+RKAFLPQG RKY PL QPTAQQVLI +SAGP T+F+MG+HTN AIFLMNNPHL
Sbjct: 168 DANYGIRKAFLPQGKRKYTPLEQPTAQQVLIEKVSAGPTTLFMMGAHTNVAIFLMNNPHL 227
Query: 119 KKNIEHIYVMGGAIRSD-----CFNSTNSSQSEQCDSIGNLYPD-DSNPYAEFNIFSDPF 172
KKN+EHIY+MGG +RS C + +S +QC GNL+ D ++NPYAE+NIF DPF
Sbjct: 228 KKNVEHIYIMGGGVRSSNPTGCCPKNASSCVPQQCGDRGNLFTDFNTNPYAEYNIFGDPF 287
Query: 173 AAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSP 232
AAY V+HSG+P+T++P+DA+ TIP+++ FF FE+ Q+TYE QYCF+SLK+ RDTW
Sbjct: 288 AAYQVIHSGLPITLVPIDASNTIPITKEFFEAFEKSQDTYETQYCFKSLKITRDTWFDDE 347
Query: 233 PFHEAYCMWDSFMAGVALSIMLNSSSHNGENACSEMEYMNLTVVTSNEPYGISDGSNPLI 292
F+ +Y MWDSFMAG+A+SIM S++H GEN +EMEYMN+TV+ SN+PYGISDGSNPL
Sbjct: 348 -FYSSYFMWDSFMAGIAVSIMSKSNNHKGENEFAEMEYMNITVIASNKPYGISDGSNPLF 406
Query: 293 DGLEVPKFNVQKNGVHSGHVQTGMQDPFC-LESGKAKCQDGYIKEVKGPEAVRVLVATKA 351
+GL+VPKFN++K GV SGH+Q G++DP+C +++GK KCQDGY KEV+G ++VRVLVATKA
Sbjct: 407 NGLKVPKFNLEKGGVLSGHIQQGLRDPYCFVKNGKGKCQDGYTKEVRGEDSVRVLVATKA 466
Query: 352 KPSQDLGSLLEKEFYLSFLNALNF-------PQQAGRFNISTQFPYYEEILRKPDFGKKL 404
KP+QD+GS L++E++++FLN + QA + Q + IL
Sbjct: 467 KPNQDVGSSLDREYFINFLNVCSLFFGYIFRSSQATTTSREVQLHHTVSIL--------- 517
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
GKPV+FD+DMSAGDFLAL YLLK+PV++I+LK T+D+VYD+LHMMGR
Sbjct: 518 -GKPVLFDMDMSAGDFLALFYLLKVPVQVIDLK----------MQQTIDIVYDILHMMGR 566
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DDIPVGLGDVFA+ + +P P +G CKY KAIP GSGG+LDSDTLYGLAR LPRSPRRYT
Sbjct: 567 DDIPVGLGDVFAMNQEDPILPVVGDCKYVKAIPHGSGGYLDSDTLYGLARHLPRSPRRYT 626
Query: 525 AENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS 584
E SV+FGA +D D ELRQPLA++VW+S++++++PGS IT+LTNGPLTNLA+++ + N
Sbjct: 627 GEKSVKFGAPRDTDHLELRQPLAMEVWESVLQTMKPGSNITVLTNGPLTNLAKVVSMTNI 686
Query: 585 SSVIQDVYIVGGNKGQDNE-KGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLH 643
SS I++VY+VGG+ ++ E KGNVF+VPS++YAEFNMFLDPLAAK VFES++ I LIPL
Sbjct: 687 SSRIKEVYVVGGHISRNTEDKGNVFSVPSNQYAEFNMFLDPLAAKTVFESEVNITLIPLS 746
Query: 644 MQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHV-----DTFLGEVL 698
+QRRV+ F + +L +KTPE FS+RLL L L+Q H YHH+ DTFLGE+L
Sbjct: 747 IQRRVSLFATFIGRLHGTRKTPEVAFSKRLLSSLYHLKQIHDRYHHMHMRLQDTFLGEIL 806
Query: 699 GAVILGGNP-HLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHF 757
GAV+L L +++K +++++ G S G+++V+++ GKLV++L ++ YY+ +
Sbjct: 807 GAVVLAEKASSLKPKFEVKHIKVLASGIESTDGKMVVDEKNGKLVRILSNVEEKAYYNLY 866
Query: 758 AEVLGDHKQSAVIGSFYDQEKTWNTP 783
A LGD QSA +GSF +Q W P
Sbjct: 867 ANKLGDQYQSAKVGSFDEQTTKWRHP 892
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 162/340 (47%), Gaps = 63/340 (18%)
Query: 410 VFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSA-TVDVVYDLLHMMGRDDIP 468
V D D++ D AL+YLLKL L+ + +++ W+++ V+ +YDLL+MMGRDDI
Sbjct: 56 VVDTDVATDDLFALLYLLKLNTSEFQLEAVTINANTWSSAGHVVNQIYDLLYMMGRDDIA 115
Query: 469 VGL---GDVFAVGEVNPK---FPPI--------GGCKYAKAIPLGSGGFLDSDTLYGLAR 514
VG+ G + G + P + PI GGC+Y + IP+G GG LD D YG+ +
Sbjct: 116 VGVGGEGGILPNGTILPNVGGYLPIIDQGMTTTGGCRYRQTIPIGLGGRLDVDANYGIRK 175
Query: 515 D-LPRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLT 573
LP+ R+YT L QP A V ++E + G T+ G T
Sbjct: 176 AFLPQGKRKYTP----------------LEQPTAQQV---LIEKVSAGP-TTLFMMGAHT 215
Query: 574 NLAQIIGLQNSSSV---IQDVYIVGGNKGQDN------------------EKGNVFT-VP 611
N+A I L N+ + ++ +YI+GG N ++GN+FT
Sbjct: 216 NVA--IFLMNNPHLKKNVEHIYIMGGGVRSSNPTGCCPKNASSCVPQQCGDRGNLFTDFN 273
Query: 612 SSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV---ASFFKILHKLRDRKKTPESV 668
++ YAE+N+F DP AA V S L I L+P+ + FF+ K +D +T
Sbjct: 274 TNPYAEYNIFGDPFAAYQVIHSGLPITLVPIDASNTIPITKEFFEAFEKSQDTYETQYCF 333
Query: 669 FSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGGNPH 708
S ++ + + + SY D+F+ + +++ N H
Sbjct: 334 KSLKITRDTWFDDEFYSSYFMWDSFMAGIAVSIMSKSNNH 373
>gi|242087909|ref|XP_002439787.1| hypothetical protein SORBIDRAFT_09g020040 [Sorghum bicolor]
gi|241945072|gb|EES18217.1| hypothetical protein SORBIDRAFT_09g020040 [Sorghum bicolor]
Length = 846
Score = 954 bits (2467), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/796 (58%), Positives = 583/796 (73%), Gaps = 19/796 (2%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPV--GQRLYV 58
MM RDDIPVGVGG+GGI +GTI P+VGGY P+IDQGM+TAG CRYRQAIP+ G RL V
Sbjct: 53 MMGRDDIPVGVGGDGGISYSGTIYPNVGGYLPLIDQGMTTAGGCRYRQAIPLEGGGRLDV 112
Query: 59 NTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHL 118
+TNYG+RK FLPQG R+Y PL+QPTAQ+VLI+ ISAGP TVF++GSHTNFAIFLM PHL
Sbjct: 113 DTNYGIRKDFLPQGHRRYMPLQQPTAQEVLIDTISAGPTTVFLIGSHTNFAIFLMTYPHL 172
Query: 119 KKNIEHIYVMGGAIRSD-----CFNSTNSSQSEQCDSIGNLYPD-DSNPYAEFNIFSDPF 172
K+N+EHIY+MGG +RS C + +QC GN++ +NP AEFNIF DPF
Sbjct: 173 KRNVEHIYIMGGGVRSKKPTGCCPKNATGCTPQQCGDHGNMFTSYSTNPNAEFNIFGDPF 232
Query: 173 AAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSP 232
AAY V HSGIP+T++PLDAT TIP+++ FF EFE RQ TYEAQYCF+SLKM RDTW
Sbjct: 233 AAYQVFHSGIPITLVPLDATNTIPINKEFFYEFEHRQGTYEAQYCFKSLKMARDTWFNDE 292
Query: 233 PFHEAYCMWDSFMAGVALSIMLNSSSHNGENACSEMEYMNLTVVTSNEPYGISDGSNPLI 292
F+ +Y MWDSF +GVA+S M N + N +++EYMN+TVVTSN+PYG+ DGSNPL
Sbjct: 293 -FYTSYFMWDSFTSGVAISSMRNDKNGKYGNDFAQLEYMNITVVTSNKPYGVYDGSNPLF 351
Query: 293 DGLEVPKFNVQKNGVHSGHVQTGMQDPFCLESG--KAKCQDGYIKEVKGPEAVRVLVATK 350
DG PKF +QK GVHSGHVQTG+ D FC G K +C+DGY KEV PEA + VATK
Sbjct: 352 DGHTTPKFGLQKVGVHSGHVQTGITDNFCRVKGSNKGRCEDGYTKEVSSPEAAHIRVATK 411
Query: 351 AKPSQDLGSLLEKEFYLSFLNALNFPQQAGRFNISTQFPYYEEILRKPDFGKKLMGKPVV 410
AKP+ D S L++EF++SFL ALN + +GRF+I QFP+Y E+L KP K G+PV+
Sbjct: 412 AKPNVDKNSPLDREFFVSFLEALNLQENSGRFDIKAQFPFYREVLNKPSLKSKRTGRPVI 471
Query: 411 FDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIPVG 470
D+DMS GDF++LIYLLK P E+I+LKGILVS GWA A++D++YD+LHMMG DDIPVG
Sbjct: 472 IDMDMSPGDFVSLIYLLKAPPEVIDLKGILVSGNGWANVASIDIIYDILHMMGHDDIPVG 531
Query: 471 LGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENSVR 530
G+ A+G P GC+Y IP GSGG +DSDTLYGLAR LPRSPRRYTAENSV+
Sbjct: 532 RGNTTALGT------PSLGCEYVSIIPQGSGGLIDSDTLYGLARSLPRSPRRYTAENSVK 585
Query: 531 FGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQI-IGLQNSSSVIQ 589
+GA ++ D PELRQPLA +VW+SI E ++P KITI+TNGPLTNLA I + +NSSSVI+
Sbjct: 586 YGAPRNTDHPELRQPLAFEVWQSIKEQLDPSEKITIITNGPLTNLANIMLSDRNSSSVIE 645
Query: 590 DVYIVGGN-KGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
VY VGG+ + +++ KGN+FTVPS++YAEFNMFLDPLAAK V ES L+I LIPL QR+
Sbjct: 646 KVYAVGGHIRDENDSKGNLFTVPSNRYAEFNMFLDPLAAKTVLESSLDITLIPLSSQRKA 705
Query: 649 ASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGGNPH 708
ASF +IL L+ TPES F RLL L LQQ H YHH+D FLGE+LGAV L +
Sbjct: 706 ASFQRILQALKHADHTPESSFVHRLLLSLHDLQQKHGLYHHMDIFLGEILGAVYLVEGLN 765
Query: 709 LNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEVLGDHKQSA 768
+ + ++K + I+++ + GQI++N + VKVL N YY A LG ++SA
Sbjct: 766 IKPSLQLKPISIVANNTTNMDGQIVINMQSASSVKVLSDFNTEDYYSRIANSLGHKERSA 825
Query: 769 VIGSFYDQEKTWNTPP 784
VIGSF +Q W+ PP
Sbjct: 826 VIGSFEEQTAIWSRPP 841
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 134/291 (46%), Gaps = 59/291 (20%)
Query: 446 WATSA-TVDVVYDLLHMMGRDDIPVGLGDVFAVGEVNPKFPPI--------------GGC 490
W+ + V+ +YDLL+MMGRDDIPVG+G + +P + GGC
Sbjct: 37 WSDAGHAVNHLYDLLYMMGRDDIPVGVGGDGGISYSGTIYPNVGGYLPLIDQGMTTAGGC 96
Query: 491 KYAKAIPLGSGGFLDSDTLYGLARD-LPRSPRRYTAENSVRFGASQDNDDPELRQPLAVD 549
+Y +AIPL GG LD DT YG+ +D LP+ RRY L+QP A +
Sbjct: 97 RYRQAIPLEGGGRLDVDTNYGIRKDFLPQGHRRYMP----------------LQQPTAQE 140
Query: 550 VWKSIVESIEPGSKITILTNGPLTNLAQ-IIGLQNSSSVIQDVYIVGG------------ 596
V ++++I G T+ G TN A ++ + ++ +YI+GG
Sbjct: 141 V---LIDTISAG-PTTVFLIGSHTNFAIFLMTYPHLKRNVEHIYIMGGGVRSKKPTGCCP 196
Query: 597 ------NKGQDNEKGNVFTVPSSK-YAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVA 649
Q + GN+FT S+ AEFN+F DP AA VF S + I L+PL +
Sbjct: 197 KNATGCTPQQCGDHGNMFTSYSTNPNAEFNIFGDPFAAYQVFHSGIPITLVPLDATNTIP 256
Query: 650 SFFKILHKLRDRKKTPESVF---SQRLLQGLMTLQQSHHSYHHVDTFLGEV 697
+ ++ R+ T E+ + S ++ + + + SY D+F V
Sbjct: 257 INKEFFYEFEHRQGTYEAQYCFKSLKMARDTWFNDEFYTSYFMWDSFTSGV 307
>gi|326526229|dbj|BAJ97131.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 871
Score = 948 bits (2450), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/793 (58%), Positives = 588/793 (74%), Gaps = 20/793 (2%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQ--RLYV 58
MM RDDI VGVGGEGGI +G I P VGGY PIIDQGMST GECRYRQ+IP G RL +
Sbjct: 86 MMGRDDIAVGVGGEGGISNDGRIYPHVGGYFPIIDQGMSTIGECRYRQSIPQGSGGRLDI 145
Query: 59 NTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHL 118
N NYG+R+ LP+G R Y+PL+QPT QQV+I+ ISAGP VF++G+HTNFA+FLM+NPHL
Sbjct: 146 NANYGVRREILPRGNRSYSPLQQPTTQQVMIDTISAGPTNVFLLGTHTNFALFLMSNPHL 205
Query: 119 KKNIEHIYVMGGAIRSD-----CFNSTNSSQSEQCDSIGNLYPD-DSNPYAEFNIFSDPF 172
KKN++HIY+MGG +RS C + S QC GN++ NPYAEFNIF DPF
Sbjct: 206 KKNVKHIYIMGGGVRSQNPTGCCPKNDTSCVPRQCGDHGNMFTTYTKNPYAEFNIFGDPF 265
Query: 173 AAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSP 232
AY V H+GIP+T++PLDAT TIP++E FF FE +Q+TYEAQY FQSLK+ RDTW
Sbjct: 266 GAYQVFHAGIPITLVPLDATNTIPITEPFFKAFEEQQSTYEAQYSFQSLKITRDTWFDDQ 325
Query: 233 PFHEAYCMWDSFMAGVALSIMLNSSSHNGENACSEMEYMNLTVVTSNEPYGISDGSNPLI 292
F+ +Y MWDSFM+GVALSIM N NG+N +EME MN+TVVTSNEPYG+ DGSNP
Sbjct: 326 -FYTSYFMWDSFMSGVALSIMRNGQKLNGDNDFAEMEVMNITVVTSNEPYGVHDGSNPFF 384
Query: 293 DGLEVPKFNVQKNGVHSGHVQTGMQDPFCLESG--KAKCQDGYIKEVKGPEAVRVLVATK 350
DG PKF++ K GVHSGHVQTG D FC+ G K KCQDGY KEV+GP++V VLVA K
Sbjct: 385 DGRPSPKFDLLKGGVHSGHVQTGFNDSFCVLKGSTKGKCQDGYTKEVQGPDSVAVLVAVK 444
Query: 351 AKPSQDLGSLLEKEFYLSFLNALNFPQQAGRFNISTQFPYYEEILRKPDFGKKLMGKPVV 410
AKP++++ S L++EF+ FL LN P+ GRFN + QF +YEEI+ KPD ++ GKPV+
Sbjct: 445 AKPNRNVKSPLDREFFDHFLEVLNQPEHTGRFNFTDQFRHYEEIMYKPDLEHQIRGKPVI 504
Query: 411 FDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIPVG 470
FD+DMS GDFLAL+YLLK P+E I+L+GILVS GWA AT+DV+YD+LHMMGRDDIPVG
Sbjct: 505 FDMDMSPGDFLALLYLLKAPMEAIDLRGILVSGNGWANPATIDVIYDVLHMMGRDDIPVG 564
Query: 471 LGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENSVR 530
LG + A+G P GC+Y KAIP GSGGFLD+DTL+GL R LPRSPRRYTAENSV+
Sbjct: 565 LGKITALGT------PDLGCEYVKAIPHGSGGFLDTDTLFGLDRVLPRSPRRYTAENSVK 618
Query: 531 FGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQII-GLQNSSSVIQ 589
+GA +D PELRQPLA +VW+ I E ++P KITILTNGPLTN+A II + S+I+
Sbjct: 619 YGAPRDTTRPELRQPLAFEVWQHIREELKPTDKITILTNGPLTNIANIILSDTKAESIIE 678
Query: 590 DVYIVGGN-KGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
++IVG + G D ++GNVFTVPS+K++EFN FLDP AAK V ES L+I LIPL QR+V
Sbjct: 679 RIFIVGSHLAGGDGDRGNVFTVPSNKFSEFNFFLDPQAAKTVVESGLDITLIPLRTQRQV 738
Query: 649 ASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGGNPH 708
ASF ++ L +KTPES F+ R+L + LQ+++ +YHH+D FLGE+LGAV L H
Sbjct: 739 ASFEEVTRSLCTAEKTPESSFAYRVLLSMQKLQKNNQAYHHIDMFLGELLGAVFLVQQSH 798
Query: 709 LNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEVLGDHKQSA 768
LN + +++ +S G +S G+ +++Q GK+VKVL+ L+ YY FA++L KQSA
Sbjct: 799 LNHSITERAV-TVSSGHVSIDGETVLHQANGKVVKVLDHLDANAYYTEFAKLLNTKKQSA 857
Query: 769 VIGSFYDQEKTWN 781
V+GSF +Q++ WN
Sbjct: 858 VVGSFDEQKRMWN 870
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 152/341 (44%), Gaps = 60/341 (17%)
Query: 421 LALIYLLKLPVELINLKGILVSSTGWATSA-TVDVVYDLLHMMGRDDIPVGLGDVFAVGE 479
A++YLLK ++K I +S+ W + V+ +YDLL+MMGRDDI VG+G +
Sbjct: 45 FAILYLLKHDRAEFDVKAITISANSWIDAGHAVNQLYDLLYMMGRDDIAVGVGGEGGISN 104
Query: 480 VNPKFPPIGG--------------CKYAKAIPLGSGGFLDSDTLYGLARD-LPRSPRRYT 524
+P +GG C+Y ++IP GSGG LD + YG+ R+ LPR R Y+
Sbjct: 105 DGRIYPHVGGYFPIIDQGMSTIGECRYRQSIPQGSGGRLDINANYGVRREILPRGNRSYS 164
Query: 525 AENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQ-IIGLQN 583
L+QP V ++++I G L G TN A ++ +
Sbjct: 165 P----------------LQQPTTQQV---MIDTISAGPTNVFLL-GTHTNFALFLMSNPH 204
Query: 584 SSSVIQDVYIVGGNKGQDN------------------EKGNVFTVPSSK-YAEFNMFLDP 624
++ +YI+GG N + GN+FT + YAEFN+F DP
Sbjct: 205 LKKNVKHIYIMGGGVRSQNPTGCCPKNDTSCVPRQCGDHGNMFTTYTKNPYAEFNIFGDP 264
Query: 625 LAAKAVFESKLEIKLIPLHMQRRV---ASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQ 681
A VF + + I L+PL + FFK + + + S S ++ +
Sbjct: 265 FGAYQVFHAGIPITLVPLDATNTIPITEPFFKAFEEQQSTYEAQYSFQSLKITRDTWFDD 324
Query: 682 QSHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKSLEIIS 722
Q + SY D+F+ V +++ G LN +E+++
Sbjct: 325 QFYTSYFMWDSFMSGVALSIMRNGQ-KLNGDNDFAEMEVMN 364
>gi|326499684|dbj|BAJ86153.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 871
Score = 947 bits (2449), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/793 (58%), Positives = 588/793 (74%), Gaps = 20/793 (2%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQ--RLYV 58
MM RDDI VGVGGEGGI +G I P VGGY PIIDQGMST GECRYRQ+IP G RL +
Sbjct: 86 MMGRDDIAVGVGGEGGISNDGRIYPHVGGYFPIIDQGMSTIGECRYRQSIPQGSGGRLDI 145
Query: 59 NTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHL 118
N NYG+R+ LP+G R Y+PL+QPT QQV+I+ ISAGP VF++G+HTNFA+FLM+NPHL
Sbjct: 146 NANYGVRREILPRGNRSYSPLQQPTTQQVMIDIISAGPTNVFLLGTHTNFALFLMSNPHL 205
Query: 119 KKNIEHIYVMGGAIRSD-----CFNSTNSSQSEQCDSIGNLYPD-DSNPYAEFNIFSDPF 172
KKN++HIY+MGG +RS C + S QC GN++ NPYAEFNIF DPF
Sbjct: 206 KKNVKHIYIMGGGVRSQNPTGCCPKNDTSCVPRQCGDHGNMFTTYTKNPYAEFNIFGDPF 265
Query: 173 AAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSP 232
AY V H+GIP+T++PLDAT TIP++E FF FE +Q+TYEAQY FQSLK+ RDTW
Sbjct: 266 GAYQVFHAGIPITLVPLDATNTIPITEPFFKAFEEQQSTYEAQYSFQSLKITRDTWFDDQ 325
Query: 233 PFHEAYCMWDSFMAGVALSIMLNSSSHNGENACSEMEYMNLTVVTSNEPYGISDGSNPLI 292
F+ +Y MWDSFM+GVALSIM N NG+N +EME MN+TVVTSNEPYG+ DGSNP
Sbjct: 326 -FYTSYFMWDSFMSGVALSIMRNGQKLNGDNDFAEMEVMNITVVTSNEPYGVHDGSNPFF 384
Query: 293 DGLEVPKFNVQKNGVHSGHVQTGMQDPFCLESG--KAKCQDGYIKEVKGPEAVRVLVATK 350
DG PKF++ K GVHSGHVQTG D FC+ G K KCQDGY KEV+GP++V VLVA K
Sbjct: 385 DGRPSPKFDLLKGGVHSGHVQTGFNDSFCVLKGSTKGKCQDGYTKEVQGPDSVAVLVAVK 444
Query: 351 AKPSQDLGSLLEKEFYLSFLNALNFPQQAGRFNISTQFPYYEEILRKPDFGKKLMGKPVV 410
AKP++++ S L++EF+ FL LN P+ GRFN + QF +YEEI+ KPD ++ GKPV+
Sbjct: 445 AKPNRNVKSPLDREFFDHFLEVLNQPEHTGRFNFTDQFRHYEEIMYKPDLEHQIRGKPVI 504
Query: 411 FDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIPVG 470
FD+DMS GDFLAL+YLLK P+E I+L+GILVS GWA AT+DV+YD+LHMMGRDDIPVG
Sbjct: 505 FDMDMSPGDFLALLYLLKAPMEAIDLRGILVSGNGWANPATIDVIYDVLHMMGRDDIPVG 564
Query: 471 LGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENSVR 530
LG + A+G P GC+Y KAIP GSGGFLD+DTL+GL R LPRSPRRYTAENSV+
Sbjct: 565 LGKITALGT------PDLGCEYVKAIPHGSGGFLDTDTLFGLDRVLPRSPRRYTAENSVK 618
Query: 531 FGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQII-GLQNSSSVIQ 589
+GA +D PELRQPLA +VW+ I E ++P KITILTNGPLTN+A II + S+I+
Sbjct: 619 YGAPRDTTRPELRQPLAFEVWQHIREELKPTDKITILTNGPLTNIANIILSDTKAESIIE 678
Query: 590 DVYIVGGN-KGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
++IVG + G D ++GNVFTVPS+K++EFN FLDP AAK V ES L+I LIPL QR+V
Sbjct: 679 RIFIVGSHLAGGDGDRGNVFTVPSNKFSEFNFFLDPQAAKTVVESGLDITLIPLRTQRQV 738
Query: 649 ASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGGNPH 708
ASF ++ L +KTPES F+ R+L + LQ+++ +YHH+D FLGE+LGAV L H
Sbjct: 739 ASFEEVTRSLCTAEKTPESSFAYRVLLSMQKLQKNNQAYHHIDMFLGELLGAVFLVQQSH 798
Query: 709 LNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEVLGDHKQSA 768
LN + +++ +S G +S G+ +++Q GK+VKVL+ L+ YY FA++L KQSA
Sbjct: 799 LNHSITERAV-TVSSGHVSIDGETVLHQANGKVVKVLDHLDANAYYTEFAKLLNTKKQSA 857
Query: 769 VIGSFYDQEKTWN 781
V+GSF +Q++ WN
Sbjct: 858 VVGSFDEQKRMWN 870
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 149/341 (43%), Gaps = 60/341 (17%)
Query: 421 LALIYLLKLPVELINLKGILVSSTGWATSA-TVDVVYDLLHMMGRDDIPVGLGDVFAVGE 479
A++YLLK ++K I +S+ W + V+ +YDLL+MMGRDDI VG+G +
Sbjct: 45 FAILYLLKHDRAEFDVKAITISANSWIDAGHAVNQLYDLLYMMGRDDIAVGVGGEGGISN 104
Query: 480 VNPKFPPIGG--------------CKYAKAIPLGSGGFLDSDTLYGLARD-LPRSPRRYT 524
+P +GG C+Y ++IP GSGG LD + YG+ R+ LPR R Y+
Sbjct: 105 DGRIYPHVGGYFPIIDQGMSTIGECRYRQSIPQGSGGRLDINANYGVRREILPRGNRSYS 164
Query: 525 AENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQ-IIGLQN 583
L+QP V I+ + + G TN A ++ +
Sbjct: 165 P----------------LQQPTTQQVMIDIISA----GPTNVFLLGTHTNFALFLMSNPH 204
Query: 584 SSSVIQDVYIVGGNKGQDN------------------EKGNVFTVPSSK-YAEFNMFLDP 624
++ +YI+GG N + GN+FT + YAEFN+F DP
Sbjct: 205 LKKNVKHIYIMGGGVRSQNPTGCCPKNDTSCVPRQCGDHGNMFTTYTKNPYAEFNIFGDP 264
Query: 625 LAAKAVFESKLEIKLIPLHMQRRV---ASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQ 681
A VF + + I L+PL + FFK + + + S S ++ +
Sbjct: 265 FGAYQVFHAGIPITLVPLDATNTIPITEPFFKAFEEQQSTYEAQYSFQSLKITRDTWFDD 324
Query: 682 QSHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKSLEIIS 722
Q + SY D+F+ V +++ G LN +E+++
Sbjct: 325 QFYTSYFMWDSFMSGVALSIMRNGQ-KLNGDNDFAEMEVMN 364
>gi|222631555|gb|EEE63687.1| hypothetical protein OsJ_18505 [Oryza sativa Japonica Group]
Length = 896
Score = 930 bits (2404), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/797 (59%), Positives = 584/797 (73%), Gaps = 21/797 (2%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPV--GQRLYV 58
MM RDDIPVGVGG+GGI +GTI P+VGGY P+IDQGM+T G CRYRQAIP+ G RL +
Sbjct: 94 MMGRDDIPVGVGGDGGISGHGTIHPNVGGYLPLIDQGMTTFGPCRYRQAIPLEGGGRLDI 153
Query: 59 NTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHL 118
+TN G+RK FLPQG R+Y PL Q TAQQVLI ISAGP TV ++GSHTNFAIFLM +PHL
Sbjct: 154 DTNSGIRKGFLPQGNRRYIPLHQSTAQQVLIETISAGPTTVMLIGSHTNFAIFLMTHPHL 213
Query: 119 KKNIEHIYVMGGAIRSD----CF--NSTNSSQSEQCDSIGNLYPD-DSNPYAEFNIFSDP 171
KKN+EHIY+MGG +RS+ C NST S +QC GNL+ +NP AEFN+F+DP
Sbjct: 214 KKNVEHIYIMGGGVRSENPTGCCPKNSTTSCTPQQCGDHGNLFTSYRTNPNAEFNMFADP 273
Query: 172 FAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGS 231
FAAY V HSGI +T++PLDAT TIPV+E FF F+++Q+TYEAQYCF SLKM RDTW
Sbjct: 274 FAAYQVFHSGIAITLVPLDATNTIPVNEEFFYAFQQQQSTYEAQYCFDSLKMARDTWFND 333
Query: 232 PPFHEAYCMWDSFMAGVALSIMLNSSSHNGENACSEMEYMNLTVVTSNEPYGISDGSNPL 291
F+ +Y MWDSF +GVALS M N ++ EN +E++YMN+TV+TSN+PYGI DGSNPL
Sbjct: 334 E-FYTSYFMWDSFTSGVALSSMRNDNNCQSENDFAELKYMNITVITSNKPYGIHDGSNPL 392
Query: 292 IDGLEVPKFNVQKNGVHSGHVQTGMQDPFCL--ESGKAKCQDGYIKEVKGPEAVRVLVAT 349
D +PKF +QK GVHSGHVQTG+ D FCL ES K +C+DGY KE GPEAVRV VAT
Sbjct: 393 FDDHVIPKFGLQKGGVHSGHVQTGITDSFCLAKESKKGRCEDGYTKEESGPEAVRVCVAT 452
Query: 350 KAKPSQDLGSLLEKEFYLSFLNALNFPQQAGRFNISTQFPYYEEILRKPDFGKKLMGKPV 409
KAK + D SLL++EF+ SFL LN P+ G FNI+ QFP+Y E+L PDF K GKPV
Sbjct: 453 KAKVNVDKSSLLDREFFKSFLETLNLPENTGLFNITAQFPFYREVLYSPDFTNKSRGKPV 512
Query: 410 VFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIPV 469
+FD+DMS GDF++LIYLLK+P ELI+LKGILVS GWA A++D+VYD+LHMMGRDDIPV
Sbjct: 513 IFDMDMSPGDFISLIYLLKVPTELIDLKGILVSGNGWANVASIDIVYDILHMMGRDDIPV 572
Query: 470 GLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENSV 529
G G A+G + GCKY AIP GSGG LDSDTLYGLAR LPRSPRRYTAENSV
Sbjct: 573 GRGSTSALGTESL------GCKYVSAIPQGSGGLLDSDTLYGLARSLPRSPRRYTAENSV 626
Query: 530 RFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQII-GLQNSSSVI 588
++GA +D D PELRQPLA +VW+ + ++P KITILTNGPLTNLA I+ +N+SSVI
Sbjct: 627 KYGAPRDTDHPELRQPLAFEVWQFVKHQLDPNEKITILTNGPLTNLANIVLSDRNASSVI 686
Query: 589 QDVYIVGGNKGQD-NEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
+ VY+VGG+ D N KGNVF+VPS+ YAEFN+FLDPLAAK V +S L+I LIPL QR+
Sbjct: 687 KSVYVVGGHIRDDSNTKGNVFSVPSNTYAEFNIFLDPLAAKTVLDSTLDITLIPLRAQRK 746
Query: 648 VASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGGNP 707
ASF +L L+ +TPES F LL L LQQ H YHH+D FLGE+LGAV L
Sbjct: 747 AASFHALLEALK-HAETPESRFVHHLLTLLHDLQQKHQLYHHMDMFLGELLGAVSLVEGS 805
Query: 708 HLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEVLGDHKQS 767
++ Q+ + K + I+++ S GQ +V+ + LVKVL N YY A LGD ++S
Sbjct: 806 NIKQSLQRKPISIVANSTTSIDGQTVVDNQSANLVKVLLDFNSEEYYKRVANSLGDKERS 865
Query: 768 AVIGSFYDQEKTWNTPP 784
AVI F +Q W+ PP
Sbjct: 866 AVISGFAEQRAIWSNPP 882
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 131/301 (43%), Gaps = 60/301 (19%)
Query: 437 KGILVSSTGWATSA-TVDVVYDLLHMMGRDDIPVGLGDVFAVGEVNPKFPPIGG------ 489
+ + + W + V+ +YD+L+MMGRDDIPVG+G + P +GG
Sbjct: 69 QAVTIDVNAWTDAGHAVNHLYDMLYMMGRDDIPVGVGGDGGISGHGTIHPNVGGYLPLID 128
Query: 490 --------CKYAKAIPLGSGGFLDSDTLYGLARD-LPRSPRRYTAENSVRFGASQDNDDP 540
C+Y +AIPL GG LD DT G+ + LP+ RRY
Sbjct: 129 QGMTTFGPCRYRQAIPLEGGGRLDIDTNSGIRKGFLPQGNRRYIP--------------- 173
Query: 541 ELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKG 599
L Q A V ++E+I G T++ G TN A + + ++ +YI+GG
Sbjct: 174 -LHQSTAQQV---LIETISAG-PTTVMLIGSHTNFAIFLMTHPHLKKNVEHIYIMGGGVR 228
Query: 600 QDN-------------------EKGNVFT-VPSSKYAEFNMFLDPLAAKAVFESKLEIKL 639
+N + GN+FT ++ AEFNMF DP AA VF S + I L
Sbjct: 229 SENPTGCCPKNSTTSCTPQQCGDHGNLFTSYRTNPNAEFNMFADPFAAYQVFHSGIAITL 288
Query: 640 IPLHMQRRVASFFKILHKLRDRKKTPESVF---SQRLLQGLMTLQQSHHSYHHVDTFLGE 696
+PL + + + + ++ T E+ + S ++ + + + SY D+F
Sbjct: 289 VPLDATNTIPVNEEFFYAFQQQQSTYEAQYCFDSLKMARDTWFNDEFYTSYFMWDSFTSG 348
Query: 697 V 697
V
Sbjct: 349 V 349
>gi|297604490|ref|NP_001055513.2| Os05g0406200 [Oryza sativa Japonica Group]
gi|255676357|dbj|BAF17427.2| Os05g0406200 [Oryza sativa Japonica Group]
Length = 887
Score = 930 bits (2404), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/797 (59%), Positives = 584/797 (73%), Gaps = 21/797 (2%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPV--GQRLYV 58
MM RDDIPVGVGG+GGI +GTI P+VGGY P+IDQGM+T G CRYRQAIP+ G RL +
Sbjct: 94 MMGRDDIPVGVGGDGGISGHGTIHPNVGGYLPLIDQGMTTFGPCRYRQAIPLEGGGRLDI 153
Query: 59 NTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHL 118
+TN G+RK FLPQG R+Y PL Q TAQQVLI ISAGP TV ++GSHTNFAIFLM +PHL
Sbjct: 154 DTNSGIRKGFLPQGNRRYIPLHQSTAQQVLIETISAGPTTVMLIGSHTNFAIFLMTHPHL 213
Query: 119 KKNIEHIYVMGGAIRSD----CF--NSTNSSQSEQCDSIGNLYPD-DSNPYAEFNIFSDP 171
KKN+EHIY+MGG +RS+ C NST S +QC GNL+ +NP AEFN+F+DP
Sbjct: 214 KKNVEHIYIMGGGVRSENPTGCCPKNSTTSCTPQQCGDHGNLFTSYRTNPNAEFNMFADP 273
Query: 172 FAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGS 231
FAAY V HSGI +T++PLDAT TIPV+E FF F+++Q+TYEAQYCF SLKM RDTW
Sbjct: 274 FAAYQVFHSGIAITLVPLDATNTIPVNEEFFYAFQQQQSTYEAQYCFDSLKMARDTWFND 333
Query: 232 PPFHEAYCMWDSFMAGVALSIMLNSSSHNGENACSEMEYMNLTVVTSNEPYGISDGSNPL 291
F+ +Y MWDSF +GVALS M N ++ EN +E++YMN+TV+TSN+PYGI DGSNPL
Sbjct: 334 E-FYTSYFMWDSFTSGVALSSMRNDNNCQSENDFAELKYMNITVITSNKPYGIHDGSNPL 392
Query: 292 IDGLEVPKFNVQKNGVHSGHVQTGMQDPFCL--ESGKAKCQDGYIKEVKGPEAVRVLVAT 349
D +PKF +QK GVHSGHVQTG+ D FCL ES K +C+DGY KE GPEAVRV VAT
Sbjct: 393 FDDHVIPKFGLQKGGVHSGHVQTGITDSFCLAKESKKGRCEDGYTKEESGPEAVRVCVAT 452
Query: 350 KAKPSQDLGSLLEKEFYLSFLNALNFPQQAGRFNISTQFPYYEEILRKPDFGKKLMGKPV 409
KAK + D SLL++EF+ SFL LN P+ G FNI+ QFP+Y E+L PDF K GKPV
Sbjct: 453 KAKVNVDKSSLLDREFFKSFLETLNLPENTGLFNITAQFPFYREVLYSPDFTNKSRGKPV 512
Query: 410 VFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIPV 469
+FD+DMS GDF++LIYLLK+P ELI+LKGILVS GWA A++D+VYD+LHMMGRDDIPV
Sbjct: 513 IFDMDMSPGDFISLIYLLKVPTELIDLKGILVSGNGWANVASIDIVYDILHMMGRDDIPV 572
Query: 470 GLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENSV 529
G G A+G + GCKY AIP GSGG LDSDTLYGLAR LPRSPRRYTAENSV
Sbjct: 573 GRGSTSALGTESL------GCKYVSAIPQGSGGLLDSDTLYGLARSLPRSPRRYTAENSV 626
Query: 530 RFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQII-GLQNSSSVI 588
++GA +D D PELRQPLA +VW+ + ++P KITILTNGPLTNLA I+ +N+SSVI
Sbjct: 627 KYGAPRDTDHPELRQPLAFEVWQFVKHQLDPNEKITILTNGPLTNLANIVLSDRNASSVI 686
Query: 589 QDVYIVGGNKGQD-NEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
+ VY+VGG+ D N KGNVF+VPS+ YAEFN+FLDPLAAK V +S L+I LIPL QR+
Sbjct: 687 KSVYVVGGHIRDDSNTKGNVFSVPSNTYAEFNIFLDPLAAKTVLDSTLDITLIPLRAQRK 746
Query: 648 VASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGGNP 707
ASF +L L+ +TPES F LL L LQQ H YHH+D FLGE+LGAV L
Sbjct: 747 AASFHALLEALK-HAETPESRFVHHLLTLLHDLQQKHQLYHHMDMFLGELLGAVSLVEGS 805
Query: 708 HLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEVLGDHKQS 767
++ Q+ + K + I+++ S GQ +V+ + LVKVL N YY A LGD ++S
Sbjct: 806 NIKQSLQRKPISIVANSTTSIDGQTVVDNQSANLVKVLLDFNSEEYYKRVANSLGDKERS 865
Query: 768 AVIGSFYDQEKTWNTPP 784
AVI F +Q W+ PP
Sbjct: 866 AVISGFAEQRAIWSNPP 882
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 131/301 (43%), Gaps = 60/301 (19%)
Query: 437 KGILVSSTGWATSA-TVDVVYDLLHMMGRDDIPVGLGDVFAVGEVNPKFPPIGG------ 489
+ + + W + V+ +YD+L+MMGRDDIPVG+G + P +GG
Sbjct: 69 QAVTIDVNAWTDAGHAVNHLYDMLYMMGRDDIPVGVGGDGGISGHGTIHPNVGGYLPLID 128
Query: 490 --------CKYAKAIPLGSGGFLDSDTLYGLARD-LPRSPRRYTAENSVRFGASQDNDDP 540
C+Y +AIPL GG LD DT G+ + LP+ RRY
Sbjct: 129 QGMTTFGPCRYRQAIPLEGGGRLDIDTNSGIRKGFLPQGNRRYIP--------------- 173
Query: 541 ELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKG 599
L Q A V ++E+I G T++ G TN A + + ++ +YI+GG
Sbjct: 174 -LHQSTAQQV---LIETISAG-PTTVMLIGSHTNFAIFLMTHPHLKKNVEHIYIMGGGVR 228
Query: 600 QDN-------------------EKGNVFT-VPSSKYAEFNMFLDPLAAKAVFESKLEIKL 639
+N + GN+FT ++ AEFNMF DP AA VF S + I L
Sbjct: 229 SENPTGCCPKNSTTSCTPQQCGDHGNLFTSYRTNPNAEFNMFADPFAAYQVFHSGIAITL 288
Query: 640 IPLHMQRRVASFFKILHKLRDRKKTPESVF---SQRLLQGLMTLQQSHHSYHHVDTFLGE 696
+PL + + + + ++ T E+ + S ++ + + + SY D+F
Sbjct: 289 VPLDATNTIPVNEEFFYAFQQQQSTYEAQYCFDSLKMARDTWFNDEFYTSYFMWDSFTSG 348
Query: 697 V 697
V
Sbjct: 349 V 349
>gi|47777394|gb|AAT38028.1| putative inosine-uridine preferring nucleoside hydrolase [Oryza
sativa Japonica Group]
Length = 909
Score = 930 bits (2403), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/797 (59%), Positives = 584/797 (73%), Gaps = 21/797 (2%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPV--GQRLYV 58
MM RDDIPVGVGG+GGI +GTI P+VGGY P+IDQGM+T G CRYRQAIP+ G RL +
Sbjct: 94 MMGRDDIPVGVGGDGGISGHGTIHPNVGGYLPLIDQGMTTFGPCRYRQAIPLEGGGRLDI 153
Query: 59 NTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHL 118
+TN G+RK FLPQG R+Y PL Q TAQQVLI ISAGP TV ++GSHTNFAIFLM +PHL
Sbjct: 154 DTNSGIRKGFLPQGNRRYIPLHQSTAQQVLIETISAGPTTVMLIGSHTNFAIFLMTHPHL 213
Query: 119 KKNIEHIYVMGGAIRSD----CF--NSTNSSQSEQCDSIGNLYPD-DSNPYAEFNIFSDP 171
KKN+EHIY+MGG +RS+ C NST S +QC GNL+ +NP AEFN+F+DP
Sbjct: 214 KKNVEHIYIMGGGVRSENPTGCCPKNSTTSCTPQQCGDHGNLFTSYRTNPNAEFNMFADP 273
Query: 172 FAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGS 231
FAAY V HSGI +T++PLDAT TIPV+E FF F+++Q+TYEAQYCF SLKM RDTW
Sbjct: 274 FAAYQVFHSGIAITLVPLDATNTIPVNEEFFYAFQQQQSTYEAQYCFDSLKMARDTWFND 333
Query: 232 PPFHEAYCMWDSFMAGVALSIMLNSSSHNGENACSEMEYMNLTVVTSNEPYGISDGSNPL 291
F+ +Y MWDSF +GVALS M N ++ EN +E++YMN+TV+TSN+PYGI DGSNPL
Sbjct: 334 E-FYTSYFMWDSFTSGVALSSMRNDNNCQSENDFAELKYMNITVITSNKPYGIHDGSNPL 392
Query: 292 IDGLEVPKFNVQKNGVHSGHVQTGMQDPFCL--ESGKAKCQDGYIKEVKGPEAVRVLVAT 349
D +PKF +QK GVHSGHVQTG+ D FCL ES K +C+DGY KE GPEAVRV VAT
Sbjct: 393 FDDHVIPKFGLQKGGVHSGHVQTGITDSFCLAKESKKGRCEDGYTKEESGPEAVRVCVAT 452
Query: 350 KAKPSQDLGSLLEKEFYLSFLNALNFPQQAGRFNISTQFPYYEEILRKPDFGKKLMGKPV 409
KAK + D SLL++EF+ SFL LN P+ G FNI+ QFP+Y E+L PDF K GKPV
Sbjct: 453 KAKVNVDKSSLLDREFFKSFLETLNLPENTGLFNITAQFPFYREVLYSPDFTNKSRGKPV 512
Query: 410 VFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIPV 469
+FD+DMS GDF++LIYLLK+P ELI+LKGILVS GWA A++D+VYD+LHMMGRDDIPV
Sbjct: 513 IFDMDMSPGDFISLIYLLKVPTELIDLKGILVSGNGWANVASIDIVYDILHMMGRDDIPV 572
Query: 470 GLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENSV 529
G G A+G + GCKY AIP GSGG LDSDTLYGLAR LPRSPRRYTAENSV
Sbjct: 573 GRGSTSALGTESL------GCKYVSAIPQGSGGLLDSDTLYGLARSLPRSPRRYTAENSV 626
Query: 530 RFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQII-GLQNSSSVI 588
++GA +D D PELRQPLA +VW+ + ++P KITILTNGPLTNLA I+ +N+SSVI
Sbjct: 627 KYGAPRDTDHPELRQPLAFEVWQFVKHQLDPNEKITILTNGPLTNLANIVLSDRNASSVI 686
Query: 589 QDVYIVGGNKGQD-NEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
+ VY+VGG+ D N KGNVF+VPS+ YAEFN+FLDPLAAK V +S L+I LIPL QR+
Sbjct: 687 KSVYVVGGHIRDDSNTKGNVFSVPSNTYAEFNIFLDPLAAKTVLDSTLDITLIPLRAQRK 746
Query: 648 VASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGGNP 707
ASF +L L+ +TPES F LL L LQQ H YHH+D FLGE+LGAV L
Sbjct: 747 AASFHALLEALK-HAETPESRFVHHLLTLLHDLQQKHQLYHHMDMFLGELLGAVSLVEGS 805
Query: 708 HLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEVLGDHKQS 767
++ Q+ + K + I+++ S GQ +V+ + LVKVL N YY A LGD ++S
Sbjct: 806 NIKQSLQRKPISIVANSTTSIDGQTVVDNQSANLVKVLLDFNSEEYYKRVANSLGDKERS 865
Query: 768 AVIGSFYDQEKTWNTPP 784
AVI F +Q W+ PP
Sbjct: 866 AVISGFAEQRAIWSNPP 882
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 131/301 (43%), Gaps = 60/301 (19%)
Query: 437 KGILVSSTGWATSA-TVDVVYDLLHMMGRDDIPVGLGDVFAVGEVNPKFPPIGG------ 489
+ + + W + V+ +YD+L+MMGRDDIPVG+G + P +GG
Sbjct: 69 QAVTIDVNAWTDAGHAVNHLYDMLYMMGRDDIPVGVGGDGGISGHGTIHPNVGGYLPLID 128
Query: 490 --------CKYAKAIPLGSGGFLDSDTLYGLARD-LPRSPRRYTAENSVRFGASQDNDDP 540
C+Y +AIPL GG LD DT G+ + LP+ RRY
Sbjct: 129 QGMTTFGPCRYRQAIPLEGGGRLDIDTNSGIRKGFLPQGNRRYIP--------------- 173
Query: 541 ELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKG 599
L Q A V ++E+I G T++ G TN A + + ++ +YI+GG
Sbjct: 174 -LHQSTAQQV---LIETISAG-PTTVMLIGSHTNFAIFLMTHPHLKKNVEHIYIMGGGVR 228
Query: 600 QDN-------------------EKGNVFT-VPSSKYAEFNMFLDPLAAKAVFESKLEIKL 639
+N + GN+FT ++ AEFNMF DP AA VF S + I L
Sbjct: 229 SENPTGCCPKNSTTSCTPQQCGDHGNLFTSYRTNPNAEFNMFADPFAAYQVFHSGIAITL 288
Query: 640 IPLHMQRRVASFFKILHKLRDRKKTPESVF---SQRLLQGLMTLQQSHHSYHHVDTFLGE 696
+PL + + + + ++ T E+ + S ++ + + + SY D+F
Sbjct: 289 VPLDATNTIPVNEEFFYAFQQQQSTYEAQYCFDSLKMARDTWFNDEFYTSYFMWDSFTSG 348
Query: 697 V 697
V
Sbjct: 349 V 349
>gi|326494332|dbj|BAJ90435.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 774
Score = 925 bits (2391), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/779 (58%), Positives = 576/779 (73%), Gaps = 20/779 (2%)
Query: 15 GGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQ--RLYVNTNYGLRKAFLPQG 72
GGI +G I P VGGY PIIDQGMST GECRYRQ+IP G RL +N NYG+R+ LP+G
Sbjct: 3 GGISNDGRIYPHVGGYFPIIDQGMSTIGECRYRQSIPQGSGGRLDINANYGVRREILPRG 62
Query: 73 GRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAI 132
R Y+PL+QPT QQV+I+ ISAGP VF++G+HTNFA+FLM+NPHLKKN++HIY+MGG +
Sbjct: 63 NRSYSPLQQPTTQQVMIDTISAGPTNVFLLGTHTNFALFLMSNPHLKKNVKHIYIMGGGV 122
Query: 133 RSD-----CFNSTNSSQSEQCDSIGNLYPD-DSNPYAEFNIFSDPFAAYTVLHSGIPVTI 186
RS C + S QC GN++ NPYAEFNIF DPF AY V H+GIP+T+
Sbjct: 123 RSQNPTGCCPKNDTSCVPRQCGDHGNMFTTYTKNPYAEFNIFGDPFGAYQVFHAGIPITL 182
Query: 187 IPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPFHEAYCMWDSFMA 246
+PLDAT TIP++E FF FE +Q+TYEAQY FQSLK+ RDTW F+ +Y MWDSFM+
Sbjct: 183 VPLDATNTIPITEPFFKAFEEQQSTYEAQYSFQSLKITRDTWFDDQ-FYTSYFMWDSFMS 241
Query: 247 GVALSIMLNSSSHNGENACSEMEYMNLTVVTSNEPYGISDGSNPLIDGLEVPKFNVQKNG 306
GVALSIM N NG+N +EME MN+TVVTSNEPYG+ DGSNP DG PKF++ K G
Sbjct: 242 GVALSIMRNGQKLNGDNDFAEMEVMNITVVTSNEPYGVHDGSNPFFDGRPSPKFDLLKGG 301
Query: 307 VHSGHVQTGMQDPFCLESG--KAKCQDGYIKEVKGPEAVRVLVATKAKPSQDLGSLLEKE 364
VHSGHVQTG D FC+ G K KCQDGY KEV+GP++V VLVA KAKP++++ S L++E
Sbjct: 302 VHSGHVQTGFNDSFCVLKGSTKGKCQDGYTKEVQGPDSVAVLVAVKAKPNRNVKSPLDRE 361
Query: 365 FYLSFLNALNFPQQAGRFNISTQFPYYEEILRKPDFGKKLMGKPVVFDIDMSAGDFLALI 424
F+ FL LN P+ GRFN + QF +YEEI+ KPD ++ GKPV+FD+DMS GDFLAL+
Sbjct: 362 FFDHFLEVLNQPEHTGRFNFTDQFRHYEEIMYKPDLEHQIRGKPVIFDMDMSPGDFLALL 421
Query: 425 YLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIPVGLGDVFAVGEVNPKF 484
YLLK P+E I+L+GILVS GWA AT+DV+YD+LHMMGRDDIPVGLG + A+G
Sbjct: 422 YLLKAPMEAIDLRGILVSGNGWANPATIDVIYDVLHMMGRDDIPVGLGKITALGT----- 476
Query: 485 PPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENSVRFGASQDNDDPELRQ 544
P GC+Y KAIP GSGGFLD+DTL+GL R LPRSPRRYTAENSV++GA +D PELRQ
Sbjct: 477 -PDLGCEYVKAIPHGSGGFLDTDTLFGLDRVLPRSPRRYTAENSVKYGAPRDTTRPELRQ 535
Query: 545 PLAVDVWKSIVESIEPGSKITILTNGPLTNLAQII-GLQNSSSVIQDVYIVGGN-KGQDN 602
PLA +VW+ I E ++P KITILTNGPLTN+A II + S+I+ ++IVG + G D
Sbjct: 536 PLAFEVWQHIREELKPTDKITILTNGPLTNIANIILSDTKAESIIERIFIVGSHLAGGDG 595
Query: 603 EKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRK 662
++GNVFTVPS+K++EFN FLDP AAK V ES L+I LIPL QR+VASF ++ L +
Sbjct: 596 DRGNVFTVPSNKFSEFNFFLDPQAAKTVVESGLDITLIPLRTQRQVASFEEVTRSLCTAE 655
Query: 663 KTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKSLEIIS 722
KTPES F+ R+L + LQ+++ +YHH+D FLGE+LGAV L HLN + +++ +S
Sbjct: 656 KTPESSFAYRVLLSMQKLQKNNQAYHHIDMFLGELLGAVFLVQQSHLNHSITERAV-TVS 714
Query: 723 DGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEVLGDHKQSAVIGSFYDQEKTWN 781
G +S G+ +++Q GK+VKVL+ L+ YY FA++L KQSAV+GSF +Q++ WN
Sbjct: 715 SGHVSIDGETVLHQANGKVVKVLDHLDANAYYTEFAKLLNTKKQSAVVGSFDEQKRMWN 773
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 124/281 (44%), Gaps = 59/281 (20%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQRLYVNT 60
MM RDDIPVG+ G I GT PD+G C Y +AIP G +++T
Sbjct: 458 MMGRDDIPVGL---GKITALGT--PDLG---------------CEYVKAIPHGSGGFLDT 497
Query: 61 N--YGLRKAFLPQGGRKY---------AP-------LRQPTA----QQVLINAISAGPIT 98
+ +GL + LP+ R+Y AP LRQP A Q + IT
Sbjct: 498 DTLFGLDRV-LPRSPRRYTAENSVKYGAPRDTTRPELRQPLAFEVWQHIREELKPTDKIT 556
Query: 99 VFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDD 158
+ G TN A ++++ + IE I+++G + + GN++
Sbjct: 557 ILTNGPLTNIANIILSDTKAESIIERIFIVGSHLAGGDGDR------------GNVFTVP 604
Query: 159 SNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCF 218
SN ++EFN F DP AA TV+ SG+ +T+IPL + + E + T E+ + +
Sbjct: 605 SNKFSEFNFFLDPQAAKTVVESGLDITLIPLRTQRQVASFEEVTRSLCTAEKTPESSFAY 664
Query: 219 QSLKMIRDTWSGSPPFHEAYCMWDSFMAGVALSIMLNSSSH 259
+ L ++ + +AY D F+ + ++ L SH
Sbjct: 665 RVLLSMQKLQKNN----QAYHHIDMFLGELLGAVFLVQQSH 701
>gi|242090497|ref|XP_002441081.1| hypothetical protein SORBIDRAFT_09g020000 [Sorghum bicolor]
gi|241946366|gb|EES19511.1| hypothetical protein SORBIDRAFT_09g020000 [Sorghum bicolor]
Length = 827
Score = 894 bits (2309), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/829 (55%), Positives = 579/829 (69%), Gaps = 53/829 (6%)
Query: 2 MNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQ--RLYVN 59
M RDDI VG+GG+GGI +GTI P+V GY P+IDQGM+T G CRYRQAIP G RL +
Sbjct: 1 MGRDDILVGIGGDGGISDSGTIYPNVSGYLPLIDQGMTTVGGCRYRQAIPQGGGGRLDKD 60
Query: 60 TNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHLK 119
TN+GLR+ FLPQG RKY PL+QPTAQQV+I ISAGP TV + GSHTNFAIFLM PHLK
Sbjct: 61 TNFGLRRGFLPQGRRKYTPLQQPTAQQVMIETISAGPTTVILTGSHTNFAIFLMTYPHLK 120
Query: 120 KNIEHIYVMGGAIRSD----CF--NSTNSSQSEQCDSIGNLYPD-DSNPYAEFNIFSDPF 172
KN+EHIY+MGG +RS C N+T +QC GNL+ +NP AEFNIF DPF
Sbjct: 121 KNVEHIYIMGGGVRSKNPTGCCPKNATKFCTPQQCGDHGNLFTCYTTNPNAEFNIFGDPF 180
Query: 173 AAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSP 232
+AY V HSGI +T++PLDAT TIP++E FF EF+R Q+TYEAQYCF++LKM RDTW
Sbjct: 181 SAYQVFHSGISITLVPLDATNTIPINEEFFYEFQRHQSTYEAQYCFKALKMARDTWFNDQ 240
Query: 233 PFHEAYCMWDSFMAGVALSIMLNSSSHNGENACSEMEYMNLTVVTSNEPYGISDGSNPLI 292
F+ +Y MWDSF +GVA+S M N S N +++EYMN+TV+TSN+PYG+ DGSNPL
Sbjct: 241 -FYTSYFMWDSFTSGVAISSMRNDKSGKFGNDFAQLEYMNVTVITSNKPYGVHDGSNPLF 299
Query: 293 DGLEVPKFNVQKNGVHSGHVQTGMQDPFCLESG--KAKCQDGYIKEVKGPEAVRVLVATK 350
G PKF ++++GVHSGHVQTG+ D FC G K +C+DGY KEV GPEAV + VAT+
Sbjct: 300 KGRGAPKFGLKRDGVHSGHVQTGITDNFCSVKGSNKGRCEDGYTKEVSGPEAVHIRVATR 359
Query: 351 AKPSQDLGSLLEKEFYLSFL---------------------------------NALNFPQ 377
AKP+ D S ++EF+ SFL ALN +
Sbjct: 360 AKPNLDKYSPFDREFFKSFLEGYLLYAQLAQLITISTCKPHISRREDFVFGKAKALNLRE 419
Query: 378 QAGRFNISTQFPYYEEILRKPDFGKKLMGKPVVFDIDMSAGDFLALIYLLKLPVELINLK 437
+G N+ QFP+Y EIL K DF K +G PV+FD+DMS GDF++LIYLLK P+E+I+LK
Sbjct: 420 NSGSLNLMAQFPFYREILYKLDFKNKKIGPPVIFDMDMSPGDFISLIYLLKAPIEVIDLK 479
Query: 438 GILVSSTGWATSATVDVVYDLLHMMGRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIP 497
GILVS GWA A++D++YD+LHMMGRDDIPVG G+ A+G PI GC YA IP
Sbjct: 480 GILVSGNGWAHIASIDIIYDILHMMGRDDIPVGRGNTNAIGT------PILGCNYASFIP 533
Query: 498 LGSGGFLDSDTLYGLARDLPRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVES 557
GSGG +DSDTLYGLAR LPRSPRRYTAENSV++GA ++ D PELRQPLA +VW+SI E
Sbjct: 534 QGSGGLIDSDTLYGLARSLPRSPRRYTAENSVKYGAPRNTDHPELRQPLAFEVWQSIKEQ 593
Query: 558 IEPGSKITILTNGPLTNLAQI-IGLQNSSSVIQDVYIVGGN-KGQDNEKGNVFTVPSSKY 615
+ P KITILT+GPLTNLA I + +N+SSVI+ VY+VGG+ +G+++ KGNVFTVPS++Y
Sbjct: 594 LPPSEKITILTSGPLTNLANIMLSDRNTSSVIEKVYVVGGHIRGENDSKGNVFTVPSNRY 653
Query: 616 AEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQ 675
AEFNMFLDPLAAK V ES L+I LIPL QR+VASF ILH L+ TPES F RLL
Sbjct: 654 AEFNMFLDPLAAKTVLESSLDITLIPLRSQRKVASFKSILHALKHTDHTPESSFVHRLLL 713
Query: 676 GLMTLQQSHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKSLEIISDGDISKVGQIIVN 735
L LQQ H YHH+D FLGEVLGAV L + + + ++++ S GQI++N
Sbjct: 714 LLHELQQKHRLYHHMDIFLGEVLGAVYLVEGFSMRPFIQSMPISVVANSSTSTNGQIVIN 773
Query: 736 QEQGKLVKVLESLNVAVYYDHFAEVLGDHKQSAVIGSFYDQEKTWNTPP 784
++ VKVL + YY + LG+ +QSAV+GSF +Q W+ PP
Sbjct: 774 KQSANSVKVLVDFSSGKYYSRVGKSLGNKEQSAVVGSFAEQNTIWSRPP 822
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 125/276 (45%), Gaps = 59/276 (21%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQRLYVNT 60
MM RDDIPVG G I GT PI+ C Y IP G +++
Sbjct: 503 MMGRDDIPVGRGNTNAI---GT---------PILG--------CNYASFIPQGSGGLIDS 542
Query: 61 N--YGLRKAFLPQGGRKY---------AP-------LRQPTAQQVLINAISAGP----IT 98
+ YGL ++ LP+ R+Y AP LRQP A +V + P IT
Sbjct: 543 DTLYGLARS-LPRSPRRYTAENSVKYGAPRNTDHPELRQPLAFEVWQSIKEQLPPSEKIT 601
Query: 99 VFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDD 158
+ G TN A ++++ + IE +YV+GG IR + DS GN++
Sbjct: 602 ILTSGPLTNLANIMLSDRNTSSVIEKVYVVGGHIRG------------ENDSKGNVFTVP 649
Query: 159 SNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCF 218
SN YAEFN+F DP AA TVL S + +T+IPL + + + ++ + +T E+ +
Sbjct: 650 SNRYAEFNMFLDPLAAKTVLESSLDITLIPLRSQRKVASFKSILHALKHTDHTPESSFVH 709
Query: 219 QSLKMIRDTWSGSPPFHEAYCMWDSFMAGVALSIML 254
+ L ++ + H Y D F+ V ++ L
Sbjct: 710 RLLLLLHELQQK----HRLYHHMDIFLGEVLGAVYL 741
>gi|326531474|dbj|BAJ97741.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 865
Score = 880 bits (2275), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/797 (55%), Positives = 560/797 (70%), Gaps = 44/797 (5%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQR---LY 57
MM RDDI VGVGG+GGI G I PDVGGY P+IDQGMSTAG CRYRQAIP G+R L
Sbjct: 91 MMGRDDIAVGVGGDGGISDAGEIRPDVGGYLPLIDQGMSTAGGCRYRQAIPPGRRGGRLD 150
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPH 117
+TN GLR+ FLPQG R YAPLRQPTAQQV+++ +SAGP T+ + G+HTN A+ LM +PH
Sbjct: 151 TDTNGGLRRGFLPQGPRGYAPLRQPTAQQVMVDTVSAGPTTLLLFGTHTNAALLLMTHPH 210
Query: 118 LKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPD-DSNPYAEFNIFSDPFAAYT 176
L++N+E +YV+GG +R GNL+ +NP+AEFN+F DPFAAY
Sbjct: 211 LRRNVERVYVLGGGVRV----------------TGNLFTAYGANPFAEFNVFGDPFAAYQ 254
Query: 177 VLHSGIPVTIIPLDATKTIPVSENFFVEF-ERRQNTYEAQYCFQSL-KMIRDTWSGSPPF 234
VLHSG+P+T++PLDAT TIPV+E FF EF +R Q T EA+YCFQSL +++R +P
Sbjct: 255 VLHSGVPITLVPLDATNTIPVTEEFFGEFGQRWQTTPEARYCFQSLDQVLRRHRRPAPGL 314
Query: 235 H--EAYCMWDSFMAGVALSIMLNSSSHNGENACSEMEYMNLTVVTSNEPYGISDGSNPLI 292
H Y MWDSF AGVA S M N + NG N +E+EYMN+TV+TSN+PYG+ DGSNP
Sbjct: 315 HGSTGYYMWDSFAAGVAFSSMRNGEA-NGANDFTELEYMNITVITSNKPYGVRDGSNPFF 373
Query: 293 DGLEVPKFNVQKNGVHSGHVQTGMQDPFCLESGK--AKCQDGYIKEVKGPEAVRVLVATK 350
DG PKF +++ GVHSGHVQTG++D FCL G +CQDGY KEV G E VRV VAT
Sbjct: 374 DGRATPKFGLEEGGVHSGHVQTGIRDSFCLVPGSNAGRCQDGYTKEVTGFEGVRVRVATS 433
Query: 351 AKPSQDLGSLLEKEFYLSFLNALNFPQQAGRFNISTQFPYYEEILRKPDFGKKLMGKPVV 410
AKP+ D S ++EF SFL LN P+QAGRFNIS QFPYY E+L KPDF KPV+
Sbjct: 434 AKPNTDNNSAFDREFSKSFLEVLNLPKQAGRFNISAQFPYYREVLYKPDFINMSRAKPVI 493
Query: 411 FDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIPVG 470
FD+DMS GDF++LIYLLK P E+I++KG+LV+ GWA A++D+VYD+LHMMGRDDIPVG
Sbjct: 494 FDMDMSPGDFVSLIYLLKAPREVIDVKGVLVNGNGWANIASIDIVYDILHMMGRDDIPVG 553
Query: 471 LGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENSVR 530
LG+ A+G P GC AIP GSGG++DSDTLYGLAR LPRSPR YT E++
Sbjct: 554 LGNTTAMGN------PTLGCNNVYAIPQGSGGYIDSDTLYGLARLLPRSPRSYTPEST-- 605
Query: 531 FGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQI-IGLQNSSSVIQ 589
DDPE RQPLA +VW+S+ + PG KIT+LT+GPLTNLA I + + + SVI+
Sbjct: 606 -------DDPEHRQPLAFEVWQSVRRQLGPGDKITLLTSGPLTNLANISLSDREAISVIE 658
Query: 590 DVYIVGG-NKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
VY+VGG + + +EKGNVFTVPS++YAEFNMFLDPLAAK V ES + I LIPL QR+
Sbjct: 659 RVYVVGGLIRDEGHEKGNVFTVPSNRYAEFNMFLDPLAAKTVLESNMNITLIPLTAQRKA 718
Query: 649 ASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGGNPH 708
SF +L L ++TPES F Q+L L LQ YHHVD FLGEVLGAV + +
Sbjct: 719 NSFGAVLEALEQTRQTPESKFVQQLFSLLKKLQSKEKLYHHVDIFLGEVLGAVYMVQGSN 778
Query: 709 LNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEVLGDHKQSA 768
L T K+K + I+++ S GQ++V+++ KLV VL NV +YY+ A+ L + K SA
Sbjct: 779 LKSTVKLKRISILANTTKSTDGQLVVSKQSTKLVHVLSDFNVGIYYNRLADSLTNKKNSA 838
Query: 769 VIGSFYDQEKTWNTPPN 785
V+ SF +Q+ W+ PPN
Sbjct: 839 VVASFEEQKAIWSRPPN 855
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/283 (33%), Positives = 141/283 (49%), Gaps = 43/283 (15%)
Query: 407 KPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSA-TVDVVYDLLHMMGRD 465
+ ++ D DM D AL+Y+LK ++K I +++ W + V+ +YD+L+MMGRD
Sbjct: 36 RRILVDTDMDTDDLFALLYILKQDRSQFDVKAITINANAWIDAGHGVNQLYDILYMMGRD 95
Query: 466 DIPVGL---GDVFAVGEVNPK----FPPI-------GGCKYAKAIPLG-SGGFLDSDTLY 510
DI VG+ G + GE+ P P I GGC+Y +AIP G GG LD+DT
Sbjct: 96 DIAVGVGGDGGISDAGEIRPDVGGYLPLIDQGMSTAGGCRYRQAIPPGRRGGRLDTDTNG 155
Query: 511 GLARD-LPRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTN 569
GL R LP+ PR Y LRQP A V +V+++ G T+L
Sbjct: 156 GLRRGFLPQGPRGYAP----------------LRQPTAQQV---MVDTVSAG-PTTLLLF 195
Query: 570 GPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEKGNVFTV-PSSKYAEFNMFLDPLAA 627
G TN A ++ + ++ VY++GG GN+FT ++ +AEFN+F DP AA
Sbjct: 196 GTHTNAALLLMTHPHLRRNVERVYVLGGGV---RVTGNLFTAYGANPFAEFNVFGDPFAA 252
Query: 628 KAVFESKLEIKLIPLHMQRRVASFFKILHKLRDR-KKTPESVF 669
V S + I L+PL + + + R + TPE+ +
Sbjct: 253 YQVLHSGVPITLVPLDATNTIPVTEEFFGEFGQRWQTTPEARY 295
>gi|357129197|ref|XP_003566252.1| PREDICTED: uncharacterized protein LOC100844761 [Brachypodium
distachyon]
Length = 850
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/797 (56%), Positives = 563/797 (70%), Gaps = 38/797 (4%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQR---LY 57
MM RDDI VGVGG+GGI G I P+VGGY P+IDQG STAG CRYRQAIP G+R L
Sbjct: 70 MMGRDDIAVGVGGDGGISHAGHIQPNVGGYLPLIDQGASTAGGCRYRQAIPPGRRGGRLD 129
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPH 117
+TN GLR+AFLPQG R+Y+PLRQPTAQQV+ +SAGP T+ + GSHTN A+ L+
Sbjct: 130 ADTNSGLRRAFLPQGPRRYSPLRQPTAQQVMAETLSAGPTTLLLFGSHTNAALLLLTRRR 189
Query: 118 LKK-NIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPD-DSNPYAEFNIFSDPFAAY 175
L + N+E IYV GG +R D + + GNL+ D+NP+AEFN+F DPFAAY
Sbjct: 190 LFRRNVERIYVSGGGVRPDS----------EKNPTGNLFTAYDANPFAEFNVFGDPFAAY 239
Query: 176 TVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSL-KMIRDTWSGSPPF 234
VLHSG+PVT+IPLDAT TIP++E FF EF RRQ TYEAQY F+SL +++R P
Sbjct: 240 QVLHSGVPVTLIPLDATNTIPITEEFFSEFRRRQTTYEAQYSFKSLDQVLRRRRRPGPHL 299
Query: 235 HEAYC--MWDSFMAGVALSIMLNSSSHNGENACSEMEYMNLTVVTSNEPYGISDGSNPLI 292
H + MWDSF AGVALS M N + +G N +E+EYMN+TV+TSN+PYG+ DGSNP
Sbjct: 300 HGSTGDYMWDSFAAGVALSSMRNGEA-DGGNEFAELEYMNITVITSNKPYGVRDGSNPFF 358
Query: 293 DGLEVPKFNVQKNGVHSGHVQTGMQDPFCLESGK--AKCQDGYIKEVKGPEAVRVLVATK 350
DG +VP+F +++ GVHSGHVQTG++D FCL G +C+DGY KEV GPEAVRV VAT
Sbjct: 359 DGHKVPRFGLKEGGVHSGHVQTGIRDSFCLVPGSNSGRCEDGYTKEVSGPEAVRVRVATS 418
Query: 351 AKPSQDLGSLLEKEFYLSFLNALNFPQQAGRFNISTQFPYYEEILRKPDFGKKLMGKPVV 410
AKP+ + S L++EF+ SFL LN P+Q GRFNISTQFPYY E+L KPDF KPV+
Sbjct: 419 AKPNMNKNSTLDREFFKSFLKVLNLPKQNGRFNISTQFPYYREVLYKPDFMNVSRAKPVI 478
Query: 411 FDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIPVG 470
FD+DMS GDF++LIYLLK P ELI+LKGILV+ GWA A++D+VYD+LHMMGRDDI VG
Sbjct: 479 FDMDMSPGDFVSLIYLLKAPRELIDLKGILVNGNGWANIASIDIVYDILHMMGRDDISVG 538
Query: 471 LGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENSVR 530
G+ A+ P GC + AIP GSGGF+DSDTLYGLAR LPRSPRRY+ E+S
Sbjct: 539 RGNTTAMDT------PTLGCNNSYAIPQGSGGFIDSDTLYGLARSLPRSPRRYSPESS-- 590
Query: 531 FGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQI-IGLQNSSSVIQ 589
D P RQPLA +VW+S+ + ++PG+KIT+LT+GPLTNLA I + ++SSVI+
Sbjct: 591 -------DYPVRRQPLAFEVWQSVKKQLDPGAKITVLTSGPLTNLANISLSDADASSVIE 643
Query: 590 DVYIVGG-NKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
VYIVGG + +EKGNVFTVPS++YAEFNMFLDPLAAK V ES L I LIPL QR+
Sbjct: 644 RVYIVGGLIRDGGHEKGNVFTVPSNQYAEFNMFLDPLAAKTVMESNLNITLIPLPAQRKA 703
Query: 649 ASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGGNPH 708
ASF +L L ++TPES F L L LQ YHHVD FLGEVLGAV +
Sbjct: 704 ASFGAVLEALEKTRRTPESTFVHGLFSLLKELQSKQKLYHHVDIFLGEVLGAVYMVQGSD 763
Query: 709 LNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEVLGDHKQSA 768
L + K++ + +I++ S GQI+++++ KLVKVL N +YY+ A L D KQSA
Sbjct: 764 LQSSVKLEPISVIANTTKSTDGQILISKQSTKLVKVLSDFNGKIYYNRLANSLSDKKQSA 823
Query: 769 VIGSFYDQEKTWNTPPN 785
+IGSF +Q+ W+ PPN
Sbjct: 824 IIGSFEEQKAIWSRPPN 840
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/309 (32%), Positives = 155/309 (50%), Gaps = 43/309 (13%)
Query: 407 KPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSA-TVDVVYDLLHMMGRD 465
+ ++ D DM D AL YLLK ++K I +++ W+ + V+ +YD+L+MMGRD
Sbjct: 15 RRILVDTDMDTDDLFALFYLLKQDRSEFDVKAITINANEWSDAGHGVNHLYDILYMMGRD 74
Query: 466 DIPVGL---GDVFAVGEVNPK---FPPI--------GGCKYAKAIPLG-SGGFLDSDTLY 510
DI VG+ G + G + P + P+ GGC+Y +AIP G GG LD+DT
Sbjct: 75 DIAVGVGGDGGISHAGHIQPNVGGYLPLIDQGASTAGGCRYRQAIPPGRRGGRLDADTNS 134
Query: 511 GLARD-LPRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTN 569
GL R LP+ PRRY+ LRQP A V + E++ G T+L
Sbjct: 135 GLRRAFLPQGPRRYSP----------------LRQPTAQQV---MAETLSAG-PTTLLLF 174
Query: 570 GPLTNLAQIIGLQNSSSV--IQDVYIVGGNKGQDNEK---GNVFTV-PSSKYAEFNMFLD 623
G TN A ++ + ++ +Y+ GG D+EK GN+FT ++ +AEFN+F D
Sbjct: 175 GSHTNAALLLLTRRRLFRRNVERIYVSGGGVRPDSEKNPTGNLFTAYDANPFAEFNVFGD 234
Query: 624 PLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQS 683
P AA V S + + LIPL + + + R R+ T E+ +S + L ++ ++
Sbjct: 235 PFAAYQVLHSGVPVTLIPLDATNTIPITEEFFSEFRRRQTTYEAQYSFKSLDQVLRRRRR 294
Query: 684 HHSYHHVDT 692
+ H T
Sbjct: 295 PGPHLHGST 303
>gi|222631554|gb|EEE63686.1| hypothetical protein OsJ_18504 [Oryza sativa Japonica Group]
Length = 828
Score = 827 bits (2136), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/804 (54%), Positives = 559/804 (69%), Gaps = 39/804 (4%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTIL-PDVGGYQPIIDQGMSTAGECRYRQAIPVGQ--RLY 57
MM RDDIPVGVGG+GG+ +G + PDVGGY P+IDQG STAG CRYRQA+P G+ RL
Sbjct: 54 MMGRDDIPVGVGGDGGVSDSGALRGPDVGGYLPLIDQGTSTAGGCRYRQAVPAGRGGRLD 113
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPH 117
V+TN G+R+ FLPQG R+Y P+ QPTAQ+V+ + +S GP TV + G+HTN A+ LM +P
Sbjct: 114 VDTNSGVRRGFLPQGRRRYRPVTQPTAQRVMADTVSGGPTTVLLFGAHTNLALLLMAHPR 173
Query: 118 LKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPD-DSNPYAEFNIFSDPFAAYT 176
L +NI+ +YV GGA+R+ D GNL+ +NP+AEFNIF DPFAAY
Sbjct: 174 LARNIDRVYVSGGAVRA-------------ADPAGNLFTAFATNPFAEFNIFGDPFAAYQ 220
Query: 177 VLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPFH- 235
V+HSGIP+T+IPLDAT TI V+E F EF++ Q TYEAQYCFQSL + G H
Sbjct: 221 VIHSGIPITMIPLDATNTISVTEEFVSEFQQHQQTYEAQYCFQSLDKVLMRLRGRSNGHG 280
Query: 236 -EAYCMWDSFMAGVALSIMLNSSSHNGENACSEMEYMNLTVVTSNEPYGISDGSNPLIDG 294
+Y MWDSF AGVALS M N +GEN SE+EYMN+TV+TSN+PYG DGSNP DG
Sbjct: 281 NTSYYMWDSFAAGVALSSMRNGEV-DGENEFSELEYMNITVITSNKPYGKRDGSNPFFDG 339
Query: 295 LEVPKFNVQKNGVHSGHVQTGMQDPFCLESG--KAKCQDGYIKEVKGPEAVRVLVATKAK 352
PK +++ GVHSGHVQTG++D FCL G + +C+DGY +EV GPE VRV VAT+AK
Sbjct: 340 RATPKLGLKEGGVHSGHVQTGIRDSFCLVPGSNRGRCEDGYTREVSGPEGVRVRVATRAK 399
Query: 353 PSQDLGSLLEKEFYLSFLNALNFPQQAGRFNISTQFPYYEEILRKPDFGKKLMGKPVVFD 412
P+ D S LEKEF SFL LN P+Q G FNI+TQFPYY E+L KP F GKPV+FD
Sbjct: 400 PNTDKNSSLEKEFSKSFLEVLNRPEQTGLFNINTQFPYYREVLYKPVFRNVSRGKPVIFD 459
Query: 413 IDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIPVGLG 472
+DMS GDF++LIYLLK P+E+I+LK +LV+ GWA A++D+VYD+LHMMGRDDIPVGLG
Sbjct: 460 MDMSPGDFVSLIYLLKTPIEVIDLKAVLVNGNGWANIASIDIVYDILHMMGRDDIPVGLG 519
Query: 473 DVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENSVRFG 532
+ A+G P GC + AIP GSGGF+DSDTLYGLAR LPRSPRRY E+
Sbjct: 520 NTTALG------IPTLGCNNSYAIPHGSGGFIDSDTLYGLARSLPRSPRRYAPESL---- 569
Query: 533 ASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQI-IGLQNSSSVIQDV 591
D PE RQPLA++VW+S+ + ++PG KIT+LTNGPLTN+A I + +++SSVI+ V
Sbjct: 570 -----DHPEDRQPLALEVWQSVRKQLDPGEKITVLTNGPLTNMANISLSDRDASSVIERV 624
Query: 592 YIVGG-NKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVAS 650
Y+VGG K +E GN+FTVPS+K+AEFN+FLDPLAAK V ES L+I LIPL QR+ AS
Sbjct: 625 YVVGGLIKDGGDENGNLFTVPSNKHAEFNIFLDPLAAKTVLESDLKIALIPLTAQRKAAS 684
Query: 651 FFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGGNPHLN 710
F +L L D + T ES F LL L LQ YHH+D FLGE+LGAV + L
Sbjct: 685 FRAVLAALEDIQHTHESKFVHELLSLLQELQIKQKLYHHLDIFLGEILGAVYMVEGSGLK 744
Query: 711 QTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEVLGDHKQSAVI 770
+ ++K + +I++ + S GQI++++ KLV+VL + +Y A L + +QSAVI
Sbjct: 745 PSVELKPVSVIANTNKSTDGQIVISKNSAKLVRVLSDFDGEIYSKQLANSLANKRQSAVI 804
Query: 771 GSFYDQEKTWNTPPNGIDRLHQAK 794
GSF +Q+ W+ P N + + K
Sbjct: 805 GSFEEQKAIWSRPVNSSGNIKKQK 828
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 137/289 (47%), Gaps = 45/289 (15%)
Query: 434 INLKGILVSSTGWATSA-TVDVVYDLLHMMGRDDIPVGLGDVFAVG--------EVNPKF 484
I + I +++ W+ + V+ +YDLLHMMGRDDIPVG+G V +V
Sbjct: 26 IVARAITINANEWSDAGHAVNHLYDLLHMMGRDDIPVGVGGDGGVSDSGALRGPDVGGYL 85
Query: 485 PPI-------GGCKYAKAIPLGSGGFLDSDTLYGLARD-LPRSPRRYTAENSVRFGASQD 536
P I GGC+Y +A+P G GG LD DT G+ R LP+ RRY
Sbjct: 86 PLIDQGTSTAGGCRYRQAVPAGRGGRLDVDTNSGVRRGFLPQGRRRYRP----------- 134
Query: 537 NDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVG 595
+ QP A V V G T+L G TNLA ++ + I VY+ G
Sbjct: 135 -----VTQPTAQRVMADTVS----GGPTTVLLFGAHTNLALLLMAHPRLARNIDRVYVSG 185
Query: 596 GNKGQDNEKGNVFTV-PSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKI 654
G + GN+FT ++ +AEFN+F DP AA V S + I +IPL ++ +
Sbjct: 186 GAVRAADPAGNLFTAFATNPFAEFNIFGDPFAAYQVIHSGIPITMIPLDATNTISVTEEF 245
Query: 655 LHKLRDRKKTPESVFS-QRLLQGLMTLQ-----QSHHSYHHVDTFLGEV 697
+ + + ++T E+ + Q L + LM L+ + SY+ D+F V
Sbjct: 246 VSEFQQHQQTYEAQYCFQSLDKVLMRLRGRSNGHGNTSYYMWDSFAAGV 294
>gi|218196782|gb|EEC79209.1| hypothetical protein OsI_19926 [Oryza sativa Indica Group]
Length = 870
Score = 823 bits (2127), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/804 (54%), Positives = 558/804 (69%), Gaps = 39/804 (4%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTI-LPDVGGYQPIIDQGMSTAGECRYRQAIPVGQ--RLY 57
MM RDDIPVGVGG+GG+ +G + PDVGGY P+IDQG STAG CRYRQA+P G+ RL
Sbjct: 96 MMGRDDIPVGVGGDGGVSDSGALRAPDVGGYLPLIDQGTSTAGGCRYRQAVPAGRGGRLD 155
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPH 117
V+TN G+R+ FLPQG R+Y P+ QPTAQ+V+ + +S GP TV + G+HTN A+ LM +P
Sbjct: 156 VDTNSGVRRGFLPQGRRRYRPVTQPTAQRVMADTVSGGPTTVLLFGAHTNLALLLMAHPR 215
Query: 118 LKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPD-DSNPYAEFNIFSDPFAAYT 176
L +NI+ +YV GGA+R+ D GNL+ +NP+AEFNIF DPFAAY
Sbjct: 216 LARNIDRVYVSGGAVRA-------------ADPAGNLFTAFATNPFAEFNIFGDPFAAYQ 262
Query: 177 VLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPFH- 235
V+HSGIP+T+IPLDAT TI V+E F EF++ Q TYEAQYCFQSL + G H
Sbjct: 263 VIHSGIPITMIPLDATNTISVTEEFVSEFQQHQQTYEAQYCFQSLDKVLMRLRGRSNGHG 322
Query: 236 -EAYCMWDSFMAGVALSIMLNSSSHNGENACSEMEYMNLTVVTSNEPYGISDGSNPLIDG 294
+Y MWDSF AGVALS M N +GEN SE+EYMN+TV+TSN+PYG DGSNP DG
Sbjct: 323 NTSYYMWDSFAAGVALSSMRNGEV-DGENEFSELEYMNITVITSNKPYGKRDGSNPFFDG 381
Query: 295 LEVPKFNVQKNGVHSGHVQTGMQDPFCLESG--KAKCQDGYIKEVKGPEAVRVLVATKAK 352
PK +++ GVHSGHVQTG++D FCL G + +C+DGY +EV GPE V V VAT+AK
Sbjct: 382 RATPKLGLKEGGVHSGHVQTGIRDSFCLVPGSNRGRCEDGYTREVSGPEGVWVRVATRAK 441
Query: 353 PSQDLGSLLEKEFYLSFLNALNFPQQAGRFNISTQFPYYEEILRKPDFGKKLMGKPVVFD 412
P+ D S LEKEF SFL LN P+Q G FNI+TQFPYY E+L KP F GKPV+FD
Sbjct: 442 PNTDKNSSLEKEFSKSFLEVLNRPEQTGLFNINTQFPYYREVLYKPVFRNVSRGKPVIFD 501
Query: 413 IDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIPVGLG 472
+DMS GDF++LIYLLK P+E+I+LK +LV+ GWA A++D+VYD+LHMMGRDDIPVGLG
Sbjct: 502 MDMSPGDFVSLIYLLKTPIEVIDLKAVLVNGNGWANIASIDIVYDILHMMGRDDIPVGLG 561
Query: 473 DVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENSVRFG 532
+ A+G P GC + AIP GSGGF+DSDTLYGLAR LPRSPRRY E+
Sbjct: 562 NTTALG------IPTLGCNNSYAIPHGSGGFIDSDTLYGLARSLPRSPRRYAPESL---- 611
Query: 533 ASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQI-IGLQNSSSVIQDV 591
D PE RQPLA++VW+S+ + ++PG KIT+LTNGPLTN+A I + +++SSVI+ V
Sbjct: 612 -----DHPEDRQPLALEVWQSVRKQLDPGEKITVLTNGPLTNMANISLSDRDASSVIERV 666
Query: 592 YIVGG-NKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVAS 650
Y+VGG K +E GN+FTVPS+K+AEFN+FLDPLAAK V ES L+I LIPL QR+ AS
Sbjct: 667 YVVGGLIKDGGDENGNLFTVPSNKHAEFNIFLDPLAAKTVLESDLKIALIPLTAQRKAAS 726
Query: 651 FFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGGNPHLN 710
F +L L D + T ES F LL L LQ YHH+D FLGE+LGAV + L
Sbjct: 727 FRAVLAALEDIQHTHESKFVHELLSLLQELQIKQKLYHHLDIFLGEILGAVYMVEGSGLK 786
Query: 711 QTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEVLGDHKQSAVI 770
+ ++K + +I++ + S GQI++++ KLV+VL + +Y A L + +QSAVI
Sbjct: 787 PSVELKPVSVIANTNKSTDGQIVISKNSAKLVRVLSDFDGEIYSKQLANSLANKRQSAVI 846
Query: 771 GSFYDQEKTWNTPPNGIDRLHQAK 794
GSF +Q+ W+ P N + + K
Sbjct: 847 GSFEEQKAIWSRPVNSSGNIKKQK 870
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 148/316 (46%), Gaps = 45/316 (14%)
Query: 407 KPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSA-TVDVVYDLLHMMGRD 465
+ ++ D DM D AL+YLLK ++K I +++ W+ + V+ +YDLLHMMGRD
Sbjct: 41 RRILVDTDMDTDDLFALLYLLKQNRSEFDVKAITINANEWSDAGHAVNHLYDLLHMMGRD 100
Query: 466 DIP--------VGLGDVFAVGEVNPKFPPI-------GGCKYAKAIPLGSGGFLDSDTLY 510
DIP V +V P I GGC+Y +A+P G GG LD DT
Sbjct: 101 DIPVGVGGDGGVSDSGALRAPDVGGYLPLIDQGTSTAGGCRYRQAVPAGRGGRLDVDTNS 160
Query: 511 GLARD-LPRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTN 569
G+ R LP+ RRY + QP A V V G T+L
Sbjct: 161 GVRRGFLPQGRRRYRP----------------VTQPTAQRVMADTVS----GGPTTVLLF 200
Query: 570 GPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEKGNVFTV-PSSKYAEFNMFLDPLAA 627
G TNLA ++ + I VY+ GG + GN+FT ++ +AEFN+F DP AA
Sbjct: 201 GAHTNLALLLMAHPRLARNIDRVYVSGGAVRAADPAGNLFTAFATNPFAEFNIFGDPFAA 260
Query: 628 KAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFS-QRLLQGLMTLQ----- 681
V S + I +IPL ++ + + + + ++T E+ + Q L + LM L+
Sbjct: 261 YQVIHSGIPITMIPLDATNTISVTEEFVSEFQQHQQTYEAQYCFQSLDKVLMRLRGRSNG 320
Query: 682 QSHHSYHHVDTFLGEV 697
+ SY+ D+F V
Sbjct: 321 HGNTSYYMWDSFAAGV 336
>gi|242090495|ref|XP_002441080.1| hypothetical protein SORBIDRAFT_09g019990 [Sorghum bicolor]
gi|241946365|gb|EES19510.1| hypothetical protein SORBIDRAFT_09g019990 [Sorghum bicolor]
Length = 821
Score = 808 bits (2088), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/790 (53%), Positives = 533/790 (67%), Gaps = 80/790 (10%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQRLYVNT 60
MM RDDIPVGVGG+GGI G + +VGGY P+IDQGMSTAG CRYRQAIP+ RL V+T
Sbjct: 92 MMGRDDIPVGVGGDGGISDAGDLQRNVGGYLPLIDQGMSTAGGCRYRQAIPLSGRLDVDT 151
Query: 61 NYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKK 120
N+G+RK +LPQG R Y PLRQPTAQ+V+ +SAGP +V ++G+HTN A+ LM+ P+L++
Sbjct: 152 NFGVRKGYLPQGSRGYRPLRQPTAQRVMAATLSAGPTSVLLLGTHTNLALLLMSRPNLRR 211
Query: 121 NIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY-PDDSNPYAEFNIFSDPFAAYTVLH 179
N+E +YV GG +R GNL+ +NP AEFN+F DPFAAY VLH
Sbjct: 212 NVERVYVSGGGVR----------------VAGNLFTATAANPVAEFNVFGDPFAAYQVLH 255
Query: 180 SGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPFHEAYC 239
SG+PVT+IPLDAT TIP++E F+ EF+RRQ+T+EA+YCF SL +
Sbjct: 256 SGVPVTMIPLDATNTIPITEAFYSEFQRRQSTHEARYCFLSLD-------------GGFY 302
Query: 240 MWDSFMAGVALSIMLNSSSHNGENACSEMEYMNLTVVTSNEPYGISDGSNPLIDGLEVPK 299
MWD F AGV L+ M + + + N +E+EYMN+TVVTSN+PYG+ DGSNP DG PK
Sbjct: 303 MWDQFAAGVTLASMRHGETGSRSNEFAELEYMNITVVTSNKPYGVRDGSNPFFDGRTAPK 362
Query: 300 FNVQKNGVHSGHVQTGMQDPFCLESG--KAKCQDGYIKEVKGPEAVRVLVATKAKPSQDL 357
F +Q+ GVHSGHV+TG++DPFCL G + +C+DGY KEV G EAV+V
Sbjct: 363 FGLQEGGVHSGHVETGIRDPFCLVPGSNRGRCKDGYTKEVSGLEAVQV------------ 410
Query: 358 GSLLEKEFYLSFLNALNFPQQAGRFNISTQFPYYEEILRKPDFGKKLMGKPVVFDIDMSA 417
LN Q GRF+ISTQFPYY E+L KPDF GKPVVFD+DMS
Sbjct: 411 ---------------LNLQQNTGRFDISTQFPYYREVLYKPDFMNVTRGKPVVFDMDMSP 455
Query: 418 GDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIPVGLGDVFAV 477
GDF++LIYLLK P I+LK +L++ GWA SA++D+VYD+LHMMGRDDIPVGLG+ A+
Sbjct: 456 GDFVSLIYLLKEPRHEIDLKAVLINGNGWANSASIDIVYDVLHMMGRDDIPVGLGNTTAM 515
Query: 478 GEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENSVRFGASQDN 537
G P GC + AIP GSGGF+DSDTLYGLAR LPRSPRR+T S D
Sbjct: 516 GS------PTLGCNNSYAIPHGSGGFVDSDTLYGLARSLPRSPRRFT---------SDDL 560
Query: 538 DDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQI-IGLQNSSSVIQDVYIVGG 596
D PE R P A DVW+S+ + + PG KIT+LT+GPLTNLA I + ++SSVI+ VY+VGG
Sbjct: 561 DHPESRHPHAFDVWQSVRKQLSPGQKITVLTSGPLTNLASISLSDMDASSVIERVYVVGG 620
Query: 597 --NKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKI 654
G D EKGNVFTVPS++YAEFNMFLDPLAAK V ES L I LIPL +QR+VASF I
Sbjct: 621 LIRDGGD-EKGNVFTVPSNRYAEFNMFLDPLAAKTVLESSLNITLIPLTVQRKVASFEGI 679
Query: 655 LHKLRDRKK-TPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGGNPHLNQTY 713
L L+ + TPES RLL L LQ+ YHH+D FLGEVLGAV + L +
Sbjct: 680 LGALKQHTQHTPESKLVHRLLLLLQKLQRKQKFYHHMDIFLGEVLGAVYMVQGTDLEPSV 739
Query: 714 KIKSLEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEVLGDHKQSAVIGSF 773
K+KS+ I+++ GQI+V ++ K V VL SLN Y++H A L + KQSAV+GSF
Sbjct: 740 KVKSISIVANTTERTNGQILV-KKSAKPVNVLYSLNTGAYHNHLANSLANDKQSAVVGSF 798
Query: 774 YDQEKTWNTP 783
+Q+ W+ P
Sbjct: 799 EEQKAIWSRP 808
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 128/273 (46%), Gaps = 43/273 (15%)
Query: 422 ALIYLLKLPVELINLKGILVSSTGWATSA-TVDVVYDLLHMMGRDDIPVGLGDVFAVGE- 479
AL+Y+LK ++K I +S+ W + V+ +YD+L+MMGRDDIPVG+G + +
Sbjct: 52 ALLYILKQNRSEFDVKAITISANAWTDAGHAVNHLYDILYMMGRDDIPVGVGGDGGISDA 111
Query: 480 -------------VNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARD-LPRSPRRYTA 525
++ GGC+Y +AIPL G LD DT +G+ + LP+ R Y
Sbjct: 112 GDLQRNVGGYLPLIDQGMSTAGGCRYRQAIPL--SGRLDVDTNFGVRKGYLPQGSRGYR- 168
Query: 526 ENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ-NS 584
LRQP A V + + + ++L G TNLA ++ + N
Sbjct: 169 ---------------PLRQPTAQRVMAATLSA----GPTSVLLLGTHTNLALLLMSRPNL 209
Query: 585 SSVIQDVYIVGGNKGQDNEKGNVFTVPSSK-YAEFNMFLDPLAAKAVFESKLEIKLIPLH 643
++ VY+ GG GN+FT ++ AEFN+F DP AA V S + + +IPL
Sbjct: 210 RRNVERVYVSGGGV---RVAGNLFTATAANPVAEFNVFGDPFAAYQVLHSGVPVTMIPLD 266
Query: 644 MQRRVASFFKILHKLRDRKKTPESVFSQRLLQG 676
+ + + R+ T E+ + L G
Sbjct: 267 ATNTIPITEAFYSEFQRRQSTHEARYCFLSLDG 299
>gi|115463825|ref|NP_001055512.1| Os05g0406100 [Oryza sativa Japonica Group]
gi|113579063|dbj|BAF17426.1| Os05g0406100 [Oryza sativa Japonica Group]
Length = 746
Score = 803 bits (2073), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/768 (53%), Positives = 530/768 (69%), Gaps = 38/768 (4%)
Query: 36 QGMSTAGECRYRQAIPVGQ--RLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAIS 93
QG STAG CRYRQA+P G+ RL V+TN G+R+ FLPQG R+Y P+ QPTAQ+V+ + +S
Sbjct: 8 QGTSTAGGCRYRQAVPAGRGGRLDVDTNSGVRRGFLPQGRRRYRPVTQPTAQRVMADTVS 67
Query: 94 AGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGN 153
GP TV + G+HTN A+ LM +P L +NI+ +YV GGA+R+ D GN
Sbjct: 68 GGPTTVLLFGAHTNLALLLMAHPRLARNIDRVYVSGGAVRA-------------ADPAGN 114
Query: 154 LYPD-DSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTY 212
L+ +NP+AEFNIF DPFAAY V+HSGIP+T+IPLDAT TI V+E F EF++ Q TY
Sbjct: 115 LFTAFATNPFAEFNIFGDPFAAYQVIHSGIPITMIPLDATNTISVTEEFVSEFQQHQQTY 174
Query: 213 EAQYCFQSLKMIRDTWSGSPPFH--EAYCMWDSFMAGVALSIMLNSSSHNGENACSEMEY 270
EAQYCFQSL + G H +Y MWDSF AGVALS M N +GEN SE+EY
Sbjct: 175 EAQYCFQSLDKVLMRLRGRSNGHGNTSYYMWDSFAAGVALSSMRNGEV-DGENEFSELEY 233
Query: 271 MNLTVVTSNEPYGISDGSNPLIDGLEVPKFNVQKNGVHSGHVQTGMQDPFCLESG--KAK 328
MN+TV+TSN+PYG DGSNP DG PK +++ GVHSGHVQTG++D FCL G + +
Sbjct: 234 MNITVITSNKPYGKRDGSNPFFDGRATPKLGLKEGGVHSGHVQTGIRDSFCLVPGSNRGR 293
Query: 329 CQDGYIKEVKGPEAVRVLVATKAKPSQDLGSLLEKEFYLSFLNALNFPQQAGRFNISTQF 388
C+DGY +EV GPE VRV VAT+AKP+ D S LEKEF SFL LN P+Q G FNI+TQF
Sbjct: 294 CEDGYTREVSGPEGVRVRVATRAKPNTDKNSSLEKEFSKSFLEVLNRPEQTGLFNINTQF 353
Query: 389 PYYEEILRKPDFGKKLMGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWAT 448
PYY E+L KP F GKPV+FD+DMS GDF++LIYLLK P+E+I+LK +LV+ GWA
Sbjct: 354 PYYREVLYKPVFRNVSRGKPVIFDMDMSPGDFVSLIYLLKTPIEVIDLKAVLVNGNGWAN 413
Query: 449 SATVDVVYDLLHMMGRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDT 508
A++D+VYD+LHMMGRDDIPVGLG+ A+G P GC + AIP GSGGF+DSDT
Sbjct: 414 IASIDIVYDILHMMGRDDIPVGLGNTTALG------IPTLGCNNSYAIPHGSGGFIDSDT 467
Query: 509 LYGLARDLPRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILT 568
LYGLAR LPRSPRRY E+ D PE RQPLA++VW+S+ + ++PG KIT+LT
Sbjct: 468 LYGLARSLPRSPRRYAPESL---------DHPEDRQPLALEVWQSVRKQLDPGEKITVLT 518
Query: 569 NGPLTNLAQI-IGLQNSSSVIQDVYIVGG-NKGQDNEKGNVFTVPSSKYAEFNMFLDPLA 626
NGPLTN+A I + +++SSVI+ VY+VGG K +E GN+FTVPS+K+AEFN+FLDPLA
Sbjct: 519 NGPLTNMANISLSDRDASSVIERVYVVGGLIKDGGDENGNLFTVPSNKHAEFNIFLDPLA 578
Query: 627 AKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHS 686
AK V ES L+I LIPL QR+ ASF +L L D + T ES F LL L LQ
Sbjct: 579 AKTVLESDLKIALIPLTAQRKAASFRAVLAALEDIQHTHESKFVHELLSLLQELQIKQKL 638
Query: 687 YHHVDTFLGEVLGAVILGGNPHLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVLE 746
YHH+D FLGE+LGAV + L + ++K + +I++ + S GQI++++ KLV+VL
Sbjct: 639 YHHLDIFLGEILGAVYMVEGSGLKPSVELKPVSVIANTNKSTDGQIVISKNSAKLVRVLS 698
Query: 747 SLNVAVYYDHFAEVLGDHKQSAVIGSFYDQEKTWNTPPNGIDRLHQAK 794
+ +Y A L + +QSAVIGSF +Q+ W+ P N + + K
Sbjct: 699 DFDGEIYSKQLANSLANKRQSAVIGSFEEQKAIWSRPVNSSGNIKKQK 746
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 107/230 (46%), Gaps = 46/230 (20%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQRLYVNT 60
MM RDDIPVG+G N T L G+ T G C AIP G ++++
Sbjct: 426 MMGRDDIPVGLG-------NTTAL------------GIPTLG-CNNSYAIPHGSGGFIDS 465
Query: 61 N--YGLRKAFLPQGGRKYAPL-------RQPTA----QQVLINAISAGPITVFVMGSHTN 107
+ YGL ++ LP+ R+YAP RQP A Q V ITV G TN
Sbjct: 466 DTLYGLARS-LPRSPRRYAPESLDHPEDRQPLALEVWQSVRKQLDPGEKITVLTNGPLTN 524
Query: 108 FAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNI 167
A +++ IE +YV+GG I+ + D GNL+ SN +AEFNI
Sbjct: 525 MANISLSDRDASSVIERVYVVGGLIK------------DGGDENGNLFTVPSNKHAEFNI 572
Query: 168 FSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYC 217
F DP AA TVL S + + +IPL A + E Q+T+E+++
Sbjct: 573 FLDPLAAKTVLESDLKIALIPLTAQRKAASFRAVLAALEDIQHTHESKFV 622
>gi|293335697|ref|NP_001169740.1| hypothetical protein [Zea mays]
gi|224031325|gb|ACN34738.1| unknown [Zea mays]
gi|413949321|gb|AFW81970.1| hypothetical protein ZEAMMB73_452326 [Zea mays]
Length = 805
Score = 799 bits (2064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/799 (53%), Positives = 548/799 (68%), Gaps = 49/799 (6%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQRLYVNT 60
MM RDDIPVGVGG+GGI G + DVGGY P+IDQGMST G CRYRQAIP+ RL V+T
Sbjct: 27 MMGRDDIPVGVGGDGGISYAGDVQRDVGGYLPLIDQGMSTDGGCRYRQAIPLSGRLDVDT 86
Query: 61 NYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKK 120
N G+RK FLP+G R Y PLRQPTAQ+V+ +A+SAGP +V ++G+HTN A+ LM+ P L++
Sbjct: 87 NSGVRKGFLPRGSRAYRPLRQPTAQRVMADALSAGPTSVLLLGTHTNLALLLMSRPRLRR 146
Query: 121 NIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY-PDDSNPYAEFNIFSDPFAAYTVLH 179
N+E +YV GGA+R + GNL+ +NP AEFN+F DPFAAY VLH
Sbjct: 147 NVERVYVSGGAVR----------------AAGNLFTAAAANPVAEFNVFGDPFAAYLVLH 190
Query: 180 SGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSL--KMIRDTWSGSPPFHEA 237
SG+P+T+IPLDAT TIPV+E F+ EF+RRQ TYEAQYC SL + R +
Sbjct: 191 SGVPITMIPLDATNTIPVTEAFYSEFQRRQRTYEAQYCLLSLDGALARQRRRSDSHDNTG 250
Query: 238 YCMWDSFMAGVALSIMLNSSSHNGENACSEMEYMNLTVVTSNEPYGI-SDGSNPLIDGLE 296
+ +WD F GVA+S M + N +E+EYMN+TVVTSN+PYG DGSNP DG
Sbjct: 251 FYLWDPFAVGVAISSMRHGDGET-SNEFAELEYMNVTVVTSNKPYGARDDGSNPFFDGRT 309
Query: 297 VPKFNVQKNGVHSGHVQTGMQDPFCLESG--KAKCQDGYIKEVKGPEAVRVLVATKAKPS 354
PKF +++ GVHSGHV+TG++DPFCL G + +CQDGY KEV GPEAV++LVAT+A+P+
Sbjct: 310 TPKFGLREGGVHSGHVETGIRDPFCLVPGSNRGRCQDGYTKEVAGPEAVQMLVATRARPN 369
Query: 355 QDLGSLLEKEFYLSFLNALNFPQQAGRFNISTQFPYYEEILRKPDFGKKLMG-----KPV 409
+ S L+K+F +FL LN PQ GRFNISTQFPYY E+L KPD + KPV
Sbjct: 370 TNKSSPLDKKFMETFLEVLNLPQNTGRFNISTQFPYYREVLYKPDSIMNVTRRGGKPKPV 429
Query: 410 VFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIPV 469
VFD+DMS GDF++LI LLK P I+LK +LV+ GWA SA++D+VYD+LHMMGRDDIPV
Sbjct: 430 VFDMDMSPGDFVSLICLLKEPRHEIDLKAVLVNGNGWANSASIDIVYDVLHMMGRDDIPV 489
Query: 470 GLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENSV 529
GLG+ A+G P GC + AIP GSGGF+DSDTLYGLAR LPRSPRR+
Sbjct: 490 GLGNATALGS------PTLGCNNSYAIPQGSGGFVDSDTLYGLARSLPRSPRRFI----- 538
Query: 530 RFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ--NSSSV 587
S D D PE R P A DVW+S+ + + PG KIT LT+GPLTNLA II L ++ SV
Sbjct: 539 ----SDDLDHPERRHPSAFDVWRSVRKQLGPGQKITALTSGPLTNLASIISLSDMDAGSV 594
Query: 588 IQ-DVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQR 646
I+ + G + +++GNVFTVPS++YAEFNMFLDPLAAK V ES L I LIPL++QR
Sbjct: 595 IERVYVVGGVVRDGGDDRGNVFTVPSNRYAEFNMFLDPLAAKTVLESGLNITLIPLNVQR 654
Query: 647 RVASFFKILHKLRDRKK-TPESVFSQRLLQGLMTLQQSHHS-YHHVDTFLGEVLGAVILG 704
+V+SF +L L+ + TPES +RLL L LQ+ YHH+D FLGEVLGAV +
Sbjct: 655 KVSSFEGVLGALKQHTQHTPESKLVRRLLLLLQQLQREQRKFYHHMDIFLGEVLGAVYMV 714
Query: 705 GNPHLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEVLGDH 764
+L + ++KS+ I+++ S G I+V ++ K V VL SLN YYDH A L +H
Sbjct: 715 QGSNLEPSVEVKSICIVANTTESINGLILV-KKSAKPVDVLYSLNTGAYYDHLANSLVNH 773
Query: 765 KQSAVIGSFYDQEKTWNTP 783
KQSA IGSF +Q+ W+ P
Sbjct: 774 KQSAPIGSFGEQKAIWSRP 792
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 126/271 (46%), Gaps = 43/271 (15%)
Query: 436 LKGILVSSTGWATSA-TVDVVYDLLHMMGRDDIPVGLGDVFAVG-------EVNPKFPPI 487
++ I +S+ W+ + V+ +YD+L+MMGRDDIPVG+G + +V P I
Sbjct: 1 MQAITISANAWSDAGHAVNHLYDMLYMMGRDDIPVGVGGDGGISYAGDVQRDVGGYLPLI 60
Query: 488 -------GGCKYAKAIPLGSGGFLDSDTLYGLARD-LPRSPRRYTAENSVRFGASQDNDD 539
GGC+Y +AIPL G LD DT G+ + LPR R Y
Sbjct: 61 DQGMSTDGGCRYRQAIPL--SGRLDVDTNSGVRKGFLPRGSRAYR--------------- 103
Query: 540 PELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQII-GLQNSSSVIQDVYIVGGNK 598
LRQP A V + +++ G ++L G TNLA ++ ++ VY+ GG
Sbjct: 104 -PLRQPTAQRV---MADALSAG-PTSVLLLGTHTNLALLLMSRPRLRRNVERVYVSGGAV 158
Query: 599 GQDNEKGNVFTVPSSK-YAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHK 657
GN+FT ++ AEFN+F DP AA V S + I +IPL + +
Sbjct: 159 ---RAAGNLFTAAAANPVAEFNVFGDPFAAYLVLHSGVPITMIPLDATNTIPVTEAFYSE 215
Query: 658 LRDRKKTPESVFSQRLLQGLMTLQQSHHSYH 688
+ R++T E+ + L G + Q+ H
Sbjct: 216 FQRRQRTYEAQYCLLSLDGALARQRRRSDSH 246
>gi|326490235|dbj|BAJ84781.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 673
Score = 797 bits (2059), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/704 (57%), Positives = 500/704 (71%), Gaps = 44/704 (6%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQR---LY 57
MM RDDI VGVGG+GGI G I PDVGGY P+IDQGMSTAG CRYRQAIP G+R L
Sbjct: 1 MMGRDDIAVGVGGDGGISDAGEIRPDVGGYLPLIDQGMSTAGGCRYRQAIPPGRRGGRLD 60
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPH 117
+TN GLR+ FLPQG R YAPLRQPTAQQV+++ +SAGP T+ + G+HTN A+ LM +PH
Sbjct: 61 TDTNGGLRRGFLPQGPRGYAPLRQPTAQQVMVDTVSAGPTTLLLFGTHTNAALLLMTHPH 120
Query: 118 LKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPD-DSNPYAEFNIFSDPFAAYT 176
L++N+E +YV+GG +R GNL+ +NP+AEFN+F DPFAAY
Sbjct: 121 LRRNVERVYVLGGGVRV----------------TGNLFTAYGANPFAEFNVFGDPFAAYQ 164
Query: 177 VLHSGIPVTIIPLDATKTIPVSENFFVEF-ERRQNTYEAQYCFQSL-KMIRDTWSGSPPF 234
VLHSG+P+T++PLDAT TIPV+E FF EF +R Q T EA+YCFQSL +++R +P
Sbjct: 165 VLHSGVPITLVPLDATNTIPVTEEFFGEFGQRWQTTPEARYCFQSLDQVLRRHRRPAPGL 224
Query: 235 H--EAYCMWDSFMAGVALSIMLNSSSHNGENACSEMEYMNLTVVTSNEPYGISDGSNPLI 292
H Y MWDSF AGVA S M N + NG N +E+EYMN+TV+TSN+PYG+ DGSNP
Sbjct: 225 HGSTGYYMWDSFAAGVAFSSMRNGEA-NGANDFTELEYMNITVITSNKPYGVRDGSNPFF 283
Query: 293 DGLEVPKFNVQKNGVHSGHVQTGMQDPFCLESGK--AKCQDGYIKEVKGPEAVRVLVATK 350
DG PKF +++ GVHSGHVQTG++D FCL G +CQDGY KEV G E VRV VAT
Sbjct: 284 DGRATPKFGLEEGGVHSGHVQTGIRDSFCLVPGSNAGRCQDGYTKEVTGFEGVRVRVATS 343
Query: 351 AKPSQDLGSLLEKEFYLSFLNALNFPQQAGRFNISTQFPYYEEILRKPDFGKKLMGKPVV 410
AKP+ D S ++EF SFL LN P+QAGRFNIS QFPYY E+L KPDF KPV+
Sbjct: 344 AKPNTDNNSAFDREFSKSFLEVLNLPKQAGRFNISAQFPYYREVLYKPDFINMSRAKPVI 403
Query: 411 FDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIPVG 470
FD+DMS GDF++LIYLLK P E+I++KG+LV+ GWA A++D+VYD+LHMMGRDDIPVG
Sbjct: 404 FDMDMSPGDFVSLIYLLKAPREVIDVKGVLVNGNGWANIASIDIVYDILHMMGRDDIPVG 463
Query: 471 LGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENSVR 530
LG+ A+G P GC AIP GSGG++DSDTLYGLAR LPRSPR YT E++
Sbjct: 464 LGNTTAMGN------PTLGCNNVYAIPQGSGGYIDSDTLYGLARLLPRSPRSYTPEST-- 515
Query: 531 FGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQI-IGLQNSSSVIQ 589
DDPE RQPLA +VW+S+ + PG KIT+LT+GPLTNLA I + + + SVI+
Sbjct: 516 -------DDPEHRQPLAFEVWQSVRRQLGPGDKITLLTSGPLTNLANISLSDREAISVIE 568
Query: 590 DVYIVGG-NKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
VY+VGG + + +EKGNVFTVPS++YAEFNMFLDPLAAK V ES + I LIPL QR+
Sbjct: 569 RVYVVGGLIRDEGHEKGNVFTVPSNRYAEFNMFLDPLAAKTVLESNMNITLIPLTAQRKA 628
Query: 649 ASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDT 692
SF +L L ++TPES F Q+L L LQ YHHV T
Sbjct: 629 NSFGAVLEALEQTRQTPESKFVQQLFSLLKKLQSKEKLYHHVVT 672
>gi|413949320|gb|AFW81969.1| hypothetical protein ZEAMMB73_452326 [Zea mays]
Length = 831
Score = 760 bits (1963), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/797 (52%), Positives = 526/797 (65%), Gaps = 87/797 (10%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQRLYVNT 60
MM RDDIPVGVGG+GGI G + DVGGY P+IDQGMST G CRYRQAIP+ RL V+T
Sbjct: 95 MMGRDDIPVGVGGDGGISYAGDVQRDVGGYLPLIDQGMSTDGGCRYRQAIPLSGRLDVDT 154
Query: 61 NYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKK 120
N G+RK FLP+G R Y PLRQPTAQ+V+ +A+SAGP +V ++G+HTN A+ LM+ P L++
Sbjct: 155 NSGVRKGFLPRGSRAYRPLRQPTAQRVMADALSAGPTSVLLLGTHTNLALLLMSRPRLRR 214
Query: 121 NIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY-PDDSNPYAEFNIFSDPFAAYTVLH 179
N+E +YV GGA+R + GNL+ +NP AEFN+F DPFAAY VLH
Sbjct: 215 NVERVYVSGGAVR----------------AAGNLFTAAAANPVAEFNVFGDPFAAYLVLH 258
Query: 180 SGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPFHEAYC 239
SG+P+T+IPLDAT TIPV+E F+ EF+RRQ TYEAQYC SL +
Sbjct: 259 SGVPITMIPLDATNTIPVTEAFYSEFQRRQRTYEAQYCLLSLD-------------GGFY 305
Query: 240 MWDSFMAGVALSIMLNSSSHNGENACSEMEYMNLTVVTSNEPYGI-SDGSNPLIDGLEVP 298
+WD F GVA+S M + N +E+EYMN+TVVTSN+PYG DGSNP DG P
Sbjct: 306 LWDPFAVGVAISSMRHGDGET-SNEFAELEYMNVTVVTSNKPYGARDDGSNPFFDGRTTP 364
Query: 299 KFNVQKNGVHSGHVQTGMQDPFCLESG--KAKCQDGYIKEVKGPEAVRVLVATKAKPSQD 356
KF +++ GVHSGHV+TG++DPFCL G + +CQDGY KEV GPEAV+V
Sbjct: 365 KFGLREGGVHSGHVETGIRDPFCLVPGSNRGRCQDGYTKEVAGPEAVQV----------- 413
Query: 357 LGSLLEKEFYLSFLNALNFPQQAGRFNISTQFPYYEEILRKPDFGKKLMG-----KPVVF 411
LN PQ GRFNISTQFPYY E+L KPD + KPVVF
Sbjct: 414 ----------------LNLPQNTGRFNISTQFPYYREVLYKPDSIMNVTRRGGKPKPVVF 457
Query: 412 DIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIPVGL 471
D+DMS GDF++LI LLK P I+LK +LV+ GWA SA++D+VYD+LHMMGRDDIPVGL
Sbjct: 458 DMDMSPGDFVSLICLLKEPRHEIDLKAVLVNGNGWANSASIDIVYDVLHMMGRDDIPVGL 517
Query: 472 GDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENSVRF 531
G+ A+G P GC + AIP GSGGF+DSDTLYGLAR LPRSPRR+
Sbjct: 518 GNATALGS------PTLGCNNSYAIPQGSGGFVDSDTLYGLARSLPRSPRRFI------- 564
Query: 532 GASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ--NSSSVIQ 589
S D D PE R P A DVW+S+ + + PG KIT LT+GPLTNLA II L ++ SVI+
Sbjct: 565 --SDDLDHPERRHPSAFDVWRSVRKQLGPGQKITALTSGPLTNLASIISLSDMDAGSVIE 622
Query: 590 -DVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
+ G + +++GNVFTVPS++YAEFNMFLDPLAAK V ES L I LIPL++QR+V
Sbjct: 623 RVYVVGGVVRDGGDDRGNVFTVPSNRYAEFNMFLDPLAAKTVLESGLNITLIPLNVQRKV 682
Query: 649 ASFFKILHKLRDRKK-TPESVFSQRLLQGLMTLQQSHHS-YHHVDTFLGEVLGAVILGGN 706
+SF +L L+ + TPES +RLL L LQ+ YHH+D FLGEVLGAV +
Sbjct: 683 SSFEGVLGALKQHTQHTPESKLVRRLLLLLQQLQREQRKFYHHMDIFLGEVLGAVYMVQG 742
Query: 707 PHLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEVLGDHKQ 766
+L + ++KS+ I+++ S G I+V ++ K V VL SLN YYDH A L +HKQ
Sbjct: 743 SNLEPSVEVKSICIVANTTESINGLILV-KKSAKPVDVLYSLNTGAYYDHLANSLVNHKQ 801
Query: 767 SAVIGSFYDQEKTWNTP 783
SA IGSF +Q+ W+ P
Sbjct: 802 SAPIGSFGEQKAIWSRP 818
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 124/261 (47%), Gaps = 43/261 (16%)
Query: 434 INLKGILVSSTGWATSA-TVDVVYDLLHMMGRDDIPVGLGDVFAVG-------EVNPKFP 485
I++K I +S+ W+ + V+ +YD+L+MMGRDDIPVG+G + +V P
Sbjct: 67 IDVKAITISANAWSDAGHAVNHLYDMLYMMGRDDIPVGVGGDGGISYAGDVQRDVGGYLP 126
Query: 486 PI-------GGCKYAKAIPLGSGGFLDSDTLYGLARD-LPRSPRRYTAENSVRFGASQDN 537
I GGC+Y +AIPL G LD DT G+ + LPR R Y
Sbjct: 127 LIDQGMSTDGGCRYRQAIPL--SGRLDVDTNSGVRKGFLPRGSRAYR------------- 171
Query: 538 DDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQII-GLQNSSSVIQDVYIVGG 596
LRQP A V + +++ G ++L G TNLA ++ ++ VY+ GG
Sbjct: 172 ---PLRQPTAQRV---MADALSAG-PTSVLLLGTHTNLALLLMSRPRLRRNVERVYVSGG 224
Query: 597 NKGQDNEKGNVFTVPSSK-YAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKIL 655
GN+FT ++ AEFN+F DP AA V S + I +IPL +
Sbjct: 225 AV---RAAGNLFTAAAANPVAEFNVFGDPFAAYLVLHSGVPITMIPLDATNTIPVTEAFY 281
Query: 656 HKLRDRKKTPESVFSQRLLQG 676
+ + R++T E+ + L G
Sbjct: 282 SEFQRRQRTYEAQYCLLSLDG 302
>gi|50878312|gb|AAT85087.1| putative inosine-uridine preferring nucleoside hydrolase [Oryza
sativa Japonica Group]
Length = 599
Score = 635 bits (1639), Expect = e-179, Method: Compositional matrix adjust.
Identities = 331/615 (53%), Positives = 423/615 (68%), Gaps = 22/615 (3%)
Query: 186 IIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPFH--EAYCMWDS 243
+IPLDAT TI V+E F EF++ Q TYEAQYCFQSL + G H +Y MWDS
Sbjct: 1 MIPLDATNTISVTEEFVSEFQQHQQTYEAQYCFQSLDKVLMRLRGRSNGHGNTSYYMWDS 60
Query: 244 FMAGVALSIMLNSSSHNGENACSEMEYMNLTVVTSNEPYGISDGSNPLIDGLEVPKFNVQ 303
F AGVALS M N +GEN SE+EYMN+TV+TSN+PYG DGSNP DG PK ++
Sbjct: 61 FAAGVALSSMRNGEV-DGENEFSELEYMNITVITSNKPYGKRDGSNPFFDGRATPKLGLK 119
Query: 304 KNGVHSGHVQTGMQDPFCLESG--KAKCQDGYIKEVKGPEAVRVLVATKAKPSQDLGSLL 361
+ GVHSGHVQTG++D FCL G + +C+DGY +EV GPE VRV VAT+AKP+ D S L
Sbjct: 120 EGGVHSGHVQTGIRDSFCLVPGSNRGRCEDGYTREVSGPEGVRVRVATRAKPNTDKNSSL 179
Query: 362 EKEFYLSFLNALNFPQQAGRFNISTQFPYYEEILRKPDFGKKLMGKPVVFDIDMSAGDFL 421
EKEF SFL LN P+Q G FNI+TQFPYY E+L KP F GKPV+FD+DMS GDF+
Sbjct: 180 EKEFSKSFLEVLNRPEQTGLFNINTQFPYYREVLYKPVFRNVSRGKPVIFDMDMSPGDFV 239
Query: 422 ALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIPVGLGDVFAVGEVN 481
+LIYLLK P+E+I+LK +LV+ GWA A++D+VYD+LHMMGRDDIPVGLG+ A+G
Sbjct: 240 SLIYLLKTPIEVIDLKAVLVNGNGWANIASIDIVYDILHMMGRDDIPVGLGNTTALG--- 296
Query: 482 PKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENSVRFGASQDNDDPE 541
P GC + AIP GSGGF+DSDTLYGLAR LPRSPRRY E+ D PE
Sbjct: 297 ---IPTLGCNNSYAIPHGSGGFIDSDTLYGLARSLPRSPRRYAPESL---------DHPE 344
Query: 542 LRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQI-IGLQNSSSVIQDVYIVGG-NKG 599
RQPLA++VW+S+ + ++PG KIT+LTNGPLTN+A I + +++SSVI+ VY+VGG K
Sbjct: 345 DRQPLALEVWQSVRKQLDPGEKITVLTNGPLTNMANISLSDRDASSVIERVYVVGGLIKD 404
Query: 600 QDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLR 659
+E GN+FTVPS+K+AEFN+FLDPLAAK V ES L+I LIPL QR+ ASF +L L
Sbjct: 405 GGDENGNLFTVPSNKHAEFNIFLDPLAAKTVLESDLKIALIPLTAQRKAASFRAVLAALE 464
Query: 660 DRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKSLE 719
D + T ES F LL L LQ YHH+D FLGE+LGAV + L + ++K +
Sbjct: 465 DIQHTHESKFVHELLSLLQELQIKQKLYHHLDIFLGEILGAVYMVEGSGLKPSVELKPVS 524
Query: 720 IISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEVLGDHKQSAVIGSFYDQEKT 779
+I++ + S GQI++++ KLV+VL + +Y A L + +QSAVIGSF +Q+
Sbjct: 525 VIANTNKSTDGQIVISKNSAKLVRVLSDFDGEIYSKQLANSLANKRQSAVIGSFEEQKAI 584
Query: 780 WNTPPNGIDRLHQAK 794
W+ P N + + K
Sbjct: 585 WSRPVNSSGNIKKQK 599
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 107/230 (46%), Gaps = 46/230 (20%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQRLYVNT 60
MM RDDIPVG+G N T L G+ T G C AIP G ++++
Sbjct: 279 MMGRDDIPVGLG-------NTTAL------------GIPTLG-CNNSYAIPHGSGGFIDS 318
Query: 61 N--YGLRKAFLPQGGRKYAPL-------RQPTA----QQVLINAISAGPITVFVMGSHTN 107
+ YGL ++ LP+ R+YAP RQP A Q V ITV G TN
Sbjct: 319 DTLYGLARS-LPRSPRRYAPESLDHPEDRQPLALEVWQSVRKQLDPGEKITVLTNGPLTN 377
Query: 108 FAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNI 167
A +++ IE +YV+GG I+ + D GNL+ SN +AEFNI
Sbjct: 378 MANISLSDRDASSVIERVYVVGGLIK------------DGGDENGNLFTVPSNKHAEFNI 425
Query: 168 FSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYC 217
F DP AA TVL S + + +IPL A + E Q+T+E+++
Sbjct: 426 FLDPLAAKTVLESDLKIALIPLTAQRKAASFRAVLAALEDIQHTHESKFV 475
>gi|47777393|gb|AAT38027.1| putative inosine-uridine preferring nucleoside hydrolase [Oryza
sativa Japonica Group]
Length = 584
Score = 631 bits (1628), Expect = e-178, Method: Compositional matrix adjust.
Identities = 329/613 (53%), Positives = 421/613 (68%), Gaps = 33/613 (5%)
Query: 186 IIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPFHEAYCMWDSFM 245
+IPLDAT TI V+E F EF++ Q TYEAQYCFQSL ++Y MWDSF
Sbjct: 1 MIPLDATNTISVTEEFVSEFQQHQQTYEAQYCFQSLD-------------KSYYMWDSFA 47
Query: 246 AGVALSIMLNSSSHNGENACSEMEYMNLTVVTSNEPYGISDGSNPLIDGLEVPKFNVQKN 305
AGVALS M N +GEN SE+EYMN+TV+TSN+PYG DGSNP DG PK +++
Sbjct: 48 AGVALSSMRNGEV-DGENEFSELEYMNITVITSNKPYGKRDGSNPFFDGRATPKLGLKEG 106
Query: 306 GVHSGHVQTGMQDPFCLESG--KAKCQDGYIKEVKGPEAVRVLVATKAKPSQDLGSLLEK 363
GVHSGHVQTG++D FCL G + +C+DGY +EV GPE VRV VAT+AKP+ D S LEK
Sbjct: 107 GVHSGHVQTGIRDSFCLVPGSNRGRCEDGYTREVSGPEGVRVRVATRAKPNTDKNSSLEK 166
Query: 364 EFYLSFLNALNFPQQAGRFNISTQFPYYEEILRKPDFGKKLMGKPVVFDIDMSAGDFLAL 423
EF SFL LN P+Q G FNI+TQFPYY E+L KP F GKPV+FD+DMS GDF++L
Sbjct: 167 EFSKSFLEVLNRPEQTGLFNINTQFPYYREVLYKPVFRNVSRGKPVIFDMDMSPGDFVSL 226
Query: 424 IYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIPVGLGDVFAVGEVNPK 483
IYLLK P+E+I+LK +LV+ GWA A++D+VYD+LHMMGRDDIPVGLG+ A+G
Sbjct: 227 IYLLKTPIEVIDLKAVLVNGNGWANIASIDIVYDILHMMGRDDIPVGLGNTTALG----- 281
Query: 484 FPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENSVRFGASQDNDDPELR 543
P GC + AIP GSGGF+DSDTLYGLAR LPRSPRRY E+ D PE R
Sbjct: 282 -IPTLGCNNSYAIPHGSGGFIDSDTLYGLARSLPRSPRRYAPESL---------DHPEDR 331
Query: 544 QPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQI-IGLQNSSSVIQDVYIVGG-NKGQD 601
QPLA++VW+S+ + ++PG KIT+LTNGPLTN+A I + +++SSVI+ VY+VGG K
Sbjct: 332 QPLALEVWQSVRKQLDPGEKITVLTNGPLTNMANISLSDRDASSVIERVYVVGGLIKDGG 391
Query: 602 NEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDR 661
+E GN+FTVPS+K+AEFN+FLDPLAAK V ES L+I LIPL QR+ ASF +L L D
Sbjct: 392 DENGNLFTVPSNKHAEFNIFLDPLAAKTVLESDLKIALIPLTAQRKAASFRAVLAALEDI 451
Query: 662 KKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKSLEII 721
+ T ES F LL L LQ YHH+D FLGE+LGAV + L + ++K + +I
Sbjct: 452 QHTHESKFVHELLSLLQELQIKQKLYHHLDIFLGEILGAVYMVEGSGLKPSVELKPVSVI 511
Query: 722 SDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEVLGDHKQSAVIGSFYDQEKTWN 781
++ + S GQI++++ KLV+VL + +Y A L + +QSAVIGSF +Q+ W+
Sbjct: 512 ANTNKSTDGQIVISKNSAKLVRVLSDFDGEIYSKQLANSLANKRQSAVIGSFEEQKAIWS 571
Query: 782 TPPNGIDRLHQAK 794
P N + + K
Sbjct: 572 RPVNSSGNIKKQK 584
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 107/230 (46%), Gaps = 46/230 (20%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQRLYVNT 60
MM RDDIPVG+G N T L G+ T G C AIP G ++++
Sbjct: 264 MMGRDDIPVGLG-------NTTAL------------GIPTLG-CNNSYAIPHGSGGFIDS 303
Query: 61 N--YGLRKAFLPQGGRKYAPL-------RQPTA----QQVLINAISAGPITVFVMGSHTN 107
+ YGL ++ LP+ R+YAP RQP A Q V ITV G TN
Sbjct: 304 DTLYGLARS-LPRSPRRYAPESLDHPEDRQPLALEVWQSVRKQLDPGEKITVLTNGPLTN 362
Query: 108 FAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNI 167
A +++ IE +YV+GG I+ + D GNL+ SN +AEFNI
Sbjct: 363 MANISLSDRDASSVIERVYVVGGLIK------------DGGDENGNLFTVPSNKHAEFNI 410
Query: 168 FSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYC 217
F DP AA TVL S + + +IPL A + E Q+T+E+++
Sbjct: 411 FLDPLAAKTVLESDLKIALIPLTAQRKAASFRAVLAALEDIQHTHESKFV 460
>gi|15239592|ref|NP_197390.1| Inosine-uridine preferring nucleoside hydrolase family protein
[Arabidopsis thaliana]
gi|332005242|gb|AED92625.1| Inosine-uridine preferring nucleoside hydrolase family protein
[Arabidopsis thaliana]
Length = 550
Score = 629 bits (1623), Expect = e-177, Method: Compositional matrix adjust.
Identities = 314/530 (59%), Positives = 398/530 (75%), Gaps = 8/530 (1%)
Query: 261 GENACSEMEYMNLTVVTSNEPYGISDGSNPLIDGLEVPKFNVQKNGVHSGHVQTGMQDPF 320
G+N +EMEYMN+TVVTSNEPYG+ D SNP PKFN+ GVHSGHVQ G++DP
Sbjct: 14 GQNDFAEMEYMNITVVTSNEPYGLFDSSNPFFYKRRTPKFNLTLGGVHSGHVQRGLRDPI 73
Query: 321 CLE-SGKAKCQDGYIKEVKGPEAVRVLVATKAKPSQDLGSLLEKEFYLSFLNALNFPQQA 379
C+ SGK C+DGY KE GP++VRVLVAT+AKPS++L S L++EFY FL LN P++
Sbjct: 74 CISTSGKGNCRDGYTKETSGPDSVRVLVATRAKPSKNLNSELDREFYDHFLEVLNRPEET 133
Query: 380 GRFNISTQFPYYEEILRKPDFG-KKLMGKPVVFDIDMSAGDFLALIYLLKLPVELINLKG 438
GRF+ STQF YY E L + +L GKPVVFD+DMSAGDFL+L YLLK+PVE+I+LK
Sbjct: 134 GRFHFSTQFLYYREELFIAELNNSRLGGKPVVFDMDMSAGDFLSLFYLLKVPVEIIDLKA 193
Query: 439 ILVSSTGWATSATVDVVYDLLHMMGRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPL 498
++VS TGWA +AT+DVVYDLLHMMGRDDIPVGLGD+FA+ + P FP G CKYAKA+P
Sbjct: 194 VIVSPTGWANTATIDVVYDLLHMMGRDDIPVGLGDMFAINQSEPVFPSAGDCKYAKAVPQ 253
Query: 499 GSGGFLDSDTLYGLARDLPRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESI 558
G GGFLDSDTLYGLARDLPRSPRRY ENSV GA D D PELRQPLA++VW+++ +S+
Sbjct: 254 GCGGFLDSDTLYGLARDLPRSPRRY--ENSVAHGAPSDTDRPELRQPLALEVWQNLTKSV 311
Query: 559 EPGSKITILTNGPLTNLAQIIGL-QNSSSVIQDVYIVGGNKGQ-DNEKGNVFTVPSSKYA 616
+ SKIT+LTNGPLT+LA+II +NSSS+I++VYIVGG+ + ++KGN+FTVPS+ YA
Sbjct: 312 DEVSKITVLTNGPLTSLAKIISSDKNSSSIIKEVYIVGGHISRGKSDKGNIFTVPSNSYA 371
Query: 617 EFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQG 676
EFNMFLDPLAAK V ES L I LIPL QR SF +L++L KTPE+ F +RLL
Sbjct: 372 EFNMFLDPLAAKTVLESGLNITLIPLATQREF-SFQAMLNRLYSSTKTPEARFVKRLLTR 430
Query: 677 LMTLQQSHHSYHHVDTFLGEVLGAVILGGN-PHLNQTYKIKSLEIISDGDISKVGQIIVN 735
L L Q Y H+D FLGE+LGA+ LGG+ L + + +++I++GD SK G I+++
Sbjct: 431 LQALHQKQRRYMHMDMFLGEILGAIFLGGDHALLKPKMRTEYIKVIAEGDESKDGHILID 490
Query: 736 QEQGKLVKVLESLNVAVYYDHFAEVLGDHKQSAVIGSFYDQEKTWNTPPN 785
+ +GK +K+LE +++ Y+ FA L D KQSAVIGSF +Q WNTPP+
Sbjct: 491 KLRGKQIKILERVDLRGCYESFASRLDDKKQSAVIGSFEEQRMKWNTPPS 540
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 105/209 (50%), Gaps = 47/209 (22%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIP--VGQRLYV 58
MM RDDIPVG+G I + + P +AG+C+Y +A+P G L
Sbjct: 216 MMGRDDIPVGLGDMFAINQSEPVFP--------------SAGDCKYAKAVPQGCGGFLDS 261
Query: 59 NTNYGLRKAFLPQGGRKY-------AP-------LRQPTAQQVLINAISA----GPITVF 100
+T YGL + LP+ R+Y AP LRQP A +V N + ITV
Sbjct: 262 DTLYGLARD-LPRSPRRYENSVAHGAPSDTDRPELRQPLALEVWQNLTKSVDEVSKITVL 320
Query: 101 VMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSN 160
G T+ A + ++ + I+ +Y++GG I + +S++ GN++ SN
Sbjct: 321 TNGPLTSLAKIISSDKNSSSIIKEVYIVGGHI--------SRGKSDK----GNIFTVPSN 368
Query: 161 PYAEFNIFSDPFAAYTVLHSGIPVTIIPL 189
YAEFN+F DP AA TVL SG+ +T+IPL
Sbjct: 369 SYAEFNMFLDPLAAKTVLESGLNITLIPL 397
>gi|297807931|ref|XP_002871849.1| inosine-uridine preferring nucleoside hydrolase family protein
[Arabidopsis lyrata subsp. lyrata]
gi|297317686|gb|EFH48108.1| inosine-uridine preferring nucleoside hydrolase family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 540
Score = 622 bits (1604), Expect = e-175, Method: Compositional matrix adjust.
Identities = 311/528 (58%), Positives = 393/528 (74%), Gaps = 13/528 (2%)
Query: 262 ENACSEMEYMNLTVVTSNEPYGISDGSNPLIDGLEVPKFNVQKNGVHSGHVQTGMQDPFC 321
EN +EMEYMN+T+VTSNEPYGI D SNP PKFN+ GVHSGHVQ G++DP C
Sbjct: 15 ENDFAEMEYMNITIVTSNEPYGIPDSSNPFFYKKRTPKFNLTLGGVHSGHVQRGLRDPIC 74
Query: 322 L-ESGKAKCQDGYIKEVKGPEAVRVLVATKAKPSQDLGSLLEKEFYLSFLNALNFPQQAG 380
+ SGK C+DGY KE GP++VRVLVAT+AKPS++ S L++EFY FL LN P + G
Sbjct: 75 ISRSGKGNCKDGYTKETFGPDSVRVLVATRAKPSKNFNSELDREFYDDFLEVLNRPGETG 134
Query: 381 RFNISTQFPYYEEILRKPDFGK-KLMGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGI 439
RFN STQF YY E L + +L GKPV+FD+DMSAGDFL+L YLLK+PVE+I+LK +
Sbjct: 135 RFNFSTQFLYYREELFIANLSNTQLGGKPVIFDMDMSAGDFLSLFYLLKVPVEIIDLKAV 194
Query: 440 LVSSTGWATSATVDVVYDLLHMMGRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLG 499
+VS TGWA +AT+DVVYDLLHMMGRDDIP+GLGD+FA+ + P FP G CKYAKA+P G
Sbjct: 195 IVSPTGWANAATIDVVYDLLHMMGRDDIPIGLGDMFALNQSEPGFPSAGDCKYAKAVPQG 254
Query: 500 SGGFLDSDTLYGLARDLPRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIE 559
GGFLDSDTLYGLARDLPRSPRR TAENSV GA +D D E+RQPLA++VW+++ +S+
Sbjct: 255 CGGFLDSDTLYGLARDLPRSPRRNTAENSVANGAPRDTDRTEIRQPLALEVWQNLTKSVN 314
Query: 560 PGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQD-NEKGNVFTVPSSKYAEF 618
SKIT+LTNGPLT+LA+II +VYIVGG+ ++ ++KGNVFTVPS+ YAEF
Sbjct: 315 EVSKITVLTNGPLTSLAKIIS--------SEVYIVGGHISREKSDKGNVFTVPSNAYAEF 366
Query: 619 NMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLM 678
NMFLDPLAAK + ES L I LIPL QR+ SF +L+KL KTPE+ F +RLL L
Sbjct: 367 NMFLDPLAAKTILESGLNIILIPLATQRKF-SFQPMLNKLYSSAKTPEARFVKRLLARLQ 425
Query: 679 TLQQSHHSYHHVDTFLGEVLGAVILGGN-PHLNQTYKIKSLEIISDGDISKVGQIIVNQE 737
L Q+H Y H+D FLGE+LGAV LGG+ L +++ +++I++GD SK GQI++++
Sbjct: 426 ALHQNHRRYTHIDMFLGEILGAVFLGGDHASLKPKLRVEHIKVIAEGDESKDGQILIDKL 485
Query: 738 QGKLVKVLESLNVAVYYDHFAEVLGDHKQSAVIGSFYDQEKTWNTPPN 785
+GK +K+LE +++ Y FA L D KQSAVIGSF +Q K WNTPP+
Sbjct: 486 RGKQIKILERVDLRGCYVSFASRLDDKKQSAVIGSFEEQGKKWNTPPS 533
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 63/276 (22%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIP--VGQRLYV 58
MM RDDIP+G+G + + + G +AG+C+Y +A+P G L
Sbjct: 216 MMGRDDIPIGLGDMFALNQS--------------EPGFPSAGDCKYAKAVPQGCGGFLDS 261
Query: 59 NTNYGLRKAFLPQGGRKY---------AP-------LRQPTAQQVLINAISA----GPIT 98
+T YGL + LP+ R+ AP +RQP A +V N + IT
Sbjct: 262 DTLYGLARD-LPRSPRRNTAENSVANGAPRDTDRTEIRQPLALEVWQNLTKSVNEVSKIT 320
Query: 99 VFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDD 158
V G T+ A + + +Y++GG I E+ D GN++
Sbjct: 321 VLTNGPLTSLAKIISS---------EVYIVGGHI-----------SREKSDK-GNVFTVP 359
Query: 159 SNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCF 218
SN YAEFN+F DP AA T+L SG+ + +IPL AT+ + + T EA++
Sbjct: 360 SNAYAEFNMFLDPLAAKTILESGLNIILIPL-ATQRKFSFQPMLNKLYSSAKTPEARFVK 418
Query: 219 QSLKMIRDTWSGSPPFHEAYCMWDSFMAGVALSIML 254
+ L ++ H Y D F+ + ++ L
Sbjct: 419 RLLARLQALHQN----HRRYTHIDMFLGEILGAVFL 450
>gi|302756499|ref|XP_002961673.1| hypothetical protein SELMODRAFT_403751 [Selaginella moellendorffii]
gi|300170332|gb|EFJ36933.1| hypothetical protein SELMODRAFT_403751 [Selaginella moellendorffii]
Length = 866
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 330/769 (42%), Positives = 460/769 (59%), Gaps = 71/769 (9%)
Query: 2 MNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQ---RLYV 58
M RDDIP+GVGGEGGI +GTI P+VGGY PIIDQ + T G CRYRQAIP G+ L V
Sbjct: 132 MGRDDIPIGVGGEGGITQDGTIQPNVGGYVPIIDQMLYTCGSCRYRQAIPPGRGAGSLDV 191
Query: 59 NTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHL 118
+T+YGLR FLPQG R Y P Q ++Q+VL+ A+S G TV + GSHTNFA+ LM +P +
Sbjct: 192 DTHYGLRSQFLPQGERHYIPGNQRSSQEVLLEALSTGSNTVLLTGSHTNFALLLMTHPEV 251
Query: 119 KKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVL 178
KKNI+H+Y+MGG + F T +SNP AEFNIF+DPFA+Y V
Sbjct: 252 KKNIQHVYIMGGGESGNLFTGT-----------------ESNPRAEFNIFADPFASYQVF 294
Query: 179 HSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPFHEAY 238
HSG+ +T++PL+AT T+PV++ ER N+ EA Y + L M++ W + F + +
Sbjct: 295 HSGLAITLVPLEATDTVPVTQELITALERSMNSLEANYTYHMLSMLKHIWPDA--FSQYF 352
Query: 239 CMWDSFMAGVALSIMLNSSSHNGENACSEMEYMNLTVVTSNEPYGISDGSNPLIDGLEVP 298
+WDSF + +A+S MLN + +N ++ +T+VTSNEPYG+ DGSNPL +
Sbjct: 353 YLWDSFTSAIAISGMLNGHDAS-KNEFGTIDPALVTIVTSNEPYGVRDGSNPLFETKRWR 411
Query: 299 KFNVQKNGVHSGHVQTGMQDPFC-LESGKAKCQDG---YIKEVKGPEAVRVLVATKAKPS 354
KF ++K GVHSGHVQTG++DPFC + G+ C+DG K K V V V +AK S
Sbjct: 412 KFGLEKGGVHSGHVQTGLRDPFCYVPRGEGICKDGRTVITKNCKSGGGVLVQVVGRAKLS 471
Query: 355 QD------LGSLLEKEFYLSFLNALNFPQQAGRFNISTQFPYYEE-ILRKPDFGKKLM-- 405
+ +L+KEFY SF+NALN P Q+ RF Q P E R G K +
Sbjct: 472 YENDERTHTSKVLDKEFYSSFINALNSPHQSARFTFQRQTPSIRENQYRVNSSGPKRLGK 531
Query: 406 GKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRD 465
GK ++FD+DMS GD L L+YL LK I VS G+A +A++D VYD+L MMGRD
Sbjct: 532 GKALLFDMDMSPGDILTLVYL---------LKAITVSGNGFANAASIDTVYDVLDMMGRD 582
Query: 466 DIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTA 525
D+ VGLG +FA G+ G CKY +A+P G+ G LDSDTLYGLAR LPRSPRRY+
Sbjct: 583 DVSVGLGALFARGQAYSN--ATGDCKYRRAVPQGTSGLLDSDTLYGLARSLPRSPRRYSG 640
Query: 526 ENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGL---Q 582
+ ++ + +V + + +K+T++ GP+TNLA+ + Q
Sbjct: 641 RSQLQ---------------TSTEVITDALRGLGGSAKLTVVAGGPVTNLAEFLTATRNQ 685
Query: 583 NSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+I++VY++GG+ + GNVFTV + AEFNMFLDPLAA+ V S L + L+PL
Sbjct: 686 ALKDLIEEVYVLGGSISR---PGNVFTVEENSKAEFNMFLDPLAAEIVLCSGLRVTLLPL 742
Query: 643 HMQRRVASFFKILHKLRD--RKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGA 700
+ +V+ L+ LR R +TPES +LL+ + L+ + +Y H LGEV+ A
Sbjct: 743 DVTEKVSPEKAFLNHLRSRHRHRTPESCLVHKLLRTVHELKTKNPAYVHAANPLGEVMAA 802
Query: 701 VILGGNPHLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVLESLN 749
+ + L K ++ + + GD+S+ G V+ E G V+++E +N
Sbjct: 803 AVAVNSTALGVVSKEVAITVEATGDVSRDGWTRVD-EHGCTVRIVEKIN 850
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 103/328 (31%), Positives = 144/328 (43%), Gaps = 82/328 (25%)
Query: 407 KPVVFDIDMSAGDFLALIYLLKLPVELINLKG---------------------------- 438
K +V D D+ D LA++Y+LK LINLK
Sbjct: 38 KNLVLDTDLDVEDVLAILYILKQNRSLINLKASLSAHGFLSSCLAYHIDIILATCNAFDK 97
Query: 439 ----------ILVSSTGWATSA-TVDVVYDLLHMMGRDDIPVGLGDVFAV---GEVNPK- 483
I + S W V++VYDLL MGRDDIP+G+G + G + P
Sbjct: 98 EGGSFAALQAITLDSNAWVNPGFGVNMVYDLLFTMGRDDIPIGVGGEGGITQDGTIQPNV 157
Query: 484 --FPPI--------GGCKYAKAIPLGSG-GFLDSDTLYGL-ARDLPRSPRRYTAENSVRF 531
+ PI G C+Y +AIP G G G LD DT YGL ++ LP+ R Y N
Sbjct: 158 GGYVPIIDQMLYTCGSCRYRQAIPPGRGAGSLDVDTHYGLRSQFLPQGERHYIPGNQR-- 215
Query: 532 GASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQD 590
+SQ+ ++E++ GS T+L G TN A ++ IQ
Sbjct: 216 -SSQE----------------VLLEALSTGSN-TVLLTGSHTNFALLLMTHPEVKKNIQH 257
Query: 591 VYIVGGNKGQDNEKGNVFT-VPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVA 649
VYI+GG E GN+FT S+ AEFN+F DP A+ VF S L I L+PL V
Sbjct: 258 VYIMGG-----GESGNLFTGTESNPRAEFNIFADPFASYQVFHSGLAITLVPLEATDTVP 312
Query: 650 SFFKILHKLRDRKKTPESVFSQRLLQGL 677
+++ L + E+ ++ +L L
Sbjct: 313 VTQELITALERSMNSLEANYTYHMLSML 340
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 127/264 (48%), Gaps = 47/264 (17%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTA-GECRYRQAIPVGQR--LY 57
MM RDD+ VG+ G + G Q S A G+C+YR+A+P G L
Sbjct: 578 MMGRDDVSVGL---GALFARG--------------QAYSNATGDCKYRRAVPQGTSGLLD 620
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQ-PTAQQVLINAI----SAGPITVFVMGSHTNFAIFL 112
+T YGL ++ LP+ R+Y+ Q T+ +V+ +A+ + +TV G TN A FL
Sbjct: 621 SDTLYGLARS-LPRSPRRYSGRSQLQTSTEVITDALRGLGGSAKLTVVAGGPVTNLAEFL 679
Query: 113 --MNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSD 170
N LK IE +YV+GG+I GN++ + N AEFN+F D
Sbjct: 680 TATRNQALKDLIEEVYVLGGSISRP----------------GNVFTVEENSKAEFNMFLD 723
Query: 171 PFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCF--QSLKMIRDTW 228
P AA VL SG+ VT++PLD T+ + + F R + C + L+ + +
Sbjct: 724 PLAAEIVLCSGLRVTLLPLDVTEKVSPEKAFLNHLRSRHRHRTPESCLVHKLLRTVHELK 783
Query: 229 SGSPPF-HEAYCMWDSFMAGVALS 251
+ +P + H A + + A VA++
Sbjct: 784 TKNPAYVHAANPLGEVMAAAVAVN 807
>gi|224100285|ref|XP_002311815.1| predicted protein [Populus trichocarpa]
gi|222851635|gb|EEE89182.1| predicted protein [Populus trichocarpa]
Length = 414
Score = 567 bits (1460), Expect = e-158, Method: Compositional matrix adjust.
Identities = 270/406 (66%), Positives = 322/406 (79%), Gaps = 19/406 (4%)
Query: 71 QGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGG 130
G RKY+PL QPTAQQVL ISAGPITV + G+HTN +FLMNNPHLK NIEHIY MGG
Sbjct: 14 NGSRKYSPLEQPTAQQVLTEKISAGPITVLITGAHTNIGVFLMNNPHLKNNIEHIYAMGG 73
Query: 131 AIRSDCFNSTNSSQSEQCDSIGNLYPD-DSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPL 189
A+RSD GNL+ D SNPYAEFNIF+DPFAAY VLHSGIP+T++PL
Sbjct: 74 AVRSD----------------GNLFADLYSNPYAEFNIFADPFAAYQVLHSGIPLTLVPL 117
Query: 190 DATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPFHEAYCMWDSFMAGVA 249
DAT TIP +ENFF FE+ Q+TYEAQYCF+SLKM RDT + F+ ++ MWD+F AGVA
Sbjct: 118 DATNTIPTNENFFKAFEQNQHTYEAQYCFRSLKMTRDTRTDDH-FYTSHYMWDTFAAGVA 176
Query: 250 LSIMLNSSSHNGENACSEMEYMNLTVVTSNEPYGISDGSNPLIDGLEVPKFNVQKNGVHS 309
+S M NS + +GEN +EMEYMN+TVVTSNEP+GISD SNP EVP+FN+ K GVHS
Sbjct: 177 VSTMRNSQNRDGENEFAEMEYMNITVVTSNEPFGISDSSNPFFYHREVPRFNLTKGGVHS 236
Query: 310 GHVQTGMQDPFCL-ESGKAKCQDGYIKEVKGPEAVRVLVATKAKPSQDLGSLLEKEFYLS 368
GHVQTG++DP CL E+GK +C+DGY KEV G EAVRVLVAT+AKP+ D S L++ FY S
Sbjct: 237 GHVQTGLRDPLCLGENGKGRCEDGYTKEVSGAEAVRVLVATRAKPNPDRNSTLDRAFYKS 296
Query: 369 FLNALNFPQQAGRFNISTQFPYYEEILRKPDFGKKLMGKPVVFDIDMSAGDFLALIYLLK 428
FL+ LN PQQ+GRFN +TQFP+Y+E+L +PDFG K +GKPVVFD+DMS GDFLAL YLLK
Sbjct: 297 FLDVLNDPQQSGRFNFTTQFPHYKEVLYRPDFGTKGLGKPVVFDMDMSVGDFLALFYLLK 356
Query: 429 LPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIPVGLGDV 474
+PVE IN+KGI+VS TGWA +AT+D+VYD LHMMGRDDIPVGLGD+
Sbjct: 357 VPVEEINVKGIIVSPTGWANAATIDIVYDFLHMMGRDDIPVGLGDM 402
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 76/163 (46%), Gaps = 16/163 (9%)
Query: 542 LRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSV---IQDVYIVGGNK 598
L QP A V + E I G IT+L G TN+ + L N+ + I+ +Y +GG
Sbjct: 22 LEQPTAQQV---LTEKISAGP-ITVLITGAHTNIG--VFLMNNPHLKNNIEHIYAMGGAV 75
Query: 599 GQDNEKGNVFT-VPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHK 657
D GN+F + S+ YAEFN+F DP AA V S + + L+PL + +
Sbjct: 76 RSD---GNLFADLYSNPYAEFNIFADPFAAYQVLHSGIPLTLVPLDATNTIPTNENFFKA 132
Query: 658 LRDRKKTPESVFSQRLLQGLMTLQQSHHSY--HHV-DTFLGEV 697
+ T E+ + R L+ + H Y H++ DTF V
Sbjct: 133 FEQNQHTYEAQYCFRSLKMTRDTRTDDHFYTSHYMWDTFAAGV 175
>gi|125552305|gb|EAY98014.1| hypothetical protein OsI_19927 [Oryza sativa Indica Group]
Length = 819
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 281/483 (58%), Positives = 345/483 (71%), Gaps = 11/483 (2%)
Query: 306 GVHSGHVQTGMQDPFCL--ESGKAKCQDGYIKEVKGPEAVRVLVATKAKPSQDLGSLLEK 363
GVHSGHVQTG+ D FCL ES K +C+DGY KE GPEAVRV VATKAK + D SLL++
Sbjct: 339 GVHSGHVQTGITDSFCLAKESKKGRCEDGYTKEESGPEAVRVCVATKAKVNVDKSSLLDR 398
Query: 364 EFYLSFLNALNFPQQAGRFNISTQFPYYEEILRKPDFGKKLMGKPVVFDIDMSAGDFLAL 423
EF+ SFL LN P+ G FNI+ QFP+Y E+L +PDF K GKPV+FD+DMS GDF++L
Sbjct: 399 EFFKSFLETLNLPENTGLFNITAQFPFYREVLYRPDFTNKSRGKPVIFDMDMSPGDFISL 458
Query: 424 IYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIPVGLGDVFAVGEVNPK 483
IYLLK+P ELI+LKGILVS GWA A++D+VYD+LHMMGRDDIPVG G A+G +
Sbjct: 459 IYLLKVPTELIDLKGILVSGNGWANVASIDIVYDILHMMGRDDIPVGRGSTSALGTESL- 517
Query: 484 FPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENSVRFGASQDNDDPELR 543
GCKY AIP GSGG LDSDTLYGLAR LPRSPRRYTAENSV++GA +D D PELR
Sbjct: 518 -----GCKYVSAIPQGSGGLLDSDTLYGLARSLPRSPRRYTAENSVKYGAPRDTDHPELR 572
Query: 544 QPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQII-GLQNSSSVIQDVYIVGGNKGQD- 601
QPLA +VW+ + ++P KITILTNGPLTNLA I+ +N+SSVI+ VY+VGG+ D
Sbjct: 573 QPLAFEVWQFVKHQLDPNEKITILTNGPLTNLANIVLSDRNASSVIKSVYVVGGHIRDDS 632
Query: 602 NEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDR 661
N KGNVF+VPS+ YAEFN+FLDPLAAK V +S L+I LIPL QR+ ASF +L L+
Sbjct: 633 NTKGNVFSVPSNTYAEFNIFLDPLAAKTVLDSTLDITLIPLRAQRKAASFHALLEALK-H 691
Query: 662 KKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKSLEII 721
+TPES F LL L LQQ H YHH+D FLGE+LGAV L ++ Q+ + K + I+
Sbjct: 692 AETPESRFVHHLLTLLHDLQQKHQLYHHMDMFLGELLGAVSLVEGSNIKQSLQRKPISIV 751
Query: 722 SDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEVLGDHKQSAVIGSFYDQEKTWN 781
++ S GQ +V+ + LVKVL N YY A LGD ++SAVI F +Q W+
Sbjct: 752 ANSTTSIDGQTVVDNQSANLVKVLLDFNSEEYYKRVANSLGDKERSAVISGFAEQRAIWS 811
Query: 782 TPP 784
PP
Sbjct: 812 NPP 814
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 155/237 (65%), Positives = 185/237 (78%), Gaps = 9/237 (3%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPV--GQRLYV 58
MM RDDIPVGVGG+GGI +GTI P+VGGY P+IDQGM+T G CRYRQAIP+ G RL +
Sbjct: 94 MMGRDDIPVGVGGDGGISGHGTIHPNVGGYLPLIDQGMTTFGPCRYRQAIPLEGGGRLDI 153
Query: 59 NTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHL 118
+TN G+RK FLPQG R+Y PL Q TAQQVLI ISAGP TV ++GSHTNFAIFLM +PHL
Sbjct: 154 DTNSGIRKGFLPQGNRRYIPLHQSTAQQVLIETISAGPTTVMLIGSHTNFAIFLMTHPHL 213
Query: 119 KKNIEHIYVMGGAIR----SDCF--NSTNSSQSEQCDSIGNLYPD-DSNPYAEFNIFSDP 171
KKN+EHIY+MGG +R + C NST S +QC GNL+ +NP AEFN+F+DP
Sbjct: 214 KKNVEHIYIMGGGVRLENPTGCCPKNSTTSCTPQQCGDHGNLFTSYRTNPNAEFNMFADP 273
Query: 172 FAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTW 228
FAAY V HSGI +T++PLDAT TIPV+E FF F+++Q+TYEAQYCF SLKM RDTW
Sbjct: 274 FAAYQVFHSGIAITLVPLDATNTIPVNEEFFHAFQQQQSTYEAQYCFDSLKMARDTW 330
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 119/270 (44%), Gaps = 57/270 (21%)
Query: 437 KGILVSSTGWATSA-TVDVVYDLLHMMGRDDIPVGLGDVFAVGEVNPKFPPIGG------ 489
+ + + W + V+ +YD+L+MMGRDDIPVG+G + P +GG
Sbjct: 69 QAVTIDVNAWTDAGHAVNHLYDMLYMMGRDDIPVGVGGDGGISGHGTIHPNVGGYLPLID 128
Query: 490 --------CKYAKAIPLGSGGFLDSDTLYGLARD-LPRSPRRYTAENSVRFGASQDNDDP 540
C+Y +AIPL GG LD DT G+ + LP+ RRY
Sbjct: 129 QGMTTFGPCRYRQAIPLEGGGRLDIDTNSGIRKGFLPQGNRRYIP--------------- 173
Query: 541 ELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKG 599
L Q A V ++E+I G T++ G TN A + + ++ +YI+GG
Sbjct: 174 -LHQSTAQQV---LIETISAG-PTTVMLIGSHTNFAIFLMTHPHLKKNVEHIYIMGGGVR 228
Query: 600 QDN-------------------EKGNVFT-VPSSKYAEFNMFLDPLAAKAVFESKLEIKL 639
+N + GN+FT ++ AEFNMF DP AA VF S + I L
Sbjct: 229 LENPTGCCPKNSTTSCTPQQCGDHGNLFTSYRTNPNAEFNMFADPFAAYQVFHSGIAITL 288
Query: 640 IPLHMQRRVASFFKILHKLRDRKKTPESVF 669
+PL + + H + ++ T E+ +
Sbjct: 289 VPLDATNTIPVNEEFFHAFQQQQSTYEAQY 318
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 109/238 (45%), Gaps = 56/238 (23%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQ--RLYV 58
MM RDDIPVG G + G + G C+Y AIP G L
Sbjct: 496 MMGRDDIPVGRGSTSAL-------------------GTESLG-CKYVSAIPQGSGGLLDS 535
Query: 59 NTNYGLRKAFLPQGGRKY---------AP-------LRQPTA----QQVLINAISAGPIT 98
+T YGL ++ LP+ R+Y AP LRQP A Q V IT
Sbjct: 536 DTLYGLARS-LPRSPRRYTAENSVKYGAPRDTDHPELRQPLAFEVWQFVKHQLDPNEKIT 594
Query: 99 VFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDD 158
+ G TN A ++++ + I+ +YV+GG IR D ++ GN++
Sbjct: 595 ILTNGPLTNLANIVLSDRNASSVIKSVYVVGGHIRDDS------------NTKGNVFSVP 642
Query: 159 SNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQY 216
SN YAEFNIF DP AA TVL S + +T+IPL A + S + +E + T E+++
Sbjct: 643 SNTYAEFNIFLDPLAAKTVLDSTLDITLIPLRAQRK-AASFHALLEALKHAETPESRF 699
>gi|147852558|emb|CAN82749.1| hypothetical protein VITISV_037091 [Vitis vinifera]
Length = 367
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 252/370 (68%), Positives = 297/370 (80%), Gaps = 6/370 (1%)
Query: 69 LPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVM 128
+ QG R Y+PL QPTAQQV+INA+SAGPITVF++G+HTNFAIFLM NP LKKNIEHIYVM
Sbjct: 1 MKQGSRGYSPLEQPTAQQVMINAVSAGPITVFLLGTHTNFAIFLMTNPQLKKNIEHIYVM 60
Query: 129 GGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIP 188
GG+I C N+S+ E+C +IGNL+P D NPYAEFN F DPFAAY VLHSGIPVT+IP
Sbjct: 61 GGSIWPHC-PKKNNSRPEECGNIGNLFPGDDNPYAEFNFFEDPFAAYEVLHSGIPVTLIP 119
Query: 189 LDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPFHEAYCMWDSFMAGV 248
LDAT TIP++ENFF FE++QNTYEAQY F+++KM DTW + FHE MWD FM GV
Sbjct: 120 LDATNTIPITENFFKAFEQKQNTYEAQYSFKAMKMAHDTWFNNH-FHENVFMWDYFMVGV 178
Query: 249 ALSIMLNSSSHNGENACSEMEYMNLTVVTSNEPYGISDGSNPLIDGLEVPKFNVQKNGVH 308
ALSIM NS++ NGEN + MEY N+TVVTSNEPYGISDGSNP DG KF KNGVH
Sbjct: 179 ALSIMRNSANDNGENEFAVMEYTNITVVTSNEPYGISDGSNPFNDGSTTSKF---KNGVH 235
Query: 309 SGHVQTGMQDPFCLESG-KAKCQDGYIKEVKGPEAVRVLVATKAKPSQDLGSLLEKEFYL 367
SGHVQTG +DPFCLE K +C+DGY EV GP++VRVLVAT+AK +QD SLL++EFY
Sbjct: 236 SGHVQTGNRDPFCLEKNQKGRCKDGYTMEVTGPDSVRVLVATEAKRNQDANSLLDREFYK 295
Query: 368 SFLNALNFPQQAGRFNISTQFPYYEEILRKPDFGKKLMGKPVVFDIDMSAGDFLALIYLL 427
SFL+ ++ PQQ+GRFNISTQFPYY EI+ KPDFG + GKP VFD+DMS GD +AL+YLL
Sbjct: 296 SFLDVISRPQQSGRFNISTQFPYYGEIVYKPDFGTRKKGKPFVFDMDMSTGDLIALLYLL 355
Query: 428 KLPVELINLK 437
KLPVE I+LK
Sbjct: 356 KLPVEQIDLK 365
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 74/171 (43%), Gaps = 21/171 (12%)
Query: 542 LRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS--SSVIQDVYIVGG--- 596
L QP A V ++ ++ G IT+ G TN A I + N I+ +Y++GG
Sbjct: 11 LEQPTAQQV---MINAVSAGP-ITVFLLGTHTNFA-IFLMTNPQLKKNIEHIYVMGGSIW 65
Query: 597 ------NKGQDNEKGNV---FTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
N + E GN+ F + YAEFN F DP AA V S + + LIPL
Sbjct: 66 PHCPKKNNSRPEECGNIGNLFPGDDNPYAEFNFFEDPFAAYEVLHSGIPVTLIPLDATNT 125
Query: 648 VASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVL 698
+ ++ T E+ +S + ++ M +++ H + F+ +
Sbjct: 126 IPITENFFKAFEQKQNTYEAQYSFKAMK--MAHDTWFNNHFHENVFMWDYF 174
>gi|357447545|ref|XP_003594048.1| Pyrimidine-specific ribonucleoside hydrolase rihA [Medicago
truncatula]
gi|355483096|gb|AES64299.1| Pyrimidine-specific ribonucleoside hydrolase rihA [Medicago
truncatula]
Length = 565
Score = 394 bits (1012), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/349 (53%), Positives = 266/349 (76%), Gaps = 19/349 (5%)
Query: 438 GILVSSTGWATSATVDVVYDLLHMMGRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIP 497
I+VS TGWA +AT+DV+YDLLHMMGRDDI VG+GD Y KAIP
Sbjct: 229 AIIVSPTGWANAATIDVIYDLLHMMGRDDIKVGIGDFL----------------YVKAIP 272
Query: 498 LGSGGFLDSDTLYGLARDLPRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVES 557
G+GGFLDSDTL+G ARDLP SPRRYTAEN+V+FGA +D D PELRQP +++W+S++++
Sbjct: 273 HGNGGFLDSDTLFGFARDLPHSPRRYTAENTVKFGALRDTDHPELRQPRVMEIWESLLQT 332
Query: 558 IEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQD-NEKGNVFTVPSSKYA 616
++PGSKIT+LTNGPLTNLA+++ ++N SS IQ+VY+VGG+ + N+KGNVF+VPS+KYA
Sbjct: 333 LKPGSKITVLTNGPLTNLAKVVSVKNISSRIQEVYVVGGHISRSANDKGNVFSVPSNKYA 392
Query: 617 EFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQG 676
EFNMFLDPLAAKAVF+S++ I IPL +Q++ +SF L L +KTPE+VFS+R+L
Sbjct: 393 EFNMFLDPLAAKAVFQSEVNITFIPLSIQQKASSFSSTLRWLSQIEKTPETVFSKRILSR 452
Query: 677 LMTLQQSHHSYHHVDTFLGEVLGAVIL--GGNPHLNQTYKIKSLEIISDGDISKVGQIIV 734
L L++ HH Y H+DTFLGE+LGAV+L G + L+ +++KS++++++G S G+++V
Sbjct: 453 LRRLKKIHHRYQHMDTFLGEILGAVVLANGHSSLLDAKFELKSVKLLAEGIESTDGKMVV 512
Query: 735 NQEQGKLVKVLESLNVAVYYDHFAEVLGDHKQSAVIGSFYDQEKTWNTP 783
+++ GKLV++L ++ Y++ +A+ LGD QSA +GSF +Q++ W+ P
Sbjct: 513 DEKYGKLVRILRHVDAKTYHEIYAKRLGDPNQSAKVGSFKEQKRKWSHP 561
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 85/132 (64%), Positives = 97/132 (73%), Gaps = 25/132 (18%)
Query: 1 MMNRDDIPVGVGGEGGILPNGT-----------------------ILPDVGGYQPIIDQG 37
MM RDDI VGVGGEGGILPNGT ILP+VGGY PII+QG
Sbjct: 74 MMGRDDIAVGVGGEGGILPNGTNGASLRGCKQLKRSRASEFSGTAILPNVGGYLPIIEQG 133
Query: 38 MSTAGECRYRQAIPVG--QRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAG 95
M+TAG+CRYRQAIPVG RL ++TNYG+RKAFLP+G RKY PLRQPTAQQVLI+ ISAG
Sbjct: 134 MTTAGDCRYRQAIPVGFGGRLDIDTNYGIRKAFLPRGKRKYTPLRQPTAQQVLIDKISAG 193
Query: 96 PITVFVMGSHTN 107
PIT+ +G+HTN
Sbjct: 194 PITLIAIGTHTN 205
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 119/294 (40%), Gaps = 68/294 (23%)
Query: 1 MMNRDDIPVGVG----------GEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAI 50
MM RDDI VG+G G GG L + T+ + + +
Sbjct: 252 MMGRDDIKVGIGDFLYVKAIPHGNGGFLDSDTLFG--------------------FARDL 291
Query: 51 PVGQRLYVNTNY----GLRKAFLPQGGRKYAPLRQPTAQQV---LINAISAG-PITVFVM 102
P R Y N LR P+ LRQP ++ L+ + G ITV
Sbjct: 292 PHSPRRYTAENTVKFGALRDTDHPE-------LRQPRVMEIWESLLQTLKPGSKITVLTN 344
Query: 103 GSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPY 162
G TN A +++ ++ I+ +YV+GG I S + GN++ SN Y
Sbjct: 345 GPLTNLAK-VVSVKNISSRIQEVYVVGGHI------------SRSANDKGNVFSVPSNKY 391
Query: 163 AEFNIFSDPFAAYTVLHSGIPVTIIPLD---ATKTIPVSENFFVEFERRQNTYEAQYCFQ 219
AEFN+F DP AA V S + +T IPL + + + + E+ T ++
Sbjct: 392 AEFNMFLDPLAAKAVFQSEVNITFIPLSIQQKASSFSSTLRWLSQIEKTPETVFSKRILS 451
Query: 220 SLKMIRDTWSGSPPFHEAYCMWDSFMAGVALSIMLNSSSHNGENACSEMEYMNL 273
L+ ++ H Y D+F+ + +++L + + +A E++ + L
Sbjct: 452 RLRRLKK-------IHHRYQHMDTFLGEILGAVVLANGHSSLLDAKFELKSVKL 498
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 80/178 (44%), Gaps = 59/178 (33%)
Query: 436 LKGILVSSTGWATSA-TVDVVYDLLHMMGRDDIPVGLG---------------------- 472
L+G+ +S+ W + V+ VYD+L+MMGRDDI VG+G
Sbjct: 48 LEGVTLSANAWTNAGHAVNQVYDILYMMGRDDIAVGVGGEGGILPNGTNGASLRGCKQLK 107
Query: 473 ----DVFAVGEVNPK---FPPI--------GGCKYAKAIPLGSGGFLDSDTLYGLARD-L 516
F+ + P + PI G C+Y +AIP+G GG LD DT YG+ + L
Sbjct: 108 RSRASEFSGTAILPNVGGYLPIIEQGMTTAGDCRYRQAIPVGFGGRLDIDTNYGIRKAFL 167
Query: 517 PRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTN 574
PR R+YT LRQP A V +++ I G IT++ G TN
Sbjct: 168 PRGKRKYTP----------------LRQPTAQQV---LIDKISAGP-ITLIAIGTHTN 205
>gi|15239588|ref|NP_197388.1| Inosine-uridine preferring nucleoside hydrolase family protein
[Arabidopsis thaliana]
gi|332005240|gb|AED92623.1| Inosine-uridine preferring nucleoside hydrolase family protein
[Arabidopsis thaliana]
Length = 258
Score = 236 bits (602), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 139/179 (77%), Gaps = 11/179 (6%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQRLYVNT 60
MM RDDI VGVGGEGGIL +GTILPDVG Y PII+QGM+TAG CRYRQ+IP G+ +++
Sbjct: 84 MMGRDDITVGVGGEGGILEDGTILPDVGDYLPIIEQGMTTAGGCRYRQSIPKGRIQKIDS 143
Query: 61 NYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKK 120
NYG RK FLPQG R+Y PL QPTAQ+V+++ +S GPI++FV+GSHTN A+F+M+NPHLK
Sbjct: 144 NYGFRKHFLPQGNRRYTPLEQPTAQKVIVDKVSEGPISIFVIGSHTNLALFMMSNPHLKH 203
Query: 121 NIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPD-DSNPYAEFNIFSDPFAAYTVL 178
NI+HIYVMGG++R C N GNL+ D SNPYAEFNIF+DPFAAY V
Sbjct: 204 NIQHIYVMGGSVR--CQNPNGFC--------GNLFTDYTSNPYAEFNIFTDPFAAYQVF 252
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/234 (36%), Positives = 120/234 (51%), Gaps = 43/234 (18%)
Query: 420 FLALIYLLKLPVELINLKGILVSSTGWATSAT-VDVVYDLLHMMGRDDIPVGL---GDVF 475
F+AL+YLLKL +L GI +S+ W + V+ +YD+L+MMGRDDI VG+ G +
Sbjct: 42 FIALLYLLKLNKTEFDLVGITLSANSWTNAGHGVNHIYDILYMMGRDDITVGVGGEGGIL 101
Query: 476 AVGEVNP---KFPPI--------GGCKYAKAIPLGSGGFLDSDTLYGLARD-LPRSPRRY 523
G + P + PI GGC+Y ++IP G +DS+ YG + LP+ RRY
Sbjct: 102 EDGTILPDVGDYLPIIEQGMTTAGGCRYRQSIPKGRIQKIDSN--YGFRKHFLPQGNRRY 159
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQ-IIGLQ 582
T L QP A K IV+ + G I+I G TNLA ++
Sbjct: 160 TP----------------LEQPTA---QKVIVDKVSEG-PISIFVIGSHTNLALFMMSNP 199
Query: 583 NSSSVIQDVYIVGGNKGQDNEK---GNVFT-VPSSKYAEFNMFLDPLAAKAVFE 632
+ IQ +Y++GG+ N GN+FT S+ YAEFN+F DP AA VF
Sbjct: 200 HLKHNIQHIYVMGGSVRCQNPNGFCGNLFTDYTSNPYAEFNIFTDPFAAYQVFR 253
>gi|297807929|ref|XP_002871848.1| hypothetical protein ARALYDRAFT_488773 [Arabidopsis lyrata subsp.
lyrata]
gi|297317685|gb|EFH48107.1| hypothetical protein ARALYDRAFT_488773 [Arabidopsis lyrata subsp.
lyrata]
Length = 251
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 113/179 (63%), Positives = 138/179 (77%), Gaps = 15/179 (8%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQRLYVNT 60
MM RDDIPVG+GGEGGIL +GTILPDVGGY PII+QGM+TAG CRYRQ+IP G +++
Sbjct: 81 MMGRDDIPVGIGGEGGILDDGTILPDVGGYLPIIEQGMTTAGGCRYRQSIPKG----LDS 136
Query: 61 NYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKK 120
NYG RK FLP G R+Y PL QPTAQ+V+ + +S GPI++FV+GSHTN A+F+M+ P+LK
Sbjct: 137 NYGFRKHFLPLGNRRYTPLEQPTAQKVIFDKVSQGPISIFVIGSHTNLALFMMSTPYLKH 196
Query: 121 NIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPD-DSNPYAEFNIFSDPFAAYTVL 178
NI+HIYVMGG++R C N T GNL+ D SNPYAEFNIF+DPFAAY V
Sbjct: 197 NIQHIYVMGGSVR--CPNPTGFC--------GNLFTDFTSNPYAEFNIFTDPFAAYQVF 245
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/234 (37%), Positives = 118/234 (50%), Gaps = 47/234 (20%)
Query: 420 FLALIYLLKLPVELINLKGILVSSTGWATSAT-VDVVYDLLHMMGRDDIPVGL---GDVF 475
F+AL+YLLKL +L GI +S+ W + V+ +YD+L+MMGRDDIPVG+ G +
Sbjct: 39 FIALLYLLKLNKTEFDLVGITLSANAWTNAGHGVNHIYDILYMMGRDDIPVGIGGEGGIL 98
Query: 476 AVGEVNPK---FPPI--------GGCKYAKAIPLGSGGFLDSDTLYGLARD-LPRSPRRY 523
G + P + PI GGC+Y ++IP G LDS+ YG + LP RRY
Sbjct: 99 DDGTILPDVGGYLPIIEQGMTTAGGCRYRQSIPKG----LDSN--YGFRKHFLPLGNRRY 152
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQ-IIGLQ 582
T L QP A K I + + G I+I G TNLA ++
Sbjct: 153 T----------------PLEQPTA---QKVIFDKVSQG-PISIFVIGSHTNLALFMMSTP 192
Query: 583 NSSSVIQDVYIVGGNKGQDNEK---GNVFT-VPSSKYAEFNMFLDPLAAKAVFE 632
IQ +Y++GG+ N GN+FT S+ YAEFN+F DP AA VF
Sbjct: 193 YLKHNIQHIYVMGGSVRCPNPTGFCGNLFTDFTSNPYAEFNIFTDPFAAYQVFR 246
>gi|224144490|ref|XP_002336153.1| predicted protein [Populus trichocarpa]
gi|222874439|gb|EEF11570.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 109/200 (54%), Positives = 147/200 (73%), Gaps = 3/200 (1%)
Query: 589 QDVYIVGGNKGQ-DNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
QDVY+VGG+ D +KGNV T+ S++Y E NMFLDPLAAK VFES L+I LIPL +QRR
Sbjct: 4 QDVYVVGGHISHSDTDKGNVLTIDSNEYTELNMFLDPLAAKTVFESSLDITLIPLGVQRR 63
Query: 648 VASFFKILHKLRDR-KKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGGN 706
V+SF KIL LR + K+TPE +F +RLL L L+++HH YHH+DTFLGE+LGAV+L G+
Sbjct: 64 VSSFPKILRSLRSKTKRTPEELFVRRLLSRLYRLKETHHRYHHMDTFLGEILGAVVLAGD 123
Query: 707 -PHLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEVLGDHK 765
L + K + I+++GD SK GQ++++++QGK VK+LES+ +YD FA+ L K
Sbjct: 124 HSKLEPIWLAKPITILAEGDESKDGQVVIDEKQGKFVKILESVEPEAHYDLFAKQLTVKK 183
Query: 766 QSAVIGSFYDQEKTWNTPPN 785
QSAV+GSF +Q + W PPN
Sbjct: 184 QSAVVGSFGEQRRIWGAPPN 203
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 12/71 (16%)
Query: 125 IYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPV 184
+YV+GG I S GN+ DSN Y E N+F DP AA TV S + +
Sbjct: 6 VYVVGGHI------------SHSDTDKGNVLTIDSNEYTELNMFLDPLAAKTVFESSLDI 53
Query: 185 TIIPLDATKTI 195
T+IPL + +
Sbjct: 54 TLIPLGVQRRV 64
>gi|50878313|gb|AAT85088.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 286
Score = 183 bits (464), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 101/184 (54%), Positives = 129/184 (70%), Gaps = 17/184 (9%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTIL-PDVGGYQPIIDQGMSTAGECRYRQAIPVGQ--RLY 57
MM RDDIPVGVGG+GG+ +G + PDVGGY P+IDQG STAG CRYRQA+P G+ RL
Sbjct: 115 MMGRDDIPVGVGGDGGVSDSGALRGPDVGGYLPLIDQGTSTAGGCRYRQAVPAGRGGRLD 174
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPH 117
V+TN G+R+ FLPQG R+Y P+ QPTAQ+V+ + +S GP TV + G+HTN A+ LM +P
Sbjct: 175 VDTNSGVRRGFLPQGRRRYRPVTQPTAQRVMADTVSGGPTTVLLFGAHTNLALLLMAHPR 234
Query: 118 LKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPD-DSNPYAEFNIFSDPFAAYT 176
L +NI+ +YV GGA+R+ D GNL+ +NP+AEFNIF DPFAAY
Sbjct: 235 LARNIDRVYVSGGAVRA-------------ADPAGNLFTAFATNPFAEFNIFGDPFAAYQ 281
Query: 177 VLHS 180
V S
Sbjct: 282 VFRS 285
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/246 (35%), Positives = 120/246 (48%), Gaps = 39/246 (15%)
Query: 407 KPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSA-TVDVVYDLLHMMGRD 465
+ ++ D DM D AL+YLLK ++K I +++ W+ + V+ +YDLLHMMGRD
Sbjct: 60 RRILVDTDMDTDDLFALLYLLKQNRSEFDVKAITINANEWSDAGHAVNHLYDLLHMMGRD 119
Query: 466 DIPVGLGDVFAVG--------EVNPKFPPI-------GGCKYAKAIPLGSGGFLDSDTLY 510
DIPVG+G V +V P I GGC+Y +A+P G GG LD DT
Sbjct: 120 DIPVGVGGDGGVSDSGALRGPDVGGYLPLIDQGTSTAGGCRYRQAVPAGRGGRLDVDTNS 179
Query: 511 GLARD-LPRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTN 569
G+ R LP+ RRY + QP A V V G T+L
Sbjct: 180 GVRRGFLPQGRRRYR----------------PVTQPTAQRVMADTVS----GGPTTVLLF 219
Query: 570 GPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEKGNVFTV-PSSKYAEFNMFLDPLAA 627
G TNLA ++ + I VY+ GG + GN+FT ++ +AEFN+F DP AA
Sbjct: 220 GAHTNLALLLMAHPRLARNIDRVYVSGGAVRAADPAGNLFTAFATNPFAEFNIFGDPFAA 279
Query: 628 KAVFES 633
VF S
Sbjct: 280 YQVFRS 285
>gi|440791831|gb|ELR13069.1| inosineuridine preferring nucleoside hydrolase family protein
[Acanthamoeba castellanii str. Neff]
Length = 380
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 163/341 (47%), Gaps = 30/341 (8%)
Query: 407 KPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWAT-SATVDVVYDLLHMMGRD 465
K V+ D D + D +A+++LLK I++K I V TGWA+ S+ + ++++L MGR+
Sbjct: 29 KQVIIDTDANTDDAIAILWLLKR--TDIDIKAITVVGTGWASLSSGLTNIFNMLAFMGRN 86
Query: 466 DIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRS-PRRYT 524
DIPV G +A+ ++ I GC YAK IP GG +DTL GLA P++ P RY
Sbjct: 87 DIPVTWGGGYALYDIKHN---IYGCTYAKTIPNAPGGRQWADTLVGLAHCFPKAGPGRYY 143
Query: 525 AENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS 584
N+ P AVD+ ++ S K+ IL GP TN+A ++
Sbjct: 144 NPNA----------------PGAVDLMVQVLNSTR--DKVDILALGPATNVADLLSAHPW 185
Query: 585 SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHM 644
+ V + G G GN+FT + YAE+N DP A AV S + + L+PL
Sbjct: 186 AKVRIGRVVFSG--GAVYVGGNIFTNVPNTYAEYNALGDPDALAAVATSGVSLVLVPLDA 243
Query: 645 QRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILG 704
++ L +L + T E+ + LL+ TLQ S + + AV++
Sbjct: 244 TGQLIVNQTYLDRLGVNQYTSEAAWVYSLLR---TLQTQMGSVFNTYSLWDPYAAAVLVD 300
Query: 705 GNPHLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVL 745
+ + + KIK + D + S+VG+ + G V V+
Sbjct: 301 QSRYADTVNKIKITVVTQDLNASEVGRTKPDSRNGSSVSVV 341
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 109/252 (43%), Gaps = 42/252 (16%)
Query: 2 MNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPV--GQRLYVN 59
M R+DIPV GG GY + D + G C Y + IP G R + +
Sbjct: 83 MGRNDIPVTWGG---------------GYA-LYDIKHNIYG-CTYAKTIPNAPGGRQWAD 125
Query: 60 TNYGLRKAFLPQG-GRKYAPLRQPTAQQVLINAISA--GPITVFVMGSHTNFAIFLMNNP 116
T GL F G GR Y P P A +++ +++ + + +G TN A L +P
Sbjct: 126 TLVGLAHCFPKAGPGRYYNP-NAPGAVDLMVQVLNSTRDKVDILALGPATNVADLLSAHP 184
Query: 117 HLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYT 176
K I + GGA+ GN++ + N YAE+N DP A
Sbjct: 185 WAKVRIGRVVFSGGAVYVG----------------GNIFTNVPNTYAEYNALGDPDALAA 228
Query: 177 VLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPFHE 236
V SG+ + ++PLDAT + V++ + Q T EA + + L+ ++ T GS
Sbjct: 229 VATSGVSLVLVPLDATGQLIVNQTYLDRLGVNQYTSEAAWVYSLLRTLQ-TQMGS--VFN 285
Query: 237 AYCMWDSFMAGV 248
Y +WD + A V
Sbjct: 286 TYSLWDPYAAAV 297
>gi|224166042|ref|XP_002338880.1| predicted protein [Populus trichocarpa]
gi|222873821|gb|EEF10952.1| predicted protein [Populus trichocarpa]
Length = 92
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 73/91 (80%), Gaps = 1/91 (1%)
Query: 245 MAGVALSIMLNSSSHNGENACSEMEYMNLTVVTSNEPYGISDGSNPLIDGLEVPKFNVQK 304
M+GVA+S M S + NGEN +EMEYMN+TVVTSNEPYG +D NPL DG +VPKFN++K
Sbjct: 1 MSGVAVSTMRTSHNQNGENEFAEMEYMNITVVTSNEPYGRNDCPNPLFDGRKVPKFNLKK 60
Query: 305 NGVHSGHVQTGMQDPFC-LESGKAKCQDGYI 334
GVHSGHVQTG+QDPFC +++GK KC+ +
Sbjct: 61 GGVHSGHVQTGLQDPFCVVQNGKGKCKANHF 91
>gi|357436299|ref|XP_003588425.1| hypothetical protein MTR_1g007110 [Medicago truncatula]
gi|355477473|gb|AES58676.1| hypothetical protein MTR_1g007110 [Medicago truncatula]
Length = 109
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/123 (46%), Positives = 86/123 (69%), Gaps = 16/123 (13%)
Query: 548 VDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQD-NEKGN 606
+++W+ ++++ +P SKIT+LTNGPLTNL VY++GG+ + N+KGN
Sbjct: 1 MEIWEFLLQTSKPESKITVLTNGPLTNLV--------------VYVMGGHISRSGNDKGN 46
Query: 607 VFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPE 666
VF+VPS+KYAEFNMF PLA K +F+S++ I L+PL +QR+ +SF L+ L +KTPE
Sbjct: 47 VFSVPSNKYAEFNMFY-PLATKTLFQSEVNITLVPLGIQRKASSFSSTLNWLSRTEKTPE 105
Query: 667 SVF 669
+V+
Sbjct: 106 AVY 108
Score = 43.5 bits (101), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 13/93 (13%)
Query: 125 IYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPV 184
+YVMGG I S + GN++ SN YAEFN+F P A T+ S + +
Sbjct: 30 VYVMGGHI------------SRSGNDKGNVFSVPSNKYAEFNMFY-PLATKTLFQSEVNI 76
Query: 185 TIIPLDATKTIPVSENFFVEFERRQNTYEAQYC 217
T++PL + + R + T EA Y
Sbjct: 77 TLVPLGIQRKASSFSSTLNWLSRTEKTPEAVYI 109
>gi|224125394|ref|XP_002319575.1| predicted protein [Populus trichocarpa]
gi|222857951|gb|EEE95498.1| predicted protein [Populus trichocarpa]
Length = 110
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 79/143 (55%), Gaps = 35/143 (24%)
Query: 413 IDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIPVGLG 472
+DM +FLAL+Y L PVEL LK L+ TGW TS VDV++D+ HMMG
Sbjct: 1 MDMKFKNFLALLYPLMFPVELNKLKVKLIIFTGWETSEIVDVIHDIKHMMG--------- 51
Query: 473 DVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENSVRFG 532
DV L S+ LYGLA +LP SPRRYTA+N V+FG
Sbjct: 52 DVLFR--------------------------LQSNALYGLACELPYSPRRYTAKNFVKFG 85
Query: 533 ASQDNDDPELRQPLAVDVWKSIV 555
++D D PE+RQP A+D+W +++
Sbjct: 86 GARDTDHPEIRQPSALDIWTNLL 108
>gi|440793594|gb|ELR14773.1| inosineuridine preferring nucleoside hydrolase family protein
[Acanthamoeba castellanii str. Neff]
Length = 385
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 128/291 (43%), Gaps = 53/291 (18%)
Query: 2 MNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQR--LYVN 59
M+RDD+PV G + D G Y C+Y++ +P+ R ++ +
Sbjct: 108 MDRDDVPVWAGEA-----YASAELDSGNY------------SCKYQKTVPLFPRGKVWAD 150
Query: 60 TNYGLRKAF--LPQGGRKYAPLRQPTAQQVLINAISA--GPITVFVMGSHTNFAIFLMNN 115
T GL + + L R Y P P L A++ GPI +G+ T
Sbjct: 151 TAVGLNQRYPRLTDPQRNYYP-GFPQVYDRLPQAMAEIDGPIVFLSLGTLTEIDYLFRRF 209
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY---PDDSNPYAEFNIFSDPF 172
P LK+ ++ IY+MGGA+ + GNL+ + N YAE NI+ DP
Sbjct: 210 PELKQRVDRIYIMGGAV----------------NVPGNLFFPRGNVPNTYAECNIYLDPE 253
Query: 173 AAYTVLHSGIPVTIIPLDATKTIPVSENFFVEF-ERRQNTYEAQYCFQSLKMIRDTWSGS 231
+A V SG+P+T+IPLDAT P++++F E ++ + T EA + L I+
Sbjct: 254 SARNVFISGVPITLIPLDATDDFPIADDFIAELGQKARRTKEAGWVHALLATIK------ 307
Query: 232 PPFHEAYCMWDSFMAGVAL--SIMLNSSSHNGENACSEMEYMNLTVVTSNE 280
F +WD AGV SI++ + N + + TV+ + E
Sbjct: 308 -AFGSNISLWDPLAAGVLADPSIVVEQVTVNMTVVIDQYTQIGRTVIDNVE 357
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 166/368 (45%), Gaps = 44/368 (11%)
Query: 407 KPVVFDI-DMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSAT-VDVVYDLLHMMGR 464
KP VF D++ DF+A+ YLLK + + G++ G+ + ++ LL M R
Sbjct: 53 KPTVFIFNDVNIDDFMAIKYLLKY--SHLEVGGLIPGCAGFCNMGPGIQNLFGLLAYMDR 110
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DD+PV G+ +A E++ CKY K +PL G + +DT GL + R PR
Sbjct: 111 DDVPVWAGEAYASAELDSGN---YSCKYQKTVPLFPRGKVWADTAVGLNQ---RYPRLTD 164
Query: 525 AENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIG-LQN 583
+ + G Q D L Q +A E I L+ G LT + +
Sbjct: 165 PQRNYYPGFPQVYD--RLPQAMA-----------EIDGPIVFLSLGTLTEIDYLFRRFPE 211
Query: 584 SSSVIQDVYIVGGNKGQDNEKGNVF----TVPSSKYAEFNMFLDPLAAKAVFESKLEIKL 639
+ +YI+GG N GN+F VP++ YAE N++LDP +A+ VF S + I L
Sbjct: 212 LKQRVDRIYIMGGAV---NVPGNLFFPRGNVPNT-YAECNIYLDPESARNVFISGVPITL 267
Query: 640 IPLHMQRRVASFFKILHKLRDR-KKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVL 698
IPL + +L + ++T E+ + LL + + L + L
Sbjct: 268 IPLDATDDFPIADDFIAELGQKARRTKEAGWVHALLATIKAFGSNIS--------LWDPL 319
Query: 699 GAVILGGNPHLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFA 758
A +L +P + ++ ++ D +++G+ +++ +GK V+V+ + +YD F
Sbjct: 320 AAGVL-ADPSIVVEQVTVNMTVVID-QYTQIGRTVIDNVEGKPVEVVLKAS-QDFYDIFI 376
Query: 759 EVLGDHKQ 766
E L +
Sbjct: 377 EKLSQRAR 384
>gi|444910484|ref|ZP_21230668.1| Inosine/uridine-preferring nucleoside hydrolase [Cystobacter fuscus
DSM 2262]
gi|444719103|gb|ELW59902.1| Inosine/uridine-preferring nucleoside hydrolase [Cystobacter fuscus
DSM 2262]
Length = 346
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 85/168 (50%), Gaps = 22/168 (13%)
Query: 83 TAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNST 140
TA QVL +A+ S +TV +G+ TN A L P L + +E +YVMGGA+
Sbjct: 135 TAVQVLTSALEGSERKVTVLALGNLTNLAEALQARPSLAERVEQLYVMGGAV-------- 186
Query: 141 NSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSEN 200
+ DS G P NPYAE+NI+ DP AA V + +P ++PLDAT + V+E
Sbjct: 187 -TVPGNVGDSPGVNPP---NPYAEWNIYVDPEAAARVFET-VPAMLVPLDATNHVQVTEE 241
Query: 201 FFVEFERRQNTYEAQYCFQSLKMIRD-TWSGSPPFHEAYCMWDSFMAG 247
F FE+ + T EA + ++ L D SG+ Y WD A
Sbjct: 242 FLQRFEKDRQTAEADFVYRLLASDPDYVRSGT------YFFWDPLAAA 283
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 120/276 (43%), Gaps = 56/276 (20%)
Query: 408 PVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWA-TSATVDVVYDLLHMMGRDD 466
PVV D DM + D +A+ +LL+ P + +K I V+ G A V LL + D
Sbjct: 34 PVVIDTDMGSDDAMAIAFLLRRPD--VEVKAITVTGAGLAHCEPGVRNALRLLALANHPD 91
Query: 467 IPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPL-GSGGFLD-----SDTLYGLARDLPRSP 520
IPV G + PL GS + D +D L G+ PR
Sbjct: 92 IPVACG---------------------RTTPLQGSHAYPDDWRQQADILNGVPLPEPR-- 128
Query: 521 RRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIG 580
F AS AV V S +E E K+T+L G LTNLA+ +
Sbjct: 129 ----------FSASAST---------AVQVLTSALEGSE--RKVTVLALGNLTNLAEALQ 167
Query: 581 LQNS-SSVIQDVYIVGGNKGQDNEKGNVFTV-PSSKYAEFNMFLDPLAAKAVFESKLEIK 638
+ S + ++ +Y++GG G+ V P + YAE+N+++DP AA VFE+ +
Sbjct: 168 ARPSLAERVEQLYVMGGAVTVPGNVGDSPGVNPPNPYAEWNIYVDPEAAARVFET-VPAM 226
Query: 639 LIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLL 674
L+PL V + L + ++T E+ F RLL
Sbjct: 227 LVPLDATNHVQVTEEFLQRFEKDRQTAEADFVYRLL 262
>gi|260222744|emb|CBA32608.1| hypothetical protein Csp_D33000 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 1813
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 87/179 (48%), Gaps = 24/179 (13%)
Query: 46 YRQAIPVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSH 105
Y P G R ++T +G+ LP P ++ L+ SA + + +G
Sbjct: 62 YDHQFPEGIREQMDTMFGIA---LPANPHAALPDALAFLREQLL--ASADKLHILAIGPL 116
Query: 106 TNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY---PDDSNPY 162
TN L +P L + IE IY+MGGAI D+ GN++ P + N
Sbjct: 117 TNLGTLLKESPELVQRIERIYIMGGAI----------------DAPGNVHAADPSNPNVV 160
Query: 163 AEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSL 221
AEFNI+ DP AA V SG+P+T+IPLDAT+ P++ F++ T A + +Q+L
Sbjct: 161 AEFNIYCDPVAADYVFRSGVPITLIPLDATQHAPITTAFYLRLLENHITPSADFVYQAL 219
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 111/263 (42%), Gaps = 53/263 (20%)
Query: 419 DFLALIYLLKLPVELINLKGILVSSTGWA-TSATVDVVYDLLHMMGRDDIPVGLGDVFAV 477
D++A++YLL P I + GI V TG A L+ + G ++PV A
Sbjct: 3 DWMAMLYLLNHP--QIEVVGITVVGTGAAHLEPGTRNALKLVQLAGVPELPV------AK 54
Query: 478 GEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENSVRFGASQDN 537
G P Y P G +D T++G+A LP +P +++ F
Sbjct: 55 GLTKP-------MAYDHQFPEGIREQMD--TMFGIA--LPANPHA-ALPDALAF------ 96
Query: 538 DDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDV---YIV 594
LR+ L + K+ IL GPLTNL + L+ S ++Q + YI+
Sbjct: 97 ----LREQL-----------LASADKLHILAIGPLTNLGTL--LKESPELVQRIERIYIM 139
Query: 595 GGNKGQDNEKGNVFTVPSSK---YAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASF 651
GG + GNV S AEFN++ DP+AA VF S + I LIPL +
Sbjct: 140 GGAI---DAPGNVHAADPSNPNVVAEFNIYCDPVAADYVFRSGVPITLIPLDATQHAPIT 196
Query: 652 FKILHKLRDRKKTPESVFSQRLL 674
+L + TP + F + L
Sbjct: 197 TAFYLRLLENHITPSADFVYQAL 219
>gi|329668988|gb|AEB96382.1| hypothetical protein [Angiostrongylus cantonensis]
Length = 367
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 125/291 (42%), Gaps = 56/291 (19%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPV--GQRLYV 58
M+RDDIP+ G + D G Y CRY + +P+ +++
Sbjct: 110 FMDRDDIPIWAGQA-----YASAEIDSGDYG------------CRYAKTVPLFPKGKIWA 152
Query: 59 NTNYGLRKAF-LPQGGRKYAPLRQPTAQQVLINAISA--GPITVFVMGSHTNFAIFLMNN 115
+T GL + + P R Y P T L A++A GP+ +G+ + N
Sbjct: 153 DTILGLNRRYPHPPENRNYYP-NYTTVFTNLPQAVAATDGPVYFLSLGAFSTIDFLYRQN 211
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY-PDDSNP--YAEFNIFSDPF 172
P L + ++ ++VMGGA+ GNL+ P P AE NI++DP
Sbjct: 212 PWLVQRVDRLFVMGGAVFVP----------------GNLFFPKGQAPNTVAECNIYTDPE 255
Query: 173 AAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSP 232
A V SG P T++PLDAT +S ++ F T EA++C L +I++ + +
Sbjct: 256 AVRAVFTSGTPTTLVPLDATNAFQLSWDWLNSFGAIARTKEARFCHDLLALIKNNSAST- 314
Query: 233 PFHEAYCMWDSFMAGVALSIMLNSSSHNGENACSEMEYMNLTVVTSNEPYG 283
Y +WD A +I+ +SS E +NLTV + + G
Sbjct: 315 ---SMYSLWDPLTA----AILADSS------LIVEQVTLNLTVAITGDQVG 352
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 146/349 (41%), Gaps = 47/349 (13%)
Query: 407 KPVVFDI-DMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSA-TVDVVYDLLHMMGR 464
KP VF D + D A+ LLK + + ++ G+ + ++ LLH M R
Sbjct: 56 KPKVFVFTDANTDDVQAIKLLLKY--SNVEVAALIPDCAGFCNMGPAIQNLFGLLHFMDR 113
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSP--RR 522
DDIP+ G +A E++ GC+YAK +PL G + +DT+ GL R P P R
Sbjct: 114 DDIPIWAGQAYASAEIDSG---DYGCRYAKTVPLFPKGKIWADTILGLNRRYPHPPENRN 170
Query: 523 YTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ 582
Y + F P AV V + G+ TI + Q
Sbjct: 171 YYPNYTTVF----------TNLPQAVAATDGPVYFLSLGAFSTI----------DFLYRQ 210
Query: 583 NSSSV--IQDVYIVGGNKGQDNEKGNVF----TVPSSKYAEFNMFLDPLAAKAVFESKLE 636
N V + ++++GG GN+F P++ AE N++ DP A +AVF S
Sbjct: 211 NPWLVQRVDRLFVMGGAVF---VPGNLFFPKGQAPNT-VAECNIYTDPEAVRAVFTSGTP 266
Query: 637 IKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGE 696
L+PL + L+ +T E+ F LL + S Y L +
Sbjct: 267 TTLVPLDATNAFQLSWDWLNSFGAIARTKEARFCHDLLALIKNNSASTSMYS-----LWD 321
Query: 697 VLGAVILGGNPHLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVL 745
L A IL + + + + +L + GD +VG+ +++ GK V+V+
Sbjct: 322 PLTAAILADSSLIVEQVTL-NLTVAITGD--QVGRTVIDDVDGKPVQVV 367
>gi|388457237|ref|ZP_10139532.1| inosine-uridine preferring nucleoside hydrolase [Fluoribacter
dumoffii Tex-KL]
Length = 337
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 87/182 (47%), Gaps = 26/182 (14%)
Query: 83 TAQQVLINAISAG--PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNST 140
TA Q+L + + P+ + +G TN + P +K NI+ IY+MGGA+
Sbjct: 127 TAIQLLESTLKKAKEPVEILAIGPLTNLGGLVTQVPEIKNNIKMIYIMGGAV-------- 178
Query: 141 NSSQSEQCDSIGNLYPDD---SNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPV 197
D+ GNL D N AE+N + DP+AA VL SGIP+T++ LD T +PV
Sbjct: 179 --------DTRGNLADVDHTIKNTSAEWNFYVDPYAADKVLRSGIPITLVGLDVTNQVPV 230
Query: 198 SENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPFHEAYCMWDSFMAGVALSIMLNSS 257
+++F+ + + Q Q+ ++ + + + + WD A +A + S
Sbjct: 231 TQSFYQKLKENQTNLANQFFYELFHR-----NEAEIYEHKWYFWDVLSAVIAYDNSIVQS 285
Query: 258 SH 259
SH
Sbjct: 286 SH 287
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 156/363 (42%), Gaps = 61/363 (16%)
Query: 406 GKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWA-TSATVDVVYDLLHMMGR 464
+ + D D+ D LA++YLL + I++K I V TG A A + V LL +M
Sbjct: 23 ARSFIIDTDVGVDDELAILYLLAQ--KDIDIKAITVVGTGEAHCPAGLRNVAGLLALMHH 80
Query: 465 DDIPVGLG-DVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRY 523
+IP+ G DV G +FP + + + +D L G A LP+
Sbjct: 81 KNIPIACGTDVPMKG--THQFP-----DWLRQL---------ADNLVGAADLLPQ----- 119
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESI-EPGSKITILTNGPLTNL----AQI 578
V+ SQ A+ + +S ++ EP + IL GPLTNL Q+
Sbjct: 120 -----VKLPPSQT----------AIQLLESTLKKAKEP---VEILAIGPLTNLGGLVTQV 161
Query: 579 IGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIK 638
++N+ I+ +YI+GG +V + AE+N ++DP AA V S + I
Sbjct: 162 PEIKNN---IKMIYIMGGAVDTRGNLADVDHTIKNTSAEWNFYVDPYAADKVLRSGIPIT 218
Query: 639 LIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVL 698
L+ L + +V KL++ + + F L + Y H + +VL
Sbjct: 219 LVGLDVTNQVPVTQSFYQKLKENQTNLANQFFYELFH-----RNEAEIYEH-KWYFWDVL 272
Query: 699 GAVILGGNPHLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFA 758
AVI N + ++ K L ++ + + G IV+ E+G V+V S+N + +
Sbjct: 273 SAVIAYDNSIVQSSH--KKLRVVLSPE-EQAGSTIVD-EKGNNVQVCTSVNKGRFENILM 328
Query: 759 EVL 761
E L
Sbjct: 329 ETL 331
>gi|284038142|ref|YP_003388072.1| inosine/uridine-preferring nucleoside hydrolase [Spirosoma linguale
DSM 74]
gi|283817435|gb|ADB39273.1| Inosine/uridine-preferring nucleoside hydrolase [Spirosoma linguale
DSM 74]
Length = 309
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 153/358 (42%), Gaps = 60/358 (16%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLP-VELINLKGILVSSTGWATSATVDVVYDLLHMMG 463
M KP++ D D + D L+ + +L +P VELI G+ V+ ++ Y LL +MG
Sbjct: 1 MPKPLLMDHDGAIDDLLSQLLVLTMPDVELI---GVTVTPADCYIEPALESAYKLLQLMG 57
Query: 464 RDDIPVGLGDVFAVGEVNPKFPPIGGCK--YAKAIPLGSGGFLDSDTLYGLARDLPRSPR 521
R+ +P+G GD + + FP + A+PL +LP+SP
Sbjct: 58 REQVPLGRGDYYGIN----AFPSEWRARPEIINALPL--------------LINLPKSPD 99
Query: 522 RYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGS-KITILTNGPLTNLAQIIG 580
Y ++ P+L I+ + + K+TIL GP +NL ++
Sbjct: 100 PYGYLSA-----------PDL-----------IIRQLSTATEKVTILMTGPCSNL--VMA 135
Query: 581 LQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLI 640
L+ + + + + G GNV T AE+N+F DP+ ++ +F +L + LI
Sbjct: 136 LEKAPELKAAIAEIVWMGGAFRTTGNVQTFQHDGTAEWNVFWDPVCSQKLFSYELPLTLI 195
Query: 641 PLHMQRRVASFFKILHKLRDRKKTPESVFS-QRLLQGLMTLQQSHHSYHHVDTFLGEVLG 699
PL + V K L L + S + Q L T+ H++Y F+ ++L
Sbjct: 196 PLDVTNHVPVTKKFLSTLASQIDHKLSNLTGQFWALTLDTIPSYHYTY-----FMWDILA 250
Query: 700 AVILGGNPHLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHF 757
L + + + I++ + GQ ++ E G ++ +NVA +Y++
Sbjct: 251 TSYLA----MPEQFMIETAKANVSTRPPNAGQTYLD-ENGYTIRFATDVNVAYFYEYL 303
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 96/244 (39%), Gaps = 53/244 (21%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQRLYVNT 60
+M R+ +P+G G GI + E R R I L +N
Sbjct: 55 LMGREQVPLGRGDYYGI--------------------NAFPSEWRARPEIINALPLLIN- 93
Query: 61 NYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHL 118
LP+ Y L P ++I +S +T+ + G +N + L P L
Sbjct: 94 --------LPKSPDPYGYLSAP---DLIIRQLSTATEKVTILMTGPCSNLVMALEKAPEL 142
Query: 119 KKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVL 178
K I I MGGA F +T + Q+ Q D AE+N+F DP + +
Sbjct: 143 KAAIAEIVWMGGA-----FRTTGNVQTFQHDGT-----------AEWNVFWDPVCSQKLF 186
Query: 179 HSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPFHEAY 238
+P+T+IPLD T +PV++ F + + + Q + DT P +H Y
Sbjct: 187 SYELPLTLIPLDVTNHVPVTKKFLSTLASQIDHKLSNLTGQFWALTLDT---IPSYHYTY 243
Query: 239 CMWD 242
MWD
Sbjct: 244 FMWD 247
>gi|440790797|gb|ELR12065.1| inosineuridine preferring nucleoside hydrolase family protein
[Acanthamoeba castellanii str. Neff]
Length = 340
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 102/231 (44%), Gaps = 41/231 (17%)
Query: 71 QGGRKYAPLRQPTAQQVLINAISA--GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVM 128
Q R Y P P + L AI+A GP+ +G+ T P LK+ + I +M
Sbjct: 118 QKTRNYYP-GFPQVYEPLRAAIAALDGPVEFLSLGTLTEIDYLFRRYPDLKQRVRRITIM 176
Query: 129 GGAIRSDCFNSTNSSQSEQCDSIGNLY-PDDSNP--YAEFNIFSDPFAAYTVLHSGIPVT 185
GGA+ GNL+ P S P AE NI+ DP +A V SG+P+
Sbjct: 177 GGAVHVP----------------GNLFFPRGSAPNTVAECNIYLDPHSARNVFVSGVPIR 220
Query: 186 IIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPFHEAYCMWDSFM 245
++PLDAT +S F EF+ T EA++ L +I++ + + Y +WD
Sbjct: 221 LVPLDATNAFQLSWEFLNEFDDVARTKEAKFVKDLLILIKNNSAAT----SMYSLWDPLT 276
Query: 246 AGVALSIMLNSSSHNGENACSEMEYMNLTVVTSNEPYGISDGSNPLIDGLE 296
A + + H + E E +N+TVVTS S +ID +E
Sbjct: 277 AAIL-------ADH---SIIFEEETVNMTVVTSG-----SQAGRTVIDNVE 312
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 155/358 (43%), Gaps = 66/358 (18%)
Query: 414 DMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSAT-VDVVYDLLHMMGRDDIPVGLG 472
D++ DF+AL +LK + + G + G+ + ++ LL M RDD+PV G
Sbjct: 43 DVNTDDFMALKLILKY--SNVKVGGFVAGCAGFCNMGPGIQNLFGLLKFMDRDDVPVWAG 100
Query: 473 DVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENSVRFG 532
+ +A E++ SG + S T P P+ Y
Sbjct: 101 EAYASTEID------------------SGNY--SCTFQKTRNYYPGFPQVY--------- 131
Query: 533 ASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVY 592
+PL ++ + +++ + L+ G LT + + + + Q V
Sbjct: 132 -----------EPL-----RAAIAALD--GPVEFLSLGTLTEIDYL--FRRYPDLKQRVR 171
Query: 593 IVGGNKGQDNEKGNVF----TVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
+ G + GN+F + P++ AE N++LDP +A+ VF S + I+L+PL
Sbjct: 172 RITIMGGAVHVPGNLFFPRGSAPNT-VAECNIYLDPHSARNVFVSGVPIRLVPLDATNAF 230
Query: 649 ASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGGNPH 708
++ L++ D +T E+ F + LL + + Y L + L A IL +
Sbjct: 231 QLSWEFLNEFDDVARTKEAKFVKDLLILIKNNSAATSMYS-----LWDPLTAAILADHSI 285
Query: 709 LNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEVLGDHKQ 766
+ + + ++ +++ G S+ G+ +++ +GK V+V+ + + +YD F + L ++
Sbjct: 286 IFEEETV-NMTVVTSG--SQAGRTVIDNVEGKPVQVVLTAD-PDFYDIFIDKLNRRRR 339
>gi|357502377|ref|XP_003621477.1| Pleiotropic drug resistance ABC transporter family protein
[Medicago truncatula]
gi|355496492|gb|AES77695.1| Pleiotropic drug resistance ABC transporter family protein
[Medicago truncatula]
Length = 749
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 67/118 (56%), Gaps = 26/118 (22%)
Query: 587 VIQDVYIVGGNKGQDNE-KGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQ 645
V +VYIVGG+ + E KGNVF+V S++++EF MF LAAK VFES +
Sbjct: 321 VTDEVYIVGGHISSNAEDKGNVFSVLSNQFSEFIMF---LAAKTVFES----------ID 367
Query: 646 RRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVIL 703
AS F VFS+RLL L L+Q H YHH+DTFL EVLGAV+L
Sbjct: 368 YPAASEFVY------------DVFSKRLLSSLHHLKQIHDRYHHMDTFLREVLGAVVL 413
>gi|270159304|ref|ZP_06187960.1| pyrimidine-specific ribonucleoside hydrolase RihB [Legionella
longbeachae D-4968]
gi|289165872|ref|YP_003456010.1| inosine-uridine preferring nucleoside hydrolase [Legionella
longbeachae NSW150]
gi|269987643|gb|EEZ93898.1| pyrimidine-specific ribonucleoside hydrolase RihB [Legionella
longbeachae D-4968]
gi|288859045|emb|CBJ12974.1| putative inosine-uridine preferring nucleoside hydrolase
[Legionella longbeachae NSW150]
Length = 335
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 26/172 (15%)
Query: 83 TAQQVLINAISAG--PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNST 140
TA Q+L + + P+ + +G TN + P L I+ IY+MGGA+
Sbjct: 127 TAVQLLESTLRGAKEPVEILAVGPLTNLGALVDKAPELINKIKMIYIMGGAV-------- 178
Query: 141 NSSQSEQCDSIGNLYPDD---SNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPV 197
+S GNL D N AE+NI+ DP AA V SG+P+T++ LD T +PV
Sbjct: 179 --------ESTGNLVEVDQTIKNTTAEWNIYVDPKAADHVFRSGVPITMVGLDVTNQVPV 230
Query: 198 SENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPFHEAYCMWDSFMAGVA 249
++ F+ + ++ QN+ Q+ ++ + + + WD A VA
Sbjct: 231 TQAFYQKLKQNQNSLANQFFYELFHR-----NEAEIIDHKWYFWDVLSAVVA 277
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 119/282 (42%), Gaps = 63/282 (22%)
Query: 407 KPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSAT-VDVVYDLLHMMGRD 465
+ + D D+ D LAL+YLL+ + I++K I V TG + + V LL +M ++
Sbjct: 24 RSFIIDTDVGTDDELALLYLLRQ--KDIDIKAITVVGTGESHCPDGLKNVAGLLALMHQE 81
Query: 466 DIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPL-GSGGFLD-----SDTLYGLARDLPRS 519
IP+ G ++ PL G+ F D +D L G A LP+
Sbjct: 82 KIPLACG---------------------RSTPLAGNHHFPDWLRKQADNLAGAADLLPKV 120
Query: 520 PRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSK--ITILTNGPLTNLAQ 577
+ T++ +V+ ++ES G+K + IL GPLTNL
Sbjct: 121 EVK-TSQTAVQ-----------------------LLESTLRGAKEPVEILAVGPLTNLGA 156
Query: 578 IIG----LQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFES 633
++ L N I+ +YI+GG V + AE+N+++DP AA VF S
Sbjct: 157 LVDKAPELINK---IKMIYIMGGAVESTGNLVEVDQTIKNTTAEWNIYVDPKAADHVFRS 213
Query: 634 KLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQ 675
+ I ++ L + +V KL+ + + + F L
Sbjct: 214 GVPITMVGLDVTNQVPVTQAFYQKLKQNQNSLANQFFYELFH 255
>gi|398848907|ref|ZP_10605698.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas sp. GM84]
gi|398246675|gb|EJN32156.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas sp. GM84]
Length = 335
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 66/125 (52%), Gaps = 24/125 (19%)
Query: 78 PLRQPTAQQVLINAISAG---PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
PL Q +A Q L++ ++A IT+ ++G TN A+ L P + K I+ + VMGGA
Sbjct: 121 PLAQGSAVQYLVDTLAAAKPQSITLVMLGPQTNLALALTQRPEIAKGIKEVVVMGGA--- 177
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKT 194
FN N + P AEFN+F+DP AA VL SG+P+T +PLD T
Sbjct: 178 -HFNGGNIT-----------------PVAEFNLFADPHAAQVVLASGVPMTYLPLDVTHK 219
Query: 195 IPVSE 199
+ S+
Sbjct: 220 LLTSD 224
Score = 42.7 bits (99), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 102/259 (39%), Gaps = 60/259 (23%)
Query: 407 KPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDD 466
+ ++ D D A D +AL + P EL N++ I + T GR+D
Sbjct: 25 RELIIDTDPGADDVVALFLAMASPEEL-NIRAITTVAGNVRLDKTSRNARLAREWAGRED 83
Query: 467 IPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAE 526
IPV YA G R L R+P Y AE
Sbjct: 84 IPV----------------------YA-----------------GAGRPLVRTPI-YAAE 103
Query: 527 NSVRFGASQDNDDPELRQPLA----VDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ 582
G + E +QPLA V + + +P S IT++ GP TNLA + L
Sbjct: 104 VHGEEGLTGVRVH-EPKQPLAQGSAVQYLVDTLAAAKPQS-ITLVMLGPQTNLA--LALT 159
Query: 583 NSSSV---IQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKL 639
+ I++V ++GG GN+ V AEFN+F DP AA+ V S + +
Sbjct: 160 QRPEIAKGIKEVVVMGGAH---FNGGNITPV-----AEFNLFADPHAAQVVLASGVPMTY 211
Query: 640 IPLHMQRRVASFFKILHKL 658
+PL + ++ + L +L
Sbjct: 212 LPLDVTHKLLTSDARLKQL 230
>gi|340788091|ref|YP_004753556.1| inosine-uridine preferring nucleoside hydrolase [Collimonas
fungivorans Ter331]
gi|340553358|gb|AEK62733.1| Inosine-uridine preferring nucleoside hydrolase [Collimonas
fungivorans Ter331]
Length = 356
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 64/118 (54%), Gaps = 24/118 (20%)
Query: 78 PLRQPTAQQVLINAISAG---PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
PL + A Q LI+ ++A +T+ +G TN A+ L+ NP +K+ I+ I +MGGA
Sbjct: 142 PLAKGNAVQYLIDTLTAAKPQSMTIVTLGPQTNLAMALIENPGIKQGIKEIVMMGGA--- 198
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
FN N + P AEFN+F+DP A+ V SG+P+T+IPLD T
Sbjct: 199 -HFNGGNIT-----------------PAAEFNVFADPHASDVVFKSGLPITVIPLDVT 238
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 12/123 (9%)
Query: 541 ELRQPLA----VDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGG 596
E +QPLA V + + +P S +TI+T GP TNLA + L + + Q + +
Sbjct: 138 EPKQPLAKGNAVQYLIDTLTAAKPQS-MTIVTLGPQTNLA--MALIENPGIKQGIKEIVM 194
Query: 597 NKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILH 656
G GN+ + AEFN+F DP A+ VF+S L I +IPL + ++ + + +
Sbjct: 195 MGGAHFNGGNI-----TPAAEFNVFADPHASDVVFKSGLPITVIPLDVTHKMLTSPERID 249
Query: 657 KLR 659
+LR
Sbjct: 250 RLR 252
>gi|298245531|ref|ZP_06969337.1| Inosine/uridine-preferring nucleoside hydrolase [Ktedonobacter
racemifer DSM 44963]
gi|297553012|gb|EFH86877.1| Inosine/uridine-preferring nucleoside hydrolase [Ktedonobacter
racemifer DSM 44963]
Length = 310
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 73/157 (46%), Gaps = 24/157 (15%)
Query: 50 IPVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISA-GPITVFVMGSHTNF 108
+P G V+ GL + LP+ AP Q A ++ + A G IT+ +G TN
Sbjct: 72 LPHGDAASVHGQNGLGQLQLPEP--HIAPHPQHAADLIIERVMQAPGEITLVAIGPLTNL 129
Query: 109 AIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIF 168
A+ L P + + + +Y+MGGA+R P + P AEFNI+
Sbjct: 130 ALALRKEPRIARAVREVYIMGGALR---------------------VPGNVTPAAEFNIY 168
Query: 169 SDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEF 205
DP AA+ V H+G P+ I+ LD T + ++ F +
Sbjct: 169 CDPHAAHVVFHAGWPLRIVSLDVTHQVSLTPEDFAQL 205
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 16/101 (15%)
Query: 554 IVESI--EPGSKITILTNGPLTNLAQIIGLQNSSSV---IQDVYIVGGNKGQDNEKGNVF 608
I+E + PG +IT++ GPLTNLA + L+ + +++VYI+GG GNV
Sbjct: 107 IIERVMQAPG-EITLVAIGPLTNLA--LALRKEPRIARAVREVYIMGGAL---RVPGNV- 159
Query: 609 TVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVA 649
+ AEFN++ DP AA VF + ++++ L + +V+
Sbjct: 160 ----TPAAEFNIYCDPHAAHVVFHAGWPLRIVSLDVTHQVS 196
>gi|116053863|ref|YP_788300.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|115589084|gb|ABJ15099.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa
UCBPP-PA14]
Length = 329
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 63/136 (46%), Gaps = 24/136 (17%)
Query: 78 PLRQPTAQQVLINAISAGP---ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
PL + A LI + A P +T+ ++G TN A+ L P + K I I +MGGA
Sbjct: 115 PLAEGNAVDYLIRTLRAAPEKSVTLAMLGPETNLALALTQAPDIVKGIREIVIMGGA--- 171
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKT 194
FN N + P AEFNIF+DP AA VL SG P+T++PLD T
Sbjct: 172 -HFNGGNIT-----------------PAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHK 213
Query: 195 IPVSENFFVEFERRQN 210
I S + N
Sbjct: 214 ILTSPERIAKLRNLGN 229
Score = 46.2 bits (108), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 12/124 (9%)
Query: 541 ELRQPLA----VDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGG 596
E +QPLA VD + + P +T+ GP TNLA + L + +++ + +
Sbjct: 111 EPKQPLAEGNAVDYLIRTLRA-APEKSVTLAMLGPETNLA--LALTQAPDIVKGIREIVI 167
Query: 597 NKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILH 656
G GN+ + AEFN+F DP AA+ V +S I ++PL + ++ + + +
Sbjct: 168 MGGAHFNGGNI-----TPAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHKILTSPERIA 222
Query: 657 KLRD 660
KLR+
Sbjct: 223 KLRN 226
>gi|49088212|gb|AAT51544.1| PA0143, partial [synthetic construct]
Length = 330
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 63/136 (46%), Gaps = 24/136 (17%)
Query: 78 PLRQPTAQQVLINAISAGP---ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
PL + A LI + A P +T+ ++G TN A+ L P + K + I +MGGA
Sbjct: 115 PLAEGNAVDYLIRTLRAAPEKSVTLAILGPETNLALALTQAPDIVKGVREIVIMGGA--- 171
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKT 194
FN N + P AEFNIF+DP AA VL SG P+T++PLD T
Sbjct: 172 -HFNGGNIT-----------------PAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHK 213
Query: 195 IPVSENFFVEFERRQN 210
I S + N
Sbjct: 214 ILTSPERIAKLRNLGN 229
Score = 46.6 bits (109), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 62/124 (50%), Gaps = 12/124 (9%)
Query: 541 ELRQPLA----VDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGG 596
E +QPLA VD + + P +T+ GP TNLA + L + +++ V +
Sbjct: 111 EPKQPLAEGNAVDYLIRTLRA-APEKSVTLAILGPETNLA--LALTQAPDIVKGVREIVI 167
Query: 597 NKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILH 656
G GN+ + AEFN+F DP AA+ V +S I ++PL + ++ + + +
Sbjct: 168 MGGAHFNGGNI-----TPAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHKILTSPERIA 222
Query: 657 KLRD 660
KLR+
Sbjct: 223 KLRN 226
>gi|107099134|ref|ZP_01363052.1| hypothetical protein PaerPA_01000143 [Pseudomonas aeruginosa PACS2]
Length = 329
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 63/136 (46%), Gaps = 24/136 (17%)
Query: 78 PLRQPTAQQVLINAISAGP---ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
PL + A LI + A P +T+ ++G TN A+ L P + K I I +MGGA
Sbjct: 115 PLAEGNAVDYLIRTLRAAPEKSVTLAMLGPETNLALALTQAPDIVKGIREIVIMGGA--- 171
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKT 194
FN N + P AEFNIF+DP AA VL SG P+T++PLD T
Sbjct: 172 -HFNGGNIT-----------------PAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHK 213
Query: 195 IPVSENFFVEFERRQN 210
I S + N
Sbjct: 214 ILTSPERIAKLRNLGN 229
Score = 46.2 bits (108), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 12/124 (9%)
Query: 541 ELRQPLA----VDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGG 596
E +QPLA VD + + P +T+ GP TNLA + L + +++ + +
Sbjct: 111 EPKQPLAEGNAVDYLIRTLRA-APEKSVTLAMLGPETNLA--LALTQAPDIVKGIREIVI 167
Query: 597 NKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILH 656
G GN+ + AEFN+F DP AA+ V +S I ++PL + ++ + + +
Sbjct: 168 MGGAHFNGGNI-----TPAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHKILTSPERIA 222
Query: 657 KLRD 660
KLR+
Sbjct: 223 KLRN 226
>gi|421164887|ref|ZP_15623267.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa ATCC
700888]
gi|404544204|gb|EKA53403.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa ATCC
700888]
Length = 350
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 63/136 (46%), Gaps = 24/136 (17%)
Query: 78 PLRQPTAQQVLINAISAGP---ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
PL + A LI + A P +T+ ++G TN A+ L P + K I I +MGGA
Sbjct: 136 PLAEGNAVDYLIRTLRAAPEKSVTLAMLGPETNLALALTQAPDIVKGIREIVIMGGA--- 192
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKT 194
FN N + P AEFNIF+DP AA VL SG P+T++PLD T
Sbjct: 193 -HFNGGNIT-----------------PAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHK 234
Query: 195 IPVSENFFVEFERRQN 210
I S + N
Sbjct: 235 ILTSPERIAKLRNLGN 250
Score = 46.2 bits (108), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 12/124 (9%)
Query: 541 ELRQPLA----VDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGG 596
E +QPLA VD + + P +T+ GP TNLA + L + +++ + +
Sbjct: 132 EPKQPLAEGNAVDYLIRTLRA-APEKSVTLAMLGPETNLA--LALTQAPDIVKGIREIVI 188
Query: 597 NKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILH 656
G GN+ + AEFN+F DP AA+ V +S I ++PL + ++ + + +
Sbjct: 189 MGGAHFNGGNI-----TPAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHKILTSPERIA 243
Query: 657 KLRD 660
KLR+
Sbjct: 244 KLRN 247
>gi|355645969|ref|ZP_09054306.1| hypothetical protein HMPREF1030_03392 [Pseudomonas sp. 2_1_26]
gi|421171838|ref|ZP_15629627.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa CI27]
gi|354828662|gb|EHF12773.1| hypothetical protein HMPREF1030_03392 [Pseudomonas sp. 2_1_26]
gi|404538887|gb|EKA48401.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa CI27]
Length = 350
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 63/136 (46%), Gaps = 24/136 (17%)
Query: 78 PLRQPTAQQVLINAISAGP---ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
PL + A LI + A P +T+ ++G TN A+ L P + K I I +MGGA
Sbjct: 136 PLAEGNAVDYLIRTLRAAPEKSVTLAMLGPETNLALALTQAPDIVKGIREIVIMGGA--- 192
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKT 194
FN N + P AEFNIF+DP AA VL SG P+T++PLD T
Sbjct: 193 -HFNGGNIT-----------------PAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHK 234
Query: 195 IPVSENFFVEFERRQN 210
I S + N
Sbjct: 235 ILTSPERIAKLRNLGN 250
Score = 46.2 bits (108), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 12/124 (9%)
Query: 541 ELRQPLA----VDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGG 596
E +QPLA VD + + P +T+ GP TNLA + L + +++ + +
Sbjct: 132 EPKQPLAEGNAVDYLIRTLRA-APEKSVTLAMLGPETNLA--LALTQAPDIVKGIREIVI 188
Query: 597 NKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILH 656
G GN+ + AEFN+F DP AA+ V +S I ++PL + ++ + + +
Sbjct: 189 MGGAHFNGGNI-----TPAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHKILTSPERIA 243
Query: 657 KLRD 660
KLR+
Sbjct: 244 KLRN 247
>gi|313112289|ref|ZP_07798058.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa 39016]
gi|386063121|ref|YP_005978425.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa
NCGM2.S1]
gi|310884560|gb|EFQ43154.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa 39016]
gi|348031680|dbj|BAK87040.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa
NCGM2.S1]
Length = 350
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 63/136 (46%), Gaps = 24/136 (17%)
Query: 78 PLRQPTAQQVLINAISAGP---ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
PL + A LI + A P +T+ ++G TN A+ L P + K I I +MGGA
Sbjct: 136 PLAEGNAVDYLIRTLRAAPEKSVTLAMLGPETNLALALTQAPDIVKGIREIVIMGGA--- 192
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKT 194
FN N + P AEFNIF+DP AA VL SG P+T++PLD T
Sbjct: 193 -HFNGGNIT-----------------PAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHK 234
Query: 195 IPVSENFFVEFERRQN 210
I S + N
Sbjct: 235 ILTSPERIAKLRNLGN 250
Score = 46.2 bits (108), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 12/124 (9%)
Query: 541 ELRQPLA----VDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGG 596
E +QPLA VD + + P +T+ GP TNLA + L + +++ + +
Sbjct: 132 EPKQPLAEGNAVDYLIRTLRA-APEKSVTLAMLGPETNLA--LALTQAPDIVKGIREIVI 188
Query: 597 NKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILH 656
G GN+ + AEFN+F DP AA+ V +S I ++PL + ++ + + +
Sbjct: 189 MGGAHFNGGNI-----TPAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHKILTSPERIA 243
Query: 657 KLRD 660
KLR+
Sbjct: 244 KLRN 247
>gi|296386630|ref|ZP_06876129.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa PAb1]
gi|416883328|ref|ZP_11922092.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa
152504]
gi|334834673|gb|EGM13611.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa
152504]
Length = 350
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 63/136 (46%), Gaps = 24/136 (17%)
Query: 78 PLRQPTAQQVLINAISAGP---ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
PL + A LI + A P +T+ ++G TN A+ L P + K I I +MGGA
Sbjct: 136 PLAEGNAVDYLIRTLRAAPEKSVTLAMLGPETNLALALTQAPDIVKGIREIVIMGGA--- 192
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKT 194
FN N + P AEFNIF+DP AA VL SG P+T++PLD T
Sbjct: 193 -HFNGGNIT-----------------PAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHK 234
Query: 195 IPVSENFFVEFERRQN 210
I S + N
Sbjct: 235 ILTSPERIAKLRNLGN 250
Score = 46.2 bits (108), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 12/124 (9%)
Query: 541 ELRQPLA----VDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGG 596
E +QPLA VD + + P +T+ GP TNLA + L + +++ + +
Sbjct: 132 EPKQPLAEGNAVDYLIRTLRA-APEKSVTLAMLGPETNLA--LALTQAPDIVKGIREIVI 188
Query: 597 NKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILH 656
G GN+ + AEFN+F DP AA+ V +S I ++PL + ++ + + +
Sbjct: 189 MGGAHFNGGNI-----TPAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHKILTSPERIA 243
Query: 657 KLRD 660
KLR+
Sbjct: 244 KLRN 247
>gi|421157120|ref|ZP_15616520.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa ATCC
25324]
gi|404550933|gb|EKA59639.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa ATCC
25324]
Length = 350
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 63/136 (46%), Gaps = 24/136 (17%)
Query: 78 PLRQPTAQQVLINAISAGP---ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
PL + A LI + A P +T+ ++G TN A+ L P + K I I +MGGA
Sbjct: 136 PLAEGNAVDYLIRTLRAAPEKSVTLAMLGPETNLALALTQAPDIVKGIREIVIMGGA--- 192
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKT 194
FN N + P AEFNIF+DP AA VL SG P+T++PLD T
Sbjct: 193 -HFNGGNIT-----------------PAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHK 234
Query: 195 IPVSENFFVEFERRQN 210
I S + N
Sbjct: 235 ILTSPERIAKLRNLGN 250
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 12/124 (9%)
Query: 541 ELRQPLA----VDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGG 596
E +QPLA VD + + P +T+ GP TNLA + L + +++ + +
Sbjct: 132 EPKQPLAEGNAVDYLIRTLRA-APEKSVTLAMLGPETNLA--LALTQAPDIVKGIREIVI 188
Query: 597 NKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILH 656
G GN+ + AEFN+F DP AA+ V +S I ++PL + ++ + + +
Sbjct: 189 MGGAHFNGGNI-----TPAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHKILTSPERIA 243
Query: 657 KLRD 660
KLR+
Sbjct: 244 KLRN 247
>gi|424943473|ref|ZP_18359236.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa
NCMG1179]
gi|346059919|dbj|GAA19802.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa
NCMG1179]
Length = 350
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 63/136 (46%), Gaps = 24/136 (17%)
Query: 78 PLRQPTAQQVLINAISAGP---ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
PL + A LI + A P +T+ ++G TN A+ L P + K I I +MGGA
Sbjct: 136 PLAEGNAVDYLIRTLRAAPEKSVTLAMLGPETNLALALTQAPDIVKGIREIVIMGGA--- 192
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKT 194
FN N + P AEFNIF+DP AA VL SG P+T++PLD T
Sbjct: 193 -HFNGGNIT-----------------PAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHK 234
Query: 195 IPVSENFFVEFERRQN 210
I S + N
Sbjct: 235 ILTSPERIAKLRNLGN 250
Score = 46.6 bits (109), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 12/124 (9%)
Query: 541 ELRQPLA----VDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGG 596
E +QPLA VD + + P +T+ GP TNLA + L + +++ + +
Sbjct: 132 ESKQPLAEGNAVDYLIRTLRA-APEKSVTLAMLGPETNLA--LALTQAPDIVKGIREIVI 188
Query: 597 NKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILH 656
G GN+ + AEFN+F DP AA+ V +S I ++PL + ++ + + +
Sbjct: 189 MGGAHFNGGNI-----TPAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHKILTSPERIA 243
Query: 657 KLRD 660
KLR+
Sbjct: 244 KLRN 247
>gi|254237616|ref|ZP_04930939.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa C3719]
gi|126169547|gb|EAZ55058.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa C3719]
Length = 350
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 63/136 (46%), Gaps = 24/136 (17%)
Query: 78 PLRQPTAQQVLINAISAGP---ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
PL + A LI + A P +T+ ++G TN A+ L P + K I I +MGGA
Sbjct: 136 PLAEGNAVDYLIRTLRAAPEKSVTLAMLGPETNLALALTQAPDIVKGIREIVIMGGA--- 192
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKT 194
FN N + P AEFNIF+DP AA VL SG P+T++PLD T
Sbjct: 193 -HFNGGNIT-----------------PAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHK 234
Query: 195 IPVSENFFVEFERRQN 210
I S + N
Sbjct: 235 ILTSPERIAKLRNLGN 250
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 12/124 (9%)
Query: 541 ELRQPLA----VDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGG 596
E +QPLA VD + + P +T+ GP TNLA + L + +++ + +
Sbjct: 132 EPKQPLAEGNAVDYLIRTLRA-APEKSVTLAMLGPETNLA--LALTQAPDIVKGIREIVI 188
Query: 597 NKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILH 656
G GN+ + AEFN+F DP AA+ V +S I ++PL + ++ + + +
Sbjct: 189 MGGAHFNGGNI-----TPAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHKILTSPERIA 243
Query: 657 KLRD 660
KLR+
Sbjct: 244 KLRN 247
>gi|420136487|ref|ZP_14644533.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa CIG1]
gi|403250724|gb|EJY64134.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa CIG1]
Length = 350
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 63/136 (46%), Gaps = 24/136 (17%)
Query: 78 PLRQPTAQQVLINAISAGP---ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
PL + A LI + A P +T+ ++G TN A+ L P + K I I +MGGA
Sbjct: 136 PLAEGNAVDYLIRTLRAAPEKSVTLAMLGPETNLALALTQAPDIVKGIREIVIMGGA--- 192
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKT 194
FN N + P AEFNIF+DP AA VL SG P+T++PLD T
Sbjct: 193 -HFNGGNIT-----------------PAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHK 234
Query: 195 IPVSENFFVEFERRQN 210
I S + N
Sbjct: 235 ILTSPERIAKLRNLGN 250
Score = 46.2 bits (108), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 12/124 (9%)
Query: 541 ELRQPLA----VDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGG 596
E +QPLA VD + + P +T+ GP TNLA + L + +++ + +
Sbjct: 132 EPKQPLAEGNAVDYLIRTLRA-APEKSVTLAMLGPETNLA--LALTQAPDIVKGIREIVI 188
Query: 597 NKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILH 656
G GN+ + AEFN+F DP AA+ V +S I ++PL + ++ + + +
Sbjct: 189 MGGAHFNGGNI-----TPAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHKILTSPERIA 243
Query: 657 KLRD 660
KLR+
Sbjct: 244 KLRN 247
>gi|218888888|ref|YP_002437752.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa
LESB58]
gi|386056213|ref|YP_005972735.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa M18]
gi|392981555|ref|YP_006480142.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa DK2]
gi|416865840|ref|ZP_11915829.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa
138244]
gi|419754177|ref|ZP_14280568.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa
PADK2_CF510]
gi|421151077|ref|ZP_15610706.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa ATCC
14886]
gi|421178035|ref|ZP_15635660.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa E2]
gi|451984606|ref|ZP_21932854.1| Inosine-uridine preferring nucleoside hydrolase [Pseudomonas
aeruginosa 18A]
gi|218769111|emb|CAW24871.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa
LESB58]
gi|334834233|gb|EGM13216.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa
138244]
gi|347302519|gb|AEO72633.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa M18]
gi|384399395|gb|EIE45767.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa
PADK2_CF510]
gi|392317060|gb|AFM62440.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa DK2]
gi|404528130|gb|EKA38248.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa ATCC
14886]
gi|404549053|gb|EKA57979.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa E2]
gi|451757739|emb|CCQ85377.1| Inosine-uridine preferring nucleoside hydrolase [Pseudomonas
aeruginosa 18A]
gi|453045194|gb|EME92914.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa
PA21_ST175]
Length = 350
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 63/136 (46%), Gaps = 24/136 (17%)
Query: 78 PLRQPTAQQVLINAISAGP---ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
PL + A LI + A P +T+ ++G TN A+ L P + K I I +MGGA
Sbjct: 136 PLAEGNAVDYLIRTLRAAPEKSVTLAMLGPETNLALALTQAPDIVKGIREIVIMGGA--- 192
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKT 194
FN N + P AEFNIF+DP AA VL SG P+T++PLD T
Sbjct: 193 -HFNGGNIT-----------------PAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHK 234
Query: 195 IPVSENFFVEFERRQN 210
I S + N
Sbjct: 235 ILTSPERIAKLRNLGN 250
Score = 46.6 bits (109), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 12/124 (9%)
Query: 541 ELRQPLA----VDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGG 596
E +QPLA VD + + P +T+ GP TNLA + L + +++ + +
Sbjct: 132 EPKQPLAEGNAVDYLIRTLRA-APEKSVTLAMLGPETNLA--LALTQAPDIVKGIREIVI 188
Query: 597 NKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILH 656
G GN+ + AEFN+F DP AA+ V +S I ++PL + ++ + + +
Sbjct: 189 MGGAHFNGGNI-----TPAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHKILTSPERIA 243
Query: 657 KLRD 660
KLR+
Sbjct: 244 KLRN 247
>gi|401889221|gb|EJT53160.1| inosine-uridine preferring nucleoside hydrolase [Trichosporon
asahii var. asahii CBS 2479]
gi|406698897|gb|EKD02118.1| inosine-uridine preferring nucleoside hydrolase [Trichosporon
asahii var. asahii CBS 8904]
Length = 316
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 65/146 (44%), Gaps = 26/146 (17%)
Query: 95 GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNL 154
G IT+ +G TN A+ L P L K I+ IY+MGG++ S GN+
Sbjct: 119 GEITICALGPLTNIAMALRRRPELIKAIKAIYLMGGSVGS-----------------GNV 161
Query: 155 YPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFE----RRQN 210
P AEFNIF DP AA V SG+PV ++PL+ T ++ + R N
Sbjct: 162 -----TPAAEFNIFVDPEAARVVFRSGVPVVMVPLEVTHRALATDQVITDIAALNTRLSN 216
Query: 211 TYEAQYCFQSLKMIRDTWSGSPPFHE 236
F +R GSPP H+
Sbjct: 217 ALVKILGFFKEAYLRTQGFGSPPIHD 242
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 69/128 (53%), Gaps = 15/128 (11%)
Query: 535 QDNDDPELRQPL---AVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS-SSVIQD 590
+ D P R+ + A D+ +V S PG +ITI GPLTN+A + + I+
Sbjct: 91 EPGDMPAPREAIETPACDLIADLVLS-RPG-EITICALGPLTNIAMALRRRPELIKAIKA 148
Query: 591 VYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVAS 650
+Y++GG+ G GNV + AEFN+F+DP AA+ VF S + + ++PL + R +
Sbjct: 149 IYLMGGSVGS----GNV-----TPAAEFNIFVDPEAARVVFRSGVPVVMVPLEVTHRALA 199
Query: 651 FFKILHKL 658
+++ +
Sbjct: 200 TDQVITDI 207
>gi|254243250|ref|ZP_04936572.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa 2192]
gi|126196628|gb|EAZ60691.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa 2192]
Length = 350
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 63/136 (46%), Gaps = 24/136 (17%)
Query: 78 PLRQPTAQQVLINAISAGP---ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
PL + A LI + A P +T+ ++G TN A+ L P + K I I +MGGA
Sbjct: 136 PLAEGNAVDYLIRTLRAAPEKSVTLAMLGPETNLALALTQAPDIVKGIREIVIMGGA--- 192
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKT 194
FN N + P AEFNIF+DP AA VL SG P+T++PLD T
Sbjct: 193 -HFNGGNIT-----------------PAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHK 234
Query: 195 IPVSENFFVEFERRQN 210
I S + N
Sbjct: 235 ILTSPERIAKLRNLGN 250
Score = 46.6 bits (109), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 12/124 (9%)
Query: 541 ELRQPLA----VDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGG 596
E +QPLA VD + + P +T+ GP TNLA + L + +++ + +
Sbjct: 132 EPKQPLAEGNAVDYLIRTLRA-APEKSVTLAMLGPETNLA--LALTQAPDIVKGIREIVI 188
Query: 597 NKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILH 656
G GN+ + AEFN+F DP AA+ V +S I ++PL + ++ + + +
Sbjct: 189 MGGAHFNGGNI-----TPAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHKILTSPERIA 243
Query: 657 KLRD 660
KLR+
Sbjct: 244 KLRN 247
>gi|152984477|ref|YP_001345616.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa PA7]
gi|150959635|gb|ABR81660.1| probable nucleoside hydrolase [Pseudomonas aeruginosa PA7]
Length = 350
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 60/121 (49%), Gaps = 24/121 (19%)
Query: 78 PLRQPTAQQVLINAISAGP---ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
PL + A LI + A P +T+ ++G TN A+ L P + K I I +MGGA
Sbjct: 136 PLAEGNAVDYLIRTLRAAPEKSVTLAMLGPETNLALALTQAPDIVKGIREIVIMGGA--- 192
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKT 194
FN N + P AEFNIF+DP AA VL SG P+T++PLD T
Sbjct: 193 -HFNGGNIT-----------------PAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHK 234
Query: 195 I 195
I
Sbjct: 235 I 235
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 12/124 (9%)
Query: 541 ELRQPLA----VDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGG 596
E +QPLA VD + + P +T+ GP TNLA + L + +++ + +
Sbjct: 132 EPKQPLAEGNAVDYLIRTLRA-APEKSVTLAMLGPETNLA--LALTQAPDIVKGIREIVI 188
Query: 597 NKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILH 656
G GN+ + AEFN+F DP AA+ V +S I ++PL + ++ + + +
Sbjct: 189 MGGAHFNGGNI-----TPAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHKILTSPERIA 243
Query: 657 KLRD 660
+LR+
Sbjct: 244 RLRN 247
>gi|326326084|ref|YP_004250894.1| Putative Inosine/uridine-preferring nucleoside hydrolase [Vibrio
nigripulchritudo]
gi|323669136|emb|CBJ93188.1| Putative Inosine/uridine-preferring nucleoside hydrolase [Vibrio
nigripulchritudo]
Length = 316
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 83/179 (46%), Gaps = 30/179 (16%)
Query: 73 GRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGG 130
G AP+ + + + + + I ++ P+TV +G TN A L + P + ++I+ + MGG
Sbjct: 99 GLPLAPISEKSGRVFVADVIRNNSRPVTVIDVGPATNLAQTLRSFPDVAEHIQQVIWMGG 158
Query: 131 AIRSDCFNSTNSSQSEQCDSIGNLYPDDS---NPYAEFNIFSDPFAAYTVLHSGIPVTII 187
A++ GN+YP N AE+N++ DP AA TVL SG+ +T+
Sbjct: 159 ALKV----------------AGNVYPHHQPLHNGTAEWNVYWDPEAAMTVLESGLRITLC 202
Query: 188 PLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPFHEAYCMWDSFMA 246
PLD T +PV+ F R ++ A + Q + + Y +WD A
Sbjct: 203 PLDLTDQVPVNPGFMTFLTRHRHFAMADFAGQCYAL---------NAYRTYSVWDVLTA 252
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 107/256 (41%), Gaps = 56/256 (21%)
Query: 402 KKLMGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHM 461
+ +GK V+F D SA DF+AL L +P INL G++V+ A +V +L +
Sbjct: 2 RSSLGKDVLFCHDGSADDFMALTLLAVIPD--INLIGVVVTDGDCHIQAAAEVSRKILGL 59
Query: 462 MGRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPR 521
G +PV L D AR L P
Sbjct: 60 TGLAHVPVALSD---------------------------------------ARPLHAFPA 80
Query: 522 RYTAENSVRFGASQDNDDPELRQPLAVDVWKS----IVESIEPGSK-ITILTNGPLTNLA 576
+ + S+R + + P L PLA KS + + I S+ +T++ GP TNLA
Sbjct: 81 EWRLD-SLRINSMPIINHPGL--PLAPISEKSGRVFVADVIRNNSRPVTVIDVGPATNLA 137
Query: 577 QII-GLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKY---AEFNMFLDPLAAKAVFE 632
Q + + + IQ V +GG GNV+ + AE+N++ DP AA V E
Sbjct: 138 QTLRSFPDVAEHIQQVIWMGGAL---KVAGNVYPHHQPLHNGTAEWNVYWDPEAAMTVLE 194
Query: 633 SKLEIKLIPLHMQRRV 648
S L I L PL + +V
Sbjct: 195 SGLRITLCPLDLTDQV 210
>gi|452879450|ref|ZP_21956551.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa
VRFPA01]
gi|452183992|gb|EME11010.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa
VRFPA01]
Length = 415
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 61/121 (50%), Gaps = 24/121 (19%)
Query: 78 PLRQPTAQQVLINAISAGP---ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
PL + A LI + A P +T+ ++G TN A+ L P + K I I +MGGA
Sbjct: 136 PLAEGNAVDYLIRTLRAAPEKSVTLAMLGPETNLALALTQAPDIVKGIREIVIMGGA--- 192
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKT 194
FN GN+ P AEFNIF+DP AA VL SG P+T++PLD T
Sbjct: 193 -HFNG------------GNI-----TPAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHK 234
Query: 195 I 195
I
Sbjct: 235 I 235
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 18/127 (14%)
Query: 541 ELRQPLA----VDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSV---IQDVYI 593
E +QPLA VD + + P +T+ GP TNLA + L + + I+++ I
Sbjct: 132 EPKQPLAEGNAVDYLIRTLRA-APEKSVTLAMLGPETNLA--LALTQAPDIVKGIREIVI 188
Query: 594 VGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFK 653
+GG GN+ + AEFN+F DP AA+ V +S I ++PL + ++ + +
Sbjct: 189 MGG---AHFNGGNI-----TPAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHKILTSPE 240
Query: 654 ILHKLRD 660
+ +LR+
Sbjct: 241 RIARLRN 247
>gi|418583708|ref|ZP_13147776.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa
MPAO1/P1]
gi|418590294|ref|ZP_13154205.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa
MPAO1/P2]
gi|375046686|gb|EHS39242.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa
MPAO1/P1]
gi|375050849|gb|EHS43326.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa
MPAO1/P2]
Length = 329
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 63/136 (46%), Gaps = 24/136 (17%)
Query: 78 PLRQPTAQQVLINAISAGP---ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
PL + A LI + A P +T+ ++G TN A+ L P + K + I +MGGA
Sbjct: 115 PLAEGNAVDYLIRTLRAAPEKSVTLAMLGPETNLALALTQAPDIVKGVREIVIMGGA--- 171
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKT 194
FN N + P AEFNIF+DP AA VL SG P+T++PLD T
Sbjct: 172 -HFNGGNIT-----------------PAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHK 213
Query: 195 IPVSENFFVEFERRQN 210
I S + N
Sbjct: 214 ILTSPERIAKLRNLGN 229
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 62/124 (50%), Gaps = 12/124 (9%)
Query: 541 ELRQPLA----VDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGG 596
E +QPLA VD + + P +T+ GP TNLA + L + +++ V +
Sbjct: 111 EPKQPLAEGNAVDYLIRTLRA-APEKSVTLAMLGPETNLA--LALTQAPDIVKGVREIVI 167
Query: 597 NKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILH 656
G GN+ + AEFN+F DP AA+ V +S I ++PL + ++ + + +
Sbjct: 168 MGGAHFNGGNI-----TPAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHKILTSPERIA 222
Query: 657 KLRD 660
KLR+
Sbjct: 223 KLRN 226
>gi|338733114|ref|YP_004671587.1| hypothetical protein SNE_A12190 [Simkania negevensis Z]
gi|336482497|emb|CCB89096.1| hypothetical protein SNE_A12190 [Simkania negevensis Z]
Length = 351
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 161/362 (44%), Gaps = 67/362 (18%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTG---WATSATVDVVYDLLHMMGRD 465
VV D D D LA++YL+K P +KGI G W A V ++L ++G
Sbjct: 34 VVIDTDCDLDDMLAIVYLVKNPRA--EVKGITTVGDGISHWEYGA--QNVLNVLELIGHP 89
Query: 466 DIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTA 525
IPV G ++ V +PP + +D + G+ LP+S R A
Sbjct: 90 RIPVSFGARDSLSPVG-SYPPSWRQQ--------------ADMMSGIK--LPQSSVRPIA 132
Query: 526 ENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSS 585
E F +D+ + + K+T+L GPLTN+A + ++
Sbjct: 133 EKGADF---------------IIDI------ATKHEEKLTLLCIGPLTNIA--LAIEKKP 169
Query: 586 SV---IQDVYIVGGNKGQDNEKGNVFTVP---SSKYAEFNMFLDPLAAKAVFESKLEIKL 639
+ I+ ++I+GG GN+ P ++ AE+N+FLD AA+ VF+S + I L
Sbjct: 170 EIKDKIERIFIMGGALLS---PGNIEGKPMGFKNRVAEYNIFLDAKAAQDVFDSGIPIIL 226
Query: 640 IPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLG 699
+PL + AS L + +KTP + + L+ S + + FL + +
Sbjct: 227 VPLDVVEH-ASAKPFYDMLAENRKTPAANLVYEI------LKPSVKNKKRMREFLWDPVT 279
Query: 700 AVILGGNPHLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAE 759
AV+ NP++ Q +K + + G + G++I+ +G V+V+ ++ +YD F +
Sbjct: 280 AVLF-TNPNIAQYRDLKIVVNLRKG--PEYGRLIMGS-KGTPVQVVTQIDTDTFYDIFLK 335
Query: 760 VL 761
L
Sbjct: 336 TL 337
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 60/129 (46%), Gaps = 20/129 (15%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
+T+ +G TN A+ + P +K IE I++MGGA+ S GN+
Sbjct: 150 LTLLCIGPLTNIALAIEKKPEIKDKIERIFIMGGALLSP----------------GNIEG 193
Query: 157 DD---SNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYE 213
N AE+NIF D AA V SGIP+ ++PLD + ++ F+ + T
Sbjct: 194 KPMGFKNRVAEYNIFLDAKAAQDVFDSGIPIILVPLDVVEHAS-AKPFYDMLAENRKTPA 252
Query: 214 AQYCFQSLK 222
A ++ LK
Sbjct: 253 ANLVYEILK 261
>gi|357032185|ref|ZP_09094125.1| inosine-uridine preferring nucleoside hydrolase [Gluconobacter
morbifer G707]
gi|356414412|gb|EHH68059.1| inosine-uridine preferring nucleoside hydrolase [Gluconobacter
morbifer G707]
Length = 318
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 99/261 (37%), Gaps = 54/261 (20%)
Query: 42 GECRYRQAIPVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFV 101
G R PV +V+ G+ A LP + + T ++ A +AG IT+
Sbjct: 72 GAARPLHRPPVSAE-HVHGQSGMEGANLPAPKLRAQAMDAATHLVDVLRARAAGDITLVC 130
Query: 102 MGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNP 161
+G TN A L + P + I HI MGGA R GN+ P
Sbjct: 131 LGPLTNIATALTHAPDIAPRIRHIVAMGGAQREG----------------GNI-----TP 169
Query: 162 YAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK---------------TIPVSENFFVEFE 206
AEFN + DP AA V+ +G+P+T++PLD T PVSE
Sbjct: 170 TAEFNFYVDPHAAQIVMEAGVPLTLLPLDVTHRAIATPSRLAGLRDLKTPVSEMVL---- 225
Query: 207 RRQNTYEAQYCFQSLKMIRDTWSGSP---PFHEAYCMWDSFMAGVALSIMLNSSSHNGEN 263
A+ F+ LK W G P + +W GVA ++ + +
Sbjct: 226 ---RMIGAEDRFEKLKY---GWEGGALHDPLTVGWLLWPELFHGVACNVEIEVDA----P 275
Query: 264 ACSEMEYMNLTVVTSNEPYGI 284
C ++L VT P +
Sbjct: 276 LCMGQSVVDLWKVTDRTPNAL 296
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 106/270 (39%), Gaps = 52/270 (19%)
Query: 407 KPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDD 466
+ ++ D D D +A+ LL L + ++ I + + T LL + GR D
Sbjct: 9 RSIIIDTDPGQDDAVAI--LLALASSELKVEAITTVAGNVPVAQTTKNACALLELAGRAD 66
Query: 467 IPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAE 526
IPV FP G AR L R P
Sbjct: 67 IPV--------------FP-------------------------GAARPLHRPPVSAEHV 87
Query: 527 NSVRFGASQDNDDPELRQPLAVDVWKSIVESIEP--GSKITILTNGPLTNLAQIIGLQNS 584
+ + P+LR A+D +V+ + IT++ GPLTN+A L ++
Sbjct: 88 HGQSGMEGANLPAPKLRAQ-AMDAATHLVDVLRARAAGDITLVCLGPLTNIAT--ALTHA 144
Query: 585 SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHM 644
+ + + G E GN+ + AEFN ++DP AA+ V E+ + + L+PL +
Sbjct: 145 PDIAPRIRHIVAMGGAQREGGNI-----TPTAEFNFYVDPHAAQIVMEAGVPLTLLPLDV 199
Query: 645 QRRVASFFKILHKLRDRKKTPESVFSQRLL 674
R + L LRD KTP S R++
Sbjct: 200 THRAIATPSRLAGLRD-LKTPVSEMVLRMI 228
>gi|386012745|ref|YP_005931022.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas putida
BIRD-1]
gi|313499451|gb|ADR60817.1| Inosine/uridine-preferring nucleoside hydrolase [Pseudomonas putida
BIRD-1]
Length = 333
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 64/125 (51%), Gaps = 24/125 (19%)
Query: 77 APLRQPTAQQVLINAISAG---PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIR 133
APL Q A Q L++ + A ITV ++G TN A+ L+ P + K I+ + VMGGA
Sbjct: 118 APLAQGNAVQYLVDTLGAAKPHSITVAMLGPQTNLALALIQRPSIAKGIKEVVVMGGA-- 175
Query: 134 SDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
FN N + P AEFN+++DP AA VL SG+ +T +PLD T
Sbjct: 176 --HFNGGNIT-----------------PVAEFNLYADPHAAEVVLASGVQLTYLPLDVTH 216
Query: 194 TIPVS 198
+ S
Sbjct: 217 KLLTS 221
Score = 40.0 bits (92), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 564 ITILTNGPLTNLA-QIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFL 622
IT+ GP TNLA +I + + I++V ++GG GN+ V AEFN++
Sbjct: 141 ITVAMLGPQTNLALALIQRPSIAKGIKEVVVMGGAH---FNGGNITPV-----AEFNLYA 192
Query: 623 DPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKL 658
DP AA+ V S +++ +PL + ++ + L +L
Sbjct: 193 DPHAAEVVLASGVQLTYLPLDVTHKLLTSNARLKQL 228
>gi|119167454|ref|NP_248833.2| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa PAO1]
gi|421514755|ref|ZP_15961441.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa
PAO579]
gi|28416300|gb|AAG03533.2|AE004452_5 nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa PAO1]
gi|404348483|gb|EJZ74820.1| nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa
PAO579]
Length = 350
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 63/136 (46%), Gaps = 24/136 (17%)
Query: 78 PLRQPTAQQVLINAISAGP---ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
PL + A LI + A P +T+ ++G TN A+ L P + K + I +MGGA
Sbjct: 136 PLAEGNAVDYLIRTLRAAPEKSVTLAMLGPETNLALALTQAPDIVKGVREIVIMGGA--- 192
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKT 194
FN N + P AEFNIF+DP AA VL SG P+T++PLD T
Sbjct: 193 -HFNGGNIT-----------------PAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHK 234
Query: 195 IPVSENFFVEFERRQN 210
I S + N
Sbjct: 235 ILTSPERIAKLRNLGN 250
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 62/124 (50%), Gaps = 12/124 (9%)
Query: 541 ELRQPLA----VDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGG 596
E +QPLA VD + + P +T+ GP TNLA + L + +++ V +
Sbjct: 132 EPKQPLAEGNAVDYLIRTLRA-APEKSVTLAMLGPETNLA--LALTQAPDIVKGVREIVI 188
Query: 597 NKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILH 656
G GN+ + AEFN+F DP AA+ V +S I ++PL + ++ + + +
Sbjct: 189 MGGAHFNGGNI-----TPAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHKILTSPERIA 243
Query: 657 KLRD 660
KLR+
Sbjct: 244 KLRN 247
>gi|421531326|ref|ZP_15977744.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas putida
S11]
gi|402211220|gb|EJT82699.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas putida
S11]
Length = 342
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 65/126 (51%), Gaps = 24/126 (19%)
Query: 77 APLRQPTAQQVLINAISAG---PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIR 133
APL Q A Q L++ + A IT+ ++G TN A+ L+ P + K I+ + VMGGA
Sbjct: 127 APLAQGNAVQYLVDTLGAAKPHSITIAMLGPQTNLALALIQRPDIAKGIKQVVVMGGA-- 184
Query: 134 SDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
FN N + P AEFN+++DP AA VL SG+ +T +PLD T
Sbjct: 185 --HFNGGNIT-----------------PAAEFNLYADPHAAEVVLASGVQLTYLPLDVTH 225
Query: 194 TIPVSE 199
+ S+
Sbjct: 226 KLLTSD 231
Score = 42.7 bits (99), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 100/251 (39%), Gaps = 48/251 (19%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
++ D D A D +AL + P EL N++ I + T GR+DIP
Sbjct: 34 LIIDTDPGADDVVALFLAMASPDEL-NIRAITTVAGNVRLEKTSRNARLAREWAGREDIP 92
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V G P + YA + G GF G+ P++P
Sbjct: 93 VYAG---------AARPLVRKPIYAAEVH-GEEGFT------GIQVHEPKAP-------- 128
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLA-QIIGLQNSSSV 587
L Q AV + + +P S ITI GP TNLA +I + +
Sbjct: 129 -------------LAQGNAVQYLVDTLGAAKPHS-ITIAMLGPQTNLALALIQRPDIAKG 174
Query: 588 IQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
I+ V ++GG GN+ + AEFN++ DP AA+ V S +++ +PL + +
Sbjct: 175 IKQVVVMGGAH---FNGGNI-----TPAAEFNLYADPHAAEVVLASGVQLTYLPLDVTHK 226
Query: 648 VASFFKILHKL 658
+ + L +L
Sbjct: 227 LLTSDARLKQL 237
>gi|406989623|gb|EKE09391.1| hypothetical protein ACD_16C00189G0016 [uncultured bacterium]
Length = 325
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 63/141 (44%), Gaps = 28/141 (19%)
Query: 72 GGRKYAPLRQPTAQQVLINAI------SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHI 125
GG K P P Q +N S IT+ G TN A + P +K+ IE +
Sbjct: 97 GGCKLPPPTLPLQSQNAVNYFIETLLNSPTKITIAASGCLTNLACAFIMEPRIKEKIEKL 156
Query: 126 YVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVT 185
+MGG+I IGN+ P AEFN ++DP AAY V SG+P+
Sbjct: 157 VIMGGSI-----------------GIGNI-----TPAAEFNFYTDPQAAYVVFTSGVPIV 194
Query: 186 IIPLDATKTIPVSENFFVEFE 206
+I LD T+ SE + E E
Sbjct: 195 MIGLDTTRKTQTSEKWLAEIE 215
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 63/134 (47%), Gaps = 21/134 (15%)
Query: 562 SKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNM 620
+KITI +G LTNLA ++ I+ + I+GG+ G GN+ + AEFN
Sbjct: 126 TKITIAASGCLTNLACAFIMEPRIKEKIEKLVIMGGSIGI----GNI-----TPAAEFNF 176
Query: 621 FLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTL 680
+ DP AA VF S + I +I L R+ + K L ++ + S SQ ++ L
Sbjct: 177 YTDPQAAYVVFTSGVPIVMIGLDTTRKTQTSEKWLAEI----EALGSPVSQAVIDML--- 229
Query: 681 QQSHHSYHHVDTFL 694
YH D FL
Sbjct: 230 ----SYYHRPDAFL 239
>gi|170721146|ref|YP_001748834.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas putida
W619]
gi|169759149|gb|ACA72465.1| Inosine/uridine-preferring nucleoside hydrolase [Pseudomonas putida
W619]
Length = 335
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 66/136 (48%), Gaps = 24/136 (17%)
Query: 78 PLRQPTAQQVLINAISAG---PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
PL A Q L++ + A ITV ++G TN A+ L+ P + K I+ + VMGGA
Sbjct: 121 PLAPGNAVQYLVDTLGAAEPRSITVAMLGPQTNLALALIQRPDIAKGIKEVVVMGGA--- 177
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKT 194
FN N + P AEFN+++DP AA VL SG+P+T +PLD T
Sbjct: 178 -HFNGGNIT-----------------PAAEFNLYADPHAAEVVLASGVPLTYLPLDVTHK 219
Query: 195 IPVSENFFVEFERRQN 210
+ S+ + N
Sbjct: 220 LLTSDARLKQLAAVNN 235
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 103/253 (40%), Gaps = 48/253 (18%)
Query: 407 KPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDD 466
+ ++ D D A D +AL + P EL N++ I + T GR+D
Sbjct: 25 RDLIIDTDPGADDVVALFLAMASPGEL-NIRAITTVAGNVRLDKTSRNARLAREWAGRED 83
Query: 467 IPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAE 526
IPV G G +A P+ + + L G+ P+ P
Sbjct: 84 IPVYAG---------------AGRPLVRA-PIYAAEVHGEEGLTGVPVHEPKKP--LAPG 125
Query: 527 NSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLA-QIIGLQNSS 585
N+V++ VD + + EP S IT+ GP TNLA +I + +
Sbjct: 126 NAVQY---------------LVDT----LGAAEPRS-ITVAMLGPQTNLALALIQRPDIA 165
Query: 586 SVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQ 645
I++V ++GG GN+ + AEFN++ DP AA+ V S + + +PL +
Sbjct: 166 KGIKEVVVMGGAH---FNGGNI-----TPAAEFNLYADPHAAEVVLASGVPLTYLPLDVT 217
Query: 646 RRVASFFKILHKL 658
++ + L +L
Sbjct: 218 HKLLTSDARLKQL 230
>gi|325276818|ref|ZP_08142519.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas sp.
TJI-51]
gi|324098056|gb|EGB96201.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas sp.
TJI-51]
Length = 322
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 65/126 (51%), Gaps = 24/126 (19%)
Query: 77 APLRQPTAQQVLINAISAG---PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIR 133
APL A Q L++ ++A ITV ++G TN A+ L+ P + K I+ + VMGGA
Sbjct: 107 APLAAGNAVQYLVDTLAAAKPHSITVAMLGPQTNLALALIQRPEIAKGIKEVVVMGGA-- 164
Query: 134 SDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
FN N + P AEFN+++DP AA VL SG+ +T +PLD T
Sbjct: 165 --HFNGGNIT-----------------PAAEFNLYADPHAAQVVLASGVQLTYLPLDVTH 205
Query: 194 TIPVSE 199
+ S+
Sbjct: 206 KLLTSD 211
Score = 43.5 bits (101), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 104/251 (41%), Gaps = 48/251 (19%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
++ D D A D +AL L P EL N++ I + T GR+DIP
Sbjct: 14 LIIDTDPGADDVVALFLALASPEEL-NVRAITTVAGNVRLDKTSRNARLAREWAGREDIP 72
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V G G +A P+ + + L G+ P++P A N+
Sbjct: 73 VYAG---------------AGRPLVRA-PVYAAEVHGEEGLAGVQVHEPKAP--LAAGNA 114
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLA-QIIGLQNSSSV 587
V++ VD + + +P S IT+ GP TNLA +I +
Sbjct: 115 VQY---------------LVDT----LAAAKPHS-ITVAMLGPQTNLALALIQRPEIAKG 154
Query: 588 IQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
I++V ++GG GN+ + AEFN++ DP AA+ V S +++ +PL + +
Sbjct: 155 IKEVVVMGGAH---FNGGNI-----TPAAEFNLYADPHAAQVVLASGVQLTYLPLDVTHK 206
Query: 648 VASFFKILHKL 658
+ + L +L
Sbjct: 207 LLTSDARLQQL 217
>gi|431801944|ref|YP_007228847.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas putida
HB3267]
gi|430792709|gb|AGA72904.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas putida
HB3267]
Length = 322
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 69/137 (50%), Gaps = 24/137 (17%)
Query: 77 APLRQPTAQQVLINAI-SAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIR 133
APL Q A Q L++ + +A P IT+ ++G TN A+ L+ P + K I+ + VMGGA
Sbjct: 107 APLAQGNAVQYLVDTLGTAKPHSITIAMLGPQTNLALALIQRPDIAKGIKQVVVMGGA-- 164
Query: 134 SDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
FN N + P AEFN+++DP AA VL SG+ +T +PLD T
Sbjct: 165 --HFNGGNIT-----------------PAAEFNLYADPHAAEVVLASGVQLTYLPLDVTH 205
Query: 194 TIPVSENFFVEFERRQN 210
+ S+ + N
Sbjct: 206 KLLTSDARLKQLAAVNN 222
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 100/251 (39%), Gaps = 48/251 (19%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
++ D D A D +AL + P EL N++ I + T GR+DIP
Sbjct: 14 LIIDTDPGADDVVALFLAMASPDEL-NIRAITTVAGNVRLEKTSRNARLAREWAGREDIP 72
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V +A G + P+ + + L G+ P++P
Sbjct: 73 V-----YA-----------GAARPLVRKPIYAAEVHGEEGLTGIQVHEPKAP-------- 108
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLA-QIIGLQNSSSV 587
L Q AV + + +P S ITI GP TNLA +I + +
Sbjct: 109 -------------LAQGNAVQYLVDTLGTAKPHS-ITIAMLGPQTNLALALIQRPDIAKG 154
Query: 588 IQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
I+ V ++GG GN+ + AEFN++ DP AA+ V S +++ +PL + +
Sbjct: 155 IKQVVVMGGAH---FNGGNI-----TPAAEFNLYADPHAAEVVLASGVQLTYLPLDVTHK 206
Query: 648 VASFFKILHKL 658
+ + L +L
Sbjct: 207 LLTSDARLKQL 217
>gi|420239273|ref|ZP_14743608.1| Inosine-uridine nucleoside N-ribohydrolase [Rhizobium sp. CF080]
gi|398081550|gb|EJL72326.1| Inosine-uridine nucleoside N-ribohydrolase [Rhizobium sp. CF080]
Length = 319
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 75/183 (40%), Gaps = 33/183 (18%)
Query: 63 GLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP-----ITVFVMGSHTNFAIFLMNNPH 117
GL LP+ + P +A LI+ ++A ITV +G TN A+ L NP
Sbjct: 86 GLGNTVLPEPVKTVEP---KSAVDFLIDTLTAAALEKKRITVCCLGPMTNLAVALRMNPQ 142
Query: 118 LKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTV 177
+ + IE I +MGGA R P + AEFN+ +DP AA+ V
Sbjct: 143 VAEGIERIVMMGGAYRE---------------------PGNRTMTAEFNVLADPHAAHVV 181
Query: 178 LHSGIPVTIIPLDATKTIPVSENFFVEFE----RRQNTYEAQYCFQSLKMIRDTWSGSPP 233
SGIP+ + LDAT + + EF R T F +R S P
Sbjct: 182 FSSGIPIVALALDATHQVMLKPEHVAEFSNVSGRISQTLAELMAFWDRNDVRRYGSRGGP 241
Query: 234 FHE 236
H+
Sbjct: 242 LHD 244
>gi|26989183|ref|NP_744608.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas putida
KT2440]
gi|24984022|gb|AAN68072.1|AE016439_7 inosine-uridine preferring nucleoside hydrolase [Pseudomonas putida
KT2440]
Length = 322
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 64/125 (51%), Gaps = 24/125 (19%)
Query: 77 APLRQPTAQQVLINAISAG---PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIR 133
APL Q A Q L++ + A ITV ++G TN A+ L+ P + K I+ + VMGGA
Sbjct: 107 APLAQGNAVQYLVDTLGAAEPHSITVAMLGPQTNLALALIQRPSIVKGIKEVVVMGGA-- 164
Query: 134 SDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
FN N + P AEFN+++DP AA VL SG+ +T +PLD T
Sbjct: 165 --HFNGGNIT-----------------PVAEFNLYADPHAAEVVLASGVQLTYLPLDVTH 205
Query: 194 TIPVS 198
+ S
Sbjct: 206 KLLTS 210
Score = 42.4 bits (98), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 102/252 (40%), Gaps = 50/252 (19%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
++ D D A D +AL + P EL +++ I + T GR+DIP
Sbjct: 14 LIIDTDPGADDVVALFLAMASPHEL-SIRAITTVAGNVRLDKTSRNARLAREWAGREDIP 72
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V +A G + P+ + + L G+ P++P
Sbjct: 73 V-----YA-----------GAGRPLVRTPIYAADVHGEEGLTGVQVHEPKAP-------- 108
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSV- 587
L Q AV + + EP S IT+ GP TNLA + +Q S V
Sbjct: 109 -------------LAQGNAVQYLVDTLGAAEPHS-ITVAMLGPQTNLALAL-IQRPSIVK 153
Query: 588 -IQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQR 646
I++V ++GG GN+ V AEFN++ DP AA+ V S +++ +PL +
Sbjct: 154 GIKEVVVMGGAH---FNGGNITPV-----AEFNLYADPHAAEVVLASGVQLTYLPLDVTH 205
Query: 647 RVASFFKILHKL 658
++ + L +L
Sbjct: 206 KLLTSNARLKQL 217
>gi|349688650|ref|ZP_08899792.1| nucleoside hydrolase [Gluconacetobacter oboediens 174Bp2]
Length = 315
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 68/149 (45%), Gaps = 26/149 (17%)
Query: 89 INAISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQC 148
I A AG ITV +G TN A+ L+ P + + +E + MGGA S+C N T
Sbjct: 115 IRAHPAGTITVVTLGPMTNLAMALVKAPDIAQRVEQVVAMGGAY-SECGNIT-------- 165
Query: 149 DSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFE-- 206
P AEFN+F+DP AA VLH IP+T++PLD T V+ +
Sbjct: 166 ------------PNAEFNMFADPDAADIVLHGQIPLTLLPLDVTHQFLVTPPRLAQLRAM 213
Query: 207 --RRQNTYEAQYCF-QSLKMIRDTWSGSP 232
R + F + + + W G+P
Sbjct: 214 PGRCAQAAASMLGFSERFDLKKYGWDGAP 242
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 74/161 (45%), Gaps = 18/161 (11%)
Query: 505 DSDTLYGLARDLPRSPRRYTAENSVRFGASQDNDDPELRQP-LAVDVWKSI---VESIE- 559
D G AR L R P TAE+ D P L P +A+ + +++I
Sbjct: 63 DIKVYAGCARPLRRPP--ITAEH---VHGQSGMDGPVLPAPTIALQAQHGVDFLIDTIRA 117
Query: 560 -PGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEF 618
P IT++T GP+TNLA + L + + Q V V G +E GN+ + AEF
Sbjct: 118 HPAGTITVVTLGPMTNLA--MALVKAPDIAQRVEQVVAMGGAYSECGNI-----TPNAEF 170
Query: 619 NMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLR 659
NMF DP AA V ++ + L+PL + + L +LR
Sbjct: 171 NMFADPDAADIVLHGQIPLTLLPLDVTHQFLVTPPRLAQLR 211
>gi|411120556|ref|ZP_11392928.1| Inosine-uridine nucleoside N-ribohydrolase [Oscillatoriales
cyanobacterium JSC-12]
gi|410709225|gb|EKQ66740.1| Inosine-uridine nucleoside N-ribohydrolase [Oscillatoriales
cyanobacterium JSC-12]
Length = 312
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 62/120 (51%), Gaps = 24/120 (20%)
Query: 78 PLRQPTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSD 135
PL+ A + LI +S+ P +T+ +G TN A+ L+ P + I+ + +MGGA+
Sbjct: 100 PLQTEHAVEFLIRCLSSAPKPVTLATLGPLTNLAVALIQQPAIADRIQEVVIMGGAVTH- 158
Query: 136 CFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTI 195
GN+ P AEFNI+ DP AA VL SG+P+T+IPLD T +
Sbjct: 159 ----------------GNI-----TPSAEFNIYVDPHAAQVVLRSGLPLTLIPLDVTHQV 197
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 104/249 (41%), Gaps = 52/249 (20%)
Query: 404 LMGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMG 463
+ KP++ D D A D +AL L P +L NL GI + T L + G
Sbjct: 1 MAAKPIIVDCDPGADDAIALFLALAFPDQL-NLIGITTVAGNVPLLLTQTNARKLCDLTG 59
Query: 464 RDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDT-LYGLARDLPRSPRR 522
R +IPV GC PL + + T L G+ +LP
Sbjct: 60 RGNIPV-----------------FAGCPRPLLRPLITAEEVHGKTGLDGI--NLPSPTVP 100
Query: 523 YTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ 582
E++V F + + + + +P +T+ T GPLTNLA + Q
Sbjct: 101 LQTEHAVEF------------------LIRCLSSAPKP---VTLATLGPLTNLAVALIQQ 139
Query: 583 NS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
+ + IQ+V I+GG N PS AEFN+++DP AA+ V S L + LIP
Sbjct: 140 PAIADRIQEVVIMGGAVTHGN------ITPS---AEFNIYVDPHAAQVVLRSGLPLTLIP 190
Query: 642 LHMQRRVAS 650
L + +V +
Sbjct: 191 LDVTHQVIA 199
>gi|147852557|emb|CAN82748.1| hypothetical protein VITISV_037090 [Vitis vinifera]
Length = 204
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/36 (88%), Positives = 33/36 (91%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQ 36
MM RDDIPVGVGGEGGILPNGT LP+VGGY PIIDQ
Sbjct: 94 MMGRDDIPVGVGGEGGILPNGTFLPNVGGYLPIIDQ 129
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 407 KPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSAT-VDVVYDLLHMMGRD 465
+ ++ D D+ DF +L YLLK NL+ I +S+ GW S ++ +YDLL MMGRD
Sbjct: 39 RRILMDTDVDMDDFFSLFYLLKENTSEFNLEAITLSANGWCDSGHGINHIYDLLFMMGRD 98
Query: 466 DIPVGLGDVFAVGEVNPKFPPIGG 489
DIPVG+G + P +GG
Sbjct: 99 DIPVGVGGEGGILPNGTFLPNVGG 122
>gi|104781101|ref|YP_607599.1| inosine-uridine preferring nucleoside hydrolase [Pseudomonas
entomophila L48]
gi|95110088|emb|CAK14793.1| putative inosine-uridine preferring nucleoside hydrolase
[Pseudomonas entomophila L48]
Length = 336
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 63/125 (50%), Gaps = 24/125 (19%)
Query: 78 PLRQPTAQQVLINAISAG---PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
PL + A Q LI+ + A IT+ ++G TN A+ L+ P + I+ + VMGGA
Sbjct: 122 PLAKGNAVQYLIDTLGAAEPKSITIAMLGPQTNLALALIQKPEIVNGIKEVVVMGGA--- 178
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKT 194
FN N + P AEFN+F+DP AA VL SG+ +T +PLD T
Sbjct: 179 -HFNGGNIT-----------------PAAEFNLFADPHAAEVVLASGVKLTYLPLDVTHK 220
Query: 195 IPVSE 199
+ SE
Sbjct: 221 VLTSE 225
Score = 42.4 bits (98), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 63/124 (50%), Gaps = 16/124 (12%)
Query: 541 ELRQPLA----VDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSV--IQDVYIV 594
E ++PLA V + + EP S ITI GP TNLA + +Q V I++V ++
Sbjct: 118 EPKKPLAKGNAVQYLIDTLGAAEPKS-ITIAMLGPQTNLALAL-IQKPEIVNGIKEVVVM 175
Query: 595 GGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKI 654
GG GN+ + AEFN+F DP AA+ V S +++ +PL + +V +
Sbjct: 176 GG---AHFNGGNI-----TPAAEFNLFADPHAAEVVLASGVKLTYLPLDVTHKVLTSEAR 227
Query: 655 LHKL 658
L +L
Sbjct: 228 LKQL 231
>gi|310644536|ref|YP_003949295.1| inosine-uridine preferring nucleoside hydrolase [Paenibacillus
polymyxa SC2]
gi|309249487|gb|ADO59054.1| Inosine-uridine preferring nucleoside hydrolase family protein
[Paenibacillus polymyxa SC2]
gi|392305208|emb|CCI71571.1| inosine-uridine preferring nucleoside hydrolase family protein
[Paenibacillus polymyxa M1]
Length = 318
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 102/248 (41%), Gaps = 40/248 (16%)
Query: 9 VGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAG-------ECRYRQAIPVGQRLYVNTN 61
V + G I +G + P + IID+ G R + P RL+ +
Sbjct: 29 VHLTGVSVIPADGYLEPATDASRKIIDRFGQNKGPVEVAKSNSRGKNPFPAAWRLH--SF 86
Query: 62 YGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLK 119
Y L + GR APL A Q LI + + G + G T+ A L P ++
Sbjct: 87 YVDALPVLNESGRMEAPLSSLPAHQHLIEKVRGAEGKTLLLFTGPLTDLARALDEAPDIE 146
Query: 120 KNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLH 179
IE + MGG GN+ + + AE+N+F DP AAY V
Sbjct: 147 AKIEKLVWMGGTFEK-----------------GNVEEPEHDGTAEWNVFWDPEAAYRVWQ 189
Query: 180 SGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPF----- 234
SGI + ++ L++T +P++ +N + A+ ++ + + + ++G PP
Sbjct: 190 SGITIDLVALESTSKVPLTPAV-------RNRWAAERRYEGVDFLGNCYAGCPPLVYSET 242
Query: 235 HEAYCMWD 242
+ Y +WD
Sbjct: 243 NSTYYLWD 250
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 563 KITILTNGPLTNLAQIIG-LQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMF 621
K +L GPLT+LA+ + + + I+ + +GG EKGNV AE+N+F
Sbjct: 123 KTLLLFTGPLTDLARALDEAPDIEAKIEKLVWMGGT----FEKGNVEEPEHDGTAEWNVF 178
Query: 622 LDPLAAKAVFESKLEIKLIPLHMQRRV 648
DP AA V++S + I L+ L +V
Sbjct: 179 WDPEAAYRVWQSGITIDLVALESTSKV 205
>gi|219850085|ref|YP_002464518.1| inosine/uridine-preferring nucleoside hydrolase [Chloroflexus
aggregans DSM 9485]
gi|219544344|gb|ACL26082.1| Inosine/uridine-preferring nucleoside hydrolase [Chloroflexus
aggregans DSM 9485]
Length = 319
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 78/174 (44%), Gaps = 47/174 (27%)
Query: 63 GLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKK 120
GL A LP + AP A +I+ + A P +T+ +G TN A+ L P L
Sbjct: 89 GLGYAHLPTATIQPAPGH---AVDFIIDTVLAAPGDVTLVAVGPLTNVALALRKEPRLAG 145
Query: 121 NIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHS 180
+ I +MGGA+R+D GN+ P AEFN+F+DP AA V +
Sbjct: 146 ALREIVMMGGALRAD----------------GNV-----TPRAEFNVFADPHAAQIVFSA 184
Query: 181 GIPVTIIPLDATKTIPVSEN---------------------FFVEFERRQNTYE 213
G+P+ I+P D T+ + + E+ F++EF RR Y+
Sbjct: 185 GVPLVIMPWDITRLVRLHESEVQRLAASGKPIGQFIADATRFYIEFHRRYFGYD 238
Score = 43.9 bits (102), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 12/108 (11%)
Query: 544 QPLAVDVWKSIVESI--EPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQ 600
QP I++++ PG +T++ GPLTN+A + + + ++++ ++GG
Sbjct: 101 QPAPGHAVDFIIDTVLAAPG-DVTLVAVGPLTNVALALRKEPRLAGALREIVMMGGALRA 159
Query: 601 DNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
D GNV + AEFN+F DP AA+ VF + + + ++P + R V
Sbjct: 160 D---GNV-----TPRAEFNVFADPHAAQIVFSAGVPLVIMPWDITRLV 199
>gi|330837068|ref|YP_004411709.1| ribosylpyrimidine nucleosidase [Sphaerochaeta coccoides DSM 17374]
gi|329748971|gb|AEC02327.1| Ribosylpyrimidine nucleosidase [Sphaerochaeta coccoides DSM 17374]
Length = 343
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 22/123 (17%)
Query: 95 GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNL 154
G IT+ +G T+ A+ L+ P LK + HI MGG++ +GN
Sbjct: 154 GEITIVALGPLTDIALALILEPRLKDAVRHIVTMGGSM-----------------GMGN- 195
Query: 155 YPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEA 214
+ P AEFNI++DP AAY V SG+P+T+ LD T + + ++ + + +
Sbjct: 196 ----ATPSAEFNIYADPEAAYVVCSSGVPLTMFTLDVTLQVTLDDDMLSHYRKMKTKTST 251
Query: 215 QYC 217
+C
Sbjct: 252 MFC 254
Score = 42.7 bits (99), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 62/125 (49%), Gaps = 13/125 (10%)
Query: 550 VWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEKGNVF 608
+ ++++E+ PG +ITI+ GPLT++A + L+ ++ + +GG+ G N
Sbjct: 145 IIRTVMEN--PG-EITIVALGPLTDIALALILEPRLKDAVRHIVTMGGSMGMGN------ 195
Query: 609 TVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESV 668
++ AEFN++ DP AA V S + + + L + +V +L R K ++
Sbjct: 196 ---ATPSAEFNIYADPEAAYVVCSSGVPLTMFTLDVTLQVTLDDDMLSHYRKMKTKTSTM 252
Query: 669 FSQRL 673
F +
Sbjct: 253 FCDSM 257
>gi|58039411|ref|YP_191375.1| inosine-uridine preferring nucleoside hydrolase [Gluconobacter
oxydans 621H]
gi|58001825|gb|AAW60719.1| Inosine-uridine preferring nucleoside hydrolase [Gluconobacter
oxydans 621H]
Length = 322
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 68/152 (44%), Gaps = 22/152 (14%)
Query: 41 AGECRYRQAIPVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVF 100
AG R P+ +V+ G+ A LP+ + + T L+ G IT+
Sbjct: 75 AGAARPLHRAPISAE-HVHGETGMAGADLPEPTLRPQAIDAATWLVDLLRREPEGAITLV 133
Query: 101 VMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSN 160
+G TN A+ L + P + I + MGGA R GN+
Sbjct: 134 CLGPMTNLALALTHAPDIASRIAGVVAMGGAQREG----------------GNI-----T 172
Query: 161 PYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
P AEFN F DP AA V+HSGIP+T++PLD T
Sbjct: 173 PTAEFNFFVDPHAARIVMHSGIPITLLPLDVT 204
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 71/149 (47%), Gaps = 10/149 (6%)
Query: 501 GGFLDSDTLYGLARDLPRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESI-- 558
G D G AR L R+P + A D +P LR P A+D +V+ +
Sbjct: 66 AGRTDIPVFAGAARPLHRAPISAEHVHGETGMAGADLPEPTLR-PQAIDAATWLVDLLRR 124
Query: 559 EPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEF 618
EP IT++ GP+TNLA + L ++ + + V G E GN+ + AEF
Sbjct: 125 EPEGAITLVCLGPMTNLA--LALTHAPDIASRIAGVVAMGGAQREGGNI-----TPTAEF 177
Query: 619 NMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
N F+DP AA+ V S + I L+PL + R
Sbjct: 178 NFFVDPHAARIVMHSGIPITLLPLDVTHR 206
>gi|404398136|ref|ZP_10989720.1| pyrimidine-specific ribonucleoside hydrolase RihA [Pseudomonas
fuscovaginae UPB0736]
Length = 342
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 65/126 (51%), Gaps = 24/126 (19%)
Query: 77 APLRQPTAQQVLINAISAG---PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIR 133
APL + A LI+ + A IT+ ++G TN A+ L+ +P + + I+ + VMGGA
Sbjct: 127 APLAKGNAVNYLIDTLRAAKPHSITIAMLGPQTNLALALIQDPEITQGIKEVVVMGGA-- 184
Query: 134 SDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
FN N + P AEFN+F+DP AA VL SG+ +T +PLD T
Sbjct: 185 --HFNGGNIT-----------------PVAEFNLFADPQAAEVVLKSGVKLTYLPLDVTH 225
Query: 194 TIPVSE 199
I S+
Sbjct: 226 KILTSD 231
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 48/251 (19%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
++ D D A D +AL++ L P EL N++ + + T GR+++P
Sbjct: 34 LIIDTDPGADDVVALLFALASPEEL-NIRALTTVAGNVRLDKTSRNARLAREWAGREEVP 92
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V G P+ P + YA+ I G + G+ P++P
Sbjct: 93 VYAG--------APR-PLLRTPIYAENIHGKEG-------ISGVTVHEPKAP-------- 128
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLA-QIIGLQNSSSV 587
L + AV+ + + +P S ITI GP TNLA +I +
Sbjct: 129 -------------LAKGNAVNYLIDTLRAAKPHS-ITIAMLGPQTNLALALIQDPEITQG 174
Query: 588 IQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
I++V ++GG GN+ V AEFN+F DP AA+ V +S +++ +PL + +
Sbjct: 175 IKEVVVMGG---AHFNGGNITPV-----AEFNLFADPQAAEVVLKSGVKLTYLPLDVTHK 226
Query: 648 VASFFKILHKL 658
+ + + L K+
Sbjct: 227 ILTSDERLKKI 237
>gi|308071302|ref|YP_003872907.1| inosine-uridine nucleoside N-ribohydrolase [Paenibacillus polymyxa
E681]
gi|305860581|gb|ADM72369.1| Inosine-uridine nucleoside N-ribohydrolase [Paenibacillus polymyxa
E681]
Length = 318
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 102/248 (41%), Gaps = 40/248 (16%)
Query: 9 VGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAG-------ECRYRQAIPVGQRLYVNTN 61
V + G I +G + P + IID+ G R + P RL+ +
Sbjct: 29 VHLTGVSVIPADGYLEPATDASRKIIDRFGQNKGPVEVAKSNSRGKNPFPAAWRLH--SF 86
Query: 62 YGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLK 119
Y L + GR APL A Q LI + + G + G T+ A L P ++
Sbjct: 87 YVDALPVLNESGRMEAPLSSLPAHQHLIEKVRGAEGKTLLLFTGPLTDLARALDEAPDIE 146
Query: 120 KNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLH 179
IE + MGG GN+ + + AE+N+F DP AAY V
Sbjct: 147 AKIEKLVWMGGTFEK-----------------GNVEEPEHDGTAEWNVFWDPEAAYRVWQ 189
Query: 180 SGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPF----- 234
SGI + ++ L++T +P++ +N + A+ ++ + + + ++G PP
Sbjct: 190 SGITIDLVALESTSKVPLTPAV-------RNRWAAERRYEGVDFLGNCYAGCPPLVYSET 242
Query: 235 HEAYCMWD 242
+ Y +WD
Sbjct: 243 NSTYYLWD 250
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 563 KITILTNGPLTNLAQIIG-LQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMF 621
K +L GPLT+LA+ + + + I+ + +GG EKGNV AE+N+F
Sbjct: 123 KTLLLFTGPLTDLARALDEAPDIEAKIEKLVWMGGT----FEKGNVEEPEHDGTAEWNVF 178
Query: 622 LDPLAAKAVFESKLEIKLIPLHMQRRV 648
DP AA V++S + I L+ L +V
Sbjct: 179 WDPEAAYRVWQSGITIDLVALESTSKV 205
>gi|434399530|ref|YP_007133534.1| Inosine/uridine-preferring nucleoside hydrolase [Stanieria
cyanosphaera PCC 7437]
gi|428270627|gb|AFZ36568.1| Inosine/uridine-preferring nucleoside hydrolase [Stanieria
cyanosphaera PCC 7437]
Length = 309
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 154/366 (42%), Gaps = 67/366 (18%)
Query: 407 KPVVFDIDMSAGDFLALIYLLKLP-VELINLKGILVSSTGWATSATVDVVYDLLHMMGRD 465
K V+ D D + DFLA I LL + VE I GI+V+ A V V +L +MG+
Sbjct: 4 KLVLMDHDGAIDDFLATILLLTMAEVEPI---GIVVTPADCYPRAAVSVTRKILDLMGKS 60
Query: 466 DIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTA 525
I V V + P+F C P+ + +S R
Sbjct: 61 HISVAASTVRGINPFPPEFR--RDCTIIDNFPI--------------LNEPEQSESRLVT 104
Query: 526 ENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSK-ITILTNGPLTNLAQIIGLQ-N 583
E+ F IV ++ S+ ++++ GPLT LA+ I LQ
Sbjct: 105 ESGQEF----------------------IVNQLQAASQPVSLMVTGPLTTLAEAIILQPE 142
Query: 584 SSSVIQDVYIVGG--NKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
+ I+ + +GG G + EKG F + AE+N+F DP+AAK ++E+ + I L P
Sbjct: 143 IIAKIEAIIWMGGALTVGGNVEKG--FALEHDGSAEWNVFWDPIAAKKIWETSIAIILCP 200
Query: 642 LHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAV 701
L + V + +H L +++ P S L GL +Y+ D L
Sbjct: 201 LDLTNTVPVTPEFIHLLTKQRQYPLSD-----LAGLCYALAIPQTYYCWDILATAYL--- 252
Query: 702 ILGGNPHLNQTYKIKSLE--IISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAE 759
P Y +++ E II++G + G+ I+ Q G+ ++V+ ++ +YD+ +
Sbjct: 253 ---ARPEF---YHLETYETDIITEG--TSQGRTILKQ-GGRTIQVMTKVDKQRFYDYLLK 303
Query: 760 VLGDHK 765
L K
Sbjct: 304 QLKALK 309
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 22/135 (16%)
Query: 83 TAQQVLINAISAG--PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNST 140
+ Q+ ++N + A P+++ V G T A ++ P + IE I MGGA+
Sbjct: 106 SGQEFIVNQLQAASQPVSLMVTGPLTTLAEAIILQPEIIAKIEAIIWMGGALTVG----- 160
Query: 141 NSSQSEQCDSIGNL---YPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPV 197
GN+ + + + AE+N+F DP AA + + I + + PLD T T+PV
Sbjct: 161 -----------GNVEKGFALEHDGSAEWNVFWDPIAAKKIWETSIAIILCPLDLTNTVPV 209
Query: 198 SENFFVEFERRQNTY 212
+ F+ +Q Y
Sbjct: 210 TPE-FIHLLTKQRQY 223
>gi|421521791|ref|ZP_15968442.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas putida
LS46]
gi|402754399|gb|EJX14882.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas putida
LS46]
Length = 322
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 64/125 (51%), Gaps = 24/125 (19%)
Query: 77 APLRQPTAQQVLINAISAG---PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIR 133
APL Q A Q L++ +SA ITV ++G TN A+ L+ P + I+ + VMGGA
Sbjct: 107 APLAQGNAVQYLVDTLSAAKPHSITVAMLGPQTNLALALIQRPSIVNGIKEVVVMGGA-- 164
Query: 134 SDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
FN N + P AEFN+++DP AA VL SG+ +T +PLD T
Sbjct: 165 --HFNGGNIT-----------------PVAEFNLYADPHAAEVVLASGVQLTYLPLDVTH 205
Query: 194 TIPVS 198
+ S
Sbjct: 206 KLLTS 210
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 12/119 (10%)
Query: 542 LRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSV--IQDVYIVGGNKG 599
L Q AV + + +P S IT+ GP TNLA + +Q S V I++V ++GG
Sbjct: 109 LAQGNAVQYLVDTLSAAKPHS-ITVAMLGPQTNLALAL-IQRPSIVNGIKEVVVMGG--- 163
Query: 600 QDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKL 658
GN+ V AEFN++ DP AA+ V S +++ +PL + ++ + L +L
Sbjct: 164 AHFNGGNITPV-----AEFNLYADPHAAEVVLASGVQLTYLPLDVTHKLLTSNARLKQL 217
>gi|397696173|ref|YP_006534056.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas putida
DOT-T1E]
gi|397332903|gb|AFO49262.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas putida
DOT-T1E]
Length = 322
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 64/125 (51%), Gaps = 24/125 (19%)
Query: 77 APLRQPTAQQVLINAISAG---PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIR 133
APL Q A Q L++ +SA ITV ++G TN A+ L+ P + I+ + VMGGA
Sbjct: 107 APLAQGNAVQYLVDTLSAAKPHSITVAMLGPQTNLALALIQRPSIVNGIKEVVVMGGA-- 164
Query: 134 SDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
FN N + P AEFN+++DP AA VL SG+ +T +PLD T
Sbjct: 165 --HFNGGNIT-----------------PVAEFNLYADPHAAEVVLASGVQLTYLPLDVTH 205
Query: 194 TIPVS 198
+ S
Sbjct: 206 KLLTS 210
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 102/252 (40%), Gaps = 50/252 (19%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
++ D D A D +AL + P EL N++ I + T GR+DIP
Sbjct: 14 LIIDTDPGADDVVALFLAMASPNEL-NIRAITTVAGNVRLDKTSRNARLAREWAGREDIP 72
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V +A G + P+ + + L G+ P++P
Sbjct: 73 V-----YA-----------GAGRPLVRTPIYAADVHGEEGLTGVPVHEPKAP-------- 108
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSV- 587
L Q AV + + +P S IT+ GP TNLA + +Q S V
Sbjct: 109 -------------LAQGNAVQYLVDTLSAAKPHS-ITVAMLGPQTNLALAL-IQRPSIVN 153
Query: 588 -IQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQR 646
I++V ++GG GN+ V AEFN++ DP AA+ V S +++ +PL +
Sbjct: 154 GIKEVVVMGG---AHFNGGNITPV-----AEFNLYADPHAAEVVLASGVQLTYLPLDVTH 205
Query: 647 RVASFFKILHKL 658
++ + L +L
Sbjct: 206 KLLTSNARLKQL 217
>gi|410093693|ref|ZP_11290168.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
viridiflava UASWS0038]
gi|409758908|gb|EKN44160.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
viridiflava UASWS0038]
Length = 341
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 65/135 (48%), Gaps = 24/135 (17%)
Query: 79 LRQPTAQQVLINAIS-AGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSD 135
L Q A LI +S A P ITV ++G TN A+ L+ P + + I+ + VMGGA
Sbjct: 128 LAQGNAVDYLIQTLSKAKPHSITVAMLGPQTNLALALVQAPEITQGIKEVIVMGGA---- 183
Query: 136 CFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTI 195
FN N + P AEFNIF+DP AA VL SG+ +T +PLD T I
Sbjct: 184 HFNGGNIT-----------------PVAEFNIFADPHAAQIVLASGVKLTYVPLDVTHKI 226
Query: 196 PVSENFFVEFERRQN 210
SE + N
Sbjct: 227 LTSEKRLQQIAALNN 241
Score = 46.2 bits (108), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 101/252 (40%), Gaps = 46/252 (18%)
Query: 407 KPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDD 466
+ V+ D D A D +AL+ L P EL N+ I + T GR++
Sbjct: 31 RDVIIDTDPGADDVVALLLALASPEEL-NVMAITTVAGNVRLDKTSRNARLAREWAGREE 89
Query: 467 IPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAE 526
+PV G PK P + YA+ + G LP P A+
Sbjct: 90 VPVYAG--------APK-PLVRTPIYAENVHGKEG--------------LPGVPVHEPAK 126
Query: 527 NSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSS 586
G +Q N AVD + +P S IT+ GP TNLA + L +
Sbjct: 127 -----GLAQGN---------AVDYLIQTLSKAKPHS-ITVAMLGPQTNLA--LALVQAPE 169
Query: 587 VIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQR 646
+ Q + V G GN+ V AEFN+F DP AA+ V S +++ +PL +
Sbjct: 170 ITQGIKEVIVMGGAHFNGGNITPV-----AEFNIFADPHAAQIVLASGVKLTYVPLDVTH 224
Query: 647 RVASFFKILHKL 658
++ + K L ++
Sbjct: 225 KILTSEKRLQQI 236
>gi|402700401|ref|ZP_10848380.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas fragi
A22]
Length = 342
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 65/136 (47%), Gaps = 24/136 (17%)
Query: 79 LRQPTAQQVLINAISA---GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSD 135
L Q A LI+ + A G +T+ ++G TN A+ L+ P + K I+ + VMGGA
Sbjct: 129 LEQANAVNYLIDTLRAARPGSVTIAMLGPQTNLALALIQAPDITKGIKEVVVMGGA---- 184
Query: 136 CFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTI 195
FN N + P AEFNI++DP AA VL SG+ + +PLD T I
Sbjct: 185 HFNGGNIT-----------------PVAEFNIYADPHAADVVLKSGVKLVYVPLDVTHKI 227
Query: 196 PVSENFFVEFERRQNT 211
S+ + NT
Sbjct: 228 LTSDQRLKQIASLGNT 243
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 10/108 (9%)
Query: 542 LRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLA-QIIGLQNSSSVIQDVYIVGGNKGQ 600
L Q AV+ + + PGS +TI GP TNLA +I + + I++V ++GG
Sbjct: 129 LEQANAVNYLIDTLRAARPGS-VTIAMLGPQTNLALALIQAPDITKGIKEVVVMGG---A 184
Query: 601 DNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
GN+ V AEFN++ DP AA V +S +++ +PL + ++
Sbjct: 185 HFNGGNITPV-----AEFNIYADPHAADVVLKSGVKLVYVPLDVTHKI 227
>gi|148548438|ref|YP_001268540.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas putida
F1]
gi|148512496|gb|ABQ79356.1| Inosine/uridine-preferring nucleoside hydrolase [Pseudomonas putida
F1]
Length = 333
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 64/125 (51%), Gaps = 24/125 (19%)
Query: 77 APLRQPTAQQVLINAISAG---PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIR 133
APL Q A Q L++ +SA ITV ++G TN A+ L+ P + I+ + VMGGA
Sbjct: 118 APLAQGNAVQYLVDTLSAAKPHSITVAMLGPQTNLALALIQRPGIVNGIKEVVVMGGA-- 175
Query: 134 SDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
FN N + P AEFN+++DP AA VL SG+ +T +PLD T
Sbjct: 176 --HFNGGNIT-----------------PVAEFNLYADPHAAEVVLASGVQLTYLPLDVTH 216
Query: 194 TIPVS 198
+ S
Sbjct: 217 KLLTS 221
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 102/254 (40%), Gaps = 54/254 (21%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
++ D D A D +AL + P EL N++ I + + T GR+DIP
Sbjct: 25 LIIDTDPGADDVVALFLAMASPNEL-NIRAITTVAGNVRLNKTSRNARLAREWAGREDIP 83
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V +A G + P+ + + L G+ P++P
Sbjct: 84 V-----YA-----------GAGRPLVRTPIYAADVHGEEGLTGVPVHEPKAP-------- 119
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLA----QIIGLQNS 584
L Q AV + + +P S IT+ GP TNLA Q G+ N
Sbjct: 120 -------------LAQGNAVQYLVDTLSAAKPHS-ITVAMLGPQTNLALALIQRPGIVNG 165
Query: 585 SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHM 644
I++V ++GG GN+ V AEFN++ DP AA+ V S +++ +PL +
Sbjct: 166 ---IKEVVVMGG---AHFNGGNITPV-----AEFNLYADPHAAEVVLASGVQLTYLPLDV 214
Query: 645 QRRVASFFKILHKL 658
++ + L +L
Sbjct: 215 THKLLTSNARLKQL 228
>gi|319791545|ref|YP_004153185.1| inosine/uridine-preferring nucleoside hydrolase [Variovorax
paradoxus EPS]
gi|315594008|gb|ADU35074.1| Inosine/uridine-preferring nucleoside hydrolase [Variovorax
paradoxus EPS]
Length = 352
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 65/136 (47%), Gaps = 29/136 (21%)
Query: 66 KAFLPQGGRKYAPLRQPTAQQVLINAISAGP---ITVFVMGSHTNFAIFLMNNPHLKKNI 122
K F PQ PL A LI + A P +T+ ++G TN A+ L P + + +
Sbjct: 131 KVFEPQ-----QPLANGNAVDYLIRTLRAAPEKSVTLAMLGPETNLALALTQAPDIVRGL 185
Query: 123 EHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGI 182
+ +MGGA FN N + P AEFN+F+DP AA VL SG+
Sbjct: 186 RELVLMGGA----HFNGGNIT-----------------PTAEFNVFADPHAAEIVLKSGV 224
Query: 183 PVTIIPLDATKTIPVS 198
P+T++PLD T I S
Sbjct: 225 PITMLPLDVTHKILTS 240
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 12/123 (9%)
Query: 541 ELRQPLA----VDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGG 596
E +QPLA VD + + P +T+ GP TNLA + L + +++ + +
Sbjct: 134 EPQQPLANGNAVDYLIRTLRA-APEKSVTLAMLGPETNLA--LALTQAPDIVRGLRELVL 190
Query: 597 NKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILH 656
G GN+ + AEFN+F DP AA+ V +S + I ++PL + ++ + + +
Sbjct: 191 MGGAHFNGGNI-----TPTAEFNVFADPHAAEIVLKSGVPITMLPLDVTHKILTSPERIA 245
Query: 657 KLR 659
+LR
Sbjct: 246 RLR 248
>gi|375311132|ref|ZP_09776389.1| inosine-uridine preferring nucleoside hydrolase family protein
[Paenibacillus sp. Aloe-11]
gi|375076872|gb|EHS55123.1| inosine-uridine preferring nucleoside hydrolase family protein
[Paenibacillus sp. Aloe-11]
Length = 318
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 102/248 (41%), Gaps = 40/248 (16%)
Query: 9 VGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAG-------ECRYRQAIPVGQRLYVNTN 61
V + G I +G + P + IID+ G R + P R++ +
Sbjct: 29 VHLTGVSVIPADGYLEPATDASRKIIDRFGQNKGPVEVAKSNSRGKNPFPAAWRIH--SF 86
Query: 62 YGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLK 119
Y L + GR APL A Q LI + + G + G T+ A L P ++
Sbjct: 87 YVDALPVLNESGRMEAPLSSLPAHQHLIEKVRGAEGKTLLLFTGPLTDLARALDEAPDIE 146
Query: 120 KNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLH 179
IE + MGG GN+ + + AE+N+F DP AAY V
Sbjct: 147 AKIEKLVWMGGTFEK-----------------GNVEEPEHDGTAEWNVFWDPEAAYRVWQ 189
Query: 180 SGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPF----- 234
SGI + ++ L++T +P++ +N + A+ ++ + + + ++G PP
Sbjct: 190 SGITIDLVALESTSKVPLTPAV-------RNRWAAERRYEGVDFLGNCYAGCPPLVYSET 242
Query: 235 HEAYCMWD 242
+ Y +WD
Sbjct: 243 NSTYFLWD 250
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 563 KITILTNGPLTNLAQIIG-LQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMF 621
K +L GPLT+LA+ + + + I+ + +GG EKGNV AE+N+F
Sbjct: 123 KTLLLFTGPLTDLARALDEAPDIEAKIEKLVWMGGT----FEKGNVEEPEHDGTAEWNVF 178
Query: 622 LDPLAAKAVFESKLEIKLIPLHMQRRV 648
DP AA V++S + I L+ L +V
Sbjct: 179 WDPEAAYRVWQSGITIDLVALESTSKV 205
>gi|307152158|ref|YP_003887542.1| inosine/uridine-preferring nucleoside hydrolase [Cyanothece sp. PCC
7822]
gi|306982386|gb|ADN14267.1| Inosine/uridine-preferring nucleoside hydrolase [Cyanothece sp. PCC
7822]
Length = 374
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 132/295 (44%), Gaps = 56/295 (18%)
Query: 408 PVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR--- 464
P++FD D S AL YLL P ++K I + G A AT V + M+GR
Sbjct: 55 PLIFDDDGSQDGMTALSYLLANPK--FDIKAITLCQ-GIADPATF--VGNFERMLGRLGV 109
Query: 465 -DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRY 523
DIP+G+G A+ G Y + I G+ F + LP + Y
Sbjct: 110 STDIPLGIGRSEALS---------GHNTYPQFIRDGAVTF------WSPFVKLPETAPTY 154
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
+P A + ++I +S EP +TIL G LTN+A+ + L
Sbjct: 155 KT------------------KPAAKLIVETIKKSPEP---VTILATGSLTNIAEALRLD- 192
Query: 584 SSSVIQDVYIVGGNKGQDNEKGNVFTVP-----SSKYAEFNMFLDPLAAKAVF---ESKL 635
+I+++ ++ G GN+ VP ++K AEFN+++DP+AA+ VF E L
Sbjct: 193 -PGIIKNISVIEIMGGSVYLPGNLGVVPEPPFSTNKVAEFNIWVDPVAAQEVFKAGEKGL 251
Query: 636 EIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHV 690
+I+L PL + SF + + KTPES + L +T+ QS + + V
Sbjct: 252 KIQLTPLDATHEI-SFSREDQQAWLATKTPESEMAAEFLDFALTVIQSGNDPNPV 305
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 104/250 (41%), Gaps = 56/250 (22%)
Query: 69 LPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIY 126
LP+ Y + A ++++ I S P+T+ GS TN A L +P + KNI I
Sbjct: 147 LPETAPTY---KTKPAAKLIVETIKKSPEPVTILATGSLTNIAEALRLDPGIIKNISVIE 203
Query: 127 VMGGAIRSDCFNSTNSSQSEQCDSIGNL-----YPDDSNPYAEFNIFSDPFAAYTVLHS- 180
+MGG++ GNL P +N AEFNI+ DP AA V +
Sbjct: 204 IMGGSVYLP----------------GNLGVVPEPPFSTNKVAEFNIWVDPVAAQEVFKAG 247
Query: 181 --GIPVTIIPLDATKTIPVS---ENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPFH 235
G+ + + PLDAT I S + ++ + ++ A++ +L +I+ SG+ P
Sbjct: 248 EKGLKIQLTPLDATHEISFSREDQQAWLATKTPESEMAAEFLDFALTVIQ---SGNDP-- 302
Query: 236 EAYCMWD----------SFMAGVALSIMLNSSSHNGENACSEMEYMNLTVVTSNEPYGIS 285
+WD +F L + +++ + GEN T V N P I
Sbjct: 303 --NPVWDLVAAINLAEPNFSPETPLHLEVDTKTAPGEN-------QGQTYVVPNAPPNIY 353
Query: 286 DGSNPLIDGL 295
P D L
Sbjct: 354 VSLKPSFDNL 363
>gi|114762950|ref|ZP_01442380.1| putative nucleoside hydrolase [Pelagibaca bermudensis HTCC2601]
gi|114544274|gb|EAU47282.1| putative nucleoside hydrolase [Pelagibaca bermudensis HTCC2601]
Length = 323
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 21/97 (21%)
Query: 96 PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY 155
P+T+ +G TN A+ L +P + + IE I VMGGA R+ +G+
Sbjct: 121 PVTICAIGPLTNVAMALRLHPEVAQGIERIVVMGGAFRA----------------LGH-- 162
Query: 156 PDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
P+AEFN+++DP AA VL SG+P+T+ PLD T
Sbjct: 163 ---RTPWAEFNVYADPHAAQIVLGSGVPITMFPLDVT 196
Score = 46.2 bits (108), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 13/118 (11%)
Query: 561 GSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFN 619
G +TI GPLTN+A + L + I+ + ++GG + + +AEFN
Sbjct: 119 GRPVTICAIGPLTNVAMALRLHPEVAQGIERIVVMGGAFRALGHR--------TPWAEFN 170
Query: 620 MFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILH--KLRDRKKTPESVFSQRLLQ 675
++ DP AA+ V S + I + PL + + + F H +LR++ P ++ L +
Sbjct: 171 VYADPHAAQIVLGSGVPITMFPLDVT--LQALFTATHIEELREQGGAPGCALARLLTE 226
>gi|295396382|ref|ZP_06806546.1| possible ribosylpyrimidine nucleosidase [Brevibacterium mcbrellneri
ATCC 49030]
gi|294970769|gb|EFG46680.1| possible ribosylpyrimidine nucleosidase [Brevibacterium mcbrellneri
ATCC 49030]
Length = 329
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 83/187 (44%), Gaps = 31/187 (16%)
Query: 69 LPQGGRKYAPLRQPTAQQVLINAISAG--PITVFVMGSHTNFAIFLMNNPHLKKNIEHIY 126
LP+ RK P+ +P A + L +S P+T+ + TN A+ L P K+I+ I
Sbjct: 97 LPRSPRK--PVEEP-ATEFLYRVLSESSPPVTLIALAPLTNIALLLRAYPEAHKHIDRIV 153
Query: 127 VMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTI 186
MGGA R GN+ AEFN +SDP AA+ VLHSGIP+T+
Sbjct: 154 WMGGARR-----------------YGNV-----TASAEFNAWSDPEAAHEVLHSGIPITL 191
Query: 187 IPLDATKTIPVSENFFVEFERRQN-TYEAQYCFQSLKMIRDTWSGSPPFHEAYCMWDSFM 245
L+ T+ VS E+ ++ + R+ P H A C+ D
Sbjct: 192 YALEPFYTVTVSSQRVAEYTSAEDPRIRTIGEMLTYSQTRNAGETRIPDHTASCLGD--- 248
Query: 246 AGVALSI 252
AG +S+
Sbjct: 249 AGAVMSV 255
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 136/338 (40%), Gaps = 66/338 (19%)
Query: 406 GKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRD 465
P + D+D D AL++ P I+L G+ ++ V D+L M G
Sbjct: 7 ATPAILDVDTGLDDAYALMFAACCPG--IDLLGVTCAAGNVGVDQVVRNTLDVLDMSGAA 64
Query: 466 DIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTA 525
++PV G + + + G G GG LPRSPR+
Sbjct: 65 EVPVASGATGPLADDHRSADHYHGKN-------GVGGV-----------QLPRSPRKPVE 106
Query: 526 ENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQII-GLQNS 584
E + F +++ + ES P +T++ PLTN+A ++ +
Sbjct: 107 EPATEF------------------LYRVLSESSPP---VTLIALAPLTNIALLLRAYPEA 145
Query: 585 SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHM 644
I + +GG + GNV + AEFN + DP AA V S + I L L
Sbjct: 146 HKHIDRIVWMGGAR----RYGNV-----TASAEFNAWSDPEAAHEVLHSGIPITLYALE- 195
Query: 645 QRRVASFFKI-LHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYH-----HVDTFLGEVL 698
F+ + + R + T R + ++T Q+ ++ H + LG+
Sbjct: 196 -----PFYTVTVSSQRVAEYTSAEDPRIRTIGEMLTYSQTRNAGETRIPDHTASCLGDA- 249
Query: 699 GAVILGGNPHLNQTYKIKSLEIISDGDISKVGQIIVNQ 736
GAV+ P L T ++ S++I DG +++ G+ ++++
Sbjct: 250 GAVMSVAAPELTTTSRL-SVDIELDGSLTR-GRTVMDE 285
>gi|114798081|ref|YP_758941.1| inosine-uridine preferring nucleoside hydrolase family protein
[Hyphomonas neptunium ATCC 15444]
gi|114738255|gb|ABI76380.1| Inosine-uridine preferring nucleoside hydrolase family protein
[Hyphomonas neptunium ATCC 15444]
Length = 310
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 61/122 (50%), Gaps = 24/122 (19%)
Query: 77 APLRQPTAQQVLINAISAGP---ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIR 133
APL+ A LI + A P +T+ V G TN A L+ P + +I I +MGGA
Sbjct: 99 APLQPSHAVDALIRLLKAAPHKGMTLVVTGPMTNLACALVMAPEIAAHIREIVIMGGA-- 156
Query: 134 SDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
D+ G + P+AEFNIF+DP AA VL +G+P TI+ LDAT
Sbjct: 157 ---------------DTEGG----NITPFAEFNIFADPHAAAIVLETGLPATILSLDATH 197
Query: 194 TI 195
+
Sbjct: 198 QV 199
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 102/242 (42%), Gaps = 49/242 (20%)
Query: 408 PVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDI 467
P++ D D D + L+ L P +++ I + T + +MGR DI
Sbjct: 6 PLIIDCDPGIDDAVMLMMALGSP--RFDVRAITTVAGNVPLRLTSRNARMMGELMGRPDI 63
Query: 468 PVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAEN 527
PV FA G P P P+ + F +YG+ P++P
Sbjct: 64 PV-----FA-GCPRPMLRP----------PVTAEDFHGESGIYGIDVFEPKAP------- 100
Query: 528 SVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLA-QIIGLQNSSS 586
L+ AVD ++++ P +T++ GP+TNLA ++ ++
Sbjct: 101 --------------LQPSHAVDALIRLLKA-APHKGMTLVVTGPMTNLACALVMAPEIAA 145
Query: 587 VIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQR 646
I+++ I+GG D E GN+ + +AEFN+F DP AA V E+ L ++ L
Sbjct: 146 HIREIVIMGG---ADTEGGNI-----TPFAEFNIFADPHAAAIVLETGLPATILSLDATH 197
Query: 647 RV 648
+V
Sbjct: 198 QV 199
>gi|357385654|ref|YP_004900378.1| inosine-uridine preferring nucleoside hydrolase [Pelagibacterium
halotolerans B2]
gi|351594291|gb|AEQ52628.1| inosine-uridine preferring nucleoside hydrolase [Pelagibacterium
halotolerans B2]
Length = 305
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 33/190 (17%)
Query: 78 PLRQPTAQQVLINAISAGP---ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
PL + A LI +S+ P +T+ +G TN A+ L+ P L + +E + +MGGAI
Sbjct: 94 PLEKEHAVDFLIRTLSSAPERSVTLCFVGPLTNLAVVLVKAPELAQKVERLVLMGGAI-- 151
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKT 194
+GN + P AE+NI++DP AA V + ++PLD T T
Sbjct: 152 ---------------GLGN-----TTPAAEYNIYADPHAARVVFEADFERVVLPLDTTST 191
Query: 195 IPVSENFFVEFERRQNTYEAQYC--FQSLKMIRDTWSGS-PPFHE----AYCMWDSFMAG 247
+ V + T A + +L + ++G P H+ YC+W +G
Sbjct: 192 VLVDTALAARVA-KIGTPGADFLAPLLALPVAHPRFAGKGRPMHDMCAVGYCLWPELFSG 250
Query: 248 VALSIMLNSS 257
++ ++ S
Sbjct: 251 RQCNVTIDCS 260
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 94/242 (38%), Gaps = 65/242 (26%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSS-------TGWATSATVDVVYDLLHM 461
++ D D D +A++ LL P I + GI ++ T W T +D
Sbjct: 2 IILDCDPGLDDAVAIMLLLSAPG--IEVAGITTAAGNVELHQTQWNTRGILD-------- 51
Query: 462 MGRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPR 521
+ P GC A+P + DT G+A
Sbjct: 52 -----------------RAPRRVPVYAGCPRPLAVPHVHAKHIHGDT--GIA-------- 84
Query: 522 RYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQI-IG 580
VRF A + L + AVD + S P +T+ GPLTNLA + +
Sbjct: 85 ------GVRFEAVET----PLEKEHAVDFLIRTLSS-APERSVTLCFVGPLTNLAVVLVK 133
Query: 581 LQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLI 640
+ ++ + ++GG G N T P+ AE+N++ DP AA+ VFE+ E ++
Sbjct: 134 APELAQKVERLVLMGGAIGLGN------TTPA---AEYNIYADPHAARVVFEADFERVVL 184
Query: 641 PL 642
PL
Sbjct: 185 PL 186
>gi|422657550|ref|ZP_16719990.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. lachrymans str. M302278]
gi|331016144|gb|EGH96200.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. lachrymans str. M302278]
Length = 341
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 55/103 (53%), Gaps = 21/103 (20%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
IT+ ++G TN A+ L+ P + + I+ + VMGGA FN N++
Sbjct: 149 ITIAMLGPQTNLALALVQAPEITQGIKEVVVMGGA----HFNGGNTT------------- 191
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSE 199
P AEFN+F+DP AA VL SG+ +T +PLD T I SE
Sbjct: 192 ----PAAEFNLFADPHAAQIVLASGVKLTYVPLDVTHKILTSE 230
Score = 42.4 bits (98), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 547 AVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGN 606
AVD + +P S ITI GP TNLA + L + + Q + V G GN
Sbjct: 133 AVDYLIRTLTQAKPHS-ITIAMLGPQTNLA--LALVQAPEITQGIKEVVVMGGAHFNGGN 189
Query: 607 VFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
T P+ AEFN+F DP AA+ V S +++ +PL + ++
Sbjct: 190 --TTPA---AEFNLFADPHAAQIVLASGVKLTYVPLDVTHKI 226
>gi|339486944|ref|YP_004701472.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas putida
S16]
gi|338837787|gb|AEJ12592.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas putida
S16]
Length = 378
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 68/137 (49%), Gaps = 24/137 (17%)
Query: 77 APLRQPTAQQVLINAI-SAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIR 133
APL Q A Q L++ + +A P IT+ ++G TN A+ L+ P + K I+ + VMGGA
Sbjct: 163 APLAQGNAVQYLVDTLGTAKPHSITIAMLGPQTNLALALIQRPDIAKGIKQVVVMGGA-- 220
Query: 134 SDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
FN N + P AEFN+++DP AA VL SG+ + +PLD T
Sbjct: 221 --HFNGGNIT-----------------PAAEFNLYADPHAAEVVLASGVQLIYLPLDVTH 261
Query: 194 TIPVSENFFVEFERRQN 210
+ S+ + N
Sbjct: 262 KLLTSDARLKQLAAVNN 278
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 100/251 (39%), Gaps = 48/251 (19%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
++ D D A D +AL + P EL N++ I + T GR+DIP
Sbjct: 70 LIIDTDPGADDVVALFLAMASPDEL-NIRAITTVAGNVRLEKTSRNARLAREWAGREDIP 128
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V +A G + P+ + + L G+ P++P
Sbjct: 129 V-----YA-----------GAARPLVRKPIYAADVHGEEGLTGIQVHEPKAP-------- 164
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLA-QIIGLQNSSSV 587
L Q AV + + +P S ITI GP TNLA +I + +
Sbjct: 165 -------------LAQGNAVQYLVDTLGTAKPHS-ITIAMLGPQTNLALALIQRPDIAKG 210
Query: 588 IQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
I+ V ++GG GN+ + AEFN++ DP AA+ V S +++ +PL + +
Sbjct: 211 IKQVVVMGGAH---FNGGNI-----TPAAEFNLYADPHAAEVVLASGVQLIYLPLDVTHK 262
Query: 648 VASFFKILHKL 658
+ + L +L
Sbjct: 263 LLTSDARLKQL 273
>gi|157369453|ref|YP_001477442.1| ribonucleoside hydrolase 1 [Serratia proteamaculans 568]
gi|157321217|gb|ABV40314.1| Inosine/uridine-preferring nucleoside hydrolase [Serratia
proteamaculans 568]
Length = 310
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 68/139 (48%), Gaps = 29/139 (20%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI---SAGPITVFVMGSHTNFAIFLM 113
YV+ G+ LP K P++Q + LI ++ S PIT+ V G TN A+ L
Sbjct: 80 YVHGKTGMGNTHLPTPTIK--PVKQSAVE--LIASLLRSSPQPITLVVTGPMTNIALLLA 135
Query: 114 NNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFA 173
+P LK NIE I MGG + + GN + P AEFNIF DP A
Sbjct: 136 QHPELKGNIERIVFMGGGMNA-----------------GN-----TTPVAEFNIFVDPEA 173
Query: 174 AYTVLHSGIPVTIIPLDAT 192
A VL SG+P+T+ L+ T
Sbjct: 174 AEMVLKSGVPLTMAGLNVT 192
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 101/256 (39%), Gaps = 51/256 (19%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M +P++ D D D +AL L P + +K I S+ T+ LL +M R
Sbjct: 1 MPRPIIIDCDPGLDDAIALAMALSSPE--LEVKAITTSAGNQTPEKTLHNALGLLTLMKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
+DIPV A G P + Y G G ++ LP +
Sbjct: 59 EDIPV------AAGAAAPLMRELVIADYVH----GKTGMGNTH--------LPTPTIKPV 100
Query: 525 AENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS 584
+++V AS P QP IT++ GP+TN+A ++
Sbjct: 101 KQSAVELIASLLRSSP---QP------------------ITLVVTGPMTNIALLLAQHPE 139
Query: 585 -SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLH 643
I+ + +GG N ++ AEFN+F+DP AA+ V +S + + + L+
Sbjct: 140 LKGNIERIVFMGGGMNAGN---------TTPVAEFNIFVDPEAAEMVLKSGVPLTMAGLN 190
Query: 644 MQRRVASFFKILHKLR 659
+ + + + ++R
Sbjct: 191 VTHQALVLPQDIERIR 206
>gi|390454785|ref|ZP_10240313.1| inosine-uridine preferring nucleoside hydrolase [Paenibacillus
peoriae KCTC 3763]
Length = 318
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 101/248 (40%), Gaps = 40/248 (16%)
Query: 9 VGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAG-------ECRYRQAIPVGQRLYVNTN 61
V + G I +G + P + IID+ G R + P RL+ +
Sbjct: 29 VHLTGVSVIPADGYLEPATDASRKIIDRFGQNKGPVEVAKSNSRGKNPFPAAWRLH--SF 86
Query: 62 YGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLK 119
Y L + G APL A Q LI + + G + G T+ A L P ++
Sbjct: 87 YVDALPVLNESGHMEAPLSSLPAHQHLIEKVRGAEGKTLLLFTGPLTDLARALDEAPDIE 146
Query: 120 KNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLH 179
IE + MGG GN+ + + AE+N+F DP AAY V
Sbjct: 147 AKIEKLVWMGGTFEK-----------------GNVEEPEHDGTAEWNVFWDPEAAYRVWQ 189
Query: 180 SGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPF----- 234
SGI + ++ L++T +P++ +N + A+ ++ + + + ++G PP
Sbjct: 190 SGITIDLVALESTSKVPLTPAV-------RNRWAAERRYEGVDFLGNCYAGCPPLVYSET 242
Query: 235 HEAYCMWD 242
+ Y +WD
Sbjct: 243 NSTYFLWD 250
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 563 KITILTNGPLTNLAQIIG-LQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMF 621
K +L GPLT+LA+ + + + I+ + +GG EKGNV AE+N+F
Sbjct: 123 KTLLLFTGPLTDLARALDEAPDIEAKIEKLVWMGGT----FEKGNVEEPEHDGTAEWNVF 178
Query: 622 LDPLAAKAVFESKLEIKLIPLHMQRRV 648
DP AA V++S + I L+ L +V
Sbjct: 179 WDPEAAYRVWQSGITIDLVALESTSKV 205
>gi|398889073|ref|ZP_10643033.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas sp. GM55]
gi|398189964|gb|EJM77219.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas sp. GM55]
Length = 342
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 65/124 (52%), Gaps = 24/124 (19%)
Query: 79 LRQPTAQQVLINAI-SAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSD 135
L Q +A LI+ + SA P IT+ ++G TN A+ L+ P + + I+ + VMGGA
Sbjct: 129 LAQGSAITYLIDTLKSARPHSITIAMLGPQTNLALALIQEPGIVQGIKEVVVMGGA---- 184
Query: 136 CFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTI 195
FN N + P AEFN+F+DP AA VL SG+ +T +PLD T I
Sbjct: 185 HFNGGNIT-----------------PVAEFNLFADPHAAEVVLKSGVKLTYLPLDVTHKI 227
Query: 196 PVSE 199
SE
Sbjct: 228 LTSE 231
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 97/240 (40%), Gaps = 46/240 (19%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
++ D D A D +AL++ L P EL N++ + + T GR+++P
Sbjct: 34 LIIDADPGADDIVALLFALASPDEL-NVRALTTVAGNVRLDKTSRNARLAREWAGREEVP 92
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V G PK P + YA+ I G L G+A PR
Sbjct: 93 VYAG--------APK-PLMRSPIYAEDIHGKEG-------LSGIAVHEPRQ--------- 127
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVI 588
L Q A+ ++S P S ITI GP TNLA + L ++
Sbjct: 128 ------------GLAQGSAITYLIDTLKSARPHS-ITIAMLGPQTNLA--LALIQEPGIV 172
Query: 589 QDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
Q + V G GN+ V AEFN+F DP AA+ V +S +++ +PL + ++
Sbjct: 173 QGIKEVVVMGGAHFNGGNITPV-----AEFNLFADPHAAEVVLKSGVKLTYLPLDVTHKI 227
>gi|389691621|ref|ZP_10180415.1| Inosine-uridine nucleoside N-ribohydrolase [Microvirga sp. WSM3557]
gi|388588604|gb|EIM28894.1| Inosine-uridine nucleoside N-ribohydrolase [Microvirga sp. WSM3557]
Length = 307
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 62/131 (47%), Gaps = 27/131 (20%)
Query: 77 APLRQPTAQQV------LINAISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGG 130
AP+RQP Q L+ AG + VF +G TN A +++ P K I I MGG
Sbjct: 98 APVRQPENQPAVEWLAELLLKEPAGAVDVFALGPLTNIAHLVLDKPDAAKRIGRIIAMGG 157
Query: 131 AIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLD 190
+ P + P +EFN+++DP AA VL SG+P+ ++PLD
Sbjct: 158 VVYE---------------------PGNVGPRSEFNLWADPEAADVVLSSGLPLVLVPLD 196
Query: 191 ATKTIPVSENF 201
T+ + + +F
Sbjct: 197 VTRRVRATRDF 207
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 90/213 (42%), Gaps = 21/213 (9%)
Query: 551 WKSIVESIEPGSKITILTNGPLTNLAQII-GLQNSSSVIQDVYIVGGNKGQDNEKGNVFT 609
W + + EP + + GPLTN+A ++ +++ I + +GG E GNV
Sbjct: 111 WLAELLLKEPAGAVDVFALGPLTNIAHLVLDKPDAAKRIGRIIAMGGVV---YEPGNV-- 165
Query: 610 VPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVF 669
+EFN++ DP AA V S L + L+PL + RRV + L K P +
Sbjct: 166 ---GPRSEFNLWADPEAADVVLSSGLPLVLVPLDVTRRVRATRDFTATLSASGK-PLASM 221
Query: 670 SQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKSLEI-ISDGDISK 728
L++ S D + ++ P L ++++ L + +S G +
Sbjct: 222 VADLIESYFETSTHQESRPLHDPCV------MLFALAPEL---FRLEDLRLSVSTGPAEE 272
Query: 729 VGQIIVNQEQGKLVKVLESLNVAVYYDHFAEVL 761
G + + E+G V+V S++ D A L
Sbjct: 273 AGALTIG-ERGTPVQVATSVDGPAALDLLARTL 304
>gi|440288552|ref|YP_007341317.1| Inosine-uridine nucleoside N-ribohydrolase [Enterobacteriaceae
bacterium strain FGI 57]
gi|440048074|gb|AGB79132.1| Inosine-uridine nucleoside N-ribohydrolase [Enterobacteriaceae
bacterium strain FGI 57]
Length = 311
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 73/148 (49%), Gaps = 31/148 (20%)
Query: 51 PVGQRLYVNTNY----GLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGS 104
P+ ++L + N GL LP+ G +APL TA +++ + SA P+T+ G
Sbjct: 70 PLMRKLIIADNVHGESGLDGPALPEPG--FAPLSC-TAVELMAKTLRESAEPVTIVSTGP 126
Query: 105 HTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAE 164
TN A+ L ++P L + I I +MGGA+ S+GN P AE
Sbjct: 127 QTNVALLLNSHPELHEKIAQIVIMGGAM-----------------SLGNW-----TPAAE 164
Query: 165 FNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
FNI+ DP AA V SGIPV + LD T
Sbjct: 165 FNIYVDPEAAEIVFQSGIPVVMAGLDVT 192
Score = 46.6 bits (109), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 105/258 (40%), Gaps = 55/258 (21%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MATPIILDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPDKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G + P + +D ++G + D P P
Sbjct: 59 PDIPV------AGGAIKPLM----------------RKLIIADNVHGESGLDGPALPEPG 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVW-KSIVESIEPGSKITILTNGPLTNLAQIIGLQ 582
A S AV++ K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FAPLSCT----------------AVELMAKTLRESAEP---VTIVSTGPQTNVALLLNSH 137
Query: 583 NS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
I + I+GG N + AEFN+++DP AA+ VF+S + + +
Sbjct: 138 PELHEKIAQIVIMGGAMSLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAG 188
Query: 642 LHMQRRVASFFKILHKLR 659
L + + + + R
Sbjct: 189 LDVTHKAQIHVEDTERFR 206
>gi|347534082|ref|YP_004840752.1| Non-specific ribonucleoside hydrolase rihC [Lactobacillus
sanfranciscensis TMW 1.1304]
gi|345504138|gb|AEN98820.1| Non-specific ribonucleoside hydrolase rihC [Lactobacillus
sanfranciscensis TMW 1.1304]
Length = 304
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 63/131 (48%), Gaps = 25/131 (19%)
Query: 78 PLRQPTAQQVLINAISAG--PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSD 135
PL++ TA Q + I A PIT+ GS+TN A+ P +K +E I MGG +
Sbjct: 99 PLKE-TAVQAMYRVIMASDEPITLVATGSYTNVALLFAEYPEVKDKLERIVAMGGTLG-- 155
Query: 136 CFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTI 195
C N T++ AEFN+F+DP AA + SG+P+ ++ LD TK
Sbjct: 156 CGNMTSA--------------------AEFNVFTDPHAAKMMYQSGVPIVMVGLDVTKKA 195
Query: 196 PVSENFFVEFE 206
V+ E E
Sbjct: 196 LVTPETLAEIE 206
>gi|349701309|ref|ZP_08902938.1| inosine-uridine preferring nucleoside hydrolase [Gluconacetobacter
europaeus LMG 18494]
Length = 313
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 95/232 (40%), Gaps = 43/232 (18%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQV---LINAISAGP---ITVFVMGSHTNFAI 110
+V+ G+ LPQ P +P Q LI+ I A P ITV +G TN A+
Sbjct: 81 HVHGRTGMDGPDLPQ------PELRPQGQHAVDFLIDTIRAHPSGSITVVTLGPMTNLAV 134
Query: 111 FLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSD 170
L+ P + I + MGGA S+C N T P AEFN+F+D
Sbjct: 135 ALVKAPDIAARIGRVVSMGGAY-SECGNIT--------------------PSAEFNMFAD 173
Query: 171 PFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFE----RRQNTYEAQYCF-QSLKMIR 225
P AA VL +P+T++PLD T +S + R A F + + +
Sbjct: 174 PDAADIVLRRQLPLTLVPLDITHKFLISASRLDRLRALPGRCAQAAAAMLGFSERFDLEK 233
Query: 226 DTWSGSP---PFHEAYCMWDSFMAG--VALSIMLNSSSHNGENACSEMEYMN 272
W G+P P + + AG V +S+ ++S G A + N
Sbjct: 234 YGWDGAPLHDPCTIGWLLAPDLFAGRTVNVSVEVDSPLMQGATAVDWWQVTN 285
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 66/148 (44%), Gaps = 15/148 (10%)
Query: 519 SPRRYTAENSVRFGASQDNDDPELRQP-------LAVDVWKSIVESIEPGSKITILTNGP 571
+P R T + D P+L QP AVD + + P IT++T GP
Sbjct: 70 APLRRTPITAEHVHGRTGMDGPDLPQPELRPQGQHAVDFLIDTIRA-HPSGSITVVTLGP 128
Query: 572 LTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVF 631
+TNLA + L + + + V G +E GN+ + AEFNMF DP AA V
Sbjct: 129 MTNLA--VALVKAPDIAARIGRVVSMGGAYSECGNI-----TPSAEFNMFADPDAADIVL 181
Query: 632 ESKLEIKLIPLHMQRRVASFFKILHKLR 659
+L + L+PL + + L +LR
Sbjct: 182 RRQLPLTLVPLDITHKFLISASRLDRLR 209
>gi|333893517|ref|YP_004467392.1| inosine/uridine-preferring nucleoside hydrolase [Alteromonas sp.
SN2]
gi|332993535|gb|AEF03590.1| inosine/uridine-preferring nucleoside hydrolase [Alteromonas sp.
SN2]
Length = 323
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 26/155 (16%)
Query: 91 AISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDS 150
A +A P+TV + G TN A L +P L N++ + MGGA++
Sbjct: 117 AHAAEPVTVLMTGPATNLAAALTQSPDLVDNVQKVVWMGGAVKVK--------------- 161
Query: 151 IGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQ- 209
GN+ D + AE+N + DP A ++ SG+ + ++PLDAT +PVS +F + +
Sbjct: 162 -GNVAMHDHDGSAEWNAYWDPKATKALVDSGVNLLLVPLDATNDLPVSWDFLRQLAVKNT 220
Query: 210 --NTYEAQYCFQSLKMIRDTWSGSPPFHEAYCMWD 242
+ Q+ ++ I P + Y +WD
Sbjct: 221 PVSDLSGQFWASTVTSI-------PSYEFTYFLWD 248
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 10/152 (6%)
Query: 553 SIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPS 612
++ + EP +T+L GP TNLA L S ++ +V V G KGNV
Sbjct: 115 ALAHAAEP---VTVLMTGPATNLAA--ALTQSPDLVDNVQKVVWMGGAVKVKGNVAMHDH 169
Query: 613 SKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQR 672
AE+N + DP A KA+ +S + + L+PL + + L +L K TP S S +
Sbjct: 170 DGSAEWNAYWDPKATKALVDSGVNLLLVPLDATNDLPVSWDFLRQLA-VKNTPVSDLSGQ 228
Query: 673 LLQGLMTLQQSHHSYHHVDTFLGEVLGAVILG 704
+T S+ + FL ++L IL
Sbjct: 229 FWASTVTSIPSYEFTY----FLWDILSTCILA 256
>gi|70729477|ref|YP_259215.1| pyrimidine-specific ribonucleoside hydrolase RihA [Pseudomonas
protegens Pf-5]
gi|68343776|gb|AAY91382.1| pyrimidine-specific ribonucleoside hydrolase RihA [Pseudomonas
protegens Pf-5]
Length = 342
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 64/126 (50%), Gaps = 24/126 (19%)
Query: 77 APLRQPTAQQVLINAISAG---PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIR 133
APL + A LI+ + A IT+ ++G TN A+ L+ P + + I+ + VMGGA
Sbjct: 127 APLAKGNAINYLIDTLRAAKPHSITIAMLGPQTNLALALIQAPDITQGIKEVVVMGGA-- 184
Query: 134 SDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
FN N + P AEFN+F+DP AA VL SG+ +T +PLD T
Sbjct: 185 --HFNGGNIT-----------------PVAEFNLFADPQAAEVVLKSGVKLTYLPLDVTH 225
Query: 194 TIPVSE 199
+ S+
Sbjct: 226 KVLTSD 231
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 106/251 (42%), Gaps = 48/251 (19%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
++ D D A D +AL++ L P EL ++ + + T GR+++P
Sbjct: 34 LIIDTDPGADDVVALLFALASPEEL-QIRALTTVAGNVRLDKTSRNARLAREWAGREEVP 92
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V G PK P + YA+ I G + G+ P++P
Sbjct: 93 VYAG--------APK-PLLRTPIYAENIHGKEG-------ISGVTVHEPKAP-------- 128
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLA-QIIGLQNSSSV 587
L + A++ + + +P S ITI GP TNLA +I + +
Sbjct: 129 -------------LAKGNAINYLIDTLRAAKPHS-ITIAMLGPQTNLALALIQAPDITQG 174
Query: 588 IQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
I++V ++GG GN+ V AEFN+F DP AA+ V +S +++ +PL + +
Sbjct: 175 IKEVVVMGGAHFNG---GNITPV-----AEFNLFADPQAAEVVLKSGVKLTYLPLDVTHK 226
Query: 648 VASFFKILHKL 658
V + L K+
Sbjct: 227 VLTSDARLQKI 237
>gi|420239272|ref|ZP_14743607.1| Inosine-uridine nucleoside N-ribohydrolase [Rhizobium sp. CF080]
gi|398081549|gb|EJL72325.1| Inosine-uridine nucleoside N-ribohydrolase [Rhizobium sp. CF080]
Length = 324
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 63/151 (41%), Gaps = 26/151 (17%)
Query: 96 PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY 155
PIT+ +G TN A+ L+ +P + + I I MGGA ++G+
Sbjct: 121 PITICAIGPMTNLALALIQHPDVARGIRQIVSMGGAF----------------TALGH-- 162
Query: 156 PDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNT---- 211
P+AEFN+ +DP AA V SG+P+ ++PLD T +E F F R
Sbjct: 163 ---RTPWAEFNVLADPHAAEIVYRSGVPIVVMPLDMTFQALFTEEHFKSFGTRGGAAGGA 219
Query: 212 -YEAQYCFQSLKMIRDTWSGSPPFHEAYCMW 241
Y F M+R G P W
Sbjct: 220 LYNLFSTFDRSDMVRFGRPGGPIHDATTIAW 250
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 98/238 (41%), Gaps = 50/238 (21%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
V+ D D D A++ L P I++ G+ + + TV ++ + GR D+P
Sbjct: 6 VIIDADPGLDDAAAILMALASPE--IDVLGLSIVAGNVPLQDTVANACRIVGVSGRTDVP 63
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V G P KYA+ G F SD L + R + E++
Sbjct: 64 V------YAGAAGPLVREQVLGKYARI-----GAF--SDDL------VARGGIEPSEEHA 104
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVI 588
VRF + +S E+ E G ITI GP+TNLA ++I
Sbjct: 105 VRF------------------IVRSAREAAEAGEPITICAIGPMTNLAL--------ALI 138
Query: 589 QDVYIVGGNKGQDNEKGNVFTVPSSK--YAEFNMFLDPLAAKAVFESKLEIKLIPLHM 644
Q + G + Q G FT + +AEFN+ DP AA+ V+ S + I ++PL M
Sbjct: 139 QHPDVARGIR-QIVSMGGAFTALGHRTPWAEFNVLADPHAAEIVYRSGVPIVVMPLDM 195
>gi|440739121|ref|ZP_20918642.1| putative inosine-uridine preferring nucleoside hydrolase
[Pseudomonas fluorescens BRIP34879]
gi|447917400|ref|YP_007397968.1| putative inosine-uridine preferring nucleoside hydrolase
[Pseudomonas poae RE*1-1-14]
gi|440380111|gb|ELQ16682.1| putative inosine-uridine preferring nucleoside hydrolase
[Pseudomonas fluorescens BRIP34879]
gi|445201263|gb|AGE26472.1| putative inosine-uridine preferring nucleoside hydrolase
[Pseudomonas poae RE*1-1-14]
Length = 342
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 29/133 (21%)
Query: 70 PQGGRKYAPLRQPTAQQVLINAISAG---PITVFVMGSHTNFAIFLMNNPHLKKNIEHIY 126
PQ G L + A LI + A IT+ ++G TN A+ L +P + + I+ +
Sbjct: 125 PQKG-----LAEGNAVDYLIKTLRAAKPHSITIAMLGPQTNLALALTQDPEITQGIKEVV 179
Query: 127 VMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTI 186
VMGGA FN N + P AEFN+F+DP AA VL SG+ +T
Sbjct: 180 VMGGA----HFNGGNIT-----------------PVAEFNLFADPLAAEIVLKSGVKLTY 218
Query: 187 IPLDATKTIPVSE 199
+PLD T + SE
Sbjct: 219 LPLDVTHKVLTSE 231
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Query: 547 AVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGN 606
AVD + + +P S ITI GP TNLA + L + Q + V G GN
Sbjct: 134 AVDYLIKTLRAAKPHS-ITIAMLGPQTNLA--LALTQDPEITQGIKEVVVMGGAHFNGGN 190
Query: 607 VFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRD 660
+ V AEFN+F DPLAA+ V +S +++ +PL + +V + L K+ D
Sbjct: 191 ITPV-----AEFNLFADPLAAEIVLKSGVKLTYLPLDVTHKVLTSEARLKKIAD 239
>gi|398935554|ref|ZP_10666512.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas sp.
GM41(2012)]
gi|398169506|gb|EJM57488.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas sp.
GM41(2012)]
Length = 342
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 62/124 (50%), Gaps = 24/124 (19%)
Query: 79 LRQPTAQQVLINAISAG---PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSD 135
L Q A LI+ + A IT+ ++G TN A+ L+ P + + I+ + +MGGA
Sbjct: 129 LAQGNAVNYLIDTLKAAKPHSITIAMLGPQTNLALALIQEPEIVQGIKEVVIMGGA---- 184
Query: 136 CFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTI 195
FN N + P AEFN+F+DP AA VL SG+ +T +PLD T I
Sbjct: 185 HFNGGNIT-----------------PVAEFNLFADPQAAEVVLKSGVKLTYLPLDVTHKI 227
Query: 196 PVSE 199
SE
Sbjct: 228 LTSE 231
Score = 46.6 bits (109), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 100/240 (41%), Gaps = 46/240 (19%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
++ D D A D +AL++ L P EL N++ + + T GR+++P
Sbjct: 34 LIIDTDPGADDVVALLFALASPQEL-NIRALTTVAGNVRLDKTSRNARLAREWAGREEVP 92
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V G PK P + YA+ I G L G+ P+
Sbjct: 93 VYAG--------APK-PLMRTPIYAEDIHGKEG-------LSGVTVHEPKK--------- 127
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVI 588
G +Q N AV+ +++ +P S ITI GP TNLA + L ++
Sbjct: 128 ---GLAQGN---------AVNYLIDTLKAAKPHS-ITIAMLGPQTNLA--LALIQEPEIV 172
Query: 589 QDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
Q + V G GN+ V AEFN+F DP AA+ V +S +++ +PL + ++
Sbjct: 173 QGIKEVVIMGGAHFNGGNITPV-----AEFNLFADPQAAEVVLKSGVKLTYLPLDVTHKI 227
>gi|163846077|ref|YP_001634121.1| inosine/uridine-preferring nucleoside hydrolase [Chloroflexus
aurantiacus J-10-fl]
gi|222523811|ref|YP_002568281.1| inosine/uridine-preferring nucleoside hydrolase [Chloroflexus sp.
Y-400-fl]
gi|163667366|gb|ABY33732.1| Inosine/uridine-preferring nucleoside hydrolase [Chloroflexus
aurantiacus J-10-fl]
gi|222447690|gb|ACM51956.1| Inosine/uridine-preferring nucleoside hydrolase [Chloroflexus sp.
Y-400-fl]
Length = 319
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 45/173 (26%)
Query: 63 GLRKAFLPQGGRKYAPLRQPTAQQVLINAISA-GPITVFVMGSHTNFAIFLMNNPHLKKN 121
GL A LP + P+ + ++ A+ A G +T+ +G TN A+ L P L
Sbjct: 89 GLGYAQLPPA--QLQPVSEHAVDFIIRTALEAPGEVTLVAVGPLTNVALALRKEPRLAGA 146
Query: 122 IEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSG 181
+ I +MGGA+R+D GN+ P AEFN+++DP AA V SG
Sbjct: 147 LREIVIMGGALRAD----------------GNV-----TPRAEFNVYADPHAAQIVFSSG 185
Query: 182 IPVTIIPLDATKTIPVSEN---------------------FFVEFERRQNTYE 213
P+ I+P D T+ + + E+ F++EF RR Y+
Sbjct: 186 APLVIMPWDITRLVRLHESEVNRLAQAGKPIGRFIADATRFYIEFHRRYFGYD 238
Score = 46.2 bits (108), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 59/111 (53%), Gaps = 10/111 (9%)
Query: 540 PELRQPLAVDVWKSIVES-IEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGN 597
P QP++ I+ + +E ++T++ GPLTN+A + + + ++++ I+GG
Sbjct: 97 PAQLQPVSEHAVDFIIRTALEAPGEVTLVAVGPLTNVALALRKEPRLAGALREIVIMGGA 156
Query: 598 KGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
D GNV + AEFN++ DP AA+ VF S + ++P + R V
Sbjct: 157 LRAD---GNV-----TPRAEFNVYADPHAAQIVFSSGAPLVIMPWDITRLV 199
>gi|312961949|ref|ZP_07776446.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
fluorescens WH6]
gi|311283759|gb|EFQ62343.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
fluorescens WH6]
Length = 342
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 61/124 (49%), Gaps = 24/124 (19%)
Query: 79 LRQPTAQQVLINAISAG---PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSD 135
L + A LI + A IT+ ++G TN A+ L +P + + I+ + VMGGA
Sbjct: 129 LAEGNAVDYLIKTLRAAKPHSITIAMLGPQTNLALALTQDPEITQGIKEVVVMGGA---- 184
Query: 136 CFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTI 195
FN N + P AEFN+F+DP AA VL SG+ +T +PLD T +
Sbjct: 185 HFNGGNIT-----------------PVAEFNLFADPIAAEIVLKSGVKLTYLPLDVTHKV 227
Query: 196 PVSE 199
SE
Sbjct: 228 LTSE 231
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 547 AVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGN 606
AVD + + +P S ITI GP TNLA + L + Q + V G GN
Sbjct: 134 AVDYLIKTLRAAKPHS-ITIAMLGPQTNLA--LALTQDPEITQGIKEVVVMGGAHFNGGN 190
Query: 607 VFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPE 666
+ V AEFN+F DP+AA+ V +S +++ +PL + +V + L ++ D K
Sbjct: 191 ITPV-----AEFNLFADPIAAEIVLKSGVKLTYLPLDVTHKVLTSEARLKQIADIKNNAS 245
Query: 667 SVFSQRL 673
+ L
Sbjct: 246 KIVGDIL 252
>gi|443644317|ref|ZP_21128167.1| Inosine/uridine preferring nucleoside hydrolase [Pseudomonas
syringae pv. syringae B64]
gi|443284334|gb|ELS43339.1| Inosine/uridine preferring nucleoside hydrolase [Pseudomonas
syringae pv. syringae B64]
Length = 341
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
IT+ ++G TN A+ L+ P + + I+ + VMGGA FN N +
Sbjct: 149 ITIAMLGPQTNLALALVQAPEINQGIKEVVVMGGA----HFNGGNIT------------- 191
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSE 199
P AEFN+F+DP AA VL SG+ +T +PLD T I SE
Sbjct: 192 ----PVAEFNLFADPHAAQIVLASGVKLTYVPLDVTHKILTSE 230
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 10/103 (9%)
Query: 547 AVDVWKSIVESIEPGSKITILTNGPLTNLA-QIIGLQNSSSVIQDVYIVGGNKGQDNEKG 605
AVD + +P S ITI GP TNLA ++ + I++V ++GG G
Sbjct: 133 AVDYLIRTLSKAKPHS-ITIAMLGPQTNLALALVQAPEINQGIKEVVVMGG---AHFNGG 188
Query: 606 NVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
N+ V AEFN+F DP AA+ V S +++ +PL + ++
Sbjct: 189 NITPV-----AEFNLFADPHAAQIVLASGVKLTYVPLDVTHKI 226
>gi|422621376|ref|ZP_16690006.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. pisi str. 1704B]
gi|422667131|ref|ZP_16726996.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. aptata str. DSM 50252]
gi|424067177|ref|ZP_17804634.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. avellanae str. ISPaVe013]
gi|424071781|ref|ZP_17809203.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. avellanae str. ISPaVe037]
gi|440721809|ref|ZP_20902201.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae BRIP34876]
gi|440724854|ref|ZP_20905129.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae BRIP34881]
gi|440743820|ref|ZP_20923128.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae BRIP39023]
gi|330944684|gb|EGH46623.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. pisi str. 1704B]
gi|330977705|gb|EGH77608.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. aptata str. DSM 50252]
gi|407998423|gb|EKG38836.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. avellanae str. ISPaVe037]
gi|408001246|gb|EKG41564.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. avellanae str. ISPaVe013]
gi|440362608|gb|ELP99794.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae BRIP34876]
gi|440369433|gb|ELQ06410.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae BRIP34881]
gi|440374886|gb|ELQ11601.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae BRIP39023]
Length = 341
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
IT+ ++G TN A+ L+ P + + I+ + VMGGA FN N +
Sbjct: 149 ITIAMLGPQTNLALALVQAPEITQGIKEVVVMGGA----HFNGGNIT------------- 191
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSE 199
P AEFN+F+DP AA VL SG+ +T +PLD T I SE
Sbjct: 192 ----PVAEFNLFADPHAAQIVLASGVKLTYVPLDVTHKILTSE 230
Score = 43.1 bits (100), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 8/102 (7%)
Query: 547 AVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGN 606
AVD + +P S ITI GP TNLA + L + + Q + V G GN
Sbjct: 133 AVDYLIRTLSKAKPHS-ITIAMLGPQTNLA--LALVQAPEITQGIKEVVVMGGAHFNGGN 189
Query: 607 VFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
+ V AEFN+F DP AA+ V S +++ +PL + ++
Sbjct: 190 ITPV-----AEFNLFADPHAAQIVLASGVKLTYVPLDVTHKI 226
>gi|71735383|ref|YP_274350.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. phaseolicola 1448A]
gi|71555936|gb|AAZ35147.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. phaseolicola 1448A]
Length = 341
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
IT+ ++G TN A+ L+ P + + I+ + VMGGA FN N +
Sbjct: 149 ITIAMLGPQTNLALALVQAPEITQGIKEVVVMGGA----HFNGGNIT------------- 191
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSE 199
P AEFN+F+DP AA VL SG+ +T +PLD T I SE
Sbjct: 192 ----PVAEFNLFADPHAAQIVLASGVKLTYVPLDVTHKILTSE 230
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 8/102 (7%)
Query: 547 AVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGN 606
AVD + +P S ITI GP TNLA + L + + Q + V G GN
Sbjct: 133 AVDYLIRTLSKAKPHS-ITIAMLGPQTNLA--LALVQAPEITQGIKEVVVMGGAHFNGGN 189
Query: 607 VFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
+ V AEFN+F DP AA+ V S +++ +PL + ++
Sbjct: 190 ITPV-----AEFNLFADPHAAQIVLASGVKLTYVPLDVTHKI 226
>gi|302187608|ref|ZP_07264281.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. syringae 642]
Length = 341
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
IT+ ++G TN A+ L+ P + + I+ + VMGGA FN N +
Sbjct: 149 ITIAMLGPQTNLALALVQAPEITQGIKEVVVMGGA----HFNGGNIT------------- 191
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSE 199
P AEFN+F+DP AA VL SG+ +T +PLD T I SE
Sbjct: 192 ----PVAEFNLFADPHAAQIVLASGVKLTYVPLDVTHKILTSE 230
Score = 43.1 bits (100), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 8/102 (7%)
Query: 547 AVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGN 606
AVD + +P S ITI GP TNLA + L + + Q + V G GN
Sbjct: 133 AVDYLIRTLSKAKPHS-ITIAMLGPQTNLA--LALVQAPEITQGIKEVVVMGGAHFNGGN 189
Query: 607 VFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
+ V AEFN+F DP AA+ V S +++ +PL + ++
Sbjct: 190 ITPV-----AEFNLFADPHAAQIVLASGVKLTYVPLDVTHKI 226
>gi|289623641|ref|ZP_06456595.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. aesculi str. NCPPB 3681]
gi|289647141|ref|ZP_06478484.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. aesculi str. 2250]
gi|422582851|ref|ZP_16657983.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. aesculi str. 0893_23]
gi|330867690|gb|EGH02399.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. aesculi str. 0893_23]
Length = 341
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
IT+ ++G TN A+ L+ P + + I+ + VMGGA FN N +
Sbjct: 149 ITIAMLGPQTNLALALVQAPEITQGIKEVVVMGGA----HFNGGNIT------------- 191
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSE 199
P AEFN+F+DP AA VL SG+ +T +PLD T I SE
Sbjct: 192 ----PVAEFNLFADPHAAQIVLASGVKLTYVPLDVTHKILTSE 230
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 564 ITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLD 623
ITI GP TNLA + L + + Q + V G GN+ V AEFN+F D
Sbjct: 149 ITIAMLGPQTNLA--LALVQAPEITQGIKEVVVMGGAHFNGGNITPV-----AEFNLFAD 201
Query: 624 PLAAKAVFESKLEIKLIPLHMQRRV 648
P AA+ V S +++ +PL + ++
Sbjct: 202 PHAAQIVLASGVKLTYVPLDVTHKI 226
>gi|416016524|ref|ZP_11563851.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. glycinea str. B076]
gi|416027327|ref|ZP_11570600.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. glycinea str. race 4]
gi|320324297|gb|EFW80376.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. glycinea str. B076]
gi|320328581|gb|EFW84583.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. glycinea str. race 4]
Length = 341
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
IT+ ++G TN A+ L+ P + + I+ + VMGGA FN N +
Sbjct: 149 ITIAMLGPQTNLALALVQAPEITQGIKEVVVMGGA----HFNGGNIT------------- 191
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSE 199
P AEFN+F+DP AA VL SG+ +T +PLD T I SE
Sbjct: 192 ----PVAEFNLFADPHAAQIVLASGVKLTYVPLDVTHKILTSE 230
Score = 43.1 bits (100), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 8/102 (7%)
Query: 547 AVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGN 606
AVD + +P S ITI GP TNLA + L + + Q + V G GN
Sbjct: 133 AVDYLIRTLSKAKPHS-ITIAMLGPQTNLA--LALVQAPEITQGIKEVVVMGGAHFNGGN 189
Query: 607 VFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
+ V AEFN+F DP AA+ V S +++ +PL + ++
Sbjct: 190 ITPV-----AEFNLFADPHAAQIVLASGVKLTYVPLDVTHKI 226
>gi|422676250|ref|ZP_16735582.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. aceris str. M302273]
gi|330973956|gb|EGH74022.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. aceris str. M302273]
Length = 341
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
IT+ ++G TN A+ L+ P + + I+ + VMGGA FN N +
Sbjct: 149 ITIAMLGPQTNLALALVQAPEITQGIKEVVVMGGA----HFNGGNIT------------- 191
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSE 199
P AEFN+F+DP AA VL SG+ +T +PLD T I SE
Sbjct: 192 ----PVAEFNLFADPHAAQIVLASGVKLTYVPLDVTHKILTSE 230
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 8/102 (7%)
Query: 547 AVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGN 606
AVD + +P S ITI GP TNLA + L + + Q + V G GN
Sbjct: 133 AVDYLIRTLSKAKPHS-ITIAMLGPQTNLA--LALVQAPEITQGIKEVVVMGGAHFNGGN 189
Query: 607 VFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
+ V AEFN+F DP AA+ V S +++ +PL + ++
Sbjct: 190 ITPV-----AEFNLFADPHAAQIVLASGVKLTYVPLDVTHKI 226
>gi|257486177|ref|ZP_05640218.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|422598977|ref|ZP_16673229.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. lachrymans str. M301315]
gi|298158779|gb|EFH99842.1| Inosine-uridine preferring nucleoside hydrolase [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|330989246|gb|EGH87349.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. lachrymans str. M301315]
Length = 341
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
IT+ ++G TN A+ L+ P + + I+ + VMGGA FN N +
Sbjct: 149 ITIAMLGPQTNLALALVQAPEITQGIKEVVVMGGA----HFNGGNIT------------- 191
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSE 199
P AEFN+F+DP AA VL SG+ +T +PLD T I SE
Sbjct: 192 ----PVAEFNLFADPHAAQIVLASGVKLTYVPLDVTHKILTSE 230
Score = 43.1 bits (100), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 8/102 (7%)
Query: 547 AVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGN 606
AVD + +P S ITI GP TNLA + L + + Q + V G GN
Sbjct: 133 AVDYLIRTLSKAKPHS-ITIAMLGPQTNLA--LALVQAPEITQGIKEVVVMGGAHFNGGN 189
Query: 607 VFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
+ V AEFN+F DP AA+ V S +++ +PL + ++
Sbjct: 190 ITPV-----AEFNLFADPHAAQIVLASGVKLTYVPLDVTHKI 226
>gi|66045397|ref|YP_235238.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. syringae B728a]
gi|63256104|gb|AAY37200.1| Inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. syringae B728a]
Length = 341
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
IT+ ++G TN A+ L+ P + + I+ + VMGGA FN N +
Sbjct: 149 ITIAMLGPQTNLALALVQAPEITQGIKEVVVMGGA----HFNGGNIT------------- 191
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSE 199
P AEFN+F+DP AA VL SG+ +T +PLD T I SE
Sbjct: 192 ----PVAEFNLFADPHAAQIVLASGVKLTYVPLDVTHKILTSE 230
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 8/102 (7%)
Query: 547 AVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGN 606
AVD + +P S ITI GP TNLA + L + + Q + V G GN
Sbjct: 133 AVDYLIRTLSKAKPHS-ITIAMLGPQTNLA--LALVQAPEITQGIKEVVVMGGAHFNGGN 189
Query: 607 VFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
+ V AEFN+F DP AA+ V S +++ +PL + ++
Sbjct: 190 ITPV-----AEFNLFADPHAAQIVLASGVKLTYVPLDVTHKI 226
>gi|422407692|ref|ZP_16484656.1| inosine/uridine-preferring nucleoside hydrolase, partial
[Pseudomonas syringae pv. glycinea str. race 4]
gi|330885563|gb|EGH19712.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. glycinea str. race 4]
Length = 321
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
IT+ ++G TN A+ L+ P + + I+ + VMGGA FN N +
Sbjct: 129 ITIAMLGPQTNLALALVQAPEITQGIKEVVVMGGA----HFNGGNIT------------- 171
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSE 199
P AEFN+F+DP AA VL SG+ +T +PLD T I SE
Sbjct: 172 ----PVAEFNLFADPHAAQIVLASGVKLTYVPLDVTHKILTSE 210
Score = 43.1 bits (100), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 8/102 (7%)
Query: 547 AVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGN 606
AVD + +P S ITI GP TNLA + L + + Q + V G GN
Sbjct: 113 AVDYLIRTLSKAKPHS-ITIAMLGPQTNLA--LALVQAPEITQGIKEVVVMGGAHFNGGN 169
Query: 607 VFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
+ V AEFN+F DP AA+ V S +++ +PL + ++
Sbjct: 170 ITPV-----AEFNLFADPHAAQIVLASGVKLTYVPLDVTHKI 206
>gi|399054476|ref|ZP_10742974.1| Inosine-uridine nucleoside N-ribohydrolase [Brevibacillus sp.
CF112]
gi|398047795|gb|EJL40302.1| Inosine-uridine nucleoside N-ribohydrolase [Brevibacillus sp.
CF112]
Length = 310
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 63/131 (48%), Gaps = 24/131 (18%)
Query: 81 QP-TAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCF 137
QP +A Q LI+ I A P IT+ ++GS TN A +M P + IE + MGGA+
Sbjct: 100 QPESATQFLISTIKANPGQITLIMVGSMTNLARAIMAAPEIVTLIEQVVAMGGAVT---- 155
Query: 138 NSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPV 197
P + P AE NI +DP AA V+ SGIP+T++ LD T +
Sbjct: 156 -----------------VPGNRTPVAEANICADPEAAAFVMQSGIPMTLVGLDVTMQTLL 198
Query: 198 SENFFVEFERR 208
+ E+ R
Sbjct: 199 TREHLREWRAR 209
>gi|407362616|ref|ZP_11109148.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
mandelii JR-1]
Length = 342
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 63/124 (50%), Gaps = 24/124 (19%)
Query: 79 LRQPTAQQVLINAISAG---PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSD 135
L + A + LI+ + A IT+ ++G TN A+ L+ P + + I+ + +MGGA
Sbjct: 129 LAEGNAVEYLIDTLKAAKPHSITIAMLGPQTNLALALIQEPEIVQGIKEVVIMGGA---- 184
Query: 136 CFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTI 195
FN N + P AEFN+F+DP AA VL SG+ +T +PLD T I
Sbjct: 185 HFNGGNIT-----------------PVAEFNLFADPQAAEVVLKSGVKLTYLPLDVTHKI 227
Query: 196 PVSE 199
SE
Sbjct: 228 LTSE 231
Score = 46.2 bits (108), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 101/240 (42%), Gaps = 46/240 (19%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
++ D D A D +AL++ L P EL N++ + + T GR+++P
Sbjct: 34 LIIDTDPGADDVVALLFALASPEEL-NIRALTTVAGNVRLDKTSRNARLAREWAGREEVP 92
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V G PK P + YA+ I G L T++ P++ AE +
Sbjct: 93 VYAG--------APK-PLMRTPIYAENIHGKEG--LSGVTVH--------EPKKGLAEGN 133
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVI 588
AV+ +++ +P S ITI GP TNLA + L ++
Sbjct: 134 ------------------AVEYLIDTLKAAKPHS-ITIAMLGPQTNLA--LALIQEPEIV 172
Query: 589 QDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
Q + V G GN+ V AEFN+F DP AA+ V +S +++ +PL + ++
Sbjct: 173 QGIKEVVIMGGAHFNGGNITPV-----AEFNLFADPQAAEVVLKSGVKLTYLPLDVTHKI 227
>gi|422645353|ref|ZP_16708489.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. maculicola str. ES4326]
gi|330958903|gb|EGH59163.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. maculicola str. ES4326]
Length = 325
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
IT+ ++G TN A+ L+ P + + I+ + VMGGA FN N +
Sbjct: 133 ITIAMLGPQTNLALALVQAPEITQGIKEVVVMGGA----HFNGGNIT------------- 175
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSE 199
P AEFN+F+DP AA VL SG+ +T +PLD T I SE
Sbjct: 176 ----PVAEFNLFADPHAAQIVLGSGVKLTYVPLDVTHKILTSE 214
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 8/102 (7%)
Query: 547 AVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGN 606
AVD + +P S ITI GP TNLA + L + + Q + V G GN
Sbjct: 117 AVDYLIRTLSKAKPHS-ITIAMLGPQTNLA--LALVQAPEITQGIKEVVVMGGAHFNGGN 173
Query: 607 VFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
+ V AEFN+F DP AA+ V S +++ +PL + ++
Sbjct: 174 ITPV-----AEFNLFADPHAAQIVLGSGVKLTYVPLDVTHKI 210
>gi|28869570|ref|NP_792189.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. tomato str. DC3000]
gi|213970500|ref|ZP_03398627.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. tomato T1]
gi|301384169|ref|ZP_07232587.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. tomato Max13]
gi|302063990|ref|ZP_07255531.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. tomato K40]
gi|302132648|ref|ZP_07258638.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. tomato NCPPB 1108]
gi|28852812|gb|AAO55884.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. tomato str. DC3000]
gi|213924671|gb|EEB58239.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. tomato T1]
Length = 341
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
IT+ ++G TN A+ L+ P + + I+ + VMGGA FN N +
Sbjct: 149 ITIAMLGPQTNLALALVQAPEITQGIKEVVVMGGA----HFNGGNIT------------- 191
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSE 199
P AEFN+F+DP AA VL SG+ +T +PLD T I SE
Sbjct: 192 ----PAAEFNLFADPHAAQIVLASGVKLTYVPLDVTHKILTSE 230
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 8/102 (7%)
Query: 547 AVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGN 606
AVD + +P S ITI GP TNLA + L + + Q + V G GN
Sbjct: 133 AVDYLIRTLTQAKPHS-ITIAMLGPQTNLA--LALVQAPEITQGIKEVVVMGGAHFNGGN 189
Query: 607 VFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
+ + AEFN+F DP AA+ V S +++ +PL + ++
Sbjct: 190 I-----TPAAEFNLFADPHAAQIVLASGVKLTYVPLDVTHKI 226
>gi|422298290|ref|ZP_16385900.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
avellanae BPIC 631]
gi|422654274|ref|ZP_16717020.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. actinidiae str. M302091]
gi|330967303|gb|EGH67563.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. actinidiae str. M302091]
gi|407990075|gb|EKG32249.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
avellanae BPIC 631]
Length = 341
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
IT+ ++G TN A+ L+ P + + I+ + VMGGA FN N +
Sbjct: 149 ITIAMLGPQTNLALALVQAPEITQGIKEVVVMGGA----HFNGGNIT------------- 191
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSE 199
P AEFN+F+DP AA VL SG+ +T +PLD T I SE
Sbjct: 192 ----PAAEFNLFADPHAAQIVLASGVKLTYVPLDVTHKILTSE 230
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 8/102 (7%)
Query: 547 AVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGN 606
AVD + +P S ITI GP TNLA + L + + Q + V G GN
Sbjct: 133 AVDYLIRTLTKAKPHS-ITIAMLGPQTNLA--LALVQAPEITQGIKEVVVMGGAHFNGGN 189
Query: 607 VFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
+ + AEFN+F DP AA+ V S +++ +PL + ++
Sbjct: 190 I-----TPAAEFNLFADPHAAQIVLASGVKLTYVPLDVTHKI 226
>gi|395444135|ref|YP_006384388.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas putida
ND6]
gi|388558132|gb|AFK67273.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas putida
ND6]
Length = 333
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 65/137 (47%), Gaps = 24/137 (17%)
Query: 77 APLRQPTAQQVLINAISAG---PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIR 133
A L Q A Q L++ +SA ITV ++G TN A+ L+ P + I+ + VMGGA
Sbjct: 118 ASLAQGNAVQYLVDTLSAAKPHSITVAMLGPQTNLALALIQRPGIVNGIKEVVVMGGA-- 175
Query: 134 SDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
FN N + P AEFN+++DP AA VL SG+ +T +PLD T
Sbjct: 176 --HFNGGNIT-----------------PVAEFNLYADPHAAEVVLASGVQLTYLPLDVTH 216
Query: 194 TIPVSENFFVEFERRQN 210
+ S + N
Sbjct: 217 KLLTSNARLKQLAAVSN 233
Score = 39.7 bits (91), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 16/121 (13%)
Query: 542 LRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLA----QIIGLQNSSSVIQDVYIVGGN 597
L Q AV + + +P S IT+ GP TNLA Q G+ N I++V ++GG
Sbjct: 120 LAQGNAVQYLVDTLSAAKPHS-ITVAMLGPQTNLALALIQRPGIVNG---IKEVVVMGGA 175
Query: 598 KGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHK 657
GN+ V AEFN++ DP AA+ V S +++ +PL + ++ + L +
Sbjct: 176 H---FNGGNITPV-----AEFNLYADPHAAEVVLASGVQLTYLPLDVTHKLLTSNARLKQ 227
Query: 658 L 658
L
Sbjct: 228 L 228
>gi|422589873|ref|ZP_16664532.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. morsprunorum str. M302280]
gi|330876779|gb|EGH10928.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. morsprunorum str. M302280]
Length = 341
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
IT+ ++G TN A+ L+ P + + I+ + VMGGA FN N +
Sbjct: 149 ITIAMLGPQTNLALALVQAPEITQGIKEVVVMGGA----HFNGGNIT------------- 191
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSE 199
P AEFN+F+DP AA VL SG+ +T +PLD T I SE
Sbjct: 192 ----PAAEFNLFADPHAAQIVLASGVKLTYVPLDVTHKILTSE 230
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 96/242 (39%), Gaps = 46/242 (19%)
Query: 407 KPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDD 466
+ ++ D D A D +AL+ L P EL N+ I + T GR+D
Sbjct: 31 RDLIIDTDPGADDVVALLLALASPEEL-NVLAITTVAGNVRLDKTSRNARLAREWAGRED 89
Query: 467 IPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAE 526
+PV G PK P + YA+ + G LP P A+
Sbjct: 90 VPVYAG--------APK-PLVRTPIYAENVHGQEG--------------LPGVPIHEPAK 126
Query: 527 NSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSS 586
G ++ N AVD + +P S ITI GP TNLA + L +
Sbjct: 127 -----GLAEGN---------AVDYLIRTLTKAKPHS-ITIAMLGPQTNLA--LALVQAPE 169
Query: 587 VIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQR 646
+ Q + V G GN+ + AEFN+F DP AA+ V S +++ +PL +
Sbjct: 170 ITQGIKEVVVMGGAHFNGGNI-----TPAAEFNLFADPHAAQIVLASGVKLTYVPLDVTH 224
Query: 647 RV 648
++
Sbjct: 225 KI 226
>gi|167034482|ref|YP_001669713.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas putida
GB-1]
gi|166860970|gb|ABY99377.1| Inosine/uridine-preferring nucleoside hydrolase [Pseudomonas putida
GB-1]
Length = 333
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 64/133 (48%), Gaps = 24/133 (18%)
Query: 81 QPTAQQVLINAISAG---PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCF 137
Q A Q LI+ + A ITV ++G TN A+ L+ P + K I+ + VMGGA F
Sbjct: 122 QGNAVQYLIDTLGAATPHSITVAMLGPQTNLALALIQRPDIVKGIKEVVVMGGA----HF 177
Query: 138 NSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPV 197
N N + P AEFN+++DP AA VL SG+ +T +PLD T +
Sbjct: 178 NGGNIT-----------------PAAEFNLYADPHAAEVVLASGVQLTYLPLDVTHKLLT 220
Query: 198 SENFFVEFERRQN 210
S+ + N
Sbjct: 221 SDARLKQLAAVNN 233
>gi|387894623|ref|YP_006324920.1| pyrimidine-specific ribonucleoside hydrolase RihA [Pseudomonas
fluorescens A506]
gi|387161118|gb|AFJ56317.1| pyrimidine-specific ribonucleoside hydrolase RihA [Pseudomonas
fluorescens A506]
Length = 342
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 24/124 (19%)
Query: 79 LRQPTAQQVLINAISAG---PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSD 135
L + A LIN +S+ IT+ ++G TN A+ L P + + I+ + VMGGA
Sbjct: 129 LAEGNAVDYLINTLSSAKPHSITIAMLGPQTNLALALTQAPEITQGIKEVVVMGGA---- 184
Query: 136 CFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTI 195
FN N + P AEFN+F+DP AA VL SG+ +T +PLD T +
Sbjct: 185 HFNGGNIT-----------------PVAEFNLFADPVAAEIVLKSGVKLTYLPLDVTHKV 227
Query: 196 PVSE 199
S+
Sbjct: 228 LTSD 231
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 62/127 (48%), Gaps = 8/127 (6%)
Query: 547 AVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGN 606
AVD + + S +P S ITI GP TNLA + L + + Q + V G GN
Sbjct: 134 AVDYLINTLSSAKPHS-ITIAMLGPQTNLA--LALTQAPEITQGIKEVVVMGGAHFNGGN 190
Query: 607 VFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPE 666
+ V AEFN+F DP+AA+ V +S +++ +PL + +V + L K+ D
Sbjct: 191 ITPV-----AEFNLFADPVAAEIVLKSGVKLTYLPLDVTHKVLTSDARLKKIADLNNNAS 245
Query: 667 SVFSQRL 673
V S L
Sbjct: 246 KVVSSIL 252
>gi|298244130|ref|ZP_06967936.1| Uridine nucleosidase [Ktedonobacter racemifer DSM 44963]
gi|297551611|gb|EFH85476.1| Uridine nucleosidase [Ktedonobacter racemifer DSM 44963]
Length = 310
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 63/146 (43%), Gaps = 28/146 (19%)
Query: 96 PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY 155
PIT+ G TN A L PH+ +NI+ I +MGGAI +GN+
Sbjct: 118 PITLVATGPLTNIATALEREPHIARNIKAISIMGGAI-----------------GLGNV- 159
Query: 156 PDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQ 215
P AEFNI+ DP AA V G P+T+IPL+ T ++ R A
Sbjct: 160 ----TPAAEFNIWFDPEAAQKVFQCGRPITMIPLEVTHQALATKEIMRRL-RSSGRRVAN 214
Query: 216 YCFQSLKMIRDTWS-----GSPPFHE 236
+ L DT+ +PP H+
Sbjct: 215 FAADLLAFFADTYEQVFGFSAPPVHD 240
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 70/134 (52%), Gaps = 19/134 (14%)
Query: 538 DDPELRQPL-------AVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQ 589
D P++ +P+ AVD+ ++ E IT++ GPLTN+A + + + + I+
Sbjct: 88 DGPDIPEPVMSLVSMHAVDLLIDLLLRAE--EPITLVATGPLTNIATALEREPHIARNIK 145
Query: 590 DVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVA 649
+ I+GG G GNV + AEFN++ DP AA+ VF+ I +IPL + +
Sbjct: 146 AISIMGGAIGL----GNV-----TPAAEFNIWFDPEAAQKVFQCGRPITMIPLEVTHQAL 196
Query: 650 SFFKILHKLRDRKK 663
+ +I+ +LR +
Sbjct: 197 ATKEIMRRLRSSGR 210
>gi|433546156|ref|ZP_20502491.1| nucleosidase [Brevibacillus agri BAB-2500]
gi|432182528|gb|ELK40094.1| nucleosidase [Brevibacillus agri BAB-2500]
Length = 310
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 62/131 (47%), Gaps = 24/131 (18%)
Query: 81 QP-TAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCF 137
QP +A Q LI+ I A P IT+ +GS TN A +M P + IE + MGGA+
Sbjct: 100 QPESATQFLISTIKANPGQITLITVGSMTNLARAIMAAPEIVTLIEQVVAMGGAVT---- 155
Query: 138 NSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPV 197
P + P AE NI +DP AA V+ SGIP+T++ LD T +
Sbjct: 156 -----------------VPGNRTPVAEANICADPEAAAFVMQSGIPMTLVGLDVTMQTLL 198
Query: 198 SENFFVEFERR 208
+ E+ R
Sbjct: 199 TREHLREWRAR 209
>gi|299472251|emb|CBN77221.1| inosine-adenosine-guanosine-nucleoside hydrolase [Ectocarpus
siliculosus]
Length = 399
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 56/114 (49%), Gaps = 19/114 (16%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
S P+TV G TN A L N P + I+ + +MGGAI D G
Sbjct: 154 SESPVTVVATGPLTNLAWVLDNFPEASRKIDKVLIMGGAI----------------DVPG 197
Query: 153 NLYPDDSNPY---AEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFV 203
N++ DD + AE+NIF DP AA V S + + + PLDAT +P+++ +
Sbjct: 198 NVFADDVEGFDGSAEWNIFWDPPAAKRVWDSDLELVLTPLDATNEVPITKETLL 251
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Query: 562 SKITILTNGPLTNLAQII-GLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKY---AE 617
S +T++ GPLTNLA ++ +S I V I+GG + GNVF + AE
Sbjct: 156 SPVTVVATGPLTNLAWVLDNFPEASRKIDKVLIMGGAI---DVPGNVFADDVEGFDGSAE 212
Query: 618 FNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
+N+F DP AAK V++S LE+ L PL V
Sbjct: 213 WNIFWDPPAAKRVWDSDLELVLTPLDATNEV 243
>gi|398996759|ref|ZP_10699609.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas sp. GM21]
gi|398126063|gb|EJM15511.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas sp. GM21]
Length = 342
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 62/124 (50%), Gaps = 24/124 (19%)
Query: 79 LRQPTAQQVLINAISAG---PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSD 135
L + A LI+ + A IT+ ++G TN A+ L+ P + + I+ + VMGGA
Sbjct: 129 LAEGNAVNYLIDTLKAAKPHSITIAMLGPQTNLALALIQEPEIVQGIKEVVVMGGA---- 184
Query: 136 CFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTI 195
FN N + P AEFN+F+DP AA VL SG+ +T +PLD T I
Sbjct: 185 HFNGGNIT-----------------PVAEFNLFADPQAAEVVLKSGVKLTYLPLDVTHKI 227
Query: 196 PVSE 199
SE
Sbjct: 228 LTSE 231
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 101/240 (42%), Gaps = 46/240 (19%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
++ D D A D +AL++ L P EL N++ + + T GRDD+P
Sbjct: 34 LIIDTDPGADDVVALLFALASPQEL-NIRALTTVAGNVRLDKTSRNARLAREWAGRDDVP 92
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V G PK P + YA+ I G L G+ P++
Sbjct: 93 VYAG--------APK-PLMRTPIYAENIHGKEG-------LSGVTVHEPKN--------- 127
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVI 588
G ++ N AV+ +++ +P S ITI GP TNLA + L ++
Sbjct: 128 ---GLAEGN---------AVNYLIDTLKAAKPHS-ITIAMLGPQTNLA--LALIQEPEIV 172
Query: 589 QDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
Q + V G GN+ V AEFN+F DP AA+ V +S +++ +PL + ++
Sbjct: 173 QGIKEVVVMGGAHFNGGNITPV-----AEFNLFADPQAAEVVLKSGVKLTYLPLDVTHKI 227
>gi|422681163|ref|ZP_16739433.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|331010507|gb|EGH90563.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
Length = 332
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 55/103 (53%), Gaps = 21/103 (20%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
IT+ ++G TN A+ L+ P + + I+ + VMGGA FN GN+
Sbjct: 149 ITIAMLGPQTNLALALVQAPEITQGIKEVVVMGGA----HFNG------------GNI-- 190
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSE 199
P AEFN+F+DP AA VL SG+ +T +PLD T I SE
Sbjct: 191 ---TPVAEFNLFADPHAAQIVLASGVKLTYVPLDVTHKILTSE 230
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 8/102 (7%)
Query: 547 AVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGN 606
AVD + +P S ITI GP TNLA + L + + Q + V G GN
Sbjct: 133 AVDYLIRTLSKAKPHS-ITIAMLGPQTNLA--LALVQAPEITQGIKEVVVMGGAHFNGGN 189
Query: 607 VFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
+ V AEFN+F DP AA+ V S +++ +PL + ++
Sbjct: 190 ITPV-----AEFNLFADPHAAQIVLASGVKLTYVPLDVTHKI 226
>gi|422639468|ref|ZP_16702897.1| inosine/uridine-preferring nucleoside hydrolase, partial
[Pseudomonas syringae Cit 7]
gi|330951861|gb|EGH52121.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae Cit 7]
Length = 265
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
IT+ ++G TN A+ L+ P + + I+ + VMGGA FN N +
Sbjct: 73 ITIAMLGPQTNLALALVQAPEITQGIKEVVVMGGA----HFNGGNIT------------- 115
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSE 199
P AEFN+F+DP AA VL SG+ +T +PLD T I SE
Sbjct: 116 ----PVAEFNLFADPHAAQIVLASGVKLTYVPLDVTHKILTSE 154
Score = 43.5 bits (101), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 8/102 (7%)
Query: 547 AVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGN 606
AVD + +P S ITI GP TNLA + L + + Q + V G GN
Sbjct: 57 AVDYLIRTLSKAKPHS-ITIAMLGPQTNLA--LALVQAPEITQGIKEVVVMGGAHFNGGN 113
Query: 607 VFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
+ V AEFN+F DP AA+ V S +++ +PL + ++
Sbjct: 114 ITPV-----AEFNLFADPHAAQIVLASGVKLTYVPLDVTHKI 150
>gi|115374819|ref|ZP_01462093.1| inosine-uridine preferring nucleoside hydrolase [Stigmatella
aurantiaca DW4/3-1]
gi|310817649|ref|YP_003950007.1| inosine/uridine-preferring nucleoside hydrolase [Stigmatella
aurantiaca DW4/3-1]
gi|115368128|gb|EAU67089.1| inosine-uridine preferring nucleoside hydrolase [Stigmatella
aurantiaca DW4/3-1]
gi|309390721|gb|ADO68180.1| Inosine/uridine-preferring nucleoside hydrolase [Stigmatella
aurantiaca DW4/3-1]
Length = 354
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 34/171 (19%)
Query: 96 PITVFVMGSHTNFAIFLMNNPHL--KKNIEHIYVMGGAIRS----DCFNSTNSSQSEQCD 149
P+TV +G TN + + + + I++MGGAI++ + FN
Sbjct: 121 PVTVLSIGGGTNLGMLFQTYTGVTWSQYLSRIFMMGGAIKAPGNVNAFN----------- 169
Query: 150 SIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERR- 208
PD +N AE+NIF DP A TV SG+PVT++PLDA+ + +F+
Sbjct: 170 ------PDYNNTVAEWNIFIDPLGANTVFQSGVPVTLVPLDASNQAQLDLDFYSTLMSMV 223
Query: 209 --------QNTYEAQYCFQSLKMIRDTWSGSPPFHEAYCMWDSFMAGVALS 251
QN A + F L +T + + Y +WD +A +AL+
Sbjct: 224 ASPQGNAIQNAVSA-FIFAGLSTQLETIAQPAQSVDGYYLWDP-LAAIALT 272
Score = 43.1 bits (100), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 68/156 (43%), Gaps = 16/156 (10%)
Query: 561 GSKITILTNGPLTNLAQIIGLQNS---SSVIQDVYIVGGNKGQDNEKGNVFTVP---SSK 614
GS +T+L+ G TNL + S + ++++GG GNV ++
Sbjct: 119 GSPVTVLSIGGGTNLGMLFQTYTGVTWSQYLSRIFMMGGAI---KAPGNVNAFNPDYNNT 175
Query: 615 YAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTP-----ESVF 669
AE+N+F+DPL A VF+S + + L+PL + L +P ++
Sbjct: 176 VAEWNIFIDPLGANTVFQSGVPVTLVPLDASNQAQLDLDFYSTLMSMVASPQGNAIQNAV 235
Query: 670 SQRLLQGLMT-LQQSHHSYHHVDT-FLGEVLGAVIL 703
S + GL T L+ VD +L + L A+ L
Sbjct: 236 SAFIFAGLSTQLETIAQPAQSVDGYYLWDPLAAIAL 271
>gi|293397300|ref|ZP_06641572.1| cytidine/uridine-specific hydrolase [Serratia odorifera DSM 4582]
gi|291420218|gb|EFE93475.1| cytidine/uridine-specific hydrolase [Serratia odorifera DSM 4582]
Length = 310
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 50/100 (50%), Gaps = 22/100 (22%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
S PIT+ V G TN A+ L P LK NIE I MGGA
Sbjct: 115 SPRPITLVVTGPMTNIALLLAQYPQLKANIERIVFMGGA--------------------- 153
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
L+ ++ P AEFNI+ DP AA VL SG+P+T+ L+ T
Sbjct: 154 -LHGGNATPVAEFNIYVDPEAAEMVLQSGVPLTMAGLNVT 192
>gi|340779692|ref|ZP_08699635.1| ribosylpyrimidine nucleosidase [Acetobacter aceti NBRC 14818]
Length = 309
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 51/104 (49%), Gaps = 21/104 (20%)
Query: 95 GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNL 154
G IT+ +G TN A+ L P L+ I I M GA +GN+
Sbjct: 116 GAITICAIGPMTNLALALSREPALRTRIGRIVTMSGAF----------------SEVGNI 159
Query: 155 YPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVS 198
P AEFNI+ DP AA VL SGIP+T++PLD T T+ S
Sbjct: 160 -----TPSAEFNIYVDPHAAAIVLESGIPITMLPLDVTHTLHTS 198
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 69/145 (47%), Gaps = 12/145 (8%)
Query: 501 GGFLDSDTLYGLARDLPRSPRRYTAENSVRFGASQDNDDP--ELRQPLAVD-VWKSIVES 557
GG D G R L R+P T + D DP AVD + +S++E+
Sbjct: 54 GGRPDIPVCRGAERPLLRAPVNATHVHGRTGFEGADLPDPVTMASSEHAVDFLIRSVMEN 113
Query: 558 IEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAE 617
P ITI GP+TNLA + L ++ + + G +E GN+ PS AE
Sbjct: 114 --PVGAITICAIGPMTNLA--LALSREPALRTRIGRIVTMSGAFSEVGNI--TPS---AE 164
Query: 618 FNMFLDPLAAKAVFESKLEIKLIPL 642
FN+++DP AA V ES + I ++PL
Sbjct: 165 FNIYVDPHAAAIVLESGIPITMLPL 189
>gi|237801020|ref|ZP_04589481.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|331023877|gb|EGI03934.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
syringae pv. oryzae str. 1_6]
Length = 341
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 56/114 (49%), Gaps = 21/114 (18%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
IT+ ++G TN A+ L+ P + + I+ + VMGGA FN N +
Sbjct: 149 ITIAMLGPQTNLALALVQAPEITQGIKEVVVMGGA----HFNGGNIT------------- 191
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQN 210
P AEFN+F+DP AA VL SG+ +T +PLD T I SE + N
Sbjct: 192 ----PAAEFNLFADPHAAQIVLVSGVKLTYVPLDVTHKILTSEQRLKQIAALNN 241
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 96/242 (39%), Gaps = 46/242 (19%)
Query: 407 KPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDD 466
+ ++ D D A D +AL+ L P EL N+ I + T GR++
Sbjct: 31 RDLIIDTDPGADDVVALLLALASPQEL-NVMAITTVAGNVRLDKTSRNARLAREWAGREE 89
Query: 467 IPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAE 526
+PV G PK P + YA+ I G LP P A+
Sbjct: 90 VPVYAG--------APK-PLVRTPIYAENIHGQEG--------------LPGVPIHEPAK 126
Query: 527 NSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSS 586
G ++ N AVD + +P S ITI GP TNLA + L +
Sbjct: 127 -----GLAEGN---------AVDYLIRTLSKAKPHS-ITIAMLGPQTNLA--LALVQAPE 169
Query: 587 VIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQR 646
+ Q + V G GN+ + AEFN+F DP AA+ V S +++ +PL +
Sbjct: 170 ITQGIKEVVVMGGAHFNGGNI-----TPAAEFNLFADPHAAQIVLVSGVKLTYVPLDVTH 224
Query: 647 RV 648
++
Sbjct: 225 KI 226
>gi|422617703|ref|ZP_16686404.1| inosine/uridine-preferring nucleoside hydrolase, partial
[Pseudomonas syringae pv. japonica str. M301072]
gi|330898084|gb|EGH29503.1| inosine/uridine-preferring nucleoside hydrolase, partial
[Pseudomonas syringae pv. japonica str. M301072]
Length = 194
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
IT+ ++G TN A+ L+ P + + I+ + VMGGA FN N +
Sbjct: 2 ITIAMLGPQTNLALALVQAPEITQGIKEVVVMGGA----HFNGGNIT------------- 44
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSE 199
P AEFN+F+DP AA VL SG+ +T +PLD T I SE
Sbjct: 45 ----PVAEFNLFADPHAAQIVLASGVKLTYVPLDVTHKILTSE 83
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Query: 564 ITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLD 623
ITI GP TNLA + L + + Q + V G GN+ V AEFN+F D
Sbjct: 2 ITIAMLGPQTNLA--LALVQAPEITQGIKEVVVMGGAHFNGGNITPV-----AEFNLFAD 54
Query: 624 PLAAKAVFESKLEIKLIPLHMQRRVAS 650
P AA+ V S +++ +PL + ++ +
Sbjct: 55 PHAAQIVLASGVKLTYVPLDVTHKILT 81
>gi|254513922|ref|ZP_05125983.1| inosine/uridine-preferring nucleoside hydrolase [gamma
proteobacterium NOR5-3]
gi|219676165|gb|EED32530.1| inosine/uridine-preferring nucleoside hydrolase [gamma
proteobacterium NOR5-3]
Length = 709
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 113/264 (42%), Gaps = 42/264 (15%)
Query: 91 AISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDS 150
A ++ P+TV G TN A +L P + + + VMGGA+ D+
Sbjct: 477 AAASAPVTVLATGPLTNIAQWLERYPGDRSKTDRLVVMGGAL----------------DA 520
Query: 151 IGNL----YPDDS-NPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEF 205
GN+ + DD+ N AE+NI+ DP AA VL S + + ++ LD T + V+ +F +F
Sbjct: 521 PGNIIVPGFTDDNPNTRAEWNIYVDPLAADKVLRSDLAIELVGLDVTNHVKVTTDFAAQF 580
Query: 206 ERRQNTYEAQYCFQSLKMIRDTW---SGSPPFHEAYCMWDSFMAGVALSIMLNSSSHNGE 262
+ R + A F + + W SG Y WD AL+++ G+
Sbjct: 581 KGRVDNPAA--AFWDAVLDANQWFIDSGE------YYFWDVL---AALAVIDRDRFCEGD 629
Query: 263 NACSEMEYMNLTVVTSNEPYG-ISDGSNPLIDGLEVPKFNVQKNGVHSGHVQTGMQDP-F 320
++Y +++P+G SD + P I + P+ + + G+++ F
Sbjct: 630 MLGLAVQYEE-----TDQPWGATSDKTMPEISSMGTPRRHFAAASAGVIEEREGVKNTLF 684
Query: 321 CLESGKAKCQDGYIKEVKGPEAVR 344
C + + ++ + +A R
Sbjct: 685 CRTTDAEAAFELFMNTLTSGDAAR 708
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 119/277 (42%), Gaps = 51/277 (18%)
Query: 408 PVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWA-TSATVDVVYDLLHMMG-RD 465
PVVFD DM+ D+ AL++L + P I L + VS++G A LL ++ +
Sbjct: 365 PVVFDTDMAIDDWAALLFLARHP--RIELLAVTVSASGEAHCEPGARNALALLDLVDPHN 422
Query: 466 DIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTA 525
+PV GD + P+ G + +P D D+L G+A
Sbjct: 423 QVPVSCGDSY----------PMDG-YFVFPVPWQK----DMDSLSGVA-----------I 456
Query: 526 ENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSS 585
SVR +P+ R V++ ++ + + +T+L GPLTN+AQ +
Sbjct: 457 TPSVR--------EPDTRH--GVELLHDVLAAAS--APVTVLATGPLTNIAQWLERYPGD 504
Query: 586 SVIQDVYIVGGNKGQDNEKGNVFTVPS------SKYAEFNMFLDPLAAKAVFESKLEIKL 639
D +V G G + GN+ VP + AE+N+++DPLAA V S L I+L
Sbjct: 505 RSKTDRLVVMG--GALDAPGNII-VPGFTDDNPNTRAEWNIYVDPLAADKVLRSDLAIEL 561
Query: 640 IPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQG 676
+ L + V + + R P + F +L
Sbjct: 562 VGLDVTNHVKVTTDFAAQFKGRVDNPAAAFWDAVLDA 598
>gi|398864547|ref|ZP_10620080.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas sp. GM78]
gi|398244846|gb|EJN30380.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas sp. GM78]
Length = 319
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 86/191 (45%), Gaps = 36/191 (18%)
Query: 79 LRQPTAQQVLINAISAG---PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSD 135
L + +A LI+ + A +T+ ++G TN A+ LM P + + I+ + +MGGA
Sbjct: 106 LAEGSAIDFLIDTLLAATPHSVTIAMLGPQTNLALALMREPQVVRGIKQVVIMGGA---- 161
Query: 136 CFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTI 195
FN N + P AEFN+F+DP AA VL SG+ + +PLD T I
Sbjct: 162 HFNGGNIT-----------------PVAEFNLFADPHAAEVVLKSGLDLVYLPLDVTHKI 204
Query: 196 PVSENFFVEFERRQNTYEA------QYCFQSLKMIRDTWSGSPPFHE----AYCMWDSFM 245
S+ + N Q C M R G P H+ AY + +
Sbjct: 205 LTSDARLAKIAALNNKASKLVGDILQECIGG-DMARYGIPGG-PVHDASVIAYLLKPALF 262
Query: 246 AGVALSIMLNS 256
+G +++++++S
Sbjct: 263 SGRSVNVVVDS 273
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 101/250 (40%), Gaps = 46/250 (18%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
++ D D A D +AL++ L P EL ++ + + + T L R+++P
Sbjct: 11 LIIDTDPGADDVIALLFALASPQEL-KVRALTTVAGNVSLDKTSRNARLALEWADREEVP 69
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V +A G K P+ + + L G+A PR+ AE S
Sbjct: 70 V-----YA-----------GASKPLVRTPIYAEHVHGEEGLPGVAV---YEPRQGLAEGS 110
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVI 588
A+D + + P S +TI GP TNLA + L V+
Sbjct: 111 ------------------AIDFLIDTLLAATPHS-VTIAMLGPQTNLA--LALMREPQVV 149
Query: 589 QDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
+ + V G GN+ V AEFN+F DP AA+ V +S L++ +PL + ++
Sbjct: 150 RGIKQVVIMGGAHFNGGNITPV-----AEFNLFADPHAAEVVLKSGLDLVYLPLDVTHKI 204
Query: 649 ASFFKILHKL 658
+ L K+
Sbjct: 205 LTSDARLAKI 214
>gi|398933742|ref|ZP_10665948.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas sp. GM48]
gi|398159783|gb|EJM48070.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas sp. GM48]
Length = 348
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 57/109 (52%), Gaps = 23/109 (21%)
Query: 93 SAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDS 150
SA P IT+ ++G TN A+ L+ P + + I+ + VMGGA FN N +
Sbjct: 150 SAKPHSITIAMLGPQTNLALALIQEPDIIRGIKEVVVMGGA----HFNGGNIT------- 198
Query: 151 IGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSE 199
P AEFN+F+DP AA VL SG+ +T +PLD T I SE
Sbjct: 199 ----------PVAEFNLFADPQAAEVVLKSGVKLTYLPLDVTHKILTSE 237
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 99/240 (41%), Gaps = 46/240 (19%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
++ D D A D +AL++ L P EL N++ + + T GR+++P
Sbjct: 40 LIIDTDPGADDVVALLFALASPDEL-NVRALTTVAGNVRLDKTSRNARLAREWAGREEVP 98
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V G PK P + YA+ I G L G+A PR A+ S
Sbjct: 99 VYAG--------APK-PLMRAPVYAEDIHGKEG-------LSGIAV---HEPREGLAKGS 139
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVI 588
A+ ++S +P S ITI GP TNLA + L +I
Sbjct: 140 ------------------AITYLIETLKSAKPHS-ITIAMLGPQTNLA--LALIQEPDII 178
Query: 589 QDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
+ + V G GN+ V AEFN+F DP AA+ V +S +++ +PL + ++
Sbjct: 179 RGIKEVVVMGGAHFNGGNITPV-----AEFNLFADPQAAEVVLKSGVKLTYLPLDVTHKI 233
>gi|239813841|ref|YP_002942751.1| inosine/uridine-preferring nucleoside hydrolase [Variovorax
paradoxus S110]
gi|239800418|gb|ACS17485.1| Inosine/uridine-preferring nucleoside hydrolase [Variovorax
paradoxus S110]
Length = 313
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 24/133 (18%)
Query: 77 APLRQPTAQQVLINAISAGP---ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIR 133
APL + A L+ + A P +T+ ++G TN A+ L P + + + + +M GA
Sbjct: 98 APLAEGHAVDYLVRTLRAAPEKSVTLAMLGPQTNLALALEQAPDIVRGLRELVLMAGA-- 155
Query: 134 SDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
FN N + P AEFN+F+DP AA VL G+P+T++PLD T
Sbjct: 156 --HFNGGNIT-----------------PTAEFNVFADPHAAEAVLKCGVPITMLPLDVTH 196
Query: 194 TIPVSENFFVEFE 206
I S+
Sbjct: 197 KILTSDERIARLR 209
Score = 46.6 bits (109), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 103/255 (40%), Gaps = 46/255 (18%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M ++ D D A D +AL++ L P E + ++ + + + T GR
Sbjct: 1 MHHTLIIDTDPGADDVIALLFALAAP-ESLAVQALTTVAGNVPLAKTSRNARLACEWAGR 59
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV +A G + + P+ + + + G+ P +P
Sbjct: 60 PDIPV-----YA-----------GAERPLRRTPIYAANIHGREGITGVTVHEPAAP---- 99
Query: 525 AENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS 584
L + AVD + + P +T+ GP TNLA + L+ +
Sbjct: 100 -----------------LAEGHAVDYLVRTLRA-APEKSVTLAMLGPQTNLA--LALEQA 139
Query: 585 SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHM 644
+++ + + G GN+ + AEFN+F DP AA+AV + + I ++PL +
Sbjct: 140 PDIVRGLRELVLMAGAHFNGGNI-----TPTAEFNVFADPHAAEAVLKCGVPITMLPLDV 194
Query: 645 QRRVASFFKILHKLR 659
++ + + + +LR
Sbjct: 195 THKILTSDERIARLR 209
>gi|398909229|ref|ZP_10654439.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas sp. GM49]
gi|398188414|gb|EJM75717.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas sp. GM49]
Length = 325
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 57/109 (52%), Gaps = 23/109 (21%)
Query: 93 SAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDS 150
SA P IT+ ++G TN A+ L+ P + + I + VMGGA FN N +
Sbjct: 127 SAKPHSITIAMLGPQTNLALALIQEPEIVQGIREVVVMGGA----HFNGGNIT------- 175
Query: 151 IGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSE 199
P AEFN+F+DP AA VL+SG+ +T +PLD T I SE
Sbjct: 176 ----------PVAEFNLFADPQAAEVVLNSGVKLTYLPLDVTHKILTSE 214
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 99/240 (41%), Gaps = 46/240 (19%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
++ D D A D +AL++ L P EL N++ + + T GR+++P
Sbjct: 17 LIIDTDPGADDVVALLFALASPDEL-NVRALTTVAGNVRLDKTSRNARLAREWAGREEVP 75
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V G P+ P + YA+ I G L G+A PR+ A+ S
Sbjct: 76 VYAG--------APR-PLMRTPIYAEDIHGKEG-------LSGIAV---HEPRQGLAKGS 116
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVI 588
A+ ++S +P S ITI GP TNLA + L ++
Sbjct: 117 ------------------AITYLIETLKSAKPHS-ITIAMLGPQTNLA--LALIQEPEIV 155
Query: 589 QDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
Q + V G GN+ V AEFN+F DP AA+ V S +++ +PL + ++
Sbjct: 156 QGIREVVVMGGAHFNGGNITPV-----AEFNLFADPQAAEVVLNSGVKLTYLPLDVTHKI 210
>gi|440745651|ref|ZP_20924941.1| inosine-uridine preferring nucleoside hydrolase [Pseudomonas
syringae BRIP39023]
gi|440372284|gb|ELQ09092.1| inosine-uridine preferring nucleoside hydrolase [Pseudomonas
syringae BRIP39023]
Length = 330
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 5/112 (4%)
Query: 93 SAGPITVFVMGSHTNFA--IFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDS 150
S PITV +G TN A + L + P K +E I M GA+ D N + +++
Sbjct: 120 SQDPITVLSLGGFTNIAKMLSLSSQPADFKMVEQIVAMAGAVYVDG-NVAALNNAQKAWD 178
Query: 151 IGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFF 202
G Y SN YAE+N+F DP AA TV S +P+T++PLD I + +++
Sbjct: 179 QGEAY--SSNHYAEWNVFVDPVAANTVFQSSLPLTLVPLDVCNQIILDASYW 228
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 122/271 (45%), Gaps = 60/271 (22%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLL---HM 461
M + V+ D DM D L++ YL+K + I++ GI V+ G D+ + ++ H+
Sbjct: 1 MNRKVIIDTDMGWDDVLSIAYLMKR--QDIDILGITVTGCG-----ETDLGWGVIIAQHL 53
Query: 462 MGRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPR 521
+G I LG V A G P +Y P D + + GL L +P
Sbjct: 54 LG---IGNRLGTVVAKGTDQP-------LEYDNRFPQPFKN--DMNDIMGLLGTL--NPA 99
Query: 522 RYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSK-ITILTNGPLTNLAQIIG 580
PEL ++ W+ + ++++ IT+L+ G TN+A+++
Sbjct: 100 TL----------------PELS---SLPAWEFMYQTVKNSQDPITVLSLGGFTNIAKMLS 140
Query: 581 LQNSSSVIQDVYIVGGNKGQDNEKGNVFTV-------------PSSKYAEFNMFLDPLAA 627
L + + + V + G GNV + S+ YAE+N+F+DP+AA
Sbjct: 141 LSSQPADFKMVEQIVAMAGAVYVDGNVAALNNAQKAWDQGEAYSSNHYAEWNVFVDPVAA 200
Query: 628 KAVFESKLEIKLIPLHMQRRV---ASFFKIL 655
VF+S L + L+PL + ++ AS+++++
Sbjct: 201 NTVFQSSLPLTLVPLDVCNQIILDASYWQLI 231
>gi|440229848|ref|YP_007343641.1| Inosine-uridine nucleoside N-ribohydrolase [Serratia marcescens
FGI94]
gi|440051553|gb|AGB81456.1| Inosine-uridine nucleoside N-ribohydrolase [Serratia marcescens
FGI94]
Length = 318
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 68/138 (49%), Gaps = 27/138 (19%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMN 114
+V+ + G+ LP G + AP +A +++ + S PIT+ V G TN A+ L
Sbjct: 80 HVHGSTGMGHTRLPTPGIEPAPH---SAVELIAGLLRTSPEPITLVVTGPMTNIALLLAQ 136
Query: 115 NPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAA 174
+P LK IE I MGGA L+ ++ P AEFNI+ DP AA
Sbjct: 137 HPELKPRIERIVFMGGA----------------------LHGGNATPVAEFNIYVDPEAA 174
Query: 175 YTVLHSGIPVTIIPLDAT 192
VL SG+P+T+ L+ T
Sbjct: 175 QMVLQSGVPLTMAGLNVT 192
>gi|440798276|gb|ELR19344.1| Inosine-uridine preferring nucleoside hydrolase [Acanthamoeba
castellanii str. Neff]
Length = 306
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 127/324 (39%), Gaps = 54/324 (16%)
Query: 407 KPVVFDI-DMSAGDFLALIYLLKLP-VELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
KP VF D + D A+ LLK VE+ L +S W ++ LLH M R
Sbjct: 12 KPKVFIFTDANTDDVQAIKLLLKYSNVEVAALIPDCAASATWN-------LFGLLHFMDR 64
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSP--RR 522
DDIP+ G +A E++ GC+YAK +PL G + +DT+ GL R P P R
Sbjct: 65 DDIPIWAGQAYASAEIDSG---DYGCRYAKTVPLFPKGKIWADTILGLNRRYPHPPENRN 121
Query: 523 YTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ 582
Y + F L Q +A T+GP+ L+
Sbjct: 122 YYPNYTTVFT--------NLPQAVAA-------------------TDGPVYFLS-----L 149
Query: 583 NSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+ S I +Y + N + SS +A + + DP AA+AVF S I L+PL
Sbjct: 150 GAFSTIDFLY-------RQNPWLVQRWIASSSWAALSSYTDPEAARAVFTSGTPITLVPL 202
Query: 643 HMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLG-AV 701
+ L+ +T E+ F LL + S Y D +L
Sbjct: 203 DATNAFQLSWDWLNSFGAIARTKEARFCHDLLALIKNNSASTSMYSLWDPLTAAILADPS 262
Query: 702 ILGGNPHLNQTYKIKSLEIISDGD 725
++ LN T I +++ + D
Sbjct: 263 LIVEQVTLNLTVAITGDQVVLEAD 286
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 94/253 (37%), Gaps = 61/253 (24%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPV--GQRLYV 58
M+RDDIP+ G + I D G Y CRY + +P+ +++
Sbjct: 61 FMDRDDIPIWAGQAYA---SAEI--DSGDYG------------CRYAKTVPLFPKGKIWA 103
Query: 59 NTNYGLRKAF-LPQGGRKYAPLRQPTAQQVLINAISA--GPITVFVMGSHTNFAIFLMNN 115
+T GL + + P R Y P T L A++A GP+ +G+ + N
Sbjct: 104 DTILGLNRRYPHPPENRNYYP-NYTTVFTNLPQAVAATDGPVYFLSLGAFSTIDFLYRQN 162
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L + ++DP AA
Sbjct: 163 PWLVQRWIASSSWAALSS----------------------------------YTDPEAAR 188
Query: 176 TVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPFH 235
V SG P+T++PLDAT +S ++ F T EA++C L +I++ + +
Sbjct: 189 AVFTSGTPITLVPLDATNAFQLSWDWLNSFGAIARTKEARFCHDLLALIKNNSAST---- 244
Query: 236 EAYCMWDSFMAGV 248
Y +WD A +
Sbjct: 245 SMYSLWDPLTAAI 257
>gi|157363880|ref|YP_001470647.1| purine nucleosidase [Thermotoga lettingae TMO]
gi|157314484|gb|ABV33583.1| Purine nucleosidase [Thermotoga lettingae TMO]
Length = 307
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 79/195 (40%), Gaps = 57/195 (29%)
Query: 6 DIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQRLYVNTNYGLR 65
D+PV G E +L N I PD+ G GL
Sbjct: 57 DLPVFAGREKPLLRNIVIAPDIHGQS-------------------------------GLE 85
Query: 66 KAFLPQGGRKYAPLRQPTAQQVLINAISA-GPITVFVMGSHTNFAIFLMNNPHLKKNIEH 124
A LP R P+ + A Q + I +T+ G TN A+ ++ +PHL +
Sbjct: 86 GANLPAMKR---PIEKTNAVQFMAETIEKYDDVTLVATGPLTNVALLILMHPHLIHKLNS 142
Query: 125 IYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPV 184
I +MGG I S GN+ P +EFNIF+D AA V SG+P+
Sbjct: 143 IVLMGGGI-----------------SFGNV-----TPVSEFNIFADAEAAKIVFESGVPI 180
Query: 185 TIIPLDATKTIPVSE 199
++PLD T + V++
Sbjct: 181 VMVPLDLTHQVIVTD 195
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 11/111 (9%)
Query: 540 PELRQPL-AVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGN 597
P +++P+ + + + E+IE +T++ GPLTN+A +I + + + + ++GG
Sbjct: 90 PAMKRPIEKTNAVQFMAETIEKYDDVTLVATGPLTNVALLILMHPHLIHKLNSIVLMGGG 149
Query: 598 KGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
GNV V +EFN+F D AAK VFES + I ++PL + +V
Sbjct: 150 ISF----GNVTPV-----SEFNIFADAEAAKIVFESGVPIVMVPLDLTHQV 191
>gi|409422081|ref|ZP_11259194.1| inosine-uridine preferring nucleoside hydrolase [Pseudomonas sp.
HYS]
Length = 323
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 63/130 (48%), Gaps = 24/130 (18%)
Query: 84 AQQVLINAISAG---PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNST 140
A + LI+ +S+ ITV ++G TN A+ L+ P + I+ + VMGGA FN
Sbjct: 115 AVRYLIDTLSSAKPHSITVAMLGPQTNLALALIEAPEIVNGIKEVVVMGGA----HFNGG 170
Query: 141 NSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSEN 200
N + P AEFN+F+DP AA VL SG+ +T +PLD T + SE
Sbjct: 171 NIT-----------------PVAEFNLFADPHAAEVVLKSGVKLTYLPLDVTHKVLTSEA 213
Query: 201 FFVEFERRQN 210
+ N
Sbjct: 214 RLKQIANLNN 223
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Query: 555 VESIEPGSKITILTNGPLTNLA-QIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSS 613
+ S +P S IT+ GP TNLA +I + I++V ++GG GN+ V
Sbjct: 123 LSSAKPHS-ITVAMLGPQTNLALALIEAPEIVNGIKEVVVMGG---AHFNGGNITPV--- 175
Query: 614 KYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
AEFN+F DP AA+ V +S +++ +PL + +V
Sbjct: 176 --AEFNLFADPHAAEVVLKSGVKLTYLPLDVTHKV 208
>gi|398900421|ref|ZP_10649478.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas sp. GM50]
gi|398181320|gb|EJM68890.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas sp. GM50]
Length = 342
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 64/124 (51%), Gaps = 24/124 (19%)
Query: 79 LRQPTAQQVLINAI-SAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSD 135
L + A LI+ + SA P IT+ ++G TN A+ L+ P + + I+ + +MGGA
Sbjct: 129 LAEGNAVNYLIDTLKSAKPHSITIAMLGPQTNLALALIQEPEIVQGIKEVVIMGGA---- 184
Query: 136 CFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTI 195
FN N + P AEFN+F+DP AA VL SG+ +T +PLD T I
Sbjct: 185 HFNGGNIT-----------------PVAEFNLFADPQAAEVVLKSGVKLTYLPLDVTHKI 227
Query: 196 PVSE 199
SE
Sbjct: 228 LTSE 231
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 101/240 (42%), Gaps = 46/240 (19%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
++ D D A D +AL++ L P EL N++ + + T GR+++P
Sbjct: 34 LIIDTDPGADDVVALLFALASPEEL-NIRALTTVAGNVRLDKTSRNARLAREWAGREEVP 92
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V G PK P + YA+ I G L T++ P++ AE +
Sbjct: 93 VYAG--------APK-PMMRTPIYAENIHGKEG--LSGVTVH--------EPKKGLAEGN 133
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVI 588
AV+ ++S +P S ITI GP TNLA + L ++
Sbjct: 134 ------------------AVNYLIDTLKSAKPHS-ITIAMLGPQTNLA--LALIQEPEIV 172
Query: 589 QDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
Q + V G GN+ V AEFN+F DP AA+ V +S +++ +PL + ++
Sbjct: 173 QGIKEVVIMGGAHFNGGNITPV-----AEFNLFADPQAAEVVLKSGVKLTYLPLDVTHKI 227
>gi|284041374|ref|YP_003391304.1| ribosylpyrimidine nucleosidase [Spirosoma linguale DSM 74]
gi|283820667|gb|ADB42505.1| Ribosylpyrimidine nucleosidase [Spirosoma linguale DSM 74]
Length = 312
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 73/154 (47%), Gaps = 32/154 (20%)
Query: 46 YRQA-IPVGQRLYVNTN----YGLRKAFLPQGGRKYAPLRQPTA-QQVLINAISAGPITV 99
YR A P+ ++L + N G+ LP+ ++ PL A Q+L A S IT+
Sbjct: 64 YRGADKPLFRKLIIADNVHGEMGMDGPVLPEPTLQHQPLSAIEAIAQIL--AESDEKITI 121
Query: 100 FVMGSHTNFAIFLMNNPHLKKNIEHIYVMGG-AIRSDCFNSTNSSQSEQCDSIGNLYPDD 158
G TN A FL+ PHLK IE I +MGG A R GN+
Sbjct: 122 VPTGPLTNIATFLLAYPHLKPKIERISLMGGGAFR------------------GNI---- 159
Query: 159 SNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
P AEFNIF DP AA V SG+P+T+ LD T
Sbjct: 160 -TPTAEFNIFVDPEAAAIVFKSGVPITMCGLDVT 192
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 15/128 (11%)
Query: 538 DDPELRQPLAVDVWKSIVESI-----EPGSKITILTNGPLTNLAQ-IIGLQNSSSVIQDV 591
D P L +P S +E+I E KITI+ GPLTN+A ++ + I+ +
Sbjct: 88 DGPVLPEPTLQHQPLSAIEAIAQILAESDEKITIVPTGPLTNIATFLLAYPHLKPKIERI 147
Query: 592 YIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASF 651
++GG +GN+ + AEFN+F+DP AA VF+S + I + L + + F
Sbjct: 148 SLMGGGAF----RGNI-----TPTAEFNIFVDPEAAAIVFKSGVPITMCGLDVTHKALVF 198
Query: 652 FKILHKLR 659
+ + + R
Sbjct: 199 QEDIDRFR 206
>gi|395651753|ref|ZP_10439603.1| putative inosine-uridine preferring nucleoside hydrolase
[Pseudomonas extremaustralis 14-3 substr. 14-3b]
Length = 342
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 21/103 (20%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
IT+ ++G TN A+ L P + + I+ + VMGGA FN N +
Sbjct: 150 ITIAMLGPQTNLALALTQAPEITQGIKEVVVMGGA----HFNGGNIT------------- 192
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSE 199
P AEFN+F+DP AA VL SG+ +T +PLD T + SE
Sbjct: 193 ----PVAEFNLFADPIAAEIVLKSGVKLTYLPLDVTHKVLTSE 231
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 547 AVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGN 606
A+D + + +P S ITI GP TNLA + L + + Q + V G GN
Sbjct: 134 AIDYLIKTLSTAKPHS-ITIAMLGPQTNLA--LALTQAPEITQGIKEVVVMGGAHFNGGN 190
Query: 607 VFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRD 660
+ V AEFN+F DP+AA+ V +S +++ +PL + +V + L ++ D
Sbjct: 191 ITPV-----AEFNLFADPIAAEIVLKSGVKLTYLPLDVTHKVLTSEARLKRIAD 239
>gi|374711105|ref|ZP_09715539.1| putative inosine-uridine preferring nucleoside hydrolase, partial
[Sporolactobacillus inulinus CASD]
Length = 309
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 104/251 (41%), Gaps = 33/251 (13%)
Query: 9 VGVGGEGGILPNGTILPDVGGYQPIIDQ-GMSTAGECRY--RQAIPVGQRLYVNTNYGLR 65
V V G I +G + P V + IID+ G T R R P + ++ +
Sbjct: 24 VKVTGVSVIPADGYLTPGVEASRKIIDRFGRETVEVARSNSRGHNPFPKEWRMHPFFVDA 83
Query: 66 KAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIE 123
L + G+ APL A + LI + + G T+ G T+ A L +P +++ IE
Sbjct: 84 LPILNESGKVEAPLSNLPAHEHLIQKVRENEGQTTLLCTGPLTDVARALDADPDIEEKIE 143
Query: 124 HIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIP 183
+ MGG ++S +GN+ + + AE+N F DP A V S IP
Sbjct: 144 RLIWMGGTLKS----------------VGNVQEPEHDGTAEWNAFWDPEAVARVWRSSIP 187
Query: 184 VTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPF-----HEAY 238
V ++ L++T +P++ +N + + + + I ++ PP + Y
Sbjct: 188 VRMVALESTNQVPLTVPI-------RNQWASLRKYSGIDFIGQCYAAVPPLVHFETNSTY 240
Query: 239 CMWDSFMAGVA 249
+WD A
Sbjct: 241 YLWDVLTTMAA 251
Score = 46.2 bits (108), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 89/208 (42%), Gaps = 18/208 (8%)
Query: 563 KITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMF 621
+ T+L GPLT++A+ + + I+ + +GG GNV AE+N F
Sbjct: 116 QTTLLCTGPLTDVARALDADPDIEEKIERLIWMGGTL---KSVGNVQEPEHDGTAEWNAF 172
Query: 622 LDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQ 681
DP A V+ S + ++++ L +V I ++ +K F + + L
Sbjct: 173 WDPEAVARVWRSSIPVRMVALESTNQVPLTVPIRNQWASLRKYSGIDFIGQCYAAVPPLV 232
Query: 682 QSHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKSL---EIISDGDISKVGQIIVNQEQ 738
H + +L +VL + GNP L + K+++ E S G I + E
Sbjct: 233 ---HFETNSTYYLWDVL-TTMAAGNPELVRAKKVRTFVHTEEPSQGRIEE-------SED 281
Query: 739 GKLVKVLESLNVAVYYDHFAEVLGDHKQ 766
G+ V+++ +N +++ E+ +Q
Sbjct: 282 GREVEIVYDVNADAFFESIVELAKKARQ 309
>gi|399002842|ref|ZP_10705520.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas sp. GM18]
gi|398123978|gb|EJM13505.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas sp. GM18]
Length = 342
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 24/124 (19%)
Query: 79 LRQPTAQQVLINAISAG---PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSD 135
L + A LI+ + A IT+ ++G TN A+ L+ P + + I+ + +MGGA
Sbjct: 129 LAKGNAVNYLIDTLKAAKPHSITIAMLGPQTNLALALIQEPEIVQGIKEVVIMGGA---- 184
Query: 136 CFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTI 195
FN N + P AEFN+F+DP AA VL SG+ +T +PLD T I
Sbjct: 185 HFNGGNIT-----------------PVAEFNLFADPQAAEVVLKSGVKLTYLPLDVTHKI 227
Query: 196 PVSE 199
SE
Sbjct: 228 LTSE 231
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 100/240 (41%), Gaps = 46/240 (19%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
++ D D A D +AL++ L P EL N++ + + T GR+++P
Sbjct: 34 LIIDTDPGADDVVALLFALASPEEL-NIRALTTVAGNVRLDKTSRNARLAREWAGREEVP 92
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V G PK P + YA+ I G L G+ P+
Sbjct: 93 VYAG--------APK-PLMRTPIYAENIHGKEG-------LSGVTVHEPKK--------- 127
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVI 588
G ++ N AV+ +++ +P S ITI GP TNLA + L ++
Sbjct: 128 ---GLAKGN---------AVNYLIDTLKAAKPHS-ITIAMLGPQTNLA--LALIQEPEIV 172
Query: 589 QDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
Q + V G GN+ V AEFN+F DP AA+ V +S +++ +PL + ++
Sbjct: 173 QGIKEVVIMGGAHFNGGNITPV-----AEFNLFADPQAAEVVLKSGVKLTYLPLDVTHKI 227
>gi|374320971|ref|YP_005074100.1| inosine-uridine nucleoside N-ribohydrolase [Paenibacillus terrae
HPL-003]
gi|357199980|gb|AET57877.1| inosine-uridine nucleoside N-ribohydrolase [Paenibacillus terrae
HPL-003]
Length = 318
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 102/248 (41%), Gaps = 40/248 (16%)
Query: 9 VGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAG-------ECRYRQAIPVGQRLYVNTN 61
V + G I +G + P + IID+ G R + P RL+ +
Sbjct: 29 VHLTGVSVIPADGYLEPATDASRKIIDRFGRNKGPVEVAKSNSRGKNPFPAAWRLH--SF 86
Query: 62 YGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLK 119
Y L + G+ APL A Q LI + + G + G T+ A L P ++
Sbjct: 87 YVDALPVLNESGQMEAPLSALPAHQHLIEKVRGAEGKTLLLFTGPLTDLARALDEAPDIE 146
Query: 120 KNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLH 179
I+ + MGG GN+ + + AE+N+F DP AAY V
Sbjct: 147 AKIDKLVWMGGTFEK-----------------GNVEEPEHDGTAEWNVFWDPEAAYRVWQ 189
Query: 180 SGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPF----- 234
SGI + ++ L++T +P++ +N + ++ ++ + + + ++G PP
Sbjct: 190 SGITIDLVALESTSKVPLTPAV-------RNRWASERRYEGVDFLGNCYAGCPPLVYSET 242
Query: 235 HEAYCMWD 242
+ Y +WD
Sbjct: 243 NSTYYLWD 250
Score = 46.2 bits (108), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 147/358 (41%), Gaps = 60/358 (16%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGI-LVSSTGWATSATVDVVYDLLHMMGRDDI 467
V F+ D D ++L LL++ E ++L G+ ++ + G+ AT D ++ GR+
Sbjct: 6 VYFNHDGGVDDLVSLFMLLQM--EQVHLTGVSVIPADGYLEPAT-DASRKIIDRFGRNKG 62
Query: 468 PVGLGDVFAVGEVNPKFPPIGGCK--YAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTA 525
PV + + G+ NP FP Y A+P+
Sbjct: 63 PVEVAKSNSRGK-NP-FPAAWRLHSFYVDALPVL-------------------------- 94
Query: 526 ENSVRFGASQDNDDPELRQPL-AVDVWKSIVESIEPGS-KITILTNGPLTNLAQIIG-LQ 582
N+ ++ PL A+ + ++E + K +L GPLT+LA+ +
Sbjct: 95 -----------NESGQMEAPLSALPAHQHLIEKVRGAEGKTLLLFTGPLTDLARALDEAP 143
Query: 583 NSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+ + I + +GG EKGNV AE+N+F DP AA V++S + I L+ L
Sbjct: 144 DIEAKIDKLVWMGGT----FEKGNVEEPEHDGTAEWNVFWDPEAAYRVWQSGITIDLVAL 199
Query: 643 HMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVI 702
+V + ++ ++ F G L S + + +L +VL
Sbjct: 200 ESTSKVPLTPAVRNRWASERRYEGVDFLGNCYAGCPPLVYSETNSTY---YLWDVLTTAS 256
Query: 703 LGGNPHLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEV 760
+ G P + + K +I+DG G+ V Q G+ V ++ + ++ + A++
Sbjct: 257 V-GRPDIVKK-KTVHCSVIADG--PSQGR-TVEQADGRPVNLVYDTDPEAFFTYMADL 309
>gi|288550053|ref|ZP_05969123.2| cytidine/uridine-specific hydrolase [Enterobacter cancerogenus ATCC
35316]
gi|288316569|gb|EFC55507.1| cytidine/uridine-specific hydrolase [Enterobacter cancerogenus ATCC
35316]
Length = 315
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 68/138 (49%), Gaps = 29/138 (21%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQP-TAQQVLINAI--SAGPITVFVMGSHTNFAIFLMN 114
V+ GL LP+ +AP QP TA +++ + SA P+T+ G TN A+ L +
Sbjct: 85 VHGESGLDGPALPEPA--FAP--QPCTAVELMAKVLRESAEPVTLVATGPQTNVALLLNS 140
Query: 115 NPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAA 174
+P L +NI I +MGGA+ +GN P AEFNIF DP AA
Sbjct: 141 HPELHRNIAQIVIMGGAM-----------------GLGNW-----TPAAEFNIFVDPEAA 178
Query: 175 YTVLHSGIPVTIIPLDAT 192
V SG+P+ + LD T
Sbjct: 179 EIVFQSGLPIVMAGLDVT 196
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 106/264 (40%), Gaps = 67/264 (25%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M +P++ D D D +AL+ L P +++K + S+ T+ V +L ++ R
Sbjct: 5 MAQPIILDCDPGHDDAIALVLALASPE--LDVKAVTSSAGNQTPEKTLRNVLRMLTLLKR 62
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV +GG L L R+L
Sbjct: 63 TDIPV------------------------------AGGALKP-----LMREL------II 81
Query: 525 AENSVRFGASQDNDDPELRQP-------LAVDVWKSIV-ESIEPGSKITILTNGPLTNLA 576
A+N D P L +P AV++ ++ ES EP +T++ GP TN+A
Sbjct: 82 ADN---VHGESGLDGPALPEPAFAPQPCTAVELMAKVLRESAEP---VTLVATGPQTNVA 135
Query: 577 QIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ I + I+GG G N + AEFN+F+DP AA+ VF+S L
Sbjct: 136 LLLNSHPELHRNIAQIVIMGGAMGLGN---------WTPAAEFNIFVDPEAAEIVFQSGL 186
Query: 636 EIKLIPLHMQRRVASFFKILHKLR 659
I + L + R + + + R
Sbjct: 187 PIVMAGLDVTHRAQIMAQDIERFR 210
>gi|229591585|ref|YP_002873704.1| putative inosine-uridine preferring nucleoside hydrolase
[Pseudomonas fluorescens SBW25]
gi|229363451|emb|CAY50654.1| putative inosine-uridine preferring nucleoside hydrolase
[Pseudomonas fluorescens SBW25]
Length = 342
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 60/124 (48%), Gaps = 24/124 (19%)
Query: 79 LRQPTAQQVLINAISAG---PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSD 135
L + A LI +S IT+ ++G TN A+ L P + + I+ + VMGGA
Sbjct: 129 LAEGNAVDYLIKTLSTAKPHSITIAMLGPQTNLALALTQAPEITQGIKEVVVMGGA---- 184
Query: 136 CFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTI 195
FN N + P AEFN+F+DP AA VL SG+ +T +PLD T +
Sbjct: 185 HFNGGNIT-----------------PVAEFNLFADPVAAEIVLKSGVKLTYLPLDVTHKV 227
Query: 196 PVSE 199
SE
Sbjct: 228 LTSE 231
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 61/127 (48%), Gaps = 8/127 (6%)
Query: 547 AVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGN 606
AVD + + +P S ITI GP TNLA + L + + Q + V G GN
Sbjct: 134 AVDYLIKTLSTAKPHS-ITIAMLGPQTNLA--LALTQAPEITQGIKEVVVMGGAHFNGGN 190
Query: 607 VFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPE 666
+ V AEFN+F DP+AA+ V +S +++ +PL + +V + L + D K
Sbjct: 191 ITPV-----AEFNLFADPVAAEIVLKSGVKLTYLPLDVTHKVLTSEARLKGIADLKNNAS 245
Query: 667 SVFSQRL 673
V S L
Sbjct: 246 KVVSDIL 252
>gi|398870461|ref|ZP_10625785.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas sp. GM74]
gi|398208231|gb|EJM94968.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas sp. GM74]
Length = 325
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 65/124 (52%), Gaps = 24/124 (19%)
Query: 79 LRQPTAQQVLINAI-SAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSD 135
L + +A LI+ + SA P IT+ ++G TN A+ L+ P + + I+ + VMGGA
Sbjct: 112 LAKGSAITYLIDTLKSAEPHSITIAMLGPQTNLALALIQEPGIVQGIKEVVVMGGA---- 167
Query: 136 CFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTI 195
FN N + P AEFN+F+DP AA VL SG+ +T +PLD T I
Sbjct: 168 HFNGGNIT-----------------PVAEFNLFADPQAAEVVLKSGVKLTYLPLDVTHKI 210
Query: 196 PVSE 199
SE
Sbjct: 211 LTSE 214
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 100/240 (41%), Gaps = 46/240 (19%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
++ D D A D +AL++ L P EL N++ + + T GR+++P
Sbjct: 17 LIIDTDPGADDVVALLFALASPEEL-NVRALTTVAGNVRLDKTSRNARLAREWAGREEVP 75
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V G P+ P + YA+ I G L G+A PR+ A+ S
Sbjct: 76 VYAG--------APR-PLMRTPVYAEDIHGKEG-------LSGIAV---HEPRKGLAKGS 116
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVI 588
A+ ++S EP S ITI GP TNLA + L ++
Sbjct: 117 ------------------AITYLIDTLKSAEPHS-ITIAMLGPQTNLA--LALIQEPGIV 155
Query: 589 QDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
Q + V G GN+ V AEFN+F DP AA+ V +S +++ +PL + ++
Sbjct: 156 QGIKEVVVMGGAHFNGGNITPV-----AEFNLFADPQAAEVVLKSGVKLTYLPLDVTHKI 210
>gi|358064697|ref|ZP_09151259.1| hypothetical protein HMPREF9473_03322 [Clostridium hathewayi
WAL-18680]
gi|356697032|gb|EHI58629.1| hypothetical protein HMPREF9473_03322 [Clostridium hathewayi
WAL-18680]
Length = 328
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 77/170 (45%), Gaps = 47/170 (27%)
Query: 88 LINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQS 145
L+N + S PIT+ + G TN A+ L + + ++IE I MGG + FNST +S
Sbjct: 123 LVNTLLHSDEPITLVLSGPMTNLAMALRIDARITEHIEEIVFMGGGFKE--FNSTAAS-- 178
Query: 146 EQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTI---------- 195
EFNI++DP AA VL G+P+T++PLDAT
Sbjct: 179 ------------------EFNIWNDPEAAQIVLTCGVPITMVPLDATHKANFTLEDAGEL 220
Query: 196 -----PVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPFHEAYCM 240
P ++ F E+R Y A FQ ++ + S P H+A +
Sbjct: 221 RGWKKPAADFFATIIEKRVAAYNA---FQPQEL-----ADSAPIHDALAL 262
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 59/119 (49%), Gaps = 13/119 (10%)
Query: 553 SIVESIEPGSKITILTNGPLTNLAQIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVP 611
+++ S EP IT++ +GP+TNLA + + + I+++ +GG + N
Sbjct: 126 TLLHSDEP---ITLVLSGPMTNLAMALRIDARITEHIEEIVFMGGGFKEFN--------- 173
Query: 612 SSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFS 670
S+ +EFN++ DP AA+ V + I ++PL + + +LR KK F+
Sbjct: 174 STAASEFNIWNDPEAAQIVLTCGVPITMVPLDATHKANFTLEDAGELRGWKKPAADFFA 232
>gi|426410295|ref|YP_007030394.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas sp.
UW4]
gi|426268512|gb|AFY20589.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas sp.
UW4]
Length = 342
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 65/124 (52%), Gaps = 24/124 (19%)
Query: 79 LRQPTAQQVLINAI-SAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSD 135
L + +A LI+ + SA P IT+ ++G TN A+ L+ P + + I+ + VMGGA
Sbjct: 129 LAKGSAITYLIDTLKSAEPHSITIAMLGPQTNLALALIQEPGIVQGIKEVVVMGGA---- 184
Query: 136 CFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTI 195
FN N + P AEFN+F+DP AA VL SG+ +T +PLD T I
Sbjct: 185 HFNGGNIT-----------------PVAEFNLFADPQAAEVVLKSGVKLTYLPLDVTHKI 227
Query: 196 PVSE 199
SE
Sbjct: 228 LTSE 231
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 99/240 (41%), Gaps = 46/240 (19%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
++ D D A D +AL++ L P EL N++ + + T GR+++P
Sbjct: 34 LIIDTDPGADDVVALLFALASPDEL-NVRALTTVAGNVRLDKTSRNARLAREWAGREEVP 92
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V G PK P + YA+ I + GL+ P++ A+ S
Sbjct: 93 VYAG--------APK-PLMRTPIYAENI----------HGMEGLSGIAVHEPKQGLAKGS 133
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVI 588
A+ ++S EP S ITI GP TNLA + L ++
Sbjct: 134 ------------------AITYLIDTLKSAEPHS-ITIAMLGPQTNLA--LALIQEPGIV 172
Query: 589 QDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
Q + V G GN+ V AEFN+F DP AA+ V +S +++ +PL + ++
Sbjct: 173 QGIKEVVVMGGAHFNGGNITPV-----AEFNLFADPQAAEVVLKSGVKLTYLPLDVTHKI 227
>gi|408480935|ref|ZP_11187154.1| putative inosine-uridine preferring nucleoside hydrolase
[Pseudomonas sp. R81]
Length = 325
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 21/103 (20%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
IT+ ++G TN A+ L P + + I+ + VMGGA FN N +
Sbjct: 133 ITIAMLGPQTNLALALTQAPEITQGIKEVVVMGGA----HFNGGNIT------------- 175
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSE 199
P AEFN+F+DP AA VL SG+ +T +PLD T + SE
Sbjct: 176 ----PVAEFNLFADPVAAEIVLKSGVKLTYLPLDVTHKVLTSE 214
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 61/127 (48%), Gaps = 8/127 (6%)
Query: 547 AVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGN 606
AVD + + +P S ITI GP TNLA + L + + Q + V G GN
Sbjct: 117 AVDYLIKTLSTAKPHS-ITIAMLGPQTNLA--LALTQAPEITQGIKEVVVMGGAHFNGGN 173
Query: 607 VFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPE 666
+ V AEFN+F DP+AA+ V +S +++ +PL + +V + L K+ D K
Sbjct: 174 ITPV-----AEFNLFADPVAAEIVLKSGVKLTYLPLDVTHKVLTSEARLKKIADIKNNAS 228
Query: 667 SVFSQRL 673
V L
Sbjct: 229 KVVGDIL 235
>gi|398862043|ref|ZP_10617656.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas sp. GM79]
gi|398231317|gb|EJN17308.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas sp. GM79]
Length = 342
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
IT+ ++G TN A+ L+ P + + I+ + +MGGA FN N +
Sbjct: 150 ITIAMLGPQTNLALALIQEPEIVQGIKEVVIMGGA----HFNGGNIT------------- 192
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSE 199
P AEFN+F+DP AA VL SG+ +T +PLD T I SE
Sbjct: 193 ----PVAEFNLFADPQAAEVVLKSGVKLTYLPLDVTHKILTSE 231
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 101/240 (42%), Gaps = 46/240 (19%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
++ D D A D +AL++ L P EL N++ + + T GR+++P
Sbjct: 34 LIIDTDPGADDVVALLFALASPDEL-NIRALTTVAGNVRLDKTSRNARLAREWAGREEVP 92
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V G PK P + YA+ I G L T++ P++ AE +
Sbjct: 93 VYAG--------APK-PMMRTPIYAENIHGKEG--LSGVTVH--------EPKKGLAEGN 133
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVI 588
AV+ +++ +P S ITI GP TNLA + L ++
Sbjct: 134 ------------------AVNYLIDTLKTAKPHS-ITIAMLGPQTNLA--LALIQEPEIV 172
Query: 589 QDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
Q + V G GN+ V AEFN+F DP AA+ V +S +++ +PL + ++
Sbjct: 173 QGIKEVVIMGGAHFNGGNITPV-----AEFNLFADPQAAEVVLKSGVKLTYLPLDVTHKI 227
>gi|398876284|ref|ZP_10631441.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas sp. GM67]
gi|398204689|gb|EJM91485.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas sp. GM67]
Length = 342
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
IT+ ++G TN A+ L+ P + + I+ + +MGGA FN N +
Sbjct: 150 ITIAMLGPQTNLALALIQEPEIVQGIKEVVIMGGA----HFNGGNIT------------- 192
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSE 199
P AEFN+F+DP AA VL SG+ +T +PLD T I SE
Sbjct: 193 ----PVAEFNLFADPQAAEVVLKSGVKLTYLPLDVTHKILTSE 231
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 100/240 (41%), Gaps = 46/240 (19%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
++ D D A D +AL++ L P EL N++ + + T GR+D+P
Sbjct: 34 LIIDTDPGADDVVALLFALASPEEL-NIRALTTVAGNVRLDKTSRNARLAREWAGREDVP 92
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V G PK P + YA+ I G L G+ P+
Sbjct: 93 VYAG--------APK-PLMRTPIYAENIHGKEG-------LSGVTVHEPKQ--------- 127
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVI 588
G ++ N AV+ +++ +P S ITI GP TNLA + L ++
Sbjct: 128 ---GLAKGN---------AVNYLIDTLKTAKPHS-ITIAMLGPQTNLA--LALIQEPEIV 172
Query: 589 QDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
Q + V G GN+ V AEFN+F DP AA+ V +S +++ +PL + ++
Sbjct: 173 QGIKEVVIMGGAHFNGGNITPV-----AEFNLFADPQAAEVVLKSGVKLTYLPLDVTHKI 227
>gi|398881385|ref|ZP_10636380.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas sp. GM60]
gi|398201713|gb|EJM88585.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas sp. GM60]
Length = 342
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
IT+ ++G TN A+ L+ P + + I+ + +MGGA FN N +
Sbjct: 150 ITIAMLGPQTNLALALIQEPEIVQGIKEVVIMGGA----HFNGGNIT------------- 192
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSE 199
P AEFN+F+DP AA VL SG+ +T +PLD T I SE
Sbjct: 193 ----PVAEFNLFADPQAAEVVLKSGVKLTYLPLDVTHKILTSE 231
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 100/240 (41%), Gaps = 46/240 (19%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
++ D D A D +AL++ L P EL N++ + + T GR+++P
Sbjct: 34 LIIDTDPGADDVVALLFALASPEEL-NIRALTTVAGNVRLDKTSRNARLAREWAGREEVP 92
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V G PK P + YA+ I G L G+ P+
Sbjct: 93 VYAG--------APK-PLMRTPIYAENIHGKEG-------LSGVTVHEPKQ--------- 127
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVI 588
G ++ N AV+ +++ +P S ITI GP TNLA + L ++
Sbjct: 128 ---GLAKGN---------AVNYLIDTLKTAKPHS-ITIAMLGPQTNLA--LALIQEPEIV 172
Query: 589 QDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
Q + V G GN+ V AEFN+F DP AA+ V +S +++ +PL + ++
Sbjct: 173 QGIKEVVIMGGAHFNGGNITPV-----AEFNLFADPQAAEVVLKSGVKLTYLPLDVTHKI 227
>gi|320527367|ref|ZP_08028549.1| inosine-uridine preferring nucleoside hydrolase [Solobacterium
moorei F0204]
gi|320132224|gb|EFW24772.1| inosine-uridine preferring nucleoside hydrolase [Solobacterium
moorei F0204]
Length = 319
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 49/101 (48%), Gaps = 22/101 (21%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
S P+T+ G TN A L+ +P LK I I +MGG +R+ G
Sbjct: 118 SEKPVTIIATGPQTNVAALLLTHPELKSKIGRISIMGGGLRN-----------------G 160
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
N P AEFNIF DP AA V SGIP+T+ LD T+
Sbjct: 161 NW-----TPAAEFNIFEDPEAAQIVFTSGIPLTMCGLDVTE 196
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 69/166 (41%), Gaps = 22/166 (13%)
Query: 503 FLDSDTLYGLARDLPRSPRRYTAENSVRFGASQDNDDPELRQPL-------AVDVWKSIV 555
L D R+LP TA N F D P + +P +VD+ ++
Sbjct: 59 LLGIDAPIAKGRELPLLSPLITAGN---FHGESGLDGPAIPEPCMQLSELSSVDLMAKVL 115
Query: 556 ESIEPGSKITILTNGPLTNLAQIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSK 614
E +TI+ GP TN+A ++ S I + I+GG N +
Sbjct: 116 RESE--KPVTIIATGPQTNVAALLLTHPELKSKIGRISIMGGGLRNGN---------WTP 164
Query: 615 YAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRD 660
AEFN+F DP AA+ VF S + + + L + + + + ++R+
Sbjct: 165 AAEFNIFEDPEAAQIVFTSGIPLTMCGLDVTEKAIVYPEDEKRIRE 210
>gi|414342211|ref|YP_006983732.1| inosine-uridine preferring nucleoside hydrolase [Gluconobacter
oxydans H24]
gi|411027546|gb|AFW00801.1| inosine-uridine preferring nucleoside hydrolase [Gluconobacter
oxydans H24]
gi|453328892|dbj|GAC88891.1| inosine-uridine preferring nucleoside hydrolase [Gluconobacter
thailandicus NBRC 3255]
Length = 317
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 67/152 (44%), Gaps = 22/152 (14%)
Query: 41 AGECRYRQAIPVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVF 100
AG R P+ +V+ G+ A LP+ + + T ++ AG IT+
Sbjct: 70 AGAARPLYKAPISAE-HVHGETGMAGANLPEPHLRARSVDAATHIIDVLRKEPAGTITLV 128
Query: 101 VMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSN 160
+G TN A L + P + I H+ MGGA R GN+
Sbjct: 129 CLGPMTNLAHALTHAPDIAPKIAHLVAMGGAQREG----------------GNI-----T 167
Query: 161 PYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
P AEFN F DP AA V+ +GIP T++PLD T
Sbjct: 168 PTAEFNFFVDPHAAKIVMAAGIPTTLLPLDVT 199
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 107/268 (39%), Gaps = 52/268 (19%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
++ D D D +A++ L P + ++ I + S T LL + GR+D+P
Sbjct: 10 IIIDTDPGQDDAVAILLALASPE--LKVESITTVAGNVPLSQTTKNACALLELAGREDVP 67
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V YA G AR L ++P +
Sbjct: 68 V----------------------YA-----------------GAARPLYKAPISAEHVHG 88
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESI--EPGSKITILTNGPLTNLAQIIGLQNSSS 586
A + +P LR +VD I++ + EP IT++ GP+TNLA L ++
Sbjct: 89 ETGMAGANLPEPHLRA-RSVDAATHIIDVLRKEPAGTITLVCLGPMTNLAH--ALTHAPD 145
Query: 587 VIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQR 646
+ + + G E GN+ + AEFN F+DP AAK V + + L+PL +
Sbjct: 146 IAPKIAHLVAMGGAQREGGNI-----TPTAEFNFFVDPHAAKIVMAAGIPTTLLPLDVTH 200
Query: 647 RVASFFKILHKLRDRKKTPESVFSQRLL 674
R + + L + D KTP R+L
Sbjct: 201 RAIATPRRLAPIAD-LKTPVGDMVVRML 227
>gi|311280452|ref|YP_003942683.1| ribosylpyrimidine nucleosidase [Enterobacter cloacae SCF1]
gi|308749647|gb|ADO49399.1| Ribosylpyrimidine nucleosidase [Enterobacter cloacae SCF1]
Length = 311
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 68/138 (49%), Gaps = 29/138 (21%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQP-TAQQVLINAI--SAGPITVFVMGSHTNFAIFLMN 114
V+ GL LP+ G +AP QP TA +++ + S P+T+ G TN A+ L +
Sbjct: 81 VHGESGLDGPALPEPG--FAP--QPCTAVELMAKTLRESPEPVTLVSTGPQTNVALLLNS 136
Query: 115 NPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAA 174
+P L NI I +MGGA+ ++GN P AEFNIF DP AA
Sbjct: 137 HPELHSNIARIVIMGGAM-----------------TLGNW-----TPAAEFNIFVDPEAA 174
Query: 175 YTVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 175 EIVFQSGIPVVMAGLDVT 192
Score = 46.2 bits (108), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 106/264 (40%), Gaps = 67/264 (25%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D + ++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MTHPIIIDCDPGHDDAITIVLALASPE--LSVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV A G V P L R+L
Sbjct: 59 SDIPV------AGGAVKP-----------------------------LMREL------II 77
Query: 525 AENSVRFGASQDNDDPELRQP-------LAVDVW-KSIVESIEPGSKITILTNGPLTNLA 576
A+N D P L +P AV++ K++ ES EP +T+++ GP TN+A
Sbjct: 78 ADN---VHGESGLDGPALPEPGFAPQPCTAVELMAKTLRESPEP---VTLVSTGPQTNVA 131
Query: 577 QIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ S I + I+GG N + AEFN+F+DP AA+ VF+S +
Sbjct: 132 LLLNSHPELHSNIARIVIMGGAMTLGN---------WTPAAEFNIFVDPEAAEIVFQSGI 182
Query: 636 EIKLIPLHMQRRVASFFKILHKLR 659
+ + L + + + + + R
Sbjct: 183 PVVMAGLDVTHKAQIHAEDIERFR 206
>gi|297195758|ref|ZP_06913156.1| inosine-uridine preferring nucleoside hydrolase [Streptomyces
pristinaespiralis ATCC 25486]
gi|197722227|gb|EDY66135.1| inosine-uridine preferring nucleoside hydrolase [Streptomyces
pristinaespiralis ATCC 25486]
Length = 314
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 64/146 (43%), Gaps = 28/146 (19%)
Query: 96 PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY 155
P+T+ G TN A+ L +P ++I I +MGG+I +GN
Sbjct: 118 PVTLVPTGPLTNVALLLTRHPDSARHIREIVLMGGSI-----------------GLGN-- 158
Query: 156 PDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQ 215
+ P AEFNI DP AA V SG+PVT+ LD T + E R +T A+
Sbjct: 159 ---TTPAAEFNIHVDPEAADIVFGSGLPVTMCGLDVTHQALATAEVLARLE-RLDTRLAR 214
Query: 216 YCFQSLKMI----RDTWS-GSPPFHE 236
C + + R W +PP H+
Sbjct: 215 LCVELMTYFGSAYRRLWGFAAPPLHD 240
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 110/257 (42%), Gaps = 55/257 (21%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLP-VELINLKGILVSSTGWATSATVDVVYDLLHMMG 463
M PV+ D D D LAL+ P VEL+ + + + T T+ V + + G
Sbjct: 1 MPVPVIIDCDPGHDDALALMLAAGDPAVELLAITTVAGNQTLEKTTLNARRVCTVAGITG 60
Query: 464 RDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRY 523
+PV GC PL GG + ++ GL D PR P
Sbjct: 61 ---VPVA-----------------AGCARPLVQPLRVGGDVHGES--GL--DGPRFP--- 93
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVES-IEPGSKITILTNGPLTNLAQIIGLQ 582
E +V AVD+ ++ + EP +T++ GPLTN+A ++
Sbjct: 94 --EPAVEAVPEH-----------AVDLMHRVLSAHREP---VTLVPTGPLTNVALLLTRH 137
Query: 583 -NSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
+S+ I+++ ++GG+ G N ++ AEFN+ +DP AA VF S L + +
Sbjct: 138 PDSARHIREIVLMGGSIGLGN---------TTPAAEFNIHVDPEAADIVFGSGLPVTMCG 188
Query: 642 LHMQRRVASFFKILHKL 658
L + + + ++L +L
Sbjct: 189 LDVTHQALATAEVLARL 205
>gi|398954251|ref|ZP_10675880.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas sp. GM33]
gi|398152711|gb|EJM41224.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas sp. GM33]
Length = 325
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 65/124 (52%), Gaps = 24/124 (19%)
Query: 79 LRQPTAQQVLINAI-SAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSD 135
L + +A LI+ + SA P IT+ ++G TN A+ L+ P + + I+ + VMGGA
Sbjct: 112 LAKGSAIAYLIDTLKSAEPHSITIAMLGPQTNLALALIQAPGIVQGIKEVVVMGGA---- 167
Query: 136 CFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTI 195
FN N + P AEFN+F+DP AA VL SG+ +T +PLD T I
Sbjct: 168 HFNGGNIT-----------------PVAEFNLFADPQAAEVVLKSGVKLTYLPLDVTHKI 210
Query: 196 PVSE 199
SE
Sbjct: 211 LTSE 214
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 101/240 (42%), Gaps = 46/240 (19%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
++ D D A D +AL++ L P EL N++ + + T GR+++P
Sbjct: 17 LIIDTDPGADDVVALLFALASPDEL-NVRALTTVAGNVRLDKTSRNARLAREWAGREEVP 75
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V G PK P + YA+ I G L G+A P++ A+ S
Sbjct: 76 VYAG--------APK-PLMRTPIYAEDIHGKEG-------LSGIAV---HEPKQGLAKGS 116
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVI 588
A+ ++S EP S ITI GP TNLA + L + ++
Sbjct: 117 ------------------AIAYLIDTLKSAEPHS-ITIAMLGPQTNLA--LALIQAPGIV 155
Query: 589 QDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
Q + V G GN+ V AEFN+F DP AA+ V +S +++ +PL + ++
Sbjct: 156 QGIKEVVVMGGAHFNGGNITPV-----AEFNLFADPQAAEVVLKSGVKLTYLPLDVTHKI 210
>gi|398842569|ref|ZP_10599747.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas sp. GM102]
gi|398105517|gb|EJL95608.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas sp. GM102]
Length = 342
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
IT+ ++G TN A+ L+ P + + I+ + +MGGA FN N +
Sbjct: 150 ITIAMLGPQTNLALALIQEPEIVQGIKEVVIMGGA----HFNGGNIT------------- 192
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSE 199
P AEFN+F+DP AA VL SG+ +T +PLD T I SE
Sbjct: 193 ----PVAEFNLFADPQAAEVVLKSGVKLTYLPLDVTHKILTSE 231
Score = 45.8 bits (107), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 101/240 (42%), Gaps = 46/240 (19%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
++ D D A D +AL++ L P EL N++ + + T GR+++P
Sbjct: 34 LIIDTDPGADDVVALLFALASPEEL-NIRALTTVAGNVRLDKTSRNARLAREWAGREEVP 92
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V G PK P + YA+ I G L T++ P++ AE +
Sbjct: 93 VYAG--------APK-PMMRTPIYAENIHGKEG--LSGVTVH--------EPKKGLAEGN 133
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVI 588
AV+ +++ +P S ITI GP TNLA + L ++
Sbjct: 134 ------------------AVNYLIDTLKTAKPHS-ITIAMLGPQTNLA--LALIQEPEIV 172
Query: 589 QDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
Q + V G GN+ V AEFN+F DP AA+ V +S +++ +PL + ++
Sbjct: 173 QGIKEVVIMGGAHFNGGNITPV-----AEFNLFADPQAAEVVLKSGVKLTYLPLDVTHKI 227
>gi|357471491|ref|XP_003606030.1| hypothetical protein MTR_4g051100, partial [Medicago truncatula]
gi|355507085|gb|AES88227.1| hypothetical protein MTR_4g051100, partial [Medicago truncatula]
Length = 162
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 32/36 (88%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQ 36
MM RDD+ VG+GGEGGIL NGTILP+VGGY PII+Q
Sbjct: 80 MMGRDDVAVGIGGEGGILSNGTILPNVGGYLPIIEQ 115
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 436 LKGILVSSTGWATSA-TVDVVYDLLHMMGRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAK 494
L+ + +S+ W ++ V+ +YDLL+MMGRDD+ VG+G + P +GG
Sbjct: 54 LEAVTISANSWTSAGHAVNQIYDLLYMMGRDDVAVGIGGEGGILSNGTILPNVGGYLPII 113
Query: 495 AIPLGSGGFLDSDTLYGLARDLPRSPRRY 523
L F+ + ++ + P +P Y
Sbjct: 114 EQVLIISSFMYTSSIKVVIYHTPTAPTFY 142
>gi|330820599|ref|YP_004349461.1| Inosine/uridine-preferring nucleoside hydrolase [Burkholderia
gladioli BSR3]
gi|327372594|gb|AEA63949.1| Inosine/uridine-preferring nucleoside hydrolase [Burkholderia
gladioli BSR3]
Length = 344
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 65/144 (45%), Gaps = 27/144 (18%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP---ITVFVMGSHTNFAIFLMN 114
V+ GL LP+ APL A Q L+ + A P +T+ +G TN A L
Sbjct: 113 VHGKTGLEGVELPEPQAPIAPLH---AVQYLVETLRAAPKQSVTICALGPLTNLATALTE 169
Query: 115 NPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAA 174
P ++ + I +MGGA F GN+ P AEFN++ DP AA
Sbjct: 170 APEIRDALREIVLMGGAF----FER------------GNI-----TPAAEFNVYVDPEAA 208
Query: 175 YTVLHSGIPVTIIPLDATKTIPVS 198
VL SG+P+ ++P D P++
Sbjct: 209 RIVLASGVPIVVLPRDVAVKAPIT 232
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 58/106 (54%), Gaps = 12/106 (11%)
Query: 540 PELRQPLA-VDVWKSIVESIE--PGSKITILTNGPLTNLAQIIG-LQNSSSVIQDVYIVG 595
PE + P+A + + +VE++ P +TI GPLTNLA + ++++ ++G
Sbjct: 125 PEPQAPIAPLHAVQYLVETLRAAPKQSVTICALGPLTNLATALTEAPEIRDALREIVLMG 184
Query: 596 GNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
G E+GN+ + AEFN+++DP AA+ V S + I ++P
Sbjct: 185 G---AFFERGNI-----TPAAEFNVYVDPEAARIVLASGVPIVVLP 222
>gi|310778866|ref|YP_003967199.1| inosine/uridine-preferring nucleoside hydrolase [Ilyobacter
polytropus DSM 2926]
gi|309748189|gb|ADO82851.1| Inosine/uridine-preferring nucleoside hydrolase [Ilyobacter
polytropus DSM 2926]
Length = 303
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 81/176 (46%), Gaps = 27/176 (15%)
Query: 74 RKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGA 131
R A ++ A + + IS P I + +G TN A+ L P +KK+I+ I VMGG+
Sbjct: 93 RSPADIKSIHAAEYMAKTISDNPGDIIIAAVGPLTNVALLLTKYPEIKKDIKEINVMGGS 152
Query: 132 IRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDA 191
+ C N++Q +AEFNI++DP AA V S +P+T++ LDA
Sbjct: 153 L---C--GGNATQ-----------------FAEFNIYADPEAAEIVFSSEVPLTMVGLDA 190
Query: 192 TKTIPVSEN--FFVEFERRQNTYEAQYCFQSLKMIRDTWSGS-PPFHEAYCMWDSF 244
T + F+ E+ + F S+ IRD+ FH++ + S
Sbjct: 191 TMKAKFQKKDLDFLREEKNSRSSMTVKIFDSMFRIRDSQGKDFVVFHDSIALIASL 246
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 64/126 (50%), Gaps = 12/126 (9%)
Query: 560 PGSKITILTNGPLTNLAQII-GLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEF 618
PG I I GPLTN+A ++ I+++ ++GG+ N ++++AEF
Sbjct: 115 PGD-IIIAAVGPLTNVALLLTKYPEIKKDIKEINVMGGSLCGGN---------ATQFAEF 164
Query: 619 NMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLM 678
N++ DP AA+ VF S++ + ++ L + K L LR+ K + S+ + ++ +
Sbjct: 165 NIYADPEAAEIVFSSEVPLTMVGLDATMKAKFQKKDLDFLREEKNSRSSM-TVKIFDSMF 223
Query: 679 TLQQSH 684
++ S
Sbjct: 224 RIRDSQ 229
>gi|333926052|ref|YP_004499631.1| ribosylpyrimidine nucleosidase [Serratia sp. AS12]
gi|333931005|ref|YP_004504583.1| ribosylpyrimidine nucleosidase [Serratia plymuthica AS9]
gi|386327875|ref|YP_006024045.1| ribosylpyrimidine nucleosidase [Serratia sp. AS13]
gi|333472612|gb|AEF44322.1| Ribosylpyrimidine nucleosidase [Serratia plymuthica AS9]
gi|333490112|gb|AEF49274.1| Ribosylpyrimidine nucleosidase [Serratia sp. AS12]
gi|333960208|gb|AEG26981.1| Ribosylpyrimidine nucleosidase [Serratia sp. AS13]
Length = 310
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 68/138 (49%), Gaps = 27/138 (19%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMN 114
+V+ G+ LP K P+ Q TA +++ + S PIT+ V G TN A+ L
Sbjct: 80 HVHGKTGMGNTHLPTPTIK--PVTQ-TAVELIAGLLRTSPQPITLVVTGPMTNIALLLAQ 136
Query: 115 NPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAA 174
+ LK NIE I MGG + + GN + P AEFNIF DP AA
Sbjct: 137 HAELKGNIERIVFMGGGMNA-----------------GN-----ATPVAEFNIFVDPEAA 174
Query: 175 YTVLHSGIPVTIIPLDAT 192
TVL SG+P+T+ L+ T
Sbjct: 175 ETVLKSGVPLTMAGLNVT 192
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 102/256 (39%), Gaps = 51/256 (19%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M +P++ D D D +AL L+ P +++K I S+ T+ LL +M R
Sbjct: 1 MPRPIIIDCDPGLDDAIALAMALRSPE--LDIKAITTSAGNQTPEKTLHNALGLLTLMKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
+DIPV A G P + ++ G G ++ LP +
Sbjct: 59 EDIPV------AAGAAAPLMRALVIAEHVH----GKTGMGNTH--------LPTPTIKPV 100
Query: 525 AENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS 584
+ +V A P QP IT++ GP+TN+A ++
Sbjct: 101 TQTAVELIAGLLRTSP---QP------------------ITLVVTGPMTNIALLLAQHAE 139
Query: 585 -SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLH 643
I+ + +GG N ++ AEFN+F+DP AA+ V +S + + + L+
Sbjct: 140 LKGNIERIVFMGGGMNAGN---------ATPVAEFNIFVDPEAAETVLKSGVPLTMAGLN 190
Query: 644 MQRRVASFFKILHKLR 659
+ + + + ++R
Sbjct: 191 VTHQALVLPQDIERIR 206
>gi|392956174|ref|ZP_10321703.1| nucleosidase [Bacillus macauensis ZFHKF-1]
gi|391877804|gb|EIT86395.1| nucleosidase [Bacillus macauensis ZFHKF-1]
Length = 309
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 81/204 (39%), Gaps = 35/204 (17%)
Query: 88 LINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQS 145
+I+ + A P +T+ + + TN A+ L P L K I+ I +MGGA+
Sbjct: 109 IISMVKAFPNEVTLITVATQTNVALALEKEPSLVKEIDRIVMMGGAVT------------ 156
Query: 146 EQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEF 205
P + PYAE N F D +A+ VL SG+PVT+I LD T + + +
Sbjct: 157 ---------VPGNVTPYAEANFFGDADSAHYVLQSGVPVTLIGLDVTMQTLLKRDELQVW 207
Query: 206 ERRQNTYEAQYCFQSLKMIRDTWSGSPPFHEAYCMWDSFMAGVALSIMLNSSSHNGENAC 265
E T Q Q D + P + D GVA+ + +
Sbjct: 208 E-HSGTKAGQLFAQMCHFYMDFYEKENPQLGGCALHDPLAVGVAI-----------DQSF 255
Query: 266 SEMEYMNLTVVTSNEPYGISDGSN 289
+ E MN+ V E G S G
Sbjct: 256 VQTEKMNVIVEREGERRGQSVGEQ 279
>gi|423692507|ref|ZP_17667027.1| pyrimidine-specific ribonucleoside hydrolase RihA [Pseudomonas
fluorescens SS101]
gi|388000233|gb|EIK61562.1| pyrimidine-specific ribonucleoside hydrolase RihA [Pseudomonas
fluorescens SS101]
Length = 342
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 24/124 (19%)
Query: 79 LRQPTAQQVLINAISAG---PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSD 135
L + A LI +S+ IT+ ++G TN A+ L P + + I+ + VMGGA
Sbjct: 129 LAEGNAVDYLIKTLSSAKPHSITIAMLGPQTNLALALTQAPEITQGIKEVVVMGGA---- 184
Query: 136 CFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTI 195
FN N + P AEFN+F+DP AA VL SG+ +T +PLD T +
Sbjct: 185 HFNGGNIT-----------------PVAEFNLFADPVAAEIVLKSGVKLTYLPLDVTHKV 227
Query: 196 PVSE 199
S+
Sbjct: 228 LTSD 231
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 61/127 (48%), Gaps = 8/127 (6%)
Query: 547 AVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGN 606
AVD + S +P S ITI GP TNLA + L + + Q + V G GN
Sbjct: 134 AVDYLIKTLSSAKPHS-ITIAMLGPQTNLA--LALTQAPEITQGIKEVVVMGGAHFNGGN 190
Query: 607 VFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPE 666
+ V AEFN+F DP+AA+ V +S +++ +PL + +V + L K+ D
Sbjct: 191 ITPV-----AEFNLFADPVAAEIVLKSGVKLTYLPLDVTHKVLTSDARLKKIADLNNNAS 245
Query: 667 SVFSQRL 673
V S L
Sbjct: 246 KVVSSIL 252
>gi|399004574|ref|ZP_10707187.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas sp. GM17]
gi|425898657|ref|ZP_18875248.1| pyrimidine-specific ribonucleoside hydrolase RihA [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
gi|397892378|gb|EJL08856.1| pyrimidine-specific ribonucleoside hydrolase RihA [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
gi|398129419|gb|EJM18787.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas sp. GM17]
Length = 342
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 63/124 (50%), Gaps = 24/124 (19%)
Query: 79 LRQPTAQQVLINAISAG---PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSD 135
L + +A LI+ + A IT+ ++G TN A+ L+ P + + I+ + VMGGA
Sbjct: 129 LAEGSAINYLIDTLRAAKPHSITIAMLGPQTNLALALIQAPDITQGIKEVVVMGGA---- 184
Query: 136 CFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTI 195
FN N + P AEFN+F+DP AA VL SG+ +T +PLD T +
Sbjct: 185 HFNGGNIT-----------------PVAEFNLFADPQAAEVVLKSGVKLTYLPLDVTHKV 227
Query: 196 PVSE 199
S+
Sbjct: 228 LTSD 231
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 107/251 (42%), Gaps = 48/251 (19%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
++ D D A D +AL++ L P EL ++ + + T GR+++P
Sbjct: 34 LIIDTDPGADDVVALLFALASPEEL-QIRALTTVAGNVRLDKTSRNARLAREWAGREEVP 92
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V G PK P + YA+ I G + T++ P++ AE S
Sbjct: 93 VYAG--------APK-PLLRTPIYAENIHGKEG--ISGVTVH--------EPKKGLAEGS 133
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLA-QIIGLQNSSSV 587
A++ + + +P S ITI GP TNLA +I + +
Sbjct: 134 ------------------AINYLIDTLRAAKPHS-ITIAMLGPQTNLALALIQAPDITQG 174
Query: 588 IQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
I++V ++GG GN+ V AEFN+F DP AA+ V +S +++ +PL + +
Sbjct: 175 IKEVVVMGGAHFNG---GNITPV-----AEFNLFADPQAAEVVLKSGVKLTYLPLDVTHK 226
Query: 648 VASFFKILHKL 658
V + L K+
Sbjct: 227 VLTSDARLQKI 237
>gi|389685134|ref|ZP_10176458.1| pyrimidine-specific ribonucleoside hydrolase RihA [Pseudomonas
chlororaphis O6]
gi|388550787|gb|EIM14056.1| pyrimidine-specific ribonucleoside hydrolase RihA [Pseudomonas
chlororaphis O6]
Length = 342
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 63/124 (50%), Gaps = 24/124 (19%)
Query: 79 LRQPTAQQVLINAISAG---PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSD 135
L + +A LI+ + A IT+ ++G TN A+ L+ P + + I+ + VMGGA
Sbjct: 129 LAEGSAINYLIDTLRAAKPHSITIAMLGPQTNLALALIQAPDITQGIKEVVVMGGA---- 184
Query: 136 CFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTI 195
FN N + P AEFN+F+DP AA VL SG+ +T +PLD T +
Sbjct: 185 HFNGGNIT-----------------PVAEFNLFADPQAAEVVLKSGVKLTYLPLDVTHKV 227
Query: 196 PVSE 199
S+
Sbjct: 228 LTSD 231
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 107/251 (42%), Gaps = 48/251 (19%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
++ D D A D +AL++ L P EL ++ + + T GR+++P
Sbjct: 34 LIIDTDPGADDVVALLFALASPEEL-QIRALTTVAGNVRLDKTSRNARLAREWAGREEVP 92
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V G PK P + YA+ I G + T++ P++ AE S
Sbjct: 93 VYAG--------APK-PLLRTPIYAENIHGKEG--ISGVTVH--------EPKKGLAEGS 133
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLA-QIIGLQNSSSV 587
A++ + + +P S ITI GP TNLA +I + +
Sbjct: 134 ------------------AINYLIDTLRAAKPHS-ITIAMLGPQTNLALALIQAPDITQG 174
Query: 588 IQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
I++V ++GG GN+ V AEFN+F DP AA+ V +S +++ +PL + +
Sbjct: 175 IKEVVVMGGAHFNG---GNITPV-----AEFNLFADPQAAEVVLKSGVKLTYLPLDVTHK 226
Query: 648 VASFFKILHKL 658
V + L K+
Sbjct: 227 VLTSDARLQKI 237
>gi|449467936|ref|XP_004151678.1| PREDICTED: pyrimidine-specific ribonucleoside hydrolase RihA-like
[Cucumis sativus]
Length = 328
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 83/190 (43%), Gaps = 35/190 (18%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ G +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 85 VHGESGLDGPALPEPG--FAP-QNCTAVELMAKVLRESAEPVTLVATGPQTNVALLLNSH 141
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L NI I +MGGA+ +GN P AEFNIF DP AA
Sbjct: 142 PELHSNIARIVIMGGAM-----------------GLGNW-----TPAAEFNIFVDPEAAE 179
Query: 176 TVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPFH 235
V SG+P+ + L +P+ T+ AQ Q ++ R G+P
Sbjct: 180 IVFQSGLPIVMEGLGVQAGLPIV------MAGLDVTHRAQIMAQDIERFRTV--GNPVAT 231
Query: 236 EAYCMWDSFM 245
+ D FM
Sbjct: 232 TVAELLDFFM 241
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 103/250 (41%), Gaps = 67/250 (26%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M +P++ D D D +AL+ L P +++K + S+ T+ V +L ++ R
Sbjct: 5 MAQPIILDCDPGHDDAIALVLALASPE--LDVKAVTSSAGNQTPDKTLRNVLRMLTLLKR 62
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIP+ A G + P L R+L
Sbjct: 63 TDIPI------AGGAIKP-----------------------------LMREL------II 81
Query: 525 AENSVRFGASQDNDDPELRQP-------LAVDVWKSIV-ESIEPGSKITILTNGPLTNLA 576
A+N D P L +P AV++ ++ ES EP +T++ GP TN+A
Sbjct: 82 ADN---VHGESGLDGPALPEPGFAPQNCTAVELMAKVLRESAEP---VTLVATGPQTNVA 135
Query: 577 QIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ S I + I+GG G N + AEFN+F+DP AA+ VF+S L
Sbjct: 136 LLLNSHPELHSNIARIVIMGGAMGLGN---------WTPAAEFNIFVDPEAAEIVFQSGL 186
Query: 636 EIKLIPLHMQ 645
I + L +Q
Sbjct: 187 PIVMEGLGVQ 196
>gi|269104360|ref|ZP_06157056.1| inosine-uridine preferring nucleoside hydrolase [Photobacterium
damselae subsp. damselae CIP 102761]
gi|268161000|gb|EEZ39497.1| inosine-uridine preferring nucleoside hydrolase [Photobacterium
damselae subsp. damselae CIP 102761]
Length = 312
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 79/194 (40%), Gaps = 58/194 (29%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQRLYVNT 60
++NR DI V G + + + I PDV G
Sbjct: 55 LLNRTDIEVAGGAKKPLSRDLIIAPDVHG------------------------------- 83
Query: 61 NYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHL 118
GL LP K + L TA +++ + S+ PIT+ G TN AIFL PHL
Sbjct: 84 ESGLDGPELPDTKCKASSL---TAFELIAKTLQESSEPITLVPTGPLTNIAIFLSAYPHL 140
Query: 119 KKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVL 178
+ I+ I +MGGA +GN +P AEFNIF DP AA V
Sbjct: 141 HRKIKQIVLMGGAA-----------------GVGNW-----SPAAEFNIFVDPEAADIVF 178
Query: 179 HSGIPVTIIPLDAT 192
SGIP+ + LD T
Sbjct: 179 KSGIPIVMCGLDVT 192
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 103/256 (40%), Gaps = 51/256 (19%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +ALI L L +++K + S+ T++ +L ++ R
Sbjct: 1 MLLPIICDCDPGHDDAIALI--LALSRHELDVKAVTTSAGNQTPDKTLNNALRILTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DI V GG K PL + D D P P
Sbjct: 59 TDIEVA-----------------GGAKK----PLSRDLIIAPDVHGESGLDGPELPDTKC 97
Query: 525 AENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQII-GLQN 583
+S+ EL + K++ ES EP IT++ GPLTN+A + +
Sbjct: 98 KASSLTAF--------EL-------IAKTLQESSEP---ITLVPTGPLTNIAIFLSAYPH 139
Query: 584 SSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLH 643
I+ + ++GG G N S AEFN+F+DP AA VF+S + I + L
Sbjct: 140 LHRKIKQIVLMGGAAGVGN---------WSPAAEFNIFVDPEAADIVFKSGIPIVMCGLD 190
Query: 644 MQRRVASFFKILHKLR 659
+ + + + ++R
Sbjct: 191 VTHQAQIMDQDIERIR 206
>gi|395499424|ref|ZP_10431003.1| putative inosine-uridine preferring nucleoside hydrolase
[Pseudomonas sp. PAMC 25886]
Length = 342
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 60/124 (48%), Gaps = 24/124 (19%)
Query: 79 LRQPTAQQVLINAISAG---PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSD 135
L + A LI +S IT+ ++G TN A+ L P + + I+ + VMGGA
Sbjct: 129 LAEGNAVDYLIKTLSTAKPHSITIAMLGPQTNLALALTQAPEITQGIKEVVVMGGA---- 184
Query: 136 CFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTI 195
FN N + P AEFN+F+DP AA VL SG+ +T +PLD T +
Sbjct: 185 HFNGGNIT-----------------PVAEFNLFADPIAAEIVLKSGVKLTYLPLDVTHKV 227
Query: 196 PVSE 199
S+
Sbjct: 228 LTSD 231
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 8/102 (7%)
Query: 547 AVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGN 606
AVD + + +P S ITI GP TNLA + L + + Q + V G GN
Sbjct: 134 AVDYLIKTLSTAKPHS-ITIAMLGPQTNLA--LALTQAPEITQGIKEVVVMGGAHFNGGN 190
Query: 607 VFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
+ V AEFN+F DP+AA+ V +S +++ +PL + +V
Sbjct: 191 ITPV-----AEFNLFADPIAAEIVLKSGVKLTYLPLDVTHKV 227
>gi|395799282|ref|ZP_10478563.1| putative inosine-uridine preferring nucleoside hydrolase
[Pseudomonas sp. Ag1]
gi|421144105|ref|ZP_15604026.1| threonyl-tRNA synthetase [Pseudomonas fluorescens BBc6R8]
gi|395336386|gb|EJF68246.1| putative inosine-uridine preferring nucleoside hydrolase
[Pseudomonas sp. Ag1]
gi|404504697|gb|EKA18746.1| threonyl-tRNA synthetase [Pseudomonas fluorescens BBc6R8]
Length = 342
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 60/124 (48%), Gaps = 24/124 (19%)
Query: 79 LRQPTAQQVLINAISAG---PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSD 135
L + A LI +S IT+ ++G TN A+ L P + + I+ + VMGGA
Sbjct: 129 LAEGNAVDYLIKTLSTAKPHSITIAMLGPQTNLALALTQAPEITQGIKEVVVMGGA---- 184
Query: 136 CFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTI 195
FN N + P AEFN+F+DP AA VL SG+ +T +PLD T +
Sbjct: 185 HFNGGNIT-----------------PVAEFNLFADPIAAEIVLKSGVKLTYLPLDVTHKV 227
Query: 196 PVSE 199
S+
Sbjct: 228 LTSD 231
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 100/240 (41%), Gaps = 46/240 (19%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
++ D D A D +AL++ + P EL ++ + + T GR+DIP
Sbjct: 34 LIIDTDPGADDVVALLFAMASPDEL-QIRALTTVAGNVRLDKTSRNARLAREWAGREDIP 92
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V G PK P + YA+ I G + T++ P++ AE +
Sbjct: 93 VYAG--------APK-PMLRTPIYAENIHGKEG--ISGVTVH--------EPKKGLAEGN 133
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVI 588
AVD + + +P S ITI GP TNLA + L + +
Sbjct: 134 ------------------AVDYLIKTLSTAKPHS-ITIAMLGPQTNLA--LALTQAPEIT 172
Query: 589 QDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
Q + V G GN+ V AEFN+F DP+AA+ V +S +++ +PL + +V
Sbjct: 173 QGIKEVVVMGGAHFNGGNITPV-----AEFNLFADPIAAEIVLKSGVKLTYLPLDVTHKV 227
>gi|422607376|ref|ZP_16679376.1| inosine-uridine preferring nucleoside hydrolase [Pseudomonas
syringae pv. mori str. 301020]
gi|330891018|gb|EGH23679.1| inosine-uridine preferring nucleoside hydrolase [Pseudomonas
syringae pv. mori str. 301020]
Length = 332
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 137/323 (42%), Gaps = 74/323 (22%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLL---HM 461
M + V+ D DM D L++ YL+K P I++ GI V+ G D+ + ++ H+
Sbjct: 1 MNRKVIIDTDMGWDDVLSIAYLMKRPD--IDIVGITVTGCG-----ETDLGWGVIIAQHL 53
Query: 462 MGRDDIPVGLGDVFAVGEVNP-----KFP-PIGGCKYAKAIPLGSGGFLDSDTLYGLARD 515
+G I L V A G P +FP P K +G G L+ L L+ +
Sbjct: 54 LG---IGNRLSTVVAKGTDKPLEYDNRFPQPF---KNDMNDIMGLLGTLNPAALPALS-N 106
Query: 516 LPRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNL 575
LP Y A N+ SQD KIT+L+ G TN+
Sbjct: 107 LPAWEFMYQAVNN-----SQD--------------------------KITVLSLGGFTNI 135
Query: 576 AQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTV-------------PSSKYAEFNMFL 622
A+++ L N + Q + + G GNV + S+ YAE+N+F+
Sbjct: 136 AKMLSLSNQPADFQMIEQIVAMAGAVYVDGNVAALNDAQKEWNQGEAYSSNHYAEWNVFV 195
Query: 623 DPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQ 682
DP+AA AVF+S L + L+PL + +V IL +K T + + Q L T
Sbjct: 196 DPVAADAVFQSSLPLTLVPLDVCNQV-----ILDASYSQKITASDPVALLVKQVLETKSG 250
Query: 683 SHHSYHHVDTFLGEVLGAVILGG 705
+H + V F + L +++ G
Sbjct: 251 THAEGYPVPIF--DPLATMLMAG 271
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 58/112 (51%), Gaps = 7/112 (6%)
Query: 93 SAGPITVFVMGSHTNFA--IFLMNNPHLKKNIEHIYVMGGAIRSDC-FNSTNSSQSEQCD 149
S ITV +G TN A + L N P + IE I M GA+ D + N +Q E
Sbjct: 120 SQDKITVLSLGGFTNIAKMLSLSNQPADFQMIEQIVAMAGAVYVDGNVAALNDAQKEW-- 177
Query: 150 SIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENF 201
+ G Y SN YAE+N+F DP AA V S +P+T++PLD + + ++
Sbjct: 178 NQGEAY--SSNHYAEWNVFVDPVAADAVFQSSLPLTLVPLDVCNQVILDASY 227
>gi|388467325|ref|ZP_10141535.1| pyrimidine-specific ribonucleoside hydrolase RihA [Pseudomonas
synxantha BG33R]
gi|388010905|gb|EIK72092.1| pyrimidine-specific ribonucleoside hydrolase RihA [Pseudomonas
synxantha BG33R]
Length = 342
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 60/124 (48%), Gaps = 24/124 (19%)
Query: 79 LRQPTAQQVLINAISAG---PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSD 135
L + A LI +S IT+ ++G TN A+ L P + + I+ + VMGGA
Sbjct: 129 LAEGNAVDYLIKTLSTAKPHSITIAMLGPQTNLALALTQAPEITQGIKEVVVMGGA---- 184
Query: 136 CFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTI 195
FN N + P AEFN+F+DP AA VL SG+ +T +PLD T +
Sbjct: 185 HFNGGNIT-----------------PVAEFNLFADPVAAEIVLKSGVKLTYLPLDVTHKV 227
Query: 196 PVSE 199
S+
Sbjct: 228 LTSD 231
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 61/127 (48%), Gaps = 8/127 (6%)
Query: 547 AVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGN 606
AVD + + +P S ITI GP TNLA + L + + Q + V G GN
Sbjct: 134 AVDYLIKTLSTAKPHS-ITIAMLGPQTNLA--LALTQAPEITQGIKEVVVMGGAHFNGGN 190
Query: 607 VFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPE 666
+ V AEFN+F DP+AA+ V +S +++ +PL + +V + L K+ D
Sbjct: 191 ITPV-----AEFNLFADPVAAEIVLKSGVKLTYLPLDVTHKVLTSDARLKKIADLNNNAS 245
Query: 667 SVFSQRL 673
V S L
Sbjct: 246 KVVSSIL 252
>gi|392978111|ref|YP_006476699.1| ribonucleoside hydrolase 1 [Enterobacter cloacae subsp. dissolvens
SDM]
gi|392324044|gb|AFM58997.1| ribonucleoside hydrolase 1 [Enterobacter cloacae subsp. dissolvens
SDM]
Length = 313
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 70/155 (45%), Gaps = 27/155 (17%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ G +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPEPG--FAP-QSCTAVELMAKVLRESAEPVTLVATGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNIF DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIFVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQN 210
V SG+P+ + LD T + N F N
Sbjct: 176 IVFQSGLPIVMAGLDVTHRAQIMANDIERFRAIGN 210
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 106/258 (41%), Gaps = 55/258 (21%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M +P++ D D D +AL+ L P + +K + S+ T+ V +L ++ R
Sbjct: 1 MAQPIILDCDPGHDDAIALVLALASPE--LKVKAVTSSAGNQTPDKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAVKPLMREL----------------IIADNVHGESGLDGPALPEPG 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIV-ESIEPGSKITILTNGPLTNLAQIIGLQ 582
A S AV++ ++ ES EP +T++ GP TN+A ++
Sbjct: 97 FAPQSCT----------------AVELMAKVLRESAEP---VTLVATGPQTNVALLLNSH 137
Query: 583 NS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
S I + I+GG G N + AEFN+F+DP AA+ VF+S L I +
Sbjct: 138 PELHSKIARIVIMGGAMGLGN---------WTPAAEFNIFVDPEAAEIVFQSGLPIVMAG 188
Query: 642 LHMQRRVASFFKILHKLR 659
L + R + + R
Sbjct: 189 LDVTHRAQIMANDIERFR 206
>gi|89069159|ref|ZP_01156532.1| inosine-uridine preferring nucleoside hydrolase [Oceanicola
granulosus HTCC2516]
gi|89045332|gb|EAR51398.1| inosine-uridine preferring nucleoside hydrolase [Oceanicola
granulosus HTCC2516]
Length = 313
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 80/174 (45%), Gaps = 29/174 (16%)
Query: 94 AGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGN 153
AG +T+ +G TN A L P + + ++ I +MGGA +GN
Sbjct: 118 AGSVTLCPLGPLTNIAAALQRAPEIAERVQEIVLMGGAYFE----------------VGN 161
Query: 154 LYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT----KTIPVSENFFVEFERRQ 209
+ P AEFNI+ DP AA V HSGIP+T++PLD T T P + F +
Sbjct: 162 I-----TPAAEFNIYVDPEAADIVFHSGIPLTVVPLDTTHKALTTKPRIDAFRAMGTKVG 216
Query: 210 NTYEAQY-CFQSLKMIRDTWSGSP---PFHEAYCMWDSFMAGVALSIMLNSSSH 259
++ A F+ M + G+P P A+ + + M G +++ + +SS
Sbjct: 217 DSVAAWTDFFERFDMEKYGAEGAPLHDPCVIAHLIDPTLMTGRHVNVEIETSSE 270
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 102/244 (41%), Gaps = 58/244 (23%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M + ++ D D D +A++ L P E ++L GI + T + + GR
Sbjct: 1 MARKIIIDTDPGQDDAVAILLALASP-EDVDLLGITAVAGNVPLPLTERNARIVCELAGR 59
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDT-LYGLARDLPRSPRRY 523
D+ VFA GC PL + + T L G D P P +
Sbjct: 60 PDV-----KVFA------------GCDAPLERPLVTAEHVHGKTGLDGPPMDEPTMPLQ- 101
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESI--EPGSKITILTNGPLTNLAQIIGL 581
A+++V F I E++ EP +T+ GPLTN+A L
Sbjct: 102 -AQHAVDF----------------------ITETLRREPAGSVTLCPLGPLTNIAA--AL 136
Query: 582 QNSSSV---IQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIK 638
Q + + +Q++ ++GG E GN+ + AEFN+++DP AA VF S + +
Sbjct: 137 QRAPEIAERVQEIVLMGGAY---FEVGNI-----TPAAEFNIYVDPEAADIVFHSGIPLT 188
Query: 639 LIPL 642
++PL
Sbjct: 189 VVPL 192
>gi|339634741|ref|YP_004726382.1| ribonucleoside hydrolase RihC [Weissella koreensis KACC 15510]
gi|338854537|gb|AEJ23703.1| ribonucleoside hydrolase RihC [Weissella koreensis KACC 15510]
Length = 315
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 70/139 (50%), Gaps = 29/139 (20%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQ---QVLINAISAGPITVFVMGSHTNFAIFLM 113
Y++ G+ P+ K+ P+ P + QVL +A A PIT+ GS+TN A+ L+
Sbjct: 83 YIHGESGMPGYDFPE--LKHQPIDDPAVEAMHQVLSDA--AEPITIVATGSYTNVALLLI 138
Query: 114 NNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFA 173
P +K I+ +MGG++ S GN+ + AEFNIF+DP A
Sbjct: 139 KYPDIKSKIKRFILMGGSL-----------------SGGNV-----SSVAEFNIFTDPDA 176
Query: 174 AYTVLHSGIPVTIIPLDAT 192
A V SGI +T+I LD T
Sbjct: 177 AKIVYESGIAITMIGLDVT 195
Score = 46.6 bits (109), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 82/167 (49%), Gaps = 28/167 (16%)
Query: 538 DDPELR-QPL---AVDVWKSIV-ESIEPGSKITILTNGPLTNLAQI-IGLQNSSSVIQDV 591
D PEL+ QP+ AV+ ++ ++ EP ITI+ G TN+A + I + S I+
Sbjct: 94 DFPELKHQPIDDPAVEAMHQVLSDAAEP---ITIVATGSYTNVALLLIKYPDIKSKIKRF 150
Query: 592 YIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASF 651
++GG+ GNV S AEFN+F DP AAK V+ES + I +I L +
Sbjct: 151 ILMGGSLS----GGNV-----SSVAEFNIFTDPDAAKIVYESGIAITMIGLDVT------ 195
Query: 652 FKILHKLRDRKKTPESVFSQRLLQGLMT----LQQSHHSYHHVDTFL 694
K L + + E +++ G+MT ++ + H V+T L
Sbjct: 196 LKALLSNQSIENVAEIGEVGKMISGVMTAYNDIEAAGKPMHDVNTIL 242
>gi|417861505|ref|ZP_12506560.1| uridine-preferring nucleoside hydrolase [Agrobacterium tumefaciens
F2]
gi|338821909|gb|EGP55878.1| uridine-preferring nucleoside hydrolase [Agrobacterium tumefaciens
F2]
Length = 326
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 23/113 (20%)
Query: 91 AISAGP-ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCD 149
A+ AG IT+ +G TN A+ L+ +P + + I I MGGA
Sbjct: 115 AVDAGEQITICAIGPMTNIALALVQHPDVARGIGRIVAMGGAF----------------T 158
Query: 150 SIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT-KTIPVSENF 201
++G+ P+AEFNI++DP AA VL SG+P+ ++PLD T K + +E+F
Sbjct: 159 ALGH-----RTPWAEFNIYADPHAAEIVLQSGVPIVLMPLDMTFKALFTAEHF 206
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 13/114 (11%)
Query: 550 VWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFT 609
+ ++ +++ G +ITI GP+TN+A + L V + + G+ G FT
Sbjct: 108 IVRTARAAVDAGEQITICAIGPMTNIA--LALVQHPDVARGI-------GRIVAMGGAFT 158
Query: 610 VPSSK--YAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDR 661
+ +AEFN++ DP AA+ V +S + I L+PL M + + F H R R
Sbjct: 159 ALGHRTPWAEFNIYADPHAAEIVLQSGVPIVLMPLDMTFK--ALFTAEHFERFR 210
>gi|226311100|ref|YP_002770994.1| nucleosidase [Brevibacillus brevis NBRC 100599]
gi|226094048|dbj|BAH42490.1| putative nucleosidase [Brevibacillus brevis NBRC 100599]
Length = 310
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 28/177 (15%)
Query: 55 RLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNFAIFL 112
RL+ N GL LP K P +A Q LI+ I P +T+ +GS N A +
Sbjct: 79 RLFHGEN-GLGNVVLPDPSTKAQP---QSAAQFLISTIKENPHEVTLVTVGSMANLARAI 134
Query: 113 MNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPF 172
M P + ++ + VMGGA+ P + P AE NI +DP
Sbjct: 135 MAAPEIVSLVKRVVVMGGAVT---------------------VPGNRTPVAEANICADPE 173
Query: 173 AAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWS 229
AA + SGIPVT++ LD T ++ E+ R ++T + + ++ D ++
Sbjct: 174 AAAYIFQSGIPVTLVGLDVTMQTLLTREHLQEW-RAKDTRLSHFFADMCEVYMDAYA 229
>gi|398852853|ref|ZP_10609494.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas sp. GM80]
gi|398242830|gb|EJN28435.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas sp. GM80]
Length = 342
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
IT+ ++G TN A+ L+ P + + I+ + VMGGA FN N +
Sbjct: 150 ITIAMLGPQTNLALALIQEPEIVQGIKEVVVMGGA----HFNGGNIT------------- 192
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSE 199
P AEFN+F+DP AA VL SG+ +T +PLD T I S+
Sbjct: 193 ----PVAEFNLFADPQAAEVVLKSGVKLTYLPLDVTHKILTSD 231
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 101/240 (42%), Gaps = 46/240 (19%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
++ D D A D +AL++ L P EL N++ + + T GR+D+P
Sbjct: 34 LIIDTDPGADDVVALLFALASPDEL-NIRALTTVAGNVRLDKTSRNARLAREWAGREDVP 92
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V G PK P + YA+ I G L G+A P++ AE +
Sbjct: 93 VYAG--------APK-PLMRTPIYAENIHGKEG-------LSGVAV---HEPKKGLAEGN 133
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVI 588
AV+ +++ +P S ITI GP TNLA + L ++
Sbjct: 134 ------------------AVNYLIDTLKTAKPHS-ITIAMLGPQTNLA--LALIQEPEIV 172
Query: 589 QDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
Q + V G GN+ V AEFN+F DP AA+ V +S +++ +PL + ++
Sbjct: 173 QGIKEVVVMGGAHFNGGNITPV-----AEFNLFADPQAAEVVLKSGVKLTYLPLDVTHKI 227
>gi|88707015|ref|ZP_01104712.1| Purine nucleoside permease [Congregibacter litoralis KT71]
gi|88698743|gb|EAQ95865.1| Purine nucleoside permease [Congregibacter litoralis KT71]
Length = 720
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 104/246 (42%), Gaps = 50/246 (20%)
Query: 79 LRQPTAQQVL-----INAISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIR 133
LR+P + + ++A + P+TV G TN A +L P E + +MGGA+
Sbjct: 469 LREPDGRHAVELLHDVHAAADKPVTVLATGPLTNIAQWLERYPEDPAKTERLVIMGGAL- 527
Query: 134 SDCFNSTNSSQSEQCDSIGNL----YPDDS-NPYAEFNIFSDPFAAYTVLHSGIPVTIIP 188
D+ GN+ + DD+ N AE+NI+ D AA VL S + + ++
Sbjct: 528 ---------------DAPGNIIVPGFTDDNPNTRAEWNIYVDALAADKVLRSDLAMELVG 572
Query: 189 LDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTW---SGSPPFHEAYCMWDSFM 245
LD T + V+ F F+ R + A F + +TW SG Y WD
Sbjct: 573 LDVTNHVKVTPAFAAAFKTRVDNPAA--AFWDAVLDANTWFIDSGE------YYFWDVL- 623
Query: 246 AGVALSIMLNSSSHNGENACS-EMEYMNLTVVTSNEP-YGISDGSNPLIDGLEVPK--FN 301
AL+++ + E C EM + T + EP + SD S P + P+ F
Sbjct: 624 --AALAVI------DRERFCDGEMLALGATYEETEEPWWATSDKSMPDSNWQGAPRRHFA 675
Query: 302 VQKNGV 307
+ GV
Sbjct: 676 AETAGV 681
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 122/278 (43%), Gaps = 53/278 (19%)
Query: 408 PVVFDIDMSAGDFLALIYLLKLP-VELINLKGILVSSTGWA--TSATVDVVYDLLHMMGR 464
PVVFD DM+ D+ AL++L + P VEL+ + V+++G A T + + L +
Sbjct: 374 PVVFDTDMAIDDWAALLFLARHPGVELL---AVTVAASGEAHCEPGTRNALALLDLVNPH 430
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
+ IPV GD + P+ G + +P D DTL G+ P +P
Sbjct: 431 NAIPVSCGDAY----------PLDGY-FVFPVPWQK----DMDTLSGV----PITP---- 467
Query: 525 AENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS 584
S+R +P+ R AV++ + + + +T+L GPLTN+AQ +
Sbjct: 468 ---SLR--------EPDGRH--AVELLHDVHAAAD--KPVTVLATGPLTNIAQWLERYPE 512
Query: 585 SSVIQDVYIVGGNKGQDNEKGNVFTVPS------SKYAEFNMFLDPLAAKAVFESKLEIK 638
+ ++ G G + GN+ VP + AE+N+++D LAA V S L ++
Sbjct: 513 DPAKTERLVIMG--GALDAPGNII-VPGFTDDNPNTRAEWNIYVDALAADKVLRSDLAME 569
Query: 639 LIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQG 676
L+ L + V + R P + F +L
Sbjct: 570 LVGLDVTNHVKVTPAFAAAFKTRVDNPAAAFWDAVLDA 607
>gi|410090980|ref|ZP_11287559.1| inosine-uridine preferring nucleoside hydrolase [Pseudomonas
viridiflava UASWS0038]
gi|409761701|gb|EKN46755.1| inosine-uridine preferring nucleoside hydrolase [Pseudomonas
viridiflava UASWS0038]
Length = 324
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 151/339 (44%), Gaps = 43/339 (12%)
Query: 445 GWATSATVDVVYDLLHMMGRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFL 504
GW D V + ++M R DI + V GE + + G A+ + LG G L
Sbjct: 2 GW------DDVLSIAYLMKRPDIDIVGITVTGCGETDLGW----GVIIARHL-LGIGNRL 50
Query: 505 DSDTLYGLARDLP-----RSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIE 559
D T+ D P R P+ + + + G + +L W + E+I+
Sbjct: 51 D--TVVARGTDTPLEHDYRFPQDFKNDMNDVMGLLGTLNPAQLPALSDTPAWTFLFETIK 108
Query: 560 PGS-KITILTNGPLTNLAQIIGLQNSSSVIQD----------VYIVGGNKGQDN-----E 603
+ IT+L+ G TN+A+++ L S + VY+ G G +N +
Sbjct: 109 NSTVPITLLSLGGFTNIAKMLSLSTHPSDFANLDSIYAMAGAVYVDGNVAGLNNAQPAWD 168
Query: 604 KGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKK 663
+G ++ S+ YAE+N+F+D +AA +VF S L + L+PL +V + R
Sbjct: 169 QGPAYS--SNYYAEWNVFVDAVAANSVFGSTLPLTLVPLDACNQV--ILDPTYSTRITAT 224
Query: 664 TPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGGNPHLNQT-YKIKSLEIIS 722
P + +++L+ ++ H+ ++ + + L +++ G +T + ++ IS
Sbjct: 225 DPVATLVRKVLE----VKSGTHAEGNLPVPIFDPLATLLMAGGISATKTNAEYLAVNTIS 280
Query: 723 DGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEVL 761
+ GQ++V ++ + V + ++ + ++FA+V+
Sbjct: 281 SEHDNHCGQVVVKKDGSRPVSFVTGVSQTAFANNFAQVI 319
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Query: 93 SAGPITVFVMGSHTNFA--IFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDS 150
S PIT+ +G TN A + L +P N++ IY M GA+ D N + ++
Sbjct: 110 STVPITLLSLGGFTNIAKMLSLSTHPSDFANLDSIYAMAGAVYVDG-NVAGLNNAQPAWD 168
Query: 151 IGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTI 195
G Y SN YAE+N+F D AA +V S +P+T++PLDA +
Sbjct: 169 QGPAY--SSNYYAEWNVFVDAVAANSVFGSTLPLTLVPLDACNQV 211
>gi|420160727|ref|ZP_14667499.1| Nonspecific ribonucleoside hydrolase [Weissella koreensis KCTC
3621]
gi|394746019|gb|EJF34824.1| Nonspecific ribonucleoside hydrolase [Weissella koreensis KCTC
3621]
Length = 315
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 70/139 (50%), Gaps = 29/139 (20%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQ---QVLINAISAGPITVFVMGSHTNFAIFLM 113
Y++ G+ P+ K+ P+ P + QVL +A A PIT+ GS+TN A+ L+
Sbjct: 83 YIHGESGMPGYDFPE--LKHQPIDDPAVEAMHQVLSDA--AEPITIVATGSYTNVALLLI 138
Query: 114 NNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFA 173
P +K I+ +MGG++ S GN+ + AEFNIF+DP A
Sbjct: 139 KYPDIKSKIKRFILMGGSL-----------------SGGNV-----SSVAEFNIFTDPDA 176
Query: 174 AYTVLHSGIPVTIIPLDAT 192
A V SGI +T+I LD T
Sbjct: 177 AKIVYESGIDITMIGLDVT 195
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 28/167 (16%)
Query: 538 DDPELR-QPL---AVDVWKSIV-ESIEPGSKITILTNGPLTNLAQI-IGLQNSSSVIQDV 591
D PEL+ QP+ AV+ ++ ++ EP ITI+ G TN+A + I + S I+
Sbjct: 94 DFPELKHQPIDDPAVEAMHQVLSDAAEP---ITIVATGSYTNVALLLIKYPDIKSKIKRF 150
Query: 592 YIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASF 651
++GG+ GNV S AEFN+F DP AAK V+ES ++I +I L +
Sbjct: 151 ILMGGSLS----GGNV-----SSVAEFNIFTDPDAAKIVYESGIDITMIGLDVT------ 195
Query: 652 FKILHKLRDRKKTPESVFSQRLLQGLMT----LQQSHHSYHHVDTFL 694
K L + + E +++ G+MT ++ + H V+T L
Sbjct: 196 LKALLSNQSIENVAEIGEVGKMISGVMTAYNDIEAAGKPMHDVNTIL 242
>gi|296103391|ref|YP_003613537.1| ribonucleoside hydrolase 1 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295057850|gb|ADF62588.1| ribonucleoside hydrolase 1 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 313
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 70/155 (45%), Gaps = 27/155 (17%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ G +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPEPG--FAP-QSCTAVELMAKVLRESAEPVTLVATGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNIF DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIFVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQN 210
V SG+P+ + LD T + N F N
Sbjct: 176 IVFQSGLPIVMAGLDVTHRAQIMTNDIERFRAIGN 210
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 106/258 (41%), Gaps = 55/258 (21%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M +P++FD D D +AL+ L P + +K + S+ T+ V +L ++ R
Sbjct: 1 MAQPIIFDCDPGHDDAIALVLALASPE--LEVKAVTSSAGNQTPDKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 PDIPV------AGGAVKPLM----------------RELIIADNVHGESGLDGPALPEPG 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIV-ESIEPGSKITILTNGPLTNLAQIIGLQ 582
A S AV++ ++ ES EP +T++ GP TN+A ++
Sbjct: 97 FAPQSCT----------------AVELMAKVLRESAEP---VTLVATGPQTNVALLLNSH 137
Query: 583 NS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
S I + I+GG G N + AEFN+F+DP AA+ VF+S L I +
Sbjct: 138 PELHSKIARIVIMGGAMGLGN---------WTPAAEFNIFVDPEAAEIVFQSGLPIVMAG 188
Query: 642 LHMQRRVASFFKILHKLR 659
L + R + + R
Sbjct: 189 LDVTHRAQIMTNDIERFR 206
>gi|427441267|ref|ZP_18925225.1| purine nucleosidase [Pediococcus lolii NGRI 0510Q]
gi|425787140|dbj|GAC46013.1| purine nucleosidase [Pediococcus lolii NGRI 0510Q]
Length = 206
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 60/122 (49%), Gaps = 24/122 (19%)
Query: 73 GRKYAPLRQPTAQQVLINAISAG--PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGG 130
G + A + A +VL I A PIT+ GS+TN A+ L +P +K I+ I MGG
Sbjct: 92 GEEPAEVPANNAVEVLYQTIMANDDPITLVPTGSYTNIALLLKEHPDVKGKIKKIVAMGG 151
Query: 131 AIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLD 190
AI +GN+ AEFN+F+DP AA V SGIPV ++ LD
Sbjct: 152 AI-----------------GMGNM-----TSAAEFNVFTDPHAAEIVYQSGIPVVMVGLD 189
Query: 191 AT 192
T
Sbjct: 190 VT 191
>gi|72162980|ref|YP_290637.1| inosine-uridine preferring nucleoside hydrolase [Thermobifida fusca
YX]
gi|71916712|gb|AAZ56614.1| inosine-uridine preferring nucleoside hydrolase [Thermobifida fusca
YX]
Length = 309
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 78/166 (46%), Gaps = 25/166 (15%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISA-GPITVFVMGSHTNFAIFLMNN 115
+V+ + GL LP+ ++ P+ + A+ ++ A SA G + V +G TN A+ L
Sbjct: 78 HVHGDNGLGGIELPEAAKR--PVSESAAELLVRLARSAPGELNVLALGPLTNLAVALALE 135
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L + + + VMGGA+RS P + P+AE N+ +DP AA
Sbjct: 136 PRLPELVNRVVVMGGAVRS---------------------PGNVTPWAEANVNNDPEAAE 174
Query: 176 TVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSL 221
VL +G +T++ LD T +E++ E AQY + L
Sbjct: 175 AVLGAGFDLTLVALDVTMRALATESWLEELAALPGE-RAQYAHRFL 219
>gi|170725482|ref|YP_001759508.1| ribonucleoside hydrolase 1 [Shewanella woodyi ATCC 51908]
gi|226739288|sp|B1KHA5.1|RIHA_SHEWM RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|169810829|gb|ACA85413.1| Purine nucleosidase [Shewanella woodyi ATCC 51908]
Length = 312
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 72/166 (43%), Gaps = 31/166 (18%)
Query: 51 PVGQRLYVNTNY----GLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGS 104
P+ + L + N GL LP +AP + TA +++ I S P+T+ G
Sbjct: 70 PLARELIIADNVHGETGLDGPVLPD--PSFAP-QAMTAVELMALKIKQSQAPVTLVPTGP 126
Query: 105 HTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAE 164
TN A+ L +P L NIE I +MGGA +GN P AE
Sbjct: 127 LTNIALLLATHPELHSNIEQIVLMGGAA-----------------GVGNW-----TPAAE 164
Query: 165 FNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQN 210
FNIF DP AA V +GIP+T+ LD T V + +N
Sbjct: 165 FNIFVDPEAADMVFKAGIPITMCGLDVTHQAQVMDEDIARIRAIEN 210
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 104/261 (39%), Gaps = 61/261 (23%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M +P++ D D D +A+I L L + + + S+ T++ +L ++GR
Sbjct: 1 MTRPIILDCDPGHDDAIAII--LALSSDAFSPLAVTTSAGNQTPDKTLNNALRILTLLGR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV A G V P LAR+L
Sbjct: 59 SDIPV------AGGAVKP-----------------------------LAREL------II 77
Query: 525 AENSVRFGASQDNDDPELRQPLAVDVWKSIVESI-----EPGSKITILTNGPLTNLAQII 579
A+N D P L P + VE + + + +T++ GPLTN+A ++
Sbjct: 78 ADN---VHGETGLDGPVLPDPSFAPQAMTAVELMALKIKQSQAPVTLVPTGPLTNIALLL 134
Query: 580 GLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIK 638
S I+ + ++GG G N + AEFN+F+DP AA VF++ + I
Sbjct: 135 ATHPELHSNIEQIVLMGGAAGVGNW---------TPAAEFNIFVDPEAADMVFKAGIPIT 185
Query: 639 LIPLHMQRRVASFFKILHKLR 659
+ L + + + + ++R
Sbjct: 186 MCGLDVTHQAQVMDEDIARIR 206
>gi|405379739|ref|ZP_11033586.1| Inosine-uridine nucleoside N-ribohydrolase [Rhizobium sp. CF142]
gi|397323769|gb|EJJ28160.1| Inosine-uridine nucleoside N-ribohydrolase [Rhizobium sp. CF142]
Length = 319
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 73/187 (39%), Gaps = 33/187 (17%)
Query: 63 GLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP-----ITVFVMGSHTNFAIFLMNNPH 117
GL LP+ +K + +A LI A+S IT+ +G TN A+ L P
Sbjct: 86 GLGNTTLPEPVKKAETM---SAVDFLIEALSEAADKGETITICCLGPLTNVAVALRMKPQ 142
Query: 118 LKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTV 177
+ I I +MGGA R P + +EFN+ +DP AA+ V
Sbjct: 143 IADGIGRIVMMGGAYRE---------------------PGNRTMTSEFNVLADPHAAHVV 181
Query: 178 LHSGIPVTIIPLDATKTIPVSENFFVEFERR----QNTYEAQYCFQSLKMIRDTWSGSPP 233
SGIP+ + LDAT + + EF R T F +R S P
Sbjct: 182 FSSGIPIVALALDATHQVMLKPEHVAEFSRVSGRISETLAELMAFWDRNDVRRYGSRGGP 241
Query: 234 FHEAYCM 240
H+ M
Sbjct: 242 LHDPLVM 248
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 8/103 (7%)
Query: 547 AVD-VWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKG 605
AVD + +++ E+ + G ITI GPLTN+A + L+ + + + G E G
Sbjct: 104 AVDFLIEALSEAADKGETITICCLGPLTNVA--VALRMKPQIADGIGRIVMMGGAYREPG 161
Query: 606 NVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
N + +EFN+ DP AA VF S + I + L +V
Sbjct: 162 N-----RTMTSEFNVLADPHAAHVVFSSGIPIVALALDATHQV 199
>gi|270290029|ref|ZP_06196255.1| purine nucleosidase [Pediococcus acidilactici 7_4]
gi|270281566|gb|EFA27398.1| purine nucleosidase [Pediococcus acidilactici 7_4]
Length = 304
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 60/122 (49%), Gaps = 24/122 (19%)
Query: 73 GRKYAPLRQPTAQQVLINAISAG--PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGG 130
G + A + A +VL I A PIT+ GS+TN A+ L +P +K I+ I MGG
Sbjct: 92 GEEPAEVPANNAVEVLYQTIMANDDPITLVPTGSYTNIALLLKEHPDVKGKIKKIVAMGG 151
Query: 131 AIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLD 190
AI +GN+ AEFN+F+DP AA V SGIPV ++ LD
Sbjct: 152 AI-----------------GMGNM-----TSAAEFNVFTDPHAAEIVYQSGIPVVMVGLD 189
Query: 191 AT 192
T
Sbjct: 190 VT 191
>gi|440723527|ref|ZP_20903890.1| inosine-uridine preferring nucleoside hydrolase [Pseudomonas
syringae BRIP34876]
gi|440728011|ref|ZP_20908234.1| inosine-uridine preferring nucleoside hydrolase [Pseudomonas
syringae BRIP34881]
gi|440359502|gb|ELP96810.1| inosine-uridine preferring nucleoside hydrolase [Pseudomonas
syringae BRIP34876]
gi|440362540|gb|ELP99727.1| inosine-uridine preferring nucleoside hydrolase [Pseudomonas
syringae BRIP34881]
Length = 330
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
Query: 93 SAGPITVFVMGSHTNFA--IFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDS 150
S PITV +G TN A + L + P K IE I M GA+ D N + +++
Sbjct: 120 SQDPITVLSLGGFTNIAKMLTLSSQPADFKMIEQIVAMAGAVYVDG-NVAALNNAQKAWD 178
Query: 151 IGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFF 202
G Y SN YAE+N+F DP AA V S +P+T++PLD I + +++
Sbjct: 179 QGVAY--SSNHYAEWNVFVDPVAANNVFQSNLPLTLVPLDVCNQIILDASYW 228
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 119/271 (43%), Gaps = 60/271 (22%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLL---HM 461
M + V+ D DM D L++ YL+K P I++ GI V+ G D+ + ++ H+
Sbjct: 1 MNRKVIIDTDMGWDDVLSIAYLMKRPD--IDILGITVTGCG-----ETDLGWGVVIAQHL 53
Query: 462 MGRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPR 521
+G I LG V A G P +Y P D + + GL
Sbjct: 54 LG---IGNRLGSVVAKGTDQP-------LEYDNRFPQPFKN--DMNDIMGL--------- 92
Query: 522 RYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSK-ITILTNGPLTNLAQIIG 580
G PEL + W+ + ++++ IT+L+ G TN+A+++
Sbjct: 93 ---------LGTLNPATLPELS---TLPAWEFMYQTVKNSQDPITVLSLGGFTNIAKMLT 140
Query: 581 LQNSSSVIQDVYIVGGNKGQDNEKGNVFTV-------------PSSKYAEFNMFLDPLAA 627
L + + + + + G GNV + S+ YAE+N+F+DP+AA
Sbjct: 141 LSSQPADFKMIEQIVAMAGAVYVDGNVAALNNAQKAWDQGVAYSSNHYAEWNVFVDPVAA 200
Query: 628 KAVFESKLEIKLIPLHMQRRV---ASFFKIL 655
VF+S L + L+PL + ++ AS+++++
Sbjct: 201 NNVFQSNLPLTLVPLDVCNQIILDASYWQLI 231
>gi|398987657|ref|ZP_10692092.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas sp. GM24]
gi|398150461|gb|EJM39052.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas sp. GM24]
Length = 342
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
IT+ ++G TN A+ L+ P + + I+ + +MGGA FN N +
Sbjct: 150 ITIAMLGPQTNLALALIQEPEIVQGIKEVVIMGGA----HFNGGNIT------------- 192
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSE 199
P AEFN+F+DP AA VL SG+ +T +PLD T I S+
Sbjct: 193 ----PVAEFNLFADPQAAEVVLKSGVKLTYLPLDVTHKILTSD 231
Score = 46.6 bits (109), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 100/240 (41%), Gaps = 46/240 (19%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
++ D D A D +AL++ L P EL N++ + + T GR+D+P
Sbjct: 34 LIIDTDPGADDVVALLFALASPDEL-NIRALTTVAGNVRLDKTSRNARLAREWAGREDVP 92
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V G PK P + YA+ I G L T++ P++ AE +
Sbjct: 93 VYAG--------APK-PLMRTPIYAENIHGKEG--LSGVTVH--------EPKKGLAEGN 133
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVI 588
AV+ ++ +P S ITI GP TNLA + L ++
Sbjct: 134 ------------------AVNYLIDTLKKAKPHS-ITIAMLGPQTNLA--LALIQEPEIV 172
Query: 589 QDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
Q + V G GN+ V AEFN+F DP AA+ V +S +++ +PL + ++
Sbjct: 173 QGIKEVVIMGGAHFNGGNITPV-----AEFNLFADPQAAEVVLKSGVKLTYLPLDVTHKI 227
>gi|114565176|ref|YP_752690.1| ribonucleoside hydrolase 1 [Shewanella frigidimarina NCIMB 400]
gi|114336469|gb|ABI73851.1| Purine nucleosidase [Shewanella frigidimarina NCIMB 400]
Length = 310
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 70/148 (47%), Gaps = 31/148 (20%)
Query: 51 PVGQRLYVNTNY----GLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGS 104
P+ + L + N GL LP +AP+ Q TA +++ + + S P+T+ G
Sbjct: 70 PLARELIIADNVHGESGLDGPKLPDPA--FAPVEQ-TAIELMADKVRNSKQPVTLVPTGP 126
Query: 105 HTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAE 164
TN A+FL +P L NI+ I +MGGA +GN P AE
Sbjct: 127 LTNIALFLAAHPELHSNIDSIVLMGGAA-----------------GVGNW-----TPAAE 164
Query: 165 FNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
FNIF DP AA V SG+P+ + LD T
Sbjct: 165 FNIFVDPEAADMVFKSGLPIVMCGLDVT 192
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 103/261 (39%), Gaps = 61/261 (23%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M +PV+ D D D ++LI L L +++ + S+ T++ +L ++GR
Sbjct: 1 MKRPVILDCDPGHDDAISLI--LALSSAKLDVLAVTTSAGNQTPDKTLNNALRVLTLLGR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV G PK LAR+L
Sbjct: 59 HDIPVASG--------APK---------------------------PLAREL------II 77
Query: 525 AENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSK-----ITILTNGPLTNLAQII 579
A+N D P+L P V ++ +E + + +T++ GPLTN+A +
Sbjct: 78 ADN---VHGESGLDGPKLPDPAFAPVEQTAIELMADKVRNSKQPVTLVPTGPLTNIALFL 134
Query: 580 GLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIK 638
S I + ++GG G N + AEFN+F+DP AA VF+S L I
Sbjct: 135 AAHPELHSNIDSIVLMGGAAGVGN---------WTPAAEFNIFVDPEAADMVFKSGLPIV 185
Query: 639 LIPLHMQRRVASFFKILHKLR 659
+ L + + + ++R
Sbjct: 186 MCGLDVTHEAQIMDEDIERIR 206
>gi|398817903|ref|ZP_10576504.1| Inosine-uridine nucleoside N-ribohydrolase [Brevibacillus sp. BC25]
gi|398029038|gb|EJL22535.1| Inosine-uridine nucleoside N-ribohydrolase [Brevibacillus sp. BC25]
Length = 320
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 69/156 (44%), Gaps = 27/156 (17%)
Query: 55 RLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNFAIFL 112
RL+ N GL LP+ P A Q LI+AI P +T+ +GS TN A +
Sbjct: 79 RLFHGEN-GLGNVVLPEPSTTAQP---QCATQFLISAIKEYPHELTLVTVGSMTNLAQAI 134
Query: 113 MNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPF 172
M P + ++ + VMGGA+ P + P AE NI +DP
Sbjct: 135 MAAPEIITLVKRVVVMGGAVT---------------------VPGNRTPVAEANICADPE 173
Query: 173 AAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERR 208
AA V SGIPVT++ LD T ++ E+ +
Sbjct: 174 AAAYVFQSGIPVTLVGLDVTMQTLLTREHLQEWRAK 209
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 22/165 (13%)
Query: 512 LARDLPRSPRRYTAEN---SVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILT 568
+ RDL R + EN +V P+ + K E ++T++T
Sbjct: 70 IVRDLTGKARLFHGENGLGNVVLPEPSTTAQPQCATQFLISAIK------EYPHELTLVT 123
Query: 569 NGPLTNLAQ-IIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSK--YAEFNMFLDPL 625
G +TNLAQ I+ ++++ V ++GG TVP ++ AE N+ DP
Sbjct: 124 VGSMTNLAQAIMAAPEIITLVKRVVVMGG----------AVTVPGNRTPVAEANICADPE 173
Query: 626 AAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFS 670
AA VF+S + + L+ L + + + L + R + VF+
Sbjct: 174 AAAYVFQSGIPVTLVGLDVTMQTLLTREHLQEWRAKDTRLSHVFA 218
>gi|417861504|ref|ZP_12506559.1| putative nucleoside hydrolase protein [Agrobacterium tumefaciens
F2]
gi|338821908|gb|EGP55877.1| putative nucleoside hydrolase protein [Agrobacterium tumefaciens
F2]
Length = 319
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 64/150 (42%), Gaps = 29/150 (19%)
Query: 63 GLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP-----ITVFVMGSHTNFAIFLMNNPH 117
GL LP+ +K + +A LI A+ IT+ +G TN A+ L P
Sbjct: 86 GLGNTVLPEPAKKVETM---SAVDFLIEALGGAAKKGERITLCCLGPMTNVAVALRMKPQ 142
Query: 118 LKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTV 177
+ + IE I +MGGA R P + +E+N+ +DP A + V
Sbjct: 143 IAEGIERIVMMGGAYRE---------------------PGNRTMTSEYNVLADPHAVHVV 181
Query: 178 LHSGIPVTIIPLDATKTIPVSENFFVEFER 207
SGIP+ + LDAT + + EF R
Sbjct: 182 FSSGIPIVALALDATHQVMLKPEHVTEFSR 211
>gi|270263713|ref|ZP_06191982.1| ribonucleoside hydrolase 1 [Serratia odorifera 4Rx13]
gi|421782141|ref|ZP_16218600.1| cytidine/uridine-specific hydrolase [Serratia plymuthica A30]
gi|270042597|gb|EFA15692.1| ribonucleoside hydrolase 1 [Serratia odorifera 4Rx13]
gi|407755697|gb|EKF65821.1| cytidine/uridine-specific hydrolase [Serratia plymuthica A30]
Length = 310
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 66/141 (46%), Gaps = 33/141 (23%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQV--LINAI---SAGPITVFVMGSHTNFAIF 111
+V+ G+ LP P +P Q LI A+ S PIT+ V G TN A+
Sbjct: 80 HVHGKTGMGNTHLP------TPTIKPVTQTAVELIAALLRTSPQPITLVVTGPMTNIALL 133
Query: 112 LMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDP 171
L+ + LK NIE I MGG + + GN + P AEFNIF DP
Sbjct: 134 LVQHAELKGNIERIVFMGGGMNA-----------------GN-----ATPVAEFNIFVDP 171
Query: 172 FAAYTVLHSGIPVTIIPLDAT 192
AA VL SG+P+T+ L+ T
Sbjct: 172 EAAEIVLKSGVPLTMAGLNVT 192
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 107/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M +P++ D D D +AL L+ P +++K I S+ T+ LL +M R
Sbjct: 1 MPRPIIIDCDPGLDDAIALAMALRSPE--LDIKAITTSAGNQTPEKTLHNALGLLTLMKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
+DIPV A G P P+ + G G ++ LP +
Sbjct: 59 EDIPV------AAGAAAPLMRPLVIADHVH----GKTGMGNTH--------LPTPTIKPV 100
Query: 525 AENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS 584
+ +V A+ P QP IT++ GP+TN+A ++ +Q++
Sbjct: 101 TQTAVELIAALLRTSP---QP------------------ITLVVTGPMTNIALLL-VQHA 138
Query: 585 S--SVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
I+ + +GG N ++ AEFN+F+DP AA+ V +S + + + L
Sbjct: 139 ELKGNIERIVFMGGGMNAGN---------ATPVAEFNIFVDPEAAEIVLKSGVPLTMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
++ + + + ++R
Sbjct: 190 NVTHQALVLPQDIERIR 206
>gi|384047784|ref|YP_005495801.1| inosine-uridine preferring nucleoside hydrolase family protein
[Bacillus megaterium WSH-002]
gi|345445475|gb|AEN90492.1| putative inosine-uridine preferring nucleoside hydrolase family
protein [Bacillus megaterium WSH-002]
Length = 312
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 34/202 (16%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
S P+T+ G TN A+ L+ P +K+NI I +MGG + G
Sbjct: 116 SEDPVTLLPTGPLTNIALALIKAPEIKENIGEIILMGGG------------------TFG 157
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTY 212
N P AEFNI++DP AA V SGIP+ ++ LD T ++N + N
Sbjct: 158 NW-----TPTAEFNIWADPEAAKKVFDSGIPLVVMGLDITHQAVATDNVINQVMNIDNNV 212
Query: 213 EAQYCFQSLKMIRDTWSGS-----PPFHE----AYCMWDSFMAGVALSIMLNSSSHNGEN 263
A+ + L + T+ + PP H+ AYC+ ++I++ +
Sbjct: 213 -AKKVGELLAFFKSTYKETFGFDGPPVHDVLTVAYCVAPELFTLKEVNIVVETRGEYTAG 271
Query: 264 ACSEMEYMNLTVVTSNEPYGIS 285
S ++ + +T +N +G++
Sbjct: 272 TTS-VDLLGVTGRKANAKFGLT 292
>gi|453062254|gb|EMF03245.1| ribonucleoside hydrolase 1 [Serratia marcescens VGH107]
Length = 310
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 77/192 (40%), Gaps = 54/192 (28%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQRLYVNT 60
+M R+DIPV G GG L ++ D YV+
Sbjct: 55 LMQREDIPVAAGA-GGPLMRELVIAD------------------------------YVHG 83
Query: 61 NYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKK 120
G+ LP K P L+ A S PIT+ V G TN A+ L + LK
Sbjct: 84 KTGMGNTHLPTPTLKPDPRGAVELIADLLRA-SPQPITLVVTGPMTNIALLLAQHAELKS 142
Query: 121 NIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHS 180
IE I MGG + N+ N++ P AEFNIF DP AA VL S
Sbjct: 143 RIERIVFMGGGM-----NAGNTT-----------------PVAEFNIFVDPEAAEMVLKS 180
Query: 181 GIPVTIIPLDAT 192
G+P+T+ L+ T
Sbjct: 181 GVPLTMAGLNVT 192
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 105/256 (41%), Gaps = 51/256 (19%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M +P++ D D D +AL L+ P +++K I S+ T+ LL +M R
Sbjct: 1 MPRPIIIDCDPGLDDAIALAMALRSPE--LDVKAITTSAGNQTPEKTLHNALGLLTLMQR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
+DIPV G GG + + +D ++G T
Sbjct: 59 EDIPVAAG--------------AGGPLMRE--------LVIADYVHG-----------KT 85
Query: 525 AENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS 584
+ DP L D+ ++ S +P IT++ GP+TN+A ++
Sbjct: 86 GMGNTHLPTPTLKPDPRGAVELIADLLRA---SPQP---ITLVVTGPMTNIALLLAQHAE 139
Query: 585 -SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLH 643
S I+ + +GG N ++ AEFN+F+DP AA+ V +S + + + L+
Sbjct: 140 LKSRIERIVFMGGGMNAGN---------TTPVAEFNIFVDPEAAEMVLKSGVPLTMAGLN 190
Query: 644 MQRRVASFFKILHKLR 659
+ + + + ++R
Sbjct: 191 VTHQALVLPQDIERIR 206
>gi|398830914|ref|ZP_10589095.1| Inosine-uridine nucleoside N-ribohydrolase [Phyllobacterium sp.
YR531]
gi|398213494|gb|EJN00088.1| Inosine-uridine nucleoside N-ribohydrolase [Phyllobacterium sp.
YR531]
Length = 312
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 65/139 (46%), Gaps = 27/139 (19%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI---SAGPITVFVMGSHTNFAIFLM 113
+V+ GL LP+ PL+ A +I+ + + G +T+ V+G TN A+ L+
Sbjct: 80 HVHGKTGLDGPDLPE---PTMPLQPQHAVDFIIDTLRNEAPGTVTLCVLGPLTNIALVLL 136
Query: 114 NNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFA 173
P L I+ I +MGG F N + P AEFNI+ DP A
Sbjct: 137 RAPDLAPRIKEIVLMGGGF----FEGGNIT-----------------PTAEFNIYVDPQA 175
Query: 174 AYTVLHSGIPVTIIPLDAT 192
A VL SGIP I+PLD T
Sbjct: 176 AQIVLQSGIPTVILPLDVT 194
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 67/127 (52%), Gaps = 14/127 (11%)
Query: 538 DDPELRQPL----AVDVWKSIVESIEPGSKITILTNGPLTNLAQII-GLQNSSSVIQDVY 592
D PE PL AVD + + PG+ +T+ GPLTN+A ++ + + I+++
Sbjct: 91 DLPEPTMPLQPQHAVDFIIDTLRNEAPGT-VTLCVLGPLTNIALVLLRAPDLAPRIKEIV 149
Query: 593 IVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFF 652
++GG E GN+ + AEFN+++DP AA+ V +S + ++PL + + +
Sbjct: 150 LMGGGF---FEGGNI-----TPTAEFNIYVDPQAAQIVLQSGIPTVILPLDVTHQALTTA 201
Query: 653 KILHKLR 659
K + + R
Sbjct: 202 KRIERFR 208
>gi|420246233|ref|ZP_14749699.1| Inosine-uridine nucleoside N-ribohydrolase [Rhizobium sp. CF080]
gi|398042833|gb|EJL35794.1| Inosine-uridine nucleoside N-ribohydrolase [Rhizobium sp. CF080]
Length = 333
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 60/127 (47%), Gaps = 23/127 (18%)
Query: 78 PLRQPTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSD 135
PL Q A +I+ + A P IT+ +G TN A+ ++ P L KN+ I MGGA
Sbjct: 128 PLGQAHAVDFIIDQVMAHPGEITLCPIGPMTNVALAMIKEPRLSKNLREIVFMGGA---- 183
Query: 136 CFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTI 195
P ++ AEFNI+ DP AA+ VL SG+ +T+I LD T+
Sbjct: 184 -----------------AFCPGNTTAAAEFNIYVDPQAAHVVLSSGVKLTMIGLDVTRKA 226
Query: 196 PVSENFF 202
+ +
Sbjct: 227 LIDRDLL 233
>gi|410944092|ref|ZP_11375833.1| inosine-uridine preferring nucleoside hydrolase [Gluconobacter
frateurii NBRC 101659]
Length = 317
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 66/152 (43%), Gaps = 22/152 (14%)
Query: 41 AGECRYRQAIPVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVF 100
AG R P+ +V+ G+ A LP+ + + T ++ AG IT+
Sbjct: 70 AGAARPLHKAPISAE-HVHGETGMGGANLPEPRLRARAIDAATHLVDVLRKEPAGSITLV 128
Query: 101 VMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSN 160
+G TN A L + P + I + MGGA R GN+
Sbjct: 129 CLGPMTNLAHALTHAPDIAPKIARLVAMGGAQREG----------------GNI-----T 167
Query: 161 PYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
P AEFN F DP AA V+ +GIP T++PLD T
Sbjct: 168 PTAEFNFFVDPHAAKIVMAAGIPTTLLPLDVT 199
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 11/138 (7%)
Query: 539 DPELRQPLAVDVWKSIVESI--EPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGG 596
+P LR A+D +V+ + EP IT++ GP+TNLA L ++ + + +
Sbjct: 99 EPRLRA-RAIDAATHLVDVLRKEPAGSITLVCLGPMTNLAH--ALTHAPDIAPKIARLVA 155
Query: 597 NKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILH 656
G E GN+ + AEFN F+DP AAK V + + L+PL + R + + L
Sbjct: 156 MGGAQREGGNI-----TPTAEFNFFVDPHAAKIVMAAGIPTTLLPLDVTHRAIATPRRLA 210
Query: 657 KLRDRKKTPESVFSQRLL 674
+ KTP R+L
Sbjct: 211 PIAG-LKTPVGDMVVRML 227
>gi|358381354|gb|EHK19030.1| hypothetical protein TRIVIDRAFT_204422 [Trichoderma virens Gv29-8]
Length = 323
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 67/139 (48%), Gaps = 25/139 (17%)
Query: 76 YAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSD 135
YAP+ + ++ N G IT+ +G TN AI L+ P +K I+ + +MGG
Sbjct: 110 YAPVA--IVEHIMANP---GEITLVAIGPLTNVAIALLLEPRIKSAIKELVIMGGVF--- 161
Query: 136 CFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTI 195
+G +Y D EFN+FSDP AA TVL SGIP I LD T +
Sbjct: 162 ---------------LGTMYSRDKP--GEFNVFSDPEAARTVLRSGIPQRWIGLDCTLRV 204
Query: 196 PVSENFFVEFERRQNTYEA 214
+S +E ++ +++ A
Sbjct: 205 RLSMADALELKKSTSSFAA 223
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 54/99 (54%), Gaps = 11/99 (11%)
Query: 553 SIVESI--EPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEKGNVFT 609
+IVE I PG +IT++ GPLTN+A + L+ S I+++ I+GG G +++
Sbjct: 114 AIVEHIMANPG-EITLVAIGPLTNVAIALLLEPRIKSAIKELVIMGGVF-----LGTMYS 167
Query: 610 VPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
K EFN+F DP AA+ V S + + I L RV
Sbjct: 168 --RDKPGEFNVFSDPEAARTVLRSGIPQRWIGLDCTLRV 204
>gi|399013599|ref|ZP_10715903.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas sp. GM16]
gi|398113374|gb|EJM03222.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas sp. GM16]
Length = 277
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
IT+ ++G TN A+ L+ P + + I+ + +MGGA FN N +
Sbjct: 85 ITIAMLGPQTNLALALIQEPEIVQGIKEVVIMGGA----HFNGGNIT------------- 127
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSE 199
P AEFN+F+DP AA VL SG+ +T +PLD T I S+
Sbjct: 128 ----PVAEFNLFADPQAAEVVLKSGVKLTYLPLDVTHKILTSD 166
Score = 42.7 bits (99), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
Query: 547 AVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGN 606
AV+ ++ +P S ITI GP TNLA + L ++Q + V G GN
Sbjct: 69 AVNYLIDTLKKAKPHS-ITIAMLGPQTNLA--LALIQEPEIVQGIKEVVIMGGAHFNGGN 125
Query: 607 VFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVAS 650
+ V AEFN+F DP AA+ V +S +++ +PL + ++ +
Sbjct: 126 ITPV-----AEFNLFADPQAAEVVLKSGVKLTYLPLDVTHKILT 164
>gi|345298331|ref|YP_004827689.1| Pyrimidine-specific ribonucleoside hydrolase rihA [Enterobacter
asburiae LF7a]
gi|345092268|gb|AEN63904.1| Pyrimidine-specific ribonucleoside hydrolase rihA [Enterobacter
asburiae LF7a]
Length = 313
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ G + P + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPEPG--FVP-QNCTAVELMAKVLRESAEPVTLVATGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L K I I +MGGA+ +GN P AEFNIF DP AA
Sbjct: 138 PELHKKIVRIVIMGGAM-----------------GLGNW-----TPAAEFNIFVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SG+P+ + LD T
Sbjct: 176 IVFQSGLPIVMAGLDVT 192
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 101/252 (40%), Gaps = 67/252 (26%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P +++K + S+ T+ V +L ++ R
Sbjct: 1 MALPIILDCDPGHDDAIALVLALASPE--LDVKAVTSSAGNQTPDKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV A G + P L R+L
Sbjct: 59 TDIPV------AGGAIKP-----------------------------LMREL------II 77
Query: 525 AENSVRFGASQDNDDPELRQP-------LAVDVWKSIV-ESIEPGSKITILTNGPLTNLA 576
A+N D P L +P AV++ ++ ES EP +T++ GP TN+A
Sbjct: 78 ADN---VHGESGLDGPALPEPGFVPQNCTAVELMAKVLRESAEP---VTLVATGPQTNVA 131
Query: 577 QIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ I + I+GG G N + AEFN+F+DP AA+ VF+S L
Sbjct: 132 LLLNSHPELHKKIVRIVIMGGAMGLGN---------WTPAAEFNIFVDPEAAEIVFQSGL 182
Query: 636 EIKLIPLHMQRR 647
I + L + R
Sbjct: 183 PIVMAGLDVTHR 194
>gi|448240948|ref|YP_007405001.1| ribonucleoside hydrolase 1 [Serratia marcescens WW4]
gi|445211312|gb|AGE16982.1| ribonucleoside hydrolase 1 [Serratia marcescens WW4]
Length = 310
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 77/192 (40%), Gaps = 54/192 (28%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQRLYVNT 60
+M R+DIPV G GG L ++ D YV+
Sbjct: 55 LMQREDIPVAAGA-GGPLMRELVIAD------------------------------YVHG 83
Query: 61 NYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKK 120
G+ LP K P L+ A S PIT+ V G TN A+ L + LK
Sbjct: 84 KTGMGNTHLPTPTLKPDPRGAVELIADLLRA-SPQPITLVVTGPMTNIALLLAQHAELKS 142
Query: 121 NIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHS 180
IE I MGG + N+ N++ P AEFNIF DP AA VL S
Sbjct: 143 RIERIVFMGGGM-----NAGNTT-----------------PVAEFNIFVDPEAAEMVLKS 180
Query: 181 GIPVTIIPLDAT 192
G+P+T+ L+ T
Sbjct: 181 GVPLTMAGLNVT 192
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 105/256 (41%), Gaps = 51/256 (19%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M +P++ D D D +AL L+ P +++K I S+ T+ LL +M R
Sbjct: 1 MPRPIIIDCDPGLDDAIALAMALRSPE--LDVKAITTSAGNQTPEKTLHNALGLLTLMQR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
+DIPV G GG + + +D ++G T
Sbjct: 59 EDIPVAAG--------------AGGPLMRE--------LVIADYVHG-----------KT 85
Query: 525 AENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS 584
+ DP L D+ ++ S +P IT++ GP+TN+A ++
Sbjct: 86 GMGNTHLPTPTLKPDPRGAVELIADLLRA---SPQP---ITLVVTGPMTNIALLLAQHAE 139
Query: 585 -SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLH 643
S I+ + +GG N ++ AEFN+F+DP AA+ V +S + + + L+
Sbjct: 140 LKSRIERIVFMGGGMNAGN---------TTPVAEFNIFVDPEAAEMVLKSGVPLTMAGLN 190
Query: 644 MQRRVASFFKILHKLR 659
+ + + + ++R
Sbjct: 191 VTHQALVLPQDIERIR 206
>gi|452823127|gb|EME30140.1| purine nucleosidase [Galdieria sulphuraria]
Length = 377
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 29/146 (19%)
Query: 96 PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY 155
P+T+ G TN A+F+ P L++NI ++ MGG GN++
Sbjct: 173 PLTIIATGPLTNIALFVTLYPELRRNIRIVF-MGGTFER-----------------GNIH 214
Query: 156 PDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQ 215
P AEFNI DP AA+ V H G+ +T++PLD T + V+++ NT A+
Sbjct: 215 PT-----AEFNILHDPEAAHIVFHCGVSLTMVPLDLTHQVLVTQDILGRIHAL-NTPFAK 268
Query: 216 YCFQSLKMIRDTWS-----GSPPFHE 236
++ R+++ SPP H+
Sbjct: 269 NMAGLVEFFRNSYQKTFGFASPPLHD 294
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 104/268 (38%), Gaps = 25/268 (9%)
Query: 397 KPDFGKKLMGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVY 456
K D K+ PV+ D D D A++ P EL +L I S + T
Sbjct: 13 KVDIMKERRPTPVILDCDPGHDDAFAIVLAAFSPEEL-SLLAITTVSGNQSLEKTTLNAL 71
Query: 457 DLLHMMG--RDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLAR 514
+LH G + IPV A G P P + A+ L T Y +
Sbjct: 72 RILHACGFQENSIPV------AKGASAPLMLP----ELAQPKSQEESISLIVSTHYDTSY 121
Query: 515 DLP---RSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGP 571
P R P E+ + P+L Q A ++ IV+ P +TI+ GP
Sbjct: 122 HQPLVGRHPVEVHGESGMDGAEFPSTVIPKLDQRKAWNLMADIVQLYSPEFPLTIIATGP 181
Query: 572 LTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVF 631
LTN+A + L + +GG E+GN+ AEFN+ DP AA VF
Sbjct: 182 LTNIALFVTLYPELRRNIRIVFMGGTF----ERGNIHPT-----AEFNILHDPEAAHIVF 232
Query: 632 ESKLEIKLIPLHMQRRVASFFKILHKLR 659
+ + ++PL + +V IL ++
Sbjct: 233 HCGVSLTMVPLDLTHQVLVTQDILGRIH 260
>gi|209965736|ref|YP_002298651.1| Pyrimidine-specific ribonucleoside hydrolase [Rhodospirillum
centenum SW]
gi|209959202|gb|ACI99838.1| Pyrimidine-specific ribonucleoside hydrolase [Rhodospirillum
centenum SW]
Length = 320
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 76/167 (45%), Gaps = 28/167 (16%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISA---GPITVFVMGSHTNFAIFLMN 114
V+ + GL LP+ PL++ A ++ + A G +T+ +G TN A LM
Sbjct: 90 VHGSTGLDGPVLPE---PTLPLQEKHAVDFIVETVMAHEPGSVTLVPVGPLTNVARALMR 146
Query: 115 NPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAA 174
P L ++ I +MGGA QSE GN S P AEFNI+ DP AA
Sbjct: 147 EPALAARLKRIVLMGGA------------QSEG----GN-----STPCAEFNIYVDPHAA 185
Query: 175 YTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSL 221
V SG P+ PLD T + ++ + E R + AQ F+ L
Sbjct: 186 DVVFRSGAPIVAFPLDVTHKV-LTTHARKEAIRALGSRVAQATFEML 231
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 63/108 (58%), Gaps = 10/108 (9%)
Query: 542 LRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS-SSVIQDVYIVGGNKGQ 600
L++ AVD V + EPGS +T++ GPLTN+A+ + + + ++ ++ + ++GG +
Sbjct: 108 LQEKHAVDFIVETVMAHEPGS-VTLVPVGPLTNVARALMREPALAARLKRIVLMGGAQ-- 164
Query: 601 DNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
+E GN S+ AEFN+++DP AA VF S I PL + +V
Sbjct: 165 -SEGGN-----STPCAEFNIYVDPHAADVVFRSGAPIVAFPLDVTHKV 206
>gi|398961513|ref|ZP_10678762.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas sp. GM30]
gi|398152352|gb|EJM40872.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas sp. GM30]
Length = 342
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 21/103 (20%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
IT+ ++G TN A+ L+ P + I+ + VMGGA FN N +
Sbjct: 150 ITIAMLGPQTNLALALIQEPEIVNGIKEVVVMGGA----HFNGGNIT------------- 192
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSE 199
P AEFN+F+DP AA VL SG+ +T +PLD T I S+
Sbjct: 193 ----PVAEFNLFADPQAAEVVLKSGVKLTYLPLDVTHKILTSD 231
Score = 45.8 bits (107), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 104/242 (42%), Gaps = 50/242 (20%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
++ D D A D +AL++ L P EL N++ + + T GR+D+P
Sbjct: 34 LIIDTDPGADDVVALLFALASPDEL-NIRALTTVAGNVRLDKTSRNARLAREWAGREDVP 92
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V G PK P + YA+ I G L T++ P++ AE +
Sbjct: 93 VYAG--------APK-PLMRTPIYAENIHGKEG--LSGVTVH--------EPKKGLAEGN 133
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSV- 587
AV+ ++ +P S ITI GP TNLA + +Q V
Sbjct: 134 ------------------AVNYLIDTLKKAKPHS-ITIAMLGPQTNLALAL-IQEPEIVN 173
Query: 588 -IQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQR 646
I++V ++GG GN+ V AEFN+F DP AA+ V +S +++ +PL +
Sbjct: 174 GIKEVVVMGG---AHFNGGNITPV-----AEFNLFADPQAAEVVLKSGVKLTYLPLDVTH 225
Query: 647 RV 648
++
Sbjct: 226 KI 227
>gi|302035697|ref|YP_003796019.1| inosine-uridine preferring nucleoside hydrolase [Candidatus
Nitrospira defluvii]
gi|300603761|emb|CBK40093.1| Inosine-uridine preferring nucleoside hydrolase [Candidatus
Nitrospira defluvii]
Length = 328
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 27/141 (19%)
Query: 71 QGGRKYAPLRQP----TAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEH 124
+G +Y +R P TAQ V + P +T+ +G TN A+ L NP +
Sbjct: 102 EGAPRYPQVRLPSVLSTAQDVWNECVRRYPDEVTLITLGPLTNVAVALKVNPLTVQKFRS 161
Query: 125 IYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPV 184
+ VMGGAI P + P AEFN++ DP AA+ V + +P+
Sbjct: 162 VIVMGGAIG---------------------VPGNVAPAAEFNMYVDPHAAHRVFQASLPL 200
Query: 185 TIIPLDATKTIPVSENFFVEF 205
T++PLD T + V+ + +
Sbjct: 201 TLVPLDVTTRVGVTRESLMTW 221
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 19/116 (16%)
Query: 540 PELRQP----LAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQ---DVY 592
P++R P A DVW V ++T++T GPLTN+A + L+ + +Q V
Sbjct: 108 PQVRLPSVLSTAQDVWNECVRRYP--DEVTLITLGPLTNVA--VALKVNPLTVQKFRSVI 163
Query: 593 IVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
++GG G GNV + AEFNM++DP AA VF++ L + L+PL + RV
Sbjct: 164 VMGGAIGV---PGNV-----APAAEFNMYVDPHAAHRVFQASLPLTLVPLDVTTRV 211
>gi|419957868|ref|ZP_14473934.1| ribonucleoside hydrolase 1 [Enterobacter cloacae subsp. cloacae
GS1]
gi|388608026|gb|EIM37230.1| ribonucleoside hydrolase 1 [Enterobacter cloacae subsp. cloacae
GS1]
Length = 313
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPE--PDFAP-QNCTAVELMAKVLRESAEPVTLVATGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L NI I +MGGA+ +GN P AEFNIF DP AA
Sbjct: 138 PELHSNIARIVIMGGAM-----------------GLGNW-----TPAAEFNIFVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SG+P+ + LD T
Sbjct: 176 IVFQSGLPIVMAGLDVT 192
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 107/264 (40%), Gaps = 67/264 (25%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M +P++ D D D +AL+ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MAQPIILDCDPGHDDAIALVLALASPE--LDVKAITSSAGNQTPDKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV A G V P L R+L
Sbjct: 59 TDIPV------AGGAVKP-----------------------------LMREL------II 77
Query: 525 AENSVRFGASQDNDDPELRQP-------LAVDVWKSIV-ESIEPGSKITILTNGPLTNLA 576
A+N D P L +P AV++ ++ ES EP +T++ GP TN+A
Sbjct: 78 ADN---VHGESGLDGPALPEPDFAPQNCTAVELMAKVLRESAEP---VTLVATGPQTNVA 131
Query: 577 QIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ S I + I+GG G N + AEFN+F+DP AA+ VF+S L
Sbjct: 132 LLLNSHPELHSNIARIVIMGGAMGLGN---------WTPAAEFNIFVDPEAAEIVFQSGL 182
Query: 636 EIKLIPLHMQRRVASFFKILHKLR 659
I + L + R + + + R
Sbjct: 183 PIVMAGLDVTHRAQIMAQDIERFR 206
>gi|127511631|ref|YP_001092828.1| ribonucleoside hydrolase 1 [Shewanella loihica PV-4]
gi|126636926|gb|ABO22569.1| Purine nucleosidase [Shewanella loihica PV-4]
Length = 335
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 68/148 (45%), Gaps = 31/148 (20%)
Query: 51 PVGQRLYVNTNY----GLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGS 104
P+ + L + N GL LP + PL Q A +++ + SA P+T+ G
Sbjct: 94 PLARELIIADNVHGESGLDGPKLPD--PSFDPLTQ-NAIELMAEKVRQSAVPVTLVPSGP 150
Query: 105 HTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAE 164
TN A+F+ N P L +E I +MGGA +GN P AE
Sbjct: 151 LTNIALFIANYPELHSKVERIVLMGGAA-----------------GVGNW-----TPAAE 188
Query: 165 FNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
FNIF DP AA V SGIP+T+ LD T
Sbjct: 189 FNIFVDPEAADMVFKSGIPITMCGLDVT 216
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 105/257 (40%), Gaps = 55/257 (21%)
Query: 406 GKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRD 465
P++ D D D ++LI L L E +N + S+ T++ +L ++ R
Sbjct: 26 ATPIILDCDPGHDDAISLI--LALSSERLNPLAVTTSAGNQTPDKTLNNALRILTLLNRA 83
Query: 466 DIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRYT 524
D+PV A G V P + + +D ++G + D P+ P
Sbjct: 84 DMPV------AGGAVKPL----------------ARELIIADNVHGESGLDGPKLP---- 117
Query: 525 AENSVRFGASQDNDDPELRQPLAVDVWKSIVESI-EPGSKITILTNGPLTNLAQIIG-LQ 582
DP PL + + + E + + +T++ +GPLTN+A I
Sbjct: 118 --------------DPSF-DPLTQNAIELMAEKVRQSAVPVTLVPSGPLTNIALFIANYP 162
Query: 583 NSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S ++ + ++GG G N + AEFN+F+DP AA VF+S + I + L
Sbjct: 163 ELHSKVERIVLMGGAAGVGNW---------TPAAEFNIFVDPEAADMVFKSGIPITMCGL 213
Query: 643 HMQRRVASFFKILHKLR 659
+ + + ++R
Sbjct: 214 DVTHEAQIMDEDIERIR 230
>gi|339007756|ref|ZP_08640330.1| pyrimidine-specific ribonucleoside hydrolase RihA [Brevibacillus
laterosporus LMG 15441]
gi|338774959|gb|EGP34488.1| pyrimidine-specific ribonucleoside hydrolase RihA [Brevibacillus
laterosporus LMG 15441]
Length = 315
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 29/191 (15%)
Query: 63 GLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKK 120
G+ +LPQ K + Q A +I + P +T+ + S TN A+ +M +P +
Sbjct: 87 GIGNTYLPQ--PKVTAIDQ-HASDFIIEQVRKYPKQVTLITVASQTNLALAIMKDPEIVS 143
Query: 121 NIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHS 180
++ + +MGGA+ P + P AE NI++DP AA V S
Sbjct: 144 LVKRVVIMGGAVT---------------------VPGNVTPVAEANIYTDPEAAELVFQS 182
Query: 181 GIPVTIIPLDAT-KTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPFHEAYC 239
GIP+T++ LD T +T+ E+ + R T ++ + D ++ P+
Sbjct: 183 GIPITLVGLDVTMQTLLTKEH--TQMWRESGTPVGKFLASCSEFYMDAYAKINPYLGGCA 240
Query: 240 MWDSFMAGVAL 250
+ D GV +
Sbjct: 241 LHDPLAVGVVI 251
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 96/244 (39%), Gaps = 62/244 (25%)
Query: 407 KPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDD 466
K V+ D+D D LAL Y ++ P +++ G+ S T + +L ++G D
Sbjct: 2 KYVILDVDTGIDDALALAYAIQSPA--LHVLGLTTSFGNHVVDITTENTLKVLEILGATD 59
Query: 467 IPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAE 526
IPV G + L RSP +
Sbjct: 60 IPVA---------------------------------------KGAGKPLLRSPLK---A 77
Query: 527 NSVRFGASQDNDDPELRQP--LAVDVWKS--IVESIEPGSK-ITILTNGPLTNLA-QIIG 580
N+ + L QP A+D S I+E + K +T++T TNLA I+
Sbjct: 78 NATHIHGEDGIGNTYLPQPKVTAIDQHASDFIIEQVRKYPKQVTLITVASQTNLALAIMK 137
Query: 581 LQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPS--SKYAEFNMFLDPLAAKAVFESKLEIK 638
S+++ V I+GG TVP + AE N++ DP AA+ VF+S + I
Sbjct: 138 DPEIVSLVKRVVIMGG----------AVTVPGNVTPVAEANIYTDPEAAELVFQSGIPIT 187
Query: 639 LIPL 642
L+ L
Sbjct: 188 LVGL 191
>gi|289449638|ref|YP_003474606.1| putative cytidine/uridine-specific hydrolase [Clostridiales
genomosp. BVAB3 str. UPII9-5]
gi|289184185|gb|ADC90610.1| putative cytidine/uridine-specific hydrolase [Clostridiales
genomosp. BVAB3 str. UPII9-5]
Length = 328
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 59/133 (44%), Gaps = 23/133 (17%)
Query: 61 NYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKK 120
+ GL LP+ + +PL P ++ A IT+ G TN A FL+ P LK
Sbjct: 88 DSGLDGIELPEPKMEISPLSAPELMAAVLRAADT-EITIVATGPLTNVATFLLLYPELKA 146
Query: 121 NIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHS 180
I I +MGG IR+ + + AEFN F DP AA V S
Sbjct: 147 KIGRIALMGGGIRNGNWTAA----------------------AEFNFFEDPEAAAIVFRS 184
Query: 181 GIPVTIIPLDATK 193
GIP+T+ LD T+
Sbjct: 185 GIPITMAGLDVTE 197
>gi|428227095|ref|YP_007111192.1| inosine/uridine-preferring nucleoside hydrolase [Geitlerinema sp.
PCC 7407]
gi|427986996|gb|AFY68140.1| Inosine/uridine-preferring nucleoside hydrolase [Geitlerinema sp.
PCC 7407]
Length = 315
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 67/148 (45%), Gaps = 35/148 (23%)
Query: 51 PVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQ----VLINAISAGP--ITVFVMGS 104
P+ YV+ GL + LP+ +QP Q LI ++ P +T+ +G
Sbjct: 75 PLETAEYVHGATGLGQVTLPEP-------QQPCQAQHGVNFLIETLTQAPEPVTLAALGP 127
Query: 105 HTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAE 164
TN AI L+ P + I I +MGGAI GN+ P AE
Sbjct: 128 LTNLAIALIQAPQIGPKIAEIVIMGGAITH-----------------GNV-----TPVAE 165
Query: 165 FNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
FN ++DP AA VL SG P+T+I LD T
Sbjct: 166 FNFYNDPHAAQIVLSSGCPITLISLDVT 193
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 104/257 (40%), Gaps = 55/257 (21%)
Query: 407 KPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDD 466
+P++ D D D +AL+ + E ++L GI + + T ++ + G+D
Sbjct: 4 RPLIIDCDPGVDDAIALLLAIA-SREALSLLGITTVAGNVPLALTEKNARRIVTLSGQD- 61
Query: 467 IPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAE 526
IPV GC PL + ++ T G LP + A+
Sbjct: 62 IPV-----------------YAGCPRPLMRPLETAEYVHGATGLGQV-TLPEPQQPCQAQ 103
Query: 527 NSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSS 586
+ V F + +++ ++ EP +T+ GPLTNLA I L +
Sbjct: 104 HGVNF------------------LIETLTQAPEP---VTLAALGPLTNLA--IALIQAPQ 140
Query: 587 V---IQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLH 643
+ I ++ I+GG GNV V AEFN + DP AA+ V S I LI L
Sbjct: 141 IGPKIAEIVIMGGAI----THGNVTPV-----AEFNFYNDPHAAQIVLSSGCPITLISLD 191
Query: 644 MQRRVASFFKILHKLRD 660
+ R + + + LR+
Sbjct: 192 VTHRAIATPQRVAALRN 208
>gi|330810599|ref|YP_004355061.1| purine nucleosidase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|378949929|ref|YP_005207417.1| inosine-uridine preferring nucleoside hydrolase [Pseudomonas
fluorescens F113]
gi|423698246|ref|ZP_17672736.1| pyrimidine-specific ribonucleoside hydrolase RihA [Pseudomonas
fluorescens Q8r1-96]
gi|327378707|gb|AEA70057.1| putative purine nucleosidase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|359759943|gb|AEV62022.1| Inosine-uridine preferring nucleoside hydrolase [Pseudomonas
fluorescens F113]
gi|388005490|gb|EIK66757.1| pyrimidine-specific ribonucleoside hydrolase RihA [Pseudomonas
fluorescens Q8r1-96]
Length = 342
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 24/124 (19%)
Query: 79 LRQPTAQQVLINAISAG---PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSD 135
L + A LI+ + A IT+ ++G TN A+ L+ P + + I+ + +MGGA
Sbjct: 129 LAEGNAVNYLIDTLKAAKPHSITIAMLGPQTNLALALVQEPDIVQGIKEVVIMGGA---- 184
Query: 136 CFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTI 195
FN N + P AEFN+F+DP AA V SG+ +T +PLD T I
Sbjct: 185 HFNGGNIT-----------------PVAEFNLFADPQAAEVVAKSGVKLTYLPLDVTHKI 227
Query: 196 PVSE 199
SE
Sbjct: 228 LTSE 231
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 101/240 (42%), Gaps = 46/240 (19%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
++ D D A D +AL++ L P EL +++ + + T GR+D+P
Sbjct: 34 LIIDTDPGADDVVALLFALASPEEL-HIRALTTVAGNVRLDKTSRNARLAREWAGREDVP 92
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V G PK P + YA+ I G L T++ P++ AE +
Sbjct: 93 VYAG--------APK-PLMRTPIYAENIHGKEG--LSGVTVH--------EPKKGLAEGN 133
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVI 588
AV+ +++ +P S ITI GP TNLA + L ++
Sbjct: 134 ------------------AVNYLIDTLKAAKPHS-ITIAMLGPQTNLA--LALVQEPDIV 172
Query: 589 QDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
Q + V G GN+ V AEFN+F DP AA+ V +S +++ +PL + ++
Sbjct: 173 QGIKEVVIMGGAHFNGGNITPV-----AEFNLFADPQAAEVVAKSGVKLTYLPLDVTHKI 227
>gi|338730991|ref|YP_004660383.1| ribosylpyrimidine nucleosidase [Thermotoga thermarum DSM 5069]
gi|335365342|gb|AEH51287.1| Ribosylpyrimidine nucleosidase [Thermotoga thermarum DSM 5069]
Length = 306
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 68/151 (45%), Gaps = 29/151 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFV-MGSHTNFAIFLMNNP 116
++ + GL A LPQ R L A + + V V G TN A+F++ P
Sbjct: 78 IHGSTGLDGAQLPQPKRSIESLH---AVDFIAQMLEKYDDVVLVPTGPLTNVALFMLKYP 134
Query: 117 HLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYT 176
HL K I I +MGG I + GN+ P AEFNIF DP AA
Sbjct: 135 HLVKKISSIVLMGGGI-----------------AFGNI-----TPVAEFNIFVDPEAAKI 172
Query: 177 VLHSGIPVTIIPLDATKTIPVSENFFVEFER 207
V +SG+P+ + PLD T I ++ E ER
Sbjct: 173 VFNSGVPIVMAPLDLTHQIIATDR---EVER 200
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 10/107 (9%)
Query: 554 IVESIEPGSKITILTNGPLTNLAQ-IIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPS 612
I + +E + ++ GPLTN+A ++ + I + ++GG GN+ V
Sbjct: 105 IAQMLEKYDDVVLVPTGPLTNVALFMLKYPHLVKKISSIVLMGGGIAF----GNITPV-- 158
Query: 613 SKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLR 659
AEFN+F+DP AAK VF S + I + PL + ++ + + + +LR
Sbjct: 159 ---AEFNIFVDPEAAKIVFNSGVPIVMAPLDLTHQIIATDREVERLR 202
>gi|296270550|ref|YP_003653182.1| ribosylpyrimidine nucleosidase [Thermobispora bispora DSM 43833]
gi|296093337|gb|ADG89289.1| Ribosylpyrimidine nucleosidase [Thermobispora bispora DSM 43833]
Length = 313
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 63/146 (43%), Gaps = 28/146 (19%)
Query: 96 PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY 155
P+T+ +G TN A L +P I + VMGG+I GN
Sbjct: 118 PVTIIAVGPLTNVATLLRRHPEDASRIRELVVMGGSIER-----------------GN-- 158
Query: 156 PDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQ 215
PYAEFN++ DP AA VL SG+PVT+ L+ T V+ + F R T +
Sbjct: 159 ---HTPYAEFNVYVDPEAAAEVLASGLPVTLHGLNVTHQALVTPDVVDRF-RGLGTRLGE 214
Query: 216 YCFQSLKMI----RDTWS-GSPPFHE 236
C + + R W +PP H+
Sbjct: 215 VCAELMTFFGGTYRRLWGFEAPPLHD 240
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 69/131 (52%), Gaps = 21/131 (16%)
Query: 538 DDPELRQPL-------AVDVWKSIV-ESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVI 588
D PEL P AVD+ I+ ES EP +TI+ GPLTN+A ++ +S I
Sbjct: 88 DGPELGPPTVPLAGEHAVDLMHRILRESPEP---VTIIAVGPLTNVATLLRRHPEDASRI 144
Query: 589 QDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
+++ ++GG+ E+GN + YAEFN+++DP AA V S L + L L++ +
Sbjct: 145 RELVVMGGSI----ERGN-----HTPYAEFNVYVDPEAAAEVLASGLPVTLHGLNVTHQA 195
Query: 649 ASFFKILHKLR 659
++ + R
Sbjct: 196 LVTPDVVDRFR 206
>gi|119945596|ref|YP_943276.1| inosine/uridine-preferring nucleoside hydrolase [Psychromonas
ingrahamii 37]
gi|119864200|gb|ABM03677.1| Inosine/uridine-preferring nucleoside hydrolase [Psychromonas
ingrahamii 37]
Length = 747
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 110/254 (43%), Gaps = 61/254 (24%)
Query: 407 KPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWA-TSATVDVVYDLLHMMGRD 465
K ++ D DM D LA++ L+K P N+ GI V+ G V++ L+ + +
Sbjct: 8 KNLIIDTDMGWDDVLAILLLIKNPN--YNILGITVTGCGETHLEQGVELALQLVTLGNQP 65
Query: 466 DIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDS-DTLYGLARDLPRSPRRYT 524
DI V G G+ N +FP F D D GL LP +
Sbjct: 66 DICVCAG-ADKTGQYNHQFPE---------------SFRDMMDDACGLRDKLPAAESTKD 109
Query: 525 AENSVRFGASQDNDDPELRQPLAVDVWKSIVESI-EPGSKITILTNGPLTNLAQIIGLQN 583
N+ W+ I + + E ++ITIL+ G LTN+ ++I +Q
Sbjct: 110 QRNA----------------------WEFINDCLNEQENQITILSLGGLTNIQKLIEMQP 147
Query: 584 SSSV--IQDVYIVGGNKGQDNEKGNVFTV-------------PSSKYAEFNMFLDPLAAK 628
++ I+ + ++GG D GNV + S+ YAE+N+FLDP AA+
Sbjct: 148 FPALENIERIVVMGGAIDVD---GNVAALNNSNKYWDQGTEYASNTYAEWNIFLDPKAAQ 204
Query: 629 AVFESKLEIKLIPL 642
F S + IKL+PL
Sbjct: 205 VTFNSGIPIKLVPL 218
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
Query: 97 ITVFVMGSHTNFAIFLMNNPH-LKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY 155
IT+ +G TN + P +NIE I VMGGAI D + ++ ++ D G Y
Sbjct: 128 ITILSLGGLTNIQKLIEMQPFPALENIERIVVMGGAIDVDGNVAALNNSNKYWDQ-GTEY 186
Query: 156 PDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFF 202
SN YAE+NIF DP AA +SGIP+ ++PLDA + + ++
Sbjct: 187 A--SNTYAEWNIFLDPKAAQVTFNSGIPIKLVPLDACDYAILDKTYY 231
>gi|388544352|ref|ZP_10147640.1| inosine-uridine preferring nucleoside hydrolase [Pseudomonas sp.
M47T1]
gi|388277535|gb|EIK97109.1| inosine-uridine preferring nucleoside hydrolase [Pseudomonas sp.
M47T1]
Length = 332
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Query: 92 ISAGPITVFVMGSHTNFAIFLMNNPHLK--KNIEHIYVMGGAIRSDCFNSTNSSQSEQCD 149
+S PITV +G T FA L P IE I M GA+ D + + + D
Sbjct: 119 VSTTPITVLSLGGFTTFAKLLALKPAASDLAKIERIVAMAGAVHVDGNVAALNGALPEWD 178
Query: 150 SIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTI 195
G+ Y SN YAE+N+F DP AA V S +P+T++PLDA +
Sbjct: 179 Q-GSRY--RSNHYAEWNVFVDPLAADLVFKSDLPLTLVPLDACNQV 221
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 111/261 (42%), Gaps = 57/261 (21%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLP-VELINLK--GILVSSTGWATSATVDVVYDLLHM 461
M K V D DM D L++ YL+K P VE++ L G ++ GW T H+
Sbjct: 1 MQKKVFIDSDMGWDDVLSIAYLMKDPSVEIVGLSVTGCGETNLGWGTLIA-------QHL 53
Query: 462 MGRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPR 521
+G +GE + +PL G +D L+ P+ +
Sbjct: 54 LG-------------IGE-------------HQHVPLARG----TDVPLSLSNVFPQPFK 83
Query: 522 RYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSK-ITILTNGPLTNLAQIIG 580
+ G+ P + A W+ + ++++ + IT+L+ G T A+++
Sbjct: 84 NDMNDLMGLLGSLNPAHLPGVS---AKPGWELLHDTLKVSTTPITVLSLGGFTTFAKLLA 140
Query: 581 LQNSSSVIQDVYIVGGNKGQDNEKGNVFTV-------------PSSKYAEFNMFLDPLAA 627
L+ ++S + + + G + GNV + S+ YAE+N+F+DPLAA
Sbjct: 141 LKPAASDLAKIERIVAMAGAVHVDGNVAALNGALPEWDQGSRYRSNHYAEWNVFVDPLAA 200
Query: 628 KAVFESKLEIKLIPLHMQRRV 648
VF+S L + L+PL +V
Sbjct: 201 DLVFKSDLPLTLVPLDACNQV 221
>gi|421871186|ref|ZP_16302808.1| inosine-uridine preferring nucleoside hydrolase family protein
[Brevibacillus laterosporus GI-9]
gi|372459813|emb|CCF12357.1| inosine-uridine preferring nucleoside hydrolase family protein
[Brevibacillus laterosporus GI-9]
Length = 315
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 29/191 (15%)
Query: 63 GLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKK 120
G+ +LPQ K + Q A +I + P +T+ + S TN A+ +M +P +
Sbjct: 87 GIGNTYLPQ--PKATAIDQ-HAADFIIEQVRKYPKQVTLITVASQTNLALAIMKDPEIVS 143
Query: 121 NIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHS 180
++ + +MGGA+ P + P AE NI++DP AA V S
Sbjct: 144 LVKRVVIMGGAVT---------------------VPGNVTPVAEANIYTDPEAAELVFQS 182
Query: 181 GIPVTIIPLDAT-KTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPFHEAYC 239
GIP+T++ LD T +T+ E+ + R T ++ + D ++ P+
Sbjct: 183 GIPITLVGLDVTMQTLLTKEH--TQMWRESGTPVGKFLASCSEFYMDAYAKINPYLGGCA 240
Query: 240 MWDSFMAGVAL 250
+ D GV +
Sbjct: 241 LHDPLAVGVVI 251
>gi|383814890|ref|ZP_09970308.1| ribosylpyrimidine nucleosidase [Serratia sp. M24T3]
gi|383296382|gb|EIC84698.1| ribosylpyrimidine nucleosidase [Serratia sp. M24T3]
Length = 307
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 93/219 (42%), Gaps = 37/219 (16%)
Query: 53 GQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNFAI 110
G V+ N GL LP+ G L+ A +I+ + A P +T+ +G TN A+
Sbjct: 78 GWESKVHGNDGLGNVSLPEPGFG---LQTQHAVDYIIHTVHAEPGQVTLCPIGPMTNIAL 134
Query: 111 FLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSD 170
++ +P + I+ + MGGA F N S P AEFNI+ D
Sbjct: 135 AIIKDPSIVPKIKQLVFMGGA----AFCQGNVS-----------------PVAEFNIYVD 173
Query: 171 PFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSG 230
P+AA VL +GIP + LD T ++ + E ++ E + M+R +
Sbjct: 174 PWAAQVVLSAGIPQVMFGLDVTLQAKINAPYLEELQQVSPLLET-----ACAMMRSYGAS 228
Query: 231 SPPFHE----AYCMWDSFMAGVA--LSIMLNSSSHNGEN 263
P H+ A+ + + GVA +S+ H G+
Sbjct: 229 DPCLHDPCVIAWLINPNLFTGVAGRVSVSYQDDIHRGQT 267
>gi|424923962|ref|ZP_18347323.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas fluorescens
R124]
gi|404305122|gb|EJZ59084.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas fluorescens
R124]
Length = 342
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 21/103 (20%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
IT+ ++G TN A+ L+ P + I+ + +MGGA FN N +
Sbjct: 150 ITIAMLGPQTNLALALIQEPEIVNGIKEVVIMGGA----HFNGGNIT------------- 192
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSE 199
P AEFN+F+DP AA VL SG+ +T +PLD T I S+
Sbjct: 193 ----PVAEFNLFADPQAAEVVLKSGVKLTYLPLDVTHKILTSD 231
Score = 46.2 bits (108), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 104/242 (42%), Gaps = 50/242 (20%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
++ D D A D +AL++ L P EL N++ + + T GR+D+P
Sbjct: 34 LIIDTDPGADDVVALLFALASPDEL-NIRALTTVAGNVRLDKTSRNARLAREWAGREDVP 92
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V G PK P + YA+ I G L T++ P++ AE +
Sbjct: 93 VYAG--------APK-PLMRTPIYAENIHGKEG--LSGVTVH--------EPKKGLAEGN 133
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSV- 587
AV+ ++ +P S ITI GP TNLA + +Q V
Sbjct: 134 ------------------AVNYLIDTLKKAKPHS-ITIAMLGPQTNLALAL-IQEPEIVN 173
Query: 588 -IQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQR 646
I++V I+GG GN+ V AEFN+F DP AA+ V +S +++ +PL +
Sbjct: 174 GIKEVVIMGG---AHFNGGNITPV-----AEFNLFADPQAAEVVLKSGVKLTYLPLDVTH 225
Query: 647 RV 648
++
Sbjct: 226 KI 227
>gi|358052129|ref|ZP_09146061.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
simiae CCM 7213]
gi|357258390|gb|EHJ08515.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
simiae CCM 7213]
Length = 313
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 94/247 (38%), Gaps = 64/247 (25%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQRLYVNT 60
+M RDDI V VG +P+I + A ++
Sbjct: 56 IMGRDDIDVAVGAN----------------RPLIKEAAFAA---------------EIHG 84
Query: 61 NYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHL 118
+ GL LP K PL+Q A V+IN ++ P +T+ G TN A L+ P +
Sbjct: 85 DSGLDGPTLPDKPAK-EPLKQAAAD-VIINHVTTSPEPVTIVATGPLTNVATALIRRPDI 142
Query: 119 KKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVL 178
NI I +MGG + GN P AEFNI+ D AA V
Sbjct: 143 ADNIASITLMGGG------------------TFGNW-----TPTAEFNIWVDAEAAKRVF 179
Query: 179 HSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWS-----GSPP 233
SGI + + LD T + ++ F N AQ+ + L+ + T+ P
Sbjct: 180 DSGIRINVFGLDVTHQVLATDQVIERFSHIDNDV-AQFVVELLRFFKSTYKKHFDMDGGP 238
Query: 234 FHEAYCM 240
H+A +
Sbjct: 239 IHDACTI 245
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 49/203 (24%)
Query: 457 DLLHMMGRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDL 516
++L +MGRDDI V +G P I +A I SG LD TL
Sbjct: 52 NVLDIMGRDDIDVAVG---------ANRPLIKEAAFAAEIHGDSG--LDGPTL------- 93
Query: 517 PRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLA 576
P P + +P L+Q A + + S EP +TI+ GPLTN+A
Sbjct: 94 PDKPAK----------------EP-LKQAAADVIINHVTTSPEP---VTIVATGPLTNVA 133
Query: 577 Q-IIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
+I + + I + ++GG GN + AEFN+++D AAK VF+S +
Sbjct: 134 TALIRRPDIADNIASITLMGGGTF-----GN-----WTPTAEFNIWVDAEAAKRVFDSGI 183
Query: 636 EIKLIPLHMQRRVASFFKILHKL 658
I + L + +V + +++ +
Sbjct: 184 RINVFGLDVTHQVLATDQVIERF 206
>gi|117617956|ref|YP_857454.1| inosine-uridine preferring nucleoside hydrolase superfamily protein
[Aeromonas hydrophila subsp. hydrophila ATCC 7966]
gi|117559363|gb|ABK36311.1| inosine-uridine preferring nucleoside hydrolase superfamily
[Aeromonas hydrophila subsp. hydrophila ATCC 7966]
Length = 322
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 87/172 (50%), Gaps = 23/172 (13%)
Query: 504 LDSDTLYGLARDLPRSPRRYTAENSVRFGASQDNDDPELRQPLAVD---VWKSIVESIE- 559
+ +D G A L R P +V G S D LA+D W+ IVE+++
Sbjct: 58 MKADVAQGAAAPLRREP---VGPTTVVHGPSGFGDVTAGEVTLALDPRPAWQYIVEAVKA 114
Query: 560 -PGSKITILTNGPLTNLAQIIGLQNS---SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKY 615
PG +IT++T GPLTNLA + LQ + + +++ V ++GG G + +GNV + Y
Sbjct: 115 APG-EITLVTIGPLTNLA--LALQEAPEITGLVKQVVVMGGAFGVNGHRGNV-----TPY 166
Query: 616 AEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFK--ILHKLRDRKKTP 665
AE N+ DP AA VF + + +I L + ++ SFF L LRD P
Sbjct: 167 AEANIHDDPDAADRVFTADWPVVIIGLDVTQQ--SFFSSAYLDALRDDAGEP 216
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 57/121 (47%), Gaps = 25/121 (20%)
Query: 84 AQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTN 141
A Q ++ A+ A P IT+ +G TN A+ L P + ++ + VMGGA N
Sbjct: 104 AWQYIVEAVKAAPGEITLVTIGPLTNLALALQEAPEITGLVKQVVVMGGAF------GVN 157
Query: 142 SSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENF 201
+ GN+ PYAE NI DP AA V + PV II LD T+ ++F
Sbjct: 158 GHR-------GNV-----TPYAEANIHDDPDAADRVFTADWPVVIIGLDVTQ-----QSF 200
Query: 202 F 202
F
Sbjct: 201 F 201
>gi|423123972|ref|ZP_17111651.1| pyrimidine-specific ribonucleoside hydrolase rihA [Klebsiella
oxytoca 10-5250]
gi|376401059|gb|EHT13669.1| pyrimidine-specific ribonucleoside hydrolase rihA [Klebsiella
oxytoca 10-5250]
Length = 311
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 68/155 (43%), Gaps = 27/155 (17%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ G + TA +++ N + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPEPGFAA---QSCTAVELMANILRDSAEPVTIVATGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I+ I +MGGA+ +GN P EFNI+ DP AA
Sbjct: 138 PELHAKIDRIVIMGGAM-----------------VLGNW-----QPAVEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQN 210
V SGIPV + LD T + F R N
Sbjct: 176 IVFQSGIPVVMAGLDVTHKAQIHVEDIERFRRIGN 210
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 111/273 (40%), Gaps = 56/273 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M PV+ D D D +AL+ L P +++K + S+ T+ V +L ++ R
Sbjct: 1 MALPVIIDCDPGHDDAIALVLALASPE--LDVKAVTSSAGNQTPDKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G + P + +D ++G + D P P
Sbjct: 59 PDIPV------AGGALKPLM----------------RELIIADNVHGESGLDGPALPEPG 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIV-ESIEPGSKITILTNGPLTNLAQIIGLQ 582
A S AV++ +I+ +S EP +TI+ GP TN+A ++
Sbjct: 97 FAAQSCT----------------AVELMANILRDSAEP---VTIVATGPQTNVALLLNSH 137
Query: 583 NS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
+ I + I+GG N + V EFN+++DP AA+ VF+S + + +
Sbjct: 138 PELHAKIDRIVIMGGAMVLGNWQPAV---------EFNIYVDPEAAEIVFQSGIPVVMAG 188
Query: 642 LHMQRRVASFFKILHKLRDRKKTPESVFSQRLL 674
L + + + + + R R P S LL
Sbjct: 189 LDVTHKAQIHVEDIERFR-RIGNPISTIVAELL 220
>gi|326385807|ref|ZP_08207436.1| Pyrimidine-specific ribonucleoside hydrolase [Novosphingobium
nitrogenifigens DSM 19370]
gi|326209786|gb|EGD60574.1| Pyrimidine-specific ribonucleoside hydrolase [Novosphingobium
nitrogenifigens DSM 19370]
Length = 321
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 23/131 (17%)
Query: 78 PLRQPTAQQVLINAISAG--PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSD 135
PL+ A L+ + A PIT+ G TN A+ L +P + + IE I +MGGA+R
Sbjct: 100 PLQPLHAVDFLVETLLATDEPITLVATGPLTNLALALARDPGIARGIERIVLMGGAMRE- 158
Query: 136 CFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTI 195
GN+ P AEFN+ +DP AA VL SG+P+ ++ LD T +
Sbjct: 159 ---------------AGNI-----TPCAEFNMRADPHAADMVLRSGVPIVMLGLDVTHEL 198
Query: 196 PVSENFFVEFE 206
V+ +
Sbjct: 199 LVTRTRLARMK 209
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 12/101 (11%)
Query: 544 QPL-AVD-VWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQD 601
QPL AVD + ++++ + EP IT++ GPLTNLA + L + + + + G
Sbjct: 102 QPLHAVDFLVETLLATDEP---ITLVATGPLTNLA--LALARDPGIARGIERIVLMGGAM 156
Query: 602 NEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
E GN+ + AEFNM DP AA V S + I ++ L
Sbjct: 157 REAGNI-----TPCAEFNMRADPHAADMVLRSGVPIVMLGL 192
>gi|335045521|ref|ZP_08538544.1| cytidine/uridine-specific hydrolase [Oribacterium sp. oral taxon
108 str. F0425]
gi|333759307|gb|EGL36864.1| cytidine/uridine-specific hydrolase [Oribacterium sp. oral taxon
108 str. F0425]
Length = 341
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 69/138 (50%), Gaps = 28/138 (20%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ G +AP+ + +A +++ + S IT+ +G TN A L+
Sbjct: 107 VHGESGLEGPVLPENG--FAPV-EISALKLMEKILEESEEKITLVGIGPLTNIAQLLITR 163
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P LK+ IE IY+MGG +IGN P AE+NIF+DP AA
Sbjct: 164 PELKQKIEEIYIMGGG------------------TIGNW-----TPAAEYNIFADPEAAK 200
Query: 176 TVLHSGIPVTIIPLDATK 193
V +S +P+ + LD T+
Sbjct: 201 VVFNSELPIVMAGLDVTQ 218
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 57/102 (55%), Gaps = 13/102 (12%)
Query: 547 AVDVWKSIVESIEPGSKITILTNGPLTNLAQI-IGLQNSSSVIQDVYIVGGNKGQDNEKG 605
A+ + + I+E E KIT++ GPLTN+AQ+ I I+++YI+GG G
Sbjct: 130 ALKLMEKILE--ESEEKITLVGIGPLTNIAQLLITRPELKQKIEEIYIMGGGT-----IG 182
Query: 606 NVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
N + AE+N+F DP AAK VF S+L I + L + ++
Sbjct: 183 N-----WTPAAEYNIFADPEAAKVVFNSELPIVMAGLDVTQK 219
>gi|357385302|ref|YP_004900026.1| inosine-uridine preferring nucleoside hydrolase [Pelagibacterium
halotolerans B2]
gi|351593939|gb|AEQ52276.1| inosine-uridine preferring nucleoside hydrolase [Pelagibacterium
halotolerans B2]
Length = 313
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
+T+ +G TN A+ L+ P + IE I +MGG F N +
Sbjct: 121 VTLCALGPLTNLAMALVKAPDIAPRIEEIVLMGGGY----FEGGNIT------------- 163
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK----TIPVSENFFVEFERRQNTY 212
P AEFNIF DP AA TVL G P+T++PLD T T E F R +
Sbjct: 164 ----PAAEFNIFVDPEAAQTVLKCGAPITMMPLDVTHQMIGTPERIEAFRAIGNRSGDAV 219
Query: 213 EAQYCF-QSLKMIRDTWSGSP---PFHEAYCMWDSFMAGVALSIMLNSSS 258
A F + + + W G+P P AY + +G ++ + +S
Sbjct: 220 AAMLGFSERFDLEKYGWPGAPLHDPCVTAYMIAPKMFSGRLCNVEIECAS 269
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 102/246 (41%), Gaps = 50/246 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M + ++ D D D +A++ L P E+ L GI+ + + ++ + GR
Sbjct: 1 MARKIIIDTDPGQDDAVAILLALASPEEIETL-GIVAVAGNVGLAQNAKNALKVVELSGR 59
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGL-ARDLPRSPRRY 523
D+PV GC L + + T GL DLP R
Sbjct: 60 RDVPV-----------------YAGCPRPIMRELVTAEHVHGQT--GLDGPDLPEPKLRL 100
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQ-IIGLQ 582
+++ V F S LR+ EP +T+ GPLTNLA ++
Sbjct: 101 ESQHGVDFIIST------LRR--------------EPEKTVTLCALGPLTNLAMALVKAP 140
Query: 583 NSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+ + I+++ ++GG E GN+ + AEFN+F+DP AA+ V + I ++PL
Sbjct: 141 DIAPRIEEIVLMGGGY---FEGGNI-----TPAAEFNIFVDPEAAQTVLKCGAPITMMPL 192
Query: 643 HMQRRV 648
+ ++
Sbjct: 193 DVTHQM 198
>gi|325970762|ref|YP_004246953.1| ribosylpyrimidine nucleosidase [Sphaerochaeta globus str. Buddy]
gi|324026000|gb|ADY12759.1| Ribosylpyrimidine nucleosidase [Sphaerochaeta globus str. Buddy]
Length = 305
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 34/179 (18%)
Query: 73 GRKYAPLRQPTAQ-----QVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHI 125
G +AP + AQ + LI + A P +++ +G T+ A+ +P + + + I
Sbjct: 87 GPVFAPRQFQQAQDKDGIEELIKLVKANPHQLSIVSVGPLTDLALAFEQDPSVARLCKQI 146
Query: 126 YVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVT 185
+MGG+ F+ N ++S AEFN F+DP AA V SG +
Sbjct: 147 IIMGGS-----FSRGNVTES-----------------AEFNTFADPEAAERVFSSGAKMV 184
Query: 186 IIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWS----GSPPFHEAYCM 240
+ PLD T+ + +S N +F+ R+ A +C ++ ++ G P H+ C+
Sbjct: 185 LFPLDCTRQVTLSRNRLSDFQTRKGLSNAVFC-ACMESYTANYTKRGQGEPQMHDPLCV 242
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 58/111 (52%), Gaps = 14/111 (12%)
Query: 563 KITILTNGPLTNLAQIIGLQNSSSV---IQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFN 619
+++I++ GPLT+LA + + SV + + I+GG+ +GNV ++ AEFN
Sbjct: 117 QLSIVSVGPLTDLA--LAFEQDPSVARLCKQIIIMGGS----FSRGNV-----TESAEFN 165
Query: 620 MFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFS 670
F DP AA+ VF S ++ L PL R+V L + RK +VF
Sbjct: 166 TFADPEAAERVFSSGAKMVLFPLDCTRQVTLSRNRLSDFQTRKGLSNAVFC 216
>gi|398977774|ref|ZP_10687322.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas sp. GM25]
gi|398137543|gb|EJM26591.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas sp. GM25]
Length = 342
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
IT+ ++G TN A+ L+ P + + I+ + +MGGA FN N +
Sbjct: 150 ITIAMLGPQTNLALALIQEPEIVQGIKEVVIMGGA----HFNGGNIT------------- 192
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSE 199
P AEFN+++DP AA VL SG+ +T +PLD T I S+
Sbjct: 193 ----PVAEFNLYADPQAAEVVLKSGVKLTYLPLDVTHKILTSD 231
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 100/240 (41%), Gaps = 46/240 (19%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
++ D D A D +AL++ L P EL N++ + + T GR++IP
Sbjct: 34 LIIDTDPGADDVVALLFALASPEEL-NIRALTTVAGNVRLDKTSRNARLAREWAGREEIP 92
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V G PK P + YA+ I G L G+A P+
Sbjct: 93 VYAG--------APK-PLMRTPIYAENIHGKEG-------LSGVAVHEPKK--------- 127
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVI 588
G ++ N AV+ ++ +P S ITI GP TNLA + L ++
Sbjct: 128 ---GLAEGN---------AVNYLIDTLKKAKPHS-ITIAMLGPQTNLA--LALIQEPEIV 172
Query: 589 QDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
Q + V G GN+ V AEFN++ DP AA+ V +S +++ +PL + ++
Sbjct: 173 QGIKEVVIMGGAHFNGGNITPV-----AEFNLYADPQAAEVVLKSGVKLTYLPLDVTHKI 227
>gi|254414833|ref|ZP_05028597.1| Inosine-uridine preferring nucleoside hydrolase superfamily
[Coleofasciculus chthonoplastes PCC 7420]
gi|196178322|gb|EDX73322.1| Inosine-uridine preferring nucleoside hydrolase superfamily
[Coleofasciculus chthonoplastes PCC 7420]
Length = 307
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 66/145 (45%), Gaps = 15/145 (10%)
Query: 68 FLPQGGRKYAPLRQPTAQQVLINAISAG--PITVFVMGSHTNFAIFLMNNPHLKKNIEHI 125
L Q PL T Q+ ++ ++ P+T+ V G T A L P + IE I
Sbjct: 91 ILNQNDTIQTPLLTETGQEFIVRSLQTADQPVTLMVTGPLTTVATALNLAPDIAAKIEQI 150
Query: 126 YVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVT 185
MGGAI N +S + G+ AE+N + DP A + + + IP+
Sbjct: 151 VWMGGAIHV----PGNVEKSLEPGQDGS---------AEWNAYWDPLAVHQIWQTQIPIV 197
Query: 186 IIPLDATKTIPVSENFFVEFERRQN 210
+ PLD T T+PV+ F + ++++
Sbjct: 198 LCPLDLTNTVPVTSEFVYKLGKQRH 222
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 150/363 (41%), Gaps = 72/363 (19%)
Query: 405 MGKPVVF-DIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMG 463
M KP+V D D D+LA + L+ + + I GI+V+ V+ +L ++G
Sbjct: 1 MSKPLVLMDQDGGVDDYLATVLLMTM--DHIQPLGIVVTPADCYIQPAVNATRKILDLIG 58
Query: 464 RDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRY 523
IPV V + NP FPP+ Y
Sbjct: 59 CSHIPVAESTVRGI---NP-FPPL-----------------------------------Y 79
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKS-IVESIEPGSK-ITILTNGPLTNLAQIIGL 581
+ + N + ++ PL + + IV S++ + +T++ GPLT +A + L
Sbjct: 80 RRDAFIVDHLPILNQNDTIQTPLLTETGQEFIVRSLQTADQPVTLMVTGPLTTVATALNL 139
Query: 582 QN--SSSVIQDVYI-----VGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESK 634
++ + Q V++ V GN + E G AE+N + DPLA +++++
Sbjct: 140 APDIAAKIEQIVWMGGAIHVPGNVEKSLEPGQ------DGSAEWNAYWDPLAVHQIWQTQ 193
Query: 635 LEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFL 694
+ I L PL + V + ++KL ++ P S + + L+ Q D +
Sbjct: 194 IPIVLCPLDLTNTVPVTSEFVYKLGKQRHHPISDLAGQCY-ALVIPQ---------DYYF 243
Query: 695 GEVLGAVILGGNPHLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYY 754
+VL L +P T++ +I G S G+I V + GK ++VL++++ YY
Sbjct: 244 WDVLATTYL-AHPEFF-TWQDWETTVIPQG--SSQGRIQV-EAGGKRIRVLDTVDKTEYY 298
Query: 755 DHF 757
+
Sbjct: 299 SYL 301
>gi|332707183|ref|ZP_08427237.1| putative exosortase, PEP-CTERM interaction domain protein [Moorea
producens 3L]
gi|332354044|gb|EGJ33530.1| putative exosortase, PEP-CTERM interaction domain protein [Moorea
producens 3L]
Length = 400
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 79/146 (54%), Gaps = 12/146 (8%)
Query: 554 IVESIEPG-SKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPS 612
IVE+++ S + IL GPLTN+A+ + L ++++++ +V G GN+ +P
Sbjct: 149 IVETVKDSPSPVAILATGPLTNIAEALRLD--PTIVENISVVQIMGGAVFVPGNLPVLPD 206
Query: 613 SKY-----AEFNMFLDPLAAKAVFES---KLEIKLIPLHMQRRVASFFKILHKLRDRKKT 664
+ AEFN+++DP+AA+ VFE+ L+I+L PL ++ F + T
Sbjct: 207 PPFSTNTVAEFNIWIDPVAAQEVFEAGNNGLKIELTPLDATNQI-EFTREDQAAWIETGT 265
Query: 665 PESVFSQRLLQGLMTLQQSHHSYHHV 690
PES+ + LL +T+ QS + + V
Sbjct: 266 PESLIAAELLDFALTVIQSDNDPNPV 291
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 51/111 (45%), Gaps = 24/111 (21%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
S P+ + G TN A L +P + +NI + +MGGA+ G
Sbjct: 156 SPSPVAILATGPLTNIAEALRLDPTIVENISVVQIMGGAVFVP----------------G 199
Query: 153 NL--YPD---DSNPYAEFNIFSDPFAAYTVLHS---GIPVTIIPLDATKTI 195
NL PD +N AEFNI+ DP AA V + G+ + + PLDAT I
Sbjct: 200 NLPVLPDPPFSTNTVAEFNIWIDPVAAQEVFEAGNNGLKIELTPLDATNQI 250
>gi|289808430|ref|ZP_06539059.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 206
Score = 63.5 bits (153), Expect = 5e-07, Method: Composition-based stats.
Identities = 44/128 (34%), Positives = 60/128 (46%), Gaps = 33/128 (25%)
Query: 67 AFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEH 124
+F PQ G TA +++ + SA P+T+ G TN A+ L ++P L I
Sbjct: 96 SFAPQSG---------TAVELMAKTLRESAQPVTIVSTGPQTNVALLLNSHPELHTKIAR 146
Query: 125 IYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPV 184
I +MGGA+ ++GN P AEFNI+ DP AA V SGIPV
Sbjct: 147 IVIMGGAM-----------------ALGNW-----TPAAEFNIYVDPEAAEIVFQSGIPV 184
Query: 185 TIIPLDAT 192
+ LD T
Sbjct: 185 VMAGLDVT 192
Score = 47.8 bits (112), Expect = 0.025, Method: Composition-based stats.
Identities = 63/245 (25%), Positives = 104/245 (42%), Gaps = 53/245 (21%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + +K I S+ T+ V +L ++ R
Sbjct: 1 MALPIIIDCDPGHDDAIALVLALASPE--LEVKAITSSAGNQTPEKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + + +D ++G + D P P
Sbjct: 59 PDIPV------AGGAVKPLMREL----------------IIADNVHGESGLDGPALP--- 93
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
E S A Q EL + K++ ES +P +TI++ GP TN+A ++
Sbjct: 94 --EPSF---APQSGTAVEL-------MAKTLRESAQP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+ I + I+GG N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHTKIARIVIMGGAMALGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRR 647
+ +
Sbjct: 190 DVTHK 194
>gi|77458152|ref|YP_347657.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
fluorescens Pf0-1]
gi|77382155|gb|ABA73668.1| putative inosine-uridine preferring nucleoside hydrolase
[Pseudomonas fluorescens Pf0-1]
Length = 342
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
IT+ ++G TN A+ L+ P + + I+ + +MGGA FN N +
Sbjct: 150 ITIAMLGPQTNLALALIQEPEIVQGIKEVVIMGGA----HFNGGNIT------------- 192
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSE 199
P AEFN+++DP AA VL SG+ +T +PLD T I S+
Sbjct: 193 ----PVAEFNLYADPQAAEVVLKSGVKLTYLPLDVTHKILTSD 231
Score = 45.8 bits (107), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 101/242 (41%), Gaps = 46/242 (19%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
++ D D A D +AL++ L P EL N++ + + T GR+DIP
Sbjct: 34 LIIDTDPGADDVVALLFALASPEEL-NIRALTTVAGNVRLDKTSRNARLAREWAGREDIP 92
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V G PK P + YA+ I G L T++ P++ AE +
Sbjct: 93 VYAG--------APK-PLMRTPIYAENIHGKEG--LSGVTVH--------EPKKGLAEGN 133
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVI 588
AV+ ++ +P S ITI GP TNLA + L ++
Sbjct: 134 ------------------AVNYLIDTLKKAKPHS-ITIAMLGPQTNLA--LALIQEPEIV 172
Query: 589 QDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
Q + V G GN+ V AEFN++ DP AA+ V +S +++ +PL + ++
Sbjct: 173 QGIKEVVIMGGAHFNGGNITPV-----AEFNLYADPQAAEVVLKSGVKLTYLPLDVTHKI 227
Query: 649 AS 650
+
Sbjct: 228 LT 229
>gi|377810352|ref|YP_005005573.1| non-specific ribonucleoside hydrolase rihC [Pediococcus claussenii
ATCC BAA-344]
gi|361057093|gb|AEV95897.1| non-specific ribonucleoside hydrolase rihC [Pediococcus claussenii
ATCC BAA-344]
Length = 304
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 59/121 (48%), Gaps = 26/121 (21%)
Query: 76 YAPLRQPT--AQQVLINAISA--GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGA 131
Y P P A + L N I A GPIT+ GS+TN A+ +P +K+ I I MGG+
Sbjct: 93 YEPTEIPVNNAVERLYNVIMANDGPITLVPTGSYTNVALLFKQHPDVKEKIGKIVAMGGS 152
Query: 132 IRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDA 191
I +GN+ AEFN+F+DP AA V SG+P+ ++ LD
Sbjct: 153 I-----------------GMGNM-----TSAAEFNVFTDPHAAEIVYQSGVPIVMVGLDV 190
Query: 192 T 192
T
Sbjct: 191 T 191
>gi|414870117|tpg|DAA48674.1| TPA: hypothetical protein ZEAMMB73_378734 [Zea mays]
Length = 246
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 27/181 (14%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISA--GPITVFVMGSHTNFAIFLMN 114
+V+ + G+ FLP K + +A LIN +S G ++V +G TN A+ +
Sbjct: 89 FVHGSDGIGNLFLPAPSAKKV---EESAADFLINKVSEFPGEVSVLALGPLTNVALAIKR 145
Query: 115 NPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAA 174
+P ++ I V+GGA + GN+ NP AE NI DP AA
Sbjct: 146 DPSFASKVKKIVVLGGAFFA----------------AGNV-----NPAAEANIHGDPEAA 184
Query: 175 YTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPF 234
V SG + ++ ++ T + +++ +E R A + ++ K RD + S F
Sbjct: 185 DIVFTSGADIVVVGINITTQVCLTDEDLLEL-RNSKGKHAAFLYEMCKFYRDWHAKSDGF 243
Query: 235 H 235
H
Sbjct: 244 H 244
>gi|407977205|ref|ZP_11158092.1| inosine/uridine-preferring nucleoside hydrolase [Nitratireductor
indicus C115]
gi|407427334|gb|EKF40031.1| inosine/uridine-preferring nucleoside hydrolase [Nitratireductor
indicus C115]
Length = 323
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 62/125 (49%), Gaps = 21/125 (16%)
Query: 84 AQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSS 143
A++ L A IT+ +G TN A+ L P++ + IE I +MGGA S
Sbjct: 109 AEEALKAASKGRRITICAIGPLTNIALALRLAPNVAQGIERIVMMGGAFAS--------- 159
Query: 144 QSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFV 203
+G+ P++EFN+ +DP AA V +SG+P+ ++PLD T +E F
Sbjct: 160 -------LGH-----RTPWSEFNVHADPHAAEIVWNSGVPLVLMPLDVTFQALFTEEDFR 207
Query: 204 EFERR 208
FE +
Sbjct: 208 GFEAK 212
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 104/239 (43%), Gaps = 48/239 (20%)
Query: 407 KPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDD 466
+ ++ D D D A+ L P ++L GI V + +A+V L+ + GR D
Sbjct: 4 RRIIIDTDPGVDDAAAIFLALASPE--LDLAGISVVAGNVGLAASVKNACKLVALAGRRD 61
Query: 467 IPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAE 526
+PV G A G P I + K +GS +DTL +P + A
Sbjct: 62 VPVYAG---AAG------PLIRDQVFGKYAHIGS----FADTL------VPETDHGPQAV 102
Query: 527 NSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ-NSS 585
+SVRF A + +++ G +ITI GPLTN+A + L N +
Sbjct: 103 SSVRFIAEE------------------ALKAASKGRRITICAIGPLTNIALALRLAPNVA 144
Query: 586 SVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHM 644
I+ + ++GG + + ++EFN+ DP AA+ V+ S + + L+PL +
Sbjct: 145 QGIERIVMMGGAFASLGHR--------TPWSEFNVHADPHAAEIVWNSGVPLVLMPLDV 195
>gi|451340923|ref|ZP_21911406.1| Inosine-uridine preferring nucleoside hydrolase [Amycolatopsis
azurea DSM 43854]
gi|449416299|gb|EMD22052.1| Inosine-uridine preferring nucleoside hydrolase [Amycolatopsis
azurea DSM 43854]
Length = 319
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 78/170 (45%), Gaps = 36/170 (21%)
Query: 41 AGECR---YRQAIPVGQRLYVNTNYGL--RKAFLPQGGRKYAPLRQPTAQQVLINAISAG 95
AG R Y A P G +V+ GL LP+ R PL + A ++L++ + A
Sbjct: 65 AGASRPLVYDNAKPAG---FVHGEDGLSGHAGTLPEAKR---PLDERGAVRLLVDLLEAA 118
Query: 96 --PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGN 153
P+T+ +G TN A+ L +P +++ I I +MGG + NST +
Sbjct: 119 DEPVTIAPIGPLTNIALLLAAHPEVREKIGRIVIMGGGVTKG--NSTTA----------- 165
Query: 154 LYPDDSNPYAEFNIFSDPFAAYTVLHSG-IPVTIIPLDATKTIPVSENFF 202
AEFNI+SDP AA VL G IP ++PLD T V +
Sbjct: 166 ---------AEFNIWSDPEAARRVLVDGDIPTVLVPLDITHQCSVDTGWL 206
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 101/257 (39%), Gaps = 51/257 (19%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
MG ++ D D D AL L E ++L G+ S T LL + G
Sbjct: 1 MGTKLIIDTDPGVDDAFALA--LATQSEDVDLLGVTTVFGNVPLSHTTANARRLLQLFGC 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLD-SDTLYGLARDLPRSPRRY 523
+D+PV A G P Y A P GF+ D L G A LP + R
Sbjct: 59 EDVPV------AAGASRPLV-------YDNAKP---AGFVHGEDGLSGHAGTLPEAKRPL 102
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ- 582
+VR L VD+ ++ E +TI GPLTN+A ++
Sbjct: 103 DERGAVR---------------LLVDLLEAADE------PVTIAPIGPLTNIALLLAAHP 141
Query: 583 NSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVF-ESKLEIKLIP 641
I + I+GG KGN S+ AEFN++ DP AA+ V + + L+P
Sbjct: 142 EVREKIGRIVIMGGGV----TKGN-----STTAAEFNIWSDPEAARRVLVDGDIPTVLVP 192
Query: 642 LHMQRRVASFFKILHKL 658
L + + + L KL
Sbjct: 193 LDITHQCSVDTGWLGKL 209
>gi|452953271|gb|EME58694.1| purine nucleosidase [Amycolatopsis decaplanina DSM 44594]
Length = 319
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 87/207 (42%), Gaps = 60/207 (28%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQRLYVNT 60
+ RDD+PV G +P++ Y A P G +V+
Sbjct: 55 LFGRDDVPVAAGAA----------------RPLV-----------YDNAKPAG---FVHG 84
Query: 61 NYGL--RKAFLPQGGRKYAPLRQPTAQQVLINAISAG--PITVFVMGSHTNFAIFLMNNP 116
GL LP+ R PL + A ++L++ + A P+T+ +G TN A+ L +P
Sbjct: 85 EDGLSGHAGTLPEAKR---PLDERGAVRLLVDLLEAADEPVTIAPIGPLTNIALLLAAHP 141
Query: 117 HLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYT 176
+++ I I VMGG + NST + AEFNI+SDP AA
Sbjct: 142 DIREKIGRIVVMGGGVTKG--NSTTA--------------------AEFNIWSDPEAARR 179
Query: 177 VL-HSGIPVTIIPLDATKTIPVSENFF 202
VL IP ++PLD T V ++
Sbjct: 180 VLVDEDIPTVLVPLDITHQCSVDTDWL 206
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 103/257 (40%), Gaps = 51/257 (19%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
MG ++ D D D AL L E ++L G+ S T LL + GR
Sbjct: 1 MGTKLIIDTDPGVDDAFALA--LATQSEDVDLLGVTTVFGNVPLSHTTANARRLLQLFGR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFL-DSDTLYGLARDLPRSPRRY 523
DD+PV A G P Y A P GF+ D L G A LP + R
Sbjct: 59 DDVPV------AAGAARPLV-------YDNAKP---AGFVHGEDGLSGHAGTLPEAKRPL 102
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ- 582
+VR L VD+ ++ E +TI GPLTN+A ++
Sbjct: 103 DERGAVR---------------LLVDLLEAADE------PVTIAPIGPLTNIALLLAAHP 141
Query: 583 NSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVF-ESKLEIKLIP 641
+ I + ++GG KGN S+ AEFN++ DP AA+ V + + L+P
Sbjct: 142 DIREKIGRIVVMGGGV----TKGN-----STTAAEFNIWSDPEAARRVLVDEDIPTVLVP 192
Query: 642 LHMQRRVASFFKILHKL 658
L + + + L KL
Sbjct: 193 LDITHQCSVDTDWLGKL 209
>gi|291564033|emb|CBL42849.1| Inosine-uridine nucleoside N-ribohydrolase [butyrate-producing
bacterium SS3/4]
Length = 311
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 61/128 (47%), Gaps = 25/128 (19%)
Query: 91 AISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDS 150
A G I + V G TN AI L +P LK++I +I+ MGGA ++T
Sbjct: 113 ACEHGKIELLVTGPMTNIAIALSLHPDLKEHISYIWFMGGAAVGGNVSTT---------- 162
Query: 151 IGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK---TIPVSENFFVEFER 207
AEFNI+ DP+AA V+ SGIP+T++ LD T+ +P E F
Sbjct: 163 ------------AEFNIWVDPYAAKIVIGSGIPMTMVGLDVTEKAIMLPEDEKELRGFGT 210
Query: 208 RQNTYEAQ 215
+ T+ A
Sbjct: 211 KAGTFAAD 218
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 11/114 (9%)
Query: 563 KITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMF 621
KI +L GP+TN+A + L + I ++ +GG GNV T AEFN++
Sbjct: 118 KIELLVTGPMTNIAIALSLHPDLKEHISYIWFMGGAA----VGGNVSTT-----AEFNIW 168
Query: 622 LDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQ 675
+DP AAK V S + + ++ L + + + +LR T F+ LLQ
Sbjct: 169 VDPYAAKIVIGSGIPMTMVGLDVTEKAIMLPEDEKELRGF-GTKAGTFAADLLQ 221
>gi|242373277|ref|ZP_04818851.1| possible ribosylpyrimidine nucleosidase [Staphylococcus epidermidis
M23864:W1]
gi|242348987|gb|EES40589.1| possible ribosylpyrimidine nucleosidase [Staphylococcus epidermidis
M23864:W1]
Length = 303
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 22/119 (18%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
S P+T+ +G TN AI L P + K+I+ I +MGG+ G
Sbjct: 116 SEEPVTIIAIGPLTNIAILLSTYPEVTKHIKEIVLMGGSTGR-----------------G 158
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNT 211
N+ P AEFNI+ DP AA V +SG+P+T+I LD + + +F +F+ T
Sbjct: 159 NV-----TPLAEFNIYCDPEAAQVVFNSGLPITMIGLDLAREAMFTHDFVKKFKNTNET 212
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 69/128 (53%), Gaps = 14/128 (10%)
Query: 539 DPELRQPLAVDVWKS-IVESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGG 596
+ +L AV+ K+ ++ S EP +TI+ GPLTN+A ++ + I+++ ++GG
Sbjct: 97 EKDLASTHAVEAMKTALLNSEEP---VTIIAIGPLTNIAILLSTYPEVTKHIKEIVLMGG 153
Query: 597 NKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILH 656
+ G +GNV + AEFN++ DP AA+ VF S L I +I L + R +
Sbjct: 154 STG----RGNV-----TPLAEFNIYCDPEAAQVVFNSGLPITMIGLDLAREAMFTHDFVK 204
Query: 657 KLRDRKKT 664
K ++ +T
Sbjct: 205 KFKNTNET 212
>gi|91714302|gb|ABE54228.1| Purine nucleosidase [Shewanella denitrificans OS217]
Length = 318
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 73/166 (43%), Gaps = 34/166 (20%)
Query: 51 PVGQRLYVNTNY----GLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGS 104
P+ + L + N GL LP+ G P+ TA +++ + S P+T+ G
Sbjct: 77 PLARELIIADNVHGETGLDGPTLPEPGFAAQPI---TAVELMAEKLRLSPVPVTLVPSGP 133
Query: 105 HTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAE 164
TN A+ L +P L IE I +MGGA +GN P AE
Sbjct: 134 LTNIALLLAAHPELHPKIERIVLMGGAA-----------------GVGNW-----TPAAE 171
Query: 165 FNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQN 210
FNIF DP AA V SG+P+T+ LD T V + ER +N
Sbjct: 172 FNIFVDPEAADIVFKSGLPITLCGLDVTHKAQVMAE---DIERIRN 214
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 10/98 (10%)
Query: 564 ITILTNGPLTNLAQIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFL 622
+T++ +GPLTN+A ++ I+ + ++GG G N + AEFN+F+
Sbjct: 126 VTLVPSGPLTNIALLLAAHPELHPKIERIVLMGGAAGVGN---------WTPAAEFNIFV 176
Query: 623 DPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRD 660
DP AA VF+S L I L L + + + + ++R+
Sbjct: 177 DPEAADIVFKSGLPITLCGLDVTHKAQVMAEDIERIRN 214
>gi|390449499|ref|ZP_10235104.1| ribosylpyrimidine nucleosidase [Nitratireductor aquibiodomus RA22]
gi|389663996|gb|EIM75507.1| ribosylpyrimidine nucleosidase [Nitratireductor aquibiodomus RA22]
Length = 313
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 63/139 (45%), Gaps = 27/139 (19%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISA---GPITVFVMGSHTNFAIFLM 113
+V+ GL LP+ PL++ A +I + A G IT+ +G TN A+ L
Sbjct: 82 HVHGRTGLDGPDLPE---PEMPLQEQHAVDFIIETLMAHEEGEITLCPLGPLTNIALALN 138
Query: 114 NNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFA 173
P + I I +MGG F N + P AEFNI+ DP A
Sbjct: 139 REPRIASRIREIVLMGGGF----FEGGNVT-----------------PTAEFNIYVDPHA 177
Query: 174 AYTVLHSGIPVTIIPLDAT 192
A VL SG+PV ++PLD T
Sbjct: 178 ADVVLRSGVPVVMMPLDVT 196
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 14/128 (10%)
Query: 538 DDPELRQPL----AVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVY 592
D PE PL AVD + + E G +IT+ GPLTN+A + + +S I+++
Sbjct: 93 DLPEPEMPLQEQHAVDFIIETLMAHEEG-EITLCPLGPLTNIALALNREPRIASRIREIV 151
Query: 593 IVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFF 652
++GG E GNV + AEFN+++DP AA V S + + ++PL + R +
Sbjct: 152 LMGGGF---FEGGNV-----TPTAEFNIYVDPHAADVVLRSGVPVVMMPLDVTHRALTTR 203
Query: 653 KILHKLRD 660
+ +RD
Sbjct: 204 SRIAAIRD 211
>gi|162210778|ref|YP_561951.2| ribonucleoside hydrolase 1 [Shewanella denitrificans OS217]
Length = 311
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 73/166 (43%), Gaps = 34/166 (20%)
Query: 51 PVGQRLYVNTNY----GLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGS 104
P+ + L + N GL LP+ G P+ TA +++ + S P+T+ G
Sbjct: 70 PLARELIIADNVHGETGLDGPTLPEPGFAAQPI---TAVELMAEKLRLSPVPVTLVPSGP 126
Query: 105 HTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAE 164
TN A+ L +P L IE I +MGGA +GN P AE
Sbjct: 127 LTNIALLLAAHPELHPKIERIVLMGGAA-----------------GVGNW-----TPAAE 164
Query: 165 FNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQN 210
FNIF DP AA V SG+P+T+ LD T V + ER +N
Sbjct: 165 FNIFVDPEAADIVFKSGLPITLCGLDVTHKAQVMAE---DIERIRN 207
Score = 47.0 bits (110), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 10/98 (10%)
Query: 564 ITILTNGPLTNLAQIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFL 622
+T++ +GPLTN+A ++ I+ + ++GG G N + AEFN+F+
Sbjct: 119 VTLVPSGPLTNIALLLAAHPELHPKIERIVLMGGAAGVGN---------WTPAAEFNIFV 169
Query: 623 DPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRD 660
DP AA VF+S L I L L + + + + ++R+
Sbjct: 170 DPEAADIVFKSGLPITLCGLDVTHKAQVMAEDIERIRN 207
>gi|331645808|ref|ZP_08346911.1| cytidine/uridine-specific hydrolase [Escherichia coli M605]
gi|386618106|ref|YP_006137686.1| Putative nucleoside hydrolase [Escherichia coli NA114]
gi|387828642|ref|YP_003348579.1| putative purine nucleoside hydrolase [Escherichia coli SE15]
gi|417661191|ref|ZP_12310772.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
AA86]
gi|432396552|ref|ZP_19639339.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE25]
gi|432405484|ref|ZP_19648206.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE28]
gi|432420737|ref|ZP_19663293.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE178]
gi|432498872|ref|ZP_19740650.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE216]
gi|432557643|ref|ZP_19794333.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE49]
gi|432693413|ref|ZP_19928625.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE162]
gi|432709459|ref|ZP_19944526.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE6]
gi|432722182|ref|ZP_19957107.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE17]
gi|432726725|ref|ZP_19961607.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE18]
gi|432740411|ref|ZP_19975133.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE23]
gi|432893388|ref|ZP_20105400.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE165]
gi|432917805|ref|ZP_20122288.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE173]
gi|432925111|ref|ZP_20127202.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE175]
gi|432980131|ref|ZP_20168910.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE211]
gi|432989723|ref|ZP_20178391.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE217]
gi|433095554|ref|ZP_20281767.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE139]
gi|433104763|ref|ZP_20290784.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE148]
gi|433109945|ref|ZP_20295821.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE150]
gi|281177799|dbj|BAI54129.1| putative purine nucleoside hydrolase [Escherichia coli SE15]
gi|330910409|gb|EGH38919.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
AA86]
gi|331044560|gb|EGI16687.1| cytidine/uridine-specific hydrolase [Escherichia coli M605]
gi|333968607|gb|AEG35412.1| Putative nucleoside hydrolase [Escherichia coli NA114]
gi|430917689|gb|ELC38729.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE25]
gi|430932401|gb|ELC52824.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE28]
gi|430947209|gb|ELC66916.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE178]
gi|431032021|gb|ELD44745.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE216]
gi|431094078|gb|ELD99728.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE49]
gi|431236650|gb|ELF31855.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE162]
gi|431251628|gb|ELF45635.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE6]
gi|431268205|gb|ELF59686.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE17]
gi|431275434|gb|ELF66463.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE18]
gi|431286540|gb|ELF77366.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE23]
gi|431424368|gb|ELH06464.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE165]
gi|431446679|gb|ELH27423.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE173]
gi|431448583|gb|ELH29298.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE175]
gi|431494126|gb|ELH73716.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE211]
gi|431498175|gb|ELH77389.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE217]
gi|431619610|gb|ELI88530.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE139]
gi|431631148|gb|ELI99467.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE150]
gi|431634295|gb|ELJ02546.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE148]
Length = 311
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 79/194 (40%), Gaps = 58/194 (29%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQRLYVNT 60
++NR DIPV G ++ N I +V G
Sbjct: 55 LLNRTDIPVASGAVKPLMRNLIIADNVHG------------------------------- 83
Query: 61 NYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHL 118
GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++P L
Sbjct: 84 ESGLDGPALPEPA--FAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSHPEL 140
Query: 119 KKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVL 178
I I +MGGA+ +GN P AEFNI+ DP AA V
Sbjct: 141 HSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAEIVF 178
Query: 179 HSGIPVTIIPLDAT 192
SGIPV + LD T
Sbjct: 179 QSGIPVVMAGLDVT 192
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 106/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 TDIPV------ASGAVKPLM----------------RNLIIADNVHGESGLDGPALPEPA 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVELMA-------KTLRESAEP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHVEDTERFR 206
>gi|419924421|ref|ZP_14442311.1| ribonucleoside hydrolase 1 [Escherichia coli 541-15]
gi|388390161|gb|EIL51659.1| ribonucleoside hydrolase 1 [Escherichia coli 541-15]
Length = 311
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPE--PTFAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGAI +GN P AEFNI+ DP AA
Sbjct: 138 PELHSKIARIVIMGGAI-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 106/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAVKPLM----------------RELIIADNVHGESGLDGPALPEPT 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVELMA-------KTLRESAEP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHSKIARIVIMGGAIGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHVEDTERFR 206
>gi|213620909|ref|ZP_03373692.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 200
Score = 63.2 bits (152), Expect = 6e-07, Method: Composition-based stats.
Identities = 44/128 (34%), Positives = 60/128 (46%), Gaps = 33/128 (25%)
Query: 67 AFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEH 124
+F PQ G TA +++ + SA P+T+ G TN A+ L ++P L I
Sbjct: 96 SFAPQSG---------TAVELMAKTLRESAQPVTIVSTGPQTNVALLLNSHPELHTKIAR 146
Query: 125 IYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPV 184
I +MGGA+ ++GN P AEFNI+ DP AA V SGIPV
Sbjct: 147 IVIMGGAM-----------------ALGNW-----TPAAEFNIYVDPEAAEIVFQSGIPV 184
Query: 185 TIIPLDAT 192
+ LD T
Sbjct: 185 VMAGLDVT 192
Score = 47.0 bits (110), Expect = 0.038, Method: Composition-based stats.
Identities = 63/245 (25%), Positives = 104/245 (42%), Gaps = 53/245 (21%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + +K I S+ T+ V +L ++ R
Sbjct: 1 MALPIIIDCDPGHDDAIALVLALASPE--LEVKAITSSAGNQTPEKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + + +D ++G + D P P
Sbjct: 59 PDIPV------AGGAVKPLMREL----------------IIADNVHGESGLDGPALP--- 93
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
E S A Q EL + K++ ES +P +TI++ GP TN+A ++
Sbjct: 94 --EPSF---APQSGTAVEL-------MAKTLRESAQP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+ I + I+GG N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHTKIARIVIMGGAMALGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRR 647
+ +
Sbjct: 190 DVTHK 194
>gi|363896277|ref|ZP_09322830.1| hypothetical protein HMPREF9624_01574 [Oribacterium sp. ACB7]
gi|361961171|gb|EHL14394.1| hypothetical protein HMPREF9624_01574 [Oribacterium sp. ACB7]
Length = 320
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 69/138 (50%), Gaps = 28/138 (20%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ G +AP+ + +A +++ + S IT+ +G TN A L+
Sbjct: 86 VHGESGLEGPVLPENG--FAPV-EISALKLMEKILEESEEKITLVGIGPLTNIAQLLITR 142
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P LK+ IE IY+MGG +IGN P AE+NIF+DP AA
Sbjct: 143 PELKQKIEEIYIMGGG------------------TIGNW-----TPAAEYNIFADPEAAK 179
Query: 176 TVLHSGIPVTIIPLDATK 193
V +S +P+ + LD T+
Sbjct: 180 VVFNSELPIVMAGLDVTQ 197
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 57/102 (55%), Gaps = 13/102 (12%)
Query: 547 AVDVWKSIVESIEPGSKITILTNGPLTNLAQI-IGLQNSSSVIQDVYIVGGNKGQDNEKG 605
A+ + + I+E E KIT++ GPLTN+AQ+ I I+++YI+GG G
Sbjct: 109 ALKLMEKILEESE--EKITLVGIGPLTNIAQLLITRPELKQKIEEIYIMGGGT-----IG 161
Query: 606 NVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
N + AE+N+F DP AAK VF S+L I + L + ++
Sbjct: 162 N-----WTPAAEYNIFADPEAAKVVFNSELPIVMAGLDVTQK 198
>gi|392375844|ref|YP_003207677.1| inosine-uridine preferring nucleoside hydrolase [Candidatus
Methylomirabilis oxyfera]
gi|258593537|emb|CBE69878.1| Inosine-uridine preferring nucleoside hydrolase [Candidatus
Methylomirabilis oxyfera]
Length = 328
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 59/128 (46%), Gaps = 32/128 (25%)
Query: 79 LRQPTAQQVLINA---------ISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYV 127
LR P QQ L + IS P I V +G TN A+ + P ++ I +
Sbjct: 102 LRYPEPQQRLASQSAPALIAELISGAPGEIVVICIGPLTNLAMAIQAAPTEMAKVKEIVI 161
Query: 128 MGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTII 187
MGGAI+ P + P AEFN+++DP AA V SG+P+T++
Sbjct: 162 MGGAIQG---------------------PGNVTPGAEFNLYTDPEAARLVFTSGLPITLV 200
Query: 188 PLDATKTI 195
PLD T+ +
Sbjct: 201 PLDVTQRV 208
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 18/203 (8%)
Query: 540 PELRQPLAVDVWKSIVESIEPGS--KITILTNGPLTNLAQII-GLQNSSSVIQDVYIVGG 596
PE +Q LA +++ + G+ +I ++ GPLTNLA I + ++++ I+GG
Sbjct: 105 PEPQQRLASQSAPALIAELISGAPGEIVVICIGPLTNLAMAIQAAPTEMAKVKEIVIMGG 164
Query: 597 NKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILH 656
GNV + AEFN++ DP AA+ VF S L I L+PL + +RV +++
Sbjct: 165 AI---QGPGNV-----TPGAEFNLYTDPEAARLVFTSGLPITLVPLDVTQRVMLRAELIE 216
Query: 657 KLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIK 716
+ + + F + + + L ++Q + +G VI +P L +
Sbjct: 217 AVVRHVGSRVTRFVRDVTERLFGIEQERSGCAAIPLHDPLAVGVVI---DPSL---VVRR 270
Query: 717 SLEI-ISDGDISKVGQIIVNQEQ 738
L + + GD S G I ++ Q
Sbjct: 271 PLHVEVETGDGSAQGMTIADRRQ 293
>gi|423108211|ref|ZP_17095906.1| pyrimidine-specific ribonucleoside hydrolase rihA [Klebsiella
oxytoca 10-5243]
gi|423114186|ref|ZP_17101877.1| pyrimidine-specific ribonucleoside hydrolase rihA [Klebsiella
oxytoca 10-5245]
gi|376384616|gb|EHS97338.1| pyrimidine-specific ribonucleoside hydrolase rihA [Klebsiella
oxytoca 10-5243]
gi|376386202|gb|EHS98917.1| pyrimidine-specific ribonucleoside hydrolase rihA [Klebsiella
oxytoca 10-5245]
Length = 311
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 52/118 (44%), Gaps = 22/118 (18%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
SAGP+T+ G TN A+ L ++P L I I +MGGA+ +G
Sbjct: 115 SAGPVTIVATGPQTNVALLLNSHPELHSKIARIVMMGGAM-----------------VLG 157
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQN 210
N P EFNI+ DP AA V SGIPV + LD T + F R N
Sbjct: 158 NW-----QPAVEFNIYVDPEAAEIVFQSGIPVVMAGLDVTHKAQIHVEDIERFRRIGN 210
>gi|401676492|ref|ZP_10808476.1| ribonucleoside hydrolase 1 [Enterobacter sp. SST3]
gi|400216176|gb|EJO47078.1| ribonucleoside hydrolase 1 [Enterobacter sp. SST3]
Length = 312
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ G + P + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPEPG--FTP-QSCTAVELMAKVLRESAEPVTLVATGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNIF DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPSAEFNIFVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SG+PV + LD T
Sbjct: 176 IVFQSGLPVVMAGLDVT 192
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 108/264 (40%), Gaps = 67/264 (25%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M +P++FD D D +AL+ L P +++K + S+ T+ V +L ++ R
Sbjct: 1 MAQPIIFDCDPGHDDAIALVLALASPE--LDVKAVTSSAGNQTPDKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV +GG L L R+L
Sbjct: 59 TDIPV------------------------------AGGALKP-----LMREL------II 77
Query: 525 AENSVRFGASQDNDDPELRQP-------LAVDVWKSIV-ESIEPGSKITILTNGPLTNLA 576
A+N D P L +P AV++ ++ ES EP +T++ GP TN+A
Sbjct: 78 ADN---VHGESGLDGPALPEPGFTPQSCTAVELMAKVLRESAEP---VTLVATGPQTNVA 131
Query: 577 QIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ S I + I+GG G N PS AEFN+F+DP AA+ VF+S L
Sbjct: 132 LLLNSHPELHSKIARIVIMGGAMGLGN------WTPS---AEFNIFVDPEAAEIVFQSGL 182
Query: 636 EIKLIPLHMQRRVASFFKILHKLR 659
+ + L + R + + R
Sbjct: 183 PVVMAGLDVTHRAQIMADDIERFR 206
>gi|289627078|ref|ZP_06460032.1| inosine-uridine preferring nucleoside hydrolase [Pseudomonas
syringae pv. aesculi str. NCPPB 3681]
gi|289646265|ref|ZP_06477608.1| inosine-uridine preferring nucleoside hydrolase [Pseudomonas
syringae pv. aesculi str. 2250]
gi|422581967|ref|ZP_16657107.1| inosine-uridine preferring nucleoside hydrolase [Pseudomonas
syringae pv. aesculi str. 0893_23]
gi|330866814|gb|EGH01523.1| inosine-uridine preferring nucleoside hydrolase [Pseudomonas
syringae pv. aesculi str. 0893_23]
Length = 332
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 58/111 (52%), Gaps = 5/111 (4%)
Query: 93 SAGPITVFVMGSHTNFA--IFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDS 150
S ITV +G TN A + L N P + IE I M GA+ D + + ++ D
Sbjct: 120 SQDKITVLSLGGFTNIAKMLSLSNQPADFQMIEQIVAMAGAVYVDGNVAALNGAQKEWDQ 179
Query: 151 IGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENF 201
G Y SN YAE+N+F DP AA TV S +P+T++PLD + + ++
Sbjct: 180 -GEAY--SSNHYAEWNVFVDPVAADTVFQSSLPLTLVPLDVCNQVILDASY 227
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 135/323 (41%), Gaps = 74/323 (22%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLL---HM 461
M + V+ D DM D L++ YL+K P I++ GI V+ G D+ + ++ H+
Sbjct: 1 MNRKVIIDTDMGWDDVLSIAYLMKRPD--IDIIGITVTGCG-----ETDLGWGVIIAQHL 53
Query: 462 MGRDDIPVGLGDVFAVGEVNP-----KFP-PIGGCKYAKAIPLGSGGFLDSDTLYGLARD 515
+G I L V A G P +FP P K +G G L+ L L+ +
Sbjct: 54 LG---IGNRLSTVVAKGTDQPLEYDNRFPQPF---KNDMNDIMGLLGTLNPAALPALS-N 106
Query: 516 LPRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNL 575
LP Y A + SQD KIT+L+ G TN+
Sbjct: 107 LPAWEFMYQAVKN-----SQD--------------------------KITVLSLGGFTNI 135
Query: 576 AQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTV-------------PSSKYAEFNMFL 622
A+++ L N + Q + + G GNV + S+ YAE+N+F+
Sbjct: 136 AKMLSLSNQPADFQMIEQIVAMAGAVYVDGNVAALNGAQKEWDQGEAYSSNHYAEWNVFV 195
Query: 623 DPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQ 682
DP+AA VF+S L + L+PL + +V IL +K T + + Q L T
Sbjct: 196 DPVAADTVFQSSLPLTLVPLDVCNQV-----ILDASYSQKITASDPVALLVKQVLETKSG 250
Query: 683 SHHSYHHVDTFLGEVLGAVILGG 705
+H + V F + L +++ G
Sbjct: 251 THAEGYPVPIF--DPLATMLMAG 271
>gi|71735770|ref|YP_274668.1| inosine-uridine preferring nucleoside hydrolase [Pseudomonas
syringae pv. phaseolicola 1448A]
gi|416016894|ref|ZP_11564131.1| inosine-uridine preferring nucleoside hydrolase [Pseudomonas
syringae pv. glycinea str. B076]
gi|416026990|ref|ZP_11570321.1| inosine-uridine preferring nucleoside hydrolase [Pseudomonas
syringae pv. glycinea str. race 4]
gi|416028117|ref|ZP_11571217.1| inosine-uridine preferring nucleoside hydrolase [Pseudomonas
syringae pv. glycinea str. race 4]
gi|422407600|ref|ZP_16484566.1| inosine-uridine preferring nucleoside hydrolase [Pseudomonas
syringae pv. glycinea str. race 4]
gi|71556323|gb|AAZ35534.1| inosine-uridine preferring nucleoside hydrolase [Pseudomonas
syringae pv. phaseolicola 1448A]
gi|320324102|gb|EFW80184.1| inosine-uridine preferring nucleoside hydrolase [Pseudomonas
syringae pv. glycinea str. B076]
gi|320327815|gb|EFW83822.1| inosine-uridine preferring nucleoside hydrolase [Pseudomonas
syringae pv. glycinea str. race 4]
gi|320328651|gb|EFW84651.1| inosine-uridine preferring nucleoside hydrolase [Pseudomonas
syringae pv. glycinea str. race 4]
gi|330885471|gb|EGH19620.1| inosine-uridine preferring nucleoside hydrolase [Pseudomonas
syringae pv. glycinea str. race 4]
Length = 332
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 58/111 (52%), Gaps = 5/111 (4%)
Query: 93 SAGPITVFVMGSHTNFA--IFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDS 150
S ITV +G TN A + L N P + IE I M GA+ D + + ++ D
Sbjct: 120 SQDKITVLSLGGFTNIAKMLSLSNQPADFQMIEQIVAMAGAVYVDGNVAALNDAQKEWDQ 179
Query: 151 IGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENF 201
G Y SN YAE+N+F DP AA TV S +P+T++PLD + + ++
Sbjct: 180 -GEAY--SSNHYAEWNVFVDPVAADTVFQSSLPLTLVPLDVCNQVILDASY 227
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 135/323 (41%), Gaps = 74/323 (22%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLL---HM 461
M + V+ D DM D L++ YL+K P I++ GI V+ G D+ + ++ H+
Sbjct: 1 MNRKVIIDTDMGWDDVLSIAYLMKRPD--IDIVGITVTGCG-----ETDLGWGVIIAQHL 53
Query: 462 MGRDDIPVGLGDVFAVGEVNP-----KFP-PIGGCKYAKAIPLGSGGFLDSDTLYGLARD 515
+G I L V A G P +FP P K +G G L+ L L+ +
Sbjct: 54 LG---IGNRLSTVVAKGTDKPLEYDNRFPQPF---KNDMNDIMGLLGTLNPAALPALS-N 106
Query: 516 LPRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNL 575
LP Y A + SQD KIT+L+ G TN+
Sbjct: 107 LPAWEFMYQAVKN-----SQD--------------------------KITVLSLGGFTNI 135
Query: 576 AQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTV-------------PSSKYAEFNMFL 622
A+++ L N + Q + + G GNV + S+ YAE+N+F+
Sbjct: 136 AKMLSLSNQPADFQMIEQIVAMAGAVYVDGNVAALNDAQKEWDQGEAYSSNHYAEWNVFV 195
Query: 623 DPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQ 682
DP+AA VF+S L + L+PL + +V IL +K T + + Q L T
Sbjct: 196 DPVAADTVFQSSLPLTLVPLDVCNQV-----ILDASYSQKITASDPVALLVKQVLETKSG 250
Query: 683 SHHSYHHVDTFLGEVLGAVILGG 705
+H + V F + L +++ G
Sbjct: 251 THAEGYPVPIF--DPLATMLMAG 271
>gi|187919137|ref|YP_001888168.1| inosine/uridine-preferring nucleoside hydrolase [Burkholderia
phytofirmans PsJN]
gi|187717575|gb|ACD18798.1| Inosine/uridine-preferring nucleoside hydrolase [Burkholderia
phytofirmans PsJN]
Length = 321
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 20/134 (14%)
Query: 77 APLRQPTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
APL A + +I+ + A P +T+ +G TN A+ L ++P + ++ + +MGGA +
Sbjct: 99 APLDARPAHRFIIDTVRAHPGEVTLLAVGPLTNLALALADDPQIATLVKQVVIMGGAFGT 158
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKT 194
D +GN+ P AE NI +DP AA V + PV I+ LD T+
Sbjct: 159 DGV-------------LGNV-----TPAAEANILADPHAADIVFGAAWPVAIVGLDVTQP 200
Query: 195 IPVSENFFVEFERR 208
+S + R
Sbjct: 201 TIMSREYLASLRER 214
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 9/113 (7%)
Query: 552 KSIVESIE--PGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEKGNVF 608
+ I++++ PG ++T+L GPLTNLA + +++++ V I+GG G D GNV
Sbjct: 108 RFIIDTVRAHPG-EVTLLAVGPLTNLALALADDPQIATLVKQVVIMGGAFGTDGVLGNV- 165
Query: 609 TVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDR 661
+ AE N+ DP AA VF + + ++ L + + + L LR+R
Sbjct: 166 ----TPAAEANILADPHAADIVFGAAWPVAIVGLDVTQPTIMSREYLASLRER 214
>gi|428309213|ref|YP_007120190.1| inosine-uridine nucleoside N-ribohydrolase [Microcoleus sp. PCC
7113]
gi|428250825|gb|AFZ16784.1| Inosine-uridine nucleoside N-ribohydrolase [Microcoleus sp. PCC
7113]
Length = 307
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 26/149 (17%)
Query: 78 PLRQPTAQQVLINAISAG--PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSD 135
PL T Q+ ++ ++ A P+T+ V G T A L P ++++IE I MGGA+
Sbjct: 101 PLAPETGQEFMVRSLLAAEQPVTLMVTGPLTTVAAALDLAPQIEQHIERIVWMGGAL--- 157
Query: 136 CFNSTNSSQSEQCDSIGNLYPD---DSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
+ GN+ P + AE+N++ D AA+ V + IP+ + PLD T
Sbjct: 158 -------------NVPGNVEPALEPGQDGSAEWNVYWDSLAAHRVWQTQIPLILCPLDLT 204
Query: 193 KTIPVSENFFVEFERRQNTYEAQYCFQSL 221
+PV+ F RQ T + +Y L
Sbjct: 205 NQVPVTSEFV-----RQLTKQRRYPLSDL 228
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 118/281 (41%), Gaps = 49/281 (17%)
Query: 405 MGKPVVF-DIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMG 463
M KP+V D D D+LA + L+ + E I GI+V+ V +L ++G
Sbjct: 1 MSKPLVLMDQDGGVDDYLATLLLMTM--EHIQPLGIVVTPADCYIQQAVSATRKILDLVG 58
Query: 464 RDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRY 523
R DIPV V + NP FP + Y
Sbjct: 59 RSDIPVAQSTVRGI---NP-FPAL-----------------------------------Y 79
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKS-IVESIEPGSK-ITILTNGPLTNLAQIIGL 581
++ V N+ E++ PLA + + +V S+ + +T++ GPLT +A + L
Sbjct: 80 RRDSFVVDYLPILNEQDEIQTPLAPETGQEFMVRSLLAAEQPVTLMVTGPLTTVAAALDL 139
Query: 582 QNSSSVIQDVYIVGGNKGQDNEKGNV---FTVPSSKYAEFNMFLDPLAAKAVFESKLEIK 638
+ + Q + + G N GNV AE+N++ D LAA V+++++ +
Sbjct: 140 --APQIEQHIERIVWMGGALNVPGNVEPALEPGQDGSAEWNVYWDSLAAHRVWQTQIPLI 197
Query: 639 LIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMT 679
L PL + +V + + +L +++ P S + + +MT
Sbjct: 198 LCPLDLTNQVPVTSEFVRQLTKQRRYPLSDLAGQCYALVMT 238
>gi|420367659|ref|ZP_14868438.1| pyrimidine-specific ribonucleoside hydrolase rihA [Shigella
flexneri 1235-66]
gi|391323050|gb|EIQ79719.1| pyrimidine-specific ribonucleoside hydrolase rihA [Shigella
flexneri 1235-66]
Length = 311
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + S P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPSLPEPA--FAP-QACTAVELMAKTLRDSPEPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L NI I +MGGA+ +GN P AEFNIF DP AA
Sbjct: 138 PELHANIARIVIMGGAM-----------------GLGNW-----TPAAEFNIFVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 105/252 (41%), Gaps = 67/252 (26%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++FD D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILFDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPDKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV A G V P L RDL
Sbjct: 59 SDIPV------AGGAVKP-----------------------------LMRDL------II 77
Query: 525 AENSVRFGASQDNDDPELRQP-------LAVDVW-KSIVESIEPGSKITILTNGPLTNLA 576
A+N D P L +P AV++ K++ +S EP +TI++ GP TN+A
Sbjct: 78 ADN---VHGESGLDGPSLPEPAFAPQACTAVELMAKTLRDSPEP---VTIVSTGPQTNVA 131
Query: 577 QIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ + I + I+GG G N + AEFN+F+DP AA+ VF+S +
Sbjct: 132 LLLNSHPELHANIARIVIMGGAMGLGN---------WTPAAEFNIFVDPEAAEIVFQSGI 182
Query: 636 EIKLIPLHMQRR 647
+ + L + +
Sbjct: 183 PVVMAGLDVTHK 194
>gi|307727195|ref|YP_003910408.1| Inosine/uridine-preferring nucleoside hydrolase [Burkholderia sp.
CCGE1003]
gi|307587720|gb|ADN61117.1| Inosine/uridine-preferring nucleoside hydrolase [Burkholderia sp.
CCGE1003]
Length = 321
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 20/134 (14%)
Query: 77 APLRQPTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
APL A + +I+ + A P +T+ +G TN A+ L ++PH+ ++ + +MGGA
Sbjct: 99 APLDSRPAHRFIIDTVRAHPGEVTLLAVGPLTNLALALADDPHIAPLVKQVVIMGGA--- 155
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKT 194
F + S GN+ P AE NI DP AA V + PVTI+ LD T+
Sbjct: 156 --FGTHGVS--------GNV-----TPAAEANILGDPDAADIVFGARWPVTIVGLDVTQR 200
Query: 195 IPVSENFFVEFERR 208
+S+++ R
Sbjct: 201 TVMSQDYLASIRDR 214
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 9/113 (7%)
Query: 552 KSIVESIE--PGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEKGNVF 608
+ I++++ PG ++T+L GPLTNLA + + + +++ V I+GG G GNV
Sbjct: 108 RFIIDTVRAHPG-EVTLLAVGPLTNLALALADDPHIAPLVKQVVIMGGAFGTHGVSGNV- 165
Query: 609 TVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDR 661
+ AE N+ DP AA VF ++ + ++ L + +R L +RDR
Sbjct: 166 ----TPAAEANILGDPDAADIVFGARWPVTIVGLDVTQRTVMSQDYLASIRDR 214
>gi|257484168|ref|ZP_05638209.1| inosine-uridine preferring nucleoside hydrolase [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|422678903|ref|ZP_16737177.1| inosine-uridine preferring nucleoside hydrolase [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|331008250|gb|EGH88307.1| inosine-uridine preferring nucleoside hydrolase [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
Length = 332
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 59/112 (52%), Gaps = 7/112 (6%)
Query: 93 SAGPITVFVMGSHTNFA--IFLMNNPHLKKNIEHIYVMGGAIRSDC-FNSTNSSQSEQCD 149
S ITV +G TN A + L N P + IE I M GA+ D + N +Q E
Sbjct: 120 SQDKITVLSLGGFTNIAKMLSLSNQPADFQMIEQIVAMAGAVYVDGNVAALNDAQKEW-- 177
Query: 150 SIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENF 201
+ G Y SN YAE+N+F DP AA TV S +P+T++PLD + + ++
Sbjct: 178 NQGEAY--SSNHYAEWNVFVDPVAADTVFQSSLPLTLVPLDVCNQVILDASY 227
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 135/323 (41%), Gaps = 74/323 (22%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLL---HM 461
M + V+ D DM D L++ YL+K P I++ GI V+ G D+ + ++ H+
Sbjct: 1 MNRKVIIDTDMGWDDVLSIAYLMKRPD--IDIVGITVTGCG-----ETDLGWGVIIAQHL 53
Query: 462 MGRDDIPVGLGDVFAVGEVNP-----KFP-PIGGCKYAKAIPLGSGGFLDSDTLYGLARD 515
+G I L V A G P +FP P K +G G L+ L L+ +
Sbjct: 54 LG---IGNRLSTVVAKGTDKPLEYDNRFPQPF---KNDMNDIMGLLGTLNPAALPALS-N 106
Query: 516 LPRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNL 575
LP Y A + SQD KIT+L+ G TN+
Sbjct: 107 LPAWEFMYQAVKN-----SQD--------------------------KITVLSLGGFTNI 135
Query: 576 AQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTV-------------PSSKYAEFNMFL 622
A+++ L N + Q + + G GNV + S+ YAE+N+F+
Sbjct: 136 AKMLSLSNQPADFQMIEQIVAMAGAVYVDGNVAALNDAQKEWNQGEAYSSNHYAEWNVFV 195
Query: 623 DPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQ 682
DP+AA VF+S L + L+PL + +V IL +K T + + Q L T
Sbjct: 196 DPVAADTVFQSSLPLTLVPLDVCNQV-----ILDASYSQKITASDPVALLVKQVLETKSG 250
Query: 683 SHHSYHHVDTFLGEVLGAVILGG 705
+H + V F + L +++ G
Sbjct: 251 THAEGYPVPIF--DPLATMLMAG 271
>gi|298158516|gb|EFH99583.1| Inosine-uridine preferring nucleoside hydrolase [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
Length = 332
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 58/111 (52%), Gaps = 5/111 (4%)
Query: 93 SAGPITVFVMGSHTNFA--IFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDS 150
S ITV +G TN A + L N P + IE I M GA+ D + + ++ D
Sbjct: 120 SQDKITVLSLGGFTNIAKMLSLSNQPADFQMIEQIVAMAGAVYVDGNVAALNGAQKEWDQ 179
Query: 151 IGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENF 201
G Y SN YAE+N+F DP AA TV S +P+T++PLD + + ++
Sbjct: 180 -GEAY--SSNHYAEWNVFVDPVAADTVFQSSLPLTLVPLDVCNQVILDASY 227
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 135/323 (41%), Gaps = 74/323 (22%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLL---HM 461
M + V+ D DM D L++ YL+K P I++ GI V+ G D+ + ++ H+
Sbjct: 1 MNRKVIIDTDMGWDDVLSIAYLMKRPD--IDIIGITVTGCG-----ETDLGWGVIIAQHL 53
Query: 462 MGRDDIPVGLGDVFAVGEVNP-----KFP-PIGGCKYAKAIPLGSGGFLDSDTLYGLARD 515
+G I L V A G P +FP P K +G G L+ L L+ +
Sbjct: 54 LG---IGNRLSTVVAKGTDQPLEYDNRFPQPF---KNDMNDIMGLLGTLNPAALPALS-N 106
Query: 516 LPRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNL 575
LP Y A + SQD KIT+L+ G TN+
Sbjct: 107 LPAWEFMYQAVKN-----SQD--------------------------KITVLSLGGFTNI 135
Query: 576 AQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTV-------------PSSKYAEFNMFL 622
A+++ L N + Q + + G GNV + S+ YAE+N+F+
Sbjct: 136 AKMLSLSNQPADFQMIEQIVAMAGAVYVDGNVAALNGAQKEWDQGEAYSSNHYAEWNVFV 195
Query: 623 DPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQ 682
DP+AA VF+S L + L+PL + +V IL +K T + + Q L T
Sbjct: 196 DPVAADTVFQSSLPLTLVPLDVCNQV-----ILDASYSQKITASDPVALLVKQVLETKSG 250
Query: 683 SHHSYHHVDTFLGEVLGAVILGG 705
+H + V F + L +++ G
Sbjct: 251 THAEGYPVPIF--DPLATMLMAG 271
>gi|406838586|ref|ZP_11098180.1| ribonucleoside hydrolase RihC [Lactobacillus vini DSM 20605]
Length = 306
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 24/147 (16%)
Query: 95 GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNL 154
P+ + G++TN A L+ P +KK I + +MGG+I +S
Sbjct: 118 APMIIVATGAYTNIAELLLKYPEIKKQISRLVLMGGSISGGNVSSV-------------- 163
Query: 155 YPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEA 214
AEFN+++DP AA V SG+P+ +I LD T V+ + T
Sbjct: 164 --------AEFNVYTDPDAAKIVYQSGVPIVMIGLDVTLQALVTWETLKKLATLGKT--G 213
Query: 215 QYCFQSLKMIRDTWSGSPPFHEAYCMW 241
+Q + +D +S P H+ ++
Sbjct: 214 MMLYQLITAYQDIYSNGKPLHDVNTIF 240
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 28/164 (17%)
Query: 537 NDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQI------IGLQNSSSVIQD 590
N DP +P +++++ ++ P + I+ G TN+A++ I Q S V+
Sbjct: 99 NSDP---RPAVKAIYQTLKQAPAP---MIIVATGAYTNIAELLLKYPEIKKQISRLVLMG 152
Query: 591 VYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVAS 650
I GGN S AEFN++ DP AAK V++S + I +I L + +
Sbjct: 153 GSISGGN--------------VSSVAEFNVYTDPDAAKIVYQSGVPIVMIGLDVTLQALV 198
Query: 651 FFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFL 694
++ L KL KT ++ +L+ + + H V+T
Sbjct: 199 TWETLKKLATLGKTGMMLY--QLITAYQDIYSNGKPLHDVNTIF 240
>gi|422595146|ref|ZP_16669435.1| inosine-uridine preferring nucleoside hydrolase [Pseudomonas
syringae pv. lachrymans str. M301315]
gi|330985452|gb|EGH83555.1| inosine-uridine preferring nucleoside hydrolase [Pseudomonas
syringae pv. lachrymans str. M301315]
Length = 332
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 58/111 (52%), Gaps = 5/111 (4%)
Query: 93 SAGPITVFVMGSHTNFA--IFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDS 150
S ITV +G TN A + L N P + IE I M GA+ D + + ++ D
Sbjct: 120 SQDKITVLSLGGFTNIAKMLSLSNQPADFQMIEQIVAMAGAVYVDGNVAALNGAQKEWDQ 179
Query: 151 IGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENF 201
G Y SN YAE+N+F DP AA TV S +P+T++PLD + + ++
Sbjct: 180 -GEAY--SSNHYAEWNVFVDPVAADTVFQSSLPLTLVPLDVCNQVILDASY 227
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 135/323 (41%), Gaps = 74/323 (22%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLL---HM 461
M + V+ D DM D L++ YL+K P I++ GI V+ G D+ + ++ H+
Sbjct: 1 MNRKVIIDTDMGWDDVLSIAYLMKRPD--IDIVGITVTGCG-----ETDLGWGVIIAQHL 53
Query: 462 MGRDDIPVGLGDVFAVGEVNP-----KFP-PIGGCKYAKAIPLGSGGFLDSDTLYGLARD 515
+G I L V A G P +FP P K +G G L+ L L+ +
Sbjct: 54 LG---IGNRLSTVVAKGTDKPLEYDNRFPQPF---KNDMNDIMGLLGTLNPAALPALS-N 106
Query: 516 LPRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNL 575
LP Y A + SQD KIT+L+ G TN+
Sbjct: 107 LPAWEFMYQAVKN-----SQD--------------------------KITVLSLGGFTNI 135
Query: 576 AQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTV-------------PSSKYAEFNMFL 622
A+++ L N + Q + + G GNV + S+ YAE+N+F+
Sbjct: 136 AKMLSLSNQPADFQMIEQIVAMAGAVYVDGNVAALNGAQKEWDQGEAYSSNHYAEWNVFV 195
Query: 623 DPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQ 682
DP+AA VF+S L + L+PL + +V IL +K T + + Q L T
Sbjct: 196 DPVAADTVFQSSLPLTLVPLDVCNQV-----ILDASYSQKITASDPVALLVKQVLETKSG 250
Query: 683 SHHSYHHVDTFLGEVLGAVILGG 705
+H + V F + L +++ G
Sbjct: 251 THAEGYPVPIF--DPLATMLMAG 271
>gi|418411499|ref|ZP_12984767.1| hypothetical protein HMPREF9281_00371 [Staphylococcus epidermidis
BVS058A4]
gi|410893043|gb|EKS40834.1| hypothetical protein HMPREF9281_00371 [Staphylococcus epidermidis
BVS058A4]
Length = 302
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 37/186 (19%)
Query: 85 QQVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQ 144
+ +L+N + P+T+ +G TN AI L N P ++ I+ I +MGG+
Sbjct: 109 RNLLVN--TQEPLTLIAIGPLTNIAILLTNYPEVQPFIKEIVLMGGSTGR---------- 156
Query: 145 SEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVE 204
GN+ P AEFNI+ DP AA V +SG+P+T+I LD + + +F +
Sbjct: 157 -------GNV-----TPLAEFNIYCDPEAAQIVFNSGLPLTMIGLDLAREALFTHHFVKD 204
Query: 205 FERRQNTYEAQY-CFQSLKMIRDTWSGSPPFHEAYCMWDSFMAGVALSIMLNSSSHNGEN 263
F+ T Y FQ K S F + ++D F + +L+ + N +
Sbjct: 205 FKDTNATSSMLYNLFQHYK--------SEDFEIGFKLYDVF----TILYLLDPEAFNVKE 252
Query: 264 ACSEME 269
A +++E
Sbjct: 253 AYTQIE 258
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 73/140 (52%), Gaps = 19/140 (13%)
Query: 535 QDNDDPELRQPLAVDVWKSI-VESIEPGSKITILTNGPLTNLAQIIGLQNSSSV---IQD 590
Q N D +L AV+ +++ V + EP +T++ GPLTN+A I L N V I++
Sbjct: 93 QINQD-DLTSIHAVEAMRNLLVNTQEP---LTLIAIGPLTNIA--ILLTNYPEVQPFIKE 146
Query: 591 VYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVAS 650
+ ++GG+ G +GNV + AEFN++ DP AA+ VF S L + +I L + R
Sbjct: 147 IVLMGGSTG----RGNV-----TPLAEFNIYCDPEAAQIVFNSGLPLTMIGLDLAREALF 197
Query: 651 FFKILHKLRDRKKTPESVFS 670
+ +D T +++
Sbjct: 198 THHFVKDFKDTNATSSMLYN 217
>gi|145299817|ref|YP_001142658.1| ribonucleoside hydrolase 1 [Aeromonas salmonicida subsp.
salmonicida A449]
gi|418358156|ref|ZP_12960837.1| ribonucleoside hydrolase 1 [Aeromonas salmonicida subsp.
salmonicida 01-B526]
gi|142852589|gb|ABO90910.1| purine nucleosidase [Aeromonas salmonicida subsp. salmonicida A449]
gi|356688582|gb|EHI53139.1| ribonucleoside hydrolase 1 [Aeromonas salmonicida subsp.
salmonicida 01-B526]
Length = 311
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 69/148 (46%), Gaps = 31/148 (20%)
Query: 51 PVGQRLYVNTNY----GLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGS 104
P+ + L + N GL LP +AP + TA ++++ + S P+T+ G
Sbjct: 70 PLARELIIADNVHGESGLDGPTLPDPA--FAP-QAMTALELMVKCLRESPEPVTLVPTGP 126
Query: 105 HTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAE 164
TN A+ L +P LK NI I +MGGA + GN P AE
Sbjct: 127 LTNIALLLAAHPELKPNIARIVLMGGAAGA-----------------GNW-----TPAAE 164
Query: 165 FNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
FNI+ DP AA V SGIP+T+ LD T
Sbjct: 165 FNIYVDPEAADMVFQSGIPITMCGLDVT 192
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 106/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M PV+ D D D +ALI L P + + + S+ T++ +L ++GR
Sbjct: 1 MALPVILDCDPGHDDAIALILALASPE--LKVLAVTTSAGNQTQEKTLNNALRILTLLGR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DDIPV G PK PL + +D ++G + D P P
Sbjct: 59 DDIPVAAG--------APK-------------PLARE-LIIADNVHGESGLDGPTLPDPA 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A P+ L + V K + ES EP +T++ GPLTN+A ++
Sbjct: 97 FA--------------PQAMTALELMV-KCLRESPEP---VTLVPTGPLTNIALLLAAHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
I + ++GG G N + AEFN+++DP AA VF+S + I + L
Sbjct: 139 ELKPNIARIVLMGGAAGAGN---------WTPAAEFNIYVDPEAADMVFQSGIPITMCGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + ++R
Sbjct: 190 DVTHEAQVMDEDIARVR 206
>gi|358064208|ref|ZP_09150788.1| hypothetical protein HMPREF9473_02851 [Clostridium hathewayi
WAL-18680]
gi|356697564|gb|EHI59144.1| hypothetical protein HMPREF9473_02851 [Clostridium hathewayi
WAL-18680]
Length = 315
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 47/98 (47%), Gaps = 22/98 (22%)
Query: 96 PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY 155
P+T+ + TN A+ L N P K NIE I MGG+IR+ GN
Sbjct: 120 PVTILALAPLTNLALLLENYPECKPNIERIVFMGGSIRT-----------------GN-- 160
Query: 156 PDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
P + FN+ DP AA VL SG+P + PLD T+
Sbjct: 161 ---PTPVSTFNVLVDPEAAKYVLKSGVPFHMCPLDTTR 195
>gi|337267224|ref|YP_004611279.1| Inosine/uridine-preferring nucleoside hydrolase [Mesorhizobium
opportunistum WSM2075]
gi|336027534|gb|AEH87185.1| Inosine/uridine-preferring nucleoside hydrolase [Mesorhizobium
opportunistum WSM2075]
Length = 314
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 63/141 (44%), Gaps = 27/141 (19%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP---ITVFVMGSHTNFAIFLM 113
YV+ GL A LP+ PL+ A L+ I P +TV +G TN A+ +
Sbjct: 82 YVHGETGLDGADLPE---PVTPLQSEHAVNYLVRTIMEAPEGELTVCTLGPMTNLAMAMT 138
Query: 114 NNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFA 173
P + + + +MGG F N++ P AEFNIF DP A
Sbjct: 139 MEPRIVPRLREVVLMGGGF----FQGGNAT-----------------PAAEFNIFVDPHA 177
Query: 174 AYTVLHSGIPVTIIPLDATKT 194
A+ V SG+PVT+ +D T T
Sbjct: 178 AHKVFDSGVPVTMAGIDCTYT 198
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 102/235 (43%), Gaps = 50/235 (21%)
Query: 407 KPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDD 466
+ ++ D D D A+++ L P EL ++ GI + T ++ + GR D
Sbjct: 4 RKIIIDTDPGQDDAFAILFALGSPAEL-DVVGITTVGGNVPLALTSKNALKVVELAGRPD 62
Query: 467 IPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGL-ARDLPRSPRRYTA 525
+PV GC L + ++ +T GL DLP +
Sbjct: 63 VPVH-----------------AGCPAPMVRKLITAEYVHGET--GLDGADLPEPVTPLQS 103
Query: 526 ENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ-NS 584
E++V + + ++I+E+ P ++T+ T GP+TNLA + ++
Sbjct: 104 EHAVNY------------------LVRTIMEA--PEGELTVCTLGPMTNLAMAMTMEPRI 143
Query: 585 SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKL 639
+++V ++GG Q GN ++ AEFN+F+DP AA VF+S + + +
Sbjct: 144 VPRLREVVLMGGGFFQ---GGN-----ATPAAEFNIFVDPHAAHKVFDSGVPVTM 190
>gi|218549773|ref|YP_002383564.1| ribonucleoside hydrolase 1 [Escherichia fergusonii ATCC 35469]
gi|424817150|ref|ZP_18242301.1| ribonucleoside hydrolase 1 [Escherichia fergusonii ECD227]
gi|226739278|sp|B7LKV4.1|RIHA_ESCF3 RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|218357314|emb|CAQ89949.1| ribonucleoside hydrolase 1 [Escherichia fergusonii ATCC 35469]
gi|325498170|gb|EGC96029.1| ribonucleoside hydrolase 1 [Escherichia fergusonii ECD227]
Length = 311
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPE--PTFAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ IGN P AEFNI+ DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GIGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 107/264 (40%), Gaps = 67/264 (25%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV A G V P L RDL
Sbjct: 59 TDIPV------AGGAVKP-----------------------------LMRDL------II 77
Query: 525 AENSVRFGASQDNDDPELRQPL-------AVDVW-KSIVESIEPGSKITILTNGPLTNLA 576
A+N D P L +P AV++ K++ ES EP +TI++ GP TN+A
Sbjct: 78 ADN---VHGESGLDGPALPEPTFAPQNCTAVELMAKTLRESAEP---VTIVSTGPQTNVA 131
Query: 577 QIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ S I + I+GG G N + AEFN+++DP AA+ VF+S +
Sbjct: 132 LLLNSHPELHSKIARIVIMGGAMGIGN---------WTPAAEFNIYVDPEAAEIVFQSGI 182
Query: 636 EIKLIPLHMQRRVASFFKILHKLR 659
+ + L + + + + R
Sbjct: 183 PVVMAGLDVTHKAQIHVEDTERFR 206
>gi|168465838|ref|ZP_02699720.1| inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Newport str. SL317]
gi|418762991|ref|ZP_13319115.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|418766521|ref|ZP_13322593.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|418771697|ref|ZP_13327703.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|418775053|ref|ZP_13331014.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|418780994|ref|ZP_13336879.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|418804943|ref|ZP_13360547.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
gi|419790356|ref|ZP_14316028.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|419793761|ref|ZP_14319377.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|195631819|gb|EDX50339.1| inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Newport str. SL317]
gi|392613434|gb|EIW95890.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|392615851|gb|EIW98286.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|392733272|gb|EIZ90474.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|392734235|gb|EIZ91417.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|392736532|gb|EIZ93694.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|392747721|gb|EJA04712.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|392750253|gb|EJA07229.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|392769972|gb|EJA26701.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
Length = 311
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 60/128 (46%), Gaps = 33/128 (25%)
Query: 67 AFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEH 124
+F PQ G TA +++ + SA P+T+ G TN A+ L ++P L I
Sbjct: 96 SFAPQSG---------TAVELMAKTLRESAQPVTIVSTGPQTNVALLLNSHPELHTKIAR 146
Query: 125 IYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPV 184
I +MGGA+ ++GN P AEFNI+ DP AA V SGIPV
Sbjct: 147 IVIMGGAM-----------------ALGNW-----TPAAEFNIYVDPEAAEIVFQSGIPV 184
Query: 185 TIIPLDAT 192
+ LD T
Sbjct: 185 VMAGLDVT 192
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 111/276 (40%), Gaps = 54/276 (19%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + +K I S+ T+ V +L ++ R
Sbjct: 1 MALPIIIDCDPGHDDAIALVLALASPE--LEVKAITSSAGNQTPEKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 PDIPV------AGGAVKPLM----------------RELIIADNVHGESGLDGPALP--- 93
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
E S A Q EL K++ ES +P +TI++ GP TN+A ++
Sbjct: 94 --EPSF---APQSGTAVELMA-------KTLRESAQP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+ I + I+GG N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHTKIARIVIMGGAMALGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLM 678
+ + + + RD P S LL M
Sbjct: 190 DVTHKAQIHAADIERFRDIGN-PISTIVAELLDFFM 224
>gi|403236468|ref|ZP_10915054.1| hypothetical protein B1040_11934 [Bacillus sp. 10403023]
Length = 305
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 81/195 (41%), Gaps = 26/195 (13%)
Query: 83 TAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNST 140
TA +IN + P +T+ +G TN A+ + P L + + + +MGGA+
Sbjct: 103 TAVDFIINQVKKRPHEVTIIAVGPLTNLALAIQKAPELVRLVGDVVIMGGAV-------- 154
Query: 141 NSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSEN 200
P ++ P+AE NIF+DP AA V S +P+T++ LD T + +
Sbjct: 155 -------------FVPGNATPHAEANIFTDPEAAKVVFSSSLPITLVGLDVTMQTLLPRD 201
Query: 201 FFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPFHEAYCMWDSFMAGVALSIMLNSSSHN 260
+ E + + ++ + D + P + D GVA+ ++
Sbjct: 202 ---KVEAWRGSEAGEFFANMVGFYHDFYESFRPGIGGCGLHDPLAVGVAIDPSFVKPTYI 258
Query: 261 GENACSEMEYMNLTV 275
G N +E E TV
Sbjct: 259 GVNVITEGEEDGRTV 273
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 101/245 (41%), Gaps = 61/245 (24%)
Query: 407 KPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDD 466
K V+FD+D D +A+ Y + P + + G+ S A +L +G+
Sbjct: 2 KKVIFDVDTGIDDAMAIAYAVNSP--ELEILGLTTSYGNVEVEAATRNTLAVLEKVGKR- 58
Query: 467 IPVGLGDVFAVGEVNPKFPPIGGCKYAKAI--PLGSGGFLDSDTLYGLARDLPRSPRRYT 524
IPV FA E K G YAK + G G LD Y
Sbjct: 59 IPV-----FAGAEKPLKRKTREG--YAKNVHGEDGLGNVLDFQPQYSA-----------E 100
Query: 525 AENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS 584
+E +V F +Q P ++TI+ GPLTNLA + +Q +
Sbjct: 101 SETAVDFIINQVKKRPH---------------------EVTIIAVGPLTNLA--LAIQKA 137
Query: 585 SSVIQ---DVYIVGGNKGQDNEKGNVFTVP--SSKYAEFNMFLDPLAAKAVFESKLEIKL 639
+++ DV I+GG VF VP ++ +AE N+F DP AAK VF S L I L
Sbjct: 138 PELVRLVGDVVIMGGA---------VF-VPGNATPHAEANIFTDPEAAKVVFSSSLPITL 187
Query: 640 IPLHM 644
+ L +
Sbjct: 188 VGLDV 192
>gi|421894148|ref|ZP_16324639.1| inosine-uridine preferring nucleoside hydrolase family protein
[Pediococcus pentosaceus IE-3]
gi|385272976|emb|CCG90011.1| inosine-uridine preferring nucleoside hydrolase family protein
[Pediococcus pentosaceus IE-3]
Length = 316
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 114/233 (48%), Gaps = 29/233 (12%)
Query: 536 DNDDPELR---QPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS-SSVIQDV 591
+N+ P+ + QP +D+ + I S + K+T++ GPLT+LA+ I + + I ++
Sbjct: 97 NNNQPKTKLASQPAHLDMLEKIKASQQ---KVTLIMTGPLTDLARAIEIDPTIVDNIDEL 153
Query: 592 YIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASF 651
+ +GG+ N GNV AE+N + DP A K VF++ L+I ++ L +V
Sbjct: 154 FWMGGSM---NGVGNVAEPEHDGTAEWNAYWDPQAVKTVFDTDLKITIVSLDSTNQVP-- 208
Query: 652 FKILHKLRDRKKTPESVFSQRLLQGLMTLQQSH---HSYHHVDT-FLGEVLGAVILGGNP 707
+ LR R QR L + Q + HS+ T +L +VL ++ P
Sbjct: 209 --LTKALRIRWA------KQRQFPALDLIGQGYSLVHSFEANSTYYLWDVL-TTLVSKYP 259
Query: 708 HLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEV 760
L + IK+ +I+DG G+ V + G+ + + +N A+++D F E+
Sbjct: 260 ELVDSKPIKA-AVITDG--PSAGKTFVT-DNGRPLTFVTQVNSALFFDKFDEL 308
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 107/253 (42%), Gaps = 38/253 (15%)
Query: 9 VGVGGEGGILPNGTILPDVGGYQPIIDQ-GMSTAGECRYRQAIPVGQ-----RL--YVNT 60
+GVG G + + P V + IID G T E + PV Q RL +
Sbjct: 30 IGVGAVGA---DSYVEPAVSASRKIIDLFGQDTTLEVAKSNSRPVNQFPKEWRLSAFSFD 86
Query: 61 NYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAG--PITVFVMGSHTNFAIFLMNNPHL 118
++ + L + L A ++ I A +T+ + G T+ A + +P +
Sbjct: 87 DFPILNEHLDNNNQPKTKLASQPAHLDMLEKIKASQQKVTLIMTGPLTDLARAIEIDPTI 146
Query: 119 KKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVL 178
NI+ ++ MGG++ + +GN+ + + AE+N + DP A TV
Sbjct: 147 VDNIDELFWMGGSM----------------NGVGNVAEPEHDGTAEWNAYWDPQAVKTVF 190
Query: 179 HSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPF--HE 236
+ + +TI+ LD+T +P+++ + + + Q F +L +I +S F +
Sbjct: 191 DTDLKITIVSLDSTNQVPLTKALRIRWAK-------QRQFPALDLIGQGYSLVHSFEANS 243
Query: 237 AYCMWDSFMAGVA 249
Y +WD V+
Sbjct: 244 TYYLWDVLTTLVS 256
>gi|150375808|ref|YP_001312404.1| inosine/uridine-preferring nucleoside hydrolase [Sinorhizobium
medicae WSM419]
gi|150030355|gb|ABR62471.1| Inosine/uridine-preferring nucleoside hydrolase [Sinorhizobium
medicae WSM419]
Length = 334
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 92/237 (38%), Gaps = 53/237 (22%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQRLYVNT 60
+ R+DIPV G Y+PI+ G + PV +
Sbjct: 55 LAGRNDIPVAAGA----------------YRPIV-------GNAKADMEAPVHFEKQLQA 91
Query: 61 NYGLR-KAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPH 117
+G R + F P A +++ + A P +++ G TN A+ L P
Sbjct: 92 RFGDRLQGFNPPAPEPACKAMGKHAIDFIVDTVRANPGEVSIVATGPQTNVALALQMAPD 151
Query: 118 LKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTV 177
+ + ++ I V+GG CF + P + P +E+NI++DP AA V
Sbjct: 152 IARLVKQIVVLGG-----CFQT----------------PGNMTPVSEYNIWADPEAARVV 190
Query: 178 LHSGIPVTIIPLDATKTIPVSENFFV--EFERRQNTYEA----QYCFQSLKMIRDTW 228
L SG PV ++PLD + V+ + + + Y A Y ++ + D W
Sbjct: 191 LRSGAPVILVPLDVCEDNRVAASMLTRDDLNDLASLYPASKAVSYVCETFPIYIDIW 247
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 106/264 (40%), Gaps = 57/264 (21%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGIL-VSSTGWATSATVDVVYDLLHMMGRDDI 467
++ D+D + D LA+++ L+G+ V+ +VV + L + GR+DI
Sbjct: 4 IILDVDSAGDDILAILF--SAGCADTKLEGVTTVAGAAGGIEQVTNVVLNTLTLAGRNDI 61
Query: 468 PVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAEN 527
PV G + PI G A +P + +
Sbjct: 62 PVAAG----------AYRPIVGNAKADM----------------------EAPVHFEKQL 89
Query: 528 SVRFGASQDNDDPELRQPLAVDVWKSIVESI------EPGSKITILTNGPLTNLAQIIGL 581
RFG +P +P + K ++ I PG +++I+ GP TN+A + +
Sbjct: 90 QARFGDRLQGFNPPAPEPACKAMGKHAIDFIVDTVRANPG-EVSIVATGPQTNVALALQM 148
Query: 582 Q-NSSSVIQDVYIVGGNKGQDNEKGNVFTVPS--SKYAEFNMFLDPLAAKAVFESKLEIK 638
+ + +++ + ++GG F P + +E+N++ DP AA+ V S +
Sbjct: 149 APDIARLVKQIVVLGG----------CFQTPGNMTPVSEYNIWADPEAARVVLRSGAPVI 198
Query: 639 LIPLHM--QRRVASFFKILHKLRD 660
L+PL + RVA+ L D
Sbjct: 199 LVPLDVCEDNRVAASMLTRDDLND 222
>gi|423207398|ref|ZP_17193954.1| hypothetical protein HMPREF1168_03589 [Aeromonas veronii AMC34]
gi|404620465|gb|EKB17362.1| hypothetical protein HMPREF1168_03589 [Aeromonas veronii AMC34]
Length = 322
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 88/172 (51%), Gaps = 23/172 (13%)
Query: 504 LDSDTLYGLARDLPRSPRRYTAENSVRFGASQDNDDPELRQPLAVD---VWKSIVESIE- 559
+ +D G A L R P ++ G S D +A D W+ IVE+++
Sbjct: 58 MKADVAKGAAAPLLREP---VGPTTIVHGPSGFGDMEAGEVAIAPDPRPAWQYIVEAVKA 114
Query: 560 -PGSKITILTNGPLTNLAQIIGLQNSS---SVIQDVYIVGGNKGQDNEKGNVFTVPSSKY 615
PG +IT++T GPLTNLA + LQ + S+++ V ++GG G + +GNV + Y
Sbjct: 115 APG-EITLVTIGPLTNLA--LALQQAPEIVSLVKQVVVMGGAFGVNGHRGNV-----TPY 166
Query: 616 AEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFK--ILHKLRDRKKTP 665
AE N+ DP AA VF + + +I L + ++ SFF L +LRD+ P
Sbjct: 167 AEANIHDDPDAADRVFTADWPVVIIGLDVTQQ--SFFSSAYLDELRDKAGEP 216
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 69/160 (43%), Gaps = 23/160 (14%)
Query: 51 PVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNF 108
PVG V+ G + G AP +P A Q ++ A+ A P IT+ +G TN
Sbjct: 74 PVGPTTIVHGPSGFGD--MEAGEVAIAPDPRP-AWQYIVEAVKAAPGEITLVTIGPLTNL 130
Query: 109 AIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIF 168
A+ L P + ++ + VMGGA N + GN+ PYAE NI
Sbjct: 131 ALALQQAPEIVSLVKQVVVMGGAF------GVNGHR-------GNV-----TPYAEANIH 172
Query: 169 SDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERR 208
DP AA V + PV II LD T+ S + E +
Sbjct: 173 DDPDAADRVFTADWPVVIIGLDVTQQSFFSSAYLDELRDK 212
>gi|423094553|ref|ZP_17082349.1| pyrimidine-specific ribonucleoside hydrolase RihA [Pseudomonas
fluorescens Q2-87]
gi|397887423|gb|EJL03906.1| pyrimidine-specific ribonucleoside hydrolase RihA [Pseudomonas
fluorescens Q2-87]
Length = 342
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 24/124 (19%)
Query: 79 LRQPTAQQVLINAISAGP---ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSD 135
L + A LI+ + A IT+ ++G TN A+ L+ P + + I+ + +MGGA
Sbjct: 129 LAKGNAVNYLIDTLKAAKPHSITIAMLGPQTNLALALIQEPDIVQGIKEVVIMGGA---- 184
Query: 136 CFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTI 195
FN N + P AEFN+++DP AA V SG+ +T +PLD T I
Sbjct: 185 HFNGGNIT-----------------PVAEFNLYADPQAAEVVAKSGVKLTYLPLDVTHKI 227
Query: 196 PVSE 199
SE
Sbjct: 228 LTSE 231
Score = 43.1 bits (100), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 100/240 (41%), Gaps = 46/240 (19%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
++ D D A D +AL++ L P EL N++ + + T GR+++P
Sbjct: 34 LIIDTDPGADDVVALLFALASPEEL-NIRALTTVAGNVRLDKTSRNARLAREWAGREEVP 92
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V G PK P + YA+ I G L G+ P+
Sbjct: 93 VYAG--------APK-PLLRTPIYAENIHGKEG-------LSGVTVHEPKQ--------- 127
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVI 588
G ++ N AV+ +++ +P S ITI GP TNLA + L ++
Sbjct: 128 ---GLAKGN---------AVNYLIDTLKAAKPHS-ITIAMLGPQTNLA--LALIQEPDIV 172
Query: 589 QDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
Q + V G GN+ V AEFN++ DP AA+ V +S +++ +PL + ++
Sbjct: 173 QGIKEVVIMGGAHFNGGNITPV-----AEFNLYADPQAAEVVAKSGVKLTYLPLDVTHKI 227
>gi|417167606|ref|ZP_12000388.1| cytidine/uridine-specific hydrolase [Escherichia coli 99.0741]
gi|386171324|gb|EIH43369.1| cytidine/uridine-specific hydrolase [Escherichia coli 99.0741]
Length = 311
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP ++ TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPE--PTFAP-QKCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 107/264 (40%), Gaps = 67/264 (25%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV A G V P L R+L
Sbjct: 59 TDIPV------AGGAVKP-----------------------------LMREL------II 77
Query: 525 AENSVRFGASQDNDDPELRQPL-------AVDVW-KSIVESIEPGSKITILTNGPLTNLA 576
A+N D P L +P AV++ K++ ES EP +TI++ GP TN+A
Sbjct: 78 ADN---VHGESGLDGPALPEPTFAPQKCTAVELMAKTLRESAEP---VTIVSTGPQTNVA 131
Query: 577 QIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ S I + I+GG G N + AEFN+++DP AA+ VF+S +
Sbjct: 132 LLLNSHPELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGI 182
Query: 636 EIKLIPLHMQRRVASFFKILHKLR 659
+ + L + + + + R
Sbjct: 183 PVVMAGLDVTHKAQIHVEDTERFR 206
>gi|16764038|ref|NP_459653.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|167990670|ref|ZP_02571770.1| inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
gi|374978688|ref|ZP_09720030.1| Inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Typhimurium str.
TN061786]
gi|378444154|ref|YP_005231786.1| nucleoside hydrolase [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|378449017|ref|YP_005236376.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|378698613|ref|YP_005180570.1| nucleoside hydrolase [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|378983265|ref|YP_005246420.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|378988058|ref|YP_005251222.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|379699879|ref|YP_005241607.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|383495459|ref|YP_005396148.1| nucleoside hydrolase [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|422024798|ref|ZP_16371274.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm1]
gi|422029832|ref|ZP_16376082.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm2]
gi|427546319|ref|ZP_18926593.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm8]
gi|427562552|ref|ZP_18931354.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm9]
gi|427581453|ref|ZP_18936179.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm3]
gi|427603386|ref|ZP_18940953.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm4]
gi|427628017|ref|ZP_18945863.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm6]
gi|427651428|ref|ZP_18950618.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm10]
gi|427660049|ref|ZP_18955579.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm11]
gi|427665158|ref|ZP_18960323.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm12]
gi|427721486|ref|ZP_18965296.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm5]
gi|81523582|sp|Q8ZQY4.1|RIHA_SALTY RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|16419174|gb|AAL19612.1| putative purine nucleoside hydrolase [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|205330855|gb|EDZ17619.1| inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
gi|261245933|emb|CBG23735.1| probable nucleoside hydrolase [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267992395|gb|ACY87280.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301157261|emb|CBW16749.1| probable nucleoside hydrolase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312911693|dbj|BAJ35667.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|321226240|gb|EFX51291.1| Inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Typhimurium str.
TN061786]
gi|323128978|gb|ADX16408.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|332987605|gb|AEF06588.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|380462280|gb|AFD57683.1| putative nucleoside hydrolase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|414023058|gb|EKT06503.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm8]
gi|414023098|gb|EKT06541.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm1]
gi|414024873|gb|EKT08227.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm2]
gi|414036981|gb|EKT19783.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm9]
gi|414037932|gb|EKT20668.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm3]
gi|414041791|gb|EKT24348.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm4]
gi|414051363|gb|EKT33473.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm10]
gi|414052693|gb|EKT34724.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm6]
gi|414056888|gb|EKT38670.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm11]
gi|414061479|gb|EKT42880.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm12]
gi|414066995|gb|EKT47434.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm5]
Length = 311
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 60/128 (46%), Gaps = 33/128 (25%)
Query: 67 AFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEH 124
+F PQ G TA +++ + SA P+T+ G TN A+ L ++P L I
Sbjct: 96 SFAPQSG---------TAVELMAKTLRESAQPVTIVSTGPQTNVALLLNSHPELHTKIAR 146
Query: 125 IYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPV 184
I +MGGA+ ++GN P AEFNI+ DP AA V SGIPV
Sbjct: 147 IVIMGGAM-----------------ALGNW-----TPAAEFNIYVDPEAAEIVFQSGIPV 184
Query: 185 TIIPLDAT 192
+ LD T
Sbjct: 185 VMAGLDVT 192
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 105/257 (40%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + +K I S+ T+ V +L ++ R
Sbjct: 1 MALPIIIDCDPGHDDAIALVLALASPE--LEVKAITSSAGNQTPEKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 LDIPV------AGGAVKPLM----------------RELIIADNVHGESGLDGPALP--- 93
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
E S A Q EL K++ ES +P +TI++ GP TN+A ++
Sbjct: 94 --EPSF---APQSGTAVELMA-------KTLRESAQP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+ I + I+GG N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHTKIARIVIMGGAMALGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHAADIERFR 206
>gi|423202184|ref|ZP_17188763.1| hypothetical protein HMPREF1167_02346 [Aeromonas veronii AER39]
gi|404615336|gb|EKB12308.1| hypothetical protein HMPREF1167_02346 [Aeromonas veronii AER39]
Length = 322
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 72/122 (59%), Gaps = 17/122 (13%)
Query: 551 WKSIVESIE--PGSKITILTNGPLTNLAQIIGLQNSS---SVIQDVYIVGGNKGQDNEKG 605
W+ IVE+++ PG +IT++T GPLTNLA + LQ + S+++ V ++GG G + +G
Sbjct: 105 WQYIVEAVKAAPG-EITLVTIGPLTNLA--LALQQAPEIVSLVKQVVVMGGAFGVNGHRG 161
Query: 606 NVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFK--ILHKLRDRKK 663
NV + YAE N+ DP AA VF + + +I L + ++ SFF L +LRD+
Sbjct: 162 NV-----TPYAEANIHDDPDAADRVFTADWPVVIIGLDVTQQ--SFFSSAYLDELRDKAG 214
Query: 664 TP 665
P
Sbjct: 215 EP 216
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 69/160 (43%), Gaps = 23/160 (14%)
Query: 51 PVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNF 108
PVG V+ G + G AP +P A Q ++ A+ A P IT+ +G TN
Sbjct: 74 PVGPTTIVHGPSGFGD--MEAGEVTIAPDPRP-AWQYIVEAVKAAPGEITLVTIGPLTNL 130
Query: 109 AIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIF 168
A+ L P + ++ + VMGGA N + GN+ PYAE NI
Sbjct: 131 ALALQQAPEIVSLVKQVVVMGGAF------GVNGHR-------GNV-----TPYAEANIH 172
Query: 169 SDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERR 208
DP AA V + PV II LD T+ S + E +
Sbjct: 173 DDPDAADRVFTADWPVVIIGLDVTQQSFFSSAYLDELRDK 212
>gi|168240510|ref|ZP_02665442.1| inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL486]
gi|168820214|ref|ZP_02832214.1| inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|194447344|ref|YP_002044696.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|200390730|ref|ZP_03217341.1| inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
gi|386590590|ref|YP_006086990.1| Inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Heidelberg str. B182]
gi|409249106|ref|YP_006884941.1| probable nucleoside hydrolase [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|419727821|ref|ZP_14254789.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|419734124|ref|ZP_14261019.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|419740948|ref|ZP_14267662.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|419746047|ref|ZP_14272657.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|419747119|ref|ZP_14273672.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41565]
gi|421568713|ref|ZP_16014427.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00322]
gi|421577239|ref|ZP_16022827.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00325]
gi|421581829|ref|ZP_16027370.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00326]
gi|421585303|ref|ZP_16030802.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00328]
gi|421887662|ref|ZP_16318812.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|226739284|sp|B4TB65.1|RIHA_SALHS RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|194405648|gb|ACF65867.1| inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|199603175|gb|EDZ01721.1| inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
gi|205340015|gb|EDZ26779.1| inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL486]
gi|205343169|gb|EDZ29933.1| inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|320084934|emb|CBY94723.1| probable nucleoside hydrolase [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|379982814|emb|CCF91085.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|381293356|gb|EIC34522.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|381299311|gb|EIC40385.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|381301403|gb|EIC42459.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|381304695|gb|EIC45670.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|381320322|gb|EIC60981.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41565]
gi|383797634|gb|AFH44716.1| Inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Heidelberg str. B182]
gi|402515266|gb|EJW22680.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00326]
gi|402515827|gb|EJW23240.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00325]
gi|402529673|gb|EJW36905.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00322]
gi|402530200|gb|EJW37422.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00328]
Length = 311
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 60/128 (46%), Gaps = 33/128 (25%)
Query: 67 AFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEH 124
+F PQ G TA +++ + SA P+T+ G TN A+ L ++P L I
Sbjct: 96 SFAPQSG---------TAVELMAKTLRESAQPVTIVSTGPQTNVALLLNSHPELHTKIAR 146
Query: 125 IYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPV 184
I +MGGA+ ++GN P AEFNI+ DP AA V SGIPV
Sbjct: 147 IVIMGGAM-----------------ALGNW-----TPAAEFNIYVDPEAAEIVFQSGIPV 184
Query: 185 TIIPLDAT 192
+ LD T
Sbjct: 185 VMAGLDVT 192
Score = 46.6 bits (109), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 105/257 (40%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + +K I S+ T+ V +L ++ R
Sbjct: 1 MALPIIIDCDPGHDDAIALVLALASPE--LEVKAITSSAGNQTPEKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 PDIPV------AGGAVKPLM----------------RELIIADNVHGESGLDGPALP--- 93
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
E S A Q EL K++ ES +P +TI++ GP TN+A ++
Sbjct: 94 --EPSF---APQSGTAVELMA-------KTLRESAQP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+ I + I+GG N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHTKIARIVIMGGAMALGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHAADIERFR 206
>gi|242238885|ref|YP_002987066.1| inosine/uridine-preferring nucleoside hydrolase [Dickeya dadantii
Ech703]
gi|242130942|gb|ACS85244.1| Inosine/uridine-preferring nucleoside hydrolase [Dickeya dadantii
Ech703]
Length = 317
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 21/97 (21%)
Query: 96 PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY 155
PIT+ +G TN A+ L+ +P + K I I M A ++G+
Sbjct: 121 PITICAIGPMTNLALALIQHPDVAKGIRQIVTMSCAF----------------TALGH-- 162
Query: 156 PDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
P+AEFNI++DP AA+ V SGIP+ I+PLD T
Sbjct: 163 ---RTPWAEFNIYADPHAAHRVFFSGIPLVIMPLDVT 196
>gi|205351947|ref|YP_002225748.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|375122736|ref|ZP_09767900.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|445136575|ref|ZP_21383439.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9184]
gi|226739283|sp|B5R809.1|RIHA_SALG2 RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|205271728|emb|CAR36561.1| probable nucleoside hydrolase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|326626986|gb|EGE33329.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|444844922|gb|ELX70144.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9184]
Length = 311
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLNGPALPE--PSFAP-QSGTAVELMAKTLRESAQPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ ++GN P AEFNI+ DP AA
Sbjct: 138 PELHTKIARIVIMGGAM-----------------ALGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 107/264 (40%), Gaps = 67/264 (25%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + +K I S+ T+ V +L ++ R
Sbjct: 1 MALPIIIDCDPGHDDAIALVLALASPE--LEVKAITSSAGNQTPEKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV A G V P L R+L
Sbjct: 59 PDIPV------AGGAVKP-----------------------------LMREL------II 77
Query: 525 AENSVRFGASQDNDDPELRQP-------LAVDVW-KSIVESIEPGSKITILTNGPLTNLA 576
A+N G S N P L +P AV++ K++ ES +P +TI++ GP TN+A
Sbjct: 78 ADNV--HGESGLNG-PALPEPSFAPQSGTAVELMAKTLRESAQP---VTIVSTGPQTNVA 131
Query: 577 QIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ + I + I+GG N + AEFN+++DP AA+ VF+S +
Sbjct: 132 LLLNSHPELHTKIARIVIMGGAMALGN---------WTPAAEFNIYVDPEAAEIVFQSGI 182
Query: 636 EIKLIPLHMQRRVASFFKILHKLR 659
+ + L + + + + R
Sbjct: 183 PVVMAGLDVTHKAQIHAADIERFR 206
>gi|406677744|ref|ZP_11084924.1| hypothetical protein HMPREF1170_03132 [Aeromonas veronii AMC35]
gi|404623551|gb|EKB20401.1| hypothetical protein HMPREF1170_03132 [Aeromonas veronii AMC35]
Length = 322
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 72/122 (59%), Gaps = 17/122 (13%)
Query: 551 WKSIVESIE--PGSKITILTNGPLTNLAQIIGLQNSS---SVIQDVYIVGGNKGQDNEKG 605
W+ IVE+++ PG +IT++T GPLTNLA + LQ + S+++ V ++GG G + +G
Sbjct: 105 WQYIVEAVKAAPG-EITLVTIGPLTNLA--LALQQAPEIVSLVKQVVVMGGAFGVNGHRG 161
Query: 606 NVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFK--ILHKLRDRKK 663
NV + YAE N+ DP AA VF + + +I L + ++ SFF L +LRD+
Sbjct: 162 NV-----TPYAEANIHDDPDAADRVFTADWPVVIIGLDVTQQ--SFFSSAYLDELRDKAG 214
Query: 664 TP 665
P
Sbjct: 215 EP 216
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 69/160 (43%), Gaps = 23/160 (14%)
Query: 51 PVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNF 108
PVG V+ G + G AP +P A Q ++ A+ A P IT+ +G TN
Sbjct: 74 PVGPTTIVHGPSGFGD--MEAGEVTIAPDPRP-AWQYIVEAVKAAPGEITLVTIGPLTNL 130
Query: 109 AIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIF 168
A+ L P + ++ + VMGGA N + GN+ PYAE NI
Sbjct: 131 ALALQQAPEIVSLVKQVVVMGGAF------GVNGHR-------GNV-----TPYAEANIH 172
Query: 169 SDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERR 208
DP AA V + PV II LD T+ S + E +
Sbjct: 173 DDPDAADRVFTADWPVVIIGLDVTQQSFFSSAYLDELRDK 212
>gi|207856126|ref|YP_002242777.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|421357555|ref|ZP_15807863.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 622731-39]
gi|421365451|ref|ZP_15815673.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639016-6]
gi|421368774|ref|ZP_15818958.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 640631]
gi|421372223|ref|ZP_15822372.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-0424]
gi|421375833|ref|ZP_15825942.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-6]
gi|421380407|ref|ZP_15830469.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 485549-17]
gi|421385854|ref|ZP_15835870.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-22]
gi|421392270|ref|ZP_15842227.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-70]
gi|421396216|ref|ZP_15846148.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-26]
gi|421398871|ref|ZP_15848776.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-37]
gi|421404944|ref|ZP_15854779.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-46]
gi|421407547|ref|ZP_15857354.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-50]
gi|421411889|ref|ZP_15861652.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-1427]
gi|421419235|ref|ZP_15868927.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-2659]
gi|421424089|ref|ZP_15873740.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 78-1757]
gi|421425843|ref|ZP_15875478.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22510-1]
gi|421430190|ref|ZP_15879784.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 8b-1]
gi|421437019|ref|ZP_15886545.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648905 5-18]
gi|421439391|ref|ZP_15888882.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 6-18]
gi|421446067|ref|ZP_15895488.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-3079]
gi|421450982|ref|ZP_15900348.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 58-6482]
gi|436639145|ref|ZP_20516199.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22704]
gi|436796980|ref|ZP_20522926.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS44]
gi|436810810|ref|ZP_20529848.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1882]
gi|436813444|ref|ZP_20531632.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1884]
gi|436831169|ref|ZP_20535837.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1594]
gi|436849992|ref|ZP_20541129.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1566]
gi|436856404|ref|ZP_20545509.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1580]
gi|436863389|ref|ZP_20549932.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1543]
gi|436871866|ref|ZP_20555040.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1441]
gi|436879018|ref|ZP_20559437.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1810]
gi|436887133|ref|ZP_20563539.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1558]
gi|436894201|ref|ZP_20567679.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1018]
gi|436904327|ref|ZP_20574344.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1010]
gi|436910197|ref|ZP_20576782.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1729]
gi|436918449|ref|ZP_20581620.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0895]
gi|436925331|ref|ZP_20585763.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0899]
gi|436934489|ref|ZP_20590493.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1457]
gi|436941083|ref|ZP_20594643.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1747]
gi|436949073|ref|ZP_20599087.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0968]
gi|436959876|ref|ZP_20604073.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1444]
gi|436974909|ref|ZP_20611185.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1445]
gi|436987402|ref|ZP_20616046.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1559]
gi|436999939|ref|ZP_20620512.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1565]
gi|437007240|ref|ZP_20623188.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1808]
gi|437017946|ref|ZP_20626438.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1811]
gi|437035768|ref|ZP_20633694.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0956]
gi|437046382|ref|ZP_20638198.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1455]
gi|437049133|ref|ZP_20639753.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1575]
gi|437057054|ref|ZP_20644422.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1725]
gi|437065506|ref|ZP_20649191.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1745]
gi|437078715|ref|ZP_20656209.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1791]
gi|437081739|ref|ZP_20657814.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1795]
gi|437089763|ref|ZP_20662335.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 576709]
gi|437117372|ref|ZP_20669992.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 635290-58]
gi|437122336|ref|ZP_20672178.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-16]
gi|437132436|ref|ZP_20677886.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-19]
gi|437137542|ref|ZP_20680337.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-2]
gi|437148855|ref|ZP_20687728.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-9]
gi|437152187|ref|ZP_20689858.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629163]
gi|437161134|ref|ZP_20695207.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE15-1]
gi|437172991|ref|ZP_20701514.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_N202]
gi|437175239|ref|ZP_20702702.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_56-3991]
gi|437186442|ref|ZP_20709638.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_76-3618]
gi|437192754|ref|ZP_20710802.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13183-1]
gi|437259916|ref|ZP_20717436.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_81-2490]
gi|437272927|ref|ZP_20724677.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL909]
gi|437279297|ref|ZP_20727634.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL913]
gi|437293690|ref|ZP_20732224.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_69-4941]
gi|437306802|ref|ZP_20734444.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 638970-15]
gi|437323771|ref|ZP_20739505.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 17927]
gi|437340073|ref|ZP_20744336.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS4]
gi|437349308|ref|ZP_20747234.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22558]
gi|437421652|ref|ZP_20754941.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 22-17]
gi|437454079|ref|ZP_20759923.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 40-18]
gi|437469797|ref|ZP_20764812.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 1-1]
gi|437485486|ref|ZP_20769598.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 4-1]
gi|437496024|ref|ZP_20773084.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642046 4-7]
gi|437501863|ref|ZP_20774399.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648898 4-5]
gi|437534210|ref|ZP_20781243.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648899 3-17]
gi|437557923|ref|ZP_20785212.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648900 1-16]
gi|437578151|ref|ZP_20791398.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 1-17]
gi|437588516|ref|ZP_20793981.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|437602157|ref|ZP_20798164.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648902 6-8]
gi|437625567|ref|ZP_20805652.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648903 1-6]
gi|437626862|ref|ZP_20805778.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648904 3-6]
gi|437663522|ref|ZP_20814038.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 653049 13-19]
gi|437679710|ref|ZP_20818105.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 8-1]
gi|437692704|ref|ZP_20821281.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 9-7]
gi|437702754|ref|ZP_20824275.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 42-20]
gi|437731860|ref|ZP_20831480.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 16-16]
gi|437796919|ref|ZP_20837651.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 76-2651]
gi|437801611|ref|ZP_20838209.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 33944]
gi|437851947|ref|ZP_20847432.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 6.0562-1]
gi|438076507|ref|ZP_20857354.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-5646]
gi|438088126|ref|ZP_20859585.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 81-2625]
gi|438105574|ref|ZP_20866192.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 62-1976]
gi|438112807|ref|ZP_20869296.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 53-407]
gi|445170107|ref|ZP_21395593.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE8a]
gi|445215326|ref|ZP_21401888.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 20037]
gi|445227170|ref|ZP_21404177.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE10]
gi|445324655|ref|ZP_21412218.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 18569]
gi|445343317|ref|ZP_21416786.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13-1]
gi|445354395|ref|ZP_21421294.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. PT23]
gi|226739282|sp|B5QVR2.1|RIHA_SALEP RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|206707929|emb|CAR32218.1| probable nucleoside hydrolase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|395980962|gb|EJH90185.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639016-6]
gi|395983069|gb|EJH92262.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 640631]
gi|395989792|gb|EJH98924.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 622731-39]
gi|395999873|gb|EJI08888.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-0424]
gi|396003060|gb|EJI12048.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-6]
gi|396003456|gb|EJI12443.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 485549-17]
gi|396007831|gb|EJI16766.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-70]
gi|396011260|gb|EJI20171.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-26]
gi|396015337|gb|EJI24219.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-22]
gi|396024255|gb|EJI33041.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-46]
gi|396029479|gb|EJI38215.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-50]
gi|396030661|gb|EJI39395.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-37]
gi|396035375|gb|EJI44047.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-2659]
gi|396036137|gb|EJI44808.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 78-1757]
gi|396044137|gb|EJI52734.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-1427]
gi|396052339|gb|EJI60847.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648905 5-18]
gi|396057114|gb|EJI65587.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22510-1]
gi|396057507|gb|EJI65979.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 8b-1]
gi|396063737|gb|EJI72125.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 58-6482]
gi|396064502|gb|EJI72889.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-3079]
gi|396071597|gb|EJI79922.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 6-18]
gi|434956922|gb|ELL50613.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22704]
gi|434961052|gb|ELL54370.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS44]
gi|434965302|gb|ELL58265.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1882]
gi|434974952|gb|ELL67262.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1884]
gi|434982126|gb|ELL73949.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1594]
gi|434988569|gb|ELL80168.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1566]
gi|434991837|gb|ELL83325.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1580]
gi|434997916|gb|ELL89155.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1543]
gi|435001081|gb|ELL92203.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1441]
gi|435007694|gb|ELL98547.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1810]
gi|435011665|gb|ELM02385.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1558]
gi|435016849|gb|ELM07357.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1010]
gi|435018015|gb|ELM08490.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1018]
gi|435028570|gb|ELM18649.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1729]
gi|435031181|gb|ELM21170.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0895]
gi|435039724|gb|ELM29493.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0899]
gi|435041629|gb|ELM31371.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1457]
gi|435044914|gb|ELM34559.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1747]
gi|435049860|gb|ELM39365.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1445]
gi|435053771|gb|ELM43207.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0968]
gi|435054541|gb|ELM43976.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1444]
gi|435059983|gb|ELM49258.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1559]
gi|435060480|gb|ELM49750.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1565]
gi|435069152|gb|ELM58155.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1808]
gi|435075135|gb|ELM63958.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0956]
gi|435077852|gb|ELM66596.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1455]
gi|435081538|gb|ELM70179.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1811]
gi|435096572|gb|ELM84844.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1725]
gi|435096671|gb|ELM84933.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1575]
gi|435100154|gb|ELM88345.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1745]
gi|435101071|gb|ELM89225.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1791]
gi|435110907|gb|ELM98812.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1795]
gi|435113744|gb|ELN01590.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 635290-58]
gi|435114781|gb|ELN02571.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 576709]
gi|435121983|gb|ELN09505.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-19]
gi|435123162|gb|ELN10655.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-16]
gi|435130664|gb|ELN17892.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-9]
gi|435134176|gb|ELN21304.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-2]
gi|435143660|gb|ELN30526.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629163]
gi|435144068|gb|ELN30922.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_N202]
gi|435146647|gb|ELN33440.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE15-1]
gi|435156897|gb|ELN43364.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_56-3991]
gi|435158446|gb|ELN44842.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_76-3618]
gi|435165304|gb|ELN51364.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_81-2490]
gi|435168259|gb|ELN54112.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL909]
gi|435171453|gb|ELN57089.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL913]
gi|435179975|gb|ELN65091.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_69-4941]
gi|435186790|gb|ELN71603.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 638970-15]
gi|435194822|gb|ELN79250.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 17927]
gi|435194865|gb|ELN79284.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS4]
gi|435200468|gb|ELN84453.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 22-17]
gi|435207868|gb|ELN91299.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 40-18]
gi|435214682|gb|ELN97430.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 1-1]
gi|435215085|gb|ELN97826.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22558]
gi|435216661|gb|ELN99136.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 4-1]
gi|435226272|gb|ELO07851.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642046 4-7]
gi|435231031|gb|ELO12292.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13183-1]
gi|435238358|gb|ELO19004.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648898 4-5]
gi|435240075|gb|ELO20495.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648900 1-16]
gi|435241359|gb|ELO21710.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648899 3-17]
gi|435242086|gb|ELO22398.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 1-17]
gi|435253386|gb|ELO32874.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648903 1-6]
gi|435258032|gb|ELO37309.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|435259845|gb|ELO39058.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648902 6-8]
gi|435266385|gb|ELO45144.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 653049 13-19]
gi|435272404|gb|ELO50806.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 8-1]
gi|435279585|gb|ELO57345.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 9-7]
gi|435286358|gb|ELO63634.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648904 3-6]
gi|435288657|gb|ELO65653.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 16-16]
gi|435290263|gb|ELO67200.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 76-2651]
gi|435294185|gb|ELO70831.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 42-20]
gi|435304012|gb|ELO79827.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 33944]
gi|435310036|gb|ELO84600.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-5646]
gi|435317833|gb|ELO90840.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 81-2625]
gi|435321263|gb|ELO93678.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 62-1976]
gi|435329922|gb|ELP01214.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 53-407]
gi|435338020|gb|ELP07435.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 6.0562-1]
gi|444859221|gb|ELX84174.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 20037]
gi|444862743|gb|ELX87585.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE8a]
gi|444867147|gb|ELX91847.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE10]
gi|444881121|gb|ELY05165.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13-1]
gi|444881886|gb|ELY05886.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. 18569]
gi|444887485|gb|ELY11178.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. PT23]
Length = 311
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLNGPALPE--PSFAP-QSGTAVELMAKTLRESAQPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ ++GN P AEFNI+ DP AA
Sbjct: 138 PELHTKIARIVIMGGAM-----------------ALGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 107/264 (40%), Gaps = 67/264 (25%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + +K I S+ T+ V +L ++ R
Sbjct: 1 MALPIIIDCDPGHDDAIALVLALASPE--LEVKAITSSAGNQTPEKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV A G V P L R+L
Sbjct: 59 PDIPV------AGGAVKP-----------------------------LMREL------II 77
Query: 525 AENSVRFGASQDNDDPELRQP-------LAVDVW-KSIVESIEPGSKITILTNGPLTNLA 576
A+N G S N P L +P AV++ K++ ES +P +TI++ GP TN+A
Sbjct: 78 ADNV--HGESGLNG-PALPEPSFAPQSGTAVELMAKTLRESAQP---VTIVSTGPQTNVA 131
Query: 577 QIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ + I + I+GG N + AEFN+++DP AA+ VF+S +
Sbjct: 132 LLLNSHPELHTKIARIVIMGGAMALGN---------WTPAAEFNIYVDPEAAEIVFQSGI 182
Query: 636 EIKLIPLHMQRRVASFFKILHKLR 659
+ + L + + + + R
Sbjct: 183 PVVMAGLDVTHKAQIHAADIERFR 206
>gi|433609002|ref|YP_007041371.1| Inosine/uridine-preferring nucleoside hydrolase [Saccharothrix
espanaensis DSM 44229]
gi|407886855|emb|CCH34498.1| Inosine/uridine-preferring nucleoside hydrolase [Saccharothrix
espanaensis DSM 44229]
Length = 315
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 63/138 (45%), Gaps = 24/138 (17%)
Query: 69 LPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVM 128
LP+ R P T + L+ A P+T+ +G TN A+ L +P L+ I + VM
Sbjct: 94 LPEPTRGPDPRDAVTLLKDLLTAADR-PVTIAPIGPLTNIALLLAAHPGLRAKIARLVVM 152
Query: 129 GGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSG-IPVTII 187
GG IR GN+ AEFN++ DP AA VL +PVT++
Sbjct: 153 GGGIRG-----------------GNV-----TAAAEFNLWCDPEAARRVLVGAEVPVTLV 190
Query: 188 PLDATKTIPVSENFFVEF 205
P+D T+ VS + E
Sbjct: 191 PMDLTRRCAVSAAWLAEL 208
Score = 46.2 bits (108), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 103/257 (40%), Gaps = 52/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D AL P ++L G+ + T +L ++ R
Sbjct: 1 MTTPLIIDTDPGVDDAFALALAAASPE--VDLIGVTTVFGNVSPELTTRNALRVLALLDR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
+D+PV A G P P A SD L G A LP R
Sbjct: 59 EDVPV------AAGAARPLVHPQPHVSKAHG----------SDGLSGFADTLPEPTR--- 99
Query: 525 AENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS 584
P+ R AV + K ++ + + +TI GPLTN+A ++
Sbjct: 100 --------------GPDPRD--AVTLLKDLLTAAD--RPVTIAPIGPLTNIALLLAAHPG 141
Query: 585 --SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVF-ESKLEIKLIP 641
+ + + V + GG +G GNV + AEFN++ DP AA+ V +++ + L+P
Sbjct: 142 LRAKIARLVVMGGGIRG-----GNV-----TAAAEFNLWCDPEAARRVLVGAEVPVTLVP 191
Query: 642 LHMQRRVASFFKILHKL 658
+ + RR A L +L
Sbjct: 192 MDLTRRCAVSAAWLAEL 208
>gi|387929208|ref|ZP_10131885.1| ribosylpyrimidine nucleosidase [Bacillus methanolicus PB1]
gi|387586026|gb|EIJ78350.1| ribosylpyrimidine nucleosidase [Bacillus methanolicus PB1]
Length = 304
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 55/111 (49%), Gaps = 25/111 (22%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
+T+ +G TN A+ + + P + IE + +MGGA CF GN
Sbjct: 119 VTIVAIGPLTNVALLVKSYPEVVHKIEQLSIMGGA----CFG-------------GN--- 158
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFER 207
P AEFNI+ DP AA V +SGIP+T+ LD T +P+ F E ER
Sbjct: 159 --CTPVAEFNIYVDPEAAQIVFNSGIPITMFGLDVTHQVPM---FKEEIER 204
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 102/261 (39%), Gaps = 61/261 (23%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M KP++ D D D LA+ LL E +++K I + L+ +G
Sbjct: 1 MSKPIIIDCDPGIDDALAI--LLAFASEELDVKLITTCAGNQTIEKITSNALKLVSFIGE 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
+ I V A G P L RDL +P
Sbjct: 59 EQIEV------AKGADKP-----------------------------LLRDLVIAPE--- 80
Query: 525 AENSVRFGASQDNDDPELRQPLAVDVWKSIVESIE-----PGSKITILTNGPLTNLAQII 579
A FG + EL +P+ +S +E++ K+TI+ GPLTN+A ++
Sbjct: 81 AHGESGFG------EVELGEPICSVSKRSALEAMRDVIFTSDQKVTIVAIGPLTNVALLV 134
Query: 580 -GLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIK 638
I+ + I+GG F + AEFN+++DP AA+ VF S + I
Sbjct: 135 KSYPEVVHKIEQLSIMGGA---------CFGGNCTPVAEFNIYVDPEAAQIVFNSGIPIT 185
Query: 639 LIPLHMQRRVASFFKILHKLR 659
+ L + +V F + + ++R
Sbjct: 186 MFGLDVTHQVPMFKEEIERIR 206
>gi|378955955|ref|YP_005213442.1| putative nucleoside hydrolase [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|438144505|ref|ZP_20875503.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Pullorum str. ATCC 9120]
gi|357206566|gb|AET54612.1| putative nucleoside hydrolase [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|434939232|gb|ELL46093.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Pullorum str. ATCC 9120]
Length = 311
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLNGPALPE--PSFAP-QSGTAVELMAKTLRESAQPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ ++GN P AEFNI+ DP AA
Sbjct: 138 PELHTKIARIVIMGGAM-----------------ALGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 107/264 (40%), Gaps = 67/264 (25%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + +K I S+ T+ V +L ++ R
Sbjct: 1 MALPIIIDCDPGHDDAIALVLALASPE--LEVKAITSSAGNQTPEKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV A G V P L R+L
Sbjct: 59 PDIPV------AGGAVKP-----------------------------LMREL------II 77
Query: 525 AENSVRFGASQDNDDPELRQP-------LAVDVW-KSIVESIEPGSKITILTNGPLTNLA 576
A+N G S N P L +P AV++ K++ ES +P +TI++ GP TN+A
Sbjct: 78 ADNV--HGESGLNG-PALPEPSFAPQSGTAVELMAKTLRESAQP---VTIVSTGPQTNVA 131
Query: 577 QIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ + I + I+GG N + AEFN+++DP AA+ VF+S +
Sbjct: 132 LLLNSHPELHTKIARIVIMGGAMALGN---------WTPAAEFNIYVDPEAAEIVFQSGI 182
Query: 636 EIKLIPLHMQRRVASFFKILHKLR 659
+ + L + + + + R
Sbjct: 183 PVVMAGLDVTHKAQIHAADIERFR 206
>gi|302384930|ref|YP_003820752.1| inosine/uridine-preferring nucleoside hydrolase [Clostridium
saccharolyticum WM1]
gi|302195558|gb|ADL03129.1| Inosine/uridine-preferring nucleoside hydrolase [Clostridium
saccharolyticum WM1]
Length = 314
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 27/171 (15%)
Query: 56 LYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAIS-AGPITVFVMGSHTNFAIFLMN 114
++++ + G+ LP+ +K PL + A ++ A G +T+ +G TN A L
Sbjct: 80 VHIHGDNGIGNVELPESEQK--PLNEDAADFIIKKAEELKGDLTIVALGRLTNIAAALEK 137
Query: 115 NPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAA 174
+P L I+H+ VMGGA P + +PYAE NI+ D A+
Sbjct: 138 DPRLPYKIKHMVVMGGAFHK---------------------PGNISPYAEANIYGDAKAS 176
Query: 175 YTVLHSGIPVTIIPLDATKTIPVSE---NFFVEFERRQNTYEAQYCFQSLK 222
V +G P+T++ LD T +S ++ R +N QY +L+
Sbjct: 177 DIVFRAGFPMTVVGLDVTMETFLSARDITLLCKYCREENREVVQYIQSALE 227
>gi|365925784|ref|ZP_09448547.1| ribonucleoside hydrolase 1 [Lactobacillus mali KCTC 3596 = DSM
20444]
gi|420265128|ref|ZP_14767709.1| ribonucleoside hydrolase 1 [Lactobacillus mali KCTC 3596 = DSM
20444]
gi|394428788|gb|EJF01291.1| ribonucleoside hydrolase 1 [Lactobacillus mali KCTC 3596 = DSM
20444]
Length = 309
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 70/148 (47%), Gaps = 31/148 (20%)
Query: 51 PVGQRLYVNTNY----GLRKAFLPQGGRKYAPLRQPTAQQV--LINAISAGPITVFVMGS 104
P+ Q L + N GL A LP+ +AP+ P Q + +N+ S P+T+ V G
Sbjct: 69 PLIQDLIIAENVHGKTGLDGAVLPE--PDFAPVNIPAVQLIAETLNS-SIDPVTLVVTGP 125
Query: 105 HTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAE 164
TN A+FL P LK IE I MGGA+ + + P +E
Sbjct: 126 MTNIALFLQIYPQLKTKIEQIVFMGGAMNTGNY----------------------TPSSE 163
Query: 165 FNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
FNI DP +A V++SGIP+ + L+ T
Sbjct: 164 FNIAVDPESAKIVINSGIPLVMAGLNLT 191
>gi|148656752|ref|YP_001276957.1| inosine/uridine-preferring nucleoside hydrolase [Roseiflexus sp.
RS-1]
gi|148568862|gb|ABQ91007.1| Inosine/uridine-preferring nucleoside hydrolase [Roseiflexus sp.
RS-1]
Length = 338
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 21/105 (20%)
Query: 95 GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNL 154
G +T+ + TN AI L P + + + +MGGA+R+D GN
Sbjct: 117 GEVTLVAVAPLTNVAIALRKEPRIINAVRQVIIMGGALRTD----------------GN- 159
Query: 155 YPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSE 199
+ AEFN + DP AA+ VL SG+P+T++P D TK I +++
Sbjct: 160 ----TTSLAEFNFYVDPHAAHIVLESGMPITLLPWDITKDIILTQ 200
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 99/247 (40%), Gaps = 54/247 (21%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M V+ D D D LA++ P + L G+ V+S + V ++L + GR
Sbjct: 1 MTTRVILDTDPGIDDSLAILLAAASPE--VELAGVTVTSGNCPMADGVRNARNVLALAGR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV GG PL + +T G A P T
Sbjct: 59 PDIPV-----------------CGGVALPLIRPLYTAPETHGETGIGFAH-----PPEST 96
Query: 525 AENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS 584
A S G VD+ I E +E ++T++ PLTN+A I L+
Sbjct: 97 APVSTEHG---------------VDLI--IREILEHPGEVTLVAVAPLTNVA--IALRKE 137
Query: 585 SSVI---QDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
+I + V I+GG D GN ++ AEFN ++DP AA V ES + I L+P
Sbjct: 138 PRIINAVRQVIIMGGALRTD---GN-----TTSLAEFNFYVDPHAAHIVLESGMPITLLP 189
Query: 642 LHMQRRV 648
+ + +
Sbjct: 190 WDITKDI 196
>gi|197265056|ref|ZP_03165130.1| inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA23]
gi|197243311|gb|EDY25931.1| inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA23]
Length = 311
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 60/128 (46%), Gaps = 33/128 (25%)
Query: 67 AFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEH 124
+F PQ G TA +++ + SA P+T+ G TN A+ L ++P L I
Sbjct: 96 SFAPQSG---------TAVELMAKTLRESAQPVTIVSTGPQTNVALLLNSHPELHTKIAR 146
Query: 125 IYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPV 184
I +MGGA+ ++GN P AEFNI+ DP AA V SGIPV
Sbjct: 147 IVIMGGAM-----------------ALGNW-----TPAAEFNIYVDPEAAEIVFQSGIPV 184
Query: 185 TIIPLDAT 192
+ LD T
Sbjct: 185 VMAGLDVT 192
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 105/257 (40%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + +K I S+ T+ V +L ++ R
Sbjct: 1 MALPIIIDCDPGHDDAIALVLALASPE--LEVKAITSSAGNQTPEKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 LDIPV------AGGAVKPLM----------------RELIIADNVHGESGLDGPALP--- 93
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
E S A Q EL K++ ES +P +TI++ GP TN+A ++
Sbjct: 94 --EPSF---APQSGTAVELMA-------KTLRESAQP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+ I + I+GG N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHTKIARIVIMGGAMALGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHAADIERFR 206
>gi|157160139|ref|YP_001457457.1| ribonucleoside hydrolase 1 [Escherichia coli HS]
gi|166977468|sp|A7ZXS0.1|RIHA_ECOHS RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|157065819|gb|ABV05074.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
HS]
Length = 311
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA PIT+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPEPA--FAP-QNCTAVELMAKTLRESAEPITIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 107/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAVKPLMREL----------------IIADNVHGESGLDGPALPEPA 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES EP ITI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVELMA-------KTLRESAEP---ITIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ R + + R
Sbjct: 190 DVTHRAQIHVEDTERFR 206
>gi|410636402|ref|ZP_11346996.1| purine nucleosidase [Glaciecola lipolytica E3]
gi|410144014|dbj|GAC14201.1| purine nucleosidase [Glaciecola lipolytica E3]
Length = 325
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 27/156 (17%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
+TV + G TN + + P +K+ IE + MGGA+ D GN+
Sbjct: 135 VTVLMTGPSTNLIAAIESQPDIKEAIEQVVWMGGAV----------------DVPGNVAM 178
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQ----NTY 212
+ + AE+N + DP A+ ++ SG+ + +I LDAT +PV+ +F + ++ ++
Sbjct: 179 YNHDKSAEWNAYWDPTASQKLIASGLNIKLISLDATNCLPVNVDFLSQLAAQKHYPISSL 238
Query: 213 EAQYCFQSLKMIRDTWSGSPPFHEAYCMWDSFMAGV 248
Q+ ++ I P + Y MWD V
Sbjct: 239 ACQFWATTINTI-------PSYEFTYFMWDVLATSV 267
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 99/260 (38%), Gaps = 46/260 (17%)
Query: 458 LLHMMGRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLP 517
+L M GR ++PVGLG++ V FP +A P D T
Sbjct: 67 ILAMFGRKNVPVGLGNIHGVN----AFPADW-----RAQPKICNVLPDMLT--------- 108
Query: 518 RSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQ 577
++Y DP+ L D I + +T+L GP TNL
Sbjct: 109 ---QQY---------------DPQQVSDLQADA--LIKSCLSTNQDVTVLMTGPSTNLIA 148
Query: 578 IIGLQ-NSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLE 636
I Q + I+ V +GG + GNV K AE+N + DP A++ + S L
Sbjct: 149 AIESQPDIKEAIEQVVWMGGAV---DVPGNVAMYNHDKSAEWNAYWDPTASQKLIASGLN 205
Query: 637 IKLIPLHMQRRVASFFKILHKLRDRKKTP-ESVFSQRLLQGLMTLQQSHHSYHHVDTFLG 695
IKLI L + L +L +K P S+ Q + T+ +Y D
Sbjct: 206 IKLISLDATNCLPVNVDFLSQLAAQKHYPISSLACQFWATTINTIPSYEFTYFMWDVLAT 265
Query: 696 EVLGAVILGGNPHLNQTYKI 715
VLG L GN QT KI
Sbjct: 266 SVLG---LQGNEIEFQTVKI 282
>gi|422804624|ref|ZP_16853056.1| inosine-uridine nucleoside hydrolase [Escherichia fergusonii B253]
gi|324114772|gb|EGC08740.1| inosine-uridine nucleoside hydrolase [Escherichia fergusonii B253]
Length = 311
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP ++ TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPE--PTFAP-QKCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 107/264 (40%), Gaps = 67/264 (25%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV A G V P L R+L
Sbjct: 59 TDIPV------AGGAVKP-----------------------------LMREL------II 77
Query: 525 AENSVRFGASQDNDDPELRQPL-------AVDVW-KSIVESIEPGSKITILTNGPLTNLA 576
A+N D P L +P AV++ K++ ES EP +TI++ GP TN+A
Sbjct: 78 ADN---VHGESGLDGPALPEPTFAPQKCTAVELMAKTLRESAEP---VTIVSTGPQTNVA 131
Query: 577 QIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ S I + I+GG G N + AEFN+++DP AA+ VF+S +
Sbjct: 132 LLLNSHPELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGI 182
Query: 636 EIKLIPLHMQRRVASFFKILHKLR 659
+ + L + + + + R
Sbjct: 183 PVVMAGLDVTHKAQIHVEDTERFR 206
>gi|399992347|ref|YP_006572587.1| pyrimidine-specific ribonucleoside hydrolase RihA [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
gi|398656902|gb|AFO90868.1| pyrimidine-specific ribonucleoside hydrolase RihA [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
Length = 313
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 31/176 (17%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
++G +T+ +G TN A P + ++ I +MGGA +G
Sbjct: 118 ASGTVTLCPLGPLTNIAAAFQKAPDIVDRVQEIVLMGGAYFE----------------VG 161
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTY 212
N+ P AEFNI+ DP AA VL SG+PVT++PLD T ++ VE R +T
Sbjct: 162 NI-----TPAAEFNIYVDPEAAAAVLTSGVPVTMMPLDVTHK-ALATRARVEKIRALDTK 215
Query: 213 EAQYCFQSLKM-----IRDTWSGSPPFHE----AYCMWDSFMAGVALSIMLNSSSH 259
A++ + L + S P H+ AY + +G +++++ ++S
Sbjct: 216 VARFTAEMLDFFERFDVEKYGSEGGPLHDPCVIAYLIRPELFSGRTINVVVETTSE 271
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 65/131 (49%), Gaps = 19/131 (14%)
Query: 538 DDPELRQPL----AVDVWKSIVESI--EPGSKITILTNGPLTNLAQIIGLQNSSSVI--- 588
D PEL P A I+ES+ E +T+ GPLTN+A Q + ++
Sbjct: 90 DGPELWDPTMPLAATHGVDFIIESLRREASGTVTLCPLGPLTNIAA--AFQKAPDIVDRV 147
Query: 589 QDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
Q++ ++GG E GN+ + AEFN+++DP AA AV S + + ++PL + +
Sbjct: 148 QEIVLMGGAY---FEVGNI-----TPAAEFNIYVDPEAAAAVLTSGVPVTMMPLDVTHKA 199
Query: 649 ASFFKILHKLR 659
+ + K+R
Sbjct: 200 LATRARVEKIR 210
>gi|16759613|ref|NP_455230.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29142614|ref|NP_805956.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|161615121|ref|YP_001589086.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|168264406|ref|ZP_02686379.1| inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Hadar str. RI_05P066]
gi|213052446|ref|ZP_03345324.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213425082|ref|ZP_03357832.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213647378|ref|ZP_03377431.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|378960378|ref|YP_005217864.1| pyrimidine-specific ribonucleoside hydrolase rihA [Salmonella
enterica subsp. enterica serovar Typhi str. P-stx-12]
gi|81515344|sp|Q8Z8H0.1|RIHA_SALTI RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|189040111|sp|A9MUJ0.1|RIHA_SALPB RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|25321069|pir||AB0583 probable nucleoside hydrolase [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16501905|emb|CAD05132.1| probable nucleoside hydrolase [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29138245|gb|AAO69816.1| probable nucleoside hydrolase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|161364485|gb|ABX68253.1| hypothetical protein SPAB_02889 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|205347090|gb|EDZ33721.1| inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Hadar str. RI_05P066]
gi|374354250|gb|AEZ46011.1| Pyrimidine-specific ribonucleoside hydrolase rihA [Salmonella
enterica subsp. enterica serovar Typhi str. P-stx-12]
Length = 311
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 60/128 (46%), Gaps = 33/128 (25%)
Query: 67 AFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEH 124
+F PQ G TA +++ + SA P+T+ G TN A+ L ++P L I
Sbjct: 96 SFAPQSG---------TAVELMAKTLRESAQPVTIVSTGPQTNVALLLNSHPELHTKIAR 146
Query: 125 IYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPV 184
I +MGGA+ ++GN P AEFNI+ DP AA V SGIPV
Sbjct: 147 IVIMGGAM-----------------ALGNW-----TPAAEFNIYVDPEAAEIVFQSGIPV 184
Query: 185 TIIPLDAT 192
+ LD T
Sbjct: 185 VMAGLDVT 192
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 111/271 (40%), Gaps = 53/271 (19%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + +K I S+ T+ V +L ++ R
Sbjct: 1 MALPIIIDCDPGHDDAIALVLALASPE--LEVKAITSSAGNQTPEKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 PDIPV------AGGAVKPLM----------------RELIIADNVHGESGLDGPALP--- 93
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
E S A Q EL K++ ES +P +TI++ GP TN+A ++
Sbjct: 94 --EPSF---APQSGTAVELMA-------KTLRESAQP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+ I + I+GG N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHTKIARIVIMGGAMALGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLRDRKKTPESVFSQRL 673
+ + + + RD ++ ++ L
Sbjct: 190 DVTHKAQIHAADIERFRDIGNPISTIVAELL 220
>gi|373463947|ref|ZP_09555525.1| cytidine/uridine-specific hydrolase [Lactobacillus kisonensis
F0435]
gi|371763654|gb|EHO52115.1| cytidine/uridine-specific hydrolase [Lactobacillus kisonensis
F0435]
Length = 310
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL A LP + P + P A +++ I S IT+ V G TN A+FL
Sbjct: 80 VHGKSGLDGAELPDP--DFEPQKMP-AIELMAKTIRESDEKITLVVTGPMTNAALFLRVY 136
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L IE I MGGA+ +GN P EFNIF DP AA
Sbjct: 137 PELMAKIERIVFMGGAM-----------------GLGNW-----TPSVEFNIFVDPEAAK 174
Query: 176 TVLHSGIPVTIIPLDAT 192
VL+SGIP+T+ PL+ T
Sbjct: 175 IVLNSGIPLTMAPLNVT 191
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 115/280 (41%), Gaps = 58/280 (20%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
++ D D D LA++ + P I+L + S+ T++ +L +M ++IP
Sbjct: 4 IILDCDPGHDDALAMMLAIVSPK--IDLAAVTTSAGNQTPEKTLNNAMRMLTLMKHEEIP 61
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V G+ K P + + A + SG LD
Sbjct: 62 VASGN---------KTPLLRPLRTAGNVHGKSG--LD----------------------- 87
Query: 529 VRFGASQDNDDPELRQPLAVDVW-KSIVESIEPGSKITILTNGPLTNLAQIIGL-QNSSS 586
GA + D E ++ A+++ K+I ES E KIT++ GP+TN A + + +
Sbjct: 88 ---GAELPDPDFEPQKMPAIELMAKTIRESDE---KITLVVTGPMTNAALFLRVYPELMA 141
Query: 587 VIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQR 646
I+ + +GG G N +V EFN+F+DP AAK V S + + + PL++
Sbjct: 142 KIERIVFMGGAMGLGNWTPSV---------EFNIFVDPEAAKIVLNSGIPLTMAPLNVTH 192
Query: 647 RVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHS 686
+ + K+ D K F GL+ + +H
Sbjct: 193 KAQILKSEITKINDIKNPVAHAF-----YGLLEFFERYHE 227
>gi|398812035|ref|ZP_10570816.1| Inosine-uridine nucleoside N-ribohydrolase [Variovorax sp. CF313]
gi|398079252|gb|EJL70119.1| Inosine-uridine nucleoside N-ribohydrolase [Variovorax sp. CF313]
Length = 323
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 83/199 (41%), Gaps = 39/199 (19%)
Query: 78 PLRQPTAQQVLINAISAGP---ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
PL A L+ + A P +T+ ++G TN A+ L P + + + + +M GA
Sbjct: 108 PLADGHAVDYLVRTLRAAPEKSVTLAMLGPQTNLALALEQAPDIVRGLRELVLMAGA--- 164
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTV-LHSGIPVTIIPLDATK 193
FN N + P AEFN+F+DP AA V L SG+P+T++PLD T
Sbjct: 165 -HFNGGNIT-----------------PVAEFNVFADPHAAEAVLLKSGVPITMLPLDVTH 206
Query: 194 TIPVSENFFVEFERRQNTYEA-------QYCFQSLKMIRDTWSGSPPFHE----AYCMWD 242
I S+ N A Y Q +K D G P H+ AY +
Sbjct: 207 KILTSDERVARLRGLGNRAGAIVADILDAYAPQEMKHY-DMPGG--PVHDATVTAYLLQP 263
Query: 243 SFMAGVALSIMLNSSSHNG 261
S G + + ++S G
Sbjct: 264 SLFKGRRIHVEVDSREGMG 282
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 8/101 (7%)
Query: 560 PGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFN 619
P +T+ GP TNLA + L+ + +++ + + G GN+ V AEFN
Sbjct: 126 PEKSVTLAMLGPQTNLA--LALEQAPDIVRGLRELVLMAGAHFNGGNITPV-----AEFN 178
Query: 620 MFLDPLAAKAV-FESKLEIKLIPLHMQRRVASFFKILHKLR 659
+F DP AA+AV +S + I ++PL + ++ + + + +LR
Sbjct: 179 VFADPHAAEAVLLKSGVPITMLPLDVTHKILTSDERVARLR 219
>gi|405379738|ref|ZP_11033585.1| Inosine-uridine nucleoside N-ribohydrolase [Rhizobium sp. CF142]
gi|397323768|gb|EJJ28159.1| Inosine-uridine nucleoside N-ribohydrolase [Rhizobium sp. CF142]
Length = 326
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 25/155 (16%)
Query: 91 AISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDS 150
A++ IT+ +G TN A+ L+ +P + + I I MGGA +
Sbjct: 116 AMAGEQITICAIGPMTNVALALIQHPDVARGIRQIVSMGGAF----------------TA 159
Query: 151 IGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQN 210
+G+ P+AEFN+++DP AA V SG+P+ ++PLD T + F F
Sbjct: 160 LGH-----RTPWAEFNVYADPHAAEIVFQSGVPIVLMPLDMTFQALFTTEHFERFRAGGE 214
Query: 211 TYEAQY-CFQSLKMIRDTWSGSP--PFHEAYCM-W 241
A + F + + G P P H+A + W
Sbjct: 215 AGAALFNLFSTFDRSDEKRFGRPGGPIHDATTIAW 249
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 99/238 (41%), Gaps = 50/238 (21%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
V+ D D D A++ L P I + G+ + + TV L+ + GR D+P
Sbjct: 6 VIIDADPGVDDAAAILMALASPE--IEVLGLSIVAGNVPLRDTVTNACKLMALSGRGDVP 63
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V G A G P + Y K +G+ DTL +P EN+
Sbjct: 64 VHAG---ASG------PLVRDQVYGKYASIGA----FDDTLVKAGDVVPAH------ENA 104
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVI 588
V+F + ++ + G +ITI GP+TN+A ++I
Sbjct: 105 VQF------------------IVRTARAAAMAGEQITICAIGPMTNVAL--------ALI 138
Query: 589 QDVYIVGGNKGQDNEKGNVFTVPSSK--YAEFNMFLDPLAAKAVFESKLEIKLIPLHM 644
Q + G + Q G FT + +AEFN++ DP AA+ VF+S + I L+PL M
Sbjct: 139 QHPDVARGIR-QIVSMGGAFTALGHRTPWAEFNVYADPHAAEIVFQSGVPIVLMPLDM 195
>gi|117621229|ref|YP_856004.1| ribonucleoside hydrolase 1 [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117562636|gb|ABK39584.1| inosine-uridine preferring nucleoside hydrolase superfamily
[Aeromonas hydrophila subsp. hydrophila ATCC 7966]
Length = 311
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 77/178 (43%), Gaps = 35/178 (19%)
Query: 51 PVGQRLYVNTNY----GLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGS 104
P+ + L + N GL LP G +AP+ TA +++ + S P+T+ G
Sbjct: 70 PLARELIIADNVHGESGLDGPKLPDPG--FAPVAM-TALELMAKCLRESPQPVTLVPTGP 126
Query: 105 HTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAE 164
TN A+ L +P LK I I +MGGA + GN P AE
Sbjct: 127 LTNIALLLAAHPELKSKIARIVLMGGAAGA-----------------GNW-----TPAAE 164
Query: 165 FNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFER-RQNTYEAQYCFQSL 221
FNI+ DP AA V SG+P+T+ LD T V + + ER R T C L
Sbjct: 165 FNIYVDPEAADMVFKSGLPITMCGLDVTHEAQVMDE---DIERVRAITNPVAQCVAGL 219
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 107/258 (41%), Gaps = 55/258 (21%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M PV+ D D D +ALI L P + + + S+ T++ +L ++GR
Sbjct: 1 MALPVILDCDPGHDDAIALILALASPE--LKVLAVTTSAGNQTPDKTLNNALRILTLLGR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DDIPV G PK PL + +D ++G + D P+ P
Sbjct: 59 DDIPVAAG--------APK-------------PLARE-LIIADNVHGESGLDGPKLP--- 93
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESI-EPGSKITILTNGPLTNLAQIIGLQ 582
DP P+A+ + + + + E +T++ GPLTN+A ++
Sbjct: 94 ---------------DPGF-APVAMTALELMAKCLRESPQPVTLVPTGPLTNIALLLAAH 137
Query: 583 NS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
S I + ++GG G N + AEFN+++DP AA VF+S L I +
Sbjct: 138 PELKSKIARIVLMGGAAGAGNW---------TPAAEFNIYVDPEAADMVFKSGLPITMCG 188
Query: 642 LHMQRRVASFFKILHKLR 659
L + + + ++R
Sbjct: 189 LDVTHEAQVMDEDIERVR 206
>gi|429219892|ref|YP_007181536.1| inosine-uridine nucleoside N-ribohydrolase [Deinococcus
peraridilitoris DSM 19664]
gi|429130755|gb|AFZ67770.1| Inosine-uridine nucleoside N-ribohydrolase [Deinococcus
peraridilitoris DSM 19664]
Length = 308
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 35/188 (18%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNN 115
V+ GL LP R + + A Q +I+++ A P +T+ + TN A+ +
Sbjct: 79 VHGASGLDGPLLPSPSRG---VEEGHAVQFIIDSVLASPGEVTLVPTAALTNLALAMRLE 135
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P + I+ I VMGG++ S GN P AEFNI DP AA
Sbjct: 136 PRIVPAIKEIVVMGGSLDS-----------------GNW-----TPSAEFNILCDPHAAK 173
Query: 176 TVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDT------WS 229
V +G+P+ + L+AT P + F R+ T ++ Q L+ R+ W+
Sbjct: 174 VVFGAGVPLVMFGLNATHQTPATPERVERF-RQLGTRMGEFTAQLLEFFREHHEERYGWN 232
Query: 230 GSPPFHEA 237
G+ P H+A
Sbjct: 233 GA-PIHDA 239
>gi|332281792|ref|ZP_08394205.1| ribonucleoside hydrolase 1 [Shigella sp. D9]
gi|332104144|gb|EGJ07490.1| ribonucleoside hydrolase 1 [Shigella sp. D9]
Length = 322
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 92 VHGESGLDGPALPEPA--FAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 148
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 149 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 186
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 187 IVFQSGIPVVMAGLDVT 203
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 12 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 69
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + + +D ++G + D P P
Sbjct: 70 TDIPV------AGGAVKPLMREL----------------IIADNVHGESGLDGPALPEPA 107
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 108 FA--------PQNCTAVELMA-------KTLRESAEP---VTIVSTGPQTNVALLLNSHP 149
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 150 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 200
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 201 DVTHKAQIHVEDTERFR 217
>gi|399054475|ref|ZP_10742973.1| Inosine-uridine nucleoside N-ribohydrolase [Brevibacillus sp.
CF112]
gi|433546157|ref|ZP_20502492.1| hypothetical protein D478_20831 [Brevibacillus agri BAB-2500]
gi|398047794|gb|EJL40301.1| Inosine-uridine nucleoside N-ribohydrolase [Brevibacillus sp.
CF112]
gi|432182529|gb|ELK40095.1| hypothetical protein D478_20831 [Brevibacillus agri BAB-2500]
Length = 294
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 21/116 (18%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
SA P T+ +G T A+ + N +E + V GGAIR
Sbjct: 100 SANPYTLVTLGRLTTVAMAMARNHEWTSALERLVVRGGAIR------------------- 140
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERR 208
P D AE N+ +DP AA VL + +P+ +PLDAT+++ +E + E +R
Sbjct: 141 --VPGDVTSVAEANLHADPEAAAFVLAARLPLLFVPLDATESLSAAEAYIDELAKR 194
>gi|323528527|ref|YP_004230679.1| Inosine/uridine-preferring nucleoside hydrolase [Burkholderia sp.
CCGE1001]
gi|323385529|gb|ADX57619.1| Inosine/uridine-preferring nucleoside hydrolase [Burkholderia sp.
CCGE1001]
Length = 321
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMN 114
+++ + GL L G APL A + +I+ + A P +T+ +G TN A+ L +
Sbjct: 81 WIHGDNGLGNITL--GDSPAAPLDARPAHRFIIDTVRAHPGEVTLLAVGPLTNLALALAD 138
Query: 115 NPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAA 174
+P + ++ + VMGGA +D +GN+ P AE NI DP AA
Sbjct: 139 DPQIAPLVKQVVVMGGAFGTDGV-------------LGNV-----TPAAEANILGDPDAA 180
Query: 175 YTVLHSGIPVTIIPLDATKTIPVSENFFVEFERR 208
V + PV I+ LD T+ +S ++ R
Sbjct: 181 DIVFGAAWPVVIVGLDVTQRTIMSRDYLASIRDR 214
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 9/113 (7%)
Query: 552 KSIVESIE--PGSKITILTNGPLTNLAQIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVF 608
+ I++++ PG ++T+L GPLTNLA + + +++ V ++GG G D GNV
Sbjct: 108 RFIIDTVRAHPG-EVTLLAVGPLTNLALALADDPQIAPLVKQVVVMGGAFGTDGVLGNV- 165
Query: 609 TVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDR 661
+ AE N+ DP AA VF + + ++ L + +R L +RDR
Sbjct: 166 ----TPAAEANILGDPDAADIVFGAAWPVVIVGLDVTQRTIMSRDYLASIRDR 214
>gi|432669566|ref|ZP_19905111.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE119]
gi|431213299|gb|ELF11175.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE119]
Length = 311
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPEPA--FAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNIALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAVKPLMREL----------------IIADNVHGESGLDGPALPEPA 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVELMA-------KTLRESAEP---VTIVSTGPQTNIALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHVEDTERFR 206
>gi|427419414|ref|ZP_18909597.1| Inosine-uridine nucleoside N-ribohydrolase [Leptolyngbya sp. PCC
7375]
gi|425762127|gb|EKV02980.1| Inosine-uridine nucleoside N-ribohydrolase [Leptolyngbya sp. PCC
7375]
Length = 309
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 71/166 (42%), Gaps = 27/166 (16%)
Query: 44 CRYRQAIPVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFV 101
C P+ + V+ GL+ LP + L+ A LI+ + ++ PIT+
Sbjct: 67 CPRPMLRPLSTAVDVHGATGLQGTELPAPQQS---LKMQHAVAFLIDTLQQASAPITLAT 123
Query: 102 MGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNP 161
+G TN A+ L+ P + I+ I MGGAI GN+ P
Sbjct: 124 LGPLTNIAVALIQAPQITNKIDTIIAMGGAITH-----------------GNMTPG---- 162
Query: 162 YAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFER 207
AEFNI+ DP AA V SGIP+ +I LD T + + F
Sbjct: 163 -AEFNIYVDPHAAQVVFASGIPIKLITLDTTHQVLTTPERLKSFRE 207
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 101/259 (38%), Gaps = 55/259 (21%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M +P++ D D D +AL+ + P N+ GI + T + +
Sbjct: 1 MARPLIIDCDPGVDDAIALLLAIAHPAAF-NILGITTVAGNVPLHYTSQNALKIC-ALAH 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGL-ARDLPRSPRRY 523
DIPV GC PL + +D GL +LP +
Sbjct: 59 ADIPV-----------------YAGCPRPMLRPLSTA--VDVHGATGLQGTELPAPQQSL 99
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSK-ITILTNGPLTNLA-QIIGL 581
+++V F ++++++ S IT+ T GPLTN+A +I
Sbjct: 100 KMQHAVAF----------------------LIDTLQQASAPITLATLGPLTNIAVALIQA 137
Query: 582 QNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
++ I + +GG N + AEFN+++DP AA+ VF S + IKLI
Sbjct: 138 PQITNKIDTIIAMGGAITHGN---------MTPGAEFNIYVDPHAAQVVFASGIPIKLIT 188
Query: 642 LHMQRRVASFFKILHKLRD 660
L +V + + L R+
Sbjct: 189 LDTTHQVLTTPERLKSFRE 207
>gi|417537593|ref|ZP_12190449.1| Inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Wandsworth str. A4-580]
gi|353668206|gb|EHD05463.1| Inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Wandsworth str. A4-580]
Length = 261
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPE--PSFAP-QSGTAVELMAKTLRESAQPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ ++GN P AEFNI+ DP AA
Sbjct: 138 PELHTKIARIVIMGGAM-----------------ALGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 106/265 (40%), Gaps = 67/265 (25%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + +K I S+ T+ V +L ++ R
Sbjct: 1 MALPIIIDCDPGHDDAIALVLALASPE--LEVKAITSSAGNQTPEKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV A G V P L R+L
Sbjct: 59 PDIPV------AGGAVKP-----------------------------LMREL------II 77
Query: 525 AENSVRFGASQDNDDPELRQP-------LAVDVW-KSIVESIEPGSKITILTNGPLTNLA 576
A+N D P L +P AV++ K++ ES +P +TI++ GP TN+A
Sbjct: 78 ADN---VHGESGLDGPALPEPSFAPQSGTAVELMAKTLRESAQP---VTIVSTGPQTNVA 131
Query: 577 QIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ + I + I+GG N + AEFN+++DP AA+ VF+S +
Sbjct: 132 LLLNSHPELHTKIARIVIMGGAMALGN---------WTPAAEFNIYVDPEAAEIVFQSGI 182
Query: 636 EIKLIPLHMQRRVASFFKILHKLRD 660
+ + L + + + + RD
Sbjct: 183 PVVMAGLDVTHKAQIHAADIERFRD 207
>gi|408410080|ref|ZP_11181333.1| Inosine-uridine preferring nucleoside hydrolase [Lactobacillus sp.
66c]
gi|407875754|emb|CCK83139.1| Inosine-uridine preferring nucleoside hydrolase [Lactobacillus sp.
66c]
Length = 313
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 107/227 (47%), Gaps = 18/227 (7%)
Query: 540 PELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS-SSVIQDVYIVGGNK 598
P ++P +D+ I E+ P +T++ GPLT+LA+ + + S ++++Y +GG+
Sbjct: 101 PIAKKPAHLDMIDKIHEADGP---VTLVFTGPLTDLARALEIDPSIQDKVEELYWMGGSL 157
Query: 599 GQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKL 658
N GNVFT S E+N + DP A K V++SKL+I+ + L + ++
Sbjct: 158 ---NGHGNVFTPVSDDTQEWNAWWDPEACKTVWDSKLKIQQVGLESTEELPLTDEMRQHF 214
Query: 659 RDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKSL 718
+K P F L + + + Y L +VL + P + + KS
Sbjct: 215 NQNRKYPAFEFVGYLYSLVNSFEVDSTYY------LWDVL-TTMSALYPEIVTSRDTKS- 266
Query: 719 EIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEVLGDHK 765
++ +DG + G+ E G+ + ++ S N +++HF + + K
Sbjct: 267 DVYTDG--HRAGRFF-ETENGRPMTLVTSANYDKFWEHFDSLCKNAK 310
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 89/204 (43%), Gaps = 23/204 (11%)
Query: 13 GEGGILPNGTILPDVGGYQPIIDQGMSTAG--ECRYRQAIPVGQ--RLYVNTNYGLRK-A 67
G G +G + P V + IID+ E + P+ Q + +++ +
Sbjct: 31 GVGVTDADGYVEPGVSASRKIIDRFNQRGDKLEVARSNSRPINQFPEAWRVSSFSVDHFP 90
Query: 68 FLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHI 125
L + G P+ + A +I+ I + GP+T+ G T+ A L +P ++ +E +
Sbjct: 91 ILNETGVVKTPIAKKPAHLDMIDKIHEADGPVTLVFTGPLTDLARALEIDPSIQDKVEEL 150
Query: 126 YVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVT 185
Y MGG++ GN++ S+ E+N + DP A TV S + +
Sbjct: 151 YWMGGSLNGH----------------GNVFTPVSDDTQEWNAWWDPEACKTVWDSKLKIQ 194
Query: 186 IIPLDATKTIPVSENFFVEFERRQ 209
+ L++T+ +P+++ F + +
Sbjct: 195 QVGLESTEELPLTDEMRQHFNQNR 218
>gi|293413947|ref|ZP_06656596.1| rihA ribonucleoside hydrolase 1 [Escherichia coli B185]
gi|291434005|gb|EFF06978.1| rihA ribonucleoside hydrolase 1 [Escherichia coli B185]
Length = 311
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPEPA--FAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNIALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAVKPLMREL----------------IIADNVHGESGLDGPALPEPA 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVELMA-------KTLRESAEP---VTIVSTGPQTNIALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHVEDTERFR 206
>gi|415884989|ref|ZP_11546917.1| Ribosylpyrimidine nucleosidase [Bacillus methanolicus MGA3]
gi|387590658|gb|EIJ82977.1| Ribosylpyrimidine nucleosidase [Bacillus methanolicus MGA3]
Length = 304
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 64/137 (46%), Gaps = 27/137 (19%)
Query: 73 GRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGG 130
G + Q +A + + + I S + + +G TN A+ + + P + IE + +MGG
Sbjct: 93 GEPTCSVSQRSALEAMRDVILTSDQKVAIVAIGPLTNIALLVKSYPEVVAKIEQLSIMGG 152
Query: 131 AIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLD 190
A CF GN P AEFNI+ DP AA V +SGIP+T+ LD
Sbjct: 153 A----CFG-------------GN-----RTPVAEFNIYVDPEAAQIVFNSGIPITMFGLD 190
Query: 191 ATKTIPVSENFFVEFER 207
T +P+ F E ER
Sbjct: 191 VTHQVPM---FKEEIER 204
Score = 43.5 bits (101), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 10/98 (10%)
Query: 563 KITILTNGPLTNLAQII-GLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMF 621
K+ I+ GPLTN+A ++ + I+ + I+GG F + AEFN++
Sbjct: 118 KVAIVAIGPLTNIALLVKSYPEVVAKIEQLSIMGGA---------CFGGNRTPVAEFNIY 168
Query: 622 LDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLR 659
+DP AA+ VF S + I + L + +V F + + ++R
Sbjct: 169 VDPEAAQIVFNSGIPITMFGLDVTHQVPMFKEEIERIR 206
>gi|320591974|gb|EFX04413.1| uridine nucleosidase [Grosmannia clavigera kw1407]
Length = 382
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 65/139 (46%), Gaps = 22/139 (15%)
Query: 67 AFLPQGGRKYAPLRQPTAQQVLINAIS-------AGPITVFVMGSHTNFAIFLMNNPHLK 119
A LPQ PLR+P + A++ AG + G+ TN A +P L
Sbjct: 97 ALLPQ------PLRRPADDVSAVEAMARALMVEPAGTAWLVATGTLTNVAAMFATHPTLV 150
Query: 120 KNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLH 179
++I + +MGGAI D F + + IGN + P+AEFNI DP AA +LH
Sbjct: 151 EHIAGLSIMGGAI-GDGFTAAVAGTVNGRPRIGN-----TTPFAEFNILLDPEAAAALLH 204
Query: 180 S---GIPVTIIPLDATKTI 195
+ T+IPLD T +
Sbjct: 205 NPRLARKTTLIPLDLTHLV 223
>gi|310815657|ref|YP_003963621.1| pyrimidine-specific ribonucleoside hydrolase RihA
[Ketogulonicigenium vulgare Y25]
gi|308754392|gb|ADO42321.1| pyrimidine-specific ribonucleoside hydrolase RihA
[Ketogulonicigenium vulgare Y25]
Length = 314
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 107/252 (42%), Gaps = 46/252 (18%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
++ D D D LA++ L P E I + GI+ + T V +L + GR DIP
Sbjct: 6 IIIDTDPGQDDALAILLALGSPAE-IEVLGIVAVGGNVPLTRTSRNVRTVLELAGRTDIP 64
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V G P P+ ++ G+ G L G A P P + ++
Sbjct: 65 V------YEGHAVPMLRPLATAEHVH----GATG------LDGAALPEPEMPIMH--KHG 106
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVI 588
V F +D ++ EP +T+ T GPLT++AQ + + +I
Sbjct: 107 VDF---------------IIDTLRA-----EPADTVTLCTLGPLTDIAQ--AFRRAPDII 144
Query: 589 QDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
V V G E GN+ + AEFN+++DP AAK VF + + + L+PL + +
Sbjct: 145 PRVKRVVSMGGAYFEVGNI-----TPAAEFNIWVDPEAAKVVFGAGVPLTLVPLDVTHQA 199
Query: 649 ASFFKILHKLRD 660
+ + + + RD
Sbjct: 200 LTTRERVQRFRD 211
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 80/194 (41%), Gaps = 32/194 (16%)
Query: 51 PVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP---ITVFVMGSHTN 107
P+ +V+ GL A LP+ P+ +I+ + A P +T+ +G T+
Sbjct: 76 PLATAEHVHGATGLDGAALPE---PEMPIMHKHGVDFIIDTLRAEPADTVTLCTLGPLTD 132
Query: 108 FAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNI 167
A P + ++ + MGGA +GN+ P AEFNI
Sbjct: 133 IAQAFRRAPDIIPRVKRVVSMGGAYFE----------------VGNI-----TPAAEFNI 171
Query: 168 FSDPFAAYTVLHSGIPVTIIPLDAT-KTIPVSENF--FVEFERRQNTYEAQYC--FQSLK 222
+ DP AA V +G+P+T++PLD T + + E F + R A + F+
Sbjct: 172 WVDPEAAKVVFGAGVPLTLVPLDVTHQALTTRERVQRFRDMGTRLGDAVAGWLDFFERFD 231
Query: 223 MIRDTWSGSPPFHE 236
+ G PP H+
Sbjct: 232 TAKYGSDGGPPLHD 245
>gi|339998575|ref|YP_004729458.1| nucleoside hydrolase [Salmonella bongori NCTC 12419]
gi|339511936|emb|CCC29652.1| putative nucleoside hydrolase [Salmonella bongori NCTC 12419]
Length = 311
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 48/100 (48%), Gaps = 22/100 (22%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
SA P+T+ G TN A+ L ++P L I I +MGGA+ +G
Sbjct: 115 SAQPVTIVSTGPQTNVALLLNSHPELHTKIARIVIMGGAM-----------------GLG 157
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
N P AEFNIF DP AA V SGIPV + LD T
Sbjct: 158 NW-----TPAAEFNIFVDPEAAEIVFQSGIPVVMAGLDVT 192
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 103/252 (40%), Gaps = 67/252 (26%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + +K I S+ T+ V +L ++ R
Sbjct: 1 MALPMIIDCDPGHDDAIALVLALASPE--LEVKAITSSAGNQTPDKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV A G V P L R+L
Sbjct: 59 PDIPV------AAGAVKP-----------------------------LMREL------II 77
Query: 525 AENSVRFGASQDNDDPELRQPL-------AVDVW-KSIVESIEPGSKITILTNGPLTNLA 576
A+N D P L +P AV++ K++ ES +P +TI++ GP TN+A
Sbjct: 78 ADN---VHGESGLDGPALPEPSFLPQRCSAVELMAKTLRESAQP---VTIVSTGPQTNVA 131
Query: 577 QIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ + I + I+GG G N + AEFN+F+DP AA+ VF+S +
Sbjct: 132 LLLNSHPELHTKIARIVIMGGAMGLGN---------WTPAAEFNIFVDPEAAEIVFQSGI 182
Query: 636 EIKLIPLHMQRR 647
+ + L + +
Sbjct: 183 PVVMAGLDVTHK 194
>gi|419253319|ref|ZP_13795866.1| ribonucleoside hydrolase 1 [Escherichia coli DEC10A]
gi|378106999|gb|EHW68625.1| ribonucleoside hydrolase 1 [Escherichia coli DEC10A]
Length = 248
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 77/176 (43%), Gaps = 48/176 (27%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPE--PTFAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDATKTI---------------PVSE------NFFVEFERRQN 210
V SGIPV + LD T PVS +FF+E+ + +N
Sbjct: 176 IVFQSGIPVVMAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAELLDFFLEYHKAKN 231
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 104/245 (42%), Gaps = 53/245 (21%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAVKPLM----------------RELIIADNVHGESGLDGPALPEPT 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL + K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVEL-------MAKTLRESAEP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRR 647
+ +
Sbjct: 190 DVTHK 194
>gi|418784456|ref|ZP_13340293.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|392753987|gb|EJA10906.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
Length = 311
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 60/128 (46%), Gaps = 33/128 (25%)
Query: 67 AFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEH 124
+F PQ G TA +++ + SA P+T+ G TN A+ L ++P L I
Sbjct: 96 SFAPQSG---------TAVELMAKTLRESAQPVTIVSTGPQTNVALLLNSHPELHTKIAR 146
Query: 125 IYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPV 184
I +MGGA+ ++GN P AEFNI+ DP AA + SGIPV
Sbjct: 147 IVIMGGAM-----------------ALGNW-----TPAAEFNIYVDPEAAEIIFQSGIPV 184
Query: 185 TIIPLDAT 192
+ LD T
Sbjct: 185 VMAGLDVT 192
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 111/276 (40%), Gaps = 54/276 (19%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + +K I S+ T+ V +L ++ R
Sbjct: 1 MALPIIIDCDPGHDDAIALVLALASPE--LEVKAITSSAGNQTPEKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 PDIPV------AGGAVKPLM----------------RELIIADNVHGESGLDGPALP--- 93
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
E S A Q EL K++ ES +P +TI++ GP TN+A ++
Sbjct: 94 --EPSF---APQSGTAVELMA-------KTLRESAQP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+ I + I+GG N + AEFN+++DP AA+ +F+S + + + L
Sbjct: 139 ELHTKIARIVIMGGAMALGN---------WTPAAEFNIYVDPEAAEIIFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLM 678
+ + + + RD P S LL M
Sbjct: 190 DVTHKAQIHAADIERFRDIGN-PISTIVAELLDFFM 224
>gi|425287201|ref|ZP_18678132.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli 3006]
gi|408218679|gb|EKI42881.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli 3006]
Length = 311
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA PIT+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPEPA--FAP-QNCTAVELMAKTLRESAEPITIVSTGPKTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 107/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAVKPLMREL----------------IIADNVHGESGLDGPALPEPA 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES EP ITI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVELMA-------KTLRESAEP---ITIVSTGPKTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ R + + R
Sbjct: 190 DVTHRAQIHVEDTERFR 206
>gi|330991721|ref|ZP_08315671.1| hypothetical protein SXCC_01627 [Gluconacetobacter sp. SXCC-1]
gi|329761189|gb|EGG77683.1| hypothetical protein SXCC_01627 [Gluconacetobacter sp. SXCC-1]
Length = 332
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 72/168 (42%), Gaps = 29/168 (17%)
Query: 95 GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNL 154
G IT+ +G TN A+ ++ P + + +E I MGGA
Sbjct: 138 GAITLCCLGPMTNIALAMLKAPDMAQQLEQIVFMGGAA---------------------C 176
Query: 155 YPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEA 214
P + P AEFN DP AA+ VL +G +T+ LD T+ + V R T A
Sbjct: 177 VPGNITPAAEFNFHVDPHAAHVVLSTGRNLTMFGLDVTRRMTVPAGRMAAM-RCHATDPA 235
Query: 215 QYCFQSLKMIRDTWSGSPPFHE----AYCMWDSFMAGVALSIMLNSSS 258
+ ++M+ D G P H+ A+ + +GVA + ++ +S
Sbjct: 236 RM---MVRMLDDYAHGDPALHDPCVIAHLLRPDLFSGVAGHVQVDCTS 280
>gi|88191852|pdb|1YOE|A Chain A, Crystal Structure Of A The E. Coli Pyrimidine Nucleoside
Hydrolase Ybek With Bound Ribose
Length = 322
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 92 VHGESGLDGPALPE--PTFAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 148
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 149 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 186
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 187 IVFQSGIPVVMAGLDVT 203
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 106/254 (41%), Gaps = 53/254 (20%)
Query: 408 PVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDI 467
P++ D D D +A++ L P +++K I S+ T+ V +L ++ R DI
Sbjct: 15 PILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTDI 72
Query: 468 PVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRYTAE 526
PV A G V P + + +D ++G + D P P A
Sbjct: 73 PV------AGGAVKPLMREL----------------IIADNVHGESGLDGPALPEPTFA- 109
Query: 527 NSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS-S 585
Q+ EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 110 -------PQNCTAVELMA-------KTLRESAEP---VTIVSTGPQTNVALLLNSHPELH 152
Query: 586 SVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQ 645
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L +
Sbjct: 153 SKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGLDVT 203
Query: 646 RRVASFFKILHKLR 659
+ + + R
Sbjct: 204 HKAQIHVEDTERFR 217
>gi|170020992|ref|YP_001725946.1| ribonucleoside hydrolase 1 [Escherichia coli ATCC 8739]
gi|188494847|ref|ZP_03002117.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
53638]
gi|300920533|ref|ZP_07136959.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 115-1]
gi|386612830|ref|YP_006132496.1| hypothetical protein UMNK88_688 [Escherichia coli UMNK88]
gi|419174096|ref|ZP_13717950.1| ribonucleoside hydrolase 1 [Escherichia coli DEC7B]
gi|421776997|ref|ZP_16213597.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
AD30]
gi|432368604|ref|ZP_19611709.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE10]
gi|432484358|ref|ZP_19726281.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE212]
gi|432532812|ref|ZP_19769810.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE234]
gi|432579315|ref|ZP_19815749.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE56]
gi|433172492|ref|ZP_20357049.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE232]
gi|189040109|sp|B1IYF7.1|RIHA_ECOLC RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|169755920|gb|ACA78619.1| Purine nucleosidase [Escherichia coli ATCC 8739]
gi|188490046|gb|EDU65149.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
53638]
gi|300412472|gb|EFJ95782.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 115-1]
gi|332341999|gb|AEE55333.1| conserved hypothetical protein [Escherichia coli UMNK88]
gi|378037215|gb|EHV99747.1| ribonucleoside hydrolase 1 [Escherichia coli DEC7B]
gi|408457889|gb|EKJ81680.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
AD30]
gi|430889070|gb|ELC11741.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE10]
gi|431018159|gb|ELD31596.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE212]
gi|431063695|gb|ELD72928.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE234]
gi|431109017|gb|ELE12988.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE56]
gi|431695993|gb|ELJ61191.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE232]
Length = 311
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPEPA--FAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAVKPLMREL----------------IIADNVHGESGLDGPALPEPA 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVELMA-------KTLRESAEP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHVEDTERFR 206
>gi|193063463|ref|ZP_03044553.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
E22]
gi|194429750|ref|ZP_03062266.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
B171]
gi|260842877|ref|YP_003220655.1| ribonucleoside hydrolase 1 [Escherichia coli O103:H2 str. 12009]
gi|415804750|ref|ZP_11501059.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli E128010]
gi|417176810|ref|ZP_12006606.1| cytidine/uridine-specific hydrolase [Escherichia coli 3.2608]
gi|417179590|ref|ZP_12007580.1| cytidine/uridine-specific hydrolase [Escherichia coli 93.0624]
gi|417252655|ref|ZP_12044414.1| cytidine/uridine-specific hydrolase [Escherichia coli 4.0967]
gi|417621968|ref|ZP_12272295.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli STEC_H.1.8]
gi|419288116|ref|ZP_13830232.1| ribonucleoside hydrolase 1 [Escherichia coli DEC11A]
gi|419293452|ref|ZP_13835512.1| ribonucleoside hydrolase 1 [Escherichia coli DEC11B]
gi|419298934|ref|ZP_13840950.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
DEC11C]
gi|419305200|ref|ZP_13847112.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
DEC11D]
gi|419310252|ref|ZP_13852127.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
DEC11E]
gi|419315529|ref|ZP_13857356.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
DEC12A]
gi|419321373|ref|ZP_13863112.1| ribonucleoside hydrolase 1 [Escherichia coli DEC12B]
gi|419327592|ref|ZP_13869224.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
DEC12C]
gi|419333029|ref|ZP_13874588.1| ribonucleoside hydrolase 1 [Escherichia coli DEC12D]
gi|419338432|ref|ZP_13879920.1| ribonucleoside hydrolase 1 [Escherichia coli DEC12E]
gi|419868765|ref|ZP_14391013.1| ribonucleoside hydrolase 1 [Escherichia coli O103:H2 str. CVM9450]
gi|420390042|ref|ZP_14889312.1| ribonucleoside hydrolase 1 [Escherichia coli EPEC C342-62]
gi|192931047|gb|EDV83651.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
E22]
gi|194412231|gb|EDX28537.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
B171]
gi|257758024|dbj|BAI29521.1| ribonucleoside hydrolase 1 [Escherichia coli O103:H2 str. 12009]
gi|323158895|gb|EFZ44906.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli E128010]
gi|345385677|gb|EGX15516.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli STEC_H.1.8]
gi|378136083|gb|EHW97383.1| ribonucleoside hydrolase 1 [Escherichia coli DEC11A]
gi|378146350|gb|EHX07502.1| ribonucleoside hydrolase 1 [Escherichia coli DEC11B]
gi|378152650|gb|EHX13743.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
DEC11D]
gi|378156454|gb|EHX17504.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
DEC11C]
gi|378160885|gb|EHX21871.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
DEC11E]
gi|378174250|gb|EHX35077.1| ribonucleoside hydrolase 1 [Escherichia coli DEC12B]
gi|378174731|gb|EHX35554.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
DEC12A]
gi|378176169|gb|EHX36976.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
DEC12C]
gi|378190226|gb|EHX50811.1| ribonucleoside hydrolase 1 [Escherichia coli DEC12D]
gi|378193625|gb|EHX54157.1| ribonucleoside hydrolase 1 [Escherichia coli DEC12E]
gi|386179502|gb|EIH56981.1| cytidine/uridine-specific hydrolase [Escherichia coli 3.2608]
gi|386186252|gb|EIH68969.1| cytidine/uridine-specific hydrolase [Escherichia coli 93.0624]
gi|386216586|gb|EII33075.1| cytidine/uridine-specific hydrolase [Escherichia coli 4.0967]
gi|388343879|gb|EIL09778.1| ribonucleoside hydrolase 1 [Escherichia coli O103:H2 str. CVM9450]
gi|391314798|gb|EIQ72341.1| ribonucleoside hydrolase 1 [Escherichia coli EPEC C342-62]
Length = 311
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPEPA--FAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAVKPLMREL----------------IIADNVHGESGLDGPALPEPA 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVELMA-------KTLRESAEP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHVEDTERFR 206
>gi|354595513|ref|ZP_09013530.1| Inosine/uridine-preferring nucleoside hydrolase [Brenneria sp.
EniD312]
gi|353673448|gb|EHD19481.1| Inosine/uridine-preferring nucleoside hydrolase [Brenneria sp.
EniD312]
Length = 317
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 21/113 (18%)
Query: 96 PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY 155
PIT+ +G TN A+ L ++P + + ++ I M GA ++GN
Sbjct: 121 PITICALGPMTNLALALRHHPDVARGVKQIVSMSGAF----------------SALGNRV 164
Query: 156 PDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERR 208
P +A+FN+++DP AA V SG+PV I+PLD T + + + RR
Sbjct: 165 P-----WADFNVYADPHAAEIVFSSGVPVVIMPLDMTFQALIQRHQVDDLARR 212
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 7/81 (8%)
Query: 564 ITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLD 623
ITI GP+TNLA + L++ V + V + G + GN VP +A+FN++ D
Sbjct: 122 ITICALGPMTNLA--LALRHHPDVARGVKQIVSMSGAFSALGN--RVP---WADFNVYAD 174
Query: 624 PLAAKAVFESKLEIKLIPLHM 644
P AA+ VF S + + ++PL M
Sbjct: 175 PHAAEIVFSSGVPVVIMPLDM 195
>gi|288562948|pdb|3G5I|A Chain A, Crystal Structure Of The E.Coli Riha Pyrimidine
Nucleosidase Bound To A Iminoribitol-Based Inhibitor
gi|288562949|pdb|3G5I|B Chain B, Crystal Structure Of The E.Coli Riha Pyrimidine
Nucleosidase Bound To A Iminoribitol-Based Inhibitor
gi|288562950|pdb|3G5I|C Chain C, Crystal Structure Of The E.Coli Riha Pyrimidine
Nucleosidase Bound To A Iminoribitol-Based Inhibitor
gi|288562951|pdb|3G5I|D Chain D, Crystal Structure Of The E.Coli Riha Pyrimidine
Nucleosidase Bound To A Iminoribitol-Based Inhibitor
Length = 312
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 82 VHGESGLDGPALPE--PTFAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 138
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 139 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 176
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 177 IVFQSGIPVVMAGLDVT 193
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 106/254 (41%), Gaps = 53/254 (20%)
Query: 408 PVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDI 467
P++ D D D +A++ L P +++K I S+ T+ V +L ++ R DI
Sbjct: 5 PILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTDI 62
Query: 468 PVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRYTAE 526
PV A G V P + + +D ++G + D P P A
Sbjct: 63 PV------AGGAVKPLMREL----------------IIADNVHGESGLDGPALPEPTFA- 99
Query: 527 NSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS-S 585
Q+ EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 100 -------PQNCTAVELMA-------KTLRESAEP---VTIVSTGPQTNVALLLNSHPELH 142
Query: 586 SVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQ 645
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L +
Sbjct: 143 SKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGLDVT 193
Query: 646 RRVASFFKILHKLR 659
+ + + R
Sbjct: 194 HKAQIHVEDTERFR 207
>gi|386728016|ref|YP_006194399.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus 71193]
gi|387601544|ref|YP_005733065.1| pyrimidine-specific ribonucleoside hydrolase RihA
(Cytidine/uridine-specific hydrolase) [Staphylococcus
aureus subsp. aureus ST398]
gi|387779418|ref|YP_005754216.1| putative inosine-uridine preferring nucleosidehydrolase
[Staphylococcus aureus subsp. aureus LGA251]
gi|404477561|ref|YP_006708991.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus 08BA02176]
gi|418311120|ref|ZP_12922648.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus 21331]
gi|418979641|ref|ZP_13527434.1| Inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus DR10]
gi|283469482|emb|CAQ48693.1| pyrimidine-specific ribonucleoside hydrolase RihA
(Cytidine/uridine-specific hydrolase) [Staphylococcus
aureus subsp. aureus ST398]
gi|344176520|emb|CCC86976.1| putative inosine-uridine preferring nucleosidehydrolase
[Staphylococcus aureus subsp. aureus LGA251]
gi|365235222|gb|EHM76143.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus 21331]
gi|379992648|gb|EIA14100.1| Inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus DR10]
gi|384229309|gb|AFH68556.1| Inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus 71193]
gi|404439050|gb|AFR72243.1| putative inosine-uridine preferring nucleoside hydrolase
[Staphylococcus aureus 08BA02176]
Length = 311
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 73/173 (42%), Gaps = 34/173 (19%)
Query: 78 PLRQPTA---QQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAI 132
P RQ A V+IN + S P+T+ G TN A L+ P + ++IE I +MGG
Sbjct: 97 PSRQAVAMPASDVIINKVMTSDTPVTIVATGPLTNVATALIREPRIAEHIESITLMGGG- 155
Query: 133 RSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
+ GN P AEFNI+ D AA V SGI + + LD T
Sbjct: 156 -----------------TFGNW-----TPTAEFNIWVDAEAAKRVFESGITINVFGLDVT 193
Query: 193 KTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWS-----GSPPFHEAYCM 240
+ E+ FE N AQ+ + L+ + T+ P H+A +
Sbjct: 194 HQVLADEHVIERFESINNPV-AQFVVELLQFFKKTYKTHFNMDGGPIHDACTI 245
Score = 46.6 bits (109), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 114/283 (40%), Gaps = 55/283 (19%)
Query: 405 MGKPVVFDIDMSAGDFLALIYL--LKLPVELINLKGILVSSTGWATSATVDVVYDLLHMM 462
M + ++ D D D +ALI + P+E++ + + + + ++L +M
Sbjct: 1 MKRKIIMDCDPGHDDAIALILAGAIDSPLEILAVTTV---AGNQSVDKNTTNALNVLDIM 57
Query: 463 GRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRR 522
GR DI V G P I +A I SG LD LP +P R
Sbjct: 58 GRQDIAVAKG---------ADRPLIKPAAFASEIHGESG--LD-------GPKLPSTPSR 99
Query: 523 YTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQ-IIGL 581
+ P + + ++ S P +TI+ GPLTN+A +I
Sbjct: 100 QA-----------------VAMPASDVIINKVMTSDTP---VTIVATGPLTNVATALIRE 139
Query: 582 QNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
+ I+ + ++GG GN + AEFN+++D AAK VFES + I +
Sbjct: 140 PRIAEHIESITLMGGGTF-----GN-----WTPTAEFNIWVDAEAAKRVFESGITINVFG 189
Query: 642 LHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSH 684
L + +V + ++ + + P + F LLQ ++H
Sbjct: 190 LDVTHQVLADEHVIERF-ESINNPVAQFVVELLQFFKKTYKTH 231
>gi|49482477|ref|YP_039701.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus MRSA252]
gi|282902825|ref|ZP_06310718.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus C160]
gi|282907226|ref|ZP_06315074.1| purine nucleosidase [Staphylococcus aureus subsp. aureus Btn1260]
gi|282907570|ref|ZP_06315412.1| purine nucleosidase [Staphylococcus aureus subsp. aureus WW2703/97]
gi|283959679|ref|ZP_06377120.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus A017934/97]
gi|295426779|ref|ZP_06819418.1| purine nucleosidase [Staphylococcus aureus subsp. aureus EMRSA16]
gi|297589017|ref|ZP_06947658.1| purine nucleosidase [Staphylococcus aureus subsp. aureus MN8]
gi|415683293|ref|ZP_11448526.1| putative inosine-uridine preferring nucleoside hydrolase
[Staphylococcus aureus subsp. aureus CGS00]
gi|418565925|ref|ZP_13130316.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus 21264]
gi|418580916|ref|ZP_13145001.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIG1605]
gi|418597249|ref|ZP_13160780.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus 21342]
gi|418602766|ref|ZP_13166164.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus 21345]
gi|418890763|ref|ZP_13444886.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIG1176]
gi|418899545|ref|ZP_13453608.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIG1214]
gi|418907924|ref|ZP_13461940.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIG149]
gi|418916086|ref|ZP_13470050.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIG1267]
gi|418921871|ref|ZP_13475792.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIG1233]
gi|418981147|ref|ZP_13528863.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIG1242]
gi|418984739|ref|ZP_13532432.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIG1500]
gi|49240606|emb|CAG39263.1| putative inosine-uridine preferring nucleoside hydrolase
[Staphylococcus aureus subsp. aureus MRSA252]
gi|282328475|gb|EFB58746.1| purine nucleosidase [Staphylococcus aureus subsp. aureus WW2703/97]
gi|282330125|gb|EFB59646.1| purine nucleosidase [Staphylococcus aureus subsp. aureus Btn1260]
gi|282597284|gb|EFC02243.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus C160]
gi|283789271|gb|EFC28098.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus A017934/97]
gi|295129231|gb|EFG58858.1| purine nucleosidase [Staphylococcus aureus subsp. aureus EMRSA16]
gi|297577528|gb|EFH96241.1| purine nucleosidase [Staphylococcus aureus subsp. aureus MN8]
gi|315194693|gb|EFU25082.1| putative inosine-uridine preferring nucleoside hydrolase
[Staphylococcus aureus subsp. aureus CGS00]
gi|371972280|gb|EHO89663.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus 21264]
gi|374394793|gb|EHQ66073.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus 21345]
gi|374395109|gb|EHQ66382.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus 21342]
gi|377706764|gb|EHT31059.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIG1214]
gi|377708418|gb|EHT32707.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIG1242]
gi|377708818|gb|EHT33098.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIG1500]
gi|377712711|gb|EHT36927.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIG1605]
gi|377734386|gb|EHT58424.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIG1176]
gi|377736881|gb|EHT60895.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIG1233]
gi|377752315|gb|EHT76238.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIG1267]
gi|377758619|gb|EHT82503.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIG149]
Length = 311
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 73/173 (42%), Gaps = 34/173 (19%)
Query: 78 PLRQPTA---QQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAI 132
P RQ A V+IN + S P+T+ G TN A L+ P + ++IE I +MGG
Sbjct: 97 PSRQAVAMPASDVIINKVMTSDTPVTIVATGPLTNVATALIREPRIAEHIESITLMGGG- 155
Query: 133 RSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
+ GN P AEFNI+ D AA V SGI + + LD T
Sbjct: 156 -----------------TFGNW-----TPTAEFNIWVDAEAAKRVFESGITINVFGLDVT 193
Query: 193 KTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWS-----GSPPFHEAYCM 240
+ E+ FE N AQ+ + L+ + T+ P H+A +
Sbjct: 194 HQVLADEHVIERFESINNPV-AQFVVELLQFFKKTYKTHFNMDGGPIHDACTI 245
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 114/283 (40%), Gaps = 55/283 (19%)
Query: 405 MGKPVVFDIDMSAGDFLALIYL--LKLPVELINLKGILVSSTGWATSATVDVVYDLLHMM 462
M + ++ D D D +ALI + P+E++ + + + + ++L +M
Sbjct: 1 MKRKIIMDCDPGHDDAIALILAGAIDSPLEILAVTTV---AGNQSVDKNTTNALNVLDIM 57
Query: 463 GRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRR 522
GR DI V G P I +A I SG LD LP +P R
Sbjct: 58 GRQDIVVAKG---------ADRPLIKLVAFASEIHGESG--LD-------GPKLPSTPSR 99
Query: 523 YTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQ-IIGL 581
+ P + + ++ S P +TI+ GPLTN+A +I
Sbjct: 100 QA-----------------VAMPASDVIINKVMTSDTP---VTIVATGPLTNVATALIRE 139
Query: 582 QNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
+ I+ + ++GG GN + AEFN+++D AAK VFES + I +
Sbjct: 140 PRIAEHIESITLMGGGTF-----GN-----WTPTAEFNIWVDAEAAKRVFESGITINVFG 189
Query: 642 LHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSH 684
L + +V + ++ + + P + F LLQ ++H
Sbjct: 190 LDVTHQVLADEHVIERF-ESINNPVAQFVVELLQFFKKTYKTH 231
>gi|386824568|ref|ZP_10111701.1| ribonucleoside hydrolase 1 [Serratia plymuthica PRI-2C]
gi|386378525|gb|EIJ19329.1| ribonucleoside hydrolase 1 [Serratia plymuthica PRI-2C]
Length = 310
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 68/138 (49%), Gaps = 27/138 (19%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMN 114
+V+ G+ LP K P+ Q TA +++ + S PIT+ V G TN A+ L
Sbjct: 80 HVHGKTGMGNTHLPTPTIK--PVTQ-TAVELIAGLLRTSPQPITLVVTGPMTNIALLLAQ 136
Query: 115 NPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAA 174
+ LK NI+ I MGG + N+ N++ P AEFNIF DP AA
Sbjct: 137 HAELKGNIQRIVFMGGGM-----NAGNAT-----------------PVAEFNIFVDPEAA 174
Query: 175 YTVLHSGIPVTIIPLDAT 192
VL SG+P+T+ L+ T
Sbjct: 175 EIVLKSGVPLTMAGLNVT 192
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 102/260 (39%), Gaps = 59/260 (22%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M +P++ D D D +AL L+ P +++K I S+ T+ LL +M R
Sbjct: 1 MPRPIIIDCDPGLDDAIALAMALRSPE--LDVKAITTSAGNQTPEKTLHNALGLLTLMKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA----RDLPRSP 520
+DIPV G A PL + +D ++G LP
Sbjct: 59 EDIPVAAG---------------------AAAPLMRA-LVIADHVHGKTGMGNTHLPTPT 96
Query: 521 RRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIG 580
+ + +V A P QP IT++ GP+TN+A ++
Sbjct: 97 IKPVTQTAVELIAGLLRTSP---QP------------------ITLVVTGPMTNIALLLA 135
Query: 581 LQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKL 639
IQ + +GG N ++ AEFN+F+DP AA+ V +S + + +
Sbjct: 136 QHAELKGNIQRIVFMGGGMNAGN---------ATPVAEFNIFVDPEAAEIVLKSGVPLTM 186
Query: 640 IPLHMQRRVASFFKILHKLR 659
L++ + K + ++R
Sbjct: 187 AGLNVTHQALVLPKDIERIR 206
>gi|445315227|ref|ZP_21411941.1| ribonucleoside hydrolase 1, partial [Salmonella enterica subsp.
enterica serovar Enteritidis str. 436]
gi|444871737|gb|ELX96134.1| ribonucleoside hydrolase 1, partial [Salmonella enterica subsp.
enterica serovar Enteritidis str. 436]
Length = 198
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 37 VHGESGLNGPALPE--PSFAP-QSGTAVELMAKTLRESAQPVTIVSTGPQTNVALLLNSH 93
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ ++GN P AEFNI+ DP AA
Sbjct: 94 PELHTKIARIVIMGGAM-----------------ALGNW-----TPAAEFNIYVDPEAAE 131
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 132 IVFQSGIPVVMAGLDVT 148
Score = 40.4 bits (93), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 13/97 (13%)
Query: 552 KSIVESIEPGSKITILTNGPLTNLAQIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTV 610
K++ ES +P +TI++ GP TN+A ++ + I + I+GG N
Sbjct: 66 KTLRESAQP---VTIVSTGPQTNVALLLNSHPELHTKIARIVIMGGAMALGN-------- 114
Query: 611 PSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
+ AEFN+++DP AA+ VF+S + + + L + +
Sbjct: 115 -WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGLDVTHK 150
>gi|421728899|ref|ZP_16168049.1| ribonucleoside hydrolase 1 [Klebsiella oxytoca M5al]
gi|410369994|gb|EKP24725.1| ribonucleoside hydrolase 1 [Klebsiella oxytoca M5al]
Length = 283
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 58/130 (44%), Gaps = 24/130 (18%)
Query: 83 TAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNST 140
TA +++ N + S P+T+ G TN A+ L ++P L IE I +MGGA+
Sbjct: 103 TAVELMANILRDSVEPVTIVATGPQTNVALLLNSHPELHAKIERIVIMGGAM-------- 154
Query: 141 NSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSEN 200
+GN P EFNI+ DP AA V SG+PV + LD T +
Sbjct: 155 ---------VLGNW-----QPAVEFNIYVDPEAAEIVFQSGLPVVMAGLDVTHKAQIHVE 200
Query: 201 FFVEFERRQN 210
F R N
Sbjct: 201 DIERFRRIGN 210
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 116/274 (42%), Gaps = 58/274 (21%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M PV+ D D D +AL+ L P +++K + S+ T+ V +L ++ R
Sbjct: 1 MALPVIIDCDPGHDDAIALVLALASPE--LDVKAVTSSAGNQTPDKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPR-R 522
DIPV A G + P + +D ++G + D P P R
Sbjct: 59 PDIPV------AGGALKPLM----------------RELIIADNVHGESGLDGPALPEPR 96
Query: 523 YTAENSVRFGASQDNDDPELRQPLAVDVWKSIV-ESIEPGSKITILTNGPLTNLAQIIGL 581
+ A++ AV++ +I+ +S+EP +TI+ GP TN+A ++
Sbjct: 97 FAAQSCT-----------------AVELMANILRDSVEP---VTIVATGPQTNVALLLNS 136
Query: 582 QNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLI 640
+ I+ + I+GG N + V EFN+++DP AA+ VF+S L + +
Sbjct: 137 HPELHAKIERIVIMGGAMVLGNWQPAV---------EFNIYVDPEAAEIVFQSGLPVVMA 187
Query: 641 PLHMQRRVASFFKILHKLRDRKKTPESVFSQRLL 674
L + + + + + R R P S LL
Sbjct: 188 GLDVTHKAQIHVEDIERFR-RIGNPISTIVAELL 220
>gi|334122890|ref|ZP_08496924.1| cytidine/uridine-specific hydrolase [Enterobacter hormaechei ATCC
49162]
gi|333391603|gb|EGK62716.1| cytidine/uridine-specific hydrolase [Enterobacter hormaechei ATCC
49162]
Length = 318
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L +
Sbjct: 88 VHGESGLDGPALPE--PDFAP-QNCTAVELMAKVLRESAEPVTLVATGPQTNVALLLNSY 144
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L NI I +MGGA+ +GN P AEFNIF DP AA
Sbjct: 145 PELHSNIAGIVIMGGAM-----------------GLGNW-----TPAAEFNIFVDPEAAE 182
Query: 176 TVLHSGIPVTIIPLDAT 192
V SG+P+ + LD T
Sbjct: 183 IVFQSGLPIVMAGLDVT 199
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 107/264 (40%), Gaps = 67/264 (25%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M +P++ D D D +AL+ L P +++K + S+ T+ V +L ++ R
Sbjct: 8 MAQPIILDCDPGHDDAIALVLALASPE--LDVKAVTSSAGNQTPDKTLRNVLRMLTLLKR 65
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV A G V P L R+L
Sbjct: 66 TDIPV------AGGAVKP-----------------------------LMREL------II 84
Query: 525 AENSVRFGASQDNDDPELRQP-------LAVDVWKSIV-ESIEPGSKITILTNGPLTNLA 576
A+N D P L +P AV++ ++ ES EP +T++ GP TN+A
Sbjct: 85 ADN---VHGESGLDGPALPEPDFAPQNCTAVELMAKVLRESAEP---VTLVATGPQTNVA 138
Query: 577 QII-GLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ S I + I+GG G N + AEFN+F+DP AA+ VF+S L
Sbjct: 139 LLLNSYPELHSNIAGIVIMGGAMGLGN---------WTPAAEFNIFVDPEAAEIVFQSGL 189
Query: 636 EIKLIPLHMQRRVASFFKILHKLR 659
I + L + R + + + R
Sbjct: 190 PIVMAGLDVTHRAQIMAQDIERFR 213
>gi|162463640|ref|NP_001105259.1| uncharacterized protein LOC542168 [Zea mays]
gi|46560602|gb|AAT00629.1| putative inosine-uridine preferring nucleoside hydrolase [Zea mays]
Length = 325
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 27/181 (14%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISA--GPITVFVMGSHTNFAIFLMN 114
+V+ + G+ FLP K + +A LIN +S G ++V +G TN A+ +
Sbjct: 89 FVHGSDGIGNLFLPAPSAKKV---EESAADFLINKVSEFPGEVSVLALGPLTNVALAIKR 145
Query: 115 NPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAA 174
+P ++ I V+GGA + GN+ NP AE NI DP AA
Sbjct: 146 DPSFASKVKKIVVLGGAFFA----------------AGNV-----NPAAEANIHGDPEAA 184
Query: 175 YTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPF 234
V SG + ++ ++ T + +++ +E R A + ++ K RD + S F
Sbjct: 185 DIVFTSGADIVVVGINITTQVCLTDEDLLEL-RNSKGKHAAFLYEMCKFYRDWHAKSDGF 243
Query: 235 H 235
H
Sbjct: 244 H 244
>gi|432371390|ref|ZP_19614451.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE11]
gi|430899993|gb|ELC22071.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE11]
Length = 311
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPEPA--FAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHNKIAQIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 108/267 (40%), Gaps = 73/267 (27%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPDKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV A G V P L RDL
Sbjct: 59 TDIPV------AGGAVKP-----------------------------LMRDL------II 77
Query: 525 AENSVRFGASQDNDDPELRQP-------LAVDVW-KSIVESIEPGSKITILTNGPLTNLA 576
A+N D P L +P AV++ K++ ES EP +TI++ GP TN+A
Sbjct: 78 ADN---VHGESGLDGPALPEPAFAPQNCTAVELMAKTLRESAEP---VTIVSTGPQTNVA 131
Query: 577 QIIG----LQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFE 632
++ L N I + I+GG G N + AEFN+++DP AA+ VF+
Sbjct: 132 LLLNSHPELHNK---IAQIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQ 179
Query: 633 SKLEIKLIPLHMQRRVASFFKILHKLR 659
S + + + L + + + + R
Sbjct: 180 SGIPVVMAGLDVTHKAQIHVEDTERFR 206
>gi|418896628|ref|ZP_13450703.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIGC341D]
gi|377762850|gb|EHT86711.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIGC341D]
Length = 305
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 73/173 (42%), Gaps = 34/173 (19%)
Query: 78 PLRQPTA---QQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAI 132
P RQ A V+IN + S P+T+ G TN A L+ P + ++IE I +MGG
Sbjct: 91 PSRQAVAMPASDVIINKVMTSDTPVTIVATGPLTNVATALIREPRIAEHIESITLMGGG- 149
Query: 133 RSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
+ GN P AEFNI+ D AA V SGI + + LD T
Sbjct: 150 -----------------TFGNW-----TPTAEFNIWVDAEAAKRVFESGITINVFGLDVT 187
Query: 193 KTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWS-----GSPPFHEAYCM 240
+ E+ FE N AQ+ + L+ + T+ P H+A +
Sbjct: 188 HQVLADEHVIERFESINNPV-AQFVVELLQFFKKTYKTHFNMDGGPIHDACTI 239
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 18/154 (11%)
Query: 538 DDPEL-----RQPLAVDVWKSIVESI-EPGSKITILTNGPLTNLAQ-IIGLQNSSSVIQD 590
D P+L RQ +A+ I+ + + +TI+ GPLTN+A +I + I+
Sbjct: 83 DGPKLPSTPSRQAVAMPASDVIINKVMTSDTPVTIVATGPLTNVATALIREPRIAEHIES 142
Query: 591 VYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVAS 650
+ ++GG GN + AEFN+++D AAK VFES + I + L + +V +
Sbjct: 143 ITLMGGGT-----FGN-----WTPTAEFNIWVDAEAAKRVFESGITINVFGLDVTHQVLA 192
Query: 651 FFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSH 684
++ + + P + F LLQ ++H
Sbjct: 193 DEHVIERF-ESINNPVAQFVVELLQFFKKTYKTH 225
>gi|385780524|ref|YP_005756695.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus 11819-97]
gi|418573785|ref|ZP_13137966.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus 21333]
gi|364521513|gb|AEW64263.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus 11819-97]
gi|371980850|gb|EHO98049.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus 21333]
Length = 311
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 74/173 (42%), Gaps = 34/173 (19%)
Query: 78 PLRQPTA---QQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAI 132
P RQ A V+IN + S P+T+ G TN A L+ P + ++IE I +MGG
Sbjct: 97 PSRQAVAMPASDVIINKVMTSDTPVTIVATGPLTNVATALIREPRIAEHIESITLMGGG- 155
Query: 133 RSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
+ GN P AEFNI+ D AA V SGI + + LD T
Sbjct: 156 -----------------TFGNW-----TPTAEFNIWVDAEAAKRVFESGITINVFGLDVT 193
Query: 193 KTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWS-----GSPPFHEAYCM 240
+ ++ FE N+ AQ+ + L+ + T+ P H+A +
Sbjct: 194 HQVLADDHVIERFESINNSV-AQFVVELLQFFKKTYKTHFNMDGGPIHDACTI 245
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 123/290 (42%), Gaps = 58/290 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYL--LKLPVELINLKGILVSSTGWATSATVDVVYDLLHMM 462
M + ++ D D D +ALI + P+E++ + + + + ++L +M
Sbjct: 1 MKRKIIMDCDPGHDDAIALILAGAIDSPLEILAVTTV---AGNQSVDKNTTNALNVLDIM 57
Query: 463 GRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRR 522
GR DI V G P I +A I SG LD LP +P R
Sbjct: 58 GRQDIAVAKG---------ADRPLIKPAAFASEIHGESG--LD-------GPKLPSTPSR 99
Query: 523 YTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQ-IIGL 581
+ P + + ++ S P +TI+ GPLTN+A +I
Sbjct: 100 QA-----------------VAMPASDVIINKVMTSDTP---VTIVATGPLTNVATALIRE 139
Query: 582 QNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
+ I+ + ++GG GN + AEFN+++D AAK VFES + I +
Sbjct: 140 PRIAEHIESITLMGGGTF-----GN-----WTPTAEFNIWVDAEAAKRVFESGITINVFG 189
Query: 642 LHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVD 691
L + +V + ++ +R ++ + +Q +++ L ++++ ++ ++D
Sbjct: 190 LDVTHQVLADDHVI----ERFESINNSVAQFVVELLQFFKKTYKTHFNMD 235
>gi|417516772|ref|ZP_12179599.1| Inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Uganda str. R8-3404]
gi|353653449|gb|EHC94983.1| Inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Uganda str. R8-3404]
Length = 270
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 60/128 (46%), Gaps = 33/128 (25%)
Query: 67 AFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEH 124
+F PQ G TA +++ + SA P+T+ G TN A+ L ++P L I
Sbjct: 96 SFAPQSG---------TAVELMAKTLRESAQPVTIVSTGPQTNVALLLNSHPELHTKIAS 146
Query: 125 IYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPV 184
I +MGGA+ ++GN P AEFNI+ DP AA V SGIPV
Sbjct: 147 IVIMGGAM-----------------ALGNW-----TPAAEFNIYVDPEAAEIVFQSGIPV 184
Query: 185 TIIPLDAT 192
+ LD T
Sbjct: 185 VMAGLDVT 192
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 100/237 (42%), Gaps = 53/237 (22%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + +K I S+ T+ V +L ++ R
Sbjct: 1 MALPIIIDCDPGHDDAIALVLALASPE--LEVKAITSSAGNQTPEKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 PDIPV------AGGAVKPLM----------------RELIIADNVHGESGLDGPALP--- 93
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
E S A Q EL + K++ ES +P +TI++ GP TN+A ++
Sbjct: 94 --EPSF---APQSGTAVEL-------MAKTLRESAQP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKL 639
+ I + I+GG N + AEFN+++DP AA+ VF+S + + +
Sbjct: 139 ELHTKIASIVIMGGAMALGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVM 186
>gi|312970725|ref|ZP_07784906.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli 1827-70]
gi|310337374|gb|EFQ02512.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli 1827-70]
Length = 260
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA PIT+ G TN A+ L ++
Sbjct: 30 VHGESGLDGPALPEPA--FAP-QNCTAVELMAKTLRESAEPITIVSTGPQTNVALLLNSH 86
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 87 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 124
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 125 IVFQSGIPVVMAGLDVT 141
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 13/109 (11%)
Query: 552 KSIVESIEPGSKITILTNGPLTNLAQIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTV 610
K++ ES EP ITI++ GP TN+A ++ S I + I+GG G N
Sbjct: 59 KTLRESAEP---ITIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGLGN-------- 107
Query: 611 PSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLR 659
+ AEFN+++DP AA+ VF+S + + + L + R + + R
Sbjct: 108 -WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGLDVTHRAQIHVEDTERFR 155
>gi|293418763|ref|ZP_06661198.1| rihA [Escherichia coli B088]
gi|291325291|gb|EFE64706.1| rihA [Escherichia coli B088]
Length = 311
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPEPA--FAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 106/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P ++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--FDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAVKPLMREL----------------IIADNVHGESGLDGPALPEPA 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVELMA-------KTLRESAEP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHVEDTERFR 206
>gi|432945809|ref|ZP_20141591.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE196]
gi|433042157|ref|ZP_20229686.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE117]
gi|431462496|gb|ELH42707.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE196]
gi|431559779|gb|ELI33317.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE117]
Length = 311
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPEPA--FAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 106/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAVKPLM----------------RELIIADNVHGESGLDGPALPEPA 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVELMA-------KTLRESAEP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHVEDTERFR 206
>gi|385233169|ref|YP_005794511.1| pyrimidine-specific ribonucleoside hydrolase RihA
[Ketogulonicigenium vulgare WSH-001]
gi|343462080|gb|AEM40515.1| Pyrimidine-specific ribonucleoside hydrolase RihA
[Ketogulonicigenium vulgare WSH-001]
Length = 313
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 107/252 (42%), Gaps = 46/252 (18%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
++ D D D LA++ L P E I + GI+ + T V +L + GR DIP
Sbjct: 6 IIIDTDPGQDDALAILLALGSPAE-IEVLGIVAVGGNVPLTRTSRNVRTVLELAGRTDIP 64
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V G P P+ ++ G+ G L G A P P + ++
Sbjct: 65 V------YEGHAVPMLRPLATAEHVH----GATG------LDGAALPEPEMPIMH--KHG 106
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVI 588
V F +D ++ EP +T+ T GPLT++AQ + + +I
Sbjct: 107 VDF---------------IIDTLRA-----EPADTVTLCTLGPLTDIAQ--AFRRAPDII 144
Query: 589 QDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
V V G E GN+ + AEFN+++DP AAK VF + + + L+PL + +
Sbjct: 145 PRVKRVVSMGGAYFEVGNI-----TPAAEFNIWVDPEAAKVVFGAGVPLTLVPLDVTHQA 199
Query: 649 ASFFKILHKLRD 660
+ + + + RD
Sbjct: 200 LTTRERVQRFRD 211
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 27/145 (18%)
Query: 51 PVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP---ITVFVMGSHTN 107
P+ +V+ GL A LP+ P+ +I+ + A P +T+ +G T+
Sbjct: 76 PLATAEHVHGATGLDGAALPE---PEMPIMHKHGVDFIIDTLRAEPADTVTLCTLGPLTD 132
Query: 108 FAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNI 167
A P + ++ + MGGA +GN+ P AEFNI
Sbjct: 133 IAQAFRRAPDIIPRVKRVVSMGGAYFE----------------VGNI-----TPAAEFNI 171
Query: 168 FSDPFAAYTVLHSGIPVTIIPLDAT 192
+ DP AA V +G+P+T++PLD T
Sbjct: 172 WVDPEAAKVVFGAGVPLTLVPLDVT 196
>gi|221140779|ref|ZP_03565272.1| putative inosine-uridine preferring nucleoside hydrolase
[Staphylococcus aureus subsp. aureus str. JKD6009]
gi|257424379|ref|ZP_05600808.1| purine nucleosidase [Staphylococcus aureus subsp. aureus 55/2053]
gi|257427050|ref|ZP_05603452.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus 65-1322]
gi|257429686|ref|ZP_05606073.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257432333|ref|ZP_05608696.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus E1410]
gi|257435293|ref|ZP_05611344.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus M876]
gi|282912472|ref|ZP_06320268.1| purine nucleosidase [Staphylococcus aureus subsp. aureus WBG10049]
gi|282913091|ref|ZP_06320883.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus M899]
gi|282921538|ref|ZP_06329256.1| purine nucleosidase [Staphylococcus aureus subsp. aureus C427]
gi|282922718|ref|ZP_06330408.1| purine nucleosidase [Staphylococcus aureus subsp. aureus C101]
gi|293498143|ref|ZP_06665997.1| purine nucleosidase [Staphylococcus aureus subsp. aureus 58-424]
gi|293511734|ref|ZP_06670428.1| purine nucleosidase [Staphylococcus aureus subsp. aureus M809]
gi|293550344|ref|ZP_06673016.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus M1015]
gi|304380199|ref|ZP_07362919.1| cytidine/uridine-specific hydrolase [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|384860884|ref|YP_005743604.1| inosine/uridine-preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus str. JKD6008]
gi|384866146|ref|YP_005746342.1| cytidine/uridine-specific hydrolase [Staphylococcus aureus subsp.
aureus TCH60]
gi|384868799|ref|YP_005751513.1| ribosylpyrimidine nucleosidase [Staphylococcus aureus subsp. aureus
T0131]
gi|387141874|ref|YP_005730267.1| putative inosine-uridine preferring nucleosidehydrolase
[Staphylococcus aureus subsp. aureus TW20]
gi|417887354|ref|ZP_12531482.1| cytidine/uridine-specific hydrolase [Staphylococcus aureus subsp.
aureus 21195]
gi|418280970|ref|ZP_12893790.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus 21178]
gi|418870691|ref|ZP_13425100.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus IS-125]
gi|418948722|ref|ZP_13501010.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus IS-157]
gi|418954114|ref|ZP_13506090.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus IS-189]
gi|424783992|ref|ZP_18210810.1| Inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus CN79]
gi|257273397|gb|EEV05499.1| purine nucleosidase [Staphylococcus aureus subsp. aureus 55/2053]
gi|257276681|gb|EEV08132.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus 65-1322]
gi|257280167|gb|EEV10754.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257283212|gb|EEV13344.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus E1410]
gi|257285889|gb|EEV16005.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus M876]
gi|269939761|emb|CBI48129.1| putative inosine-uridine preferring nucleosidehydrolase
[Staphylococcus aureus subsp. aureus TW20]
gi|282314939|gb|EFB45325.1| purine nucleosidase [Staphylococcus aureus subsp. aureus C101]
gi|282315953|gb|EFB46337.1| purine nucleosidase [Staphylococcus aureus subsp. aureus C427]
gi|282323191|gb|EFB53510.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus M899]
gi|282324168|gb|EFB54484.1| purine nucleosidase [Staphylococcus aureus subsp. aureus WBG10049]
gi|290919391|gb|EFD96467.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus M1015]
gi|291097074|gb|EFE27332.1| purine nucleosidase [Staphylococcus aureus subsp. aureus 58-424]
gi|291465692|gb|EFF08224.1| purine nucleosidase [Staphylococcus aureus subsp. aureus M809]
gi|302750113|gb|ADL64290.1| inosine/uridine-preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus str. JKD6008]
gi|304341180|gb|EFM07099.1| cytidine/uridine-specific hydrolase [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|312436651|gb|ADQ75722.1| cytidine/uridine-specific hydrolase [Staphylococcus aureus subsp.
aureus TCH60]
gi|329312934|gb|AEB87347.1| Ribosylpyrimidine nucleosidase [Staphylococcus aureus subsp. aureus
T0131]
gi|341857942|gb|EGS98747.1| cytidine/uridine-specific hydrolase [Staphylococcus aureus subsp.
aureus 21195]
gi|365166487|gb|EHM58152.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus 21178]
gi|375370174|gb|EHS74004.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus IS-125]
gi|375371061|gb|EHS74850.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus IS-157]
gi|375373454|gb|EHS77124.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus IS-189]
gi|421957737|gb|EKU10055.1| Inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus CN79]
Length = 311
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 81/200 (40%), Gaps = 39/200 (19%)
Query: 51 PVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTA---QQVLINAI--SAGPITVFVMGSH 105
PV ++ GL LP P RQ A V+IN + S P+T+ G
Sbjct: 75 PVAFASEIHGESGLDGPKLPS-----TPSRQAVAMPASDVIINKVMTSDTPVTIVATGPL 129
Query: 106 TNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEF 165
TN A L+ P + ++IE I +MGG + GN P AEF
Sbjct: 130 TNVATALIREPRIAEHIESITLMGGG------------------TFGNW-----TPTAEF 166
Query: 166 NIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIR 225
NI+ D AA V SGI + + LD T + E+ FE N AQ+ + L+ +
Sbjct: 167 NIWVDAEAAKRVFESGITINVFGLDVTHQVLADEHVIERFESINNPV-AQFVVELLQFFK 225
Query: 226 DTWS-----GSPPFHEAYCM 240
T+ P H+A +
Sbjct: 226 KTYKTHFNMDGGPIHDACTI 245
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 116/283 (40%), Gaps = 55/283 (19%)
Query: 405 MGKPVVFDIDMSAGDFLALIYL--LKLPVELINLKGILVSSTGWATSATVDVVYDLLHMM 462
M + ++ D D D +ALI + P+E++ + + + + ++L +M
Sbjct: 1 MKRKIIMDCDPGHDDAIALILAGAIDSPLEILAVTTV---AGNQSVDKNTTNALNVLDIM 57
Query: 463 GRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRR 522
GR DI V A G P P+ +A I SG LD LP +P R
Sbjct: 58 GRQDI------VVAKGADRPLIKPVA---FASEIHGESG--LD-------GPKLPSTPSR 99
Query: 523 YTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQ-IIGL 581
+ P + + ++ S P +TI+ GPLTN+A +I
Sbjct: 100 QA-----------------VAMPASDVIINKVMTSDTP---VTIVATGPLTNVATALIRE 139
Query: 582 QNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
+ I+ + ++GG GN + AEFN+++D AAK VFES + I +
Sbjct: 140 PRIAEHIESITLMGGGTF-----GN-----WTPTAEFNIWVDAEAAKRVFESGITINVFG 189
Query: 642 LHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSH 684
L + +V + ++ + + P + F LLQ ++H
Sbjct: 190 LDVTHQVLADEHVIERF-ESINNPVAQFVVELLQFFKKTYKTH 231
>gi|116493454|ref|YP_805189.1| ribonucleoside hydrolase RihC [Pediococcus pentosaceus ATCC 25745]
gi|421894886|ref|ZP_16325369.1| non-specific ribonucleoside hydrolase RihC [Pediococcus pentosaceus
IE-3]
gi|116103604|gb|ABJ68747.1| Inosine-uridine nucleoside N-ribohydrolase [Pediococcus pentosaceus
ATCC 25745]
gi|385272182|emb|CCG90741.1| non-specific ribonucleoside hydrolase RihC [Pediococcus pentosaceus
IE-3]
Length = 304
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 55/111 (49%), Gaps = 24/111 (21%)
Query: 84 AQQVLINAISAG--PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTN 141
A VL + I A PI + GS+TN A+ L +P +K IE I MGGAI
Sbjct: 103 AVDVLYHTIMANDEPIVLVPTGSYTNIAVLLTEHPDVKTKIEKIVAMGGAI--------- 153
Query: 142 SSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
+GN+ AEFN+F+DP AA + SGIPV ++ LD T
Sbjct: 154 --------GMGNM-----TSAAEFNVFTDPHAAEILYKSGIPVVMVGLDVT 191
>gi|331672183|ref|ZP_08372975.1| cytidine/uridine-specific hydrolase [Escherichia coli TA280]
gi|331070650|gb|EGI42013.1| cytidine/uridine-specific hydrolase [Escherichia coli TA280]
Length = 311
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPE--PTFAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L L +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIV--LALASSELDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAVKPLMREL----------------IIADNVHGESGLDGPALPEPT 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVELMA-------KTLRESAEP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHVEDTERFR 206
>gi|300823032|ref|ZP_07103166.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 119-7]
gi|331667005|ref|ZP_08367879.1| cytidine/uridine-specific hydrolase [Escherichia coli TA271]
gi|331676311|ref|ZP_08377023.1| cytidine/uridine-specific hydrolase [Escherichia coli H591]
gi|417225333|ref|ZP_12028624.1| cytidine/uridine-specific hydrolase [Escherichia coli 96.154]
gi|417267105|ref|ZP_12054466.1| cytidine/uridine-specific hydrolase [Escherichia coli 3.3884]
gi|417600992|ref|ZP_12251575.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli STEC_94C]
gi|417606762|ref|ZP_12257288.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli STEC_DG131-3]
gi|418945019|ref|ZP_13497967.1| ribonucleoside hydrolase 1 [Escherichia coli O157:H43 str. T22]
gi|418945026|ref|ZP_13497972.1| ribonucleoside hydrolase 1 [Escherichia coli O157:H43 str. T22]
gi|419948717|ref|ZP_14464988.1| ribonucleoside hydrolase 1 [Escherichia coli CUMT8]
gi|423708589|ref|ZP_17682967.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
B799]
gi|432375772|ref|ZP_19618784.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE12]
gi|432830617|ref|ZP_20064223.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE135]
gi|432833683|ref|ZP_20067229.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE136]
gi|432966765|ref|ZP_20155682.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE203]
gi|300524381|gb|EFK45450.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 119-7]
gi|331066229|gb|EGI38113.1| cytidine/uridine-specific hydrolase [Escherichia coli TA271]
gi|331076369|gb|EGI47651.1| cytidine/uridine-specific hydrolase [Escherichia coli H591]
gi|345353477|gb|EGW85710.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli STEC_94C]
gi|345364750|gb|EGW96871.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli STEC_DG131-3]
gi|375319660|gb|EHS65760.1| ribonucleoside hydrolase 1 [Escherichia coli O157:H43 str. T22]
gi|375319671|gb|EHS65768.1| ribonucleoside hydrolase 1 [Escherichia coli O157:H43 str. T22]
gi|385707926|gb|EIG44951.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
B799]
gi|386200381|gb|EIH99372.1| cytidine/uridine-specific hydrolase [Escherichia coli 96.154]
gi|386229463|gb|EII56818.1| cytidine/uridine-specific hydrolase [Escherichia coli 3.3884]
gi|388420793|gb|EIL80460.1| ribonucleoside hydrolase 1 [Escherichia coli CUMT8]
gi|430901145|gb|ELC23128.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE12]
gi|431379866|gb|ELG64776.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE135]
gi|431388182|gb|ELG71920.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE136]
gi|431473957|gb|ELH53780.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE203]
Length = 311
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPE--PTFAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAVKPLMREL----------------IIADNVHGESGLDGPALPEPT 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVELMA-------KTLRESAEP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHVEDTERFR 206
>gi|253730590|ref|ZP_04864755.1| ribosylpyrimidine nucleosidase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|417653953|ref|ZP_12303681.1| cytidine/uridine-specific hydrolase [Staphylococcus aureus subsp.
aureus 21193]
gi|417795685|ref|ZP_12442903.1| cytidine/uridine-specific hydrolase [Staphylococcus aureus subsp.
aureus 21305]
gi|418599876|ref|ZP_13163352.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus 21343]
gi|253725730|gb|EES94459.1| ribosylpyrimidine nucleosidase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|329732512|gb|EGG68862.1| cytidine/uridine-specific hydrolase [Staphylococcus aureus subsp.
aureus 21193]
gi|334270616|gb|EGL89016.1| cytidine/uridine-specific hydrolase [Staphylococcus aureus subsp.
aureus 21305]
gi|374395949|gb|EHQ67204.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus 21343]
Length = 311
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 74/173 (42%), Gaps = 34/173 (19%)
Query: 78 PLRQPTA---QQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAI 132
P RQ A V+IN + S P+T+ G TN A L+ P + ++IE I +MGG
Sbjct: 97 PSRQAVAMPASDVIINKVMTSDTPVTIVATGPLTNVATALIREPRIAEHIESITLMGGG- 155
Query: 133 RSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
+ GN P AEFNI+ D AA V SGI + + LD T
Sbjct: 156 -----------------TFGNW-----TPTAEFNIWVDAEAAKRVFESGITINVFGLDVT 193
Query: 193 KTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWS-----GSPPFHEAYCM 240
+ ++ FE N+ AQ+ + L+ + T+ P H+A +
Sbjct: 194 HQVLADDHVIERFESINNSV-AQFVVELLQFFKKTYKTHFNMDGGPIHDACTI 245
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 123/290 (42%), Gaps = 58/290 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYL--LKLPVELINLKGILVSSTGWATSATVDVVYDLLHMM 462
M + ++ D D D +ALI + P+E++ + + + + ++L +M
Sbjct: 1 MKRKIIMDCDPGHDDAIALILAGAIDSPLEILAVTTV---AGNQSVDKNTTNALNVLDIM 57
Query: 463 GRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRR 522
GR DI V G P I +A I SG LD LP +P R
Sbjct: 58 GRQDIAVAKG---------ADRPLIKPAAFASEIHGESG--LD-------GPKLPSTPSR 99
Query: 523 YTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQ-IIGL 581
+ P + + ++ S P +TI+ GPLTN+A +I
Sbjct: 100 QA-----------------VAMPASDVIINKVMTSDTP---VTIVATGPLTNVATALIRE 139
Query: 582 QNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
+ I+ + ++GG GN + AEFN+++D AAK VFES + I +
Sbjct: 140 PRIAEHIESITLMGGGTF-----GN-----WTPTAEFNIWVDAEAAKRVFESGITINVFG 189
Query: 642 LHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVD 691
L + +V + ++ +R ++ + +Q +++ L ++++ ++ ++D
Sbjct: 190 LDVTHQVLADDHVI----ERFESINNSVAQFVVELLQFFKKTYKTHFNMD 235
>gi|157156069|ref|YP_001461821.1| ribonucleoside hydrolase 1 [Escherichia coli E24377A]
gi|191168686|ref|ZP_03030466.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
B7A]
gi|193069094|ref|ZP_03050052.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
E110019]
gi|209917912|ref|YP_002291996.1| ribonucleoside hydrolase 1 [Escherichia coli SE11]
gi|218694091|ref|YP_002401758.1| ribonucleoside hydrolase 1 [Escherichia coli 55989]
gi|300907829|ref|ZP_07125445.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 84-1]
gi|300927244|ref|ZP_07142975.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 182-1]
gi|301302133|ref|ZP_07208266.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 124-1]
gi|301329180|ref|ZP_07222173.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 78-1]
gi|309795481|ref|ZP_07689898.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 145-7]
gi|331651664|ref|ZP_08352683.1| cytidine/uridine-specific hydrolase [Escherichia coli M718]
gi|407468079|ref|YP_006785479.1| ribonucleoside hydrolase 1 [Escherichia coli O104:H4 str.
2009EL-2071]
gi|407483190|ref|YP_006780339.1| ribonucleoside hydrolase 1 [Escherichia coli O104:H4 str.
2011C-3493]
gi|410483743|ref|YP_006771289.1| ribonucleoside hydrolase 1 [Escherichia coli O104:H4 str.
2009EL-2050]
gi|415827987|ref|ZP_11514709.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli OK1357]
gi|415864161|ref|ZP_11537284.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 85-1]
gi|416346263|ref|ZP_11679534.1| Inosine-uridine preferring nucleoside hydrolase [Escherichia coli
EC4100B]
gi|417153296|ref|ZP_11992087.1| cytidine/uridine-specific hydrolase [Escherichia coli 96.0497]
gi|417246652|ref|ZP_12039753.1| cytidine/uridine-specific hydrolase [Escherichia coli 9.0111]
gi|417579924|ref|ZP_12230743.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli STEC_B2F1]
gi|417627582|ref|ZP_12277829.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli STEC_MHI813]
gi|417637976|ref|ZP_12288146.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli TX1999]
gi|417665776|ref|ZP_12315341.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli STEC_O31]
gi|417803985|ref|ZP_12451019.1| ribonucleoside hydrolase 1 [Escherichia coli O104:H4 str. LB226692]
gi|417831739|ref|ZP_12478260.1| ribonucleoside hydrolase 1 [Escherichia coli O104:H4 str. 01-09591]
gi|417863886|ref|ZP_12508933.1| rihA [Escherichia coli O104:H4 str. C227-11]
gi|418042741|ref|ZP_12680931.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
W26]
gi|419168632|ref|ZP_13713029.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
DEC7A]
gi|419179625|ref|ZP_13723250.1| ribonucleoside hydrolase 1 [Escherichia coli DEC7C]
gi|419185187|ref|ZP_13728709.1| ribonucleoside hydrolase 1 [Escherichia coli DEC7D]
gi|419190434|ref|ZP_13733902.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
DEC7E]
gi|419276847|ref|ZP_13819110.1| ribonucleoside hydrolase 1 [Escherichia coli DEC10E]
gi|419344283|ref|ZP_13885666.1| ribonucleoside hydrolase 1 [Escherichia coli DEC13A]
gi|419348723|ref|ZP_13890076.1| ribonucleoside hydrolase 1 [Escherichia coli DEC13B]
gi|419353634|ref|ZP_13894918.1| ribonucleoside hydrolase 1 [Escherichia coli DEC13C]
gi|419358964|ref|ZP_13900195.1| ribonucleoside hydrolase 1 [Escherichia coli DEC13D]
gi|419363894|ref|ZP_13905076.1| ribonucleoside hydrolase 1 [Escherichia coli DEC13E]
gi|419368922|ref|ZP_13910051.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
DEC14A]
gi|419374321|ref|ZP_13915373.1| ribonucleoside hydrolase 1 [Escherichia coli DEC14B]
gi|419379599|ref|ZP_13920576.1| ribonucleoside hydrolase 1 [Escherichia coli DEC14C]
gi|419384804|ref|ZP_13925704.1| ribonucleoside hydrolase 1 [Escherichia coli DEC14D]
gi|419390053|ref|ZP_13930892.1| ribonucleoside hydrolase 1 [Escherichia coli DEC15A]
gi|419395229|ref|ZP_13936012.1| ribonucleoside hydrolase 1 [Escherichia coli DEC15B]
gi|419400577|ref|ZP_13941310.1| ribonucleoside hydrolase 1 [Escherichia coli DEC15C]
gi|419405753|ref|ZP_13946456.1| ribonucleoside hydrolase 1 [Escherichia coli DEC15D]
gi|419411244|ref|ZP_13951916.1| ribonucleoside hydrolase 1 [Escherichia coli DEC15E]
gi|422355986|ref|ZP_16436689.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 117-3]
gi|422763479|ref|ZP_16817234.1| inosine-uridine nucleoside hydrolase [Escherichia coli E1167]
gi|422777331|ref|ZP_16830984.1| inosine-uridine nucleoside hydrolase [Escherichia coli H120]
gi|422834715|ref|ZP_16882775.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
E101]
gi|422960531|ref|ZP_16971979.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
H494]
gi|422991342|ref|ZP_16982113.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. C227-11]
gi|422993282|ref|ZP_16984046.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. C236-11]
gi|422998492|ref|ZP_16989248.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. 09-7901]
gi|423006956|ref|ZP_16997699.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. 04-8351]
gi|423008599|ref|ZP_16999337.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. 11-3677]
gi|423022788|ref|ZP_17013491.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. 11-4404]
gi|423027939|ref|ZP_17018632.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. 11-4522]
gi|423033774|ref|ZP_17024458.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. 11-4623]
gi|423036641|ref|ZP_17027315.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. 11-4632 C1]
gi|423041760|ref|ZP_17032427.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. 11-4632 C2]
gi|423048448|ref|ZP_17039105.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. 11-4632 C3]
gi|423052031|ref|ZP_17040839.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. 11-4632 C4]
gi|423058997|ref|ZP_17047793.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. 11-4632 C5]
gi|427803723|ref|ZP_18970790.1| putative tRNA synthetase [Escherichia coli chi7122]
gi|427808314|ref|ZP_18975379.1| putative tRNA synthetase [Escherichia coli]
gi|429722826|ref|ZP_19257721.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. Ec11-9450]
gi|429774923|ref|ZP_19306926.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. 11-02030]
gi|429780188|ref|ZP_19312140.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. 11-02033-1]
gi|429784238|ref|ZP_19316151.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. 11-02092]
gi|429789576|ref|ZP_19321451.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. 11-02093]
gi|429795806|ref|ZP_19327632.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. 11-02281]
gi|429801732|ref|ZP_19333510.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. 11-02318]
gi|429805364|ref|ZP_19337111.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. 11-02913]
gi|429810175|ref|ZP_19341877.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. 11-03439]
gi|429815935|ref|ZP_19347594.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. 11-04080]
gi|429821523|ref|ZP_19353136.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. 11-03943]
gi|429907196|ref|ZP_19373165.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. Ec11-9990]
gi|429911392|ref|ZP_19377348.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. Ec11-9941]
gi|429917231|ref|ZP_19383171.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. Ec11-4984]
gi|429922269|ref|ZP_19388190.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. Ec11-5604]
gi|429928085|ref|ZP_19393991.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. Ec11-4986]
gi|429932015|ref|ZP_19397910.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. Ec11-4987]
gi|429933619|ref|ZP_19399509.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. Ec11-4988]
gi|429939275|ref|ZP_19405149.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. Ec11-5603]
gi|429946918|ref|ZP_19412773.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. Ec11-6006]
gi|429949550|ref|ZP_19415398.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. Ec12-0465]
gi|429957832|ref|ZP_19423661.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. Ec12-0466]
gi|432480043|ref|ZP_19722007.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE210]
gi|432673627|ref|ZP_19909122.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE142]
gi|432749097|ref|ZP_19983715.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE29]
gi|432763989|ref|ZP_19998439.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE48]
gi|432812767|ref|ZP_20046615.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE101]
gi|433090988|ref|ZP_20277290.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE138]
gi|433129018|ref|ZP_20314491.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE163]
gi|433133834|ref|ZP_20319212.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE166]
gi|443616688|ref|YP_007380544.1| ribonucleoside hydrolase 1 [Escherichia coli APEC O78]
gi|450211624|ref|ZP_21894401.1| ribonucleoside hydrolase 1 [Escherichia coli O08]
gi|166977467|sp|A7ZJ42.1|RIHA_ECO24 RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|226739276|sp|B6I163.1|RIHA_ECOSE RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|254797721|sp|B7L9J7.1|RIHA_ECO55 RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|157078099|gb|ABV17807.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
E24377A]
gi|190901278|gb|EDV61047.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
B7A]
gi|192957638|gb|EDV88083.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
E110019]
gi|209911171|dbj|BAG76245.1| putative purine nucleoside hydrolase [Escherichia coli SE11]
gi|218350823|emb|CAU96517.1| ribonucleoside hydrolase 1 [Escherichia coli 55989]
gi|300400461|gb|EFJ83999.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 84-1]
gi|300416794|gb|EFK00105.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 182-1]
gi|300842685|gb|EFK70445.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 124-1]
gi|300844485|gb|EFK72245.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 78-1]
gi|308120856|gb|EFO58118.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 145-7]
gi|315255043|gb|EFU35011.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 85-1]
gi|320198224|gb|EFW72828.1| Inosine-uridine preferring nucleoside hydrolase [Escherichia coli
EC4100B]
gi|323184994|gb|EFZ70361.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli OK1357]
gi|323945126|gb|EGB41188.1| inosine-uridine nucleoside hydrolase [Escherichia coli H120]
gi|324016082|gb|EGB85301.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 117-3]
gi|324116725|gb|EGC10640.1| inosine-uridine nucleoside hydrolase [Escherichia coli E1167]
gi|331049942|gb|EGI22000.1| cytidine/uridine-specific hydrolase [Escherichia coli M718]
gi|340735395|gb|EGR64452.1| ribonucleoside hydrolase 1 [Escherichia coli O104:H4 str. 01-09591]
gi|340741391|gb|EGR75538.1| ribonucleoside hydrolase 1 [Escherichia coli O104:H4 str. LB226692]
gi|341917175|gb|EGT66791.1| rihA [Escherichia coli O104:H4 str. C227-11]
gi|345343553|gb|EGW75939.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli STEC_B2F1]
gi|345377886|gb|EGX09817.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli STEC_MHI813]
gi|345395269|gb|EGX25018.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli TX1999]
gi|354858455|gb|EHF18906.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. 04-8351]
gi|354858563|gb|EHF19013.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. C227-11]
gi|354864357|gb|EHF24786.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. C236-11]
gi|354877360|gb|EHF37720.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. 09-7901]
gi|354879155|gb|EHF39496.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. 11-4404]
gi|354883568|gb|EHF43887.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. 11-3677]
gi|354885553|gb|EHF45850.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. 11-4522]
gi|354888239|gb|EHF48500.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. 11-4623]
gi|354901724|gb|EHF61851.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. 11-4632 C1]
gi|354904540|gb|EHF64631.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. 11-4632 C2]
gi|354907197|gb|EHF67262.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. 11-4632 C3]
gi|354918007|gb|EHF77968.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. 11-4632 C5]
gi|354921982|gb|EHF81901.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. 11-4632 C4]
gi|371593779|gb|EHN82655.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
H494]
gi|371613899|gb|EHO02387.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
E101]
gi|378018497|gb|EHV81354.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
DEC7A]
gi|378028086|gb|EHV90711.1| ribonucleoside hydrolase 1 [Escherichia coli DEC7C]
gi|378032605|gb|EHV95186.1| ribonucleoside hydrolase 1 [Escherichia coli DEC7D]
gi|378042537|gb|EHW04986.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
DEC7E]
gi|378133154|gb|EHW94501.1| ribonucleoside hydrolase 1 [Escherichia coli DEC10E]
gi|378189848|gb|EHX50437.1| ribonucleoside hydrolase 1 [Escherichia coli DEC13A]
gi|378204385|gb|EHX64801.1| ribonucleoside hydrolase 1 [Escherichia coli DEC13B]
gi|378208529|gb|EHX68913.1| ribonucleoside hydrolase 1 [Escherichia coli DEC13D]
gi|378208784|gb|EHX69164.1| ribonucleoside hydrolase 1 [Escherichia coli DEC13C]
gi|378219914|gb|EHX80181.1| ribonucleoside hydrolase 1 [Escherichia coli DEC13E]
gi|378222128|gb|EHX82370.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
DEC14A]
gi|378225499|gb|EHX85697.1| ribonucleoside hydrolase 1 [Escherichia coli DEC14B]
gi|378233357|gb|EHX93446.1| ribonucleoside hydrolase 1 [Escherichia coli DEC14C]
gi|378236669|gb|EHX96709.1| ribonucleoside hydrolase 1 [Escherichia coli DEC14D]
gi|378244855|gb|EHY04797.1| ribonucleoside hydrolase 1 [Escherichia coli DEC15A]
gi|378250706|gb|EHY10609.1| ribonucleoside hydrolase 1 [Escherichia coli DEC15B]
gi|378251637|gb|EHY11534.1| ribonucleoside hydrolase 1 [Escherichia coli DEC15C]
gi|378257482|gb|EHY17321.1| ribonucleoside hydrolase 1 [Escherichia coli DEC15D]
gi|378261165|gb|EHY20961.1| ribonucleoside hydrolase 1 [Escherichia coli DEC15E]
gi|383474406|gb|EID66395.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
W26]
gi|386170020|gb|EIH36528.1| cytidine/uridine-specific hydrolase [Escherichia coli 96.0497]
gi|386209280|gb|EII19767.1| cytidine/uridine-specific hydrolase [Escherichia coli 9.0111]
gi|397786700|gb|EJK97533.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli STEC_O31]
gi|406778905|gb|AFS58329.1| ribonucleoside hydrolase 1 [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407055487|gb|AFS75538.1| ribonucleoside hydrolase 1 [Escherichia coli O104:H4 str.
2011C-3493]
gi|407064114|gb|AFS85161.1| ribonucleoside hydrolase 1 [Escherichia coli O104:H4 str.
2009EL-2071]
gi|412961905|emb|CCK45817.1| putative tRNA synthetase [Escherichia coli chi7122]
gi|412968493|emb|CCJ43117.1| putative tRNA synthetase [Escherichia coli]
gi|429351739|gb|EKY88459.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. 11-02030]
gi|429351872|gb|EKY88591.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. 11-02033-1]
gi|429353200|gb|EKY89909.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. 11-02092]
gi|429367113|gb|EKZ03714.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. 11-02093]
gi|429368024|gb|EKZ04616.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. 11-02281]
gi|429370519|gb|EKZ07085.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. 11-02318]
gi|429382906|gb|EKZ19370.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. 11-02913]
gi|429385139|gb|EKZ21593.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. 11-03943]
gi|429385662|gb|EKZ22115.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. 11-03439]
gi|429397355|gb|EKZ33702.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. 11-04080]
gi|429398718|gb|EKZ35051.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. Ec11-9450]
gi|429398801|gb|EKZ35133.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. Ec11-9990]
gi|429409635|gb|EKZ45862.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. Ec11-4984]
gi|429411731|gb|EKZ47937.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. Ec11-4986]
gi|429418469|gb|EKZ54613.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. Ec11-4987]
gi|429428089|gb|EKZ64169.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. Ec11-5603]
gi|429429610|gb|EKZ65678.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. Ec11-4988]
gi|429435757|gb|EKZ71775.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. Ec11-5604]
gi|429439427|gb|EKZ75410.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. Ec12-0465]
gi|429444898|gb|EKZ80843.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. Ec11-6006]
gi|429450477|gb|EKZ86372.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. Ec12-0466]
gi|429456692|gb|EKZ92537.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O104:H4 str. Ec11-9941]
gi|431009892|gb|ELD24496.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE210]
gi|431217959|gb|ELF15445.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE142]
gi|431300114|gb|ELF89677.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE29]
gi|431313097|gb|ELG01076.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE48]
gi|431357095|gb|ELG43769.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE101]
gi|431614378|gb|ELI83533.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE138]
gi|431651368|gb|ELJ18629.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE163]
gi|431662428|gb|ELJ29203.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE166]
gi|443421196|gb|AGC86100.1| ribonucleoside hydrolase 1 [Escherichia coli APEC O78]
gi|449322423|gb|EMD12415.1| ribonucleoside hydrolase 1 [Escherichia coli O08]
Length = 311
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPEPA--FAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAVKPLMREL----------------IIADNVHGESGLDGPALPEPA 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVELMA-------KTLRESAEP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHVEDTERFR 206
>gi|432390641|ref|ZP_19633501.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE21]
gi|430922259|gb|ELC43019.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE21]
Length = 311
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPE--PTFAP-QNCTAVELMAKTLRESAKPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 107/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAVKPLMREL----------------IIADNVHGESGLDGPALPEPT 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES +P +TI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVELMA-------KTLRESAKP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHVEDTERFR 206
>gi|416896154|ref|ZP_11926018.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli STEC_7v]
gi|417118505|ref|ZP_11969023.1| cytidine/uridine-specific hydrolase [Escherichia coli 1.2741]
gi|422800011|ref|ZP_16848509.1| inosine-uridine nucleoside hydrolase [Escherichia coli M863]
gi|323967598|gb|EGB63014.1| inosine-uridine nucleoside hydrolase [Escherichia coli M863]
gi|327254336|gb|EGE65958.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli STEC_7v]
gi|386138039|gb|EIG79199.1| cytidine/uridine-specific hydrolase [Escherichia coli 1.2741]
Length = 311
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPE--PTFAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 104/245 (42%), Gaps = 53/245 (21%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAVKPLMREL----------------IIADNVHGESGLDGPALPEPT 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVELMA-------KTLRESAEP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRR 647
+ +
Sbjct: 190 DVTHK 194
>gi|293408777|ref|ZP_06652616.1| rihA [Escherichia coli B354]
gi|417139614|ref|ZP_11983036.1| cytidine/uridine-specific hydrolase [Escherichia coli 97.0259]
gi|417307130|ref|ZP_12094007.1| Pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PCN033]
gi|291471955|gb|EFF14438.1| rihA [Escherichia coli B354]
gi|338771307|gb|EGP26050.1| Pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PCN033]
gi|386157342|gb|EIH13684.1| cytidine/uridine-specific hydrolase [Escherichia coli 97.0259]
Length = 311
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPTLPE--PTFAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L L +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIV--LALASLELDVKAITSSAGNQTPEKTLRNVLRVLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAVKPLMREL----------------IIADNVHGESGLDGPTLPEPT 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVELMA-------KTLRESAEP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHVEDTERFR 206
>gi|417324976|ref|ZP_12111087.1| Inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Adelaide str. A4-669]
gi|353577486|gb|EHC39626.1| Inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Adelaide str. A4-669]
Length = 311
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 59/128 (46%), Gaps = 33/128 (25%)
Query: 67 AFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEH 124
+F PQ G TA +++ + SA P+T+ G TN A+ L ++P L I
Sbjct: 96 SFAPQSG---------TAVELMAKTLRESAQPVTIVSTGPQTNVALLLNSHPELHTKIAR 146
Query: 125 IYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPV 184
I +MGGA+ +GN P AEFNI+ DP AA V SGIPV
Sbjct: 147 IVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAEIVFQSGIPV 184
Query: 185 TIIPLDAT 192
+ LD T
Sbjct: 185 VMAGLDVT 192
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 112/271 (41%), Gaps = 53/271 (19%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + +K I S+ T+ V +L ++ R
Sbjct: 1 MALPIIIDCDPGHDDAIALVLALASPE--LEVKAITSSAGNQTPEKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 PDIPV------AGGAVKPLM----------------RELIIADNVHGESGLDGPALP--- 93
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
E S A Q EL K++ ES +P +TI++ GP TN+A ++
Sbjct: 94 --EPSF---APQSGTAVELMA-------KTLRESAQP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+ I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHTKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLRDRKKTPESVFSQRL 673
+ + + + RD ++ ++ L
Sbjct: 190 DVTHKAQIHAADIERFRDIGNPISTIVAELL 220
>gi|387611154|ref|YP_006114270.1| pyrimidine-specific ribonucleoside hydrolase
(cytidine/uridine-specific hydrolase) [Escherichia coli
ETEC H10407]
gi|309700890|emb|CBJ00187.1| pyrimidine-specific ribonucleoside hydrolase
(cytidine/uridine-specific hydrolase) [Escherichia coli
ETEC H10407]
Length = 311
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPE--PTFAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 106/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPR-SPRRY 523
DIPV A G V P + + +G L G A P +P+
Sbjct: 59 TDIPV------AGGAVKPLMREL----------IIAGNVHGESGLDGPALPEPTFAPQNC 102
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
TA V A K++ ES EP +TI++ GP TN+A ++
Sbjct: 103 TA---VELMA------------------KTLRESAEP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHVEDTERFR 206
>gi|224582496|ref|YP_002636294.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|254797723|sp|C0PW90.1|RIHA_SALPC RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|224467023|gb|ACN44853.1| probable nucleoside hydrolase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 311
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 59/128 (46%), Gaps = 33/128 (25%)
Query: 67 AFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEH 124
+F PQ G TA +++ + SA P+T+ G TN A+ L ++P L I
Sbjct: 96 SFAPQSG---------TAVELMAKTLRESAQPVTIVSTGPQTNVALLLNSHPELHTKIAR 146
Query: 125 IYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPV 184
I +MGGA+ +GN P AEFNI+ DP AA V SGIPV
Sbjct: 147 IVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAEIVFQSGIPV 184
Query: 185 TIIPLDAT 192
+ LD T
Sbjct: 185 VMAGLDVT 192
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 112/271 (41%), Gaps = 53/271 (19%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + +K I S+ T+ V +L ++ R
Sbjct: 1 MALPIIIDCDPGHDDAIALVLALASPE--LEVKAITSSAGNQTPEKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 PDIPV------AGGAVKPLM----------------RELIIADNVHGESGLDGPALP--- 93
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
E S A Q EL K++ ES +P +TI++ GP TN+A ++
Sbjct: 94 --EPSF---APQSGTAVELMA-------KTLRESAQP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+ I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHTKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLRDRKKTPESVFSQRL 673
+ + + + RD ++ ++ L
Sbjct: 190 DVTHKAQIHAADIERFRDIGNPISTIVAELL 220
>gi|442598946|ref|ZP_21016686.1| Inosine-uridine preferring nucleoside hydrolase [Escherichia coli
O5:K4(L):H4 str. ATCC 23502]
gi|441652322|emb|CCQ02183.1| Inosine-uridine preferring nucleoside hydrolase [Escherichia coli
O5:K4(L):H4 str. ATCC 23502]
Length = 231
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 69/148 (46%), Gaps = 31/148 (20%)
Query: 51 PVGQRLYVNTNY----GLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGS 104
P+ + L + N GL LP+ +AP + TA +++ + SA P+T+ G
Sbjct: 70 PLMRELIIADNVHGESGLDGPALPE--PTFAP-QNCTAVELMAKTLRESAEPVTIVSTGP 126
Query: 105 HTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAE 164
TN A+ L ++P L I I +MGGA+ +GN P AE
Sbjct: 127 QTNVALLLNSHPELHSKIARIVIMGGAM-----------------GLGNW-----TPAAE 164
Query: 165 FNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
FNI+ DP AA V SGIPV + LD T
Sbjct: 165 FNIYVDPEAAEIVFQSGIPVVMAGLDVT 192
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAVKPLM----------------RELIIADNVHGESGLDGPALPEPT 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL + K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVEL-------MAKTLRESAEP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHVEDTERFR 206
>gi|407709375|ref|YP_006793239.1| DNA glucosyllase [Burkholderia phenoliruptrix BR3459a]
gi|407238058|gb|AFT88256.1| DNA glucosyllase [Burkholderia phenoliruptrix BR3459a]
Length = 321
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMN 114
+++ + GL L G APL A + +I+ + A P +T+ +G TN A+ L +
Sbjct: 81 WIHGDNGLGNITL--GDSPAAPLDARPAHRFIIDTVRAHPGEVTLLAVGPLTNLALALAD 138
Query: 115 NPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAA 174
+P + ++ + VMGGA +D +GN+ P AE N+ DP AA
Sbjct: 139 DPQIAPLVKQVVVMGGAFGTDGV-------------LGNV-----TPAAEANVLGDPDAA 180
Query: 175 YTVLHSGIPVTIIPLDATKTIPVSENFFVEFERR 208
V + PV I+ LD T+ +S ++ R
Sbjct: 181 DIVFGAAWPVAIVGLDVTQRTIMSRDYLASIRDR 214
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 9/113 (7%)
Query: 552 KSIVESIE--PGSKITILTNGPLTNLAQIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVF 608
+ I++++ PG ++T+L GPLTNLA + + +++ V ++GG G D GNV
Sbjct: 108 RFIIDTVRAHPG-EVTLLAVGPLTNLALALADDPQIAPLVKQVVVMGGAFGTDGVLGNV- 165
Query: 609 TVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDR 661
+ AE N+ DP AA VF + + ++ L + +R L +RDR
Sbjct: 166 ----TPAAEANVLGDPDAADIVFGAAWPVAIVGLDVTQRTIMSRDYLASIRDR 214
>gi|417409443|ref|ZP_12158082.1| Inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Mississippi str.
A4-633]
gi|353627105|gb|EHC75487.1| Inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Mississippi str.
A4-633]
Length = 311
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 60/128 (46%), Gaps = 33/128 (25%)
Query: 67 AFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEH 124
+F PQ G TA +++ + SA P+T+ G TN A+ L ++P L I
Sbjct: 96 SFAPQSG---------TAVELMAKTLRESAQPVTIVSTGPQTNVALLLNSHPELHTKIAR 146
Query: 125 IYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPV 184
I +MGGA+ ++GN P AEFNI+ DP AA V SGIPV
Sbjct: 147 IVLMGGAM-----------------ALGNW-----TPAAEFNIYVDPEAAEIVFQSGIPV 184
Query: 185 TIIPLDAT 192
+ LD T
Sbjct: 185 VMAGLDVT 192
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 111/271 (40%), Gaps = 53/271 (19%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + +K I S+ T+ V +L ++ R
Sbjct: 1 MALPIIIDCDPGHDDAIALVLALASPE--LEVKAITSSAGNQTPDKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 PDIPV------AGGAVKPLM----------------RELIIADNVHGESGLDGPALP--- 93
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
E S A Q EL K++ ES +P +TI++ GP TN+A ++
Sbjct: 94 --EPSF---APQSGTAVELMA-------KTLRESAQP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+ I + ++GG N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHTKIARIVLMGGAMALGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLRDRKKTPESVFSQRL 673
+ + + + RD ++ ++ L
Sbjct: 190 DVTHKAQIHAADIERFRDIGNPISTIVAELL 220
>gi|74311187|ref|YP_309606.1| ribonucleoside hydrolase 1 [Shigella sonnei Ss046]
gi|218553193|ref|YP_002386106.1| ribonucleoside hydrolase 1 [Escherichia coli IAI1]
gi|260853902|ref|YP_003227793.1| ribonucleoside hydrolase 1 [Escherichia coli O26:H11 str. 11368]
gi|260866799|ref|YP_003233201.1| ribonucleoside hydrolase 1 [Escherichia coli O111:H- str. 11128]
gi|300817829|ref|ZP_07098043.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 107-1]
gi|307312633|ref|ZP_07592265.1| Ribosylpyrimidine nucleosidase [Escherichia coli W]
gi|378713969|ref|YP_005278862.1| ribosylpyrimidine nucleosidase [Escherichia coli KO11FL]
gi|383177225|ref|YP_005455230.1| ribonucleoside hydrolase 1 [Shigella sonnei 53G]
gi|386607989|ref|YP_006123475.1| ribonucleoside hydrolase 1 [Escherichia coli W]
gi|386702562|ref|YP_006166399.1| ribonucleoside hydrolase 1 [Escherichia coli KO11FL]
gi|386708434|ref|YP_006172155.1| ribonucleoside hydrolase 1 [Escherichia coli W]
gi|414574856|ref|ZP_11432065.1| pyrimidine-specific ribonucleoside hydrolase rihA [Shigella sonnei
3233-85]
gi|415789927|ref|ZP_11494790.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli EPECa14]
gi|415818980|ref|ZP_11508561.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli OK1180]
gi|415852600|ref|ZP_11528951.1| inosine-uridine preferring nucleoside hydrolase family protein
[Shigella sonnei 53G]
gi|415876298|ref|ZP_11542766.1| cytidine/uridine-specific hydrolase [Escherichia coli MS 79-10]
gi|417128680|ref|ZP_11975467.1| cytidine/uridine-specific hydrolase [Escherichia coli 97.0246]
gi|417132150|ref|ZP_11976935.1| cytidine/uridine-specific hydrolase [Escherichia coli 5.0588]
gi|417144200|ref|ZP_11986006.1| cytidine/uridine-specific hydrolase [Escherichia coli 1.2264]
gi|417193024|ref|ZP_12014871.1| cytidine/uridine-specific hydrolase [Escherichia coli 4.0522]
gi|417208897|ref|ZP_12020517.1| cytidine/uridine-specific hydrolase [Escherichia coli JB1-95]
gi|417229505|ref|ZP_12031091.1| cytidine/uridine-specific hydrolase [Escherichia coli 5.0959]
gi|417294423|ref|ZP_12081697.1| cytidine/uridine-specific hydrolase [Escherichia coli 900105 (10e)]
gi|417590345|ref|ZP_12241062.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli 2534-86]
gi|417595584|ref|ZP_12246248.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli 3030-1]
gi|418262681|ref|ZP_12884060.1| ribonucleoside hydrolase 1 [Shigella sonnei str. Moseley]
gi|419195764|ref|ZP_13739170.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
DEC8A]
gi|419201616|ref|ZP_13744843.1| ribonucleoside hydrolase 1 [Escherichia coli DEC8B]
gi|419207713|ref|ZP_13750839.1| ribonucleoside hydrolase 1 [Escherichia coli DEC8C]
gi|419214260|ref|ZP_13757290.1| ribonucleoside hydrolase 1 [Escherichia coli DEC8D]
gi|419219914|ref|ZP_13762870.1| ribonucleoside hydrolase 1 [Escherichia coli DEC8E]
gi|419225377|ref|ZP_13768264.1| ribonucleoside hydrolase 1 [Escherichia coli DEC9A]
gi|419231107|ref|ZP_13773898.1| ribonucleoside hydrolase 1 [Escherichia coli DEC9B]
gi|419236544|ref|ZP_13779293.1| ribonucleoside hydrolase 1 [Escherichia coli DEC9C]
gi|419242120|ref|ZP_13784768.1| ribonucleoside hydrolase 1 [Escherichia coli DEC9D]
gi|419247567|ref|ZP_13790179.1| ribonucleoside hydrolase 1 [Escherichia coli DEC9E]
gi|419259373|ref|ZP_13801827.1| ribonucleoside hydrolase 1 [Escherichia coli DEC10B]
gi|419265322|ref|ZP_13807708.1| ribonucleoside hydrolase 1 [Escherichia coli DEC10C]
gi|419271045|ref|ZP_13813375.1| ribonucleoside hydrolase 1 [Escherichia coli DEC10D]
gi|419282573|ref|ZP_13824790.1| ribonucleoside hydrolase 1 [Escherichia coli DEC10F]
gi|419806774|ref|ZP_14331866.1| Ribosylpyrimidine nucleosidase [Escherichia coli AI27]
gi|419863496|ref|ZP_14386024.1| ribonucleoside hydrolase 1 [Escherichia coli O103:H25 str. CVM9340]
gi|419875886|ref|ZP_14397689.1| ribonucleoside hydrolase 1 [Escherichia coli O111:H11 str. CVM9534]
gi|419882812|ref|ZP_14403999.1| ribonucleoside hydrolase 1 [Escherichia coli O111:H11 str. CVM9545]
gi|419892654|ref|ZP_14412666.1| ribonucleoside hydrolase 1 [Escherichia coli O111:H8 str. CVM9570]
gi|419897548|ref|ZP_14417131.1| ribonucleoside hydrolase 1 [Escherichia coli O111:H8 str. CVM9574]
gi|419901894|ref|ZP_14421197.1| ribonucleoside hydrolase 1 [Escherichia coli O26:H11 str. CVM9942]
gi|419906243|ref|ZP_14425166.1| ribosylpyrimidine nucleosidase [Escherichia coli O26:H11 str.
CVM10026]
gi|420087787|ref|ZP_14599724.1| ribonucleoside hydrolase 1 [Escherichia coli O111:H8 str. CVM9602]
gi|420093116|ref|ZP_14604795.1| ribonucleoside hydrolase 1 [Escherichia coli O111:H8 str. CVM9634]
gi|420099934|ref|ZP_14611136.1| ribonucleoside hydrolase 1 [Escherichia coli O111:H11 str. CVM9455]
gi|420108923|ref|ZP_14619133.1| ribonucleoside hydrolase 1 [Escherichia coli O111:H11 str. CVM9553]
gi|420117520|ref|ZP_14626877.1| ribonucleoside hydrolase 1 [Escherichia coli O26:H11 str. CVM10021]
gi|420119368|ref|ZP_14628655.1| ribonucleoside hydrolase 1 [Escherichia coli O26:H11 str. CVM10030]
gi|420125874|ref|ZP_14634654.1| ribonucleoside hydrolase 1 [Escherichia coli O26:H11 str. CVM10224]
gi|420130573|ref|ZP_14639064.1| ribonucleoside hydrolase 1 [Escherichia coli O26:H11 str. CVM9952]
gi|420357321|ref|ZP_14858336.1| pyrimidine-specific ribonucleoside hydrolase rihA [Shigella sonnei
3226-85]
gi|420362284|ref|ZP_14863206.1| ribonucleoside hydrolase 1 [Shigella sonnei 4822-66]
gi|424750271|ref|ZP_18178338.1| ribonucleoside hydrolase 1 [Escherichia coli O26:H11 str.
CFSAN001629]
gi|424760187|ref|ZP_18187822.1| ribonucleoside hydrolase 1 [Escherichia coli O111:H11 str.
CFSAN001630]
gi|424768235|ref|ZP_18195523.1| ribonucleoside hydrolase 1 [Escherichia coli O111:H8 str.
CFSAN001632]
gi|425377498|ref|ZP_18761890.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC1865]
gi|425421299|ref|ZP_18802514.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
0.1288]
gi|432804740|ref|ZP_20038685.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE91]
gi|432932996|ref|ZP_20132850.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE184]
gi|433192608|ref|ZP_20376625.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE90]
gi|85541757|sp|Q3Z4E1.1|RIHA_SHISS RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|226739274|sp|B7M5H8.1|RIHA_ECO8A RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|73854664|gb|AAZ87371.1| putative tRNA synthetase [Shigella sonnei Ss046]
gi|218359961|emb|CAQ97505.1| ribonucleoside hydrolase 1 [Escherichia coli IAI1]
gi|257752551|dbj|BAI24053.1| ribonucleoside hydrolase 1 [Escherichia coli O26:H11 str. 11368]
gi|257763155|dbj|BAI34650.1| ribonucleoside hydrolase 1 [Escherichia coli O111:H- str. 11128]
gi|300529526|gb|EFK50588.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 107-1]
gi|306907335|gb|EFN37840.1| Ribosylpyrimidine nucleosidase [Escherichia coli W]
gi|315059906|gb|ADT74233.1| ribonucleoside hydrolase 1 [Escherichia coli W]
gi|323153624|gb|EFZ39872.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli EPECa14]
gi|323163912|gb|EFZ49721.1| inosine-uridine preferring nucleoside hydrolase family protein
[Shigella sonnei 53G]
gi|323179872|gb|EFZ65429.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli OK1180]
gi|323379530|gb|ADX51798.1| Ribosylpyrimidine nucleosidase [Escherichia coli KO11FL]
gi|342928785|gb|EGU97507.1| cytidine/uridine-specific hydrolase [Escherichia coli MS 79-10]
gi|345344876|gb|EGW77235.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli 2534-86]
gi|345360106|gb|EGW92277.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli 3030-1]
gi|378052398|gb|EHW14706.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
DEC8A]
gi|378056524|gb|EHW18764.1| ribonucleoside hydrolase 1 [Escherichia coli DEC8B]
gi|378062234|gb|EHW24412.1| ribonucleoside hydrolase 1 [Escherichia coli DEC8C]
gi|378068188|gb|EHW30292.1| ribonucleoside hydrolase 1 [Escherichia coli DEC8D]
gi|378072273|gb|EHW34335.1| ribonucleoside hydrolase 1 [Escherichia coli DEC8E]
gi|378080965|gb|EHW42921.1| ribonucleoside hydrolase 1 [Escherichia coli DEC9A]
gi|378082101|gb|EHW44047.1| ribonucleoside hydrolase 1 [Escherichia coli DEC9B]
gi|378089767|gb|EHW51608.1| ribonucleoside hydrolase 1 [Escherichia coli DEC9C]
gi|378094383|gb|EHW56181.1| ribonucleoside hydrolase 1 [Escherichia coli DEC9D]
gi|378101460|gb|EHW63146.1| ribonucleoside hydrolase 1 [Escherichia coli DEC9E]
gi|378115697|gb|EHW77232.1| ribonucleoside hydrolase 1 [Escherichia coli DEC10B]
gi|378118374|gb|EHW79877.1| ribonucleoside hydrolase 1 [Escherichia coli DEC10C]
gi|378121361|gb|EHW82815.1| ribonucleoside hydrolase 1 [Escherichia coli DEC10D]
gi|378138932|gb|EHX00182.1| ribonucleoside hydrolase 1 [Escherichia coli DEC10F]
gi|383394089|gb|AFH19047.1| ribonucleoside hydrolase 1 [Escherichia coli KO11FL]
gi|383404126|gb|AFH10369.1| ribonucleoside hydrolase 1 [Escherichia coli W]
gi|384470223|gb|EIE54342.1| Ribosylpyrimidine nucleosidase [Escherichia coli AI27]
gi|386143636|gb|EIG90112.1| cytidine/uridine-specific hydrolase [Escherichia coli 97.0246]
gi|386150004|gb|EIH01293.1| cytidine/uridine-specific hydrolase [Escherichia coli 5.0588]
gi|386164083|gb|EIH25869.1| cytidine/uridine-specific hydrolase [Escherichia coli 1.2264]
gi|386190205|gb|EIH78953.1| cytidine/uridine-specific hydrolase [Escherichia coli 4.0522]
gi|386196424|gb|EIH90646.1| cytidine/uridine-specific hydrolase [Escherichia coli JB1-95]
gi|386205995|gb|EII10501.1| cytidine/uridine-specific hydrolase [Escherichia coli 5.0959]
gi|386262138|gb|EIJ17585.1| cytidine/uridine-specific hydrolase [Escherichia coli 900105 (10e)]
gi|388342379|gb|EIL08414.1| ribonucleoside hydrolase 1 [Escherichia coli O103:H25 str. CVM9340]
gi|388347051|gb|EIL12749.1| ribonucleoside hydrolase 1 [Escherichia coli O111:H11 str. CVM9534]
gi|388347253|gb|EIL12936.1| ribonucleoside hydrolase 1 [Escherichia coli O111:H8 str. CVM9570]
gi|388355093|gb|EIL19955.1| ribonucleoside hydrolase 1 [Escherichia coli O111:H8 str. CVM9574]
gi|388360470|gb|EIL24672.1| ribonucleoside hydrolase 1 [Escherichia coli O111:H11 str. CVM9545]
gi|388375194|gb|EIL38241.1| ribonucleoside hydrolase 1 [Escherichia coli O26:H11 str. CVM9942]
gi|388379649|gb|EIL42297.1| ribosylpyrimidine nucleosidase [Escherichia coli O26:H11 str.
CVM10026]
gi|391288402|gb|EIQ46907.1| pyrimidine-specific ribonucleoside hydrolase rihA [Shigella sonnei
3226-85]
gi|391289484|gb|EIQ47979.1| pyrimidine-specific ribonucleoside hydrolase rihA [Shigella sonnei
3233-85]
gi|391296376|gb|EIQ54470.1| ribonucleoside hydrolase 1 [Shigella sonnei 4822-66]
gi|394391887|gb|EJE68712.1| ribonucleoside hydrolase 1 [Escherichia coli O111:H8 str. CVM9602]
gi|394394308|gb|EJE70917.1| ribonucleoside hydrolase 1 [Escherichia coli O26:H11 str. CVM10224]
gi|394399553|gb|EJE75559.1| ribonucleoside hydrolase 1 [Escherichia coli O111:H8 str. CVM9634]
gi|394401988|gb|EJE77748.1| ribonucleoside hydrolase 1 [Escherichia coli O26:H11 str. CVM10021]
gi|394408507|gb|EJE83150.1| ribonucleoside hydrolase 1 [Escherichia coli O111:H11 str. CVM9553]
gi|394422053|gb|EJE95458.1| ribonucleoside hydrolase 1 [Escherichia coli O111:H11 str. CVM9455]
gi|394431685|gb|EJF03857.1| ribonucleoside hydrolase 1 [Escherichia coli O26:H11 str. CVM10030]
gi|394433570|gb|EJF05579.1| ribonucleoside hydrolase 1 [Escherichia coli O26:H11 str. CVM9952]
gi|397903218|gb|EJL19525.1| ribonucleoside hydrolase 1 [Shigella sonnei str. Moseley]
gi|408309654|gb|EKJ26805.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC1865]
gi|408347501|gb|EKJ61707.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
0.1288]
gi|421940923|gb|EKT98350.1| ribonucleoside hydrolase 1 [Escherichia coli O26:H11 str.
CFSAN001629]
gi|421946206|gb|EKU03352.1| ribonucleoside hydrolase 1 [Escherichia coli O111:H11 str.
CFSAN001630]
gi|421946540|gb|EKU03664.1| ribonucleoside hydrolase 1 [Escherichia coli O111:H8 str.
CFSAN001632]
gi|431357203|gb|ELG43876.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE91]
gi|431457029|gb|ELH37372.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE184]
gi|431720862|gb|ELJ84881.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE90]
Length = 311
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPE--PTFAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAVKPLMREL----------------IIADNVHGESGLDGPALPEPT 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVELMA-------KTLRESAEP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHVEDTERFR 206
>gi|218703985|ref|YP_002411504.1| ribonucleoside hydrolase 1 [Escherichia coli UMN026]
gi|293403913|ref|ZP_06647907.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
FVEC1412]
gi|298379688|ref|ZP_06989293.1| rihA [Escherichia coli FVEC1302]
gi|300901162|ref|ZP_07119267.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 198-1]
gi|331662017|ref|ZP_08362940.1| cytidine/uridine-specific hydrolase [Escherichia coli TA143]
gi|417585451|ref|ZP_12236228.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli STEC_C165-02]
gi|419936479|ref|ZP_14453491.1| ribonucleoside hydrolase 1 [Escherichia coli 576-1]
gi|432352566|ref|ZP_19595852.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE2]
gi|432400804|ref|ZP_19643559.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE26]
gi|432424857|ref|ZP_19667374.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE181]
gi|432459679|ref|ZP_19701837.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE204]
gi|432474717|ref|ZP_19716726.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE208]
gi|432488203|ref|ZP_19730090.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE213]
gi|432521353|ref|ZP_19758511.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE228]
gi|432536666|ref|ZP_19773585.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE235]
gi|432630282|ref|ZP_19866227.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE80]
gi|432639825|ref|ZP_19875666.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE83]
gi|432664892|ref|ZP_19900480.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE116]
gi|432773838|ref|ZP_20008125.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE54]
gi|432814194|ref|ZP_20047986.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE115]
gi|432838220|ref|ZP_20071710.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE140]
gi|432873279|ref|ZP_20092977.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE147]
gi|432884932|ref|ZP_20099612.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE158]
gi|432910937|ref|ZP_20117501.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE190]
gi|433017624|ref|ZP_20205890.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE105]
gi|433051974|ref|ZP_20239204.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE122]
gi|433066896|ref|ZP_20253729.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE128]
gi|433157633|ref|ZP_20342502.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE177]
gi|433177132|ref|ZP_20361587.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE82]
gi|433202144|ref|ZP_20385948.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE95]
gi|226739275|sp|B7N9Q7.1|RIHA_ECOLU RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|218431082|emb|CAR11958.1| ribonucleoside hydrolase 1 [Escherichia coli UMN026]
gi|291428499|gb|EFF01524.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
FVEC1412]
gi|298279386|gb|EFI20894.1| rihA [Escherichia coli FVEC1302]
gi|300355401|gb|EFJ71271.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 198-1]
gi|331060439|gb|EGI32403.1| cytidine/uridine-specific hydrolase [Escherichia coli TA143]
gi|345340968|gb|EGW73384.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli STEC_C165-02]
gi|388401148|gb|EIL61810.1| ribonucleoside hydrolase 1 [Escherichia coli 576-1]
gi|430878764|gb|ELC02150.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE2]
gi|430928571|gb|ELC49119.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE26]
gi|430958766|gb|ELC77343.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE181]
gi|430991631|gb|ELD08034.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE204]
gi|431009122|gb|ELD23746.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE208]
gi|431024039|gb|ELD37232.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE213]
gi|431044861|gb|ELD55118.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE228]
gi|431072983|gb|ELD80720.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE235]
gi|431173865|gb|ELE73935.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE80]
gi|431184781|gb|ELE84527.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE83]
gi|431203913|gb|ELF02502.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE116]
gi|431320388|gb|ELG08030.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE54]
gi|431367696|gb|ELG54171.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE115]
gi|431391478|gb|ELG75118.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE140]
gi|431405380|gb|ELG88623.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE147]
gi|431419411|gb|ELH01761.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE158]
gi|431444286|gb|ELH25309.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE190]
gi|431536748|gb|ELI12905.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE105]
gi|431575171|gb|ELI47918.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE122]
gi|431590266|gb|ELI61362.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE128]
gi|431681385|gb|ELJ47174.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE177]
gi|431709655|gb|ELJ74109.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE82]
gi|431725689|gb|ELJ89529.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE95]
Length = 311
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPE--PTFAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAVKPLMREL----------------IIADNVHGESGLDGPALPEPT 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVELMA-------KTLRESAEP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHVEDTERFR 206
>gi|195629752|gb|ACG36517.1| pyrimidine-specific ribonucleoside hydrolase rihA [Zea mays]
gi|380450563|gb|AFD54993.1| nucleoside N-ribohydrolase 2b [Zea mays subsp. mays]
gi|414870116|tpg|DAA48673.1| TPA: putative inosine-uridine preferring nucleoside hydrolase [Zea
mays]
Length = 325
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 27/181 (14%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISA--GPITVFVMGSHTNFAIFLMN 114
+V+ + G+ FLP K + +A LIN +S G ++V +G TN A+ +
Sbjct: 89 FVHGSDGIGNLFLPAPSAKKV---EESAADFLINKVSEFPGEVSVLALGPLTNVALAIKR 145
Query: 115 NPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAA 174
+P ++ I V+GGA + GN+ NP AE NI DP AA
Sbjct: 146 DPSFASKVKKIVVLGGAFFA----------------AGNV-----NPAAEANIHGDPEAA 184
Query: 175 YTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPF 234
V SG + ++ ++ T + +++ +E R A + ++ K RD + S F
Sbjct: 185 DIVFTSGADIVVVGINITTQVCLTDEDLLEL-RNSKGKHAAFLYEMCKFYRDWHAKSDGF 243
Query: 235 H 235
H
Sbjct: 244 H 244
>gi|16128634|ref|NP_415184.1| ribonucleoside hydrolase 1 [Escherichia coli str. K-12 substr.
MG1655]
gi|170080230|ref|YP_001729550.1| ribonucleoside hydrolase 1 [Escherichia coli str. K-12 substr.
DH10B]
gi|170080331|ref|YP_001729651.1| ribonucleoside hydrolase 1 [Escherichia coli str. K-12 substr.
DH10B]
gi|194439885|ref|ZP_03071948.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
101-1]
gi|238899928|ref|YP_002925724.1| ribonucleoside hydrolase 1 [Escherichia coli BW2952]
gi|251784148|ref|YP_002998452.1| ribonucleoside hydrolase [Escherichia coli BL21(DE3)]
gi|253774366|ref|YP_003037197.1| ribonucleoside hydrolase 1 [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254160729|ref|YP_003043837.1| ribonucleoside hydrolase 1 [Escherichia coli B str. REL606]
gi|254287517|ref|YP_003053265.1| ribonucleoside hydrolase 1 [Escherichia coli BL21(DE3)]
gi|300931586|ref|ZP_07146898.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 187-1]
gi|300951151|ref|ZP_07165015.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 116-1]
gi|300959225|ref|ZP_07171301.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 175-1]
gi|331641155|ref|ZP_08342290.1| cytidine/uridine-specific hydrolase [Escherichia coli H736]
gi|386279674|ref|ZP_10057352.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia sp.
4_1_40B]
gi|386596493|ref|YP_006092893.1| Purine nucleosidase [Escherichia coli DH1]
gi|386703834|ref|YP_006167681.1| Pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
P12b]
gi|387620394|ref|YP_006128021.1| ribonucleoside hydrolase 1 [Escherichia coli DH1]
gi|388476754|ref|YP_488942.1| ribonucleoside hydrolase 1 [Escherichia coli str. K-12 substr.
W3110]
gi|404373991|ref|ZP_10979214.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia sp.
1_1_43]
gi|417263715|ref|ZP_12051119.1| cytidine/uridine-specific hydrolase [Escherichia coli 2.3916]
gi|417274193|ref|ZP_12061533.1| cytidine/uridine-specific hydrolase [Escherichia coli 2.4168]
gi|417290005|ref|ZP_12077288.1| cytidine/uridine-specific hydrolase [Escherichia coli B41]
gi|417617046|ref|ZP_12267478.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli G58-1]
gi|417633122|ref|ZP_12283342.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli STEC_S1191]
gi|417947242|ref|ZP_12590437.1| ribonucleoside hydrolase 1 [Escherichia coli XH140A]
gi|417977506|ref|ZP_12618289.1| ribonucleoside hydrolase 1 [Escherichia coli XH001]
gi|418301515|ref|ZP_12913309.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli UMNF18]
gi|418959056|ref|ZP_13510958.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
J53]
gi|419141176|ref|ZP_13685931.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
DEC6A]
gi|419146423|ref|ZP_13691119.1| ribonucleoside hydrolase 1 [Escherichia coli DEC6B]
gi|419152528|ref|ZP_13697114.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
DEC6C]
gi|419162900|ref|ZP_13707379.1| ribonucleoside hydrolase 1 [Escherichia coli DEC6E]
gi|419812437|ref|ZP_14337303.1| ribonucleoside hydrolase 1 [Escherichia coli O32:H37 str. P4]
gi|419941185|ref|ZP_14457884.1| ribonucleoside hydrolase 1 [Escherichia coli 75]
gi|422765192|ref|ZP_16818919.1| inosine-uridine nucleoside hydrolase [Escherichia coli E1520]
gi|422769853|ref|ZP_16823544.1| inosine-uridine nucleoside hydrolase [Escherichia coli E482]
gi|422785257|ref|ZP_16837996.1| inosine-uridine nucleoside hydrolase [Escherichia coli H489]
gi|422791438|ref|ZP_16844141.1| inosine-uridine nucleoside hydrolase [Escherichia coli TA007]
gi|422816636|ref|ZP_16864851.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
M919]
gi|423701404|ref|ZP_17675863.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
H730]
gi|425114000|ref|ZP_18515830.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
8.0566]
gi|425118761|ref|ZP_18520490.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
8.0569]
gi|432415582|ref|ZP_19658213.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE44]
gi|432626207|ref|ZP_19862192.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE77]
gi|432635936|ref|ZP_19871822.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE81]
gi|432659889|ref|ZP_19895544.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE111]
gi|432684464|ref|ZP_19919782.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE156]
gi|432703200|ref|ZP_19938324.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE171]
gi|432736164|ref|ZP_19970939.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE42]
gi|432880120|ref|ZP_20096940.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE154]
gi|432953786|ref|ZP_20146056.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE197]
gi|433046787|ref|ZP_20234206.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE120]
gi|442595675|ref|ZP_21013518.1| Inosine-uridine preferring nucleoside hydrolase [Escherichia coli
O10:K5(L):H4 str. ATCC 23506]
gi|450240132|ref|ZP_21899264.1| ribonucleoside hydrolase 1 [Escherichia coli S17]
gi|2506789|sp|P41409.2|RIHA_ECOLI RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|259585633|sp|C4ZWD8.1|RIHA_ECOBW RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|1778569|gb|AAB40852.1| YaaF homolog [Escherichia coli]
gi|1786871|gb|AAC73752.1| ribonucleoside hydrolase 1 [Escherichia coli str. K-12 substr.
MG1655]
gi|4062271|dbj|BAA35303.1| ribonucleoside hydrolase 1 [Escherichia coli str. K12 substr.
W3110]
gi|169888065|gb|ACB01772.1| ribonucleoside hydrolase 1 [Escherichia coli str. K-12 substr.
DH10B]
gi|169888166|gb|ACB01873.1| ribonucleoside hydrolase 1 [Escherichia coli str. K-12 substr.
DH10B]
gi|194421179|gb|EDX37203.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
101-1]
gi|238863476|gb|ACR65474.1| ribonucleoside hydrolase 1 [Escherichia coli BW2952]
gi|242376421|emb|CAQ31123.1| ribonucleoside hydrolase [Escherichia coli BL21(DE3)]
gi|253325410|gb|ACT30012.1| Ribosylpyrimidine nucleosidase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253972630|gb|ACT38301.1| ribonucleoside hydrolase 1 [Escherichia coli B str. REL606]
gi|253976824|gb|ACT42494.1| ribonucleoside hydrolase 1 [Escherichia coli BL21(DE3)]
gi|260450182|gb|ACX40604.1| Purine nucleosidase [Escherichia coli DH1]
gi|300314170|gb|EFJ63954.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 175-1]
gi|300449580|gb|EFK13200.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 116-1]
gi|300460610|gb|EFK24103.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 187-1]
gi|315135317|dbj|BAJ42476.1| ribonucleoside hydrolase 1 [Escherichia coli DH1]
gi|323938413|gb|EGB34667.1| inosine-uridine nucleoside hydrolase [Escherichia coli E1520]
gi|323943066|gb|EGB39225.1| inosine-uridine nucleoside hydrolase [Escherichia coli E482]
gi|323963219|gb|EGB58787.1| inosine-uridine nucleoside hydrolase [Escherichia coli H489]
gi|323972106|gb|EGB67320.1| inosine-uridine nucleoside hydrolase [Escherichia coli TA007]
gi|331037953|gb|EGI10173.1| cytidine/uridine-specific hydrolase [Escherichia coli H736]
gi|339413613|gb|AEJ55285.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli UMNF18]
gi|342361011|gb|EGU25163.1| ribonucleoside hydrolase 1 [Escherichia coli XH140A]
gi|344192782|gb|EGV46869.1| ribonucleoside hydrolase 1 [Escherichia coli XH001]
gi|345380920|gb|EGX12812.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli G58-1]
gi|345390792|gb|EGX20589.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli STEC_S1191]
gi|359331368|dbj|BAL37815.1| ribonucleoside hydrolase 1 [Escherichia coli str. K-12 substr.
MDS42]
gi|377999391|gb|EHV62474.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
DEC6A]
gi|378001351|gb|EHV64410.1| ribonucleoside hydrolase 1 [Escherichia coli DEC6B]
gi|378003266|gb|EHV66311.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
DEC6C]
gi|378016490|gb|EHV79371.1| ribonucleoside hydrolase 1 [Escherichia coli DEC6E]
gi|383102002|gb|AFG39511.1| Pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
P12b]
gi|384378085|gb|EIE35974.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
J53]
gi|385154644|gb|EIF16654.1| ribonucleoside hydrolase 1 [Escherichia coli O32:H37 str. P4]
gi|385540109|gb|EIF86936.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
M919]
gi|385712758|gb|EIG49700.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
H730]
gi|386123226|gb|EIG71825.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia sp.
4_1_40B]
gi|386222603|gb|EII45022.1| cytidine/uridine-specific hydrolase [Escherichia coli 2.3916]
gi|386232621|gb|EII64606.1| cytidine/uridine-specific hydrolase [Escherichia coli 2.4168]
gi|386256043|gb|EIJ05731.1| cytidine/uridine-specific hydrolase [Escherichia coli B41]
gi|388401293|gb|EIL61949.1| ribonucleoside hydrolase 1 [Escherichia coli 75]
gi|404292478|gb|EJZ49298.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia sp.
1_1_43]
gi|408572546|gb|EKK48435.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
8.0566]
gi|408573352|gb|EKK49208.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
8.0569]
gi|430943958|gb|ELC64064.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE44]
gi|431165342|gb|ELE65700.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE77]
gi|431174218|gb|ELE74279.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE81]
gi|431203252|gb|ELF01928.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE111]
gi|431224882|gb|ELF22092.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE156]
gi|431246741|gb|ELF40994.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE171]
gi|431286760|gb|ELF77584.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE42]
gi|431413744|gb|ELG96509.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE154]
gi|431470282|gb|ELH50205.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE197]
gi|431571920|gb|ELI44789.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE120]
gi|441604226|emb|CCP98652.1| Inosine-uridine preferring nucleoside hydrolase [Escherichia coli
O10:K5(L):H4 str. ATCC 23506]
gi|449324752|gb|EMD14676.1| ribonucleoside hydrolase 1 [Escherichia coli S17]
Length = 311
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPE--PTFAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAVKPLMREL----------------IIADNVHGESGLDGPALPEPT 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVELMA-------KTLRESAEP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHVEDTERFR 206
>gi|422590586|ref|ZP_16665240.1| inosine-uridine preferring nucleoside hydrolase [Pseudomonas
syringae pv. morsprunorum str. M302280]
gi|330877725|gb|EGH11874.1| inosine-uridine preferring nucleoside hydrolase [Pseudomonas
syringae pv. morsprunorum str. M302280]
Length = 330
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 127/289 (43%), Gaps = 35/289 (12%)
Query: 434 INLKGILVSSTGWATSATVDVVYDLLHMMGRDDIPVGLGDVFAVGEVNPKFPPIGGCKYA 493
+N K I+ + GW D V + ++M R DI + V GE + + G A
Sbjct: 1 MNRKVIIDTDMGW------DDVLSIAYLMKRPDIDIIGITVTGCGETDVGW----GVIIA 50
Query: 494 KAIPLGSGGFLDSDTLYGLARDLP---RSPRRYTAENSVRFGASQDNDDPELRQPLAVDV 550
+ + LG G LD+ G + L R P+ + + + G + L Q +
Sbjct: 51 QHL-LGIGNQLDTVVARGTDQPLEYDNRFPQPFKNDMNDVMGLLGTLNPAALPQVSTLSA 109
Query: 551 WKSIVESIEPG-SKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFT 609
W+ + ++++ KIT+L+ G TN+A ++ L + + +Q + + G GNV
Sbjct: 110 WEFMYQTVKNSQDKITVLSLGGFTNIANMLSLSSQPTDLQMIDQIVAMAGAVYVDGNVAA 169
Query: 610 V-------------PSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILH 656
+ S+ YAE+N+F+DP+AA VF S L + L+PL + +V IL
Sbjct: 170 LNDVQPAWDQGESYRSNHYAEWNVFVDPVAANIVFGSSLPLTLVPLDVCNQV-----ILD 224
Query: 657 KLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGG 705
++ T + + Q L T +H + V F + L +++ G
Sbjct: 225 ATYSKQITATDPVATLVRQVLETKSGTHAEGYPVPIF--DPLATMLMAG 271
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 93 SAGPITVFVMGSHTNFA--IFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDS 150
S ITV +G TN A + L + P + I+ I M GA+ D + + D
Sbjct: 120 SQDKITVLSLGGFTNIANMLSLSSQPTDLQMIDQIVAMAGAVYVDGNVAALNDVQPAWDQ 179
Query: 151 IGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENF 201
G Y SN YAE+N+F DP AA V S +P+T++PLD + + +
Sbjct: 180 -GESY--RSNHYAEWNVFVDPVAANIVFGSSLPLTLVPLDVCNQVILDATY 227
>gi|319782254|ref|YP_004141730.1| inosine/uridine-preferring nucleoside hydrolase [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|317168142|gb|ADV11680.1| Inosine/uridine-preferring nucleoside hydrolase [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 314
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 63/141 (44%), Gaps = 27/141 (19%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP---ITVFVMGSHTNFAIFLM 113
YV+ GL A LP+ PL+ A L+ I P +TV +G TN A+ +
Sbjct: 82 YVHGETGLDGADLPE---PVTPLQSEHAVNYLVRTIMDAPEGALTVCTLGPMTNLAMAMT 138
Query: 114 NNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFA 173
P + + + +MGG F N++ P AEFNIF DP A
Sbjct: 139 MEPKIVPRLREVVLMGGGF----FQGGNAT-----------------PAAEFNIFVDPHA 177
Query: 174 AYTVLHSGIPVTIIPLDATKT 194
A+ V SG+PVT+ +D T T
Sbjct: 178 AHKVFDSGVPVTMAGIDCTYT 198
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 95/235 (40%), Gaps = 50/235 (21%)
Query: 407 KPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDD 466
+ ++ D D D A+++ L P EL + GI + T ++ + GR D
Sbjct: 4 RKIIIDTDPGQDDAFAILFALGSPAEL-EVVGITTVGGNVPLALTSKNALKVVELAGRPD 62
Query: 467 IPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGL-ARDLPRSPRRYTA 525
+PV GC L + ++ +T GL DLP +
Sbjct: 63 VPV-----------------YAGCPAPMVRKLITAEYVHGET--GLDGADLPEPVTPLQS 103
Query: 526 ENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS- 584
E++V + D PE +T+ T GP+TNLA + ++
Sbjct: 104 EHAVNYLVRTIMDAPE--------------------GALTVCTLGPMTNLAMAMTMEPKI 143
Query: 585 SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKL 639
+++V ++GG Q GN ++ AEFN+F+DP AA VF+S + + +
Sbjct: 144 VPRLREVVLMGGGFFQG---GN-----ATPAAEFNIFVDPHAAHKVFDSGVPVTM 190
>gi|301643933|ref|ZP_07243960.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 146-1]
gi|301077703|gb|EFK92509.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 146-1]
Length = 311
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPE--PTFAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAVKPLMREL----------------IIADNVHGESGLDGPALPEPT 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVELMA-------KTLRESAEP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHVEDTERFR 206
>gi|301025222|ref|ZP_07188791.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 69-1]
gi|419917173|ref|ZP_14435447.1| ribonucleoside hydrolase 1 [Escherichia coli KD2]
gi|432542001|ref|ZP_19778860.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE236]
gi|432547345|ref|ZP_19784140.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE237]
gi|432620729|ref|ZP_19856773.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE76]
gi|300396151|gb|EFJ79689.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 69-1]
gi|388394735|gb|EIL55992.1| ribonucleoside hydrolase 1 [Escherichia coli KD2]
gi|431077274|gb|ELD84535.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE236]
gi|431084858|gb|ELD90982.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE237]
gi|431162424|gb|ELE62873.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE76]
Length = 311
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPE--PTFAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 106/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAVKPLM----------------RELIIADNVHGESGLDGPALPEPT 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVELMA-------KTLRESAEP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHVEDTERFR 206
>gi|170767941|ref|ZP_02902394.1| inosine-uridine preferring nucleoside hydrolase [Escherichia
albertii TW07627]
gi|170123429|gb|EDS92360.1| inosine-uridine preferring nucleoside hydrolase [Escherichia
albertii TW07627]
Length = 311
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPEPA--FAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 108/264 (40%), Gaps = 67/264 (25%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPIILDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV A G V P L RDL
Sbjct: 59 TDIPV------AGGAVKP-----------------------------LMRDL------II 77
Query: 525 AENSVRFGASQDNDDPELRQP-------LAVDVW-KSIVESIEPGSKITILTNGPLTNLA 576
A+N D P L +P AV++ K++ ES EP +TI++ GP TN+A
Sbjct: 78 ADN---VHGESGLDGPALPEPAFAPQNCTAVELMAKTLRESAEP---VTIVSTGPQTNVA 131
Query: 577 QIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ S I + I+GG G N + AEFN+++DP AA+ VF+S +
Sbjct: 132 LLLNSHPELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGI 182
Query: 636 EIKLIPLHMQRRVASFFKILHKLR 659
+ + L + + + + + R
Sbjct: 183 PVVMAGLDVTHKAQIYVEDTERFR 206
>gi|432690552|ref|ZP_19925798.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE161]
gi|431231040|gb|ELF26810.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE161]
Length = 311
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPE--PTFAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 108/257 (42%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D+ D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDLGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAVKPLMREL----------------IIADNVHGESGLDGPALPEPT 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVELMA-------KTLRESAEP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHVEDTERFR 206
>gi|266620946|ref|ZP_06113881.1| inosine-uridine preferring nucleoside hydrolase [Clostridium
hathewayi DSM 13479]
gi|288867406|gb|EFC99704.1| inosine-uridine preferring nucleoside hydrolase [Clostridium
hathewayi DSM 13479]
Length = 323
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 77/191 (40%), Gaps = 44/191 (23%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
SAG IT+ +G TN A+ L P + I+ I +MGG R N T
Sbjct: 124 SAGDITLIPVGPLTNIAMALRIEPAIAAKIKRIVLMGGGCRE--VNIT------------ 169
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTY 212
P +EFN + DP AA V+ SG +TI+PLDAT VS E RR T
Sbjct: 170 --------PTSEFNFWIDPEAAKIVIDSGCDITIVPLDATHAAAVSIEDAKEL-RRMGT- 219
Query: 213 EAQYCFQSLKMIRDTWSG-----------SPPFHEAYCMWDSF-------MAGVALSIML 254
+ S +I WS + P H+A + + V + + +
Sbjct: 220 --KASVVSADIIERRWSAYKNWQPMDDINTVPVHDALAVCAVINPAVLKNVVSVHVDVDI 277
Query: 255 NSSSHNGENAC 265
N + +G+ C
Sbjct: 278 NGGASDGQCIC 288
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 67/131 (51%), Gaps = 11/131 (8%)
Query: 564 ITILTNGPLTNLAQIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFL 622
IT++ GPLTN+A + ++ + ++ I+ + ++GG + N P+S EFN ++
Sbjct: 128 ITLIPVGPLTNIAMALRIEPAIAAKIKRIVLMGGGCREVN------ITPTS---EFNFWI 178
Query: 623 DPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQ 682
DP AAK V +S +I ++PL A + +LR R T SV S +++ + +
Sbjct: 179 DPEAAKIVIDSGCDITIVPLDATHAAAVSIEDAKELR-RMGTKASVVSADIIERRWSAYK 237
Query: 683 SHHSYHHVDTF 693
+ ++T
Sbjct: 238 NWQPMDDINTV 248
>gi|297516738|ref|ZP_06935124.1| ribonucleoside hydrolase 1 [Escherichia coli OP50]
Length = 292
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 62 VHGESGLDGPALPE--PTFAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 118
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 119 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 156
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 157 IVFQSGIPVVMAGLDVT 173
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 13/109 (11%)
Query: 552 KSIVESIEPGSKITILTNGPLTNLAQIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTV 610
K++ ES EP +TI++ GP TN+A ++ S I + I+GG G N
Sbjct: 91 KTLRESAEP---VTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGLGN-------- 139
Query: 611 PSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLR 659
+ AEFN+++DP AA+ VF+S + + + L + + + + R
Sbjct: 140 -WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGLDVTHKAQIHVEDTERFR 187
>gi|302552828|ref|ZP_07305170.1| nucleoside hydrolase [Streptomyces viridochromogenes DSM 40736]
gi|302470446|gb|EFL33539.1| nucleoside hydrolase [Streptomyces viridochromogenes DSM 40736]
Length = 318
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 75/168 (44%), Gaps = 36/168 (21%)
Query: 51 PVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPT---AQQVLINAISAGP--ITVFVMGSH 105
PV +V+ G+ LP AP R P A +L I A P +T+
Sbjct: 78 PVRTARHVHGEDGMGDLGLP------APTRVPVDVDAVTLLRREILASPRPVTLIPTAPL 131
Query: 106 TNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEF 165
TN A+ L +P + +NIE I MGGA+ + GN + P AEF
Sbjct: 132 TNIALLLRTHPEVTRNIERIVFMGGAV-----------------ATGN-----ATPVAEF 169
Query: 166 NIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYE 213
N++ DP AA +L +G+P+T+ LD K + V E +R + + E
Sbjct: 170 NVWHDPEAAAVLLSAGVPITMYGLDVFKRVLVPAG---EVQRLRTSTE 214
>gi|440693912|ref|ZP_20876562.1| inosine-uridine preferring nucleoside hydrolase [Streptomyces
turgidiscabies Car8]
gi|440284159|gb|ELP71329.1| inosine-uridine preferring nucleoside hydrolase [Streptomyces
turgidiscabies Car8]
Length = 342
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 25/118 (21%)
Query: 96 PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY 155
P+T+ M TN A+ L +P + NIE I MGGA+ +GN
Sbjct: 143 PVTLIPMAPLTNIALLLRTHPEVTANIERIVFMGGAV-----------------EVGN-- 183
Query: 156 PDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYE 213
+ P AEFN++ DP AA +L +G+P+T+ LD + + V + + +R + + E
Sbjct: 184 ---ATPVAEFNVWHDPEAAAVLLTAGVPITMYGLDVFRRVVVP---WADVQRLRGSAE 235
>gi|411008602|ref|ZP_11384931.1| inosine-uridine preferring nucleoside hydrolase superfamily protein
[Aeromonas aquariorum AAK1]
Length = 322
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 72/122 (59%), Gaps = 17/122 (13%)
Query: 551 WKSIVESIE--PGSKITILTNGPLTNLAQIIGLQNS---SSVIQDVYIVGGNKGQDNEKG 605
W+ IVE+++ PG +IT++T GPLTNLA + LQ + + +++ V ++GG G ++ +G
Sbjct: 105 WQYIVEAVKAAPG-EITLVTIGPLTNLA--LALQAAPEIAGLVKQVVVMGGAFGVNDHRG 161
Query: 606 NVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFK--ILHKLRDRKK 663
NV + YAE N+ DP AA VF ++ + +I L + ++ SFF L LRD
Sbjct: 162 NV-----TPYAEANIHDDPDAADRVFTARWPVVIIGLDVTQQ--SFFSSAYLDALRDDAG 214
Query: 664 TP 665
P
Sbjct: 215 EP 216
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 57/121 (47%), Gaps = 25/121 (20%)
Query: 84 AQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTN 141
A Q ++ A+ A P IT+ +G TN A+ L P + ++ + VMGGA +
Sbjct: 104 AWQYIVEAVKAAPGEITLVTIGPLTNLALALQAAPEIAGLVKQVVVMGGAFGVN------ 157
Query: 142 SSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENF 201
D GN+ PYAE NI DP AA V + PV II LD T+ ++F
Sbjct: 158 -------DHRGNV-----TPYAEANIHDDPDAADRVFTARWPVVIIGLDVTQ-----QSF 200
Query: 202 F 202
F
Sbjct: 201 F 201
>gi|415776947|ref|ZP_11488199.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli 3431]
gi|315616427|gb|EFU97044.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli 3431]
Length = 311
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPE--PTFAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAVKPLMREL----------------IIADNVHGESGLDGPALPEPT 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVELMA-------KTLRESAEP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHVEDTERFR 206
>gi|62179259|ref|YP_215676.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|375113579|ref|ZP_09758749.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|75484428|sp|Q57RR6.1|RIHA_SALCH RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|62126892|gb|AAX64595.1| putative purine nucleoside hydrolase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|322713725|gb|EFZ05296.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
Length = 311
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 59/128 (46%), Gaps = 33/128 (25%)
Query: 67 AFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEH 124
+F PQ G TA +++ + SA P+T+ G TN A+ L ++P L I
Sbjct: 96 SFAPQSG---------TAVELMAKTLRESAQPVTIVSTGPQTNVALLLNSHPELHTKIAR 146
Query: 125 IYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPV 184
I +MGGA+ +GN P AEFNI+ DP AA V SGIPV
Sbjct: 147 IVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAEIVFQSGIPV 184
Query: 185 TIIPLDAT 192
+ LD T
Sbjct: 185 VMAGLDVT 192
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 112/271 (41%), Gaps = 53/271 (19%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + +K I S+ T+ V +L ++ R
Sbjct: 1 MALPIIIDCDPGHDDAIALVLALASPE--LEVKAITSSAGNQTPEKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 PDIPV------AGGAVKPLM----------------RELIIADNVHGESGLDGPALP--- 93
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
E S A Q EL K++ ES +P +TI++ GP TN+A ++
Sbjct: 94 --EPSF---APQSGTAVELMA-------KTLRESAQP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+ I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHTKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLRDRKKTPESVFSQRL 673
+ + + + RD ++ ++ L
Sbjct: 190 DVTHKAQIHAADIERFRDIGNPISTIVAELL 220
>gi|416509226|ref|ZP_11736466.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB31]
gi|416522454|ref|ZP_11740550.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. ATCC BAA710]
gi|416563209|ref|ZP_11762735.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 42N]
gi|363551417|gb|EHL35735.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB31]
gi|363551973|gb|EHL36281.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. ATCC BAA710]
gi|363572097|gb|EHL55992.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 42N]
Length = 311
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 60/128 (46%), Gaps = 33/128 (25%)
Query: 67 AFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEH 124
+F PQ G TA +++ + S+ P+T+ G TN A+ L ++P L I
Sbjct: 96 SFAPQSG---------TAVELMAKTLRESSQPVTIVSTGPQTNVALLLNSHPELHTKIAR 146
Query: 125 IYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPV 184
I +MGGA+ ++GN P AEFNI+ DP AA V SGIPV
Sbjct: 147 IVIMGGAM-----------------TLGNW-----TPAAEFNIYVDPEAAEIVFQSGIPV 184
Query: 185 TIIPLDAT 192
+ LD T
Sbjct: 185 VMTGLDVT 192
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 105/257 (40%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + +K I S+ T+ V +L ++ R
Sbjct: 1 MALPIIIDCDPGHDDAIALVLALASPE--LEVKAITSSAGNQTPEKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 PDIPV------AGGAVKPLM----------------RELIIADNVHGESGLDGPALP--- 93
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
E S A Q EL K++ ES +P +TI++ GP TN+A ++
Sbjct: 94 --EPSF---APQSGTAVELMA-------KTLRESSQP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+ I + I+GG N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHTKIARIVIMGGAMTLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMTGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHAADIERFR 206
>gi|218699016|ref|YP_002406645.1| ribonucleoside hydrolase 1 [Escherichia coli IAI39]
gi|386623037|ref|YP_006142765.1| ribonucleoside hydrolase 1 [Escherichia coli O7:K1 str. CE10]
gi|226739273|sp|B7NM03.1|RIHA_ECO7I RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|218369002|emb|CAR16756.1| ribonucleoside hydrolase 1 [Escherichia coli IAI39]
gi|349736775|gb|AEQ11481.1| ribonucleoside hydrolase 1 [Escherichia coli O7:K1 str. CE10]
Length = 311
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPE--PTFAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 107/264 (40%), Gaps = 67/264 (25%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV A G V P L RDL
Sbjct: 59 TDIPV------ASGAVKP-----------------------------LMRDL------II 77
Query: 525 AENSVRFGASQDNDDPELRQPL-------AVDVW-KSIVESIEPGSKITILTNGPLTNLA 576
A+N D P L +P AV++ K++ ES EP +TI++ GP TN+A
Sbjct: 78 ADN---VHGESGLDGPALPEPTFAPQNCTAVELMAKTLRESAEP---VTIVSTGPQTNVA 131
Query: 577 QIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ S I + I+GG G N + AEFN+++DP AA+ VF+S +
Sbjct: 132 LLLNSHPELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGI 182
Query: 636 EIKLIPLHMQRRVASFFKILHKLR 659
+ + L + + + + R
Sbjct: 183 PVVMAGLDVTHKAQIHVEDTERFR 206
>gi|417275215|ref|ZP_12062552.1| putative cytidine/uridine-specific hydrolase [Escherichia coli
3.2303]
gi|417826704|ref|ZP_12473280.1| ribonucleoside hydrolase 1 [Shigella flexneri J1713]
gi|425271334|ref|ZP_18662841.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
TW15901]
gi|425282011|ref|ZP_18673126.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
TW00353]
gi|335576904|gb|EGM63142.1| ribonucleoside hydrolase 1 [Shigella flexneri J1713]
gi|386241868|gb|EII78781.1| putative cytidine/uridine-specific hydrolase [Escherichia coli
3.2303]
gi|408198397|gb|EKI23627.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
TW15901]
gi|408205779|gb|EKI30614.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
TW00353]
Length = 246
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPE--PTFAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 106/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAVKPLM----------------RELIIADNVHGESGLDGPALPEPT 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVELMA-------KTLRESAEP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHVEDTERFR 206
>gi|82543094|ref|YP_407041.1| ribonucleoside hydrolase 1 [Shigella boydii Sb227]
gi|416298351|ref|ZP_11651939.1| Inosine-uridine preferring nucleoside hydrolase [Shigella flexneri
CDC 796-83]
gi|417680813|ref|ZP_12330196.1| inosine-uridine preferring nucleoside hydrolase family protein
[Shigella boydii 3594-74]
gi|420324308|ref|ZP_14826092.1| pyrimidine-specific ribonucleoside hydrolase rihA [Shigella
flexneri CCH060]
gi|420351456|ref|ZP_14852649.1| pyrimidine-specific ribonucleoside hydrolase rihA [Shigella boydii
4444-74]
gi|421681284|ref|ZP_16121112.1| ribonucleoside hydrolase 1 [Shigella flexneri 1485-80]
gi|123755642|sp|Q324P5.1|RIHA_SHIBS RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|81244505|gb|ABB65213.1| putative tRNA synthetase [Shigella boydii Sb227]
gi|320185370|gb|EFW60140.1| Inosine-uridine preferring nucleoside hydrolase [Shigella flexneri
CDC 796-83]
gi|332097768|gb|EGJ02742.1| inosine-uridine preferring nucleoside hydrolase family protein
[Shigella boydii 3594-74]
gi|391256457|gb|EIQ15588.1| pyrimidine-specific ribonucleoside hydrolase rihA [Shigella
flexneri CCH060]
gi|391287961|gb|EIQ46471.1| pyrimidine-specific ribonucleoside hydrolase rihA [Shigella boydii
4444-74]
gi|404341697|gb|EJZ68101.1| ribonucleoside hydrolase 1 [Shigella flexneri 1485-80]
Length = 311
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPE--PTFAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 106/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAVKPLM----------------RELIIADNVHGESGLDGPALPEPT 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVELMA-------KTLRESAEP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHIEDTERFR 206
>gi|30062161|ref|NP_836332.1| ribonucleoside hydrolase 1 [Shigella flexneri 2a str. 2457T]
gi|56479705|ref|NP_706560.2| ribonucleoside hydrolase 1 [Shigella flexneri 2a str. 301]
gi|110804700|ref|YP_688220.1| ribonucleoside hydrolase 1 [Shigella flexneri 5 str. 8401]
gi|384542229|ref|YP_005726291.1| Pyrimidine-specific ribonucleoside hydrolase rihA [Shigella
flexneri 2002017]
gi|415855653|ref|ZP_11530942.1| inosine-uridine preferring nucleoside hydrolase family protein
[Shigella flexneri 2a str. 2457T]
gi|417700428|ref|ZP_12349568.1| inosine-uridine preferring nucleoside hydrolase family protein
[Shigella flexneri K-218]
gi|417711198|ref|ZP_12360204.1| inosine-uridine preferring nucleoside hydrolase family protein
[Shigella flexneri K-272]
gi|417716154|ref|ZP_12365087.1| inosine-uridine preferring nucleoside hydrolase family protein
[Shigella flexneri K-227]
gi|417721548|ref|ZP_12370393.1| inosine-uridine preferring nucleoside hydrolase family protein
[Shigella flexneri K-304]
gi|417737507|ref|ZP_12386113.1| inosine-uridine preferring nucleoside hydrolase family protein
[Shigella flexneri 4343-70]
gi|417742166|ref|ZP_12390717.1| ribonucleoside hydrolase 1 [Shigella flexneri 2930-71]
gi|418254044|ref|ZP_12878946.1| ribonucleoside hydrolase 1 [Shigella flexneri 6603-63]
gi|420340313|ref|ZP_14841838.1| pyrimidine-specific ribonucleoside hydrolase rihA [Shigella
flexneri K-404]
gi|420370651|ref|ZP_14871181.1| pyrimidine-specific ribonucleoside hydrolase rihA [Shigella
flexneri 1235-66]
gi|424837167|ref|ZP_18261804.1| ribonucleoside hydrolase 1 [Shigella flexneri 5a str. M90T]
gi|81723657|sp|Q83LY1.4|RIHA_SHIFL RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|123147159|sp|Q0T6R1.1|RIHA_SHIF8 RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|30040406|gb|AAP16138.1| putative tRNA synthetase [Shigella flexneri 2a str. 2457T]
gi|56383256|gb|AAN42267.2| putative tRNA synthetase [Shigella flexneri 2a str. 301]
gi|110614248|gb|ABF02915.1| putative tRNA synthetase [Shigella flexneri 5 str. 8401]
gi|281600014|gb|ADA72998.1| Pyrimidine-specific ribonucleoside hydrolase rihA [Shigella
flexneri 2002017]
gi|313649703|gb|EFS14127.1| inosine-uridine preferring nucleoside hydrolase family protein
[Shigella flexneri 2a str. 2457T]
gi|332760977|gb|EGJ91265.1| inosine-uridine preferring nucleoside hydrolase family protein
[Shigella flexneri 4343-70]
gi|332768246|gb|EGJ98431.1| ribonucleoside hydrolase 1 [Shigella flexneri 2930-71]
gi|333007805|gb|EGK27281.1| inosine-uridine preferring nucleoside hydrolase family protein
[Shigella flexneri K-218]
gi|333010067|gb|EGK29502.1| inosine-uridine preferring nucleoside hydrolase family protein
[Shigella flexneri K-272]
gi|333020898|gb|EGK40158.1| inosine-uridine preferring nucleoside hydrolase family protein
[Shigella flexneri K-227]
gi|333021423|gb|EGK40673.1| inosine-uridine preferring nucleoside hydrolase family protein
[Shigella flexneri K-304]
gi|383466219|gb|EID61240.1| ribonucleoside hydrolase 1 [Shigella flexneri 5a str. M90T]
gi|391273502|gb|EIQ32327.1| pyrimidine-specific ribonucleoside hydrolase rihA [Shigella
flexneri K-404]
gi|391320044|gb|EIQ76962.1| pyrimidine-specific ribonucleoside hydrolase rihA [Shigella
flexneri 1235-66]
gi|397900797|gb|EJL17153.1| ribonucleoside hydrolase 1 [Shigella flexneri 6603-63]
Length = 311
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPE--PTFAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 106/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAVKPLM----------------RELIIADNVHGESGLDGPALPEPT 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVELMA-------KTLRESAEP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHVEDTERFR 206
>gi|187733117|ref|YP_001879340.1| ribonucleoside hydrolase 1 [Shigella boydii CDC 3083-94]
gi|420378865|ref|ZP_14878360.1| pyrimidine-specific ribonucleoside hydrolase rihA [Shigella
dysenteriae 225-75]
gi|226739289|sp|B2TU69.1|RIHA_SHIB3 RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|187430109|gb|ACD09383.1| inosine-uridine preferring nucleoside hydrolase [Shigella boydii
CDC 3083-94]
gi|391306231|gb|EIQ63991.1| pyrimidine-specific ribonucleoside hydrolase rihA [Shigella
dysenteriae 225-75]
Length = 311
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPE--PTFAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAVKPLMREL----------------IIADNVHGESGLDGPALPEPT 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVELMA-------KTLRESAEP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHIEDTERFR 206
>gi|15800365|ref|NP_286377.1| ribonucleoside hydrolase 1 [Escherichia coli O157:H7 str. EDL933]
gi|15829944|ref|NP_308717.1| ribonucleoside hydrolase 1 [Escherichia coli O157:H7 str. Sakai]
gi|168752221|ref|ZP_02777243.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
O157:H7 str. EC4113]
gi|168758294|ref|ZP_02783301.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
O157:H7 str. EC4401]
gi|168764672|ref|ZP_02789679.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
O157:H7 str. EC4501]
gi|168767098|ref|ZP_02792105.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
O157:H7 str. EC4486]
gi|168777608|ref|ZP_02802615.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
O157:H7 str. EC4196]
gi|168779142|ref|ZP_02804149.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
O157:H7 str. EC4076]
gi|168786501|ref|ZP_02811508.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
O157:H7 str. EC869]
gi|168802439|ref|ZP_02827446.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
O157:H7 str. EC508]
gi|194434444|ref|ZP_03066705.1| inosine-uridine preferring nucleoside hydrolase [Shigella
dysenteriae 1012]
gi|195939389|ref|ZP_03084771.1| ribonucleoside hydrolase 1 [Escherichia coli O157:H7 str. EC4024]
gi|208805759|ref|ZP_03248096.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
O157:H7 str. EC4206]
gi|208815054|ref|ZP_03256233.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
O157:H7 str. EC4045]
gi|208822967|ref|ZP_03263285.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
O157:H7 str. EC4042]
gi|209396421|ref|YP_002269286.1| ribonucleoside hydrolase 1 [Escherichia coli O157:H7 str. EC4115]
gi|217324722|ref|ZP_03440806.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
O157:H7 str. TW14588]
gi|254791815|ref|YP_003076652.1| ribonucleoside hydrolase 1 [Escherichia coli O157:H7 str. TW14359]
gi|261224120|ref|ZP_05938401.1| ribonucleoside hydrolase 1 [Escherichia coli O157:H7 str. FRIK2000]
gi|261257814|ref|ZP_05950347.1| ribonucleoside hydrolase 1 [Escherichia coli O157:H7 str. FRIK966]
gi|291281601|ref|YP_003498419.1| Pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O55:H7 str. CB9615]
gi|387505712|ref|YP_006157968.1| ribonucleoside hydrolase 1 [Escherichia coli O55:H7 str. RM12579]
gi|387606151|ref|YP_006095007.1| pyrimidine-specific ribonucleoside hydrolase
(cytidine/uridine-specific hydrolase) [Escherichia coli
042]
gi|387881229|ref|YP_006311531.1| ribonucleoside hydrolase 1 [Escherichia coli Xuzhou21]
gi|416287197|ref|ZP_11648801.1| Inosine-uridine preferring nucleoside hydrolase [Shigella boydii
ATCC 9905]
gi|416313192|ref|ZP_11658127.1| Inosine-uridine preferring nucleoside hydrolase [Escherichia coli
O157:H7 str. 1044]
gi|416317012|ref|ZP_11660144.1| Inosine-uridine preferring nucleoside hydrolase [Escherichia coli
O157:H7 str. EC1212]
gi|416325419|ref|ZP_11665827.1| Inosine-uridine preferring nucleoside hydrolase [Escherichia coli
O157:H7 str. 1125]
gi|416781366|ref|ZP_11877196.1| ribonucleoside hydrolase 1 [Escherichia coli O157:H7 str. G5101]
gi|416792463|ref|ZP_11882092.1| ribonucleoside hydrolase 1 [Escherichia coli O157:H- str. 493-89]
gi|416803922|ref|ZP_11886963.1| ribonucleoside hydrolase 1 [Escherichia coli O157:H- str. H 2687]
gi|416814837|ref|ZP_11891659.1| ribonucleoside hydrolase 1 [Escherichia coli O55:H7 str. 3256-97]
gi|416824876|ref|ZP_11896245.1| ribonucleoside hydrolase 1 [Escherichia coli O55:H7 str. USDA 5905]
gi|416835769|ref|ZP_11901525.1| ribonucleoside hydrolase 1 [Escherichia coli O157:H7 str. LSU-61]
gi|417671296|ref|ZP_12320789.1| inosine-uridine preferring nucleoside hydrolase family protein
[Shigella dysenteriae 155-74]
gi|417688418|ref|ZP_12337662.1| inosine-uridine preferring nucleoside hydrolase family protein
[Shigella boydii 5216-82]
gi|419043710|ref|ZP_13590683.1| ribonucleoside hydrolase 1 [Escherichia coli DEC3A]
gi|419049260|ref|ZP_13596177.1| ribonucleoside hydrolase 1 [Escherichia coli DEC3B]
gi|419055316|ref|ZP_13602172.1| ribonucleoside hydrolase 1 [Escherichia coli DEC3C]
gi|419060910|ref|ZP_13607693.1| ribonucleoside hydrolase 1 [Escherichia coli DEC3D]
gi|419066815|ref|ZP_13613469.1| ribonucleoside hydrolase 1 [Escherichia coli DEC3E]
gi|419073730|ref|ZP_13619302.1| ribonucleoside hydrolase 1 [Escherichia coli DEC3F]
gi|419079006|ref|ZP_13624489.1| ribonucleoside hydrolase 1 [Escherichia coli DEC4A]
gi|419084628|ref|ZP_13630042.1| ribonucleoside hydrolase 1 [Escherichia coli DEC4B]
gi|419090676|ref|ZP_13635995.1| ribonucleoside hydrolase 1 [Escherichia coli DEC4C]
gi|419096372|ref|ZP_13641616.1| ribonucleoside hydrolase 1 [Escherichia coli DEC4D]
gi|419102392|ref|ZP_13647558.1| ribonucleoside hydrolase 1 [Escherichia coli DEC4E]
gi|419107745|ref|ZP_13652855.1| ribonucleoside hydrolase 1 [Escherichia coli DEC4F]
gi|419113563|ref|ZP_13658597.1| ribonucleoside hydrolase 1 [Escherichia coli DEC5A]
gi|419119152|ref|ZP_13664133.1| ribonucleoside hydrolase 1 [Escherichia coli DEC5B]
gi|419124789|ref|ZP_13669690.1| ribonucleoside hydrolase 1 [Escherichia coli DEC5C]
gi|419130393|ref|ZP_13675244.1| ribonucleoside hydrolase 1 [Escherichia coli DEC5D]
gi|419135130|ref|ZP_13679937.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
DEC5E]
gi|420267989|ref|ZP_14770396.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA22]
gi|420273713|ref|ZP_14776046.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA40]
gi|420278493|ref|ZP_14780760.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
TW06591]
gi|420286255|ref|ZP_14788458.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
TW10246]
gi|420290790|ref|ZP_14792955.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
TW11039]
gi|420296449|ref|ZP_14798545.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
TW09109]
gi|420302525|ref|ZP_14804555.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
TW10119]
gi|420312733|ref|ZP_14814650.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC1738]
gi|420314960|ref|ZP_14816848.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC1734]
gi|420345846|ref|ZP_14847275.1| pyrimidine-specific ribonucleoside hydrolase rihA [Shigella boydii
965-58]
gi|421810890|ref|ZP_16246694.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
8.0416]
gi|421816969|ref|ZP_16252528.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
10.0821]
gi|421822360|ref|ZP_16257797.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
FRIK920]
gi|421829090|ref|ZP_16264419.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA7]
gi|422330922|ref|ZP_16411939.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
4_1_47FAA]
gi|423658923|ref|ZP_17634190.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA31]
gi|424075523|ref|ZP_17812881.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
FDA505]
gi|424081857|ref|ZP_17818726.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
FDA517]
gi|424088477|ref|ZP_17824744.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
FRIK1996]
gi|424094699|ref|ZP_17830463.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
FRIK1985]
gi|424101097|ref|ZP_17836270.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
FRIK1990]
gi|424107910|ref|ZP_17842499.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
93-001]
gi|424113899|ref|ZP_17848061.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA3]
gi|424119956|ref|ZP_17853679.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA5]
gi|424126214|ref|ZP_17859426.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA9]
gi|424132308|ref|ZP_17865120.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA10]
gi|424138849|ref|ZP_17871155.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA14]
gi|424145289|ref|ZP_17877071.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA15]
gi|424151432|ref|ZP_17882697.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA24]
gi|424185172|ref|ZP_17888134.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA25]
gi|424268148|ref|ZP_17894036.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA28]
gi|424423073|ref|ZP_17899765.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA32]
gi|424453836|ref|ZP_17905385.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA33]
gi|424460139|ref|ZP_17911084.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA39]
gi|424473173|ref|ZP_17922860.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA42]
gi|424479121|ref|ZP_17928377.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
TW07945]
gi|424485182|ref|ZP_17934061.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
TW09098]
gi|424491336|ref|ZP_17939720.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
TW09195]
gi|424498400|ref|ZP_17945686.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC4203]
gi|424504628|ref|ZP_17951418.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC4196]
gi|424510890|ref|ZP_17957130.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
TW14313]
gi|424518457|ref|ZP_17962894.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
TW14301]
gi|424524284|ref|ZP_17968319.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC4421]
gi|424530488|ref|ZP_17974128.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC4422]
gi|424536460|ref|ZP_17979736.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC4013]
gi|424542374|ref|ZP_17985204.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC4402]
gi|424548697|ref|ZP_17990914.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC4439]
gi|424554962|ref|ZP_17996691.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC4436]
gi|424561307|ref|ZP_18002605.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC4437]
gi|424567338|ref|ZP_18008264.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC4448]
gi|424573521|ref|ZP_18013956.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC1845]
gi|424579474|ref|ZP_18019418.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC1863]
gi|425096151|ref|ZP_18499185.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
3.4870]
gi|425102296|ref|ZP_18504952.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
5.2239]
gi|425108087|ref|ZP_18510348.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
6.0172]
gi|425123916|ref|ZP_18525505.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
8.0586]
gi|425129954|ref|ZP_18531064.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
8.2524]
gi|425136295|ref|ZP_18537029.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
10.0833]
gi|425142195|ref|ZP_18542493.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
10.0869]
gi|425148507|ref|ZP_18548413.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
88.0221]
gi|425154126|ref|ZP_18553684.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA34]
gi|425160576|ref|ZP_18559760.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
FDA506]
gi|425166090|ref|ZP_18564909.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
FDA507]
gi|425172378|ref|ZP_18570786.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
FDA504]
gi|425178262|ref|ZP_18576326.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
FRIK1999]
gi|425184411|ref|ZP_18582045.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
FRIK1997]
gi|425191163|ref|ZP_18588301.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
NE1487]
gi|425197491|ref|ZP_18594149.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
NE037]
gi|425204149|ref|ZP_18600287.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
FRIK2001]
gi|425209904|ref|ZP_18605649.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA4]
gi|425215948|ref|ZP_18611276.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA23]
gi|425222522|ref|ZP_18617390.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA49]
gi|425228764|ref|ZP_18623169.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA45]
gi|425235064|ref|ZP_18629034.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
TT12B]
gi|425241062|ref|ZP_18634706.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
MA6]
gi|425247181|ref|ZP_18640400.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
5905]
gi|425252917|ref|ZP_18645803.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
CB7326]
gi|425259230|ref|ZP_18651603.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC96038]
gi|425265334|ref|ZP_18657264.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
5412]
gi|425292789|ref|ZP_18683378.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA38]
gi|425309521|ref|ZP_18698994.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC1735]
gi|425315444|ref|ZP_18704527.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC1736]
gi|425321504|ref|ZP_18710182.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC1737]
gi|425327696|ref|ZP_18715924.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC1846]
gi|425333880|ref|ZP_18721607.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC1847]
gi|425340293|ref|ZP_18727542.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC1848]
gi|425346171|ref|ZP_18732979.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC1849]
gi|425352390|ref|ZP_18738777.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC1850]
gi|425358387|ref|ZP_18744366.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC1856]
gi|425364487|ref|ZP_18750044.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC1862]
gi|425370940|ref|ZP_18755909.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC1864]
gi|425383731|ref|ZP_18767616.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC1866]
gi|425390423|ref|ZP_18773888.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC1868]
gi|425396544|ref|ZP_18779596.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC1869]
gi|425402537|ref|ZP_18785146.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC1870]
gi|425409069|ref|ZP_18791231.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
NE098]
gi|425415353|ref|ZP_18796997.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
FRIK523]
gi|425426492|ref|ZP_18807548.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
0.1304]
gi|428945168|ref|ZP_19017811.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
88.1467]
gi|428951317|ref|ZP_19023446.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
88.1042]
gi|428957174|ref|ZP_19028865.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
89.0511]
gi|428963488|ref|ZP_19034678.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
90.0091]
gi|428969595|ref|ZP_19040229.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
90.0039]
gi|428976038|ref|ZP_19046213.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
90.2281]
gi|428981771|ref|ZP_19051506.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
93.0055]
gi|428988101|ref|ZP_19057395.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
93.0056]
gi|428993918|ref|ZP_19062827.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
94.0618]
gi|429000024|ref|ZP_19068533.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
95.0183]
gi|429006272|ref|ZP_19074182.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
95.1288]
gi|429012599|ref|ZP_19079854.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
95.0943]
gi|429018774|ref|ZP_19085557.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
96.0428]
gi|429024495|ref|ZP_19090907.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
96.0427]
gi|429030812|ref|ZP_19096690.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
96.0939]
gi|429036995|ref|ZP_19102436.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
96.0932]
gi|429042909|ref|ZP_19107914.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
96.0107]
gi|429048706|ref|ZP_19113363.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
97.0003]
gi|429054077|ref|ZP_19118566.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
97.1742]
gi|429059750|ref|ZP_19123894.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
97.0007]
gi|429065224|ref|ZP_19129085.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
99.0672]
gi|429071782|ref|ZP_19135135.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
99.0678]
gi|429077099|ref|ZP_19140314.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
99.0713]
gi|429824292|ref|ZP_19355789.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
96.0109]
gi|429830645|ref|ZP_19361499.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
97.0010]
gi|432453419|ref|ZP_19695657.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE193]
gi|432601193|ref|ZP_19837446.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE66]
gi|432717696|ref|ZP_19952696.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE9]
gi|432769507|ref|ZP_20003862.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE50]
gi|432791875|ref|ZP_20025968.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE78]
gi|432797840|ref|ZP_20031867.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE79]
gi|432859387|ref|ZP_20085458.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE146]
gi|432960150|ref|ZP_20150356.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE202]
gi|433032143|ref|ZP_20219931.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE112]
gi|433061902|ref|ZP_20248861.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE125]
gi|444922975|ref|ZP_21242686.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
09BKT078844]
gi|444929297|ref|ZP_21248446.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
99.0814]
gi|444934648|ref|ZP_21253586.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
99.0815]
gi|444940226|ref|ZP_21258870.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
99.0816]
gi|444945830|ref|ZP_21264247.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
99.0839]
gi|444951372|ref|ZP_21269594.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
99.0848]
gi|444956825|ref|ZP_21274821.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
99.1753]
gi|444962083|ref|ZP_21279832.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
99.1775]
gi|444967858|ref|ZP_21285331.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
99.1793]
gi|444973361|ref|ZP_21290639.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
99.1805]
gi|444978908|ref|ZP_21295899.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
ATCC 700728]
gi|444984197|ref|ZP_21301063.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA11]
gi|444989438|ref|ZP_21306176.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA19]
gi|444994792|ref|ZP_21311385.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA13]
gi|445000295|ref|ZP_21316754.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA2]
gi|445005754|ref|ZP_21322090.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA47]
gi|445010919|ref|ZP_21327108.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA48]
gi|445016697|ref|ZP_21332743.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA8]
gi|445022148|ref|ZP_21338067.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
7.1982]
gi|445027390|ref|ZP_21343165.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
99.1781]
gi|445032888|ref|ZP_21348509.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
99.1762]
gi|445038582|ref|ZP_21354049.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA35]
gi|445043793|ref|ZP_21359129.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
3.4880]
gi|445049356|ref|ZP_21364522.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
95.0083]
gi|445055019|ref|ZP_21369967.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
99.0670]
gi|452969780|ref|ZP_21968007.1| ribonucleoside hydrolase [Escherichia coli O157:H7 str. EC4009]
gi|81765695|sp|Q8XBL8.1|RIHA_ECO57 RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|226739272|sp|B5YQK2.1|RIHA_ECO5E RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|12513558|gb|AAG54985.1|AE005244_3 putative tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
gi|13360148|dbj|BAB34113.1| putative tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
gi|187767178|gb|EDU31022.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
O157:H7 str. EC4196]
gi|188013882|gb|EDU52004.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
O157:H7 str. EC4113]
gi|189003131|gb|EDU72117.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
O157:H7 str. EC4076]
gi|189354849|gb|EDU73268.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
O157:H7 str. EC4401]
gi|189363460|gb|EDU81879.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
O157:H7 str. EC4486]
gi|189365377|gb|EDU83793.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
O157:H7 str. EC4501]
gi|189373662|gb|EDU92078.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
O157:H7 str. EC869]
gi|189375581|gb|EDU93997.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
O157:H7 str. EC508]
gi|194417295|gb|EDX33403.1| inosine-uridine preferring nucleoside hydrolase [Shigella
dysenteriae 1012]
gi|208725560|gb|EDZ75161.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
O157:H7 str. EC4206]
gi|208731702|gb|EDZ80390.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
O157:H7 str. EC4045]
gi|208737160|gb|EDZ84844.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
O157:H7 str. EC4042]
gi|209157821|gb|ACI35254.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
O157:H7 str. EC4115]
gi|209776948|gb|ACI86786.1| putative tRNA synthetase [Escherichia coli]
gi|209776950|gb|ACI86787.1| putative tRNA synthetase [Escherichia coli]
gi|209776952|gb|ACI86788.1| putative tRNA synthetase [Escherichia coli]
gi|209776954|gb|ACI86789.1| putative tRNA synthetase [Escherichia coli]
gi|209776956|gb|ACI86790.1| putative tRNA synthetase [Escherichia coli]
gi|217320943|gb|EEC29367.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
O157:H7 str. TW14588]
gi|254591215|gb|ACT70576.1| ribonucleoside hydrolase 1 [Escherichia coli O157:H7 str. TW14359]
gi|284920451|emb|CBG33512.1| pyrimidine-specific ribonucleoside hydrolase
(cytidine/uridine-specific hydrolase) [Escherichia coli
042]
gi|290761474|gb|ADD55435.1| Pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
O55:H7 str. CB9615]
gi|320178441|gb|EFW53409.1| Inosine-uridine preferring nucleoside hydrolase [Shigella boydii
ATCC 9905]
gi|320193057|gb|EFW67697.1| Inosine-uridine preferring nucleoside hydrolase [Escherichia coli
O157:H7 str. EC1212]
gi|320638102|gb|EFX07866.1| ribonucleoside hydrolase 1 [Escherichia coli O157:H7 str. G5101]
gi|320643506|gb|EFX12676.1| ribonucleoside hydrolase 1 [Escherichia coli O157:H- str. 493-89]
gi|320648841|gb|EFX17468.1| ribonucleoside hydrolase 1 [Escherichia coli O157:H- str. H 2687]
gi|320654425|gb|EFX22472.1| ribonucleoside hydrolase 1 [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320660107|gb|EFX27637.1| ribonucleoside hydrolase 1 [Escherichia coli O55:H7 str. USDA 5905]
gi|320664905|gb|EFX32040.1| ribonucleoside hydrolase 1 [Escherichia coli O157:H7 str. LSU-61]
gi|326341401|gb|EGD65193.1| Inosine-uridine preferring nucleoside hydrolase [Escherichia coli
O157:H7 str. 1044]
gi|326345819|gb|EGD69558.1| Inosine-uridine preferring nucleoside hydrolase [Escherichia coli
O157:H7 str. 1125]
gi|332094323|gb|EGI99374.1| inosine-uridine preferring nucleoside hydrolase family protein
[Shigella boydii 5216-82]
gi|332096783|gb|EGJ01773.1| inosine-uridine preferring nucleoside hydrolase family protein
[Shigella dysenteriae 155-74]
gi|373248171|gb|EHP67603.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
4_1_47FAA]
gi|374357706|gb|AEZ39413.1| ribonucleoside hydrolase 1 [Escherichia coli O55:H7 str. RM12579]
gi|377899992|gb|EHU64330.1| ribonucleoside hydrolase 1 [Escherichia coli DEC3A]
gi|377902084|gb|EHU66393.1| ribonucleoside hydrolase 1 [Escherichia coli DEC3B]
gi|377913814|gb|EHU77946.1| ribonucleoside hydrolase 1 [Escherichia coli DEC3C]
gi|377918041|gb|EHU82095.1| ribonucleoside hydrolase 1 [Escherichia coli DEC3D]
gi|377920466|gb|EHU84487.1| ribonucleoside hydrolase 1 [Escherichia coli DEC3E]
gi|377931700|gb|EHU95559.1| ribonucleoside hydrolase 1 [Escherichia coli DEC3F]
gi|377934093|gb|EHU97933.1| ribonucleoside hydrolase 1 [Escherichia coli DEC4A]
gi|377939337|gb|EHV03093.1| ribonucleoside hydrolase 1 [Escherichia coli DEC4B]
gi|377949629|gb|EHV13261.1| ribonucleoside hydrolase 1 [Escherichia coli DEC4C]
gi|377951272|gb|EHV14891.1| ribonucleoside hydrolase 1 [Escherichia coli DEC4D]
gi|377954213|gb|EHV17773.1| ribonucleoside hydrolase 1 [Escherichia coli DEC4E]
gi|377965531|gb|EHV28950.1| ribonucleoside hydrolase 1 [Escherichia coli DEC5A]
gi|377967616|gb|EHV31022.1| ribonucleoside hydrolase 1 [Escherichia coli DEC4F]
gi|377972556|gb|EHV35905.1| ribonucleoside hydrolase 1 [Escherichia coli DEC5B]
gi|377980317|gb|EHV43582.1| ribonucleoside hydrolase 1 [Escherichia coli DEC5C]
gi|377980553|gb|EHV43817.1| ribonucleoside hydrolase 1 [Escherichia coli DEC5D]
gi|377987440|gb|EHV50626.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
DEC5E]
gi|386794687|gb|AFJ27721.1| ribonucleoside hydrolase 1 [Escherichia coli Xuzhou21]
gi|390650624|gb|EIN29024.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
FRIK1996]
gi|390652642|gb|EIN30844.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
FDA517]
gi|390653106|gb|EIN31272.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
FDA505]
gi|390669639|gb|EIN46259.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
93-001]
gi|390672722|gb|EIN48999.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
FRIK1990]
gi|390673472|gb|EIN49714.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
FRIK1985]
gi|390688527|gb|EIN63585.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA3]
gi|390691935|gb|EIN66657.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA9]
gi|390692844|gb|EIN67505.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA5]
gi|390708255|gb|EIN81519.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA10]
gi|390710029|gb|EIN83068.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA15]
gi|390711873|gb|EIN84832.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA14]
gi|390720469|gb|EIN93181.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA22]
gi|390733227|gb|EIO04811.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA25]
gi|390733409|gb|EIO04989.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA24]
gi|390736515|gb|EIO07849.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA28]
gi|390751820|gb|EIO21693.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA31]
gi|390752213|gb|EIO22062.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA32]
gi|390754700|gb|EIO24267.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA33]
gi|390762631|gb|EIO31889.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA40]
gi|390777735|gb|EIO45513.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA42]
gi|390783282|gb|EIO50891.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA39]
gi|390785467|gb|EIO53009.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
TW06591]
gi|390791901|gb|EIO59264.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
TW10246]
gi|390802021|gb|EIO69072.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
TW11039]
gi|390809459|gb|EIO76253.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
TW07945]
gi|390811598|gb|EIO78298.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
TW09109]
gi|390819195|gb|EIO85544.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
TW10119]
gi|390822754|gb|EIO88850.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
TW09098]
gi|390836972|gb|EIP01437.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC4203]
gi|390839845|gb|EIP03924.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC4196]
gi|390841344|gb|EIP05280.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
TW09195]
gi|390855388|gb|EIP18108.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
TW14301]
gi|390859400|gb|EIP21751.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC4421]
gi|390859631|gb|EIP21975.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
TW14313]
gi|390871461|gb|EIP32872.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC4422]
gi|390875978|gb|EIP36976.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC4013]
gi|390885945|gb|EIP46117.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC4402]
gi|390887825|gb|EIP47746.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC4439]
gi|390894391|gb|EIP53909.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC4436]
gi|390897264|gb|EIP56604.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC1738]
gi|390909720|gb|EIP68494.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC1734]
gi|390910195|gb|EIP68949.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC4437]
gi|390915005|gb|EIP73535.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC4448]
gi|390924759|gb|EIP82507.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC1863]
gi|390926065|gb|EIP83669.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC1845]
gi|391275898|gb|EIQ34681.1| pyrimidine-specific ribonucleoside hydrolase rihA [Shigella boydii
965-58]
gi|408072096|gb|EKH06421.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA7]
gi|408075542|gb|EKH09774.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
FRIK920]
gi|408085900|gb|EKH19470.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA34]
gi|408089974|gb|EKH23266.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
FDA506]
gi|408095397|gb|EKH28381.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
FDA507]
gi|408102242|gb|EKH34658.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
FDA504]
gi|408109913|gb|EKH41771.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
FRIK1999]
gi|408116511|gb|EKH47808.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
FRIK1997]
gi|408121905|gb|EKH52798.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
NE1487]
gi|408130093|gb|EKH60263.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
NE037]
gi|408132206|gb|EKH62202.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
FRIK2001]
gi|408141258|gb|EKH70732.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA4]
gi|408150201|gb|EKH78809.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA23]
gi|408152598|gb|EKH81026.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA49]
gi|408157682|gb|EKH85825.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA45]
gi|408166697|gb|EKH94248.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
TT12B]
gi|408171986|gb|EKH99074.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
MA6]
gi|408174504|gb|EKI01488.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
5905]
gi|408186878|gb|EKI12889.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
CB7326]
gi|408191639|gb|EKI17239.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC96038]
gi|408191860|gb|EKI17456.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
5412]
gi|408232692|gb|EKI55861.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA38]
gi|408238881|gb|EKI61662.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC1735]
gi|408248892|gb|EKI70874.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC1736]
gi|408252743|gb|EKI74373.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC1737]
gi|408259101|gb|EKI80303.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC1846]
gi|408268278|gb|EKI88672.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC1847]
gi|408269896|gb|EKI90130.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC1848]
gi|408278806|gb|EKI98496.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC1849]
gi|408285079|gb|EKJ04131.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC1850]
gi|408287552|gb|EKJ06417.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC1856]
gi|408300341|gb|EKJ18044.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC1862]
gi|408300789|gb|EKJ18473.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC1864]
gi|408317395|gb|EKJ33633.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC1868]
gi|408317568|gb|EKJ33800.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC1866]
gi|408331296|gb|EKJ46487.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC1869]
gi|408336558|gb|EKJ51315.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
NE098]
gi|408338028|gb|EKJ52702.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EC1870]
gi|408350437|gb|EKJ64311.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
FRIK523]
gi|408353030|gb|EKJ66556.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
0.1304]
gi|408558408|gb|EKK34779.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
5.2239]
gi|408558919|gb|EKK35269.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
3.4870]
gi|408559977|gb|EKK36267.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
6.0172]
gi|408585151|gb|EKK60053.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
8.0586]
gi|408590109|gb|EKK64607.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
8.2524]
gi|408591845|gb|EKK66263.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
10.0833]
gi|408604037|gb|EKK77639.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
10.0869]
gi|408605489|gb|EKK78996.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
8.0416]
gi|408610106|gb|EKK83481.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
88.0221]
gi|408616935|gb|EKK90074.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
10.0821]
gi|427214349|gb|EKV83678.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
88.1042]
gi|427216410|gb|EKV85531.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
89.0511]
gi|427216777|gb|EKV85874.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
88.1467]
gi|427233588|gb|EKW01317.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
90.2281]
gi|427233742|gb|EKW01467.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
90.0039]
gi|427235972|gb|EKW03575.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
90.0091]
gi|427251313|gb|EKW17899.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
93.0056]
gi|427252787|gb|EKW19257.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
93.0055]
gi|427253967|gb|EKW20349.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
94.0618]
gi|427270164|gb|EKW35061.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
95.0943]
gi|427270401|gb|EKW35280.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
95.0183]
gi|427275553|gb|EKW40166.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
95.1288]
gi|427286131|gb|EKW49997.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
96.0428]
gi|427291860|gb|EKW55237.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
96.0427]
gi|427293592|gb|EKW56842.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
96.0939]
gi|427304591|gb|EKW67229.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
97.0003]
gi|427306156|gb|EKW68702.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
96.0932]
gi|427310417|gb|EKW72667.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
96.0107]
gi|427321231|gb|EKW82932.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
97.1742]
gi|427321962|gb|EKW83615.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
97.0007]
gi|427333903|gb|EKW94990.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
99.0713]
gi|427334070|gb|EKW95151.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
99.0678]
gi|427336684|gb|EKW97641.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
99.0672]
gi|429259926|gb|EKY43559.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
96.0109]
gi|429261680|gb|EKY45085.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
97.0010]
gi|430974052|gb|ELC90990.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE193]
gi|431143588|gb|ELE45311.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE66]
gi|431266704|gb|ELF58244.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE9]
gi|431318188|gb|ELG05955.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE50]
gi|431342205|gb|ELG29195.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE78]
gi|431345314|gb|ELG32236.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE79]
gi|431408026|gb|ELG91223.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE146]
gi|431478259|gb|ELH58008.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE202]
gi|431559167|gb|ELI32739.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE112]
gi|431587572|gb|ELI58945.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE125]
gi|444542270|gb|ELV21654.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
99.0814]
gi|444550452|gb|ELV28551.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
09BKT078844]
gi|444551589|gb|ELV29502.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
99.0815]
gi|444564691|gb|ELV41619.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
99.0839]
gi|444566839|gb|ELV43633.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
99.0816]
gi|444571063|gb|ELV47564.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
99.0848]
gi|444582038|gb|ELV57863.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
99.1753]
gi|444584852|gb|ELV60456.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
99.1775]
gi|444585856|gb|ELV61396.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
99.1793]
gi|444599416|gb|ELV74303.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
ATCC 700728]
gi|444599791|gb|ELV74649.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA11]
gi|444607921|gb|ELV82477.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
99.1805]
gi|444614198|gb|ELV88436.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA13]
gi|444614406|gb|ELV88634.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA19]
gi|444622994|gb|ELV96937.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA2]
gi|444631765|gb|ELW05350.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA48]
gi|444632421|gb|ELW05992.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA47]
gi|444636894|gb|ELW10278.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA8]
gi|444647262|gb|ELW20238.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
7.1982]
gi|444649768|gb|ELW22641.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
99.1781]
gi|444653342|gb|ELW26065.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
99.1762]
gi|444662346|gb|ELW34607.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA35]
gi|444666808|gb|ELW38866.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
3.4880]
gi|444672555|gb|ELW44265.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
95.0083]
gi|444674313|gb|ELW45868.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
99.0670]
Length = 311
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPE--PTFAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAVKPLMREL----------------IIADNVHGESGLDGPALPEPT 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVELMA-------KTLRESAEP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHVEDTERFR 206
>gi|379794735|ref|YP_005324733.1| putative inosine-uridine preferring nucleoside hydrolase
[Staphylococcus aureus subsp. aureus MSHR1132]
gi|356871725|emb|CCE58064.1| putative inosine-uridine preferring nucleoside hydrolase
[Staphylococcus aureus subsp. aureus MSHR1132]
Length = 311
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 79/185 (42%), Gaps = 33/185 (17%)
Query: 63 GLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKK 120
GL LP ++A + +P A V+IN + S P+T+ G TN A L+ P + +
Sbjct: 87 GLDGPKLPSTPSRHA-VAKP-ASDVIINKVMTSDTPVTIVATGPLTNVATALIREPRIAE 144
Query: 121 NIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHS 180
+IE I +MGG + GN P AEFNI+ D AA V S
Sbjct: 145 HIESITLMGGG------------------TFGNW-----TPTAEFNIWVDAEAAKRVFES 181
Query: 181 GIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWS-----GSPPFH 235
GI + + LD T + + FE N AQ+ + L+ + T+ P H
Sbjct: 182 GITINVFGLDVTHQVLADDQVIERFESINNPV-AQFVVELLQFFKKTYKTHFNMDGGPIH 240
Query: 236 EAYCM 240
+A +
Sbjct: 241 DACTI 245
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 116/283 (40%), Gaps = 55/283 (19%)
Query: 405 MGKPVVFDIDMSAGDFLALIYL--LKLPVELINLKGILVSSTGWATSATVDVVYDLLHMM 462
M K ++ D D D +ALI P+E++ + + + A ++L +M
Sbjct: 1 MKKKIIMDCDPGHDDAIALILAGASDSPLEILAVTTV---AGNQAVEKNTTNALNVLDIM 57
Query: 463 GRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRR 522
GR DI V G P I +A I SG LD LP +P R
Sbjct: 58 GRQDIEVAKG---------ADRPLIKPAAFASEIHGESG--LD-------GPKLPSTPSR 99
Query: 523 YTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQ-IIGL 581
+ + +P + + ++ S P +TI+ GPLTN+A +I
Sbjct: 100 HA-----------------VAKPASDVIINKVMTSDTP---VTIVATGPLTNVATALIRE 139
Query: 582 QNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
+ I+ + ++GG GN + AEFN+++D AAK VFES + I +
Sbjct: 140 PRIAEHIESITLMGGGTF-----GN-----WTPTAEFNIWVDAEAAKRVFESGITINVFG 189
Query: 642 LHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSH 684
L + +V + +++ + + P + F LLQ ++H
Sbjct: 190 LDVTHQVLADDQVIERF-ESINNPVAQFVVELLQFFKKTYKTH 231
>gi|345849127|ref|ZP_08802142.1| nucleoside hydrolase [Streptomyces zinciresistens K42]
gi|345639365|gb|EGX60857.1| nucleoside hydrolase [Streptomyces zinciresistens K42]
Length = 335
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 57/119 (47%), Gaps = 27/119 (22%)
Query: 77 APLRQPT---AQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGA 131
AP R P A +L I S P+T+ TN A+ L +P + +NIE I MGGA
Sbjct: 100 APTRAPAEADAVTLLRREILASPSPVTLIPTAPLTNIALLLRTHPEVTRNIERIVFMGGA 159
Query: 132 IRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLD 190
+ C N+T P AEFN++ DP AA +L +G+P+T+ LD
Sbjct: 160 V--ACGNAT--------------------PVAEFNVWHDPEAAAVLLTAGVPITMYGLD 196
>gi|417706268|ref|ZP_12355331.1| inosine-uridine preferring nucleoside hydrolase family protein
[Shigella flexneri VA-6]
gi|420329867|ref|ZP_14831570.1| pyrimidine-specific ribonucleoside hydrolase rihA [Shigella
flexneri K-1770]
gi|333007437|gb|EGK26917.1| inosine-uridine preferring nucleoside hydrolase family protein
[Shigella flexneri VA-6]
gi|391258767|gb|EIQ17854.1| pyrimidine-specific ribonucleoside hydrolase rihA [Shigella
flexneri K-1770]
Length = 311
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPE--PTFAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 106/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAVKPLM----------------RELIIADNVHGESGLDGPALPEPT 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVELMA-------KTLRESAEP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHVEDTERFR 206
>gi|70726906|ref|YP_253820.1| ribonucleoside hydrolase RihC [Staphylococcus haemolyticus
JCSC1435]
gi|68447630|dbj|BAE05214.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 299
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 25/139 (17%)
Query: 85 QQVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQ 144
+++L++ S PIT+ +G TN A+ + P +K +I I +MGG+
Sbjct: 109 REILLH--SDTPITLIALGPLTNIALLISTFPEVKDHIREIVLMGGS------------- 153
Query: 145 SEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVE 204
GN+ P AEFNI+SDP +A+ V S +P+T+I LD + ++ ++
Sbjct: 154 ----SGRGNV-----TPLAEFNIYSDPESAHIVFESDLPITMIGLDLARQSLLTHDYLAS 204
Query: 205 FERRQNTYEAQY-CFQSLK 222
FE T Y FQ +
Sbjct: 205 FEHLSRTSAMLYQIFQHYR 223
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 10/85 (11%)
Query: 564 ITILTNGPLTNLAQIIG-LQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFL 622
IT++ GPLTN+A +I I+++ ++GG+ G +GNV + AEFN++
Sbjct: 119 ITLIALGPLTNIALLISTFPEVKDHIREIVLMGGSSG----RGNV-----TPLAEFNIYS 169
Query: 623 DPLAAKAVFESKLEIKLIPLHMQRR 647
DP +A VFES L I +I L + R+
Sbjct: 170 DPESAHIVFESDLPITMIGLDLARQ 194
>gi|425304139|ref|ZP_18693926.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
N1]
gi|408231694|gb|EKI54958.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
N1]
Length = 311
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPE--PTFAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 106/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAVKPLM----------------RELIIADNVHGESGLDGPALPEPT 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVELMA-------KTLRESAEP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHVEDTERFR 206
>gi|330829058|ref|YP_004392010.1| Inosine-uridine preferring nucleoside hydrolase superfamily protein
[Aeromonas veronii B565]
gi|423210250|ref|ZP_17196804.1| hypothetical protein HMPREF1169_02322 [Aeromonas veronii AER397]
gi|328804194|gb|AEB49393.1| Inosine-uridine preferring nucleoside hydrolase superfamily
[Aeromonas veronii B565]
gi|404616138|gb|EKB13096.1| hypothetical protein HMPREF1169_02322 [Aeromonas veronii AER397]
Length = 322
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 71/122 (58%), Gaps = 17/122 (13%)
Query: 551 WKSIVESIE--PGSKITILTNGPLTNLAQIIGLQNSSSV---IQDVYIVGGNKGQDNEKG 605
W+ IVE+++ PG +IT++T GPLTNLA + LQ + + ++ V ++GG G + +G
Sbjct: 105 WQYIVEAVKAAPG-EITLVTIGPLTNLA--LALQQAPEIVSQVKQVVVMGGAFGVNGHRG 161
Query: 606 NVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFK--ILHKLRDRKK 663
NV + YAE N+ DP AA VF + + +I L + ++ SFF L +LRD+
Sbjct: 162 NV-----TPYAEANIHDDPDAADRVFTADWPVVIIGLDVTQQ--SFFSSVYLDELRDKAG 214
Query: 664 TP 665
P
Sbjct: 215 EP 216
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 69/154 (44%), Gaps = 28/154 (18%)
Query: 51 PVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNF 108
PVG V+ G + G AP +P A Q ++ A+ A P IT+ +G TN
Sbjct: 74 PVGPTTIVHGPSGFGD--MEAGEVTIAPDPRP-AWQYIVEAVKAAPGEITLVTIGPLTNL 130
Query: 109 AIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIF 168
A+ L P + ++ + VMGGA N + GN+ PYAE NI
Sbjct: 131 ALALQQAPEIVSQVKQVVVMGGAF------GVNGHR-------GNV-----TPYAEANIH 172
Query: 169 SDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFF 202
DP AA V + PV II LD T+ ++FF
Sbjct: 173 DDPDAADRVFTADWPVVIIGLDVTQ-----QSFF 201
>gi|416840291|ref|ZP_11903552.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus aureus O11]
gi|323440222|gb|EGA97936.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus aureus O11]
Length = 305
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 73/173 (42%), Gaps = 34/173 (19%)
Query: 78 PLRQPTA---QQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAI 132
P RQ A V+IN + S P+T+ G TN A L+ P + ++IE I +MGG
Sbjct: 91 PSRQAVAMPASDVIINKVMTSDTPVTIVATGPLTNVATALIREPRIAEHIESITLMGGG- 149
Query: 133 RSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
+ GN P AEFNI+ D AA V SGI + + LD T
Sbjct: 150 -----------------TFGNW-----TPTAEFNIWVDAEAAKRVFESGITINVFGLDVT 187
Query: 193 KTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWS-----GSPPFHEAYCM 240
+ E+ FE N AQ+ + L+ + T+ P H+A +
Sbjct: 188 HQVLADEHVIERFESINNPV-AQFVVELLQFFKKTYKTHFNMDGGPIHDACTI 239
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 543 RQPLAVDVWKSIVESI-EPGSKITILTNGPLTNLAQ-IIGLQNSSSVIQDVYIVGGNKGQ 600
RQ +A+ I+ + + +TI+ GPLTN+A +I + I+ + ++GG
Sbjct: 93 RQAVAMPASDVIINKVMTSDTPVTIVATGPLTNVATALIREPRIAEHIESITLMGGGT-- 150
Query: 601 DNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRD 660
GN + AEFN+++D AAK VFES + I + L + +V + ++ + +
Sbjct: 151 ---FGN-----WTPTAEFNIWVDAEAAKRVFESGITINVFGLDVTHQVLADEHVIERF-E 201
Query: 661 RKKTPESVFSQRLLQGLMTLQQSH 684
P + F LLQ ++H
Sbjct: 202 SINNPVAQFVVELLQFFKKTYKTH 225
>gi|420186039|ref|ZP_14692114.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIHLM040]
gi|394252897|gb|EJD97916.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIHLM040]
Length = 302
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 37/186 (19%)
Query: 85 QQVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQ 144
+ +L+N + P+T+ +G TN AI L + P ++ I+ I +MGG+
Sbjct: 109 RNLLVN--TQEPLTLIAIGPLTNIAILLTSYPEVQPFIKEIVLMGGSTGR---------- 156
Query: 145 SEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVE 204
GN+ P AEFNI+ DP AA V +SG+P+T+I LD + + +F +
Sbjct: 157 -------GNV-----TPLAEFNIYCDPEAAQIVFNSGLPLTMIGLDLAREALFTHHFVKD 204
Query: 205 FERRQNTYEAQY-CFQSLKMIRDTWSGSPPFHEAYCMWDSFMAGVALSIMLNSSSHNGEN 263
F+ T Y FQ K S F + ++D F + +L+ S N +
Sbjct: 205 FKDTNATSSMLYNLFQHYK--------SEDFEIGFKLYDVF----TILYLLDPESFNVKE 252
Query: 264 ACSEME 269
A +++E
Sbjct: 253 AYTQIE 258
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 15/138 (10%)
Query: 535 QDNDDPELRQPLAVDVWKSI-VESIEPGSKITILTNGPLTNLAQII-GLQNSSSVIQDVY 592
Q N D +L AV+ +++ V + EP +T++ GPLTN+A ++ I+++
Sbjct: 93 QINQD-DLTSIHAVEAMRNLLVNTQEP---LTLIAIGPLTNIAILLTSYPEVQPFIKEIV 148
Query: 593 IVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFF 652
++GG+ G +GNV + AEFN++ DP AA+ VF S L + +I L + R
Sbjct: 149 LMGGSTG----RGNV-----TPLAEFNIYCDPEAAQIVFNSGLPLTMIGLDLAREALFTH 199
Query: 653 KILHKLRDRKKTPESVFS 670
+ +D T +++
Sbjct: 200 HFVKDFKDTNATSSMLYN 217
>gi|254474859|ref|ZP_05088245.1| pyrimidine-specific ribonucleoside hydrolase RihA [Ruegeria sp.
R11]
gi|214029102|gb|EEB69937.1| pyrimidine-specific ribonucleoside hydrolase RihA [Ruegeria sp.
R11]
Length = 319
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 31/174 (17%)
Query: 94 AGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGN 153
AG +T+ +G +N A P + + ++ I +MGGA +GN
Sbjct: 125 AGTVTLCPLGPLSNIAAAFEQAPDIVERVQEIVLMGGAYFE----------------VGN 168
Query: 154 LYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYE 213
+ P AEFNI+ DP AA VL SG+PVT++PLD T ++ +E R +T
Sbjct: 169 I-----TPAAEFNIYVDPEAAEIVLTSGVPVTMMPLDVTHK-ALATRPRIEAIRALDTRV 222
Query: 214 AQYCFQSLKM-----IRDTWSGSPPFHE----AYCMWDSFMAGVALSIMLNSSS 258
+ + L + S P H+ AY + +G +++M+ +SS
Sbjct: 223 GHFTAEMLDFFERFDVEKYGSEGGPLHDPCVIAYLIQPELFSGRRINVMVETSS 276
Score = 47.0 bits (110), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 16/160 (10%)
Query: 506 SDTLYGLARDLPRSPRRYTAENSVRFGASQDNDDPELRQPLA----VDVWKSIVESI--E 559
SD RD P TAE+ D PEL +P ++ I++++ E
Sbjct: 67 SDVAVHAGRDAPLRRPLVTAEH---VHGKTGLDGPELWEPTMPLAEINGVDFIIDTLRRE 123
Query: 560 PGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFN 619
P +T+ GPL+N+A + + +++ V + G E GN+ + AEFN
Sbjct: 124 PAGTVTLCPLGPLSNIAA--AFEQAPDIVERVQEIVLMGGAYFEVGNI-----TPAAEFN 176
Query: 620 MFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLR 659
+++DP AA+ V S + + ++PL + + + + +R
Sbjct: 177 IYVDPEAAEIVLTSGVPVTMMPLDVTHKALATRPRIEAIR 216
>gi|418511807|ref|ZP_13078056.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
gi|366084392|gb|EHN48302.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
Length = 311
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 60/128 (46%), Gaps = 33/128 (25%)
Query: 67 AFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEH 124
+F PQ G TA +++ + S+ P+T+ G TN A+ L ++P L I
Sbjct: 96 SFAPQSG---------TAVELMAKTLRESSQPVTIVSTGPQTNVALLLNSHPELHTKIAR 146
Query: 125 IYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPV 184
I +MGGA+ ++GN P AEFNI+ DP AA V SGIPV
Sbjct: 147 IVIMGGAM-----------------ALGNW-----TPAAEFNIYVDPEAAEIVFQSGIPV 184
Query: 185 TIIPLDAT 192
+ LD T
Sbjct: 185 VMTGLDVT 192
Score = 46.2 bits (108), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 102/245 (41%), Gaps = 53/245 (21%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + +K I S+ T+ V +L ++ R
Sbjct: 1 MALPIIIDCDPGHDDAIALVLALASPE--LEVKAITSSAGNQTPEKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 PDIPV------AGGAVKPLM----------------RELIIADNVHGESGLDGPALP--- 93
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
E S A Q EL K++ ES +P +TI++ GP TN+A ++
Sbjct: 94 --EPSF---APQSGTAVELMA-------KTLRESSQP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+ I + I+GG N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHTKIARIVIMGGAMALGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMTGL 189
Query: 643 HMQRR 647
+ +
Sbjct: 190 DVTHK 194
>gi|359787743|ref|ZP_09290742.1| ribosylpyrimidine nucleosidase [Mesorhizobium alhagi CCNWXJ12-2]
gi|359256486|gb|EHK59325.1| ribosylpyrimidine nucleosidase [Mesorhizobium alhagi CCNWXJ12-2]
Length = 313
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 74/175 (42%), Gaps = 29/175 (16%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
+G +T+ +G TN A+ L+ P + I I +MGG F N +
Sbjct: 118 ESGAVTLCPLGPLTNIALALIREPQIAPRIREIVLMGGGF----FEGGNIT--------- 164
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT-KTIPVSENF--FVEFERRQ 209
P AEFNI+ DP AA VL SGIP+ ++PLD T K + ++ F E R
Sbjct: 165 --------PTAEFNIYVDPHAADIVLKSGIPIVMMPLDVTHKALTTAKRVAAFRELGTRV 216
Query: 210 NTYEAQYC--FQSLKMIRDTWSGSP---PFHEAYCMWDSFMAGVALSIMLNSSSH 259
A+ F+ + G P P AY + F G ++ + +SS
Sbjct: 217 GVATAEMLEFFERFDEEKYGTDGGPLHDPCVIAYLLKPEFFKGRRCNVTVETSSE 271
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 70/128 (54%), Gaps = 23/128 (17%)
Query: 539 DP--ELRQPLAVDVWKSIVESI--EPGSKITILTNGPLTNLA-QIIGLQNSSSVIQDVYI 593
DP +L++ AVD IVE++ E +T+ GPLTN+A +I + I+++ +
Sbjct: 96 DPTMKLQEQHAVDF---IVETLMREESGAVTLCPLGPLTNIALALIREPQIAPRIREIVL 152
Query: 594 VGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQ-------R 646
+GG E GN+ + AEFN+++DP AA V +S + I ++PL + +
Sbjct: 153 MGGGF---FEGGNI-----TPTAEFNIYVDPHAADIVLKSGIPIVMMPLDVTHKALTTAK 204
Query: 647 RVASFFKI 654
RVA+F ++
Sbjct: 205 RVAAFREL 212
>gi|416269747|ref|ZP_11642508.1| Inosine-uridine preferring nucleoside hydrolase [Shigella
dysenteriae CDC 74-1112]
gi|320174699|gb|EFW49831.1| Inosine-uridine preferring nucleoside hydrolase [Shigella
dysenteriae CDC 74-1112]
Length = 311
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPE--PTFAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAVKPLMREL----------------IIADNVHGESGLDGPALPEPT 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVELMA-------KTLRESAEP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAHIHIEDTERFR 206
>gi|126462326|ref|YP_001043440.1| inosine/uridine-preferring nucleoside hydrolase [Rhodobacter
sphaeroides ATCC 17029]
gi|429209120|ref|ZP_19200360.1| Inosine-uridine preferring nucleoside hydrolase [Rhodobacter sp.
AKP1]
gi|126103990|gb|ABN76668.1| Inosine/uridine-preferring nucleoside hydrolase [Rhodobacter
sphaeroides ATCC 17029]
gi|428188006|gb|EKX56578.1| Inosine-uridine preferring nucleoside hydrolase [Rhodobacter sp.
AKP1]
Length = 313
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 66/152 (43%), Gaps = 27/152 (17%)
Query: 44 CRYRQAIPVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAIS---AGPITVF 100
C A P+ +V+ GL LP PL++ A LI + AG IT+
Sbjct: 69 CDAPLARPLVTAEHVHGKTGLDGPALPD---PTLPLQERHAVDYLIETLRSEPAGSITLC 125
Query: 101 VMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSN 160
+G TN A L P + I I +MGGA +GN+
Sbjct: 126 PLGPLTNIATMLQRAPDVAPRIREIVLMGGAYFE----------------VGNI-----T 164
Query: 161 PYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
P AEFNIF DP AA V +G+P+ ++PLD T
Sbjct: 165 PTAEFNIFVDPEAAAIVFGAGVPLVVMPLDVT 196
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 102/260 (39%), Gaps = 53/260 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P ID G A+ LL L + + GI + T L + GR
Sbjct: 1 MTPPRRIIIDTDPGQDDAVAILLALASPELEVLGITAVAGNVPLRLTERNARILCEIAGR 60
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDT-LYGLARDLPRSPRRY 523
DIPV GC A PL + + T L G A P P
Sbjct: 61 TDIPV-----------------FAGCDAPLARPLVTAEHVHGKTGLDGPALPDPTLP--- 100
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
L++ AVD + S EP IT+ GPLTN+A + LQ
Sbjct: 101 ------------------LQERHAVDYLIETLRS-EPAGSITLCPLGPLTNIATM--LQR 139
Query: 584 SSSV---IQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLI 640
+ V I+++ ++GG E GN+ + AEFN+F+DP AA VF + + + ++
Sbjct: 140 APDVAPRIREIVLMGGAY---FEVGNI-----TPTAEFNIFVDPEAAAIVFGAGVPLVVM 191
Query: 641 PLHMQRRVASFFKILHKLRD 660
PL + + + + + R+
Sbjct: 192 PLDVTHKAVTDRARVARFRE 211
>gi|420384280|ref|ZP_14883666.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EPECa12]
gi|391309116|gb|EIQ66793.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
EPECa12]
Length = 260
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 30 VHGESGLDGPALPEPA--FAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 86
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 87 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 124
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 125 IVFQSGIPVVMAGLDVT 141
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 13/109 (11%)
Query: 552 KSIVESIEPGSKITILTNGPLTNLAQIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTV 610
K++ ES EP +TI++ GP TN+A ++ S I + I+GG G N
Sbjct: 59 KTLRESAEP---VTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGLGN-------- 107
Query: 611 PSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLR 659
+ AEFN+++DP AA+ VF+S + + + L + + + + R
Sbjct: 108 -WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGLDVTHKAQIHVEDTERFR 155
>gi|301028867|ref|ZP_07192042.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 196-1]
gi|299878155|gb|EFI86366.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 196-1]
Length = 285
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 55 VHGESGLDGPALPEP--TFAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 111
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 112 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 149
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 150 IVFQSGIPVVMAGLDVT 166
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 13/109 (11%)
Query: 552 KSIVESIEPGSKITILTNGPLTNLAQIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTV 610
K++ ES EP +TI++ GP TN+A ++ S I + I+GG G N
Sbjct: 84 KTLRESAEP---VTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGLGN-------- 132
Query: 611 PSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLR 659
+ AEFN+++DP AA+ VF+S + + + L + + + + R
Sbjct: 133 -WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGLDVTHKAQIHVEDTERFR 180
>gi|420319024|ref|ZP_14820880.1| pyrimidine-specific ribonucleoside hydrolase rihA [Shigella
flexneri 2850-71]
gi|391254317|gb|EIQ13479.1| pyrimidine-specific ribonucleoside hydrolase rihA [Shigella
flexneri 2850-71]
Length = 246
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPE--PTFAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 106/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLHNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAVKPLM----------------RELIIADNVHGESGLDGPALPEPT 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVELMA-------KTLRESAEP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHVEDTERFR 206
>gi|167746913|ref|ZP_02419040.1| hypothetical protein ANACAC_01625 [Anaerostipes caccae DSM 14662]
gi|167653873|gb|EDR98002.1| Inosine-uridine preferring nucleoside hydrolase [Anaerostipes
caccae DSM 14662]
Length = 308
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 13/129 (10%)
Query: 537 NDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIG-LQNSSSVIQDVYIVG 595
N + L++ + ++ ++ES E K+TILT GPLTN+A +I IQ++ +G
Sbjct: 96 NKELLLKENAVLSEYRVLMESEE---KVTILTLGPLTNIALLISTFPEVKEKIQEIVTMG 152
Query: 596 GNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKIL 655
G+ E+GN+ Y EFN+ +DP AAK VF S + I ++ L + R+ + L
Sbjct: 153 GS----TERGNI-----GIYGEFNVTIDPEAAKIVFRSGIPITMVGLDIGRKARLTVEDL 203
Query: 656 HKLRDRKKT 664
KL + +T
Sbjct: 204 EKLEESGET 212
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 22/94 (23%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
+T+ +G TN A+ + P +K+ I+ I MGG+ GN+
Sbjct: 120 VTILTLGPLTNIALLISTFPEVKEKIQEIVTMGGSTER-----------------GNI-- 160
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLD 190
Y EFN+ DP AA V SGIP+T++ LD
Sbjct: 161 ---GIYGEFNVTIDPEAAKIVFRSGIPITMVGLD 191
>gi|419157973|ref|ZP_13702496.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
DEC6D]
gi|378013413|gb|EHV76331.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
DEC6D]
Length = 260
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 30 VHGESGLDGPALPE--PTFAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 86
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 87 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 124
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 125 IVFQSGIPVVMAGLDVT 141
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 13/109 (11%)
Query: 552 KSIVESIEPGSKITILTNGPLTNLAQIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTV 610
K++ ES EP +TI++ GP TN+A ++ S I + I+GG G N
Sbjct: 59 KTLRESAEP---VTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGLGN-------- 107
Query: 611 PSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLR 659
+ AEFN+++DP AA+ VF+S + + + L + + + + R
Sbjct: 108 -WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGLDVTHKAQIHVEDTERFR 155
>gi|336310122|ref|ZP_08565094.1| inosine-uridine preferring nucleoside hydrolase [Shewanella sp.
HN-41]
gi|335865852|gb|EGM70843.1| inosine-uridine preferring nucleoside hydrolase [Shewanella sp.
HN-41]
Length = 318
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 68/148 (45%), Gaps = 31/148 (20%)
Query: 51 PVGQRLYVNTNY----GLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGS 104
P+ + L + N GL LPQ +AP + A +++ I S P+T+ G
Sbjct: 70 PLARELMIADNVHGETGLDGPALPQ--PSFAP-QTLNAVELMAEKIRQSDKPVTLVPTGP 126
Query: 105 HTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAE 164
TN A+ L ++P L IE I +MGGA +GN P AE
Sbjct: 127 LTNIALLLASHPELHVKIERIVLMGGAA-----------------GVGNW-----TPAAE 164
Query: 165 FNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
FNIF DP AA V SGIP+T+ LD T
Sbjct: 165 FNIFVDPEAADIVFKSGIPITMCGLDVT 192
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 105/261 (40%), Gaps = 61/261 (23%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M +P++ D D D +ALI L P +N + S+ T++ +L ++ R
Sbjct: 1 MSRPIILDCDPGHDDAIALILALAHPE--LNPLAVTTSAGNQTPDKTLNNALRILTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV A G V P LAR+L
Sbjct: 59 GDIPV------AGGAVKP-----------------------------LAREL------MI 77
Query: 525 AENSVRFGASQDNDDPELRQP----LAVDVWKSIVESIEPGSK-ITILTNGPLTNLAQII 579
A+N D P L QP ++ + + E I K +T++ GPLTN+A ++
Sbjct: 78 ADN---VHGETGLDGPALPQPSFAPQTLNAVELMAEKIRQSDKPVTLVPTGPLTNIALLL 134
Query: 580 GLQNSSSV-IQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIK 638
V I+ + ++GG G N + AEFN+F+DP AA VF+S + I
Sbjct: 135 ASHPELHVKIERIVLMGGAAGVGN---------WTPAAEFNIFVDPEAADIVFKSGIPIT 185
Query: 639 LIPLHMQRRVASFFKILHKLR 659
+ L + + + + ++R
Sbjct: 186 MCGLDVTHQAQIMDEDIERIR 206
>gi|406658539|ref|ZP_11066679.1| cytidine/uridine-specific hydrolase [Streptococcus iniae 9117]
gi|405578754|gb|EKB52868.1| cytidine/uridine-specific hydrolase [Streptococcus iniae 9117]
Length = 303
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 22/97 (22%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
IT+ +G+ TN A+ + P +KKNI I +MGGAI GN
Sbjct: 118 ITIVSIGAMTNLALLISMYPDIKKNITEIVMMGGAIHG-----------------GN--- 157
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
++ AEFN+ SDP AA V SGIP+T+I LD T+
Sbjct: 158 --TSSLAEFNVASDPHAAAIVFSSGIPLTMIGLDVTE 192
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 22/194 (11%)
Query: 564 ITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFL 622
ITI++ G +TNLA +I + + I ++ ++GG N +S AEFN+
Sbjct: 118 ITIVSIGAMTNLALLISMYPDIKKNITEIVMMGGAIHGGN---------TSSLAEFNVAS 168
Query: 623 DPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQ 682
DP AA VF S + + +I L + + + K+++ T + ++ G +L
Sbjct: 169 DPHAAAIVFSSGIPLTMIGLDVTEKALFYRDAAIKMKESGPTGQMLYQLFEHYGGPSLDM 228
Query: 683 SHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLV 742
+ H T + P L T K + L ++++G G II N +
Sbjct: 229 G-MTIHDAST--------IAYLSQPDLFTTEK-RYLRVVTEG--LAAGAIITNSHYEPVP 276
Query: 743 KVLESLNVAVYYDH 756
K LE++ V + DH
Sbjct: 277 KELENVTVCMAVDH 290
>gi|383636202|ref|ZP_09950608.1| nucleoside hydrolase [Streptomyces chartreusis NRRL 12338]
Length = 321
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 68/150 (45%), Gaps = 33/150 (22%)
Query: 51 PVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPT---AQQVLINAISAGP--ITVFVMGSH 105
PV +V+ G+ LP AP R P A +L I A P +T+ M
Sbjct: 78 PVRTARHVHGQDGMGDLGLP------APTRVPVDVDAVTLLRREILASPRPVTLIPMAPL 131
Query: 106 TNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEF 165
TN A+ L +P + NIE I MGGA+ + GN + P AEF
Sbjct: 132 TNIALLLRTHPEVTGNIERIVFMGGAV-----------------ATGN-----ATPVAEF 169
Query: 166 NIFSDPFAAYTVLHSGIPVTIIPLDATKTI 195
N++ DP AA +L +G+P+T+ LD K +
Sbjct: 170 NVWHDPEAAAVLLTAGVPITMYGLDVFKKV 199
>gi|221639330|ref|YP_002525592.1| Nucleoside hydrolase [Rhodobacter sphaeroides KD131]
gi|221160111|gb|ACM01091.1| Nucleoside hydrolase [Rhodobacter sphaeroides KD131]
Length = 313
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 73/176 (41%), Gaps = 32/176 (18%)
Query: 20 NGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQRLYVNTNYGLRKAFLPQGGRKYAPL 79
N IL ++ G I C A P+ +V+ GL LP PL
Sbjct: 50 NARILCEIAGRTDI-----PVFAGCDAPLARPLVTAEHVHGKTGLDGPALPD---PTLPL 101
Query: 80 RQPTAQQVLINAIS---AGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDC 136
++ A LI + AG IT+ +G TN A L P + I I +MGGA
Sbjct: 102 QERHAVDYLIETLRSEPAGSITLCPLGPLTNIATMLQRAPDVAPRIREIVLMGGAYFE-- 159
Query: 137 FNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
+GN+ P AEFNIF DP AA V +G+P+ ++PLD T
Sbjct: 160 --------------VGNI-----TPTAEFNIFVDPEAAAIVFGAGVPLVVMPLDVT 196
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 98/250 (39%), Gaps = 53/250 (21%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P ID G A+ LL L + + GI + T L + GR
Sbjct: 1 MTPPRRIIIDTDPGQDDAVAILLALASPELEVLGITAVAGNVPLRLTERNARILCEIAGR 60
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDT-LYGLARDLPRSPRRY 523
DIPV GC A PL + + T L G A P P
Sbjct: 61 TDIPV-----------------FAGCDAPLARPLVTAEHVHGKTGLDGPALPDPTLP--- 100
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
L++ AVD + S EP IT+ GPLTN+A + LQ
Sbjct: 101 ------------------LQERHAVDYLIETLRS-EPAGSITLCPLGPLTNIATM--LQR 139
Query: 584 SSSV---IQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLI 640
+ V I+++ ++GG E GN+ + AEFN+F+DP AA VF + + + ++
Sbjct: 140 APDVAPRIREIVLMGGAY---FEVGNI-----TPTAEFNIFVDPEAAAIVFGAGVPLVVM 191
Query: 641 PLHMQRRVAS 650
PL + + +
Sbjct: 192 PLDVTHKAVT 201
>gi|157146738|ref|YP_001454057.1| ribonucleoside hydrolase 1 [Citrobacter koseri ATCC BAA-895]
gi|166226412|sp|A8AJF8.1|RIHA_CITK8 RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|157083943|gb|ABV13621.1| hypothetical protein CKO_02512 [Citrobacter koseri ATCC BAA-895]
Length = 312
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + S P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPE--PSFAP-QTCTAVELMAKTLRESPEPVTIVATGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L + I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHRKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 105/252 (41%), Gaps = 67/252 (26%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M PV+FD D D +A++ L P +++K I S+ T+ V +L ++GR
Sbjct: 1 MALPVLFDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPDKTLRNVLRMLTLLGR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
+DIPV A G + P L RDL
Sbjct: 59 NDIPV------AGGAIKP-----------------------------LMRDL------II 77
Query: 525 AENSVRFGASQDNDDPELRQP-------LAVDVW-KSIVESIEPGSKITILTNGPLTNLA 576
A+N D P L +P AV++ K++ ES EP +TI+ GP TN+A
Sbjct: 78 ADN---VHGESGLDGPALPEPSFAPQTCTAVELMAKTLRESPEP---VTIVATGPQTNVA 131
Query: 577 QIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ I + I+GG G N + AEFN+++DP AA+ VF+S +
Sbjct: 132 LLLNSHPELHRKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGI 182
Query: 636 EIKLIPLHMQRR 647
+ + L + +
Sbjct: 183 PVVMAGLDVTHK 194
>gi|317471722|ref|ZP_07931063.1| inosine-uridine preferring nucleoside hydrolase [Anaerostipes sp.
3_2_56FAA]
gi|316900826|gb|EFV22799.1| inosine-uridine preferring nucleoside hydrolase [Anaerostipes sp.
3_2_56FAA]
Length = 308
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 13/129 (10%)
Query: 537 NDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIG-LQNSSSVIQDVYIVG 595
N + L++ + ++ ++ES E K+TILT GPLTN+A +I IQ++ +G
Sbjct: 96 NKELLLKENAVLSEYRVLMESEE---KVTILTLGPLTNIALLISTFPEVKEKIQEIVTMG 152
Query: 596 GNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKIL 655
G+ E+GN+ Y EFN+ +DP AAK VF S + I ++ L + R+ + L
Sbjct: 153 GS----TERGNI-----GIYGEFNVTIDPEAAKIVFRSGIPITMVGLDIGRKARLTVEDL 203
Query: 656 HKLRDRKKT 664
KL + +T
Sbjct: 204 EKLEESGET 212
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 22/94 (23%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
+T+ +G TN A+ + P +K+ I+ I MGG+ GN+
Sbjct: 120 VTILTLGPLTNIALLISTFPEVKEKIQEIVTMGGSTER-----------------GNI-- 160
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLD 190
Y EFN+ DP AA V SGIP+T++ LD
Sbjct: 161 ---GIYGEFNVTIDPEAAKIVFRSGIPITMVGLD 191
>gi|366161467|ref|ZP_09461329.1| ribonucleoside hydrolase 1 [Escherichia sp. TW09308]
Length = 311
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPEPA--FAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHNKIAQIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMSGLDVT 192
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 108/267 (40%), Gaps = 73/267 (27%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPDKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV A G V P L RDL
Sbjct: 59 TDIPV------AGGAVKP-----------------------------LMRDL------II 77
Query: 525 AENSVRFGASQDNDDPELRQP-------LAVDVW-KSIVESIEPGSKITILTNGPLTNLA 576
A+N D P L +P AV++ K++ ES EP +TI++ GP TN+A
Sbjct: 78 ADN---VHGESGLDGPALPEPAFAPQNCTAVELMAKTLRESAEP---VTIVSTGPQTNVA 131
Query: 577 QIIG----LQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFE 632
++ L N I + I+GG G N + AEFN+++DP AA+ VF+
Sbjct: 132 LLLNSHPELHNK---IAQIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQ 179
Query: 633 SKLEIKLIPLHMQRRVASFFKILHKLR 659
S + + + L + + + + R
Sbjct: 180 SGIPVVMSGLDVTHKAQIHVEDTERFR 206
>gi|332558348|ref|ZP_08412670.1| Nucleoside hydrolase [Rhodobacter sphaeroides WS8N]
gi|332276060|gb|EGJ21375.1| Nucleoside hydrolase [Rhodobacter sphaeroides WS8N]
Length = 313
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 72/171 (42%), Gaps = 28/171 (16%)
Query: 44 CRYRQAIPVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAIS---AGPITVF 100
C A P+ +V+ GL LP PL++ A LI + AG IT+
Sbjct: 69 CDAPLARPLVTAEHVHGKTGLDGPALPD---PTLPLQERHAVDYLIETLRSEPAGSITLC 125
Query: 101 VMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSN 160
+G TN A L P + I I +MGGA +GN+
Sbjct: 126 PLGPLTNIATMLQRAPDVAPRIREIVLMGGAYFE----------------VGNI-----T 164
Query: 161 PYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNT 211
P AEFNIF DP AA V +G+P+ ++PLD T V++ V R T
Sbjct: 165 PTAEFNIFVDPEAAAIVFGAGVPLVVMPLDVTHKA-VTDRVRVALFREMGT 214
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 14/112 (12%)
Query: 542 LRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSV---IQDVYIVGGNK 598
L++ AVD + S EP IT+ GPLTN+A + LQ + V I+++ ++GG
Sbjct: 101 LQERHAVDYLIETLRS-EPAGSITLCPLGPLTNIATM--LQRAPDVAPRIREIVLMGGAY 157
Query: 599 GQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVAS 650
E GN+ + AEFN+F+DP AA VF + + + ++PL + + +
Sbjct: 158 ---FEVGNI-----TPTAEFNIFVDPEAAAIVFGAGVPLVVMPLDVTHKAVT 201
>gi|310817176|ref|YP_003965140.1| pyrimidine-specific ribonucleoside hydrolase RihA
[Ketogulonicigenium vulgare Y25]
gi|385234752|ref|YP_005796094.1| inosine-uridine preferring nucleoside hydrolase transmembrane
protein [Ketogulonicigenium vulgare WSH-001]
gi|308755911|gb|ADO43840.1| pyrimidine-specific ribonucleoside hydrolase RihA
[Ketogulonicigenium vulgare Y25]
gi|343463663|gb|AEM42098.1| putative inosine-uridine preferring nucleoside hydrolase
transmembrane protein [Ketogulonicigenium vulgare
WSH-001]
Length = 318
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 81/192 (42%), Gaps = 52/192 (27%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQRLYVNT 60
++NR D+PV G EG ++ +P+ +V+
Sbjct: 59 LVNRTDVPVYKGAEGPLM-------------------------------VPLETAEHVHG 87
Query: 61 NYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKK 120
G LP+ A P L+ + G +T+ + TN A+ ++ P L
Sbjct: 88 RTGFDGYDLPEPKATAAAGFAPEKIVELVMSRPKGTVTLACLAPLTNIALAMLLEPKLAG 147
Query: 121 NIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHS 180
++ I +MGGA R++ N T P AE+NI++DP AA+ V++S
Sbjct: 148 HLREIVLMGGA-RTEGGNIT--------------------PAAEYNIYADPEAAWRVMNS 186
Query: 181 GIPVTIIPLDAT 192
G+PV +IPLD T
Sbjct: 187 GVPVVMIPLDCT 198
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 57/111 (51%), Gaps = 11/111 (9%)
Query: 552 KSIVESI--EPGSKITILTNGPLTNLAQIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVF 608
+ IVE + P +T+ PLTN+A + L+ + ++++ ++GG + E GN+
Sbjct: 110 EKIVELVMSRPKGTVTLACLAPLTNIALAMLLEPKLAGHLREIVLMGGAR---TEGGNI- 165
Query: 609 TVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLR 659
+ AE+N++ DP AA V S + + +IPL + + ++ LR
Sbjct: 166 ----TPAAEYNIYADPEAAWRVMNSGVPVVMIPLDCTHKALTTTPRMNALR 212
>gi|255035748|ref|YP_003086369.1| inosine/uridine-preferring nucleoside hydrolase [Dyadobacter
fermentans DSM 18053]
gi|254948504|gb|ACT93204.1| Inosine/uridine-preferring nucleoside hydrolase [Dyadobacter
fermentans DSM 18053]
Length = 313
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 49/102 (48%), Gaps = 22/102 (21%)
Query: 91 AISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDS 150
A S +T+ G TN A FL+ PHLK I I +MGG I
Sbjct: 114 AASETSVTIVPTGPLTNIATFLLAYPHLKPKIARISLMGGGIFR---------------- 157
Query: 151 IGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
GN+ P AEFNI++DP AA V SG+P+T+ LD T
Sbjct: 158 -GNM-----TPLAEFNIYTDPEAAAIVFKSGVPITMCGLDVT 193
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 105/253 (41%), Gaps = 51/253 (20%)
Query: 408 PVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDI 467
PV+ D D D A++ +L ++++ + +S+ T+ +L ++G DI
Sbjct: 5 PVIIDCDPGLDD--AVMLMLAHGSGQLDIRAVTISAGNQTQEKTMLNALKVLSLIGATDI 62
Query: 468 PVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAEN 527
PV G NP F + A + G G LD +L P R EN
Sbjct: 63 PV------YHGAENPLFREL----IADGVVHGESG-LDGPSL-------PIPDMRPQPEN 104
Query: 528 SVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQ-IIGLQNSSS 586
+++ AS ++ + E + +TI+ GPLTN+A ++ +
Sbjct: 105 AIQGIAS-------------------VLAASE--TSVTIVPTGPLTNIATFLLAYPHLKP 143
Query: 587 VIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQR 646
I + ++GG +F + AEFN++ DP AA VF+S + I + L +
Sbjct: 144 KIARISLMGGG---------IFRGNMTPLAEFNIYTDPEAAAIVFKSGVPITMCGLDVTH 194
Query: 647 RVASFFKILHKLR 659
+ F K + LR
Sbjct: 195 KALVFQKDIELLR 207
>gi|77463471|ref|YP_352975.1| nucleoside hydrolase [Rhodobacter sphaeroides 2.4.1]
gi|77387889|gb|ABA79074.1| Nucleoside hydrolase [Rhodobacter sphaeroides 2.4.1]
Length = 313
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 66/152 (43%), Gaps = 27/152 (17%)
Query: 44 CRYRQAIPVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAIS---AGPITVF 100
C A P+ +V+ GL LP PL++ A LI + AG IT+
Sbjct: 69 CDAPLARPLVTAEHVHGKTGLDGPALPD---PTLPLQERHAVDYLIETLRSEPAGSITLC 125
Query: 101 VMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSN 160
+G TN A L P + I I +MGGA +GN+
Sbjct: 126 PLGPLTNIAAMLQRAPDVAPRIREIVLMGGAYFE----------------VGNI-----T 164
Query: 161 PYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
P AEFNIF DP AA V +G+P+ ++PLD T
Sbjct: 165 PTAEFNIFVDPEAAAIVFGAGVPLVVMPLDVT 196
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 102/260 (39%), Gaps = 53/260 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P ID G A+ LL L + + GI + T L + GR
Sbjct: 1 MTPPRRIIIDTDPGQDDAVAILLALASPELEVLGITAVAGNVPLRLTERNARILCEIAGR 60
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDT-LYGLARDLPRSPRRY 523
DIPV GC A PL + + T L G A P P
Sbjct: 61 TDIPV-----------------FAGCDAPLARPLVTAEHVHGKTGLDGPALPDPTLP--- 100
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
L++ AVD + S EP IT+ GPLTN+A + LQ
Sbjct: 101 ------------------LQERHAVDYLIETLRS-EPAGSITLCPLGPLTNIAAM--LQR 139
Query: 584 SSSV---IQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLI 640
+ V I+++ ++GG E GN+ + AEFN+F+DP AA VF + + + ++
Sbjct: 140 APDVAPRIREIVLMGGAY---FEVGNI-----TPTAEFNIFVDPEAAAIVFGAGVPLVVM 191
Query: 641 PLHMQRRVASFFKILHKLRD 660
PL + + + + + R+
Sbjct: 192 PLDVTHKAVTDRARVARFRE 211
>gi|402840761|ref|ZP_10889222.1| cytidine/uridine-specific hydrolase [Klebsiella sp. OBRC7]
gi|423102884|ref|ZP_17090586.1| pyrimidine-specific ribonucleoside hydrolase rihA [Klebsiella
oxytoca 10-5242]
gi|376386918|gb|EHS99628.1| pyrimidine-specific ribonucleoside hydrolase rihA [Klebsiella
oxytoca 10-5242]
gi|402285075|gb|EJU33566.1| cytidine/uridine-specific hydrolase [Klebsiella sp. OBRC7]
Length = 311
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 52/118 (44%), Gaps = 22/118 (18%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
SA P+T+ G TN A+ L ++P L I+ I +MGGA+ +G
Sbjct: 115 SAEPVTIVATGPQTNVALLLNSHPELHAKIDRIVIMGGAM-----------------VLG 157
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQN 210
N P EFNI+ DP AA V SGIPV + LD T + F R N
Sbjct: 158 NW-----QPAVEFNIYVDPEAAEIVFQSGIPVVMAGLDVTHKAQIHVEDIERFRRIGN 210
Score = 46.6 bits (109), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 111/279 (39%), Gaps = 68/279 (24%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M PV+ D D D +AL+ L P +N+K + S+ T+ V +L ++ R
Sbjct: 1 MALPVIIDCDPGHDDAIALVLALASPE--LNVKAVTSSAGNQTPDKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV +GG L L R+L
Sbjct: 59 PDIPV------------------------------AGGALKP-----LMREL------II 77
Query: 525 AENSVRFGASQDNDDPELRQP-------LAVDVW-KSIVESIEPGSKITILTNGPLTNLA 576
A+N D P L +P AV++ K++ +S EP +TI+ GP TN+A
Sbjct: 78 ADN---VHGESGLDGPALPEPGFAAQACTAVELMAKTLRDSAEP---VTIVATGPQTNVA 131
Query: 577 QIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ + I + I+GG N + V EFN+++DP AA+ VF+S +
Sbjct: 132 LLLNSHPELHAKIDRIVIMGGAMVLGNWQPAV---------EFNIYVDPEAAEIVFQSGI 182
Query: 636 EIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLL 674
+ + L + + + + + R R P S LL
Sbjct: 183 PVVMAGLDVTHKAQIHVEDIERFR-RIGNPISTIVAELL 220
>gi|422652107|ref|ZP_16714895.1| inosine-uridine preferring nucleoside hydrolase [Pseudomonas
syringae pv. actinidiae str. M302091]
gi|330965178|gb|EGH65438.1| inosine-uridine preferring nucleoside hydrolase [Pseudomonas
syringae pv. actinidiae str. M302091]
Length = 330
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 127/289 (43%), Gaps = 35/289 (12%)
Query: 434 INLKGILVSSTGWATSATVDVVYDLLHMMGRDDIPVGLGDVFAVGEVNPKFPPIGGCKYA 493
+N K I+ + GW D V + ++M R DI + V GE + + G A
Sbjct: 1 MNRKVIIDTDMGW------DDVLSIAYLMKRPDIDIIGITVTGCGETDLGW----GVIIA 50
Query: 494 KAIPLGSGGFLDSDTLYGLARDLP---RSPRRYTAENSVRFGASQDNDDPELRQPLAVDV 550
+ + LG G LD+ G + L R P+ + + + G + L Q +
Sbjct: 51 QHL-LGIGNQLDTVVARGTDQPLEYDNRFPQPFKNDMNDVMGLLGTLNPAALPQVSTLSA 109
Query: 551 WKSIVESIEPG-SKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFT 609
W+ + ++++ KIT+L+ G TN+A ++ L + + +Q + + G GNV
Sbjct: 110 WEFMYQTVKNSQDKITVLSLGGFTNIANMLSLSSQPTDLQMIDQIVAMAGAVYVDGNVAA 169
Query: 610 V-------------PSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILH 656
+ S+ YAE+N+F+DP+AA VF S L + L+PL + +V IL
Sbjct: 170 LNDVQPAWDQGESYRSNHYAEWNVFVDPVAANIVFGSSLPLTLVPLDVCNQV-----ILD 224
Query: 657 KLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGG 705
++ T + + Q L T +H + V F + L +++ G
Sbjct: 225 ATYSKQITATDPVATLVRQVLETKSGTHAEGYPVPIF--DPLATMLMAG 271
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 93 SAGPITVFVMGSHTNFA--IFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDS 150
S ITV +G TN A + L + P + I+ I M GA+ D + + D
Sbjct: 120 SQDKITVLSLGGFTNIANMLSLSSQPTDLQMIDQIVAMAGAVYVDGNVAALNDVQPAWDQ 179
Query: 151 IGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENF 201
G Y SN YAE+N+F DP AA V S +P+T++PLD + + +
Sbjct: 180 -GESY--RSNHYAEWNVFVDPVAANIVFGSSLPLTLVPLDVCNQVILDATY 227
>gi|395227363|ref|ZP_10405689.1| ribonucleoside hydrolase 1 [Citrobacter sp. A1]
gi|424728933|ref|ZP_18157538.1| ribonucleoside hydrolase 1 [Citrobacter sp. L17]
gi|394718691|gb|EJF24312.1| ribonucleoside hydrolase 1 [Citrobacter sp. A1]
gi|422896804|gb|EKU36586.1| ribonucleoside hydrolase 1 [Citrobacter sp. L17]
Length = 311
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + S P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPE--PTFAP-QDCTAVELMAKTLRESPEPMTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I+ I +MGGA+ +GN P AEFNIF DP AA
Sbjct: 138 PELHAKIDRIVIMGGAM-----------------GLGNW-----TPAAEFNIFVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 104/245 (42%), Gaps = 53/245 (21%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++FD D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILFDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPDKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G + P + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAMKPLM----------------RDLIIADNVHGESGLDGPALPEPT 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A QD EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FA--------PQDCTAVELMA-------KTLRESPEP---MTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+ I + I+GG G N + AEFN+F+DP AA+ VF+S + + + L
Sbjct: 139 ELHAKIDRIVIMGGAMGLGN---------WTPAAEFNIFVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRR 647
+ +
Sbjct: 190 DVTHK 194
>gi|417380946|ref|ZP_12147832.1| Inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Johannesburg str.
S5-703]
gi|353617410|gb|EHC68401.1| Inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Johannesburg str.
S5-703]
Length = 243
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 22/100 (22%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
SA P+T+ G TN A+ L ++P L I I +MGGA+ ++G
Sbjct: 115 SAQPVTIVSTGPQTNVALLLNSHPELHTKIARIVIMGGAM-----------------ALG 157
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
N P AEFNI+ DP AA V SGIPV + LD T
Sbjct: 158 NW-----TPAAEFNIYVDPEAAEIVFQSGIPVVMAGLDVT 192
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 106/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + +K I S+ T+ V +L ++ R
Sbjct: 1 MALPIIIDCDPGHDDAIALVLALASPE--LEVKAITSSAGNQTPEKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 PDIPV------AGGAVKPLM----------------RELIIADNVHGESGLDGPALP--- 93
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
E S A Q + EL K++ ES +P +TI++ GP TN+A ++
Sbjct: 94 --EPSF---APQSGNAVELMA-------KTLRESAQP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+ I + I+GG N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHTKIARIVIMGGAMALGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHAADIERFR 206
>gi|400754017|ref|YP_006562385.1| pyrimidine-specific ribonucleoside hydrolase RihA [Phaeobacter
gallaeciensis 2.10]
gi|398653170|gb|AFO87140.1| pyrimidine-specific ribonucleoside hydrolase RihA [Phaeobacter
gallaeciensis 2.10]
Length = 313
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 31/174 (17%)
Query: 95 GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNL 154
G +T+ +G TN A P + ++ I +MGGA +GN+
Sbjct: 120 GTVTLCPLGPLTNIAAAFQKAPDIVDRVQEIVLMGGAYFE----------------VGNI 163
Query: 155 YPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEA 214
P AEFNI+ DP AA VL SG+PVT++PLD T ++ VE R +T A
Sbjct: 164 -----TPAAEFNIYVDPEAAAAVLTSGVPVTMMPLDVTHK-ALATRARVEKIRALDTKVA 217
Query: 215 QYCFQSLKM-----IRDTWSGSPPFHE----AYCMWDSFMAGVALSIMLNSSSH 259
++ + L + S P H+ AY + +G +++++ ++S
Sbjct: 218 RFTAEMLDFFERFDVEKYGSEGGPLHDPCVIAYLIRPELFSGRKINVVVETTSE 271
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 21/132 (15%)
Query: 538 DDPEL---RQPLA----VDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVI-- 588
D PEL PLA VD + PG+ +T+ GPLTN+A Q + ++
Sbjct: 90 DGPELWDPTMPLAAAHGVDFIIDTLRREAPGT-VTLCPLGPLTNIAA--AFQKAPDIVDR 146
Query: 589 -QDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
Q++ ++GG E GN+ + AEFN+++DP AA AV S + + ++PL + +
Sbjct: 147 VQEIVLMGGAY---FEVGNI-----TPAAEFNIYVDPEAAAAVLTSGVPVTMMPLDVTHK 198
Query: 648 VASFFKILHKLR 659
+ + K+R
Sbjct: 199 ALATRARVEKIR 210
>gi|300698009|ref|YP_003748670.1| putative ribonucleoside hydrolase [Ralstonia solanacearum CFBP2957]
gi|299074733|emb|CBJ54291.1| putative ribonucleoside hydrolase [Ralstonia solanacearum CFBP2957]
Length = 435
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 24/125 (19%)
Query: 76 YAPLRQPTAQQVLINAISAG---PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAI 132
+APL Q A L++ + A +TV +G TN A L+ P ++ + I +MGGA
Sbjct: 219 FAPLAQQHAVAYLVSTLRAATPHSVTVCALGPLTNLAAALIEAPDIRNGLREIVLMGGAF 278
Query: 133 RSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
F GN+ P AEFNI+ DP AA+ V SG+P+ ++P D
Sbjct: 279 ----FER------------GNI-----TPVAEFNIYVDPQAAHIVFASGVPIVVLPRDVA 317
Query: 193 KTIPV 197
P+
Sbjct: 318 VKAPI 322
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 10/101 (9%)
Query: 542 LRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQ-IIGLQNSSSVIQDVYIVGGNKGQ 600
L Q AV S + + P S +T+ GPLTNLA +I + + ++++ ++GG
Sbjct: 222 LAQQHAVAYLVSTLRAATPHS-VTVCALGPLTNLAAALIEAPDIRNGLREIVLMGG---A 277
Query: 601 DNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
E+GN+ V AEFN+++DP AA VF S + I ++P
Sbjct: 278 FFERGNITPV-----AEFNIYVDPQAAHIVFASGVPIVVLP 313
>gi|417727072|ref|ZP_12375815.1| inosine-uridine preferring nucleoside hydrolase family protein
[Shigella flexneri K-671]
gi|417732221|ref|ZP_12380891.1| inosine-uridine preferring nucleoside hydrolase family protein
[Shigella flexneri 2747-71]
gi|332761272|gb|EGJ91558.1| inosine-uridine preferring nucleoside hydrolase family protein
[Shigella flexneri 2747-71]
gi|332763348|gb|EGJ93588.1| inosine-uridine preferring nucleoside hydrolase family protein
[Shigella flexneri K-671]
Length = 260
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 30 VHGESGLDGPALPE--PTFAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 86
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 87 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 124
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 125 IVFQSGIPVVMAGLDVT 141
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 13/109 (11%)
Query: 552 KSIVESIEPGSKITILTNGPLTNLAQIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTV 610
K++ ES EP +TI++ GP TN+A ++ S I + I+GG G N
Sbjct: 59 KTLRESAEP---VTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGLGN-------- 107
Query: 611 PSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLR 659
+ AEFN+++DP AA+ VF+S + + + L + + + + R
Sbjct: 108 -WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGLDVTHKAQIHVEDTERFR 155
>gi|455641592|gb|EMF20763.1| ribonucleoside hydrolase 1 [Citrobacter freundii GTC 09479]
Length = 311
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + S P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPE--PTFAP-QDCTAVELMAKTLRESPEPMTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I+ I +MGGA+ +GN P AEFNIF DP AA
Sbjct: 138 PELHAKIDRIVIMGGAM-----------------GLGNW-----TPAAEFNIFVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 104/245 (42%), Gaps = 53/245 (21%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++FD D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILFDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPDKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAVKPLM----------------RDLIIADNVHGESGLDGPALPEPT 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A QD EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FA--------PQDCTAVELMA-------KTLRESPEP---MTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+ I + I+GG G N + AEFN+F+DP AA+ VF+S + + + L
Sbjct: 139 ELHAKIDRIVIMGGAMGLGN---------WTPAAEFNIFVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRR 647
+ +
Sbjct: 190 DVTHK 194
>gi|238911612|ref|ZP_04655449.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
Length = 311
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 60/128 (46%), Gaps = 33/128 (25%)
Query: 67 AFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEH 124
+F PQ G TA +++ + S+ P+T+ G TN A+ L ++P L I
Sbjct: 96 SFAPQSG---------TAVELMAKTLRESSQPVTIVSTGPQTNVALLLNSHPELHTKIAR 146
Query: 125 IYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPV 184
I +MGGA+ ++GN P AEFNI+ DP AA V SGIPV
Sbjct: 147 IVIMGGAM-----------------ALGNW-----TPAAEFNIYVDPEAAEIVFQSGIPV 184
Query: 185 TIIPLDAT 192
+ LD T
Sbjct: 185 VMAGLDVT 192
Score = 46.2 bits (108), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 105/257 (40%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + +K I S+ T+ V +L ++ R
Sbjct: 1 MALPIIIDCDPGHDDAIALVLALASPE--LEVKAITSSAGNQTPEKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 PDIPV------AGGAVKPLM----------------RELIIADNVHGESGLDGPALP--- 93
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
E S A Q EL K++ ES +P +TI++ GP TN+A ++
Sbjct: 94 --EPSF---APQSGTAVELMA-------KTLRESSQP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+ I + I+GG N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHTKIARIVIMGGAMALGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHAADIERFR 206
>gi|254438960|ref|ZP_05052454.1| Inosine-uridine preferring nucleoside hydrolase superfamily
[Octadecabacter antarcticus 307]
gi|198254406|gb|EDY78720.1| Inosine-uridine preferring nucleoside hydrolase superfamily
[Octadecabacter antarcticus 307]
Length = 314
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 58/126 (46%), Gaps = 24/126 (19%)
Query: 70 PQGGRKYAPLRQPTAQQVLINAISAGP---ITVFVMGSHTNFAIFLMNNPHLKKNIEHIY 126
PQ PL+ A +I+ + A P IT+ +G TN A L P +K I I
Sbjct: 92 PQLATPTMPLQDQHAVDWIIDTLRAAPEKSITLCPLGPLTNIATALQRAPDIKLAIAEIV 151
Query: 127 VMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTI 186
+MGG + GN+ P AEFNI+ DP AA V SG+P+T+
Sbjct: 152 LMGGGFFAG----------------GNI-----TPTAEFNIYVDPHAADIVFKSGLPLTV 190
Query: 187 IPLDAT 192
+PLD T
Sbjct: 191 MPLDVT 196
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 87/205 (42%), Gaps = 32/205 (15%)
Query: 453 DVVYDLLHMMGRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGL 512
D V LL + +D+ V LG G V P+ + I GF D+ G
Sbjct: 16 DAVAILLALASPEDVNV-LGVTTVAGNV-----PLDLTQKNARIICELAGFPDTLVFAGC 69
Query: 513 ARDLPRSPRRYTAENSVRFGASQDNDDPELRQPL-------AVDVWKSIVESIEPGSKIT 565
R L R TAE+ D P+L P AVD W P IT
Sbjct: 70 DRPLNRP--LVTAEH---VHGKTGLDGPQLATPTMPLQDQHAVD-WIIDTLRAAPEKSIT 123
Query: 566 ILTNGPLTNLAQIIGLQNSSSV---IQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFL 622
+ GPLTN+A LQ + + I ++ ++GG GN+ + AEFN+++
Sbjct: 124 LCPLGPLTNIAT--ALQRAPDIKLAIAEIVLMGGGF---FAGGNI-----TPTAEFNIYV 173
Query: 623 DPLAAKAVFESKLEIKLIPLHMQRR 647
DP AA VF+S L + ++PL + +
Sbjct: 174 DPHAADIVFKSGLPLTVMPLDVTHK 198
>gi|156742985|ref|YP_001433114.1| inosine/uridine-preferring nucleoside hydrolase [Roseiflexus
castenholzii DSM 13941]
gi|156234313|gb|ABU59096.1| Inosine/uridine-preferring nucleoside hydrolase [Roseiflexus
castenholzii DSM 13941]
Length = 341
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 23/125 (18%)
Query: 77 APLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
APL + ++I I G +T+ + TN AI + P + + + +MGGA+R+
Sbjct: 97 APLHRENGVDLIIREILEHPGEVTLVAVAPLTNVAIAVRKEPRIINAVREVIIMGGALRA 156
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKT 194
D GN + AEFN + DP AA+ VL SG+P+T++P D T+
Sbjct: 157 D----------------GN-----TTSLAEFNFYVDPHAAHIVLESGMPITLLPWDITQH 195
Query: 195 IPVSE 199
I +++
Sbjct: 196 IILTQ 200
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 103/247 (41%), Gaps = 54/247 (21%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M V+ D D D LA++ + P + L G+ V+S + V ++L + GR
Sbjct: 1 MTTRVILDTDPGIDDSLAILLAVASPE--VELAGVTVTSGNCPLADGVRNARNVLALAGR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV GG PL + ++ G AR P SP
Sbjct: 59 SDIPV-----------------CGGVSLPLIRPLYTAPETHGESGVGFARP-PESPAPLH 100
Query: 525 AENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS 584
EN V + + I+E PG ++T++ PLTN+A I ++
Sbjct: 101 RENGVDL------------------IIREILE--HPG-EVTLVAVAPLTNVA--IAVRKE 137
Query: 585 SSVI---QDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
+I ++V I+GG D GN ++ AEFN ++DP AA V ES + I L+P
Sbjct: 138 PRIINAVREVIIMGGALRAD---GN-----TTSLAEFNFYVDPHAAHIVLESGMPITLLP 189
Query: 642 LHMQRRV 648
+ + +
Sbjct: 190 WDITQHI 196
>gi|401762775|ref|YP_006577782.1| ribonucleoside hydrolase 1 [Enterobacter cloacae subsp. cloacae
ENHKU01]
gi|400174309|gb|AFP69158.1| ribonucleoside hydrolase 1 [Enterobacter cloacae subsp. cloacae
ENHKU01]
Length = 313
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 66/137 (48%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ G +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPELPEPG--FAP-QGCTAVELMAKVLRESAEPVTLVATGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHGKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SG+P+ + LD T
Sbjct: 176 IVFQSGLPIVMAGLDVT 192
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 106/264 (40%), Gaps = 67/264 (25%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M +P++ D D D +AL+ L P +++K + S+ T+ V +L ++ R
Sbjct: 1 MAQPIILDCDPGHDDAIALVLALASPE--LDVKAVTSSAGNQTPDKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV A G V P L R+L
Sbjct: 59 TDIPV------AGGAVKP-----------------------------LMREL------II 77
Query: 525 AENSVRFGASQDNDDPELRQP-------LAVDVWKSIV-ESIEPGSKITILTNGPLTNLA 576
A+N D PEL +P AV++ ++ ES EP +T++ GP TN+A
Sbjct: 78 ADN---VHGESGLDGPELPEPGFAPQGCTAVELMAKVLRESAEP---VTLVATGPQTNVA 131
Query: 577 QIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ I + I+GG G N + AEFN+++DP AA+ VF+S L
Sbjct: 132 LLLNSHPELHGKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGL 182
Query: 636 EIKLIPLHMQRRVASFFKILHKLR 659
I + L + R + + R
Sbjct: 183 PIVMAGLDVTHRAQIMADDIERFR 206
>gi|392939203|ref|ZP_10304847.1| Inosine-uridine nucleoside N-ribohydrolase [Thermoanaerobacter
siderophilus SR4]
gi|392290953|gb|EIV99396.1| Inosine-uridine nucleoside N-ribohydrolase [Thermoanaerobacter
siderophilus SR4]
Length = 309
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 27/189 (14%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
+ + +G TN AI L+ P +K+ ++HI +MGG+ +GN
Sbjct: 118 LEIIALGPLTNIAITLLKYPEIKEKLKHITIMGGSTE-----------------LGN--- 157
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQY 216
P AEFNI+ DP AA V SGIP+T++ L+ T ++ E N A+
Sbjct: 158 --HTPAAEFNIYVDPEAAKIVFESGIPITMVGLNVTNKAYITAKDLEEI-LSYNNRPAEL 214
Query: 217 CFQSLKMIRDTWSG----SPPFHEAYCMWDSFMAGVALSIMLNSSSHNGENACSEMEYMN 272
+SL + D + P H+ M + G+ + +L+ N ++
Sbjct: 215 VGKSLMSLVDFFKNLDFKGVPLHDPAAMATAIDEGLLETKLLHVDIETKGNITRGKTVVD 274
Query: 273 LTVVTSNEP 281
+ VT +P
Sbjct: 275 IYGVTGKKP 283
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 10/113 (8%)
Query: 564 ITILTNGPLTNLA-QIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFL 622
+ I+ GPLTN+A ++ ++ + I+GG+ E GN + AEFN+++
Sbjct: 118 LEIIALGPLTNIAITLLKYPEIKEKLKHITIMGGS----TELGN-----HTPAAEFNIYV 168
Query: 623 DPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQ 675
DP AAK VFES + I ++ L++ + K L ++ P + + L+
Sbjct: 169 DPEAAKIVFESGIPITMVGLNVTNKAYITAKDLEEILSYNNRPAELVGKSLMS 221
>gi|437835469|ref|ZP_20845289.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. SARB17]
gi|435300484|gb|ELO76572.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Enteritidis str. SARB17]
Length = 311
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 60/128 (46%), Gaps = 33/128 (25%)
Query: 67 AFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEH 124
+F PQ G TA +++ + S+ P+T+ G TN A+ L ++P L I
Sbjct: 96 SFAPQSG---------TAVELMAKTLRESSQPVTIVSTGPQTNVALLLNSHPELHTKIAR 146
Query: 125 IYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPV 184
I +MGGA+ ++GN P AEFNI+ DP AA V SGIPV
Sbjct: 147 IVIMGGAM-----------------ALGNW-----TPAAEFNIYVDPEAAEIVFQSGIPV 184
Query: 185 TIIPLDAT 192
+ LD T
Sbjct: 185 VMAGLDVT 192
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 111/271 (40%), Gaps = 53/271 (19%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + +K I S+ T+ V +L ++ R
Sbjct: 1 MALPIIIDCDPGHDDAIALVLALASPE--LEVKAITSSAGNQTPEKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 PDIPV------AGGAVKPLM----------------RELIIADNVHGESGLDGPALP--- 93
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
E S A Q EL K++ ES +P +TI++ GP TN+A ++
Sbjct: 94 --EPSF---APQSGTAVELMA-------KTLRESSQP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+ I + I+GG N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHTKIARIVIMGGAMALGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLRDRKKTPESVFSQRL 673
+ + + + RD ++ ++ L
Sbjct: 190 DVTHKAQIHAADIERFRDIGNPISTIVAELL 220
>gi|365105325|ref|ZP_09334572.1| pyrimidine-specific ribonucleoside hydrolase rihA [Citrobacter
freundii 4_7_47CFAA]
gi|363643340|gb|EHL82658.1| pyrimidine-specific ribonucleoside hydrolase rihA [Citrobacter
freundii 4_7_47CFAA]
Length = 311
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 64/137 (46%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + S P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPEPA--FAP-QDCTAMELMAKTLRESPEPMTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNIF DP AA
Sbjct: 138 PELHAKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIFVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 104/245 (42%), Gaps = 53/245 (21%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++FD D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILFDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPDKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAVKPLM----------------RDLIIADNVHGESGLDGPALPEPA 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A QD EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FA--------PQDCTAMELMA-------KTLRESPEP---MTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+ I + I+GG G N + AEFN+F+DP AA+ VF+S + + + L
Sbjct: 139 ELHAKIARIVIMGGAMGLGN---------WTPAAEFNIFVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRR 647
+ +
Sbjct: 190 DVTHK 194
>gi|403045469|ref|ZP_10900945.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus sp.
OJ82]
gi|402764290|gb|EJX18376.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus sp.
OJ82]
Length = 313
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 112/222 (50%), Gaps = 18/222 (8%)
Query: 542 LRQPLAVDVWKSIVESIE-PGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQ 600
L+QP ++ I++ ++ P K+T+L GPLT+LA+ I ++ +++Q++ + G
Sbjct: 101 LKQP----AYQDIIDKLQAPSQKVTLLFTGPLTDLAKAITVE--PTIVQNIDCLVWMGGT 154
Query: 601 DNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRD 660
+KGNV AE+N F DP A + VF++ ++I+++ L +V + + +
Sbjct: 155 FLDKGNVEEPEHDGTAEWNAFWDPEAVQIVFDTNIKIEMVALESTNQVPMTWDVRQAWAN 214
Query: 661 RKKTPESVFSQRLLQGL--MTLQQSHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKSL 718
+ P F + +T Q++ +Y FL +VL +G P L Q + + ++
Sbjct: 215 ERHYPGVDFLGVSYAAVPPLTHFQTNSTY-----FLWDVLTTAYVGM-PELVQQHSV-NV 267
Query: 719 EIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEV 760
+ ++G + GQ ++ G+ + +++ + ++ + ++
Sbjct: 268 SVHTEG--ASQGQTYIDDVNGRPISLVDHVEHDAFFKYITDL 307
Score = 46.6 bits (109), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 106/255 (41%), Gaps = 41/255 (16%)
Query: 1 MMNRDDIP-VGVGGEGGILPNGTILPDVGGYQPII----DQGMSTAG-ECRYRQAIPVGQ 54
++ DDI +GV G + I P V Q II DQ + A + R + P
Sbjct: 21 LIQMDDIELIGVSAIGA---DSYIEPAVSASQKIINRFSDQPIHVAASKERGKHPFPKDW 77
Query: 55 RLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISA--GPITVFVMGSHTNFAIFL 112
R++ L L + +++ L + A Q +I+ + A +T+ G T+ A +
Sbjct: 78 RMHAFFMDAL--PILNEPSNQHSLLLKQPAYQDIIDKLQAPSQKVTLLFTGPLTDLAKAI 135
Query: 113 MNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPF 172
P + +NI+ + MGG GN+ + + AE+N F DP
Sbjct: 136 TVEPTIVQNIDCLVWMGGTFLDK----------------GNVEEPEHDGTAEWNAFWDPE 179
Query: 173 AAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSP 232
A V + I + ++ L++T +P++ ++ RQ + + + + + +++ P
Sbjct: 180 AVQIVFDTNIKIEMVALESTNQVPMT------WDVRQ-AWANERHYPGVDFLGVSYAAVP 232
Query: 233 PF-----HEAYCMWD 242
P + Y +WD
Sbjct: 233 PLTHFQTNSTYFLWD 247
>gi|290509312|ref|ZP_06548683.1| pyrimidine-specific ribonucleoside hydrolase rihA [Klebsiella sp.
1_1_55]
gi|289778706|gb|EFD86703.1| pyrimidine-specific ribonucleoside hydrolase rihA [Klebsiella sp.
1_1_55]
Length = 311
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 64/137 (46%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + S P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPSLPE--PTFAP-QNCTAVELMARVLRESQEPVTLVATGPQTNVALLLASH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNIF DP AA
Sbjct: 138 PELHAKIARIVIMGGAM-----------------GLGNW-----QPAAEFNIFVDPQAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 MVFQSGIPVVMAGLDVT 192
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 110/287 (38%), Gaps = 68/287 (23%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + +K + S+ T+ V +L ++ R
Sbjct: 1 MALPMMIDCDPGHDDAIALVLALASPE--LEVKAVTASAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV A G P L RDL
Sbjct: 59 PDIPV------AGGAWKP-----------------------------LMRDL------II 77
Query: 525 AENSVRFGASQDNDDPELRQPL-------AVDVWKSIV-ESIEPGSKITILTNGPLTNLA 576
A+N D P L +P AV++ ++ ES EP +T++ GP TN+A
Sbjct: 78 ADN---VHGESGLDGPSLPEPTFAPQNCTAVELMARVLRESQEP---VTLVATGPQTNVA 131
Query: 577 QIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ + I + I+GG G N + AEFN+F+DP AA+ VF+S +
Sbjct: 132 LLLASHPELHAKIARIVIMGGAMGLGNWQ---------PAAEFNIFVDPQAAEMVFQSGI 182
Query: 636 EIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQ 682
+ + L + + + + R + P S LL M +
Sbjct: 183 PVVMAGLDVTHKAQILPADIERFR-QIGNPVSTIVAELLDFFMAYHK 228
>gi|269139981|ref|YP_003296682.1| ribonucleoside hydrolase 1 [Edwardsiella tarda EIB202]
gi|387868501|ref|YP_005699970.1| Inosine-uridine preferring nucleoside hydrolase [Edwardsiella tarda
FL6-60]
gi|267985642|gb|ACY85471.1| ribonucleoside hydrolase 1 [Edwardsiella tarda EIB202]
gi|304559814|gb|ADM42478.1| Inosine-uridine preferring nucleoside hydrolase [Edwardsiella tarda
FL6-60]
Length = 321
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 63/138 (45%), Gaps = 29/138 (21%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI---SAGPITVFVMGSHTNFAIFLMN 114
V+ GL LP+ +AP QP L+ + +A P+T+ G TN A+ L
Sbjct: 81 VHGESGLDGPRLPEP--DFAP--QPCGALALMAQVLRDAAQPVTLVATGPLTNVALLLAA 136
Query: 115 NPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAA 174
+P LK IE I +MGG+ + GN P AEFNI+ DP AA
Sbjct: 137 HPELKPRIERIVIMGGSAGA-----------------GNW-----TPAAEFNIYVDPEAA 174
Query: 175 YTVLHSGIPVTIIPLDAT 192
V SG+P+ + LD T
Sbjct: 175 EMVFQSGLPIVMAGLDVT 192
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 111/258 (43%), Gaps = 53/258 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +ALI L P + ++ + S+ T+ +L ++ R
Sbjct: 1 MALPLIIDCDPGHDDAIALILALASPE--LEVRAVTTSAGNQTPEKTLRNALRILTLLRR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV G A PL + +D+++G + D PR P
Sbjct: 59 GDIPVAGG---------------------AAKPLMRD-LIIADSVHGESGLDGPRLP--- 93
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
+ + P+ LA+ + + + ++ +P +T++ GPLTN+A ++
Sbjct: 94 -----------EPDFAPQPCGALAL-MAQVLRDAAQP---VTLVATGPLTNVALLLAAHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
I+ + I+GG+ G N + AEFN+++DP AA+ VF+S L I + L
Sbjct: 139 ELKPRIERIVIMGGSAGAGN---------WTPAAEFNIYVDPEAAEMVFQSGLPIVMAGL 189
Query: 643 HMQRRVASFFKILHKLRD 660
+ R + +LRD
Sbjct: 190 DVTHRAQILDADIERLRD 207
>gi|378581487|ref|ZP_09830134.1| inosine-uridine preferring nucleoside hydrolase [Pantoea stewartii
subsp. stewartii DC283]
gi|377815994|gb|EHT99102.1| inosine-uridine preferring nucleoside hydrolase [Pantoea stewartii
subsp. stewartii DC283]
Length = 307
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 20/121 (16%)
Query: 82 PTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNS 139
P A Q +I+++ A P IT+ +G TN A + P + ++ + +MGGA +D +
Sbjct: 96 PGAVQFIIDSVRANPGVITLVAIGPLTNIASAINQAPDIIPLVKELVIMGGAFGTDGHS- 154
Query: 140 TNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSE 199
GN+ P++EFNI+ DP AA VL S +P+ +IPLD T + ++
Sbjct: 155 ------------GNV-----TPFSEFNIWKDPHAADQVLSSALPIILIPLDVTHKVLINS 197
Query: 200 N 200
+
Sbjct: 198 D 198
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 80/154 (51%), Gaps = 24/154 (15%)
Query: 504 LDSDTLYGLARDL---PRSPRRYTAENSVRFGASQDN---DDPELRQPLAVDVWKSIVES 557
+D G AR L P +P R E+ + G + DN DD P AV + I++S
Sbjct: 55 IDVPVYRGCARPLAREPSAPARLHGEDGL--GDAFDNPFSDD----APGAV---QFIIDS 105
Query: 558 IE--PGSKITILTNGPLTNLAQIIG-LQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSK 614
+ PG IT++ GPLTN+A I + +++++ I+GG G D GNV +
Sbjct: 106 VRANPGV-ITLVAIGPLTNIASAINQAPDIIPLVKELVIMGGAFGTDGHSGNV-----TP 159
Query: 615 YAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
++EFN++ DP AA V S L I LIPL + +V
Sbjct: 160 FSEFNIWKDPHAADQVLSSALPIILIPLDVTHKV 193
>gi|206579354|ref|YP_002238271.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae 342]
gi|226739279|sp|B5XWV7.1|RIHA_KLEP3 RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|206568412|gb|ACI10188.1| pyrimidine-specific ribonucleoside hydrolase RihA [Klebsiella
pneumoniae 342]
Length = 311
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 64/137 (46%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + S P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPSLPE--PTFAP-QNCTAVELMARVLRESQEPVTLVATGPQTNVALLLASH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNIF DP AA
Sbjct: 138 PELHAKIARIVIMGGAM-----------------GLGNW-----QPAAEFNIFVDPQAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 MVFQSGIPVVMAGLDVT 192
Score = 46.2 bits (108), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 110/287 (38%), Gaps = 68/287 (23%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P + +K + S+ T+ V +L ++ R
Sbjct: 1 MALPMMIDCDPGHDDAIAMVLALASPE--LEVKAVTASAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV A G P L RDL
Sbjct: 59 PDIPV------AGGAWKP-----------------------------LMRDL------II 77
Query: 525 AENSVRFGASQDNDDPELRQPL-------AVDVWKSIV-ESIEPGSKITILTNGPLTNLA 576
A+N D P L +P AV++ ++ ES EP +T++ GP TN+A
Sbjct: 78 ADN---VHGESGLDGPSLPEPTFAPQNCTAVELMARVLRESQEP---VTLVATGPQTNVA 131
Query: 577 QIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ + I + I+GG G N + AEFN+F+DP AA+ VF+S +
Sbjct: 132 LLLASHPELHAKIARIVIMGGAMGLGNWQ---------PAAEFNIFVDPQAAEMVFQSGI 182
Query: 636 EIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQ 682
+ + L + + + + R + P S LL M +
Sbjct: 183 PVVMAGLDVTHKAQILPADIERFR-QIGNPVSTIVAELLDFFMAYHK 228
>gi|319781477|ref|YP_004140953.1| ribosylpyrimidine nucleosidase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317167365|gb|ADV10903.1| Ribosylpyrimidine nucleosidase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 314
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 21/100 (21%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
+G IT+ +G TN A+ L+ P + I+ I +MGG F N +
Sbjct: 118 ESGTITLCALGPLTNIALALIREPRIAPRIKEIVLMGGGF----FEGGNVT--------- 164
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
P AEFNI+ DP AA VL SGIP+ ++PLD T
Sbjct: 165 --------PTAEFNIYVDPQAADVVLKSGIPIVMMPLDVT 196
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 10/120 (8%)
Query: 541 ELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLA-QIIGLQNSSSVIQDVYIVGGNKG 599
+L+ AVD + S E G+ IT+ GPLTN+A +I + I+++ ++GG
Sbjct: 100 KLQDQYAVDFVVETLMSEESGT-ITLCALGPLTNIALALIREPRIAPRIKEIVLMGGGF- 157
Query: 600 QDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLR 659
E GNV + AEFN+++DP AA V +S + I ++PL + + + K R
Sbjct: 158 --FEGGNV-----TPTAEFNIYVDPQAADVVLKSGIPIVMMPLDVTHKALTTAKRTQAFR 210
>gi|288935259|ref|YP_003439318.1| ribosylpyrimidine nucleosidase [Klebsiella variicola At-22]
gi|288889968|gb|ADC58286.1| Ribosylpyrimidine nucleosidase [Klebsiella variicola At-22]
Length = 311
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 64/137 (46%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + S P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPSLPEP--TFAP-QNCTAVELMARVLRESQEPVTLVATGPQTNVALLLASH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNIF DP AA
Sbjct: 138 PELHAKIARIVIMGGAM-----------------GLGNW-----QPAAEFNIFVDPQAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 MVFQSGIPVVMAGLDVT 192
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 110/287 (38%), Gaps = 68/287 (23%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + +K + S+ T+ V +L ++ R
Sbjct: 1 MALPMIIDCDPGHDDAIALVLALASPE--LEVKAVTASAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV A G P L RDL
Sbjct: 59 PDIPV------AGGAWKP-----------------------------LMRDL------II 77
Query: 525 AENSVRFGASQDNDDPELRQPL-------AVDVWKSIV-ESIEPGSKITILTNGPLTNLA 576
A+N D P L +P AV++ ++ ES EP +T++ GP TN+A
Sbjct: 78 ADN---VHGESGLDGPSLPEPTFAPQNCTAVELMARVLRESQEP---VTLVATGPQTNVA 131
Query: 577 QIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ + I + I+GG G N + AEFN+F+DP AA+ VF+S +
Sbjct: 132 LLLASHPELHAKIARIVIMGGAMGLGNWQ---------PAAEFNIFVDPQAAEMVFQSGI 182
Query: 636 EIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQ 682
+ + L + R + + R + P S LL M +
Sbjct: 183 PVVMAGLDVTHRAQILLADIERFR-QIGNPVSTIVAELLDFFMAYHK 228
>gi|166032146|ref|ZP_02234975.1| hypothetical protein DORFOR_01849 [Dorea formicigenerans ATCC
27755]
gi|166027869|gb|EDR46626.1| Inosine-uridine preferring nucleoside hydrolase [Dorea
formicigenerans ATCC 27755]
Length = 317
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 78/178 (43%), Gaps = 37/178 (20%)
Query: 70 PQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYV 127
P+ AP+++ +A + + + S PI + G TN A ++ PHL + I+ I +
Sbjct: 91 PELPEPVAPMQEMSAVEFMAQQLEKSDTPIVIVPTGPLTNVATLILCYPHLIEKIDKIVL 150
Query: 128 MGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTII 187
MGG+I S C S EFNI DP+AA V SGIP+ ++
Sbjct: 151 MGGSIVSGCSGRGAS---------------------EFNIMVDPYAADIVYTSGIPIVMM 189
Query: 188 PLDATKTIPVSENFFVEFERRQNTYE--------AQYCFQSLKMIRDTWSGSPPFHEA 237
LD T + F E E+ + T + A + + +MI W G P H+A
Sbjct: 190 GLDVTNYTTIG---FDEKEKFRETGQVGTLIADFADFFGRGFEMI--GWCGV-PVHDA 241
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 95/259 (36%), Gaps = 60/259 (23%)
Query: 408 PVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDI 467
PV+ D D D +A+I L L E +N+ GI + T + +GR DI
Sbjct: 5 PVLMDCDPGHDDAMAII--LALSSEKLNVLGITSACGNQTIEKTTKNARSVCEFLGRRDI 62
Query: 468 PVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAEN 527
P+ A G P PI Y I G G
Sbjct: 63 PI------AQGRKAPLLTPI----YTAGIAHGDSGI------------------------ 88
Query: 528 SVRFGASQDNDDPELRQPLAVDVWKSIVESI-----EPGSKITILTNGPLTNLAQ-IIGL 581
D PEL +P+A S VE + + + I I+ GPLTN+A I+
Sbjct: 89 ----------DGPELPEPVAPMQEMSAVEFMAQQLEKSDTPIVIVPTGPLTNVATLILCY 138
Query: 582 QNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
+ I + ++GG+ V +EFN+ +DP AA V+ S + I ++
Sbjct: 139 PHLIEKIDKIVLMGGSI--------VSGCSGRGASEFNIMVDPYAADIVYTSGIPIVMMG 190
Query: 642 LHMQRRVASFFKILHKLRD 660
L + F K R+
Sbjct: 191 LDVTNYTTIGFDEKEKFRE 209
>gi|261364483|ref|ZP_05977366.1| cytidine/uridine-specific hydrolase [Neisseria mucosa ATCC 25996]
gi|288567414|gb|EFC88974.1| cytidine/uridine-specific hydrolase [Neisseria mucosa ATCC 25996]
Length = 319
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 62/137 (45%), Gaps = 24/137 (17%)
Query: 77 APLRQPTAQQVLINAISAG---PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIR 133
PL++ A L+ +S IT+ +G TN A+ L P + I+ I +MGG
Sbjct: 104 CPLQKQHAVAYLVETLSRAEDASITLCPIGPLTNIALALSIAPEAVRAIKRIVLMGG--- 160
Query: 134 SDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
+ F + N + P AEFN F+DP AA VL SG P+T++PLD T
Sbjct: 161 -NYFEAGNMT-----------------PAAEFNFFTDPHAAQIVLQSGAPITVLPLDVTH 202
Query: 194 TIPVSENFFVEFERRQN 210
++ R +N
Sbjct: 203 KAQITSERMNRLRRLKN 219
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 9/102 (8%)
Query: 562 SKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNM 620
+ IT+ GPLTN+A + + + I+ + ++GGN E GN+ + AEFN
Sbjct: 125 ASITLCPIGPLTNIALALSIAPEAVRAIKRIVLMGGNY---FEAGNM-----TPAAEFNF 176
Query: 621 FLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRK 662
F DP AA+ V +S I ++PL + + + +++LR K
Sbjct: 177 FTDPHAAQIVLQSGAPITVLPLDVTHKAQITSERMNRLRRLK 218
>gi|269104882|ref|ZP_06157578.1| inosine-uridine preferring nucleoside hydrolase [Photobacterium
damselae subsp. damselae CIP 102761]
gi|268161522|gb|EEZ40019.1| inosine-uridine preferring nucleoside hydrolase [Photobacterium
damselae subsp. damselae CIP 102761]
Length = 325
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 67/115 (58%), Gaps = 11/115 (9%)
Query: 551 WKSIVESIEPG-SKITILTNGPLTNLAQII-GLQNSSSVIQDVYIVGGNKGQDNEKGNVF 608
++ I+ESI +IT++ GPLTNLA I + +S++++V I+GG G ++ +GNV
Sbjct: 106 YQYIIESIRANPQEITLVAVGPLTNLAMAIQAAPDIASLVKEVVIMGGAFGVNDHRGNV- 164
Query: 609 TVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFF--KILHKLRDR 661
+ YAE N+ DP AA VF + +K+I L + SFF + L +LRD
Sbjct: 165 ----TPYAEANIHDDPHAADIVFSASWPVKIIGLDVTEE--SFFSGQYLDQLRDH 213
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 69/154 (44%), Gaps = 27/154 (17%)
Query: 51 PVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNF 108
PVG V+ GL P+ K LR A Q +I +I A P IT+ +G TN
Sbjct: 74 PVGPTEIVHGKTGLGDFHAPELIDKAIDLR--PAYQYIIESIRANPQEITLVAVGPLTNL 131
Query: 109 AIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIF 168
A+ + P + ++ + +MGGA + D GN+ PYAE NI
Sbjct: 132 AMAIQAAPDIASLVKEVVIMGGAFGVN-------------DHRGNV-----TPYAEANIH 173
Query: 169 SDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFF 202
DP AA V + PV II LD T+ E+FF
Sbjct: 174 DDPHAADIVFSASWPVKIIGLDVTE-----ESFF 202
>gi|114764313|ref|ZP_01443541.1| inosine-uridine preferring nucleoside hydrolase [Pelagibaca
bermudensis HTCC2601]
gi|114543261|gb|EAU46278.1| inosine-uridine preferring nucleoside hydrolase [Roseovarius sp.
HTCC2601]
Length = 312
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 83/202 (41%), Gaps = 52/202 (25%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP---ITVFVMGSHTNFAIFLM 113
+V+ GL LP PL++ +I + A P +T+ +G TN A
Sbjct: 81 HVHGKTGLDGPDLPD---PTMPLQEQHGVDFIIETLRAEPEGTVTLCPLGPLTNIATAFQ 137
Query: 114 NNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFA 173
P + ++ I +MGGA +GN+ P AEFNI+ DP A
Sbjct: 138 RAPEIAARVKEIVLMGGAYFE----------------VGNI-----TPAAEFNIYVDPEA 176
Query: 174 AYTVLHSGIPVTIIPLDATK----TIPVSE-----------------NFFVEFERRQNTY 212
A V SG+P+T++PLDAT T P +E +FF F+R +
Sbjct: 177 AELVFRSGVPITVLPLDATHKALVTPPRNEAFRALGTKVGVAVAEMTDFFERFDREKYGS 236
Query: 213 EA----QYCFQSLKMIRDTWSG 230
+ C + + RD +SG
Sbjct: 237 DGAPLHDPCVTAYLLNRDLFSG 258
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 55/99 (55%), Gaps = 15/99 (15%)
Query: 554 IVESI--EPGSKITILTNGPLTNLAQIIGLQNSSSV---IQDVYIVGGNKGQDNEKGNVF 608
I+E++ EP +T+ GPLTN+A Q + + ++++ ++GG E GN+
Sbjct: 109 IIETLRAEPEGTVTLCPLGPLTNIAT--AFQRAPEIAARVKEIVLMGGAY---FEVGNI- 162
Query: 609 TVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
+ AEFN+++DP AA+ VF S + I ++PL +
Sbjct: 163 ----TPAAEFNIYVDPEAAELVFRSGVPITVLPLDATHK 197
>gi|429219860|ref|YP_007181504.1| inosine-uridine nucleoside N-ribohydrolase [Deinococcus
peraridilitoris DSM 19664]
gi|429130723|gb|AFZ67738.1| Inosine-uridine nucleoside N-ribohydrolase [Deinococcus
peraridilitoris DSM 19664]
Length = 312
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 28/134 (20%)
Query: 72 GGRKYAPLRQPT----AQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHI 125
G K P R+ A Q +I+A+ P +T+ G TN A+ L + +++ +
Sbjct: 90 GDVKLPPCRRAAESGHAAQFMIDAVCGRPGEVTLVATGPLTNLALALRLDERFARDVREV 149
Query: 126 YVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVT 185
+MGG+ +D N++ P AEFN F+DP AA V SG+ +T
Sbjct: 150 VLMGGS--ADWGNAS--------------------PAAEFNFFADPHAARVVFESGVKIT 187
Query: 186 IIPLDATKTIPVSE 199
+ L+A++ +PV E
Sbjct: 188 MFGLNASRQVPVDE 201
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 11/116 (9%)
Query: 559 EPGSKITILTNGPLTNLAQIIGL-QNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAE 617
PG ++T++ GPLTNLA + L + + +++V ++GG+ N +S AE
Sbjct: 117 RPG-EVTLVATGPLTNLALALRLDERFARDVREVVLMGGSADWGN---------ASPAAE 166
Query: 618 FNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRL 673
FN F DP AA+ VFES ++I + L+ R+V + +L+D V S+ L
Sbjct: 167 FNFFADPHAARVVFESGVKITMFGLNASRQVPVDEARVQQLQDVNSNAGRVASRFL 222
>gi|409730233|ref|ZP_11271819.1| ribonucleoside hydrolase 1 [Halococcus hamelinensis 100A6]
gi|448723596|ref|ZP_21706113.1| ribonucleoside hydrolase 1 [Halococcus hamelinensis 100A6]
gi|445787432|gb|EMA38176.1| ribonucleoside hydrolase 1 [Halococcus hamelinensis 100A6]
Length = 312
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 98/249 (39%), Gaps = 50/249 (20%)
Query: 22 TILPDVGGYQPIIDQGMSTAGECRY-----RQAIPVGQRL------------YVNTNYGL 64
T + V G Q I +T CR R +PV + + +V+ GL
Sbjct: 30 TAVTTVAGNQTI---EKTTRNACRVLTLADRTDVPVARGMGAPLVRDQVTAGWVHGESGL 86
Query: 65 RKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEH 124
A LP+ G + P+ + + ++ A +G + + +G TN A+ L +P + +IE
Sbjct: 87 DGADLPEPGTE--PIERHAVETIVETAAESGALHIGPVGPLTNVAVALRKHPDVVDDIER 144
Query: 125 IYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPV 184
I +MGG GN+ P AEFN+F+DP AA V + + V
Sbjct: 145 IVLMGGTTGD-----------------GNV-----TPAAEFNVFADPEAAKVVFEADVDV 182
Query: 185 TIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGS-----PPFHEAYC 239
T++ L+ T+ + + R NT L D S P H+A
Sbjct: 183 TMVGLNVTRKARLDRDHVTRI-RELNTEVTTVVADLLTYFLDVHEASFERDGVPIHDACA 241
Query: 240 MWDSFMAGV 248
+ + G+
Sbjct: 242 VAEVVDPGI 250
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 14/107 (13%)
Query: 544 QPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDV---YIVGGNKGQ 600
+P+ ++IVE+ + I GPLTN+A + L+ V+ D+ ++GG G
Sbjct: 97 EPIERHAVETIVETAAESGALHIGPVGPLTNVA--VALRKHPDVVDDIERIVLMGGTTGD 154
Query: 601 DNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
GNV + AEFN+F DP AAK VFE+ +++ ++ L++ R+
Sbjct: 155 ----GNV-----TPAAEFNVFADPEAAKVVFEADVDVTMVGLNVTRK 192
>gi|416845476|ref|ZP_11905975.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus aureus O46]
gi|323443391|gb|EGB01007.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus aureus O46]
Length = 305
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 73/173 (42%), Gaps = 34/173 (19%)
Query: 78 PLRQPTA---QQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAI 132
P RQ A V+IN + S P+T+ G TN A L+ P + ++IE I +MGG
Sbjct: 91 PSRQAVAMPASDVIINKVMTSDTPVTIVATGPLTNVATALIREPRIAEHIESITLMGGG- 149
Query: 133 RSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
+ GN P AEFNI+ D AA V SGI + + LD T
Sbjct: 150 -----------------TFGNW-----TPTAEFNIWVDAEAAKRVFESGITINVFGLDLT 187
Query: 193 KTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWS-----GSPPFHEAYCM 240
+ E+ FE N AQ+ + L+ + T+ P H+A +
Sbjct: 188 HQVLADEHVIERFESINNPV-AQFVVELLQFFKKTYKTHFNMDGGPIHDACTI 239
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 543 RQPLAVDVWKSIVESI-EPGSKITILTNGPLTNLAQ-IIGLQNSSSVIQDVYIVGGNKGQ 600
RQ +A+ I+ + + +TI+ GPLTN+A +I + I+ + ++GG
Sbjct: 93 RQAVAMPASDVIINKVMTSDTPVTIVATGPLTNVATALIREPRIAEHIESITLMGGGT-- 150
Query: 601 DNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRD 660
GN + AEFN+++D AAK VFES + I + L + +V + ++ + +
Sbjct: 151 ---FGN-----WTPTAEFNIWVDAEAAKRVFESGITINVFGLDLTHQVLADEHVIERF-E 201
Query: 661 RKKTPESVFSQRLLQGLMTLQQSH 684
P + F LLQ ++H
Sbjct: 202 SINNPVAQFVVELLQFFKKTYKTH 225
>gi|419915300|ref|ZP_14433666.1| ribonucleoside hydrolase 1 [Escherichia coli KD1]
gi|425298816|ref|ZP_18688866.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
07798]
gi|432552618|ref|ZP_19789349.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE47]
gi|388384092|gb|EIL45834.1| ribonucleoside hydrolase 1 [Escherichia coli KD1]
gi|408221819|gb|EKI45752.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
07798]
gi|431086903|gb|ELD92919.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE47]
Length = 311
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 78/194 (40%), Gaps = 58/194 (29%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQRLYVNT 60
++NR DIPV G ++ N I +V G
Sbjct: 55 LLNRTDIPVASGAVKPLMRNLIIADNVHG------------------------------- 83
Query: 61 NYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHL 118
GL LP+ +AP + TA +++ + S P+T+ G TN A+ L ++P L
Sbjct: 84 ESGLDGPALPEPA--FAP-QNCTAVELMAKTLCESEEPVTIVSTGPQTNVALLLNSHPEL 140
Query: 119 KKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVL 178
I I +MGGA+ +GN P AEFNI+ DP AA V
Sbjct: 141 HSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAEIVF 178
Query: 179 HSGIPVTIIPLDAT 192
SGIPV + LD T
Sbjct: 179 QSGIPVVMAGLDVT 192
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 106/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 TDIPV------ASGAVKPLM----------------RNLIIADNVHGESGLDGPALPEPA 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVELMA-------KTLCESEEP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHVEDTERFR 206
>gi|237707382|ref|ZP_04537863.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia sp.
3_2_53FAA]
gi|26107024|gb|AAN79208.1|AE016757_112 Hypothetical protein ybeK [Escherichia coli CFT073]
gi|91071266|gb|ABE06147.1| hypothetical protein YbeK [Escherichia coli UTI89]
gi|226898592|gb|EEH84851.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia sp.
3_2_53FAA]
Length = 322
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 78/194 (40%), Gaps = 58/194 (29%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQRLYVNT 60
++NR DIPV G ++ N I +V G
Sbjct: 66 LLNRTDIPVASGAVKPLMRNLIIADNVHG------------------------------- 94
Query: 61 NYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHL 118
GL LP+ +AP + TA +++ + S P+T+ G TN A+ L ++P L
Sbjct: 95 ESGLDGPALPE--PTFAP-QNCTAVELMAKTLRESEEPVTIVSTGPQTNVALLLNSHPEL 151
Query: 119 KKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVL 178
I I +MGGA+ +GN P AEFNI+ DP AA V
Sbjct: 152 HSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAEIVF 189
Query: 179 HSGIPVTIIPLDAT 192
SGIPV + LD T
Sbjct: 190 QSGIPVVMAGLDVT 203
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 106/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 12 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 69
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 70 TDIPV------ASGAVKPLM----------------RNLIIADNVHGESGLDGPALPEPT 107
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 108 FA--------PQNCTAVELMA-------KTLRESEEP---VTIVSTGPQTNVALLLNSHP 149
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 150 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 200
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 201 DVTHKAQIHVEDTERFR 217
>gi|423197476|ref|ZP_17184059.1| hypothetical protein HMPREF1171_02091 [Aeromonas hydrophila SSU]
gi|404631164|gb|EKB27800.1| hypothetical protein HMPREF1171_02091 [Aeromonas hydrophila SSU]
Length = 322
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 71/122 (58%), Gaps = 17/122 (13%)
Query: 551 WKSIVESIE--PGSKITILTNGPLTNLAQIIGLQNS---SSVIQDVYIVGGNKGQDNEKG 605
W+ IVE+++ PG +IT++T GPLTNLA + LQ + + +++ V ++GG G + +G
Sbjct: 105 WQYIVEAVKAAPG-EITLVTIGPLTNLA--LALQAAPEIAGLVKQVVVMGGAFGVNGHRG 161
Query: 606 NVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFK--ILHKLRDRKK 663
NV + YAE N+ DP AA VF ++ + +I L + ++ SFF L LRD
Sbjct: 162 NV-----TPYAEANIHDDPDAADRVFTARWPVVIIGLDVTQQ--SFFSSAYLDALRDDAG 214
Query: 664 TP 665
P
Sbjct: 215 EP 216
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 69/154 (44%), Gaps = 28/154 (18%)
Query: 51 PVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNF 108
PVG V+ G + G AP +P A Q ++ A+ A P IT+ +G TN
Sbjct: 74 PVGPTTVVHGPSGFGD--VTAGEVTLAPDPRP-AWQYIVEAVKAAPGEITLVTIGPLTNL 130
Query: 109 AIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIF 168
A+ L P + ++ + VMGGA N + GN+ PYAE NI
Sbjct: 131 ALALQAAPEIAGLVKQVVVMGGAF------GVNGHR-------GNV-----TPYAEANIH 172
Query: 169 SDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFF 202
DP AA V + PV II LD T+ ++FF
Sbjct: 173 DDPDAADRVFTARWPVVIIGLDVTQ-----QSFF 201
>gi|417507021|ref|ZP_12174418.1| Inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Senftenberg str.
A4-543]
gi|353650382|gb|EHC92762.1| Inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Senftenberg str.
A4-543]
Length = 263
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + S+ P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPE--PSFAP-QSGTAVELMAKTLRESSQPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHTKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 107/265 (40%), Gaps = 67/265 (25%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + +K I S+ T+ V +L ++ R
Sbjct: 1 MALPIIIDCDPGHDDAIALVLALASPE--LEVKAITSSAGNQTPEKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV A G V P L R+L
Sbjct: 59 PDIPV------AGGAVKP-----------------------------LMREL------II 77
Query: 525 AENSVRFGASQDNDDPELRQP-------LAVDVW-KSIVESIEPGSKITILTNGPLTNLA 576
A+N D P L +P AV++ K++ ES +P +TI++ GP TN+A
Sbjct: 78 ADN---VHGESGLDGPALPEPSFAPQSGTAVELMAKTLRESSQP---VTIVSTGPQTNVA 131
Query: 577 QIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ + I + I+GG G N + AEFN+++DP AA+ VF+S +
Sbjct: 132 LLLNSHPELHTKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGI 182
Query: 636 EIKLIPLHMQRRVASFFKILHKLRD 660
+ + L + + + + RD
Sbjct: 183 PVVMAGLDVTHKAQIHAADIERFRD 207
>gi|417894819|ref|ZP_12538826.1| cytidine/uridine-specific hydrolase [Staphylococcus aureus subsp.
aureus 21235]
gi|341842120|gb|EGS83552.1| cytidine/uridine-specific hydrolase [Staphylococcus aureus subsp.
aureus 21235]
Length = 311
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 73/173 (42%), Gaps = 34/173 (19%)
Query: 78 PLRQPTA---QQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAI 132
P RQ A V+IN + S P+TV G TN A L+ P + ++IE I +MGG
Sbjct: 97 PSRQAVAMPASDVIINKVMTSDTPVTVVATGPLTNVATALIREPRIAEHIESITLMGGG- 155
Query: 133 RSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
+ GN P AEFNI+ D AA V SGI + + LD T
Sbjct: 156 -----------------TFGNW-----TPTAEFNIWVDAEAAKRVFESGITINVFGLDVT 193
Query: 193 KTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWS-----GSPPFHEAYCM 240
+ ++ FE N AQ+ + L+ + T+ P H+A +
Sbjct: 194 HQVLADDHVIERFESINNPV-AQFVVELLQFFKKTYKTHFNMDGGPIHDACTI 245
Score = 45.8 bits (107), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 114/283 (40%), Gaps = 55/283 (19%)
Query: 405 MGKPVVFDIDMSAGDFLALIYL--LKLPVELINLKGILVSSTGWATSATVDVVYDLLHMM 462
M + ++ D D D +ALI + P+E++ + + + + ++L +M
Sbjct: 1 MKRKIIMDCDPGHDDAIALILAGAIDSPLEILAVTTV---AGNQSVDKNTTNALNVLDIM 57
Query: 463 GRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRR 522
GR DI V G P I +A I SG LD LP +P R
Sbjct: 58 GRQDIAVAKG---------ADRPLIKPAAFASEIHGESG--LD-------GPKLPSTPSR 99
Query: 523 YTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQ-IIGL 581
+ P + + ++ S P +T++ GPLTN+A +I
Sbjct: 100 QA-----------------VAMPASDVIINKVMTSDTP---VTVVATGPLTNVATALIRE 139
Query: 582 QNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
+ I+ + ++GG GN + AEFN+++D AAK VFES + I +
Sbjct: 140 PRIAEHIESITLMGGGTF-----GN-----WTPTAEFNIWVDAEAAKRVFESGITINVFG 189
Query: 642 LHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSH 684
L + +V + ++ + + P + F LLQ ++H
Sbjct: 190 LDVTHQVLADDHVIERF-ESINNPVAQFVVELLQFFKKTYKTH 231
>gi|116493168|ref|YP_804903.1| inosine-uridine nucleoside N-ribohydrolase [Pediococcus pentosaceus
ATCC 25745]
gi|116103318|gb|ABJ68461.1| Inosine-uridine nucleoside N-ribohydrolase [Pediococcus pentosaceus
ATCC 25745]
Length = 316
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 114/233 (48%), Gaps = 29/233 (12%)
Query: 536 DNDDPELR---QPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS-SSVIQDV 591
+N+ P+ + QP +D+ + I S + K+T++ GPLT+LA+ I + + I ++
Sbjct: 97 NNNQPKTKLASQPAHLDMLEKIKASQQ---KVTLIMTGPLTDLARAIEIDPTIVDNIDEL 153
Query: 592 YIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASF 651
+ +GG+ N GNV AE+N + DP A + VF++ L+I ++ L +V
Sbjct: 154 FWMGGSM---NGVGNVAEPEHDGTAEWNAYWDPQAVETVFDTDLKITIVSLDSTNQVP-- 208
Query: 652 FKILHKLRDRKKTPESVFSQRLLQGLMTLQQSH---HSYHHVDT-FLGEVLGAVILGGNP 707
+ LR R QR L + Q + HS+ T +L +VL ++ P
Sbjct: 209 --LTKALRIRWA------KQRQFPALDLIGQGYSLVHSFEANSTYYLWDVL-TTLVSKYP 259
Query: 708 HLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEV 760
L + IK+ +I+DG G+ V + G+ + + +N A+++D F E+
Sbjct: 260 ELVDSKPIKA-AVITDG--PSAGKTFVT-DNGRPLTFVTQVNSALFFDKFDEL 308
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 107/253 (42%), Gaps = 38/253 (15%)
Query: 9 VGVGGEGGILPNGTILPDVGGYQPIIDQ-GMSTAGECRYRQAIPVGQ-----RL--YVNT 60
+GVG G + + P V + IID G T E + PV Q RL +
Sbjct: 30 IGVGAVGA---DSYVEPAVSASRKIIDLFGQDTTLEVAKSNSRPVNQFPKEWRLSAFSFD 86
Query: 61 NYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAG--PITVFVMGSHTNFAIFLMNNPHL 118
++ + L + L A ++ I A +T+ + G T+ A + +P +
Sbjct: 87 DFPILNEHLDNNNQPKTKLASQPAHLDMLEKIKASQQKVTLIMTGPLTDLARAIEIDPTI 146
Query: 119 KKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVL 178
NI+ ++ MGG++ + +GN+ + + AE+N + DP A TV
Sbjct: 147 VDNIDELFWMGGSM----------------NGVGNVAEPEHDGTAEWNAYWDPQAVETVF 190
Query: 179 HSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPF--HE 236
+ + +TI+ LD+T +P+++ + + + Q F +L +I +S F +
Sbjct: 191 DTDLKITIVSLDSTNQVPLTKALRIRWAK-------QRQFPALDLIGQGYSLVHSFEANS 243
Query: 237 AYCMWDSFMAGVA 249
Y +WD V+
Sbjct: 244 TYYLWDVLTTLVS 256
>gi|215485684|ref|YP_002328115.1| ribonucleoside hydrolase 1 [Escherichia coli O127:H6 str. E2348/69]
gi|415836492|ref|ZP_11518877.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli RN587/1]
gi|417284709|ref|ZP_12072004.1| cytidine/uridine-specific hydrolase [Escherichia coli 3003]
gi|417754413|ref|ZP_12402508.1| ribonucleoside hydrolase 1 [Escherichia coli DEC2B]
gi|418995458|ref|ZP_13543072.1| ribonucleoside hydrolase 1 [Escherichia coli DEC1A]
gi|419000802|ref|ZP_13548361.1| ribonucleoside hydrolase 1 [Escherichia coli DEC1B]
gi|419012180|ref|ZP_13559545.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
DEC1D]
gi|419017084|ref|ZP_13564410.1| ribonucleoside hydrolase 1 [Escherichia coli DEC1E]
gi|419022777|ref|ZP_13570019.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
DEC2A]
gi|419033133|ref|ZP_13580231.1| ribonucleoside hydrolase 1 [Escherichia coli DEC2D]
gi|425276495|ref|ZP_18667837.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
ARS4.2123]
gi|254797720|sp|B7UKT4.1|RIHA_ECO27 RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|215263756|emb|CAS08092.1| ribonucleoside hydrolase 1 [Escherichia coli O127:H6 str. E2348/69]
gi|323191283|gb|EFZ76547.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli RN587/1]
gi|377848848|gb|EHU13824.1| ribonucleoside hydrolase 1 [Escherichia coli DEC1A]
gi|377853449|gb|EHU18348.1| ribonucleoside hydrolase 1 [Escherichia coli DEC1B]
gi|377862945|gb|EHU27752.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
DEC1D]
gi|377867058|gb|EHU31822.1| ribonucleoside hydrolase 1 [Escherichia coli DEC1E]
gi|377868415|gb|EHU33159.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
DEC2A]
gi|377879359|gb|EHU43932.1| ribonucleoside hydrolase 1 [Escherichia coli DEC2B]
gi|377883552|gb|EHU48070.1| ribonucleoside hydrolase 1 [Escherichia coli DEC2D]
gi|386242918|gb|EII84653.1| cytidine/uridine-specific hydrolase [Escherichia coli 3003]
gi|408206950|gb|EKI31715.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
ARS4.2123]
Length = 311
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 78/194 (40%), Gaps = 58/194 (29%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQRLYVNT 60
++NR DIPV G ++ N I +V G
Sbjct: 55 LLNRTDIPVASGAVKPLMRNLIIADNVHG------------------------------- 83
Query: 61 NYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHL 118
GL LP+ +AP + TA +++ + S P+T+ G TN A+ L ++P L
Sbjct: 84 ESGLDGPALPEPA--FAP-QNCTAVELMAKTLRESEEPVTIVSTGPQTNVALLLNSHPEL 140
Query: 119 KKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVL 178
I I +MGGA+ +GN P AEFNI+ DP AA V
Sbjct: 141 HSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAEIVF 178
Query: 179 HSGIPVTIIPLDAT 192
SGIPV + LD T
Sbjct: 179 QSGIPVVMAGLDVT 192
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 106/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 TDIPV------ASGAVKPLM----------------RNLIIADNVHGESGLDGPALPEPA 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVELMA-------KTLRESEEP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHVEDTERFR 206
>gi|384546446|ref|YP_005735699.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus ED133]
gi|298693498|gb|ADI96720.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus ED133]
Length = 311
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 73/173 (42%), Gaps = 34/173 (19%)
Query: 78 PLRQPTA---QQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAI 132
P RQ A V+IN + S P+T+ G TN A L+ P + ++IE I +MGG
Sbjct: 97 PSRQAVAMPASDVIINKVMTSDTPVTIVATGPLTNLATALIREPRIAEHIESITLMGGG- 155
Query: 133 RSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
+ GN P AEFNI+ D AA V SGI + + LD T
Sbjct: 156 -----------------TFGNW-----TPTAEFNIWVDAEAAKRVFESGITINVFGLDVT 193
Query: 193 KTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWS-----GSPPFHEAYCM 240
+ ++ FE N AQ+ + L+ + T+ P H+A +
Sbjct: 194 HQVLADDHVIERFESINNPV-AQFVVELLQFFKKTYKTHFNMDGGPIHDACTI 245
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 114/283 (40%), Gaps = 55/283 (19%)
Query: 405 MGKPVVFDIDMSAGDFLALIYL--LKLPVELINLKGILVSSTGWATSATVDVVYDLLHMM 462
M + +V D D D +ALI + P+E++ + + + + ++L +M
Sbjct: 1 MKRKIVMDCDPGHDDAIALILAGAIDSPLEILAVTTV---AGNQSVDKNTTNALNVLDIM 57
Query: 463 GRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRR 522
GR DI V G P I +A I SG LD LP +P R
Sbjct: 58 GRQDIAVAKG---------ADRPLIKPAAFASEIHGESG--LD-------GPKLPSTPSR 99
Query: 523 YTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQ-IIGL 581
+ P + + ++ S P +TI+ GPLTNLA +I
Sbjct: 100 QA-----------------VAMPASDVIINKVMTSDTP---VTIVATGPLTNLATALIRE 139
Query: 582 QNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
+ I+ + ++GG GN + AEFN+++D AAK VFES + I +
Sbjct: 140 PRIAEHIESITLMGGGTF-----GN-----WTPTAEFNIWVDAEAAKRVFESGITINVFG 189
Query: 642 LHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSH 684
L + +V + ++ + + P + F LLQ ++H
Sbjct: 190 LDVTHQVLADDHVIERF-ESINNPVAQFVVELLQFFKKTYKTH 231
>gi|424466616|ref|ZP_17916816.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA41]
gi|390775999|gb|EIO43978.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
PA41]
Length = 311
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 48/100 (48%), Gaps = 22/100 (22%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
SA P+T+ G TN A+ L ++P L I I +MGGA+ +G
Sbjct: 115 SAEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAM-----------------GLG 157
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
N P AEFNI+ DP AA V SGIPV + LD T
Sbjct: 158 NW-----TPAAEFNIYVDPEAAEIVFQSGIPVVMAGLDVT 192
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 108/264 (40%), Gaps = 67/264 (25%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV A G V P L R+L
Sbjct: 59 TDIPV------AGGAVKP-----------------------------LMREL------II 77
Query: 525 AENSVRFGASQDNDDPELRQPL-------AVDVW-KSIVESIEPGSKITILTNGPLTNLA 576
A+N D P L++P AV++ K++ ES EP +TI++ GP TN+A
Sbjct: 78 ADN---VHGESGLDGPALQEPTFAPQNCTAVELMAKTLRESAEP---VTIVSTGPQTNVA 131
Query: 577 QIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ S I + I+GG G N + AEFN+++DP AA+ VF+S +
Sbjct: 132 LLLNSHPELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGI 182
Query: 636 EIKLIPLHMQRRVASFFKILHKLR 659
+ + L + + + + R
Sbjct: 183 PVVMAGLDVTHKAQIHVEDTERFR 206
>gi|269122214|ref|YP_003310391.1| ribosylpyrimidine nucleosidase [Sebaldella termitidis ATCC 33386]
gi|268616092|gb|ACZ10460.1| Ribosylpyrimidine nucleosidase [Sebaldella termitidis ATCC 33386]
Length = 308
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 50/97 (51%), Gaps = 22/97 (22%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
IT+ G +N + L P +K+ IE I +MGGA + +GN
Sbjct: 117 ITLVPTGPLSNIGMALRKEPRIKEKIEQIVLMGGAYQ-----------------LGN--- 156
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
S P AEFNIF+DP AAY V SG+PV ++ LD T+
Sbjct: 157 --STPAAEFNIFADPEAAYVVFSSGLPVVMMGLDLTR 191
Score = 43.1 bits (100), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 14/100 (14%)
Query: 562 SKITILTNGPLTNLAQIIGLQNSSSV---IQDVYIVGGNKGQDNEKGNVFTVPSSKYAEF 618
KIT++ GPL+N+ + L+ + I+ + ++GG N S+ AEF
Sbjct: 115 EKITLVPTGPLSNIG--MALRKEPRIKEKIEQIVLMGGAYQLGN---------STPAAEF 163
Query: 619 NMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKL 658
N+F DP AA VF S L + ++ L + R+ + +++ K+
Sbjct: 164 NIFADPEAAYVVFSSGLPVVMMGLDLTRQALATKEVVDKI 203
>gi|213418100|ref|ZP_03351170.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 210
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 22/100 (22%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
SA P+T+ G TN A+ L ++P L I I +MGGA+ ++G
Sbjct: 14 SAQPVTIVSTGPQTNVALLLNSHPELHTKIARIVIMGGAM-----------------ALG 56
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
N P AEFNI+ DP AA V SGIPV + LD T
Sbjct: 57 NW-----TPAAEFNIYVDPEAAEIVFQSGIPVVMAGLDVT 91
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 13/110 (11%)
Query: 552 KSIVESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEKGNVFTV 610
K++ ES +P +TI++ GP TN+A ++ + I + I+GG N
Sbjct: 9 KTLRESAQP---VTIVSTGPQTNVALLLNSHPELHTKIARIVIMGGAMALGN-------- 57
Query: 611 PSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRD 660
+ AEFN+++DP AA+ VF+S + + + L + + + + RD
Sbjct: 58 -WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGLDVTHKAQIHAADIERFRD 106
>gi|17227785|ref|NP_484333.1| hypothetical protein alr0289 [Nostoc sp. PCC 7120]
gi|17135267|dbj|BAB77813.1| alr0289 [Nostoc sp. PCC 7120]
Length = 395
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 126/303 (41%), Gaps = 61/303 (20%)
Query: 397 KPDFGKKLMGKPVVFDIDMSAGDFLALIYLLKLP---VELINLKGILVSSTGWATSATVD 453
+P P++ D D S AL Y+L P ++ I + + +A
Sbjct: 27 QPALAASFKPTPLIIDDDGSQDGMTALAYMLANPKFDIQAITIAQGIARPQSFAN----- 81
Query: 454 VVYDLLHMMGRDDI---PVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLY 510
+L M+GR DI P+G+G P G + + I G+ DT +
Sbjct: 82 ---NLERMLGRLDISGIPIGIGR---------STPLAGNNTFPEPIRAGA------DTFW 123
Query: 511 GLARDLPRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNG 570
LP + + +P A + + + S+ P + IL G
Sbjct: 124 SPFVQLPNTAPLV------------------ITRPAAELIVEKVKRSLTP---VAILATG 162
Query: 571 PLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVP-----SSKYAEFNMFLDPL 625
PLTN+A+ L+ ++I ++ ++ G GN+ +P ++ AEFN++ DPL
Sbjct: 163 PLTNIAE--ALRLDPTIINNIAVIEIMGGAVFVPGNLPVLPYPPFSTNTTAEFNIWADPL 220
Query: 626 AAKAVFES---KLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQ 682
AA+ VF + L+I+L PL ++A F + + TPES + L +T+ Q
Sbjct: 221 AAQEVFAAGGQGLKIQLTPLDATNQIA-FSRADQQAWLATATPESKLAAEFLDFALTVIQ 279
Query: 683 SHH 685
S++
Sbjct: 280 SNN 282
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 52/115 (45%), Gaps = 24/115 (20%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
S P+ + G TN A L +P + NI I +MGGA+ G
Sbjct: 152 SLTPVAILATGPLTNIAEALRLDPTIINNIAVIEIMGGAVFVP----------------G 195
Query: 153 NL----YPD-DSNPYAEFNIFSDPFAAYTVLHS---GIPVTIIPLDATKTIPVSE 199
NL YP +N AEFNI++DP AA V + G+ + + PLDAT I S
Sbjct: 196 NLPVLPYPPFSTNTTAEFNIWADPLAAQEVFAAGGQGLKIQLTPLDATNQIAFSR 250
>gi|415814848|ref|ZP_11506446.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli LT-68]
gi|323170774|gb|EFZ56424.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli LT-68]
Length = 175
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 27 VHGESGLDGPALPE--PTFAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 83
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 84 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 121
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 122 IVFQSGIPVVMAGLDVT 138
Score = 45.8 bits (107), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 22/152 (14%)
Query: 538 DDPELRQPL-------AVDVW-KSIVESIEPGSKITILTNGPLTNLAQIIGLQNS-SSVI 588
D P L +P AV++ K++ ES EP +TI++ GP TN+A ++ S I
Sbjct: 34 DGPALPEPTFAPQNCTAVELMAKTLRESAEP---VTIVSTGPQTNVALLLNSHPELHSKI 90
Query: 589 QDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
+ I+GG G N + AEFN+++DP AA+ VF+S + + + L + +
Sbjct: 91 ARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGLDVTHKA 141
Query: 649 ASFFKILHKLRDRKKTPESVFSQRLLQGLMTL 680
+ + R P S LL L+ L
Sbjct: 142 QIHVEDTERFR-AIGNPVSTIVAELLDFLVML 172
>gi|407798745|ref|ZP_11145648.1| pyrimidine-specific ribonucleoside hydrolase RihA [Oceaniovalibus
guishaninsula JLT2003]
gi|407059093|gb|EKE45026.1| pyrimidine-specific ribonucleoside hydrolase RihA [Oceaniovalibus
guishaninsula JLT2003]
Length = 312
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 65/146 (44%), Gaps = 27/146 (18%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP---ITVFVMGSHTNFAIFLM 113
+V+ GL LP PL+ ++ + A P +T+ +G TN A+ L
Sbjct: 80 HVHGRTGLDGPVLPD---PAMPLQDMHGVDFIVRTLRAEPEGSVTLCALGPLTNIAMALR 136
Query: 114 NNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFA 173
P + I I +MGGA +GN+ P AEFNIF DP A
Sbjct: 137 MAPDIAGRIARIVLMGGAYFE----------------VGNI-----TPAAEFNIFVDPEA 175
Query: 174 AYTVLHSGIPVTIIPLDATKTIPVSE 199
A V G P+T++PLDAT + V++
Sbjct: 176 AAVVFGCGAPITVLPLDATHKVLVTK 201
Score = 46.2 bits (108), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 559 EPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAE 617
EP +T+ GPLTN+A + + + + I + ++GG E GN+ + AE
Sbjct: 115 EPEGSVTLCALGPLTNIAMALRMAPDIAGRIARIVLMGGAY---FEVGNI-----TPAAE 166
Query: 618 FNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
FN+F+DP AA VF I ++PL +V
Sbjct: 167 FNIFVDPEAAAVVFGCGAPITVLPLDATHKV 197
>gi|365903265|ref|ZP_09441088.1| inosine-uridine nucleoside N-ribohydrolase [Lactobacillus
malefermentans KCTC 3548]
Length = 313
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 105/222 (47%), Gaps = 16/222 (7%)
Query: 543 RQPLAVD-VWKSIVESI-EPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKG 599
+ P+A + WK +V+ I SK+T+L GPLT+LA + + I+ + +GG
Sbjct: 99 KTPIAKEPAWKDMVDKIMASDSKVTVLMTGPLTDLASALKAEPKLQDKIEKLVWMGGTF- 157
Query: 600 QDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLR 659
+ +GNV E+N F DP A K V++S LEI ++ L R+V + + +R
Sbjct: 158 --DNRGNVAEPEQDGTMEWNAFWDPEAVKTVWDSSLEIHMVGLESTRKVP----LTNDVR 211
Query: 660 DRKKTPESVFSQRLL-QGLMTLQQSHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKSL 718
DR L+ G + H + +L +VL + P + +T KI +
Sbjct: 212 DRWAKQRKYAGLDLIGNGYALVPPLAHFETNSTYYLWDVL-TTVSSQYPEIVKT-KIVNS 269
Query: 719 EIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEV 760
++ISDG G+ + G+ V+++ ++ ++D E+
Sbjct: 270 DVISDGPAQ--GRTF-EKADGRPVEMVYDVDHDAFFDKIDEL 308
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 30/181 (16%)
Query: 69 LPQGGRKYAPLRQPTAQQVLINAISAG--PITVFVMGSHTNFAIFLMNNPHLKKNIEHIY 126
L + G P+ + A + +++ I A +TV + G T+ A L P L+ IE +
Sbjct: 92 LNEFGAPKTPIAKEPAWKDMVDKIMASDSKVTVLMTGPLTDLASALKAEPKLQDKIEKLV 151
Query: 127 VMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTI 186
MGG D+ GN+ + + E+N F DP A TV S + + +
Sbjct: 152 WMGGTF----------------DNRGNVAEPEQDGTMEWNAFWDPEAVKTVWDSSLEIHM 195
Query: 187 IPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPF-----HEAYCMW 241
+ L++T+ +P++ + ++ + Q + L +I + ++ PP + Y +W
Sbjct: 196 VGLESTRKVPLTNDV-------RDRWAKQRKYAGLDLIGNGYALVPPLAHFETNSTYYLW 248
Query: 242 D 242
D
Sbjct: 249 D 249
>gi|117622860|ref|YP_851773.1| ribonucleoside hydrolase 1 [Escherichia coli APEC O1]
gi|161486285|ref|NP_752665.2| ribonucleoside hydrolase 1 [Escherichia coli CFT073]
gi|162138473|ref|YP_539678.2| ribonucleoside hydrolase 1 [Escherichia coli UTI89]
gi|218557582|ref|YP_002390495.1| ribonucleoside hydrolase 1 [Escherichia coli S88]
gi|227884376|ref|ZP_04002181.1| ribosylpyrimidine nucleosidase [Escherichia coli 83972]
gi|300989990|ref|ZP_07179066.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 45-1]
gi|301049841|ref|ZP_07196780.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 185-1]
gi|386598387|ref|YP_006099893.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
IHE3034]
gi|386605434|ref|YP_006111734.1| ribonucleoside hydrolase 1 [Escherichia coli UM146]
gi|386628197|ref|YP_006147917.1| ribonucleoside hydrolase 1 [Escherichia coli str. 'clone D i2']
gi|386633117|ref|YP_006152836.1| ribonucleoside hydrolase 1 [Escherichia coli str. 'clone D i14']
gi|386638022|ref|YP_006104820.1| pyrimidine-specific ribonucleoside hydrolase [Escherichia coli ABU
83972]
gi|416337838|ref|ZP_11674152.1| Inosine-uridine preferring nucleoside hydrolase [Escherichia coli
WV_060327]
gi|417083118|ref|ZP_11951254.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
cloneA_i1]
gi|419699527|ref|ZP_14227143.1| ribonucleoside hydrolase 1 [Escherichia coli SCI-07]
gi|419945371|ref|ZP_14461816.1| ribonucleoside hydrolase 1 [Escherichia coli HM605]
gi|422359109|ref|ZP_16439758.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 110-3]
gi|422365208|ref|ZP_16445710.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 153-1]
gi|422382484|ref|ZP_16462644.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 57-2]
gi|422748323|ref|ZP_16802236.1| inosine-uridine nucleoside hydrolase [Escherichia coli H252]
gi|422753271|ref|ZP_16807098.1| inosine-uridine nucleoside hydrolase [Escherichia coli H263]
gi|422839135|ref|ZP_16887107.1| hypothetical protein ESPG_01793 [Escherichia coli H397]
gi|432356956|ref|ZP_19600203.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE4]
gi|432361428|ref|ZP_19604613.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE5]
gi|432410672|ref|ZP_19653355.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE39]
gi|432430720|ref|ZP_19673165.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE187]
gi|432435248|ref|ZP_19677649.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE188]
gi|432439990|ref|ZP_19682345.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE189]
gi|432445103|ref|ZP_19687411.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE191]
gi|432455533|ref|ZP_19697735.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE201]
gi|432464632|ref|ZP_19706740.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE205]
gi|432494473|ref|ZP_19736291.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE214]
gi|432503312|ref|ZP_19745049.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE220]
gi|432522757|ref|ZP_19759896.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE230]
gi|432567443|ref|ZP_19803970.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE53]
gi|432572605|ref|ZP_19809096.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE55]
gi|432582730|ref|ZP_19819140.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE57]
gi|432586909|ref|ZP_19823281.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE58]
gi|432591722|ref|ZP_19828051.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE60]
gi|432596552|ref|ZP_19832835.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE62]
gi|432606488|ref|ZP_19842684.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE67]
gi|432650132|ref|ZP_19885894.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE87]
gi|432731335|ref|ZP_19966173.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE45]
gi|432753407|ref|ZP_19987975.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE22]
gi|432758413|ref|ZP_19992917.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE46]
gi|432777548|ref|ZP_20011799.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE59]
gi|432782511|ref|ZP_20016697.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE63]
gi|432786337|ref|ZP_20020503.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE65]
gi|432819929|ref|ZP_20053643.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE118]
gi|432826143|ref|ZP_20059799.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE123]
gi|432842891|ref|ZP_20076312.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE141]
gi|432977328|ref|ZP_20166153.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE209]
gi|432994399|ref|ZP_20183016.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE218]
gi|432998818|ref|ZP_20187358.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE223]
gi|433004137|ref|ZP_20192575.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE227]
gi|433011346|ref|ZP_20199751.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE229]
gi|433012843|ref|ZP_20201221.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE104]
gi|433022467|ref|ZP_20210483.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE106]
gi|433056964|ref|ZP_20244048.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE124]
gi|433071719|ref|ZP_20258415.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE129]
gi|433086277|ref|ZP_20272674.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE137]
gi|433114555|ref|ZP_20300371.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE153]
gi|433119220|ref|ZP_20304929.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE157]
gi|433124172|ref|ZP_20309763.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE160]
gi|433138233|ref|ZP_20323520.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE167]
gi|433148061|ref|ZP_20333127.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE174]
gi|433152760|ref|ZP_20337728.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE176]
gi|433162458|ref|ZP_20347219.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE179]
gi|433167471|ref|ZP_20352139.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE180]
gi|433182207|ref|ZP_20366504.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE85]
gi|433206787|ref|ZP_20390486.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE97]
gi|433211533|ref|ZP_20395148.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE99]
gi|433323346|ref|ZP_20400695.1| ribonucleoside hydrolase 1 [Escherichia coli J96]
gi|442606877|ref|ZP_21021672.1| Inosine-uridine preferring nucleoside hydrolase [Escherichia coli
Nissle 1917]
gi|85540732|sp|Q8FJY8.2|RIHA_ECOL6 RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|166226413|sp|A1A8R9.1|RIHA_ECOK1 RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|226739271|sp|B7MFR7.1|RIHA_ECO45 RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|115511984|gb|ABJ00059.1| conserved hypothetical protein [Escherichia coli APEC O1]
gi|218364351|emb|CAR02026.1| ribonucleoside hydrolase 1 [Escherichia coli S88]
gi|227838462|gb|EEJ48928.1| ribosylpyrimidine nucleosidase [Escherichia coli 83972]
gi|294490835|gb|ADE89591.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
IHE3034]
gi|300298393|gb|EFJ54778.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 185-1]
gi|300407265|gb|EFJ90803.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 45-1]
gi|307552514|gb|ADN45289.1| pyrimidine-specific ribonucleoside hydrolase [Escherichia coli ABU
83972]
gi|307627918|gb|ADN72222.1| ribonucleoside hydrolase 1 [Escherichia coli UM146]
gi|315287084|gb|EFU46498.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 110-3]
gi|315292090|gb|EFU51442.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 153-1]
gi|320194174|gb|EFW68806.1| Inosine-uridine preferring nucleoside hydrolase [Escherichia coli
WV_060327]
gi|323952778|gb|EGB48646.1| inosine-uridine nucleoside hydrolase [Escherichia coli H252]
gi|323958403|gb|EGB54109.1| inosine-uridine nucleoside hydrolase [Escherichia coli H263]
gi|324006306|gb|EGB75525.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 57-2]
gi|355352986|gb|EHG02159.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
cloneA_i1]
gi|355419096|gb|AER83293.1| ribonucleoside hydrolase 1 [Escherichia coli str. 'clone D i2']
gi|355424016|gb|AER88212.1| ribonucleoside hydrolase 1 [Escherichia coli str. 'clone D i14']
gi|371611156|gb|EHN99682.1| hypothetical protein ESPG_01793 [Escherichia coli H397]
gi|380349542|gb|EIA37814.1| ribonucleoside hydrolase 1 [Escherichia coli SCI-07]
gi|388415809|gb|EIL75720.1| ribonucleoside hydrolase 1 [Escherichia coli HM605]
gi|430879766|gb|ELC03097.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE4]
gi|430889946|gb|ELC12593.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE5]
gi|430938608|gb|ELC58849.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE39]
gi|430956342|gb|ELC75018.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE187]
gi|430966827|gb|ELC84190.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE188]
gi|430969222|gb|ELC86372.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE189]
gi|430975825|gb|ELC92709.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE191]
gi|430985405|gb|ELD02011.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE201]
gi|430997383|gb|ELD13650.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE205]
gi|431027989|gb|ELD41034.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE214]
gi|431042314|gb|ELD52806.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE220]
gi|431054877|gb|ELD64446.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE230]
gi|431103276|gb|ELE07946.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE53]
gi|431110943|gb|ELE14860.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE55]
gi|431119746|gb|ELE22745.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE57]
gi|431124189|gb|ELE26843.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE58]
gi|431133166|gb|ELE35164.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE60]
gi|431133455|gb|ELE35445.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE62]
gi|431140710|gb|ELE42476.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE67]
gi|431193503|gb|ELE92839.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE87]
gi|431278243|gb|ELF69237.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE45]
gi|431305788|gb|ELF94109.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE22]
gi|431311623|gb|ELF99781.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE46]
gi|431330148|gb|ELG17430.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE59]
gi|431332223|gb|ELG19466.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE63]
gi|431341466|gb|ELG28473.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE65]
gi|431370931|gb|ELG56724.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE118]
gi|431374339|gb|ELG59931.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE123]
gi|431397419|gb|ELG80875.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE141]
gi|431482432|gb|ELH62135.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE209]
gi|431509733|gb|ELH87982.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE218]
gi|431514387|gb|ELH92229.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE223]
gi|431517458|gb|ELH94980.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE227]
gi|431519558|gb|ELH97010.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE229]
gi|431535114|gb|ELI11497.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE104]
gi|431540150|gb|ELI15779.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE106]
gi|431573951|gb|ELI46740.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE124]
gi|431592810|gb|ELI63379.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE129]
gi|431609313|gb|ELI78638.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE137]
gi|431637055|gb|ELJ05174.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE153]
gi|431648763|gb|ELJ16137.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE157]
gi|431650275|gb|ELJ17612.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE160]
gi|431665202|gb|ELJ31929.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE167]
gi|431676954|gb|ELJ43037.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE174]
gi|431678340|gb|ELJ44344.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE176]
gi|431691815|gb|ELJ57266.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE179]
gi|431693471|gb|ELJ58884.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE180]
gi|431711295|gb|ELJ75648.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE85]
gi|431732879|gb|ELJ96327.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE97]
gi|431736188|gb|ELJ99530.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE99]
gi|432348049|gb|ELL42501.1| ribonucleoside hydrolase 1 [Escherichia coli J96]
gi|441712184|emb|CCQ07649.1| Inosine-uridine preferring nucleoside hydrolase [Escherichia coli
Nissle 1917]
Length = 311
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 78/194 (40%), Gaps = 58/194 (29%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQRLYVNT 60
++NR DIPV G ++ N I +V G
Sbjct: 55 LLNRTDIPVASGAVKPLMRNLIIADNVHG------------------------------- 83
Query: 61 NYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHL 118
GL LP+ +AP + TA +++ + S P+T+ G TN A+ L ++P L
Sbjct: 84 ESGLDGPALPE--PTFAP-QNCTAVELMAKTLRESEEPVTIVSTGPQTNVALLLNSHPEL 140
Query: 119 KKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVL 178
I I +MGGA+ +GN P AEFNI+ DP AA V
Sbjct: 141 HSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAEIVF 178
Query: 179 HSGIPVTIIPLDAT 192
SGIPV + LD T
Sbjct: 179 QSGIPVVMAGLDVT 192
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 106/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 TDIPV------ASGAVKPLM----------------RNLIIADNVHGESGLDGPALPEPT 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVELMA-------KTLRESEEP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHVEDTERFR 206
>gi|110640873|ref|YP_668601.1| ribonucleoside hydrolase 1 [Escherichia coli 536]
gi|191173954|ref|ZP_03035472.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
F11]
gi|218688467|ref|YP_002396679.1| ribonucleoside hydrolase 1 [Escherichia coli ED1a]
gi|222155399|ref|YP_002555538.1| Pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
LF82]
gi|300996686|ref|ZP_07181511.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 200-1]
gi|331656671|ref|ZP_08357633.1| cytidine/uridine-specific hydrolase [Escherichia coli TA206]
gi|387615930|ref|YP_006118952.1| ribonucleoside hydrolase 1 [Escherichia coli O83:H1 str. NRG 857C]
gi|417289038|ref|ZP_12076323.1| cytidine/uridine-specific hydrolase [Escherichia coli TW07793]
gi|422369071|ref|ZP_16449474.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 16-3]
gi|422378259|ref|ZP_16458482.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 60-1]
gi|432470041|ref|ZP_19712094.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE206]
gi|432712329|ref|ZP_19947381.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE8]
gi|432800892|ref|ZP_20034880.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE84]
gi|432897482|ref|ZP_20108391.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE192]
gi|433027652|ref|ZP_20215527.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE109]
gi|433076805|ref|ZP_20263371.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE131]
gi|433197236|ref|ZP_20381162.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE94]
gi|123148292|sp|Q0TK29.1|RIHA_ECOL5 RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|254797722|sp|B7MRT1.1|RIHA_ECO81 RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|110342465|gb|ABG68702.1| putative purine nucleoside hydrolase [Escherichia coli 536]
gi|190905730|gb|EDV65351.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
F11]
gi|218426031|emb|CAR06848.1| ribonucleoside hydrolase 1 [Escherichia coli ED1a]
gi|222032404|emb|CAP75143.1| Pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
LF82]
gi|300304464|gb|EFJ58984.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 200-1]
gi|312945191|gb|ADR26018.1| ribonucleoside hydrolase 1 [Escherichia coli O83:H1 str. NRG 857C]
gi|315299182|gb|EFU58436.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 16-3]
gi|324010468|gb|EGB79687.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 60-1]
gi|331054919|gb|EGI26928.1| cytidine/uridine-specific hydrolase [Escherichia coli TA206]
gi|386247830|gb|EII94003.1| cytidine/uridine-specific hydrolase [Escherichia coli TW07793]
gi|431000108|gb|ELD16182.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE206]
gi|431259844|gb|ELF52207.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE8]
gi|431351084|gb|ELG37882.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE84]
gi|431429528|gb|ELH11456.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE192]
gi|431545722|gb|ELI20369.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE109]
gi|431601382|gb|ELI70899.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE131]
gi|431725423|gb|ELJ89277.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE94]
Length = 311
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 78/194 (40%), Gaps = 58/194 (29%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQRLYVNT 60
++NR DIPV G ++ N I +V G
Sbjct: 55 LLNRTDIPVASGAVKPLMRNLIIADNVHG------------------------------- 83
Query: 61 NYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHL 118
GL LP+ +AP + TA +++ + S P+T+ G TN A+ L ++P L
Sbjct: 84 ESGLDGPALPE--PTFAP-QNCTAVELMAKTLCESEEPVTIVSTGPQTNVALLLNSHPEL 140
Query: 119 KKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVL 178
I I +MGGA+ +GN P AEFNI+ DP AA V
Sbjct: 141 HSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAEIVF 178
Query: 179 HSGIPVTIIPLDAT 192
SGIPV + LD T
Sbjct: 179 QSGIPVVMAGLDVT 192
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 106/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 TDIPV------ASGAVKPLM----------------RNLIIADNVHGESGLDGPALPEPT 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVELMA-------KTLCESEEP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHVEDTERFR 206
>gi|157960838|ref|YP_001500872.1| inosine/uridine-preferring nucleoside hydrolase [Shewanella
pealeana ATCC 700345]
gi|157845838|gb|ABV86337.1| Inosine/uridine-preferring nucleoside hydrolase [Shewanella
pealeana ATCC 700345]
Length = 324
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 66/145 (45%), Gaps = 22/145 (15%)
Query: 51 PVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNF 108
PVG + V+ G +P A R +A Q +I+A+ A P IT+ +G TN
Sbjct: 74 PVGPSVVVHGESGFGDVEVPNEVEAVADPR--SAHQYIIDAVKAEPNEITLVAIGPLTNL 131
Query: 109 AIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIF 168
A+ L P + ++ + +MGGA + D GN+ PYAE NI
Sbjct: 132 ALALQAEPEIVNLVKEVVIMGGAFGVN-------------DHRGNV-----TPYAEANIH 173
Query: 169 SDPFAAYTVLHSGIPVTIIPLDATK 193
DP AA V + PV II LD T+
Sbjct: 174 DDPHAADIVFSASWPVVIIGLDVTE 198
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 67/127 (52%), Gaps = 20/127 (15%)
Query: 539 DPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSV---IQDVYIVG 595
DP +D K+ EP ++IT++ GPLTNLA + LQ + +++V I+G
Sbjct: 101 DPRSAHQYIIDAVKA-----EP-NEITLVAIGPLTNLA--LALQAEPEIVNLVKEVVIMG 152
Query: 596 GNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFF--K 653
G G ++ +GNV + YAE N+ DP AA VF + + +I L + + SFF
Sbjct: 153 GAFGVNDHRGNV-----TPYAEANIHDDPHAADIVFSASWPVVIIGLDVTEQ--SFFTGD 205
Query: 654 ILHKLRD 660
L +LRD
Sbjct: 206 YLEQLRD 212
>gi|411010029|ref|ZP_11386358.1| ribonucleoside hydrolase 1 [Aeromonas aquariorum AAK1]
Length = 311
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 77/178 (43%), Gaps = 35/178 (19%)
Query: 51 PVGQRLYVNTNY----GLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGS 104
P+ + L + N GL LP +AP+ TA +++ + S P+T+ G
Sbjct: 70 PLARELIIADNVHGESGLDGPKLPD--PAFAPVAM-TALELMARCLRESPEPVTLVPTGP 126
Query: 105 HTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAE 164
TN A+ L+ +P LK I I +MGGA + GN P AE
Sbjct: 127 LTNIALLLVAHPELKSKIARIVLMGGAAGA-----------------GNW-----TPAAE 164
Query: 165 FNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFER-RQNTYEAQYCFQSL 221
FNI+ DP AA V SG+P+T+ LD T V + + ER R T C L
Sbjct: 165 FNIYVDPEAADMVFKSGLPITMCGLDVTHQAQVMDE---DIERVRAITNPVAQCVAGL 219
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 109/261 (41%), Gaps = 61/261 (23%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M PV+ D D D +ALI L P + + + S+ T++ +L ++GR
Sbjct: 1 MALPVILDCDPGHDDAIALILALASPE--LKVLAVTTSAGNQTPDKTLNNALRILTLLGR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DDIPV G PK PL + +D ++G + D P+ P
Sbjct: 59 DDIPVAAG--------APK-------------PLARE-LIIADNVHGESGLDGPKLP--- 93
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVW----KSIVESIEPGSKITILTNGPLTNLAQI- 578
DP P+A+ + + ES EP +T++ GPLTN+A +
Sbjct: 94 ---------------DPAF-APVAMTALELMARCLRESPEP---VTLVPTGPLTNIALLL 134
Query: 579 IGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIK 638
+ S I + ++GG G N + AEFN+++DP AA VF+S L I
Sbjct: 135 VAHPELKSKIARIVLMGGAAGAGNW---------TPAAEFNIYVDPEAADMVFKSGLPIT 185
Query: 639 LIPLHMQRRVASFFKILHKLR 659
+ L + + + + ++R
Sbjct: 186 MCGLDVTHQAQVMDEDIERVR 206
>gi|304397958|ref|ZP_07379834.1| Inosine/uridine-preferring nucleoside hydrolase [Pantoea sp. aB]
gi|304354669|gb|EFM19040.1| Inosine/uridine-preferring nucleoside hydrolase [Pantoea sp. aB]
Length = 306
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 23/138 (16%)
Query: 82 PTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNS 139
P A Q +I+++ A P IT+ +G TN A + P + ++ + +MGGA +D +
Sbjct: 96 PGAVQFIIDSVRAQPHQITLVAIGPLTNIATAINQAPDIIPLVKELVIMGGAFGTDGHS- 154
Query: 140 TNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSE 199
GN+ P++EFNI+ DP AA VL S + V +IPLD T + +S
Sbjct: 155 ------------GNV-----TPFSEFNIWKDPHAADQVLASALNVVVIPLDVTHKVLISS 197
Query: 200 NFFVEFERRQNTYEAQYC 217
+ E +R + C
Sbjct: 198 D---EVQRLNQPVLSAIC 212
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 16/150 (10%)
Query: 504 LDSDTLYGLARDL---PRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEP 560
++++ G +R L P +P R E+ G + DN + P AV + I++S+
Sbjct: 55 INAEVYRGCSRPLALAPSAPARLHGEDG--LGDAFDNTCSD-EAPGAV---QFIIDSVRA 108
Query: 561 G-SKITILTNGPLTNLAQIIG-LQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEF 618
+IT++ GPLTN+A I + +++++ I+GG G D GNV + ++EF
Sbjct: 109 QPHQITLVAIGPLTNIATAINQAPDIIPLVKELVIMGGAFGTDGHSGNV-----TPFSEF 163
Query: 619 NMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
N++ DP AA V S L + +IPL + +V
Sbjct: 164 NIWKDPHAADQVLASALNVVVIPLDVTHKV 193
>gi|194692550|gb|ACF80359.1| unknown [Zea mays]
Length = 325
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 81/184 (44%), Gaps = 27/184 (14%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISA--GPITVFVMGSHTNFAIFLMN 114
+V+ + G+ FLP K + +A LIN +S G ++V +G TN A+ +
Sbjct: 89 FVHGSDGIGNLFLPVPSVKKV---EESAADFLINKVSEFPGEVSVLALGPLTNVALAIKR 145
Query: 115 NPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAA 174
+P ++ I V+GGA + GN+ NP AE NI DP AA
Sbjct: 146 DPSFASKVKKIVVLGGAFFA----------------AGNV-----NPAAEANIHGDPEAA 184
Query: 175 YTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPF 234
V SG + ++ ++ T + +++ +E R A + ++ K RD + S F
Sbjct: 185 DIVFTSGADIVVVGINITTQVCLTDEDLLEL-RNSKGKHAAFLYEMCKFYRDWHAKSDGF 243
Query: 235 HEAY 238
H +
Sbjct: 244 HGIF 247
>gi|330003693|ref|ZP_08304712.1| cytidine/uridine-specific hydrolase [Klebsiella sp. MS 92-3]
gi|328536868|gb|EGF63171.1| cytidine/uridine-specific hydrolase [Klebsiella sp. MS 92-3]
Length = 311
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 70/156 (44%), Gaps = 27/156 (17%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + + S P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPSLPEPA--FAP-QNCTAVELMASVLRESQEPVTLVATGPQTNVALLLASH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHAKIARIVIMGGAM-----------------GLGNW-----QPAAEFNIYVDPQAAE 175
Query: 176 TVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNT 211
V SGIPV + LD T + F + NT
Sbjct: 176 MVFQSGIPVVMAGLDVTHKAQILPADIERFRQIGNT 211
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 110/278 (39%), Gaps = 67/278 (24%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + +K + S+ T+ V +L ++ R
Sbjct: 1 MALPIMIDCDPGHDDAIALVLALASPE--LEVKAVTASAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV A G P L RDL
Sbjct: 59 PDIPV------AGGAWKP-----------------------------LMRDL------II 77
Query: 525 AENSVRFGASQDNDDPELRQP-------LAVDVWKSIV-ESIEPGSKITILTNGPLTNLA 576
A+N D P L +P AV++ S++ ES EP +T++ GP TN+A
Sbjct: 78 ADN---VHGESGLDGPSLPEPAFAPQNCTAVELMASVLRESQEP---VTLVATGPQTNVA 131
Query: 577 QIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ + I + I+GG G N + AEFN+++DP AA+ VF+S +
Sbjct: 132 LLLASHPELHAKIARIVIMGGAMGLGNWQ---------PAAEFNIYVDPQAAEMVFQSGI 182
Query: 636 EIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRL 673
+ + L + + + + R T ++ ++ L
Sbjct: 183 PVVMAGLDVTHKAQILPADIERFRQIGNTVSTIIAELL 220
>gi|388256736|ref|ZP_10133917.1| Purine nucleoside permease [Cellvibrio sp. BR]
gi|387940436|gb|EIK46986.1| Purine nucleoside permease [Cellvibrio sp. BR]
Length = 369
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 32/163 (19%)
Query: 96 PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNL- 154
P+T+ G TN A +L P K I+ + +MGG + D+ GN+
Sbjct: 149 PVTLIATGPLTNIAHWLERYPQDKNKIDRLVIMGGTV----------------DAPGNII 192
Query: 155 -------YPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFER 207
+P N AE+NIF DP AA V +G+P+ ++ LD T ++ V+ +F++
Sbjct: 193 VPLFTKGHP---NTTAEWNIFIDPLAADKVFAAGLPIVLVGLDITNSVRVTTQVAADFKQ 249
Query: 208 RQNTYEAQYCFQSLKMIRDTWSGSPPFHEAYCMWDSFMAGVAL 250
T A+ F + ++ W + Y WD+ +A+
Sbjct: 250 AVTTDSAK--FWDAVLDKNDWFIA---SNEYYFWDTLAVMIAM 287
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 134/313 (42%), Gaps = 59/313 (18%)
Query: 406 GKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSAT-VDVVYDLLHMMGR 464
K ++FD DM+ D+ AL+YLL P N+ + +S++G + +D L+ + G+
Sbjct: 29 SKSIIFDNDMAIDDWAALLYLLHHPKA--NVIAVTISASGESRCKPGLDNTNALIDLSGK 86
Query: 465 --DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRR 522
IPV GD +P G + +A DSDTL G+ P +
Sbjct: 87 VSKTIPVACGD---------DYPLDGYFVFPEA------WRKDSDTLSGV-------PIK 124
Query: 523 YTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQII-GL 581
+A A+ D Q A + ++ ++ EP +T++ GPLTN+A +
Sbjct: 125 SSAR------AASD-------QHAAAIIHAALADAKEP---VTLIATGPLTNIAHWLERY 168
Query: 582 QNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSK-----YAEFNMFLDPLAAKAVFESKLE 636
+ I + I+GG + GN+ +K AE+N+F+DPLAA VF + L
Sbjct: 169 PQDKNKIDRLVIMGGTV---DAPGNIIVPLFTKGHPNTTAEWNIFIDPLAADKVFAAGLP 225
Query: 637 IKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGE 696
I L+ L + V ++ + T + F +L S+ Y+ DT
Sbjct: 226 IVLVGLDITNSVRVTTQVAADFKQAVTTDSAKFWDAVLDKNDWFIASNE-YYFWDTL--- 281
Query: 697 VLGAVILGGNPHL 709
AV++ P L
Sbjct: 282 ---AVMIAMEPEL 291
>gi|251810510|ref|ZP_04824983.1| possible ribosylpyrimidine nucleosidase [Staphylococcus epidermidis
BCM-HMP0060]
gi|293366955|ref|ZP_06613630.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis M23864:W2(grey)]
gi|251805921|gb|EES58578.1| possible ribosylpyrimidine nucleosidase [Staphylococcus epidermidis
BCM-HMP0060]
gi|291318930|gb|EFE59301.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis M23864:W2(grey)]
Length = 309
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 37/186 (19%)
Query: 85 QQVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQ 144
+ +L+N + P+T+ +G TN AI L + P ++ I+ I +MGG+
Sbjct: 116 RNLLVN--TQEPLTLIAIGPLTNIAILLTSYPEVQPFIKEIVLMGGSTGR---------- 163
Query: 145 SEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVE 204
GN+ P AEFNI+ DP AA V +SG+P+T+I LD + + +F +
Sbjct: 164 -------GNV-----TPLAEFNIYCDPEAAQIVFNSGLPLTMIGLDLAREALFTHHFVKD 211
Query: 205 FERRQNTYEAQY-CFQSLKMIRDTWSGSPPFHEAYCMWDSFMAGVALSIMLNSSSHNGEN 263
F+ T Y FQ K S F + ++D F + +L+ + N +
Sbjct: 212 FKDTNATSNMLYNLFQHYK--------SEDFEIGFKLYDVF----TILYLLDPEAFNVKE 259
Query: 264 ACSEME 269
A +++E
Sbjct: 260 AYTQIE 265
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 15/138 (10%)
Query: 535 QDNDDPELRQPLAVDVWKSI-VESIEPGSKITILTNGPLTNLAQII-GLQNSSSVIQDVY 592
Q N D +L AV+ +++ V + EP +T++ GPLTN+A ++ I+++
Sbjct: 100 QINQD-DLTSIHAVEAMRNLLVNTQEP---LTLIAIGPLTNIAILLTSYPEVQPFIKEIV 155
Query: 593 IVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFF 652
++GG+ G +GNV + AEFN++ DP AA+ VF S L + +I L + R
Sbjct: 156 LMGGSTG----RGNV-----TPLAEFNIYCDPEAAQIVFNSGLPLTMIGLDLAREALFTH 206
Query: 653 KILHKLRDRKKTPESVFS 670
+ +D T +++
Sbjct: 207 HFVKDFKDTNATSNMLYN 224
>gi|417902976|ref|ZP_12546835.1| cytidine/uridine-specific hydrolase [Staphylococcus aureus subsp.
aureus 21269]
gi|341850404|gb|EGS91524.1| cytidine/uridine-specific hydrolase [Staphylococcus aureus subsp.
aureus 21269]
Length = 311
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 73/173 (42%), Gaps = 34/173 (19%)
Query: 78 PLRQPTA---QQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAI 132
P RQ A V+IN + S P+T+ G TN A L+ P + ++IE I +MGG
Sbjct: 97 PSRQAVAMPASDVIINKVMTSDTPVTIVATGPLTNVATTLIREPRIAEHIESITLMGGG- 155
Query: 133 RSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
+ GN P AEFNI+ D AA V SGI + + LD T
Sbjct: 156 -----------------TFGNW-----TPTAEFNIWVDAEAAKRVFESGITINVFGLDVT 193
Query: 193 KTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWS-----GSPPFHEAYCM 240
+ ++ FE N AQ+ + L+ + T+ P H+A +
Sbjct: 194 HQVLADDHVIERFESINNPV-AQFVVELLQFFKKTYKTHFNMDGGPIHDACTI 245
Score = 46.6 bits (109), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 114/283 (40%), Gaps = 55/283 (19%)
Query: 405 MGKPVVFDIDMSAGDFLALIYL--LKLPVELINLKGILVSSTGWATSATVDVVYDLLHMM 462
M + ++ D D D +ALI + P+E++ + + + + ++L +M
Sbjct: 1 MKRKIIMDCDPGHDDAIALILAGAIDSPLEILAVTTV---AGNQSVDKNTTNALNVLDIM 57
Query: 463 GRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRR 522
GR DI V G P I +A I SG LD LP +P R
Sbjct: 58 GRQDIAVAKG---------ADRPLIKPAAFASEIHGESG--LD-------GPKLPSTPSR 99
Query: 523 YTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQ-IIGL 581
+ P + + ++ S P +TI+ GPLTN+A +I
Sbjct: 100 QA-----------------VAMPASDVIINKVMTSDTP---VTIVATGPLTNVATTLIRE 139
Query: 582 QNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
+ I+ + ++GG GN + AEFN+++D AAK VFES + I +
Sbjct: 140 PRIAEHIESITLMGGGTF-----GN-----WTPTAEFNIWVDAEAAKRVFESGITINVFG 189
Query: 642 LHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSH 684
L + +V + ++ + + P + F LLQ ++H
Sbjct: 190 LDVTHQVLADDHVIERF-ESINNPVAQFVVELLQFFKKTYKTH 231
>gi|198245026|ref|YP_002214649.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|375118137|ref|ZP_09763304.1| inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Dublin str. SD3246]
gi|445140064|ref|ZP_21384716.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Dublin str. SL1438]
gi|445149320|ref|ZP_21389090.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Dublin str. HWS51]
gi|226739281|sp|B5FNA2.1|RIHA_SALDC RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|197939542|gb|ACH76875.1| inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|326622404|gb|EGE28749.1| inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Dublin str. SD3246]
gi|444852765|gb|ELX77840.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Dublin str. SL1438]
gi|444857974|gb|ELX82967.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Dublin str. HWS51]
Length = 311
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 59/128 (46%), Gaps = 33/128 (25%)
Query: 67 AFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEH 124
+F PQ G TA +++ + S+ P+T+ G TN A+ L ++P L I
Sbjct: 96 SFAPQSG---------TAVELMAKTLRESSQPVTIVSTGPQTNVALLLNSHPELHTKIAR 146
Query: 125 IYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPV 184
I +MGGA+ +GN P AEFNI+ DP AA V SGIPV
Sbjct: 147 IVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAEIVFQSGIPV 184
Query: 185 TIIPLDAT 192
+ LD T
Sbjct: 185 VMAGLDVT 192
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 106/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + +K I S+ T+ V +L ++ R
Sbjct: 1 MALPIIIDCDPGHDDAIALVLSLASPE--LEVKAITSSAGNQTPEKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 PDIPV------AGGAVKPLM----------------RELIIADNVHGESGLDGPALP--- 93
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
E S A Q EL K++ ES +P +TI++ GP TN+A ++
Sbjct: 94 --EPSF---APQSGTAVELMA-------KTLRESSQP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+ I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHTKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHAADIERFR 206
>gi|303245956|ref|ZP_07332238.1| Inosine/uridine-preferring nucleoside hydrolase [Desulfovibrio
fructosovorans JJ]
gi|302492739|gb|EFL52607.1| Inosine/uridine-preferring nucleoside hydrolase [Desulfovibrio
fructosovorans JJ]
Length = 485
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 85/198 (42%), Gaps = 22/198 (11%)
Query: 74 RKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIR 133
+K APL A + +A+ P+T+ +G+ TN A+ + ++P L NI+ I M G
Sbjct: 86 KKGAPLPASDASWAMADALRQAPMTIVSLGAATNIAVLIASHPELVDNIQGIVAMAG--- 142
Query: 134 SDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
+ S E+ +G P P++ N +D A +L S +P+T P +
Sbjct: 143 ------SRSMPGEEF-IVG---PRQLRPFSALNFEADVEAWRIILESNVPLTFAPFSLSH 192
Query: 194 TIPVSENFFVEFERRQNT--YEAQYCFQSLKMIRDTWSGSPPFH------EAYCMWDSFM 245
I +++ E +T Y A Y ++ + D + GSP F+ Y + F
Sbjct: 193 QIWITKEDARSLENTGDTGSYLAPYMYKWAREWTDLY-GSPGFNPFDALAAGYLLAPGFF 251
Query: 246 AGVALSIMLNSSSHNGEN 263
GV L + + G N
Sbjct: 252 GGVELPVGILEPGERGNN 269
>gi|385205764|ref|ZP_10032634.1| Inosine-uridine nucleoside N-ribohydrolase [Burkholderia sp. Ch1-1]
gi|385185655|gb|EIF34929.1| Inosine-uridine nucleoside N-ribohydrolase [Burkholderia sp. Ch1-1]
Length = 367
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 59/135 (43%), Gaps = 23/135 (17%)
Query: 70 PQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYV 127
P G L+ A +I I P +T+ +G TN A +M P + I+ I
Sbjct: 143 PDGFAVSTKLQTQIAADFMIQTIKRYPNQVTILEVGPPTNLATAIMKAPEIVPLIKRIVY 202
Query: 128 MGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTII 187
MGGA+ P ++N E N + DP A TVL + IP +I
Sbjct: 203 MGGAMA---------------------VPGNANAVGELNWWFDPLAVRTVLQTSIPQAVI 241
Query: 188 PLDATKTIPVSENFF 202
PLD T T+P++++ +
Sbjct: 242 PLDVTDTVPLTQSVY 256
>gi|366053542|ref|ZP_09451264.1| ribonucleoside hydrolase RihC [Lactobacillus suebicus KCTC 3549]
Length = 303
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 58/122 (47%), Gaps = 24/122 (19%)
Query: 73 GRKYAPLRQPTAQQVLINAISAG--PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGG 130
G Y + +A + L + I A PIT+ GS+TN A+ P +KKNI+ I MGG
Sbjct: 92 GDDYGQPIEKSAVEALRDEILAADEPITLIPTGSYTNIALLFSQYPEVKKNIKEIIAMGG 151
Query: 131 AIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLD 190
+ S GN+ AEFN F+DP AA + SGIP+ ++ LD
Sbjct: 152 TL-----------------SEGNM-----TSAAEFNCFTDPHAAKIMYDSGIPIVMVGLD 189
Query: 191 AT 192
T
Sbjct: 190 IT 191
>gi|375000426|ref|ZP_09724766.1| inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Infantis str. SARB27]
gi|353075114|gb|EHB40874.1| inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Infantis str. SARB27]
Length = 311
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 48/100 (48%), Gaps = 22/100 (22%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
SA P+T+ G TN A+ L ++P L I I +MGGA+ +G
Sbjct: 115 SAQPVTIVSTGPQTNVALLLNSHPELHTKIARIVIMGGAM-----------------GLG 157
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
N P AEFNI+ DP AA V SGIPV + LD T
Sbjct: 158 NW-----TPAAEFNIYVDPEAAEIVFQSGIPVVMTGLDVT 192
Score = 46.6 bits (109), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 106/264 (40%), Gaps = 67/264 (25%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + +K I S+ T+ V +L ++ R
Sbjct: 1 MALPIIIDCDPGHDDAIALVLALASPE--LEVKAITSSAGNQTPEKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
+IPV A G V P L R+L
Sbjct: 59 PNIPV------AGGAVKP-----------------------------LMREL------II 77
Query: 525 AENSVRFGASQDNDDPELRQP-------LAVDVW-KSIVESIEPGSKITILTNGPLTNLA 576
A+N D P L +P AV++ K++ ES +P +TI++ GP TN+A
Sbjct: 78 ADN---VHGESGLDGPALPEPSFVPPNGTAVELMAKTLRESAQP---VTIVSTGPQTNVA 131
Query: 577 QIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ + I + I+GG G N + AEFN+++DP AA+ VF+S +
Sbjct: 132 LLLNSHPELHTKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGI 182
Query: 636 EIKLIPLHMQRRVASFFKILHKLR 659
+ + L + + + + R
Sbjct: 183 PVVMTGLDVTHKAQIHAADIERFR 206
>gi|339627399|ref|YP_004719042.1| inosine/uridine-preferring nucleoside hydrolase [Sulfobacillus
acidophilus TPY]
gi|379008225|ref|YP_005257676.1| inosine/uridine-preferring nucleoside hydrolase [Sulfobacillus
acidophilus DSM 10332]
gi|339285188|gb|AEJ39299.1| Inosine/uridine-preferring nucleoside hydrolase [Sulfobacillus
acidophilus TPY]
gi|361054487|gb|AEW06004.1| Inosine/uridine-preferring nucleoside hydrolase [Sulfobacillus
acidophilus DSM 10332]
Length = 315
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 76/179 (42%), Gaps = 28/179 (15%)
Query: 63 GLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKK 120
GL A LP RK P A Q + + A P +T+ + TN A L+ +P L
Sbjct: 86 GLGDAELPPVFRKPTPG---DAAQFIRETVRAHPGHMTIITVARLTNLARALLYDPELAP 142
Query: 121 NIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHS 180
I + VMGGA P + P AE NI+ DP AA VL +
Sbjct: 143 MIRQLVVMGGA---------------------AFCPGNVTPVAEANIWGDPEAAQLVLSA 181
Query: 181 GIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPFHEAYC 239
GIP ++ LD T ++ + VE RR N +Q +Q+ + + + P E +C
Sbjct: 182 GIPTILVGLDVTHQARLTRD-MVEGMRR-NDPASQLFYQATRFYLEAYRRISPVFEDWC 238
>gi|386017595|ref|YP_005935893.1| inosine-uridine preferring nucleoside hydrolase YeiK [Pantoea
ananatis AJ13355]
gi|327395675|dbj|BAK13097.1| inosine-uridine preferring nucleoside hydrolase YeiK [Pantoea
ananatis AJ13355]
Length = 253
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 31/172 (18%)
Query: 82 PTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNS 139
P A Q +I+++ A P IT+ +G TN A + P + ++ + +MGGA +D +
Sbjct: 44 PGAVQFIIDSVRASPGEITLVAIGPLTNIASAINQAPDIIPLVKELVMMGGAFGTDGHS- 102
Query: 140 TNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSE 199
GN+ P++EFNI+ DP AA VL S +P+ +IPLD T + +
Sbjct: 103 ------------GNV-----TPFSEFNIWKDPHAADQVLSSTLPIVVIPLDVTHNVLIHS 145
Query: 200 NFFVEFERRQNTYEAQYC--FQSLKMIRDTWSGSPPFHEA-----YCMWDSF 244
+ E +R C + + + ++ +SG H+ C+ D+F
Sbjct: 146 D---EVDRLHQPVLHAICRPYLAYSLEKEGFSGM-ALHDTLTISWLCLPDAF 193
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 76/144 (52%), Gaps = 18/144 (12%)
Query: 511 GLARDL---PRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIE--PGSKIT 565
G +R L P +P R E+ G + DN + P AV + I++S+ PG +IT
Sbjct: 10 GCSRPLAQAPSAPARLHGEDG--LGDAFDNPFSD-EAPGAV---QFIIDSVRASPG-EIT 62
Query: 566 ILTNGPLTNLAQIIG-LQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDP 624
++ GPLTN+A I + +++++ ++GG G D GNV + ++EFN++ DP
Sbjct: 63 LVAIGPLTNIASAINQAPDIIPLVKELVMMGGAFGTDGHSGNV-----TPFSEFNIWKDP 117
Query: 625 LAAKAVFESKLEIKLIPLHMQRRV 648
AA V S L I +IPL + V
Sbjct: 118 HAADQVLSSTLPIVVIPLDVTHNV 141
>gi|19111854|ref|NP_595062.1| uridine ribohydrolase (predicted) [Schizosaccharomyces pombe 972h-]
gi|74625264|sp|Q9P6J4.1|YHD6_SCHPO RecName: Full=Uncharacterized protein C1683.06c
gi|7801299|emb|CAB91168.1| uridine ribohydrolase (predicted) [Schizosaccharomyces pombe]
Length = 310
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 67/157 (42%), Gaps = 27/157 (17%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI---SAGPITVFVMGSHTNFAIFLM 113
+V+ G A LP RK + A +I+ + G IT+ +G TN A+ L
Sbjct: 78 HVHGASGFEGAVLPPPSRKE---NEGHAVDFIIDTLRNNEPGTITICTIGPLTNIALALN 134
Query: 114 NNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFA 173
P + + + I +M GA +GN+ P AEFNI+ DP A
Sbjct: 135 KAPEVIQRAKQIVMMAGAF----------------SEVGNI-----TPAAEFNIYVDPHA 173
Query: 174 AYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQN 210
A VL SGIP+ ++PLD T + S E N
Sbjct: 174 AQMVLSSGIPIVMMPLDITHQLHTSAKRIARMEALPN 210
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 62/112 (55%), Gaps = 8/112 (7%)
Query: 547 AVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGN 606
AVD + + EPG+ ITI T GPLTN+A + L + VIQ + G +E GN
Sbjct: 102 AVDFIIDTLRNNEPGT-ITICTIGPLTNIA--LALNKAPEVIQRAKQIVMMAGAFSEVGN 158
Query: 607 VFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKL 658
+ + AEFN+++DP AA+ V S + I ++PL + ++ + K + ++
Sbjct: 159 I-----TPAAEFNIYVDPHAAQMVLSSGIPIVMMPLDITHQLHTSAKRIARM 205
>gi|419929016|ref|ZP_14446713.1| ribonucleoside hydrolase 1 [Escherichia coli 541-1]
gi|388404410|gb|EIL64873.1| ribonucleoside hydrolase 1 [Escherichia coli 541-1]
Length = 311
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPE--PTFAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIP+ + LD T
Sbjct: 176 IVFQSGIPLVMAGLDVT 192
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAVKPLMREL----------------IIADNVHGESGLDGPALPEPT 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVELMA-------KTLRESAEP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPLVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHVEDTERFR 206
>gi|291619351|ref|YP_003522093.1| hypothetical protein PANA_3798 [Pantoea ananatis LMG 20103]
gi|386077470|ref|YP_005990995.1| inosine-uridine preferring nucleoside hydrolase YeiK [Pantoea
ananatis PA13]
gi|291154381|gb|ADD78965.1| YeiK [Pantoea ananatis LMG 20103]
gi|354986651|gb|AER30775.1| inosine-uridine preferring nucleoside hydrolase YeiK [Pantoea
ananatis PA13]
Length = 305
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 31/172 (18%)
Query: 82 PTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNS 139
P A Q +I+++ A P IT+ +G TN A + P + ++ + +MGGA +D +
Sbjct: 96 PGAVQFIIDSVRASPGEITLVAIGPLTNIASAINQAPDIIPLVKELVMMGGAFGTDGHS- 154
Query: 140 TNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSE 199
GN+ P++EFNI+ DP AA VL S +P+ +IPLD T + +
Sbjct: 155 ------------GNV-----TPFSEFNIWKDPHAADQVLSSTLPIVVIPLDVTHNVLIHS 197
Query: 200 NFFVEFERRQNTYEAQYC--FQSLKMIRDTWSGSPPFHEA-----YCMWDSF 244
+ E +R C + + + ++ +SG H+ C+ D+F
Sbjct: 198 D---EVDRLHQPVLHAICRPYLAYSLEKEGFSGM-ALHDTLTISWLCLPDAF 245
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 76/144 (52%), Gaps = 18/144 (12%)
Query: 511 GLARDL---PRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIE--PGSKIT 565
G +R L P +P R E+ G + DN + P AV + I++S+ PG +IT
Sbjct: 62 GCSRPLAQAPSAPARLHGEDG--LGDAFDNPFSD-EAPGAV---QFIIDSVRASPG-EIT 114
Query: 566 ILTNGPLTNLAQIIG-LQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDP 624
++ GPLTN+A I + +++++ ++GG G D GNV + ++EFN++ DP
Sbjct: 115 LVAIGPLTNIASAINQAPDIIPLVKELVMMGGAFGTDGHSGNV-----TPFSEFNIWKDP 169
Query: 625 LAAKAVFESKLEIKLIPLHMQRRV 648
AA V S L I +IPL + V
Sbjct: 170 HAADQVLSSTLPIVVIPLDVTHNV 193
>gi|82749950|ref|YP_415691.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus aureus RF122]
gi|82655481|emb|CAI79870.1| probable inosine-uridine preferring nucleoside hydrolase family
protein [Staphylococcus aureus RF122]
Length = 311
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 73/173 (42%), Gaps = 34/173 (19%)
Query: 78 PLRQPTA---QQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAI 132
P RQ A V+IN + S P+T+ G TN A L+ P + ++IE I +MGG
Sbjct: 97 PSRQAVAMPASDVIINKVMTSDTPVTIVATGPLTNIATALIREPRIAEHIESITLMGGG- 155
Query: 133 RSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
+ GN P AEFNI+ D AA V SGI + + LD T
Sbjct: 156 -----------------TFGNW-----TPTAEFNIWVDAEAAKRVFESGITINVFGLDVT 193
Query: 193 KTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWS-----GSPPFHEAYCM 240
+ ++ FE N AQ+ + L+ + T+ P H+A +
Sbjct: 194 HQVLADDHVIERFESINNPV-AQFVVELLQFFKKTYKTHFNMDGGPIHDACTI 245
Score = 45.8 bits (107), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 113/283 (39%), Gaps = 55/283 (19%)
Query: 405 MGKPVVFDIDMSAGDFLALIYL--LKLPVELINLKGILVSSTGWATSATVDVVYDLLHMM 462
M + ++ D D D +ALI + P+E++ I + + ++L ++
Sbjct: 1 MNRKIIMDCDPGHDDAIALILAGAIDSPLEIL---AITTVAGNQSVDKNTTNALNVLDII 57
Query: 463 GRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRR 522
GR DI V G P I +A I SG LD LP +P R
Sbjct: 58 GRQDIAVAKG---------ADRPLIKPAAFASEIHGESG--LD-------GPKLPSTPSR 99
Query: 523 YTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQ-IIGL 581
+ P + + ++ S P +TI+ GPLTN+A +I
Sbjct: 100 QA-----------------VAMPASDVIINKVMTSDTP---VTIVATGPLTNIATALIRE 139
Query: 582 QNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
+ I+ + ++GG GN + AEFN+++D AAK VFES + I +
Sbjct: 140 PRIAEHIESITLMGGGTF-----GN-----WTPTAEFNIWVDAEAAKRVFESGITINVFG 189
Query: 642 LHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSH 684
L + +V + ++ + + P + F LLQ ++H
Sbjct: 190 LDVTHQVLADDHVIERF-ESINNPVAQFVVELLQFFKKTYKTH 231
>gi|418326845|ref|ZP_12938022.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus
epidermidis VCU071]
gi|365224154|gb|EHM65420.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus
epidermidis VCU071]
Length = 302
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 37/186 (19%)
Query: 85 QQVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQ 144
+ +L+N + P+T+ +G TN AI L + P ++ I+ I +MGG+
Sbjct: 109 RNLLVN--TQEPLTLIAIGPLTNIAILLTSYPEVQPFIKEIVLMGGSTGR---------- 156
Query: 145 SEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVE 204
GN+ P AEFNI+ DP AA V +SG+P+T+I LD + + +F +
Sbjct: 157 -------GNV-----TPLAEFNIYCDPEAAQIVFNSGLPLTMIGLDLAREALFTHHFVKD 204
Query: 205 FERRQNTYEAQY-CFQSLKMIRDTWSGSPPFHEAYCMWDSFMAGVALSIMLNSSSHNGEN 263
F+ T Y FQ K S F + ++D F + +L+ + N +
Sbjct: 205 FKDTNATSSMLYNLFQHYK--------SEDFEIGFKLYDVF----TILYLLDPEAFNVKE 252
Query: 264 ACSEME 269
A +++E
Sbjct: 253 AYTQIE 258
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 15/138 (10%)
Query: 535 QDNDDPELRQPLAVDVWKSI-VESIEPGSKITILTNGPLTNLAQII-GLQNSSSVIQDVY 592
Q N D +L AV+ +++ V + EP +T++ GPLTN+A ++ I+++
Sbjct: 93 QINQD-DLTSIHAVEAMRNLLVNTQEP---LTLIAIGPLTNIAILLTSYPEVQPFIKEIV 148
Query: 593 IVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFF 652
++GG+ G +GNV + AEFN++ DP AA+ VF S L + +I L + R
Sbjct: 149 LMGGSTG----RGNV-----TPLAEFNIYCDPEAAQIVFNSGLPLTMIGLDLAREALFTH 199
Query: 653 KILHKLRDRKKTPESVFS 670
+ +D T +++
Sbjct: 200 HFVKDFKDTNATSSMLYN 217
>gi|21281948|ref|NP_645034.1| hypothetical protein MW0219 [Staphylococcus aureus subsp. aureus
MW2]
gi|49485120|ref|YP_042341.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus MSSA476]
gi|57652502|ref|YP_185123.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus COL]
gi|87160218|ref|YP_492951.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus USA300_FPR3757]
gi|88194019|ref|YP_498806.1| hypothetical protein SAOUHSC_00211 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|151220390|ref|YP_001331213.1| hypothetical protein NWMN_0178 [Staphylococcus aureus subsp. aureus
str. Newman]
gi|161508504|ref|YP_001574163.1| purine nucleosidase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|258451673|ref|ZP_05699699.1| conserved hypothetical protein [Staphylococcus aureus A5948]
gi|262051093|ref|ZP_06023318.1| hypothetical protein SA930_0674 [Staphylococcus aureus 930918-3]
gi|282915564|ref|ZP_06323336.1| purine nucleosidase [Staphylococcus aureus subsp. aureus D139]
gi|282926018|ref|ZP_06333665.1| purine nucleosidase [Staphylococcus aureus A9765]
gi|283767976|ref|ZP_06340891.1| purine nucleosidase [Staphylococcus aureus subsp. aureus H19]
gi|284023249|ref|ZP_06377647.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus 132]
gi|294849170|ref|ZP_06789914.1| purine nucleosidase [Staphylococcus aureus A9754]
gi|297209250|ref|ZP_06925649.1| purine nucleosidase [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|300911248|ref|ZP_07128697.1| purine nucleosidase [Staphylococcus aureus subsp. aureus TCH70]
gi|379013555|ref|YP_005289791.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus VC40]
gi|379020029|ref|YP_005296691.1| Inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus M013]
gi|415686631|ref|ZP_11450678.1| purine nucleosidase [Staphylococcus aureus subsp. aureus CGS01]
gi|417648010|ref|ZP_12297840.1| cytidine/uridine-specific hydrolase [Staphylococcus aureus subsp.
aureus 21189]
gi|418285579|ref|ZP_12898248.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus 21209]
gi|418319631|ref|ZP_12931007.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus 21232]
gi|418320737|ref|ZP_12932091.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus VCU006]
gi|418561615|ref|ZP_13126100.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus 21262]
gi|418571595|ref|ZP_13135825.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus 21283]
gi|418578137|ref|ZP_13142235.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIG1114]
gi|418641551|ref|ZP_13203759.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus IS-24]
gi|418647473|ref|ZP_13209538.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus IS-88]
gi|418649975|ref|ZP_13212002.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus IS-91]
gi|418658216|ref|ZP_13219956.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus IS-111]
gi|418874271|ref|ZP_13428542.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIGC93]
gi|418902508|ref|ZP_13456552.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIG1770]
gi|418910839|ref|ZP_13464824.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIG547]
gi|418924670|ref|ZP_13478575.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIG2018]
gi|418927530|ref|ZP_13481419.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIG1612]
gi|418933227|ref|ZP_13487053.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIGC128]
gi|418950908|ref|ZP_13503042.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus IS-160]
gi|418987201|ref|ZP_13534876.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIG1835]
gi|419773065|ref|ZP_14299079.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus CO-23]
gi|422744460|ref|ZP_16798426.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus MRSA177]
gi|422745205|ref|ZP_16799149.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus MRSA131]
gi|440707978|ref|ZP_20888657.1| putative cytidine/uridine-specific hydrolase [Staphylococcus aureus
subsp. aureus 21282]
gi|440736252|ref|ZP_20915853.1| purine nucleosidase [Staphylococcus aureus subsp. aureus DSM 20231]
gi|448741383|ref|ZP_21723348.1| cytidine/uridine-specific hydrolase [Staphylococcus aureus
KT/314250]
gi|21203383|dbj|BAB94084.1| MW0219 [Staphylococcus aureus subsp. aureus MW2]
gi|49243563|emb|CAG41987.1| putative inosine-uridine preferring nucleoside hydrolase
[Staphylococcus aureus subsp. aureus MSSA476]
gi|57286688|gb|AAW38782.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus COL]
gi|87126192|gb|ABD20706.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus USA300_FPR3757]
gi|87201577|gb|ABD29387.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|150373190|dbj|BAF66450.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
str. Newman]
gi|160367313|gb|ABX28284.1| purine nucleosidase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|257860721|gb|EEV83543.1| conserved hypothetical protein [Staphylococcus aureus A5948]
gi|259160996|gb|EEW46015.1| hypothetical protein SA930_0674 [Staphylococcus aureus 930918-3]
gi|282320667|gb|EFB51005.1| purine nucleosidase [Staphylococcus aureus subsp. aureus D139]
gi|282592372|gb|EFB97387.1| purine nucleosidase [Staphylococcus aureus A9765]
gi|283461855|gb|EFC08939.1| purine nucleosidase [Staphylococcus aureus subsp. aureus H19]
gi|294824062|gb|EFG40487.1| purine nucleosidase [Staphylococcus aureus A9754]
gi|296886183|gb|EFH25117.1| purine nucleosidase [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|300887427|gb|EFK82623.1| purine nucleosidase [Staphylococcus aureus subsp. aureus TCH70]
gi|315198325|gb|EFU28655.1| purine nucleosidase [Staphylococcus aureus subsp. aureus CGS01]
gi|320141560|gb|EFW33401.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus MRSA131]
gi|320142311|gb|EFW34126.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus MRSA177]
gi|329731674|gb|EGG68034.1| cytidine/uridine-specific hydrolase [Staphylococcus aureus subsp.
aureus 21189]
gi|359829338|gb|AEV77316.1| Inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus M013]
gi|365169678|gb|EHM60922.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus 21209]
gi|365226527|gb|EHM67743.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus VCU006]
gi|365240104|gb|EHM80888.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus 21232]
gi|371977099|gb|EHO94378.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus 21262]
gi|371979930|gb|EHO97154.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus 21283]
gi|374362252|gb|AEZ36357.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus VC40]
gi|375018856|gb|EHS12425.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus IS-24]
gi|375029195|gb|EHS22525.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus IS-91]
gi|375030332|gb|EHS23655.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus IS-88]
gi|375039175|gb|EHS32115.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus IS-111]
gi|375375137|gb|EHS78741.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus IS-160]
gi|377700019|gb|EHT24365.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIG1114]
gi|377720616|gb|EHT44771.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIG1835]
gi|377726706|gb|EHT50816.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIG547]
gi|377740086|gb|EHT64085.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIG1612]
gi|377745861|gb|EHT69837.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIG1770]
gi|377747874|gb|EHT71838.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIG2018]
gi|377772643|gb|EHT96390.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIGC93]
gi|377773401|gb|EHT97147.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIGC128]
gi|383973238|gb|EID89256.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus CO-23]
gi|436430019|gb|ELP27383.1| purine nucleosidase [Staphylococcus aureus subsp. aureus DSM 20231]
gi|436505388|gb|ELP41300.1| putative cytidine/uridine-specific hydrolase [Staphylococcus aureus
subsp. aureus 21282]
gi|445547818|gb|ELY16079.1| cytidine/uridine-specific hydrolase [Staphylococcus aureus
KT/314250]
Length = 311
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 73/173 (42%), Gaps = 34/173 (19%)
Query: 78 PLRQPTA---QQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAI 132
P RQ A V+IN + S P+T+ G TN A L+ P + ++IE I +MGG
Sbjct: 97 PSRQAVAMPASDVIINKVMTSDTPVTIVATGPLTNVATALIREPRIAEHIESITLMGGG- 155
Query: 133 RSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
+ GN P AEFNI+ D AA V SGI + + LD T
Sbjct: 156 -----------------TFGNW-----TPTAEFNIWVDAEAAKRVFESGITINVFGLDVT 193
Query: 193 KTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWS-----GSPPFHEAYCM 240
+ ++ FE N AQ+ + L+ + T+ P H+A +
Sbjct: 194 HQVLADDHVIERFESINNPV-AQFVVELLQFFKKTYKTHFNMDGGPIHDACTI 245
Score = 46.6 bits (109), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 114/283 (40%), Gaps = 55/283 (19%)
Query: 405 MGKPVVFDIDMSAGDFLALIYL--LKLPVELINLKGILVSSTGWATSATVDVVYDLLHMM 462
M + ++ D D D +ALI + P+E++ + + + + ++L +M
Sbjct: 1 MKRKIIMDCDPGHDDAIALILAGAIDSPLEILAVTTV---AGNQSVDKNTTNALNVLDIM 57
Query: 463 GRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRR 522
GR DI V G P I +A I SG LD LP +P R
Sbjct: 58 GRQDIAVAKG---------ADRPLIKPAAFASEIHGESG--LD-------GPKLPSTPSR 99
Query: 523 YTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQ-IIGL 581
+ P + + ++ S P +TI+ GPLTN+A +I
Sbjct: 100 QA-----------------VAMPASDVIINKVMTSDTP---VTIVATGPLTNVATALIRE 139
Query: 582 QNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
+ I+ + ++GG GN + AEFN+++D AAK VFES + I +
Sbjct: 140 PRIAEHIESITLMGGGTF-----GN-----WTPTAEFNIWVDAEAAKRVFESGITINVFG 189
Query: 642 LHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSH 684
L + +V + ++ + + P + F LLQ ++H
Sbjct: 190 LDVTHQVLADDHVIERF-ESINNPVAQFVVELLQFFKKTYKTH 231
>gi|331682068|ref|ZP_08382692.1| cytidine/uridine-specific hydrolase [Escherichia coli H299]
gi|432615470|ref|ZP_19851601.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE75]
gi|450186090|ref|ZP_21889392.1| ribonucleoside hydrolase 1 [Escherichia coli SEPT362]
gi|331080747|gb|EGI51921.1| cytidine/uridine-specific hydrolase [Escherichia coli H299]
gi|431157336|gb|ELE57980.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE75]
gi|449324670|gb|EMD14595.1| ribonucleoside hydrolase 1 [Escherichia coli SEPT362]
Length = 311
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 78/194 (40%), Gaps = 58/194 (29%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQRLYVNT 60
++NR DIPV G ++ N I +V G
Sbjct: 55 LLNRTDIPVAGGAVKPLMRNLIIADNVHG------------------------------- 83
Query: 61 NYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHL 118
GL LP+ +AP + TA +++ + S PIT+ G TN A+ L ++P L
Sbjct: 84 ESGLDGPALPE--PTFAP-QNCTAVELMAKTLCESEEPITIVSTGPQTNVALLLNSHPEL 140
Query: 119 KKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVL 178
I I +MGGA+ +GN P AEFNI+ DP AA V
Sbjct: 141 HSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAEIVF 178
Query: 179 HSGIPVTIIPLDAT 192
SGIPV + LD T
Sbjct: 179 QSGIPVVMAGLDVT 192
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 106/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAVKPLM----------------RNLIIADNVHGESGLDGPALPEPT 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES EP ITI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVELMA-------KTLCESEEP---ITIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHVEDTERFR 206
>gi|300172325|ref|YP_003771490.1| Nonspecific ribonucleoside hydrolase [Leuconostoc gasicomitatum LMG
18811]
gi|333447065|ref|ZP_08482007.1| ribonucleoside hydrolase RihC [Leuconostoc inhae KCTC 3774]
gi|299886703|emb|CBL90671.1| Nonspecific ribonucleoside hydrolase [Leuconostoc gasicomitatum LMG
18811]
Length = 310
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 64/142 (45%), Gaps = 26/142 (18%)
Query: 96 PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY 155
P+T+ GS+TN A+ + N+P L I+ +MGG++ GN+
Sbjct: 117 PMTIVATGSYTNIALLIQNHPELISQIKEFVLMGGSLSG-----------------GNV- 158
Query: 156 PDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQ 215
+ AEFNIF+DP AA V SGIP+ +I LD T +S + + N EA
Sbjct: 159 ----SSVAEFNIFTDPDAAAVVFKSGIPIVMIGLDVTLKALLSLD---TIDAVANIGEAG 211
Query: 216 YCFQSLKMIR-DTWSGSPPFHE 236
L D+ G P H+
Sbjct: 212 NMLHKLMTAYGDSEPGGKPMHD 233
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 17/99 (17%)
Query: 552 KSIVESIEPGSKITILTNGPLTNLAQIIGLQNSS---SVIQDVYIVGGNKGQDNEKGNVF 608
K + E+ EP +TI+ G TN+A +I QN S I++ ++GG+ GNV
Sbjct: 109 KVLSEAPEP---MTIVATGSYTNIALLI--QNHPELISQIKEFVLMGGSL----SGGNV- 158
Query: 609 TVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
S AEFN+F DP AA VF+S + I +I L + +
Sbjct: 159 ----SSVAEFNIFTDPDAAAVVFKSGIPIVMIGLDVTLK 193
>gi|298368947|ref|ZP_06980265.1| inosine-uridine preferring nucleoside hydrolase [Neisseria sp. oral
taxon 014 str. F0314]
gi|298282950|gb|EFI24437.1| inosine-uridine preferring nucleoside hydrolase [Neisseria sp. oral
taxon 014 str. F0314]
Length = 317
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 85/207 (41%), Gaps = 44/207 (21%)
Query: 77 APLRQPTAQQVLINAISA---GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIR 133
PL+ A LI A+ G IT+ +G TN A+ P + +++I +MGG
Sbjct: 102 CPLQSVHAVDYLIRALRGAERGSITLCPIGPLTNIALAFSLAPDIADAVKNIVLMGG--- 158
Query: 134 SDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
C+ GN+ P AEFN + DP AA VL SG P+TI+PLD T
Sbjct: 159 --CYFEA-----------GNI-----TPCAEFNFYVDPHAAQIVLQSGAPITILPLDVTH 200
Query: 194 TIPVSENFFVEFERRQN-----------TYEAQYCFQSLKMIRDTWSGSP---PFHEAYC 239
++ R N +YE +Y Q+ + G P P A+
Sbjct: 201 KAQITTPRMDMLRRLGNVNGPRLADILQSYE-RYDIQAFGL-----EGGPLHDPCAVAFA 254
Query: 240 MWDSFMAGVALSIMLNSSSHNGENACS 266
++ G A + +++ S ACS
Sbjct: 255 VFPELFRGKACRVDVDTQSELSLGACS 281
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 12/112 (10%)
Query: 539 DPE--LRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVG 595
DPE L+ AVD + E GS IT+ GPLTN+A L + + ++++ ++G
Sbjct: 99 DPECPLQSVHAVDYLIRALRGAERGS-ITLCPIGPLTNIALAFSLAPDIADAVKNIVLMG 157
Query: 596 GNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
G E GN+ + AEFN ++DP AA+ V +S I ++PL + +
Sbjct: 158 GCY---FEAGNI-----TPCAEFNFYVDPHAAQIVLQSGAPITILPLDVTHK 201
>gi|420194276|ref|ZP_14700092.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIHLM021]
gi|394265069|gb|EJE09733.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIHLM021]
Length = 302
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 37/186 (19%)
Query: 85 QQVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQ 144
+ +L+N + P+T+ +G TN AI L + P ++ I+ I +MGG+
Sbjct: 109 RNLLVN--TQEPLTLIAIGPLTNIAILLTSYPEVQPFIKEIVLMGGSTGR---------- 156
Query: 145 SEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVE 204
GN+ P AEFNI+ DP AA V +SG+P+T+I LD + + +F +
Sbjct: 157 -------GNV-----TPLAEFNIYCDPEAAQIVFNSGLPLTMIGLDLAREALFTHHFVKD 204
Query: 205 FERRQNTYEAQY-CFQSLKMIRDTWSGSPPFHEAYCMWDSFMAGVALSIMLNSSSHNGEN 263
F+ T Y FQ K S F + ++D F + +L+ + N +
Sbjct: 205 FKDTNATSNMLYNLFQHYK--------SEDFEIGFKLYDVF----TILYLLDPEAFNVKE 252
Query: 264 ACSEME 269
A +++E
Sbjct: 253 AYTQIE 258
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 15/138 (10%)
Query: 535 QDNDDPELRQPLAVDVWKSI-VESIEPGSKITILTNGPLTNLAQII-GLQNSSSVIQDVY 592
Q N D +L AV+ +++ V + EP +T++ GPLTN+A ++ I+++
Sbjct: 93 QINQD-DLTSIHAVEAMRNLLVNTQEP---LTLIAIGPLTNIAILLTSYPEVQPFIKEIV 148
Query: 593 IVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFF 652
++GG+ G +GNV + AEFN++ DP AA+ VF S L + +I L + R
Sbjct: 149 LMGGSTG----RGNV-----TPLAEFNIYCDPEAAQIVFNSGLPLTMIGLDLAREALFTH 199
Query: 653 KILHKLRDRKKTPESVFS 670
+ +D T +++
Sbjct: 200 HFVKDFKDTNATSNMLYN 217
>gi|91779354|ref|YP_554562.1| putative inosine-uridine preferring nucleoside hydrolase
[Burkholderia xenovorans LB400]
gi|91692014|gb|ABE35212.1| putative inosine-uridine preferring nucleoside hydrolase
[Burkholderia xenovorans LB400]
Length = 321
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 20/134 (14%)
Query: 77 APLRQPTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
APL A + +I+ + A P +T+ +G TN A+ L +P + ++ + +MGGA +
Sbjct: 99 APLDARPAHRFIIDTVRAHPGEVTLLAVGPLTNLALALAGDPQIAPLVKQVVIMGGAFGT 158
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKT 194
D +GN+ P AE NI DP AA V + PV I+ LD T+
Sbjct: 159 DGV-------------LGNV-----TPAAEANILGDPDAADIVFGAAWPVAIVGLDVTQR 200
Query: 195 IPVSENFFVEFERR 208
+S ++ R
Sbjct: 201 TIMSHDYLASLRAR 214
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 9/113 (7%)
Query: 552 KSIVESIE--PGSKITILTNGPLTNLA-QIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVF 608
+ I++++ PG ++T+L GPLTNLA + G + +++ V I+GG G D GNV
Sbjct: 108 RFIIDTVRAHPG-EVTLLAVGPLTNLALALAGDPQIAPLVKQVVIMGGAFGTDGVLGNV- 165
Query: 609 TVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDR 661
+ AE N+ DP AA VF + + ++ L + +R L LR R
Sbjct: 166 ----TPAAEANILGDPDAADIVFGAAWPVAIVGLDVTQRTIMSHDYLASLRAR 214
>gi|378765211|ref|YP_005193670.1| inosine/uridine-preferring nucleoside hydrolase [Pantoea ananatis
LMG 5342]
gi|365184683|emb|CCF07633.1| inosine/uridine-preferring nucleoside hydrolase [Pantoea ananatis
LMG 5342]
Length = 305
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 31/172 (18%)
Query: 82 PTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNS 139
P A Q +I+++ A P IT+ +G TN A + P + ++ + +MGGA +D +
Sbjct: 96 PGAVQFIIDSVRASPGEITLVAIGPLTNIASAINQAPDIIPLVKELVMMGGAFGTDGHS- 154
Query: 140 TNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSE 199
GN+ P++EFNI+ DP AA VL S +P+ +IPLD T + +
Sbjct: 155 ------------GNV-----TPFSEFNIWKDPHAADQVLSSTLPIVVIPLDVTHNVLIHS 197
Query: 200 NFFVEFERRQNTYEAQYC--FQSLKMIRDTWSGSPPFHEA-----YCMWDSF 244
+ E +R C + + + ++ +SG H+ C+ D+F
Sbjct: 198 D---EVDRLHQPVLHAICRPYLAYSLEKEGFSGM-ALHDTLTISWLCLPDAF 245
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 76/144 (52%), Gaps = 18/144 (12%)
Query: 511 GLARDL---PRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIE--PGSKIT 565
G +R L P +P R E+ G + DN + P AV + I++S+ PG +IT
Sbjct: 62 GCSRPLALAPSAPARLHGEDG--LGDAFDNPFSD-EAPGAV---QFIIDSVRASPG-EIT 114
Query: 566 ILTNGPLTNLAQIIG-LQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDP 624
++ GPLTN+A I + +++++ ++GG G D GNV + ++EFN++ DP
Sbjct: 115 LVAIGPLTNIASAINQAPDIIPLVKELVMMGGAFGTDGHSGNV-----TPFSEFNIWKDP 169
Query: 625 LAAKAVFESKLEIKLIPLHMQRRV 648
AA V S L I +IPL + V
Sbjct: 170 HAADQVLSSTLPIVVIPLDVTHNV 193
>gi|168236648|ref|ZP_02661706.1| inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
gi|194735506|ref|YP_002113772.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|204930524|ref|ZP_03221454.1| inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Javiana str.
GA_MM04042433]
gi|416554639|ref|ZP_11758370.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 29N]
gi|452121114|ref|YP_007471362.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Javiana str. CFSAN001992]
gi|226739287|sp|B4TPY1.1|RIHA_SALSV RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|194711008|gb|ACF90229.1| inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|197290418|gb|EDY29774.1| inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
gi|204320458|gb|EDZ05661.1| inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Javiana str.
GA_MM04042433]
gi|363561042|gb|EHL45172.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 29N]
gi|451910118|gb|AGF81924.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Javiana str. CFSAN001992]
Length = 311
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 59/128 (46%), Gaps = 33/128 (25%)
Query: 67 AFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEH 124
+F PQ G TA +++ + S+ P+T+ G TN A+ L ++P L I
Sbjct: 96 SFAPQSG---------TAVELMAKTLRESSQPVTIVSTGPQTNVALLLNSHPELHTKIAR 146
Query: 125 IYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPV 184
I +MGGA+ +GN P AEFNI+ DP AA V SGIPV
Sbjct: 147 IVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAEIVFQSGIPV 184
Query: 185 TIIPLDAT 192
+ LD T
Sbjct: 185 VMAGLDVT 192
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 106/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + +K I S+ T+ V +L ++ R
Sbjct: 1 MALPIIIDCDPGHDDAIALVLALASPE--LEVKAITSSAGNQTPDKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 PDIPV------AGGAVKPLM----------------RELIIADNVHGESGLDGPALP--- 93
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
E S A Q EL K++ ES +P +TI++ GP TN+A ++
Sbjct: 94 --EPSF---APQSGTAVELMA-------KTLRESSQP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+ I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHTKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHAADIERFR 206
>gi|418844184|ref|ZP_13398976.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
gi|418860942|ref|ZP_13415515.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19470]
gi|418864396|ref|ZP_13418925.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19536]
gi|392815004|gb|EJA70948.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
gi|392825585|gb|EJA81324.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19470]
gi|392830677|gb|EJA86324.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19536]
Length = 311
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 59/128 (46%), Gaps = 33/128 (25%)
Query: 67 AFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEH 124
+F PQ G TA +++ + S+ P+T+ G TN A+ L ++P L I
Sbjct: 96 SFAPQSG---------TAVELMAKTLRESSQPVTIVSTGPQTNVALLLNSHPELHTKIAR 146
Query: 125 IYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPV 184
I +MGGA+ +GN P AEFNI+ DP AA V SGIPV
Sbjct: 147 IVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAEIVFQSGIPV 184
Query: 185 TIIPLDAT 192
+ LD T
Sbjct: 185 VMAGLDVT 192
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 112/271 (41%), Gaps = 53/271 (19%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + +K I S+ T+ V +L ++ R
Sbjct: 1 MALPIIIDCDPGHDDAIALVLALASPE--LEVKAITSSAGNQTPEKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 PDIPV------AGGAVKPLM----------------RELIIADNVHGESGLDGPALP--- 93
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
E S A Q EL K++ ES +P +TI++ GP TN+A ++
Sbjct: 94 --EPSF---APQSGTAVELMA-------KTLRESSQP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+ I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHTKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLRDRKKTPESVFSQRL 673
+ + + + RD ++ ++ L
Sbjct: 190 DVTHKAQIHAADIERFRDIGNPISTIVAELL 220
>gi|197251547|ref|YP_002145637.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|440762180|ref|ZP_20941245.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Agona str. SH11G1113]
gi|440768927|ref|ZP_20947890.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Agona str. SH08SF124]
gi|440772281|ref|ZP_20951186.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Agona str. SH10GFN094]
gi|226739280|sp|B5EZA2.1|RIHA_SALA4 RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|197215250|gb|ACH52647.1| inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|436416091|gb|ELP14003.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Agona str. SH08SF124]
gi|436418765|gb|ELP16646.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Agona str. SH10GFN094]
gi|436424129|gb|ELP21917.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Agona str. SH11G1113]
Length = 311
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 59/128 (46%), Gaps = 33/128 (25%)
Query: 67 AFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEH 124
+F PQ G TA +++ + S+ P+T+ G TN A+ L ++P L I
Sbjct: 96 SFAPQSG---------TAVELMAKTLRESSQPVTIVSTGPQTNVALLLNSHPELHAKIAR 146
Query: 125 IYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPV 184
I +MGGA+ +GN P AEFNI+ DP AA V SGIPV
Sbjct: 147 IVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAEIVFQSGIPV 184
Query: 185 TIIPLDAT 192
+ LD T
Sbjct: 185 VMAGLDVT 192
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 106/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + +K I S+ T+ V +L ++ R
Sbjct: 1 MALPIIIDCDPGHDDAIALVLALASPE--LEVKAITSSAGNQTPEKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 PDIPV------AGGAVKPLM----------------RELIIADNVHGESGLDGPALP--- 93
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
E S A Q EL K++ ES +P +TI++ GP TN+A ++
Sbjct: 94 --EPSF---APQSGTAVELMA-------KTLRESSQP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+ I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHAKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHAADIERFR 206
>gi|417902832|ref|ZP_12546697.1| cytidine/uridine-specific hydrolase [Staphylococcus aureus subsp.
aureus 21266]
gi|418314486|ref|ZP_12925959.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus 21334]
gi|341842808|gb|EGS84043.1| cytidine/uridine-specific hydrolase [Staphylococcus aureus subsp.
aureus 21266]
gi|365233184|gb|EHM74141.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus 21334]
Length = 311
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 73/173 (42%), Gaps = 34/173 (19%)
Query: 78 PLRQPTA---QQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAI 132
P RQ A V+IN + S P+T+ G TN A L+ P + ++IE I +MGG
Sbjct: 97 PSRQAVAMPASDVIINKVMTSDTPVTIVATGPLTNVATALIREPRIAEHIESITLMGGG- 155
Query: 133 RSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
+ GN P AEFNI+ D AA V SGI + + LD T
Sbjct: 156 -----------------TFGNW-----TPTAEFNIWVDAEAAKRVFESGITINVFGLDVT 193
Query: 193 KTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWS-----GSPPFHEAYCM 240
+ ++ FE N AQ+ + L+ + T+ P H+A +
Sbjct: 194 HQVLADDHVIERFESINNPV-AQFVVELLQFFKKTYKTHFNMDGGPIHDACTI 245
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 114/283 (40%), Gaps = 55/283 (19%)
Query: 405 MGKPVVFDIDMSAGDFLALIYL--LKLPVELINLKGILVSSTGWATSATVDVVYDLLHMM 462
M + ++ D D D +ALI + P+E++ + + + + ++L +M
Sbjct: 1 MKRKIIMDCDPGHDDAIALILAGAIDSPLEILAVTTV---AGNQSVDKNTTNALNVLDIM 57
Query: 463 GRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRR 522
GR DI V G P I +A I SG LD LP +P R
Sbjct: 58 GRQDIAVAKG---------ADRPLIKPAAFASEIHGESG--LD-------GPKLPSTPSR 99
Query: 523 YTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQ-IIGL 581
+ P + + ++ S P +TI+ GPLTN+A +I
Sbjct: 100 QA-----------------VAMPASDVIINKVMTSDTP---VTIVATGPLTNVATALIRE 139
Query: 582 QNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
+ I+ + ++GG GN + AEFN+++D AAK VFES + I +
Sbjct: 140 PRIAEHIESITLMGGGTF-----GN-----WTPTAEFNIWVDAEAAKRVFESGITINVFG 189
Query: 642 LHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSH 684
L + +V + ++ + + P + F LLQ ++H
Sbjct: 190 LDVTHQVLADDHVIERF-ESINNPVAQFVVELLQFFKKTYKTH 231
>gi|167550801|ref|ZP_02344557.1| inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA29]
gi|205324200|gb|EDZ12039.1| inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA29]
Length = 311
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 59/128 (46%), Gaps = 33/128 (25%)
Query: 67 AFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEH 124
+F PQ G TA +++ + S+ P+T+ G TN A+ L ++P L I
Sbjct: 96 SFAPQSG---------TAVELMAKTLRESSQPVTIVSTGPQTNVALLLNSHPELHTKIAR 146
Query: 125 IYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPV 184
I +MGGA+ +GN P AEFNI+ DP AA V SGIPV
Sbjct: 147 IVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAEIVFQSGIPV 184
Query: 185 TIIPLDAT 192
+ LD T
Sbjct: 185 VMAGLDVT 192
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 111/271 (40%), Gaps = 53/271 (19%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + K I S+ T+ V +L ++ R
Sbjct: 1 MALPIIIDCDPGHDDAIALVLALASPE--LEAKAITSSAGNQTPEKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 PDIPV------AGGAVKPLM----------------RELIIADNVHGESGLDGPALP--- 93
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
E S A Q EL K++ ES +P +TI++ GP TN+A ++
Sbjct: 94 --EPSF---APQSGTAVELMA-------KTLRESSQP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+ I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHTKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLRDRKKTPESVFSQRL 673
+ + + + RD ++ ++ L
Sbjct: 190 DVTHKAQIHAADIERFRDIGNPISTIVAELL 220
>gi|227508941|ref|ZP_03938990.1| ribosylpyrimidine nucleosidase [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227191618|gb|EEI71685.1| ribosylpyrimidine nucleosidase [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 311
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 64/137 (46%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL A LP K + TA +++ I S +T+ V G TN AIFL
Sbjct: 81 VHGKSGLDGAELPDPDFKP---QNMTAIELMAKTIQESNEKVTLVVTGPMTNAAIFLRVY 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L IE I MGGA+ +GN P EFNIF DP AA
Sbjct: 138 PELTNKIERIVFMGGAM-----------------GLGNW-----TPSVEFNIFVDPEAAK 175
Query: 176 TVLHSGIPVTIIPLDAT 192
VL++GIP+T+ PL+ T
Sbjct: 176 IVLNAGIPLTMAPLNVT 192
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 102/245 (41%), Gaps = 53/245 (21%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M ++ D D D LA++ + P I+L + S+ T++ +L +M
Sbjct: 1 MMTKIILDCDPGHDDALAMMMAIASPK--IDLAAVTTSAGNQTPDKTLNNAMRMLTLMKH 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
++IPV GG PL + G + + GL
Sbjct: 59 EEIPVA-----------------GGNHTPLVKPLETAGNVHGKS--GLD----------- 88
Query: 525 AENSVRFGASQDNDDPELRQPLAVDVW-KSIVESIEPGSKITILTNGPLTNLAQIIGL-Q 582
GA + D + + A+++ K+I ES E K+T++ GP+TN A + +
Sbjct: 89 -------GAELPDPDFKPQNMTAIELMAKTIQESNE---KVTLVVTGPMTNAAIFLRVYP 138
Query: 583 NSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
++ I+ + +GG G N +V EFN+F+DP AAK V + + + + PL
Sbjct: 139 ELTNKIERIVFMGGAMGLGNWTPSV---------EFNIFVDPEAAKIVLNAGIPLTMAPL 189
Query: 643 HMQRR 647
++ +
Sbjct: 190 NVTHK 194
>gi|398814153|ref|ZP_10572836.1| Inosine-uridine nucleoside N-ribohydrolase [Brevibacillus sp. BC25]
gi|398037097|gb|EJL30299.1| Inosine-uridine nucleoside N-ribohydrolase [Brevibacillus sp. BC25]
Length = 313
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 93/228 (40%), Gaps = 33/228 (14%)
Query: 25 PDVGGYQPIIDQ---GMSTAGECRYRQAIPVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQ 81
P + + IID+ G E R P + ++ Y FL + G P+
Sbjct: 45 PAMFASRKIIDRFGNGGLDVAESNSRGKNPFPKDWRMHAFYVDALPFLNESGEVITPVAD 104
Query: 82 PTAQQVLINAISA--GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNS 139
A +I + A G T+ G T+ A L +P +++ +E + MGG R +
Sbjct: 105 KPAHLHIIETLRATEGKTTLLFTGPLTDLARALDIDPTIEEKVERLVWMGGTFREE---- 160
Query: 140 TNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSE 199
GN++ + + AE+N+F DP AA V SG+ + ++ L++T +P++
Sbjct: 161 ------------GNVHEPEHDGTAEWNVFWDPEAAARVWESGMEIDLVALESTNQVPLTL 208
Query: 200 NFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPF-----HEAYCMWD 242
+ + + + + Q M+ PP + Y +WD
Sbjct: 209 DVRERWAKERKHIGVDFLGQCYAMV-------PPLVHFSTNSTYYLWD 249
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 98/209 (46%), Gaps = 13/209 (6%)
Query: 554 IVESIEPGS-KITILTNGPLTNLAQIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVP 611
I+E++ K T+L GPLT+LA+ + + + ++ + +GG E+GNV
Sbjct: 111 IIETLRATEGKTTLLFTGPLTDLARALDIDPTIEEKVERLVWMGGTF---REEGNVHEPE 167
Query: 612 SSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQ 671
AE+N+F DP AA V+ES +EI L+ L +V + + +K F
Sbjct: 168 HDGTAEWNVFWDPEAAARVWESGMEIDLVALESTNQVPLTLDVRERWAKERKHIGVDF-- 225
Query: 672 RLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKSLEIISDGDISKVGQ 731
L Q + H + +L +VL + GN L + + S+ +I++G + G+
Sbjct: 226 -LGQCYAMVPPLVHFSTNSTYYLWDVLTTAFV-GNSDLVKVQTVNSI-VITEG--ASQGR 280
Query: 732 IIVNQEQGKLVKVLESLNVAVYYDHFAEV 760
V G+ V V+ ++ ++D+ ++
Sbjct: 281 -TVETADGRPVHVVYDVDRDAFFDYMTDL 308
>gi|354722536|ref|ZP_09036751.1| ribonucleoside hydrolase 1 [Enterobacter mori LMG 25706]
Length = 313
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 49/100 (49%), Gaps = 22/100 (22%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
SA P+T+ G TN A+ L ++P L I I +MGGA+ ++G
Sbjct: 115 SAEPVTLVATGPQTNVALLLNSHPELHGKIARIVMMGGAM-----------------ALG 157
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
N P AEFNIF DP AA V SG+P+ + LD T
Sbjct: 158 NW-----TPAAEFNIFVDPEAAEIVFQSGLPIVMAGLDVT 192
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 105/264 (39%), Gaps = 67/264 (25%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M +P++ D D D +AL+ L P +++K + S+ T+ V +L ++ R
Sbjct: 1 MAQPIILDCDPGHDDAIALVLALASPE--LDVKAVTSSAGNQTPEKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV A G V P L R+L
Sbjct: 59 TDIPV------AGGAVKP-----------------------------LMREL------II 77
Query: 525 AENSVRFGASQDNDDPELRQPL-------AVDVWKSIV-ESIEPGSKITILTNGPLTNLA 576
A+N D P L +P+ AV++ ++ ES EP +T++ GP TN+A
Sbjct: 78 ADN---VHGESGLDGPTLPEPVFAPQNCTAVELMAKVLRESAEP---VTLVATGPQTNVA 131
Query: 577 QIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ I + ++GG N + AEFN+F+DP AA+ VF+S L
Sbjct: 132 LLLNSHPELHGKIARIVMMGGAMALGN---------WTPAAEFNIFVDPEAAEIVFQSGL 182
Query: 636 EIKLIPLHMQRRVASFFKILHKLR 659
I + L + R + + R
Sbjct: 183 PIVMAGLDVTHRAQIMADDIERFR 206
>gi|258424709|ref|ZP_05687586.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus A9635]
gi|417889687|ref|ZP_12533772.1| cytidine/uridine-specific hydrolase [Staphylococcus aureus subsp.
aureus 21200]
gi|418307944|ref|ZP_12919616.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus 21194]
gi|418888153|ref|ZP_13442292.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIG1524]
gi|257845304|gb|EEV69341.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus A9635]
gi|341856846|gb|EGS97674.1| cytidine/uridine-specific hydrolase [Staphylococcus aureus subsp.
aureus 21200]
gi|365242879|gb|EHM83575.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus 21194]
gi|377756766|gb|EHT80663.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIG1524]
Length = 311
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 73/173 (42%), Gaps = 34/173 (19%)
Query: 78 PLRQPTA---QQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAI 132
P RQ A V+IN + S P+T+ G TN A L+ P + ++IE I +MGG
Sbjct: 97 PSRQAVAMPASDVIINKVMTSDTPVTIVATGPLTNVATALIREPRIAEHIESITLMGGG- 155
Query: 133 RSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
+ GN P AEFNI+ D AA V SGI + + LD T
Sbjct: 156 -----------------TFGNW-----TPTAEFNIWVDAEAAKRVFESGITINVFGLDVT 193
Query: 193 KTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWS-----GSPPFHEAYCM 240
+ ++ FE N AQ+ + L+ + T+ P H+A +
Sbjct: 194 HQVLADDHVIERFESINNPV-AQFVVELLQFFKKTYKTHFNMDGGPIHDACTI 245
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 114/283 (40%), Gaps = 55/283 (19%)
Query: 405 MGKPVVFDIDMSAGDFLALIYL--LKLPVELINLKGILVSSTGWATSATVDVVYDLLHMM 462
M + ++ D D D +ALI + P+E++ + + + + ++L +M
Sbjct: 1 MKRKIIMDCDPGHDDAIALILAGAIDSPLEILAVTTV---AGNQSVDKNTTNALNVLDIM 57
Query: 463 GRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRR 522
GR DI V G P I +A I SG LD LP +P R
Sbjct: 58 GRQDIAVAKG---------ADRPLIKPAAFASEIHGESG--LD-------GPKLPATPSR 99
Query: 523 YTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQ-IIGL 581
+ P + + ++ S P +TI+ GPLTN+A +I
Sbjct: 100 QA-----------------VAMPASDVIINKVMTSDTP---VTIVATGPLTNVATALIRE 139
Query: 582 QNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
+ I+ + ++GG GN + AEFN+++D AAK VFES + I +
Sbjct: 140 PRIAEHIESITLMGGGTF-----GN-----WTPTAEFNIWVDAEAAKRVFESGITINVFG 189
Query: 642 LHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSH 684
L + +V + ++ + + P + F LLQ ++H
Sbjct: 190 LDVTHQVLADDHVIERF-ESINNPVAQFVVELLQFFKKTYKTH 231
>gi|421843462|ref|ZP_16276622.1| ribonucleoside hydrolase 1 [Citrobacter freundii ATCC 8090 = MTCC
1658]
gi|411775183|gb|EKS58629.1| ribonucleoside hydrolase 1 [Citrobacter freundii ATCC 8090 = MTCC
1658]
Length = 311
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 64/137 (46%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + P +T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPE--PTFAP-QDCTAVELMAKTLRESPEQMTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I+ I +MGGA+ +GN P AEFNIF DP AA
Sbjct: 138 PELHAKIDRIVIMGGAM-----------------GLGNW-----TPAAEFNIFVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 104/245 (42%), Gaps = 53/245 (21%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++FD D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILFDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPDKTLCNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAVKPLM----------------RDLIIADNVHGESGLDGPALPEPT 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A QD EL K++ ES E ++TI++ GP TN+A ++
Sbjct: 97 FA--------PQDCTAVELMA-------KTLRESPE---QMTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+ I + I+GG G N + AEFN+F+DP AA+ VF+S + + + L
Sbjct: 139 ELHAKIDRIVIMGGAMGLGN---------WTPAAEFNIFVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRR 647
+ +
Sbjct: 190 DVTHK 194
>gi|417365927|ref|ZP_12138389.1| Inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Hvittingfoss str.
A4-620]
gi|353593206|gb|EHC51021.1| Inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Hvittingfoss str.
A4-620]
Length = 311
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 59/128 (46%), Gaps = 33/128 (25%)
Query: 67 AFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEH 124
+F PQ G TA +++ + S+ P+T+ G TN A+ L ++P L I
Sbjct: 96 SFAPQSG---------TAVELMAKTLRESSQPVTIVSTGPQTNVALLLNSHPELHTKIAR 146
Query: 125 IYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPV 184
I +MGGA+ +GN P AEFNI+ DP AA V SGIPV
Sbjct: 147 IVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAEIVFQSGIPV 184
Query: 185 TIIPLDAT 192
+ LD T
Sbjct: 185 VMAGLDVT 192
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 112/271 (41%), Gaps = 53/271 (19%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + +K I S+ T+ V +L ++ R
Sbjct: 1 MALPIIIDCDPGHDDAIALVLALASPE--LEVKAITSSAGNQTPEKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 PDIPV------AGGAVKPLM----------------RELIIADNVHGESGLDGPALP--- 93
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
E S A Q EL K++ ES +P +TI++ GP TN+A ++
Sbjct: 94 --EPSF---APQSGTAVELMA-------KTLRESSQP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+ I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHTKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLRDRKKTPESVFSQRL 673
+ + + + RD ++ ++ L
Sbjct: 190 DVTHKAQIHAADIERFRDIGNPISTIVAELL 220
>gi|365138094|ref|ZP_09344791.1| pyrimidine-specific ribonucleoside hydrolase rihA [Klebsiella sp.
4_1_44FAA]
gi|363655421|gb|EHL94263.1| pyrimidine-specific ribonucleoside hydrolase rihA [Klebsiella sp.
4_1_44FAA]
Length = 311
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + + S P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPSLPEPA--FAP-QNCTAVELMASVLRESQEPVTLVATGPQTNVALLLASH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHAKIARIVIMGGAM-----------------GLGNW-----QPAAEFNIYVDPQAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 MVFQSGIPVVMAGLDVT 192
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 111/287 (38%), Gaps = 68/287 (23%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + +K + S+ T+ V +L ++ R
Sbjct: 1 MALPIMIDCDPGHDDAIALVLALASPE--LEVKAVTASAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV A G P L RDL
Sbjct: 59 QDIPV------AGGAWKP-----------------------------LMRDL------II 77
Query: 525 AENSVRFGASQDNDDPELRQP-------LAVDVWKSIV-ESIEPGSKITILTNGPLTNLA 576
A+N D P L +P AV++ S++ ES EP +T++ GP TN+A
Sbjct: 78 ADN---VHGESGLDGPSLPEPAFAPQNCTAVELMASVLRESQEP---VTLVATGPQTNVA 131
Query: 577 QIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ + I + I+GG G N + AEFN+++DP AA+ VF+S +
Sbjct: 132 LLLASHPELHAKIARIVIMGGAMGLGNWQ---------PAAEFNIYVDPQAAEMVFQSGI 182
Query: 636 EIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQ 682
+ + L + + + + R + P S LL M +
Sbjct: 183 PVVMAGLDVTHKAQILPADIERFR-QIGNPVSTIVAELLDFFMAYHK 228
>gi|297205372|ref|ZP_06922768.1| possible ribosylpyrimidine nucleosidase [Lactobacillus jensenii
JV-V16]
gi|297149950|gb|EFH30247.1| possible ribosylpyrimidine nucleosidase [Lactobacillus jensenii
JV-V16]
Length = 316
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 111/258 (43%), Gaps = 48/258 (18%)
Query: 407 KPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDD 466
K V+ ID D +AL Y+L + ++L GI+ + T V LL M+GR D
Sbjct: 2 KKVILSIDTGIDDAMALAYVLG--SKELDLIGIVGTYGNVYTKQGVKNDLALLEMLGRKD 59
Query: 467 IPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAE 526
IPV LG+ A+ + + + + + G G + + +P + R+
Sbjct: 60 IPVYLGNEHAIDKDDFEVSEVSADIH------GQNGIGEVE--------VPAATRQVETG 105
Query: 527 NSVRFGASQDNDDPELRQPLAVDVWKSIVESIEP-GSKITILTNGPLTNLAQIIGLQNS- 584
+ V F I++S++ G +T++ GP+T+LA+ + +
Sbjct: 106 DGVDF----------------------IIDSVKKYGKDLTVIATGPMTDLARTLKKYPAF 143
Query: 585 SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHM 644
+ V I+GG GNV + YAE N+ DPLAAK +FES + ++ L +
Sbjct: 144 KDEVGQVVIMGGALAC---TGNV-----TPYAEANIHQDPLAAKILFESGTPVIMVGLDV 195
Query: 645 QRRVASFFKILHKLRDRK 662
R + K RD K
Sbjct: 196 TMRTPISLEDTQKWRDTK 213
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 75/198 (37%), Gaps = 49/198 (24%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQRLYVNT 60
M+ R DIPV +G E I + + +V G + GE +P R V T
Sbjct: 54 MLGRKDIPVYLGNEHAIDKDDFEVSEVSADI----HGQNGIGEVE----VPAATR-QVET 104
Query: 61 NYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKK 120
G+ F+ +KY +TV G T+ A L P K
Sbjct: 105 GDGVD--FIIDSVKKYGK-----------------DLTVIATGPMTDLARTLKKYPAFKD 145
Query: 121 NIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHS 180
+ + +MGGA+ GN+ PYAE NI DP AA + S
Sbjct: 146 EVGQVVIMGGALAC----------------TGNV-----TPYAEANIHQDPLAAKILFES 184
Query: 181 GIPVTIIPLDATKTIPVS 198
G PV ++ LD T P+S
Sbjct: 185 GTPVIMVGLDVTMRTPIS 202
>gi|418645572|ref|ZP_13207693.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus IS-55]
gi|443638983|ref|ZP_21123007.1| putative cytidine/uridine-specific hydrolase [Staphylococcus aureus
subsp. aureus 21196]
gi|375022676|gb|EHS16147.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus IS-55]
gi|443407938|gb|ELS66469.1| putative cytidine/uridine-specific hydrolase [Staphylococcus aureus
subsp. aureus 21196]
Length = 311
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 75/173 (43%), Gaps = 34/173 (19%)
Query: 78 PLRQPTA---QQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAI 132
P RQ A V+IN + S P+T+ G TN A L+ P + ++IE I +MGG
Sbjct: 97 PSRQAVAMPASDVIINKVMTSDTPVTIVATGPLTNVATALIREPRIAEHIESITLMGGG- 155
Query: 133 RSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
+ GN P AEFNI+ D AA V SGI + + LD T
Sbjct: 156 -----------------TFGNW-----TPTAEFNIWVDAEAAKRVFESGITINVFGLDVT 193
Query: 193 KTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWS-----GSPPFHEAYCM 240
+ +++N +E N AQ+ + L+ + T+ P H+A +
Sbjct: 194 HQV-LADNHVIERFESINNPVAQFVVELLQFFKKTYKTHFNMDGGPIHDACTI 245
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 117/287 (40%), Gaps = 63/287 (21%)
Query: 405 MGKPVVFDIDMSAGDFLALIYL--LKLPVELINLKGILVSSTGWATSATVDV----VYDL 458
M + ++ D D D +ALI + P+E++ + + A + +VD ++
Sbjct: 1 MKRKIIMDCDPGHDDAIALILAGAIDSPLEILAVTTV-------AGNQSVDKNTTNALNV 53
Query: 459 LHMMGRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPR 518
L +MGR DI V G P I +A I SG LD LP
Sbjct: 54 LDIMGRQDIAVAKG---------ADRPLIKSAAFASEIHGESG--LD-------GPKLPS 95
Query: 519 SPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQ- 577
+P R + P + + ++ S P +TI+ GPLTN+A
Sbjct: 96 TPSRQA-----------------VAMPASDVIINKVMTSDTP---VTIVATGPLTNVATA 135
Query: 578 IIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEI 637
+I + I+ + ++GG GN + AEFN+++D AAK VFES + I
Sbjct: 136 LIREPRIAEHIESITLMGGGTF-----GN-----WTPTAEFNIWVDAEAAKRVFESGITI 185
Query: 638 KLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSH 684
+ L + +V + ++ + + P + F LLQ ++H
Sbjct: 186 NVFGLDVTHQVLADNHVIERF-ESINNPVAQFVVELLQFFKKTYKTH 231
>gi|418558631|ref|ZP_13123183.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus 21252]
gi|371977367|gb|EHO94640.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus 21252]
Length = 311
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 73/173 (42%), Gaps = 34/173 (19%)
Query: 78 PLRQPTA---QQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAI 132
P RQ A V+IN + S P+T+ G TN A L+ P + ++IE I +MGG
Sbjct: 97 PSRQAVAMPASDVIINKVMTSDTPVTIVATGPLTNVATALIREPRIAEHIESITLMGGG- 155
Query: 133 RSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
+ GN P AEFNI+ D AA V SGI + + LD T
Sbjct: 156 -----------------TFGNW-----TPTAEFNIWVDAEAAKRVFESGITINVFGLDVT 193
Query: 193 KTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWS-----GSPPFHEAYCM 240
+ ++ FE N AQ+ + L+ + T+ P H+A +
Sbjct: 194 HQVLADDHVIERFESINNPV-AQFVVELLQFFKKTYKTHFNMDGGPIHDACTI 245
Score = 46.2 bits (108), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 114/283 (40%), Gaps = 55/283 (19%)
Query: 405 MGKPVVFDIDMSAGDFLALIYL--LKLPVELINLKGILVSSTGWATSATVDVVYDLLHMM 462
M + ++ D D D +ALI + P+E++ + + + + ++L +M
Sbjct: 1 MKRKIIMDCDPGHDDAIALILAGAIDSPLEILAVTTV---AGNQSVDKNTTNALNVLDIM 57
Query: 463 GRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRR 522
GR DI V G P I +A I SG LD LP +P R
Sbjct: 58 GRQDIAVAKG---------ADRPLIKPAAFASEIHGESG--LD-------GPKLPATPSR 99
Query: 523 YTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQ-IIGL 581
+ P + + ++ S P +TI+ GPLTN+A +I
Sbjct: 100 QA-----------------VAMPASDVIINKVMTSDTP---VTIVATGPLTNVATALIRE 139
Query: 582 QNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
+ I+ + ++GG GN + AEFN+++D AAK VFES + I +
Sbjct: 140 PRIAEHIESITLMGGGTF-----GN-----WTPTAEFNIWVDAEAAKRVFESGITINVFG 189
Query: 642 LHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSH 684
L + +V + ++ + + P + F LLQ ++H
Sbjct: 190 LDVTHQVLADDHVIERF-ESINNPVAQFVVELLQFFKKTYKTH 231
>gi|375260756|ref|YP_005019926.1| ribonucleoside hydrolase 1 [Klebsiella oxytoca KCTC 1686]
gi|365910234|gb|AEX05687.1| ribonucleoside hydrolase 1 [Klebsiella oxytoca KCTC 1686]
Length = 311
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 51/118 (43%), Gaps = 22/118 (18%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
SA P+T+ G TN A+ L ++P L I I +MGGA+ +G
Sbjct: 115 SAEPVTIVATGPQTNVALLLNSHPELHAKIARIVIMGGAM-----------------VLG 157
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQN 210
N P EFNI+ DP AA V SGIPV + LD T + F R N
Sbjct: 158 NW-----QPAVEFNIYVDPEAAEIVFQSGIPVVMAGLDVTHKAQIHVEDIERFRRIGN 210
Score = 46.6 bits (109), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 111/279 (39%), Gaps = 68/279 (24%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M PV+ D D D +AL+ L P +N+K + S+ T+ V +L ++ R
Sbjct: 1 MALPVIIDCDPGHDDAIALVLALASPE--LNVKAVTSSAGNQTPDKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV +GG L L R+L
Sbjct: 59 PDIPV------------------------------AGGALKP-----LMREL------II 77
Query: 525 AENSVRFGASQDNDDPELRQP-------LAVDVW-KSIVESIEPGSKITILTNGPLTNLA 576
A+N D P L +P AV++ K++ +S EP +TI+ GP TN+A
Sbjct: 78 ADN---VHGESGLDGPALPEPGFAAQTCTAVELMAKTLRDSAEP---VTIVATGPQTNVA 131
Query: 577 QIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ + I + I+GG N + V EFN+++DP AA+ VF+S +
Sbjct: 132 LLLNSHPELHAKIARIVIMGGAMVLGNWQPAV---------EFNIYVDPEAAEIVFQSGI 182
Query: 636 EIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLL 674
+ + L + + + + + R R P S LL
Sbjct: 183 PVVMAGLDVTHKAQIHVEDIERFR-RIGNPISTIVAELL 220
>gi|238894950|ref|YP_002919684.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|238547266|dbj|BAH63617.1| pyrimidine specific nucleoside hydrolase [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
Length = 366
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + + S P+T+ G TN A+ L ++
Sbjct: 136 VHGESGLDGPSLPEPA--FAP-QNCTAVELMASVLRESQEPVTLVATGPQTNVALLLASH 192
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 193 PELHAKIARIVIMGGAM-----------------GLGNW-----QPAAEFNIYVDPQAAE 230
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 231 MVFQSGIPVVMAGLDVT 247
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 119/309 (38%), Gaps = 68/309 (22%)
Query: 383 NISTQFPYYEEILRKPDFGKKLMGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVS 442
IS+ P+ ++ + M P++ D D D +AL+ L P + +K + S
Sbjct: 34 TISSASPHSVNLVTEQRQQGAAMALPIMIDCDPGHDDAIALVLALASPE--LEVKAVTAS 91
Query: 443 STGWATSATVDVVYDLLHMMGRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGG 502
+ T+ V +L ++ R DIPV A G P
Sbjct: 92 AGNQTPEKTLRNVLRMLTLLNRPDIPV------AGGAWKP-------------------- 125
Query: 503 FLDSDTLYGLARDLPRSPRRYTAENSVRFGASQDNDDPELRQP-------LAVDVWKSIV 555
L RDL A+N D P L +P AV++ S++
Sbjct: 126 ---------LMRDL------IIADN---VHGESGLDGPSLPEPAFAPQNCTAVELMASVL 167
Query: 556 -ESIEPGSKITILTNGPLTNLAQIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSS 613
ES EP +T++ GP TN+A ++ + I + I+GG G N +
Sbjct: 168 RESQEP---VTLVATGPQTNVALLLASHPELHAKIARIVIMGGAMGLGNWQ--------- 215
Query: 614 KYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRL 673
AEFN+++DP AA+ VF+S + + + L + + + + R + P S L
Sbjct: 216 PAAEFNIYVDPQAAEMVFQSGIPVVMAGLDVTHKAQILPADIERFR-QIGNPVSTIVAEL 274
Query: 674 LQGLMTLQQ 682
L M +
Sbjct: 275 LDFFMAYHK 283
>gi|27467673|ref|NP_764310.1| ribonucleoside hydrolase RihC [Staphylococcus epidermidis ATCC
12228]
gi|57866528|ref|YP_188227.1| ribonucleoside hydrolase RihC [Staphylococcus epidermidis RP62A]
gi|282876585|ref|ZP_06285450.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis SK135]
gi|417645406|ref|ZP_12295309.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus
epidermidis VCU144]
gi|417657606|ref|ZP_12307266.1| cytidine/uridine-specific hydrolase [Staphylococcus epidermidis
VCU028]
gi|417659485|ref|ZP_12309087.1| cytidine/uridine-specific hydrolase [Staphylococcus epidermidis
VCU045]
gi|417909046|ref|ZP_12552792.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus
epidermidis VCU037]
gi|417911511|ref|ZP_12555215.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus
epidermidis VCU105]
gi|417913989|ref|ZP_12557646.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus
epidermidis VCU109]
gi|418603994|ref|ZP_13167363.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus
epidermidis VCU041]
gi|418608569|ref|ZP_13171761.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus
epidermidis VCU057]
gi|418610401|ref|ZP_13173515.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus
epidermidis VCU065]
gi|418611569|ref|ZP_13174647.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus
epidermidis VCU117]
gi|418616613|ref|ZP_13179537.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus
epidermidis VCU120]
gi|418620846|ref|ZP_13183640.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus
epidermidis VCU123]
gi|418624964|ref|ZP_13187623.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus
epidermidis VCU125]
gi|418627422|ref|ZP_13189999.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus
epidermidis VCU126]
gi|418629879|ref|ZP_13192374.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus
epidermidis VCU127]
gi|418664387|ref|ZP_13225869.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus
epidermidis VCU081]
gi|419769918|ref|ZP_14296008.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus aureus
subsp. aureus IS-250]
gi|419772700|ref|ZP_14298727.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus aureus
subsp. aureus IS-K]
gi|420164862|ref|ZP_14671576.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIHLM088]
gi|420170035|ref|ZP_14676608.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIHLM070]
gi|420173735|ref|ZP_14680225.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIHLM067]
gi|420182749|ref|ZP_14688883.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIHLM049]
gi|420187718|ref|ZP_14693737.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIHLM039]
gi|420196829|ref|ZP_14702566.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIHLM020]
gi|420201517|ref|ZP_14707131.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIHLM018]
gi|420210234|ref|ZP_14715664.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIHLM003]
gi|420211104|ref|ZP_14716480.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIHLM001]
gi|420213694|ref|ZP_14718996.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIH05005]
gi|420217739|ref|ZP_14722880.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIH05001]
gi|420220327|ref|ZP_14725308.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIH04008]
gi|420222132|ref|ZP_14727055.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIH08001]
gi|420224991|ref|ZP_14729828.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIH06004]
gi|420226869|ref|ZP_14731644.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIH05003]
gi|420229193|ref|ZP_14733900.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIH04003]
gi|420231554|ref|ZP_14736201.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIH051668]
gi|421607420|ref|ZP_16048665.1| ribonucleoside hydrolase RihC [Staphylococcus epidermidis AU12-03]
gi|27315217|gb|AAO04352.1|AE016746_142 inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis ATCC 12228]
gi|57637186|gb|AAW53974.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis RP62A]
gi|281294673|gb|EFA87202.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis SK135]
gi|329732838|gb|EGG69184.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus
epidermidis VCU144]
gi|329734261|gb|EGG70577.1| cytidine/uridine-specific hydrolase [Staphylococcus epidermidis
VCU028]
gi|329735510|gb|EGG71798.1| cytidine/uridine-specific hydrolase [Staphylococcus epidermidis
VCU045]
gi|341652791|gb|EGS76567.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus
epidermidis VCU105]
gi|341654027|gb|EGS77785.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus
epidermidis VCU109]
gi|341654240|gb|EGS77988.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus
epidermidis VCU037]
gi|374401181|gb|EHQ72263.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus
epidermidis VCU057]
gi|374404509|gb|EHQ75481.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus
epidermidis VCU065]
gi|374406011|gb|EHQ76917.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus
epidermidis VCU041]
gi|374410546|gb|EHQ81290.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus
epidermidis VCU081]
gi|374820691|gb|EHR84767.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus
epidermidis VCU120]
gi|374822329|gb|EHR86355.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus
epidermidis VCU117]
gi|374826055|gb|EHR89966.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus
epidermidis VCU125]
gi|374829622|gb|EHR93421.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus
epidermidis VCU126]
gi|374831053|gb|EHR94803.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus
epidermidis VCU123]
gi|374833109|gb|EHR96810.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus
epidermidis VCU127]
gi|383357731|gb|EID35196.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus aureus
subsp. aureus IS-250]
gi|383358955|gb|EID36394.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus aureus
subsp. aureus IS-K]
gi|394236775|gb|EJD82279.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIHLM088]
gi|394239545|gb|EJD84984.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIHLM067]
gi|394242630|gb|EJD88020.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIHLM070]
gi|394249785|gb|EJD94995.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIHLM049]
gi|394255877|gb|EJE00816.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIHLM039]
gi|394267033|gb|EJE11642.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIHLM020]
gi|394272291|gb|EJE16758.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIHLM018]
gi|394276791|gb|EJE21125.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIHLM003]
gi|394281783|gb|EJE26003.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIHLM001]
gi|394284881|gb|EJE28976.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIH05005]
gi|394286461|gb|EJE30462.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIH04008]
gi|394286869|gb|EJE30847.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIH05001]
gi|394289587|gb|EJE33465.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIH08001]
gi|394294131|gb|EJE37821.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIH06004]
gi|394297867|gb|EJE41457.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIH05003]
gi|394299461|gb|EJE43009.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIH04003]
gi|394302521|gb|EJE45965.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIH051668]
gi|406656954|gb|EKC83348.1| ribonucleoside hydrolase RihC [Staphylococcus epidermidis AU12-03]
Length = 302
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 37/186 (19%)
Query: 85 QQVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQ 144
+ +L+N + P+T+ +G TN AI L + P ++ I+ I +MGG+
Sbjct: 109 RNLLVN--TQEPLTLIAIGPLTNIAILLTSYPEVQPFIKEIVLMGGSTGR---------- 156
Query: 145 SEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVE 204
GN+ P AEFNI+ DP AA V +SG+P+T+I LD + + +F +
Sbjct: 157 -------GNV-----TPLAEFNIYCDPEAAQIVFNSGLPLTMIGLDLAREALFTHHFVKD 204
Query: 205 FERRQNTYEAQY-CFQSLKMIRDTWSGSPPFHEAYCMWDSFMAGVALSIMLNSSSHNGEN 263
F+ T Y FQ K S F + ++D F + +L+ + N +
Sbjct: 205 FKDTNATSNMLYNLFQHYK--------SEDFEIGFKLYDVF----TILYLLDPEAFNVKE 252
Query: 264 ACSEME 269
A +++E
Sbjct: 253 AYTQIE 258
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 15/138 (10%)
Query: 535 QDNDDPELRQPLAVDVWKSI-VESIEPGSKITILTNGPLTNLAQII-GLQNSSSVIQDVY 592
Q N D +L AV+ +++ V + EP +T++ GPLTN+A ++ I+++
Sbjct: 93 QINQD-DLTSIHAVEAMRNLLVNTQEP---LTLIAIGPLTNIAILLTSYPEVQPFIKEIV 148
Query: 593 IVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFF 652
++GG+ G +GNV + AEFN++ DP AA+ VF S L + +I L + R
Sbjct: 149 LMGGSTG----RGNV-----TPLAEFNIYCDPEAAQIVFNSGLPLTMIGLDLAREALFTH 199
Query: 653 KILHKLRDRKKTPESVFS 670
+ +D T +++
Sbjct: 200 HFVKDFKDTNATSNMLYN 217
>gi|237730629|ref|ZP_04561110.1| ribonucleoside hydrolase 1 [Citrobacter sp. 30_2]
gi|226906168|gb|EEH92086.1| ribonucleoside hydrolase 1 [Citrobacter sp. 30_2]
Length = 311
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 64/137 (46%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + S P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPEPA--FAP-QDCTAVELMAKTLRESPEPMTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNIF DP AA
Sbjct: 138 PELHAKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIFVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 104/245 (42%), Gaps = 53/245 (21%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++FD D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILFDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPDKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAVKPLM----------------RDLIIADNVHGESGLDGPALPEPA 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A QD EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FA--------PQDCTAVELMA-------KTLRESPEP---MTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+ I + I+GG G N + AEFN+F+DP AA+ VF+S + + + L
Sbjct: 139 ELHAKIARIVIMGGAMGLGN---------WTPAAEFNIFVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRR 647
+ +
Sbjct: 190 DVTHK 194
>gi|397657846|ref|YP_006498548.1| inosine-uridine preferring nucleoside hydrolase [Klebsiella oxytoca
E718]
gi|394346239|gb|AFN32360.1| Inosine-uridine preferring nucleoside hydrolase [Klebsiella oxytoca
E718]
Length = 311
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 51/118 (43%), Gaps = 22/118 (18%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
SA P+T+ G TN A+ L ++P L I I +MGGA+ +G
Sbjct: 115 SAEPVTIVATGPQTNVALLLNSHPELHAKIARIVIMGGAM-----------------VLG 157
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQN 210
N P EFNI+ DP AA V SGIPV + LD T + F R N
Sbjct: 158 NW-----QPAVEFNIYVDPEAAEIVFQSGIPVVMAGLDVTHKAQIHVEDIERFRRIGN 210
Score = 46.6 bits (109), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 111/279 (39%), Gaps = 68/279 (24%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M PV+ D D D +AL+ L P +N+K + S+ T+ V +L ++ R
Sbjct: 1 MALPVIIDCDPGHDDAIALVLALASPE--LNVKAVTSSAGNQTPDKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV +GG L L R+L
Sbjct: 59 PDIPV------------------------------AGGALKP-----LMREL------II 77
Query: 525 AENSVRFGASQDNDDPELRQP-------LAVDVW-KSIVESIEPGSKITILTNGPLTNLA 576
A+N D P L +P AV++ K++ +S EP +TI+ GP TN+A
Sbjct: 78 ADN---VHGESGLDGPALPEPGFAAQACTAVELMAKTLRDSAEP---VTIVATGPQTNVA 131
Query: 577 QIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ + I + I+GG N + V EFN+++DP AA+ VF+S +
Sbjct: 132 LLLNSHPELHAKIARIVIMGGAMVLGNWQPAV---------EFNIYVDPEAAEIVFQSGI 182
Query: 636 EIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLL 674
+ + L + + + + + R R P S LL
Sbjct: 183 PVVMAGLDVTHKAQIHVEDIERFR-RIGNPISTIVAELL 220
>gi|418630684|ref|ZP_13193161.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus
epidermidis VCU128]
gi|374836892|gb|EHS00466.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus
epidermidis VCU128]
Length = 302
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 37/186 (19%)
Query: 85 QQVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQ 144
+ +L+N + P+T+ +G TN AI L + P ++ I+ I +MGG+
Sbjct: 109 RNLLVN--TQEPLTLIAIGPLTNIAILLTSYPEVQPFIKEIVLMGGSTGR---------- 156
Query: 145 SEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVE 204
GN+ P AEFNI+ DP AA V +SG+P+T+I LD + + +F +
Sbjct: 157 -------GNV-----TPLAEFNIYCDPEAAQIVFNSGLPLTMIGLDLAREALFTHHFVKD 204
Query: 205 FERRQNTYEAQY-CFQSLKMIRDTWSGSPPFHEAYCMWDSFMAGVALSIMLNSSSHNGEN 263
F+ T Y FQ K S F + ++D F + +L+ + N +
Sbjct: 205 FKDTNATSSMLYNLFQHYK--------SEDFDIGFKLYDVF----TILYLLDPEAFNVKE 252
Query: 264 ACSEME 269
A +++E
Sbjct: 253 AYTQIE 258
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 15/138 (10%)
Query: 535 QDNDDPELRQPLAVDVWKSI-VESIEPGSKITILTNGPLTNLAQII-GLQNSSSVIQDVY 592
Q N D +L AV+ +++ V + EP +T++ GPLTN+A ++ I+++
Sbjct: 93 QINQD-DLTSIHAVEAMRNLLVNTQEP---LTLIAIGPLTNIAILLTSYPEVQPFIKEIV 148
Query: 593 IVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFF 652
++GG+ G +GNV + AEFN++ DP AA+ VF S L + +I L + R
Sbjct: 149 LMGGSTG----RGNV-----TPLAEFNIYCDPEAAQIVFNSGLPLTMIGLDLAREALFTH 199
Query: 653 KILHKLRDRKKTPESVFS 670
+ +D T +++
Sbjct: 200 HFVKDFKDTNATSSMLYN 217
>gi|417340076|ref|ZP_12121490.1| Inosine-uridine preferring nucleoside hydrolase, partial
[Salmonella enterica subsp. enterica serovar Baildon
str. R6-199]
gi|357959581|gb|EHJ83745.1| Inosine-uridine preferring nucleoside hydrolase, partial
[Salmonella enterica subsp. enterica serovar Baildon
str. R6-199]
Length = 241
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 59/128 (46%), Gaps = 33/128 (25%)
Query: 67 AFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEH 124
+F PQ G TA +++ + S+ P+T+ G TN A+ L ++P L I
Sbjct: 96 SFAPQSG---------TAVELMAKTLRESSQPVTIVSTGPQTNVALLLNSHPELHTKIAR 146
Query: 125 IYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPV 184
I +MGGA+ +GN P AEFNI+ DP AA V SGIPV
Sbjct: 147 IVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAEIVFQSGIPV 184
Query: 185 TIIPLDAT 192
+ LD T
Sbjct: 185 VMAGLDVT 192
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 104/245 (42%), Gaps = 53/245 (21%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + +K I S+ T+ V +L ++ R
Sbjct: 1 MALPIIIDCDPGHDDAIALVLALASPE--LEVKAITSSAGNQTPEKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 PDIPV------AGGAVKPLM----------------RELIIADNVHGESGLDGPALP--- 93
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
E S A Q EL + K++ ES +P +TI++ GP TN+A ++
Sbjct: 94 --EPSF---APQSGTAVEL-------MAKTLRESSQP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+ I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHTKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRR 647
+ +
Sbjct: 190 DVTHK 194
>gi|378979043|ref|YP_005227184.1| pyrimidine specific nucleoside hydrolase [Klebsiella pneumoniae
subsp. pneumoniae HS11286]
gi|386035040|ref|YP_005954953.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae KCTC 2242]
gi|402780586|ref|YP_006636132.1| inosine-uridine preferring nucleoside hydrolase [Klebsiella
pneumoniae subsp. pneumoniae 1084]
gi|419973079|ref|ZP_14488505.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|419980384|ref|ZP_14495669.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|419985659|ref|ZP_14500798.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|419991343|ref|ZP_14506309.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|419997453|ref|ZP_14512249.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|420001828|ref|ZP_14516482.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|420007329|ref|ZP_14521823.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|420015499|ref|ZP_14529799.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|420020933|ref|ZP_14535117.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|420026481|ref|ZP_14540483.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|420030715|ref|ZP_14544540.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|420043811|ref|ZP_14557296.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|420049529|ref|ZP_14562836.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|420055143|ref|ZP_14568312.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|420058443|ref|ZP_14571455.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|420066935|ref|ZP_14579732.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|420070084|ref|ZP_14582737.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|420077753|ref|ZP_14590216.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|420083224|ref|ZP_14595509.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|421911030|ref|ZP_16340795.1| Inosine-uridine preferring nucleoside hydrolase [Klebsiella
pneumoniae subsp. pneumoniae ST258-K26BO]
gi|421919172|ref|ZP_16348679.1| Inosine-uridine preferring nucleoside hydrolase [Klebsiella
pneumoniae subsp. pneumoniae ST258-K28BO]
gi|424830836|ref|ZP_18255564.1| pyrimidine-specific ribonucleoside hydrolase RihA [Klebsiella
pneumoniae subsp. pneumoniae Ecl8]
gi|424933220|ref|ZP_18351592.1| Pyrimidine-specific ribonucleoside hydrolase rihA
(Cytidine/uridine-specific hydrolase) [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
gi|425076519|ref|ZP_18479622.1| pyrimidine-specific ribonucleoside hydrolase rihA [Klebsiella
pneumoniae subsp. pneumoniae WGLW1]
gi|425081729|ref|ZP_18484826.1| pyrimidine-specific ribonucleoside hydrolase rihA [Klebsiella
pneumoniae subsp. pneumoniae WGLW2]
gi|425087152|ref|ZP_18490245.1| pyrimidine-specific ribonucleoside hydrolase rihA [Klebsiella
pneumoniae subsp. pneumoniae WGLW3]
gi|425091719|ref|ZP_18494804.1| pyrimidine-specific ribonucleoside hydrolase rihA [Klebsiella
pneumoniae subsp. pneumoniae WGLW5]
gi|428151827|ref|ZP_18999532.1| Inosine-uridine preferring nucleoside hydrolase [Klebsiella
pneumoniae subsp. pneumoniae ST512-K30BO]
gi|428934775|ref|ZP_19008281.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae JHCK1]
gi|428940058|ref|ZP_19013153.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae VA360]
gi|449053349|ref|ZP_21732506.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae hvKP1]
gi|339762168|gb|AEJ98388.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae KCTC 2242]
gi|364518454|gb|AEW61582.1| pyrimidine specific nucleoside hydrolase [Klebsiella pneumoniae
subsp. pneumoniae HS11286]
gi|397346181|gb|EJJ39298.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|397349658|gb|EJJ42751.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|397350678|gb|EJJ43765.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|397362721|gb|EJJ55368.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|397364099|gb|EJJ56733.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|397371611|gb|EJJ64129.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|397376368|gb|EJJ68628.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|397384720|gb|EJJ76832.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|397387310|gb|EJJ79344.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|397395208|gb|EJJ86919.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|397401464|gb|EJJ93088.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|397413030|gb|EJK04252.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|397413184|gb|EJK04402.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|397422106|gb|EJK13090.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|397428983|gb|EJK19708.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|397436855|gb|EJK27433.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|397442099|gb|EJK32457.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|397445640|gb|EJK35877.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|397451425|gb|EJK41510.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|402541489|gb|AFQ65638.1| Inosine-uridine preferring nucleoside hydrolase [Klebsiella
pneumoniae subsp. pneumoniae 1084]
gi|405592228|gb|EKB65680.1| pyrimidine-specific ribonucleoside hydrolase rihA [Klebsiella
pneumoniae subsp. pneumoniae WGLW1]
gi|405603159|gb|EKB76282.1| pyrimidine-specific ribonucleoside hydrolase rihA [Klebsiella
pneumoniae subsp. pneumoniae WGLW2]
gi|405603876|gb|EKB76997.1| pyrimidine-specific ribonucleoside hydrolase rihA [Klebsiella
pneumoniae subsp. pneumoniae WGLW3]
gi|405612778|gb|EKB85529.1| pyrimidine-specific ribonucleoside hydrolase rihA [Klebsiella
pneumoniae subsp. pneumoniae WGLW5]
gi|407807407|gb|EKF78658.1| Pyrimidine-specific ribonucleoside hydrolase rihA
(Cytidine/uridine-specific hydrolase) [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
gi|410114970|emb|CCM83420.1| Inosine-uridine preferring nucleoside hydrolase [Klebsiella
pneumoniae subsp. pneumoniae ST258-K26BO]
gi|410118530|emb|CCM91304.1| Inosine-uridine preferring nucleoside hydrolase [Klebsiella
pneumoniae subsp. pneumoniae ST258-K28BO]
gi|414708268|emb|CCN29972.1| pyrimidine-specific ribonucleoside hydrolase RihA [Klebsiella
pneumoniae subsp. pneumoniae Ecl8]
gi|426302070|gb|EKV64286.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae JHCK1]
gi|426302983|gb|EKV65168.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae VA360]
gi|427538171|emb|CCM95670.1| Inosine-uridine preferring nucleoside hydrolase [Klebsiella
pneumoniae subsp. pneumoniae ST512-K30BO]
gi|448875684|gb|EMB10694.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae hvKP1]
Length = 311
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + + S P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPSLPEPA--FAP-QNCTAVELMASVLRESQEPVTLVATGPQTNVALLLASH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHAKIARIVIMGGAM-----------------GLGNW-----QPAAEFNIYVDPQAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 MVFQSGIPVVMAGLDVT 192
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 111/287 (38%), Gaps = 68/287 (23%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + +K + S+ T+ V +L ++ R
Sbjct: 1 MALPIMIDCDPGHDDAIALVLALASPE--LEVKAVTASAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV A G P L RDL
Sbjct: 59 PDIPV------AGGAWKP-----------------------------LMRDL------II 77
Query: 525 AENSVRFGASQDNDDPELRQP-------LAVDVWKSIV-ESIEPGSKITILTNGPLTNLA 576
A+N D P L +P AV++ S++ ES EP +T++ GP TN+A
Sbjct: 78 ADN---VHGESGLDGPSLPEPAFAPQNCTAVELMASVLRESQEP---VTLVATGPQTNVA 131
Query: 577 QIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ + I + I+GG G N + AEFN+++DP AA+ VF+S +
Sbjct: 132 LLLASHPELHAKIARIVIMGGAMGLGNWQ---------PAAEFNIYVDPQAAEMVFQSGI 182
Query: 636 EIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQ 682
+ + L + + + + R + P S LL M +
Sbjct: 183 PVVMAGLDVTHKAQILPADIERFR-QIGNPVSTIVAELLDFFMAYHK 228
>gi|416426801|ref|ZP_11693203.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|416428736|ref|ZP_11694025.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|416439757|ref|ZP_11700397.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|416444353|ref|ZP_11703586.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|416453560|ref|ZP_11709634.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|416458775|ref|ZP_11713294.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|416466893|ref|ZP_11717170.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|416475995|ref|ZP_11720907.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|416486542|ref|ZP_11725139.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|416501750|ref|ZP_11732320.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|416529463|ref|ZP_11744356.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. LQC 10]
gi|416538551|ref|ZP_11749455.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB30]
gi|416544912|ref|ZP_11753073.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|416571856|ref|ZP_11767017.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 4441 H]
gi|416576875|ref|ZP_11769457.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|416584267|ref|ZP_11773988.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|416594881|ref|ZP_11780695.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|416601541|ref|ZP_11785086.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|416605941|ref|ZP_11787373.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|416614534|ref|ZP_11792786.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|416621712|ref|ZP_11796533.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|416631981|ref|ZP_11801311.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|416643741|ref|ZP_11806227.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|416648689|ref|ZP_11809334.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|416660227|ref|ZP_11815055.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|416670735|ref|ZP_11820224.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|416684153|ref|ZP_11824697.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|416695248|ref|ZP_11827592.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|416705588|ref|ZP_11830997.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|416713421|ref|ZP_11837063.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|416719247|ref|ZP_11841103.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|416725641|ref|ZP_11845922.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|416730750|ref|ZP_11848763.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|416740999|ref|ZP_11854830.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|416743097|ref|ZP_11856022.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|416756235|ref|ZP_11862515.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|416764743|ref|ZP_11868274.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|416766607|ref|ZP_11869223.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|418484774|ref|ZP_13053765.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 80959-06]
gi|418486446|ref|ZP_13055409.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035278]
gi|418493406|ref|ZP_13059873.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|418498288|ref|ZP_13064703.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|418504581|ref|ZP_13070939.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|418508199|ref|ZP_13074504.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|418525801|ref|ZP_13091781.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
gi|322613213|gb|EFY10156.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322621281|gb|EFY18138.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322623701|gb|EFY20539.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322628973|gb|EFY25752.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322631695|gb|EFY28449.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322637569|gb|EFY34271.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322641909|gb|EFY38539.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322646753|gb|EFY43259.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322651454|gb|EFY47834.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322653095|gb|EFY49429.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322658815|gb|EFY55070.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322664915|gb|EFY61108.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322668917|gb|EFY65069.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322670577|gb|EFY66710.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322675318|gb|EFY71394.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322682211|gb|EFY78236.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322684960|gb|EFY80957.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323193982|gb|EFZ79184.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323197926|gb|EFZ83048.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323202027|gb|EFZ87087.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323210933|gb|EFZ95796.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323214313|gb|EFZ99064.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323219282|gb|EGA03773.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323225507|gb|EGA09737.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323231066|gb|EGA15182.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323234102|gb|EGA18191.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323238203|gb|EGA22261.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323242563|gb|EGA26587.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323248460|gb|EGA32394.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323251325|gb|EGA35197.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323259253|gb|EGA42896.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323261660|gb|EGA45235.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323264842|gb|EGA48343.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323272321|gb|EGA55728.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|363552338|gb|EHL36629.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. LQC 10]
gi|363561456|gb|EHL45573.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB30]
gi|363573790|gb|EHL57666.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 4441 H]
gi|366057802|gb|EHN22102.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 80959-06]
gi|366065012|gb|EHN29208.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|366071423|gb|EHN35523.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|366074065|gb|EHN38129.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|366075820|gb|EHN39871.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035278]
gi|366080136|gb|EHN44114.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|366829683|gb|EHN56559.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|372206570|gb|EHP20074.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
Length = 311
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 59/128 (46%), Gaps = 33/128 (25%)
Query: 67 AFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEH 124
+F PQ G TA +++ + S+ P+T+ G TN A+ L ++P L I
Sbjct: 96 SFAPQSG---------TAVELMAKTLRESSQPVTIVSTGPQTNVALLLNSHPELHTKIAR 146
Query: 125 IYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPV 184
I +MGGA+ +GN P AEFNI+ DP AA V SGIPV
Sbjct: 147 IVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAEIVFQSGIPV 184
Query: 185 TIIPLDAT 192
+ LD T
Sbjct: 185 VMAGLDVT 192
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 103/245 (42%), Gaps = 53/245 (21%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + +K I S+ T+ V +L ++ R
Sbjct: 1 MALPIIIDCDPGHDDAIALVLALASPE--LEVKAITSSAGNQTPEKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 PDIPV------AGGAVKPLM----------------RELIIADNVHGESGLDGPALP--- 93
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
E S A Q EL K++ ES +P +TI++ GP TN+A ++
Sbjct: 94 --EPSF---APQSGTAVELMA-------KTLRESSQP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+ I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHTKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRR 647
+ +
Sbjct: 190 DVTHK 194
>gi|418613938|ref|ZP_13176929.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus
epidermidis VCU118]
gi|418634748|ref|ZP_13197140.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus
epidermidis VCU129]
gi|420189742|ref|ZP_14695710.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIHLM037]
gi|374821940|gb|EHR85978.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus
epidermidis VCU118]
gi|374836675|gb|EHS00257.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus
epidermidis VCU129]
gi|394261077|gb|EJE05879.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIHLM037]
Length = 302
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 37/186 (19%)
Query: 85 QQVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQ 144
+ +L+N + P+T+ +G TN AI L + P ++ I+ I +MGG+
Sbjct: 109 KNLLVN--TQEPLTLIAIGPLTNIAILLTSYPEVQPFIKEIVLMGGSTGR---------- 156
Query: 145 SEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVE 204
GN+ P AEFNI+ DP AA V +SG+P+T+I LD + + +F +
Sbjct: 157 -------GNV-----TPLAEFNIYCDPEAAQIVFNSGLPLTMIGLDLAREALFTHHFVKD 204
Query: 205 FERRQNTYEAQY-CFQSLKMIRDTWSGSPPFHEAYCMWDSFMAGVALSIMLNSSSHNGEN 263
F+ T Y FQ K S F + ++D F + +L+ + N +
Sbjct: 205 FKDTNATSSMLYNLFQHYK--------SEDFDIGFKLYDVF----TILYLLDPEAFNVKE 252
Query: 264 ACSEME 269
A +++E
Sbjct: 253 AYTQIE 258
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 15/138 (10%)
Query: 535 QDNDDPELRQPLAVDVWKSI-VESIEPGSKITILTNGPLTNLAQII-GLQNSSSVIQDVY 592
Q N D +L AV+ K++ V + EP +T++ GPLTN+A ++ I+++
Sbjct: 93 QINQD-DLTSIHAVEAMKNLLVNTQEP---LTLIAIGPLTNIAILLTSYPEVQPFIKEIV 148
Query: 593 IVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFF 652
++GG+ G +GNV + AEFN++ DP AA+ VF S L + +I L + R
Sbjct: 149 LMGGSTG----RGNV-----TPLAEFNIYCDPEAAQIVFNSGLPLTMIGLDLAREALFTH 199
Query: 653 KILHKLRDRKKTPESVFS 670
+ +D T +++
Sbjct: 200 HFVKDFKDTNATSSMLYN 217
>gi|308188550|ref|YP_003932681.1| inosine-uridine preferring nucleoside hydrolase [Pantoea vagans
C9-1]
gi|308059060|gb|ADO11232.1| inosine-uridine preferring nucleoside hydrolase [Pantoea vagans
C9-1]
Length = 306
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 23/138 (16%)
Query: 82 PTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNS 139
P A Q +I+++ A P IT+ +G TN A + P + ++ + +MGGA +D +
Sbjct: 96 PGAVQFIIDSVRAQPHQITLMAIGPLTNIATAINQAPDIIPLVKELVIMGGAFGTDGHS- 154
Query: 140 TNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSE 199
GN+ P++EFNI+ DP AA VL S + V +IPLD T + +S
Sbjct: 155 ------------GNV-----TPFSEFNIWKDPHAADQVLASALNVVVIPLDVTHKVLISG 197
Query: 200 NFFVEFERRQNTYEAQYC 217
+ E +R + C
Sbjct: 198 D---EVQRLNQPVLSAIC 212
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 16/150 (10%)
Query: 504 LDSDTLYGLARDL---PRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEP 560
+++ G +R L P +P R E+ + G + DN + P AV + I++S+
Sbjct: 55 INAAVWRGCSRPLALTPSAPARLHGEDGL--GDAFDNAFSD-EAPGAV---QFIIDSVRA 108
Query: 561 G-SKITILTNGPLTNLAQIIG-LQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEF 618
+IT++ GPLTN+A I + +++++ I+GG G D GNV + ++EF
Sbjct: 109 QPHQITLMAIGPLTNIATAINQAPDIIPLVKELVIMGGAFGTDGHSGNV-----TPFSEF 163
Query: 619 NMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
N++ DP AA V S L + +IPL + +V
Sbjct: 164 NIWKDPHAADQVLASALNVVVIPLDVTHKV 193
>gi|409350385|ref|ZP_11233520.1| Inosine-uridine preferring nucleoside hydrolase [Lactobacillus
equicursoris CIP 110162]
gi|407877464|emb|CCK85578.1| Inosine-uridine preferring nucleoside hydrolase [Lactobacillus
equicursoris CIP 110162]
Length = 313
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 107/227 (47%), Gaps = 18/227 (7%)
Query: 540 PELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS-SSVIQDVYIVGGNK 598
P ++P +D+ I ++ P +T++ GPLT+LA+ + + S ++++Y +GG+
Sbjct: 101 PIAKKPAHLDMIDKIHKADGP---VTLVFTGPLTDLARALEIDPSIQDKVEELYWMGGSL 157
Query: 599 GQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKL 658
N GNVFT S E+N + DP A K V++SKL+I+ + L + ++
Sbjct: 158 ---NGHGNVFTPVSDDTQEWNAWWDPEACKTVWDSKLKIQQVGLESTEELPLTDEMRQHF 214
Query: 659 RDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKSL 718
+K P F L + + + Y L +VL + P + + KS
Sbjct: 215 NQNRKYPAFEFVGYLYSLVNSFEVDSTYY------LWDVL-TTMSALYPEIVTSRDTKS- 266
Query: 719 EIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEVLGDHK 765
++ +DG + G+ E G+ + ++ S N +++HF + + K
Sbjct: 267 DVYTDG--HRAGRFF-ETENGRPMTLVTSANYDKFWEHFDSLCKNAK 310
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 89/204 (43%), Gaps = 23/204 (11%)
Query: 13 GEGGILPNGTILPDVGGYQPIIDQGMSTAG--ECRYRQAIPVGQ--RLYVNTNYGLRK-A 67
G G +G + P V + IID+ E + P+ Q + +++ +
Sbjct: 31 GVGVTDADGYVEPGVSASRKIIDRFNQRGDKLEVARSNSRPINQFPEAWRVSSFSVDHFP 90
Query: 68 FLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHI 125
L + G P+ + A +I+ I + GP+T+ G T+ A L +P ++ +E +
Sbjct: 91 ILNETGVVKTPIAKKPAHLDMIDKIHKADGPVTLVFTGPLTDLARALEIDPSIQDKVEEL 150
Query: 126 YVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVT 185
Y MGG++ GN++ S+ E+N + DP A TV S + +
Sbjct: 151 YWMGGSLNGH----------------GNVFTPVSDDTQEWNAWWDPEACKTVWDSKLKIQ 194
Query: 186 IIPLDATKTIPVSENFFVEFERRQ 209
+ L++T+ +P+++ F + +
Sbjct: 195 QVGLESTEELPLTDEMRQHFNQNR 218
>gi|365903174|ref|ZP_09440997.1| ribonucleoside hydrolase RihC [Lactobacillus malefermentans KCTC
3548]
Length = 304
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 25/117 (21%)
Query: 78 PLRQPTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSD 135
P+++ +A L +AI A P IT+ GS+TN A+ P +K+NIE I MGG++
Sbjct: 98 PMKE-SAVIALRDAIMAAPEPITLVPTGSYTNIALLFSEYPEVKQNIERIVAMGGSLGKG 156
Query: 136 CFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
S AEFN+F+DP AA + SG+P+ ++ LD T
Sbjct: 157 NMTSA----------------------AEFNVFTDPHAAKIMYESGVPIVMVGLDIT 191
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 62/124 (50%), Gaps = 13/124 (10%)
Query: 542 LRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIG-LQNSSSVIQDVYIVGGNKGQ 600
+++ + + +I+ + EP IT++ G TN+A + I+ + +GG+ G
Sbjct: 99 MKESAVIALRDAIMAAPEP---ITLVPTGSYTNIALLFSEYPEVKQNIERIVAMGGSLG- 154
Query: 601 DNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRD 660
KGN+ + AEFN+F DP AAK ++ES + I ++ L + + + + KL
Sbjct: 155 ---KGNM-----TSAAEFNVFTDPHAAKIMYESGVPIVMVGLDITMKALLTHESIEKLPT 206
Query: 661 RKKT 664
+T
Sbjct: 207 LNET 210
>gi|333397147|ref|ZP_08478960.1| ribonucleoside hydrolase RihC [Leuconostoc gelidum KCTC 3527]
gi|406599009|ref|YP_006744355.1| ribonucleoside hydrolase RihC [Leuconostoc gelidum JB7]
gi|406370544|gb|AFS39469.1| ribonucleoside hydrolase RihC [Leuconostoc gelidum JB7]
Length = 310
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 64/142 (45%), Gaps = 26/142 (18%)
Query: 96 PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY 155
P+T+ GS+TN A+ + N+P L I+ +MGG++ GN+
Sbjct: 117 PMTIVATGSYTNIALLIQNHPELISQIKEFVLMGGSLSG-----------------GNV- 158
Query: 156 PDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQ 215
+ AEFNIF+DP AA V SGIP+ +I LD T +S + + N EA
Sbjct: 159 ----SSVAEFNIFTDPDAAAIVFKSGIPIVMIGLDVTLKALLSLD---TIDAVANIGEAG 211
Query: 216 YCFQSLKMIR-DTWSGSPPFHE 236
L D+ G P H+
Sbjct: 212 NMLHKLMTAYGDSEPGGKPMHD 233
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 17/99 (17%)
Query: 552 KSIVESIEPGSKITILTNGPLTNLAQIIGLQNSS---SVIQDVYIVGGNKGQDNEKGNVF 608
K + E+ EP +TI+ G TN+A +I QN S I++ ++GG+ GNV
Sbjct: 109 KVLSEAPEP---MTIVATGSYTNIALLI--QNHPELISQIKEFVLMGGSL----SGGNV- 158
Query: 609 TVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
S AEFN+F DP AA VF+S + I +I L + +
Sbjct: 159 ----SSVAEFNIFTDPDAAAIVFKSGIPIVMIGLDVTLK 193
>gi|302917141|ref|XP_003052381.1| hypothetical protein NECHADRAFT_79488 [Nectria haematococca mpVI
77-13-4]
gi|256733320|gb|EEU46668.1| hypothetical protein NECHADRAFT_79488 [Nectria haematococca mpVI
77-13-4]
Length = 318
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 69/150 (46%), Gaps = 25/150 (16%)
Query: 80 RQPT---AQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
R PT A +I I A P IT+ +G TN A+ L+ P +K I+ + +MGG
Sbjct: 99 RAPTPGYAPVAIIEHILANPGEITLVAIGPLTNVALALLLEPRIKSAIKELVIMGGVF-- 156
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKT 194
G +Y D EFN+FSDP AA TVL SGIP I LD T
Sbjct: 157 ----------------FGTMYSRDKP--GEFNVFSDPEAARTVLRSGIPQRWIGLDCTLR 198
Query: 195 IPVSENFFVEFERRQNTYEAQYCFQSLKMI 224
+ ++ E ++ +++ A ++K I
Sbjct: 199 VRLNMADAQELKKSSSSFAAFAGDATIKYI 228
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 11/99 (11%)
Query: 553 SIVESI--EPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEKGNVFT 609
+I+E I PG +IT++ GPLTN+A + L+ S I+++ I+GG G +++
Sbjct: 109 AIIEHILANPG-EITLVAIGPLTNVALALLLEPRIKSAIKELVIMGGVF-----FGTMYS 162
Query: 610 VPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
K EFN+F DP AA+ V S + + I L RV
Sbjct: 163 --RDKPGEFNVFSDPEAARTVLRSGIPQRWIGLDCTLRV 199
>gi|89055731|ref|YP_511182.1| inosine/uridine-preferring nucleoside hydrolase [Jannaschia sp.
CCS1]
gi|88865280|gb|ABD56157.1| Inosine/uridine-preferring nucleoside hydrolase [Jannaschia sp.
CCS1]
Length = 302
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 60/151 (39%), Gaps = 30/151 (19%)
Query: 95 GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNL 154
G +T+ +G TN A+ + P I I MGG I
Sbjct: 118 GTVTILALGPLTNLALLSRDAPEAYGRISRIIAMGGTIYQ-------------------- 157
Query: 155 YPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEA 214
P + P+ EFN+ +DP AA V H +PVT+IPLD T+ + + R A
Sbjct: 158 -PGNVGPHTEFNMAADPMAAQMVFHGPVPVTLIPLDVTRKLRATPADL----DRLAACGA 212
Query: 215 QYCFQSLKMIRDTWSG-----SPPFHEAYCM 240
+ +IR ++G S P H+ M
Sbjct: 213 PAATLAADLIRAYFAGNTDRTSRPLHDPCVM 243
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 104/255 (40%), Gaps = 49/255 (19%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M +PV+ D D D + ++ L P ++++ + + + T V LL GR
Sbjct: 1 MTRPVLIDTDPGLDDAVGILMALADP--RLDVRAVTSVAGNIGIATTTRNVGHLLAAAGR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DDI +A G P + G + ++ G+ D L G+ LP ++
Sbjct: 59 DDI------AYAAGAAGP----LTGDELSEEAIHGA------DGLGGVT--LPDPLKKPD 100
Query: 525 AENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQII-GLQN 583
+V A + D PE +TIL GPLTNLA +
Sbjct: 101 PGGAVSLLAERLLDAPE--------------------GTVTILALGPLTNLALLSRDAPE 140
Query: 584 SSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLH 643
+ I + +GG Q GNV + EFNM DP+AA+ VF + + LIPL
Sbjct: 141 AYGRISRIIAMGGTIYQ---PGNV-----GPHTEFNMAADPMAAQMVFHGPVPVTLIPLD 192
Query: 644 MQRRVASFFKILHKL 658
+ R++ + L +L
Sbjct: 193 VTRKLRATPADLDRL 207
>gi|418866574|ref|ZP_13421037.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 4176]
gi|392840484|gb|EJA96020.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 4176]
Length = 311
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 59/128 (46%), Gaps = 33/128 (25%)
Query: 67 AFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEH 124
+F PQ G TA +++ + S+ P+T+ G TN A+ L ++P L I
Sbjct: 96 SFAPQSG---------TAVELMAKTLRESSQPVTIVSTGPQTNVALLLNSHPELHTKIAR 146
Query: 125 IYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPV 184
I +MGGA+ +GN P AEFNI+ DP AA V SGIPV
Sbjct: 147 IVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAEIVFQSGIPV 184
Query: 185 TIIPLDAT 192
+ LD T
Sbjct: 185 VMAGLDVT 192
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 112/271 (41%), Gaps = 53/271 (19%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + +K I S+ T+ V +L ++ R
Sbjct: 1 MALPIIIDCDPGHDDAIALVLALASPE--LEVKAITSSAGNQTPEKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 PDIPV------AGGAVKPLM----------------HELIIADNVHGESGLDGPALP--- 93
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
E S A Q EL K++ ES +P +TI++ GP TN+A ++
Sbjct: 94 --EPSF---APQSGTAVELMA-------KTLRESSQP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+ I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHTKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLRDRKKTPESVFSQRL 673
+ + + + RD ++ ++ L
Sbjct: 190 DVTHKAQIHAADIERFRDIGNPISTIVAELL 220
>gi|418905327|ref|ZP_13459354.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIGC345D]
gi|377764627|gb|EHT88477.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIGC345D]
Length = 305
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 73/173 (42%), Gaps = 34/173 (19%)
Query: 78 PLRQPTA---QQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAI 132
P RQ A V+IN + S P+T+ G TN A L+ P + ++IE I +MGG
Sbjct: 91 PSRQAVAMPASDVIINKVMTSDTPVTIVATGPLTNVATALIREPRIAEHIESITLMGGG- 149
Query: 133 RSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
+ GN P AEFNI+ D AA V SGI + + LD T
Sbjct: 150 -----------------TFGNW-----TPTAEFNIWVDAEAAKRVFESGITINVFGLDVT 187
Query: 193 KTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWS-----GSPPFHEAYCM 240
+ ++ FE N AQ+ + L+ + T+ P H+A +
Sbjct: 188 HQVLADDHVIERFESINNPV-AQFVVELLQFFKKTYKTHFNMDGGPIHDACTI 239
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 543 RQPLAVDVWKSIVESI-EPGSKITILTNGPLTNLAQ-IIGLQNSSSVIQDVYIVGGNKGQ 600
RQ +A+ I+ + + +TI+ GPLTN+A +I + I+ + ++GG
Sbjct: 93 RQAVAMPASDVIINKVMTSDTPVTIVATGPLTNVATALIREPRIAEHIESITLMGGGT-- 150
Query: 601 DNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRD 660
GN + AEFN+++D AAK VFES + I + L + +V + ++ + +
Sbjct: 151 ---FGN-----WTPTAEFNIWVDAEAAKRVFESGITINVFGLDVTHQVLADDHVIERF-E 201
Query: 661 RKKTPESVFSQRLLQGLMTLQQSH 684
P + F LLQ ++H
Sbjct: 202 SINNPVAQFVVELLQFFKKTYKTH 225
>gi|418282813|ref|ZP_12895571.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus 21202]
gi|365168897|gb|EHM60231.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus 21202]
Length = 311
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 73/173 (42%), Gaps = 34/173 (19%)
Query: 78 PLRQPTA---QQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAI 132
P RQ A V+IN + S P+T+ G TN A L+ P + ++IE I +MGG
Sbjct: 97 PSRQAVAMPASDVIINKVMTSDTPVTIVATGPLTNVATALIREPRIAEHIESITLMGGG- 155
Query: 133 RSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
+ GN P AEFNI+ D AA V SGI + + LD T
Sbjct: 156 -----------------TFGNW-----TPTAEFNIWVDAEAAKRVFESGITINVFGLDVT 193
Query: 193 KTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWS-----GSPPFHEAYCM 240
+ ++ FE N AQ+ + L+ + T+ P H+A +
Sbjct: 194 HQVLADDHVIERFESINNPV-AQFVVELLQFFKKTYKTHFNMDGGPIHDACTI 245
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 114/283 (40%), Gaps = 55/283 (19%)
Query: 405 MGKPVVFDIDMSAGDFLALIYL--LKLPVELINLKGILVSSTGWATSATVDVVYDLLHMM 462
M + ++ D D D +ALI + P+E++ + + + + ++L +M
Sbjct: 1 MKRKIIMDCDPGHDDAIALILAGAIDSPLEILAVTTV---AGNQSVDKNTTNALNVLDIM 57
Query: 463 GRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRR 522
GR DI V G P I +A I SG LD LP +P R
Sbjct: 58 GRQDIAVAKG---------ADRPLIKPAAFAYEIHGESG--LD-------GPKLPATPSR 99
Query: 523 YTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQ-IIGL 581
+ P + + ++ S P +TI+ GPLTN+A +I
Sbjct: 100 QA-----------------VAMPASDVIINKVMTSDTP---VTIVATGPLTNVATALIRE 139
Query: 582 QNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
+ I+ + ++GG GN + AEFN+++D AAK VFES + I +
Sbjct: 140 PRIAEHIESITLMGGGTF-----GN-----WTPTAEFNIWVDAEAAKRVFESGITINVFG 189
Query: 642 LHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSH 684
L + +V + ++ + + P + F LLQ ++H
Sbjct: 190 LDVTHQVLADDHVIERF-ESINNPVAQFVVELLQFFKKTYKTH 231
>gi|242242361|ref|ZP_04796806.1| possible ribosylpyrimidine nucleosidase [Staphylococcus epidermidis
W23144]
gi|416124506|ref|ZP_11595502.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis FRI909]
gi|418327992|ref|ZP_12939123.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus
epidermidis 14.1.R1.SE]
gi|420175149|ref|ZP_14681594.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIHLM061]
gi|420177524|ref|ZP_14683860.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIHLM057]
gi|420180176|ref|ZP_14686431.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIHLM053]
gi|420192892|ref|ZP_14698749.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIHLM023]
gi|420198872|ref|ZP_14704556.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIHLM031]
gi|420234232|ref|ZP_14738800.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIH051475]
gi|242234168|gb|EES36480.1| possible ribosylpyrimidine nucleosidase [Staphylococcus epidermidis
W23144]
gi|319401616|gb|EFV89826.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis FRI909]
gi|365232435|gb|EHM73432.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus
epidermidis 14.1.R1.SE]
gi|394244435|gb|EJD89780.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIHLM061]
gi|394247908|gb|EJD93150.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIHLM057]
gi|394251215|gb|EJD96314.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIHLM053]
gi|394260708|gb|EJE05517.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIHLM023]
gi|394272558|gb|EJE17008.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIHLM031]
gi|394304466|gb|EJE47868.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIH051475]
Length = 302
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 37/186 (19%)
Query: 85 QQVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQ 144
+ +L+N + P+T+ +G TN AI L + P ++ I+ I +MGG+
Sbjct: 109 RNLLVN--TQEPLTLIAIGPLTNIAILLTSYPEVQPFIKEIVLMGGSTGR---------- 156
Query: 145 SEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVE 204
GN+ P AEFNI+ DP AA V +SG+P+T+I LD + + +F +
Sbjct: 157 -------GNV-----TPLAEFNIYCDPEAAQIVFNSGLPLTMIGLDLAREALFTHHFVKD 204
Query: 205 FERRQNTYEAQY-CFQSLKMIRDTWSGSPPFHEAYCMWDSFMAGVALSIMLNSSSHNGEN 263
F+ T Y FQ K S F + ++D F + +L+ + N +
Sbjct: 205 FKDTNATSSMLYNLFQHYK--------SEDFDIGFKLYDVF----TILYLLDPEAFNVKE 252
Query: 264 ACSEME 269
A +++E
Sbjct: 253 AYTQIE 258
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 15/138 (10%)
Query: 535 QDNDDPELRQPLAVDVWKSI-VESIEPGSKITILTNGPLTNLAQII-GLQNSSSVIQDVY 592
Q N D +L AV+ +++ V + EP +T++ GPLTN+A ++ I+++
Sbjct: 93 QINQD-DLTSIHAVEAMRNLLVNTQEP---LTLIAIGPLTNIAILLTSYPEVQPFIKEIV 148
Query: 593 IVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFF 652
++GG+ G +GNV + AEFN++ DP AA+ VF S L + +I L + R
Sbjct: 149 LMGGSTG----RGNV-----TPLAEFNIYCDPEAAQIVFNSGLPLTMIGLDLAREALFTH 199
Query: 653 KILHKLRDRKKTPESVFS 670
+ +D T +++
Sbjct: 200 HFVKDFKDTNATSSMLYN 217
>gi|407719009|ref|YP_006796414.1| ribonucleoside hydrolase RihC [Leuconostoc carnosum JB16]
gi|407242765|gb|AFT82415.1| ribonucleoside hydrolase RihC [Leuconostoc carnosum JB16]
Length = 310
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 31/119 (26%)
Query: 83 TAQQVLINAISA---------GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIR 133
T Q + I+A+SA P+T+ GS+TN A+ + +P L I+ +MGG++
Sbjct: 95 TTQALTIDAVSAMAKVLSEAPEPMTIVATGSYTNIALLIQKHPDLLNKIKQFVLMGGSLS 154
Query: 134 SDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
GN+ + AEFNIF+DP AA V SG+P+ +I LD T
Sbjct: 155 G-----------------GNV-----SSVAEFNIFTDPDAAKIVFKSGVPIVMIGLDVT 191
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 63/133 (47%), Gaps = 30/133 (22%)
Query: 544 QPLAVDVWKSIVESI-EPGSKITILTNGPLTNLAQII----GLQNSSSVIQDVYIVGGNK 598
Q L +D ++ + + E +TI+ G TN+A +I L N I+ ++GG+
Sbjct: 97 QALTIDAVSAMAKVLSEAPEPMTIVATGSYTNIALLIQKHPDLLNK---IKQFVLMGGSL 153
Query: 599 GQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEI----------KLIPLHMQRRV 648
GNV S AEFN+F DP AAK VF+S + I L+ LH V
Sbjct: 154 ----SGGNV-----SSVAEFNIFTDPDAAKIVFKSGVPIVMIGLDVTLKALLSLHTIDAV 204
Query: 649 ASF---FKILHKL 658
AS K+LH+L
Sbjct: 205 ASLGEAGKMLHQL 217
>gi|418992975|ref|ZP_13540616.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIG290]
gi|377747960|gb|EHT71923.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIG290]
Length = 305
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 73/173 (42%), Gaps = 34/173 (19%)
Query: 78 PLRQPTA---QQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAI 132
P RQ A V+IN + S P+T+ G TN A L+ P + ++IE I +MGG
Sbjct: 91 PSRQAVAMPASDVIINKVMTSDTPVTIVATGPLTNVATALIREPRIAEHIESITLMGGG- 149
Query: 133 RSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
+ GN P AEFNI+ D AA V SGI + + LD T
Sbjct: 150 -----------------TFGNW-----TPTAEFNIWVDAEAAKRVFESGITINVFGLDVT 187
Query: 193 KTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWS-----GSPPFHEAYCM 240
+ ++ FE N AQ+ + L+ + T+ P H+A +
Sbjct: 188 HQVLADDHVIERFESINNPV-AQFVVELLQFFKKTYKTHFNMDGGPIHDACTI 239
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 543 RQPLAVDVWKSIVESI-EPGSKITILTNGPLTNLAQ-IIGLQNSSSVIQDVYIVGGNKGQ 600
RQ +A+ I+ + + +TI+ GPLTN+A +I + I+ + ++GG
Sbjct: 93 RQAVAMPASDVIINKVMTSDTPVTIVATGPLTNVATALIREPRIAEHIESITLMGGGT-- 150
Query: 601 DNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRD 660
GN + AEFN+++D AAK VFES + I + L + +V + ++ + +
Sbjct: 151 ---FGN-----WTPTAEFNIWVDAEAAKRVFESGITINVFGLDVTHQVLADDHVIERF-E 201
Query: 661 RKKTPESVFSQRLLQGLMTLQQSH 684
P + F LLQ ++H
Sbjct: 202 SINNPVAQFVVELLQFFKKTYKTH 225
>gi|256851750|ref|ZP_05557138.1| inosine-uridine preferring nucleoside hydrolase [Lactobacillus
jensenii 27-2-CHN]
gi|260661533|ref|ZP_05862445.1| inosine-uridine nucleoside N-ribohydrolase [Lactobacillus jensenii
115-3-CHN]
gi|256615708|gb|EEU20897.1| inosine-uridine preferring nucleoside hydrolase [Lactobacillus
jensenii 27-2-CHN]
gi|260547590|gb|EEX23568.1| inosine-uridine nucleoside N-ribohydrolase [Lactobacillus jensenii
115-3-CHN]
Length = 321
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 111/258 (43%), Gaps = 48/258 (18%)
Query: 407 KPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDD 466
K V+ ID D +AL Y+L + ++L GI+ + T V LL M+GR D
Sbjct: 7 KKVILSIDTGIDDAMALAYVLG--SKELDLIGIVGTYGNVYTKQGVKNDLALLEMLGRKD 64
Query: 467 IPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAE 526
IPV LG+ A+ + + + + + G G + + +P + R+
Sbjct: 65 IPVYLGNEHAIDKDDFEVSEVSADIH------GQNGIGEVE--------VPAATRQVETG 110
Query: 527 NSVRFGASQDNDDPELRQPLAVDVWKSIVESIEP-GSKITILTNGPLTNLAQIIGLQNS- 584
+ V F I++S++ G +T++ GP+T+LA+ + +
Sbjct: 111 DGVDF----------------------IIDSVKKYGKDLTVIATGPMTDLARTLKKYPAF 148
Query: 585 SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHM 644
+ V I+GG GNV + YAE N+ DPLAAK +FES + ++ L +
Sbjct: 149 KDEVGQVVIMGGALAC---TGNV-----TPYAEANIHQDPLAAKILFESGTPVIMVGLDV 200
Query: 645 QRRVASFFKILHKLRDRK 662
R + K RD K
Sbjct: 201 TMRTPISLEDTQKWRDTK 218
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 76/198 (38%), Gaps = 49/198 (24%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQRLYVNT 60
M+ R DIPV +G E I + + +V G + GE +P R V T
Sbjct: 59 MLGRKDIPVYLGNEHAIDKDDFEVSEVSADI----HGQNGIGEVE----VPAATR-QVET 109
Query: 61 NYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKK 120
G+ F+ +KY +TV G T+ A L P K
Sbjct: 110 GDGVD--FIIDSVKKYGK-----------------DLTVIATGPMTDLARTLKKYPAFKD 150
Query: 121 NIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHS 180
+ + +MGGA+ C GN+ PYAE NI DP AA + S
Sbjct: 151 EVGQVVIMGGAL--------------AC--TGNV-----TPYAEANIHQDPLAAKILFES 189
Query: 181 GIPVTIIPLDATKTIPVS 198
G PV ++ LD T P+S
Sbjct: 190 GTPVIMVGLDVTMRTPIS 207
>gi|421149025|ref|ZP_15608684.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus aureus subsp. aureus str. Newbould 305]
gi|394331127|gb|EJE57215.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus aureus subsp. aureus str. Newbould 305]
Length = 305
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 75/173 (43%), Gaps = 34/173 (19%)
Query: 78 PLRQPTA---QQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAI 132
P RQ A V+IN + S P+T+ G TN A L+ P + ++IE I +MGG
Sbjct: 91 PSRQAVAMPASDVIINKVMTSDTPVTIVATGPLTNVATALIREPRIAEHIESITLMGGG- 149
Query: 133 RSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
+ GN P AEFNI+ D AA V SGI + + LD T
Sbjct: 150 -----------------TFGNW-----TPTAEFNIWVDAEAAKRVFESGITINVFGLDVT 187
Query: 193 KTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWS-----GSPPFHEAYCM 240
+ +++N +E N AQ+ + L+ + T+ P H+A +
Sbjct: 188 HQV-LADNHVIERFESINNPVAQFVVELLQFFKKTYKTHFNMDGGPIHDACTI 239
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 18/154 (11%)
Query: 538 DDPEL-----RQPLAVDVWKSIVESI-EPGSKITILTNGPLTNLAQ-IIGLQNSSSVIQD 590
D P+L RQ +A+ I+ + + +TI+ GPLTN+A +I + I+
Sbjct: 83 DGPKLPSTPSRQAVAMPASDVIINKVMTSDTPVTIVATGPLTNVATALIREPRIAEHIES 142
Query: 591 VYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVAS 650
+ ++GG GN + AEFN+++D AAK VFES + I + L + +V +
Sbjct: 143 ITLMGGGT-----FGN-----WTPTAEFNIWVDAEAAKRVFESGITINVFGLDVTHQVLA 192
Query: 651 FFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSH 684
++ + + P + F LLQ ++H
Sbjct: 193 DNHVIERF-ESINNPVAQFVVELLQFFKKTYKTH 225
>gi|440759248|ref|ZP_20938394.1| Inosine-uridine preferring nucleoside hydrolase [Pantoea
agglomerans 299R]
gi|436426951|gb|ELP24642.1| Inosine-uridine preferring nucleoside hydrolase [Pantoea
agglomerans 299R]
Length = 306
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 23/138 (16%)
Query: 82 PTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNS 139
P A Q +I+++ A P IT+ +G TN A + P + ++ + +MGGA +D +
Sbjct: 96 PGAVQFIIDSVRAQPHQITLVAIGPLTNIATAINQAPDIIPLVKELVIMGGAFGTDGHS- 154
Query: 140 TNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSE 199
GN+ P++EFNI+ DP AA VL S + V +IPLD T + +S
Sbjct: 155 ------------GNV-----TPFSEFNIWKDPHAADQVLASALNVVVIPLDVTHKVLISS 197
Query: 200 NFFVEFERRQNTYEAQYC 217
+ E +R + C
Sbjct: 198 D---EVKRLNQPVLSAIC 212
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 16/150 (10%)
Query: 504 LDSDTLYGLARDL---PRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEP 560
++++ G +R L P +P R E+ G + DN + P AV + I++S+
Sbjct: 55 INAEVYRGCSRPLALAPSAPARLHGEDG--LGDAFDNTCSD-EAPGAV---QFIIDSVRA 108
Query: 561 G-SKITILTNGPLTNLAQIIG-LQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEF 618
+IT++ GPLTN+A I + +++++ I+GG G D GNV + ++EF
Sbjct: 109 QPHQITLVAIGPLTNIATAINQAPDIIPLVKELVIMGGAFGTDGHSGNV-----TPFSEF 163
Query: 619 NMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
N++ DP AA V S L + +IPL + +V
Sbjct: 164 NIWKDPHAADQVLASALNVVVIPLDVTHKV 193
>gi|294677255|ref|YP_003577870.1| pyrimidine-specific ribonucleoside hydrolase RihA [Rhodobacter
capsulatus SB 1003]
gi|294476075|gb|ADE85463.1| pyrimidine-specific ribonucleoside hydrolase RihA [Rhodobacter
capsulatus SB 1003]
Length = 311
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 62/139 (44%), Gaps = 27/139 (19%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISA---GPITVFVMGSHTNFAIFLM 113
YV+ GL LP+ L+ A LI + A G +T+ +G TN A
Sbjct: 80 YVHGKTGLDGIALPE---PTMALQDRHAVDFLIETLRAEAPGTVTLCPLGPLTNIATAFR 136
Query: 114 NNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFA 173
P + +E I +MGGA +GN + P AEFNI+ DP A
Sbjct: 137 RAPEIVSKVERIVLMGGAYFE----------------VGN-----TTPAAEFNIYVDPQA 175
Query: 174 AYTVLHSGIPVTIIPLDAT 192
A V SG+P+ ++PLDAT
Sbjct: 176 AEIVFKSGVPLVVVPLDAT 194
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 15/112 (13%)
Query: 547 AVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGN 606
AVD + + PG+ +T+ GPLTN+A + + ++ V + G E GN
Sbjct: 104 AVDFLIETLRAEAPGT-VTLCPLGPLTNIAT--AFRRAPEIVSKVERIVLMGGAYFEVGN 160
Query: 607 VFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLH-------MQRRVASF 651
T P+ AEFN+++DP AA+ VF+S + + ++PL + R+A+F
Sbjct: 161 --TTPA---AEFNIYVDPQAAEIVFKSGVPLVVVPLDATHKALTTRPRIAAF 207
>gi|120597596|ref|YP_962170.1| ribonucleoside hydrolase 1 [Shewanella sp. W3-18-1]
gi|386315002|ref|YP_006011167.1| ribosylpyrimidine nucleosidase [Shewanella putrefaciens 200]
gi|120557689|gb|ABM23616.1| Purine nucleosidase [Shewanella sp. W3-18-1]
gi|319427627|gb|ADV55701.1| Ribosylpyrimidine nucleosidase [Shewanella putrefaciens 200]
Length = 318
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 69/166 (41%), Gaps = 31/166 (18%)
Query: 51 PVGQRLYVNTNY----GLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGS 104
P+ + L + N GL LP P+ TA +++ I S P+T+ G
Sbjct: 70 PLARELIIADNVHGETGLDGPVLPNPSFSPQPI---TAVELMAQQIRHSTKPVTLIPTGP 126
Query: 105 HTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAE 164
TN A+ L ++ L IE I +MGGA +GN P AE
Sbjct: 127 LTNIALLLASHSELHHKIERIVLMGGAA-----------------GVGNW-----TPAAE 164
Query: 165 FNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQN 210
FNIF DP AA V SGIP+T+ LD T + + QN
Sbjct: 165 FNIFVDPEAADIVFKSGIPITMCGLDVTHQAQIMDEDIERIRAIQN 210
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 108/264 (40%), Gaps = 67/264 (25%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M +P++ D D D +ALI L P EL+ L + S+ T++ +L ++ R
Sbjct: 1 MTRPIILDCDPGHDDAIALILALAHP-ELVPL-AVTTSAGNQTPDKTLNNALRILTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV A G + P LAR+L
Sbjct: 59 GDIPV------AGGAIKP-----------------------------LAREL------II 77
Query: 525 AENSVRFGASQDNDDPELRQP-------LAVDVW-KSIVESIEPGSKITILTNGPLTNLA 576
A+N D P L P AV++ + I S +P +T++ GPLTN+A
Sbjct: 78 ADN---VHGETGLDGPVLPNPSFSPQPITAVELMAQQIRHSTKP---VTLIPTGPLTNIA 131
Query: 577 QIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ + I+ + ++GG G N + AEFN+F+DP AA VF+S +
Sbjct: 132 LLLASHSELHHKIERIVLMGGAAGVGN---------WTPAAEFNIFVDPEAADIVFKSGI 182
Query: 636 EIKLIPLHMQRRVASFFKILHKLR 659
I + L + + + + ++R
Sbjct: 183 PITMCGLDVTHQAQIMDEDIERIR 206
>gi|283768779|ref|ZP_06341690.1| inosine-uridine preferring nucleoside hydrolase [Bulleidia extructa
W1219]
gi|283104565|gb|EFC05938.1| inosine-uridine preferring nucleoside hydrolase [Bulleidia extructa
W1219]
Length = 316
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 48/97 (49%), Gaps = 22/97 (22%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
+T+ G TN A L+ +P LK+ IE I +MGG +++ GN
Sbjct: 119 VTIVATGPLTNVAELLLAHPELKEKIERISIMGGGLKN-----------------GNW-- 159
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
P AEFNIF DP AA V SGIP+ + LD T+
Sbjct: 160 ---TPAAEFNIFEDPEAAAIVFQSGIPLIMCGLDVTE 193
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 24/169 (14%)
Query: 514 RDLPRSPRRYTAENSVRFGASQDNDDPELRQPL--------AVDVWKSIVESIEPGSKIT 565
R++P TA N F D P L +P+ + K + ES E +T
Sbjct: 67 REVPLMSDLITAGN---FHGESGLDGPALPEPVMNLSSLSSVSLMAKVLKESEE---AVT 120
Query: 566 ILTNGPLTNLAQII-GLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDP 624
I+ GPLTN+A+++ I+ + I+GG N + AEFN+F DP
Sbjct: 121 IVATGPLTNVAELLLAHPELKEKIERISIMGGGLKNGN---------WTPAAEFNIFEDP 171
Query: 625 LAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRL 673
AA VF+S + + + L + + + + K+R K ++ + L
Sbjct: 172 EAAAIVFQSGIPLIMCGLDVTEKAIVYPEDGQKIRSVKNQVATIVADWL 220
>gi|309777633|ref|ZP_07672583.1| inosine-uridine preferring nucleoside hydrolase
[Erysipelotrichaceae bacterium 3_1_53]
gi|308914537|gb|EFP60327.1| inosine-uridine preferring nucleoside hydrolase
[Erysipelotrichaceae bacterium 3_1_53]
Length = 306
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 72/174 (41%), Gaps = 38/174 (21%)
Query: 79 LRQPTAQQVLINAI---------SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMG 129
+PT Q + NA+ S P+T+ + TN A+ L P +K+NI+ I +MG
Sbjct: 93 FEEPTQQPLKENAVDAMRSVIMSSTEPVTLVPIAPLTNIALLLKTYPEVKENIQEIVLMG 152
Query: 130 GAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPL 189
G+ S GN AEFNI DP AA+ V HSG+ +T++ L
Sbjct: 153 GSA-----------------SRGN-----KGVMAEFNIALDPEAAHMVFHSGVKLTMVGL 190
Query: 190 DATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPFHEAYCMWDS 243
D V E T E YC + + GS FH M+D+
Sbjct: 191 DVGLKALVLPQDSEEIRTMNKTGEMAYC-----LFKKYRGGS--FHTGLKMYDA 237
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 77/157 (49%), Gaps = 19/157 (12%)
Query: 521 RRYTAENSVRFGASQDNDDPE--LRQPL---AVDVWKSIV-ESIEPGSKITILTNGPLTN 574
R Y SV + + D E +QPL AVD +S++ S EP +T++ PLTN
Sbjct: 74 REYEDAASVHGKSGMEGFDFEEPTQQPLKENAVDAMRSVIMSSTEP---VTLVPIAPLTN 130
Query: 575 LAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFES 633
+A ++ IQ++ ++GG+ + N KG + AEFN+ LDP AA VF S
Sbjct: 131 IALLLKTYPEVKENIQEIVLMGGSASRGN-KGVM--------AEFNIALDPEAAHMVFHS 181
Query: 634 KLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFS 670
+++ ++ L + + + ++R KT E +
Sbjct: 182 GVKLTMVGLDVGLKALVLPQDSEEIRTMNKTGEMAYC 218
>gi|227485824|ref|ZP_03916140.1| possible ribosylpyrimidine nucleosidase [Anaerococcus lactolyticus
ATCC 51172]
gi|227236202|gb|EEI86217.1| possible ribosylpyrimidine nucleosidase [Anaerococcus lactolyticus
ATCC 51172]
Length = 313
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 26/130 (20%)
Query: 91 AISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDS 150
+ + IT+ +G TN A+ + P KNIE I +MGG ++
Sbjct: 112 TLKSKKITIVAIGPLTNIALLIKTYPEYIKNIEEIVIMGGGLQK---------------- 155
Query: 151 IGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFER-RQ 209
GN+ YAEFN ++DP AA V SGI +T+ LD T+ + E E+E+ ++
Sbjct: 156 -GNV-----TDYAEFNFYADPEAAKIVFDSGIKITLFSLDVTEDAYLLER---EYEQLKK 206
Query: 210 NTYEAQYCFQ 219
Y A+ F+
Sbjct: 207 GNYLAKAMFE 216
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 22/100 (22%)
Query: 548 VDVWKSIVESIEPGSKITILTNGPLTNLAQIIG-----LQNSSSVIQDVYIVGGNKGQDN 602
+D +K ++S KITI+ GPLTN+A +I ++N I+++ I+GG
Sbjct: 106 IDFYKETLKS----KKITIVAIGPLTNIALLIKTYPEYIKN----IEEIVIMGGGL---- 153
Query: 603 EKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+KGNV + YAEFN + DP AAK VF+S ++I L L
Sbjct: 154 QKGNV-----TDYAEFNFYADPEAAKIVFDSGIKITLFSL 188
>gi|157374188|ref|YP_001472788.1| ribonucleoside hydrolase 1 [Shewanella sediminis HAW-EB3]
gi|157316562|gb|ABV35660.1| Purine nucleosidase [Shewanella sediminis HAW-EB3]
Length = 312
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 47/97 (48%), Gaps = 22/97 (22%)
Query: 96 PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY 155
P+T+ G TN AI L ++P L IE I +MGGA +GN
Sbjct: 118 PVTLVPTGPLTNIAILLTSHPELHDKIERIVLMGGAA-----------------GVGNW- 159
Query: 156 PDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
P AEFNI+ DP AA V SGIP+T+ LD T
Sbjct: 160 ----TPAAEFNIYVDPEAADIVFKSGIPITMCGLDVT 192
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 101/261 (38%), Gaps = 61/261 (23%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M +P++ D D D +ALI L L + + S+ T++ +L ++GR
Sbjct: 1 MTRPIILDCDPGHDDAIALI--LALSTDAFTPLAVTTSAGNQTPDKTLNNALRVLTLLGR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV GG + LAR+L
Sbjct: 59 SDIPVA-----------------GGAQKP------------------LAREL------II 77
Query: 525 AENSVRFGASQDNDDPELRQPLAVDVWKSIVESI-----EPGSKITILTNGPLTNLAQII 579
A+N D P+L P V + +E + E +T++ GPLTN+A ++
Sbjct: 78 ADN---VHGETGLDGPKLPDPGFDPVSMTAIELMALKLRESQVPVTLVPTGPLTNIAILL 134
Query: 580 GLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIK 638
I+ + ++GG G N + AEFN+++DP AA VF+S + I
Sbjct: 135 TSHPELHDKIERIVLMGGAAGVGN---------WTPAAEFNIYVDPEAADIVFKSGIPIT 185
Query: 639 LIPLHMQRRVASFFKILHKLR 659
+ L + + + ++R
Sbjct: 186 MCGLDVTHEAQIMDEDIERIR 206
>gi|146294265|ref|YP_001184689.1| ribonucleoside hydrolase 1 [Shewanella putrefaciens CN-32]
gi|145565955|gb|ABP76890.1| Purine nucleosidase [Shewanella putrefaciens CN-32]
Length = 318
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 69/166 (41%), Gaps = 31/166 (18%)
Query: 51 PVGQRLYVNTNY----GLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGS 104
P+ + L + N GL LP P+ TA +++ I S P+T+ G
Sbjct: 70 PLARELIIADNVHGETGLDGPVLPNPSFSPQPI---TAVELMAQQIRHSTKPVTLIPTGP 126
Query: 105 HTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAE 164
TN A+ L ++ L IE I +MGGA +GN P AE
Sbjct: 127 LTNIALLLASHSELHHKIERIVLMGGAA-----------------GVGNW-----TPAAE 164
Query: 165 FNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQN 210
FNIF DP AA V SGIP+T+ LD T + + QN
Sbjct: 165 FNIFVDPEAADIVFKSGIPITMCGLDVTHQAQIMDEDIERIRAIQN 210
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 108/264 (40%), Gaps = 67/264 (25%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M +P++ D D D +ALI L P EL+ L + S+ T++ +L ++ R
Sbjct: 1 MTRPIILDCDPGHDDAIALILALAHP-ELVPL-AVTTSAGNQTPDKTLNNALRILTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV A G + P LAR+L
Sbjct: 59 SDIPV------AGGAIKP-----------------------------LAREL------II 77
Query: 525 AENSVRFGASQDNDDPELRQP-------LAVDVW-KSIVESIEPGSKITILTNGPLTNLA 576
A+N D P L P AV++ + I S +P +T++ GPLTN+A
Sbjct: 78 ADN---VHGETGLDGPVLPNPSFSPQPITAVELMAQQIRHSTKP---VTLIPTGPLTNIA 131
Query: 577 QIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ + I+ + ++GG G N + AEFN+F+DP AA VF+S +
Sbjct: 132 LLLASHSELHHKIERIVLMGGAAGVGN---------WTPAAEFNIFVDPEAADIVFKSGI 182
Query: 636 EIKLIPLHMQRRVASFFKILHKLR 659
I + L + + + + ++R
Sbjct: 183 PITMCGLDVTHQAQIMDEDIERIR 206
>gi|418662261|ref|ZP_13223813.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus IS-122]
gi|375036643|gb|EHS29708.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus IS-122]
Length = 311
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 75/173 (43%), Gaps = 34/173 (19%)
Query: 78 PLRQPTA---QQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAI 132
P RQ A V+IN + S P+T+ G TN A L+ P + ++IE I +MGG
Sbjct: 97 PSRQAVAMPASDVIINKVMTSDTPVTIVATGPLTNVATALIREPRIAEHIESITLMGGG- 155
Query: 133 RSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
+ GN P AEFNI+ D AA V SGI + + LD T
Sbjct: 156 -----------------TFGNW-----TPTAEFNIWVDAEAAKRVFESGITINVFGLDVT 193
Query: 193 KTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWS-----GSPPFHEAYCM 240
+ +++N +E N AQ+ + L+ + T+ P H+A +
Sbjct: 194 HQV-LADNHVIERFESINNPVAQFVVELLQFFKKTYKTHFNMDGGPIHDACTI 245
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 114/283 (40%), Gaps = 55/283 (19%)
Query: 405 MGKPVVFDIDMSAGDFLALIYL--LKLPVELINLKGILVSSTGWATSATVDVVYDLLHMM 462
M + ++ D D D +ALI + P+E++ + + + + ++L +M
Sbjct: 1 MKRKIIMDCDPGHDDAIALILAGAIDSPLEILAVTTV---AGNQSVDKNTTNALNVLDIM 57
Query: 463 GRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRR 522
GR DI V G P I +A I SG LD LP +P R
Sbjct: 58 GRQDIAVAKG---------ADRPLIKPAAFASEIHGESG--LD-------GPKLPSTPSR 99
Query: 523 YTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQ-IIGL 581
+ P + + ++ S P +TI+ GPLTN+A +I
Sbjct: 100 QA-----------------VAMPASDVIINKVMTSDTP---VTIVATGPLTNVATALIRE 139
Query: 582 QNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
+ I+ + ++GG GN + AEFN+++D AAK VFES + I +
Sbjct: 140 PRIAEHIESITLMGGGTF-----GN-----WTPTAEFNIWVDAEAAKRVFESGITINVFG 189
Query: 642 LHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSH 684
L + +V + ++ + + P + F LLQ ++H
Sbjct: 190 LDVTHQVLADNHVIERF-ESINNPVAQFVVELLQFFKKTYKTH 231
>gi|302187354|ref|ZP_07264027.1| inosine-uridine preferring nucleoside hydrolase [Pseudomonas
syringae pv. syringae 642]
Length = 330
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 5/111 (4%)
Query: 93 SAGPITVFVMGSHTNFA--IFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDS 150
S PIT+ +G TN A + L P K +E I M GA+ D N + ++
Sbjct: 120 SQDPITLLSLGGFTNIAKMLALSGQPADFKMLEQIVAMAGAVYVDG-NVAALNNAQIAWD 178
Query: 151 IGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENF 201
G Y SN YAE+N+F DP AA V S +P+T++PLD I + ++
Sbjct: 179 QGETY--SSNHYAEWNVFVDPVAANNVFQSSLPLTLVPLDVCNQIILDASY 227
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 119/263 (45%), Gaps = 61/263 (23%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLL---HM 461
M + V+ D DM D L++ YL+K P I++ GI V+ G D+ + ++ H+
Sbjct: 1 MNRKVIIDTDMGWDDVLSIAYLMKRPD--IDILGITVTGCG-----ETDLGWGVIIAQHL 53
Query: 462 MGRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPR 521
+G I LG V A G P +Y P D + + GL L +P
Sbjct: 54 LG---IGNRLGTVVAKGTDQP-------LEYDNRFPQPFKN--DMNDIMGLLGTL--NPA 99
Query: 522 RYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSK-ITILTNGPLTNLAQIIG 580
PEL ++ W+ + ++++ IT+L+ G TN+A+++
Sbjct: 100 AL----------------PELS---SLPAWEFMYQTVKNSQDPITLLSLGGFTNIAKMLA 140
Query: 581 L----------QNSSSVIQDVYIVGGNKGQDN-----EKGNVFTVPSSKYAEFNMFLDPL 625
L + ++ VY+ G +N ++G ++ S+ YAE+N+F+DP+
Sbjct: 141 LSGQPADFKMLEQIVAMAGAVYVDGNVAALNNAQIAWDQGETYS--SNHYAEWNVFVDPV 198
Query: 626 AAKAVFESKLEIKLIPLHMQRRV 648
AA VF+S L + L+PL + ++
Sbjct: 199 AANNVFQSSLPLTLVPLDVCNQI 221
>gi|15923233|ref|NP_370767.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus Mu50]
gi|15925946|ref|NP_373479.1| hypothetical protein SA0234 [Staphylococcus aureus subsp. aureus
N315]
gi|148266668|ref|YP_001245611.1| purine nucleosidase [Staphylococcus aureus subsp. aureus JH9]
gi|150392708|ref|YP_001315383.1| purine nucleosidase [Staphylococcus aureus subsp. aureus JH1]
gi|156978573|ref|YP_001440832.1| hypothetical protein SAHV_0242 [Staphylococcus aureus subsp. aureus
Mu3]
gi|253315403|ref|ZP_04838616.1| hypothetical protein SauraC_04472 [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|253734802|ref|ZP_04868967.1| ribosylpyrimidine nucleosidase [Staphylococcus aureus subsp. aureus
TCH130]
gi|255005039|ref|ZP_05143640.2| hypothetical protein SauraM_01190 [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|257793945|ref|ZP_05642924.1| purine nucleosidase [Staphylococcus aureus A9781]
gi|258408648|ref|ZP_05680933.1| purine nucleosidase [Staphylococcus aureus A9763]
gi|258421240|ref|ZP_05684167.1| purine nucleosidase [Staphylococcus aureus A9719]
gi|258438988|ref|ZP_05690079.1| purine nucleosidase [Staphylococcus aureus A9299]
gi|258444223|ref|ZP_05692557.1| purine nucleosidase [Staphylococcus aureus A8115]
gi|258447103|ref|ZP_05695253.1| purine nucleosidase [Staphylococcus aureus A6300]
gi|258448562|ref|ZP_05696675.1| purine nucleosidase [Staphylococcus aureus A6224]
gi|258455797|ref|ZP_05703752.1| purine nucleosidase [Staphylococcus aureus A5937]
gi|269201891|ref|YP_003281160.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus ED98]
gi|282893399|ref|ZP_06301632.1| purine nucleosidase [Staphylococcus aureus A8117]
gi|282926351|ref|ZP_06333983.1| purine nucleosidase [Staphylococcus aureus A10102]
gi|295405513|ref|ZP_06815323.1| purine nucleosidase [Staphylococcus aureus A8819]
gi|296276794|ref|ZP_06859301.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus MR1]
gi|297244850|ref|ZP_06928730.1| purine nucleosidase [Staphylococcus aureus A8796]
gi|384863598|ref|YP_005748957.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus aureus subsp. aureus ECT-R 2]
gi|387149428|ref|YP_005740992.1| Inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus 04-02981]
gi|415692291|ref|ZP_11454297.1| hypothetical protein CGSSa03_05109 [Staphylococcus aureus subsp.
aureus CGS03]
gi|417651805|ref|ZP_12301561.1| cytidine/uridine-specific hydrolase [Staphylococcus aureus subsp.
aureus 21172]
gi|417803214|ref|ZP_12450260.1| cytidine/uridine-specific hydrolase [Staphylococcus aureus subsp.
aureus 21318]
gi|417894128|ref|ZP_12538151.1| cytidine/uridine-specific hydrolase [Staphylococcus aureus subsp.
aureus 21201]
gi|417898288|ref|ZP_12542210.1| cytidine/uridine-specific hydrolase [Staphylococcus aureus subsp.
aureus 21259]
gi|418423420|ref|ZP_12996578.1| hypothetical protein MQA_02168 [Staphylococcus aureus subsp. aureus
VRS1]
gi|418426375|ref|ZP_12999410.1| hypothetical protein MQC_01017 [Staphylococcus aureus subsp. aureus
VRS2]
gi|418429306|ref|ZP_13002244.1| hypothetical protein MQE_00577 [Staphylococcus aureus subsp. aureus
VRS3a]
gi|418432201|ref|ZP_13005007.1| hypothetical protein MQG_01606 [Staphylococcus aureus subsp. aureus
VRS4]
gi|418435914|ref|ZP_13007737.1| purine nucleosidase [Staphylococcus aureus subsp. aureus VRS5]
gi|418438810|ref|ZP_13010536.1| purine nucleosidase [Staphylococcus aureus subsp. aureus VRS6]
gi|418441794|ref|ZP_13013417.1| hypothetical protein MQM_01891 [Staphylococcus aureus subsp. aureus
VRS7]
gi|418444914|ref|ZP_13016411.1| purine nucleosidase [Staphylococcus aureus subsp. aureus VRS8]
gi|418447860|ref|ZP_13019272.1| purine nucleosidase [Staphylococcus aureus subsp. aureus VRS9]
gi|418450690|ref|ZP_13022036.1| purine nucleosidase [Staphylococcus aureus subsp. aureus VRS10]
gi|418453703|ref|ZP_13024982.1| purine nucleosidase [Staphylococcus aureus subsp. aureus VRS11a]
gi|418456612|ref|ZP_13027830.1| purine nucleosidase [Staphylococcus aureus subsp. aureus VRS11b]
gi|418567416|ref|ZP_13131780.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus 21272]
gi|418638974|ref|ZP_13201244.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus IS-3]
gi|418652477|ref|ZP_13214444.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus IS-99]
gi|418879953|ref|ZP_13434175.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIG1213]
gi|418882899|ref|ZP_13437101.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIG1769]
gi|418885527|ref|ZP_13439682.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIG1150]
gi|418913495|ref|ZP_13467469.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIGC340D]
gi|418919020|ref|ZP_13472968.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIGC348]
gi|418930427|ref|ZP_13484277.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIG1750]
gi|418990157|ref|ZP_13537820.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIG1096]
gi|419784143|ref|ZP_14309918.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus IS-M]
gi|424772830|ref|ZP_18199918.1| putative cytidine/uridine-specific hydrolase [Staphylococcus aureus
subsp. aureus CM05]
gi|443635547|ref|ZP_21119676.1| putative cytidine/uridine-specific hydrolase [Staphylococcus aureus
subsp. aureus 21236]
gi|13700158|dbj|BAB41457.1| SA0234 [Staphylococcus aureus subsp. aureus N315]
gi|14246010|dbj|BAB56405.1| similar to inosine-uridine preferring nucleoside hydrolase
[Staphylococcus aureus subsp. aureus Mu50]
gi|147739737|gb|ABQ48035.1| Purine nucleosidase [Staphylococcus aureus subsp. aureus JH9]
gi|149945160|gb|ABR51096.1| Purine nucleosidase [Staphylococcus aureus subsp. aureus JH1]
gi|156720708|dbj|BAF77125.1| hypothetical protein SAHV_0242 [Staphylococcus aureus subsp. aureus
Mu3]
gi|253727281|gb|EES96010.1| ribosylpyrimidine nucleosidase [Staphylococcus aureus subsp. aureus
TCH130]
gi|257787917|gb|EEV26257.1| purine nucleosidase [Staphylococcus aureus A9781]
gi|257840657|gb|EEV65116.1| purine nucleosidase [Staphylococcus aureus A9763]
gi|257842664|gb|EEV67086.1| purine nucleosidase [Staphylococcus aureus A9719]
gi|257847864|gb|EEV71860.1| purine nucleosidase [Staphylococcus aureus A9299]
gi|257850482|gb|EEV74430.1| purine nucleosidase [Staphylococcus aureus A8115]
gi|257854116|gb|EEV77069.1| purine nucleosidase [Staphylococcus aureus A6300]
gi|257858193|gb|EEV81081.1| purine nucleosidase [Staphylococcus aureus A6224]
gi|257862009|gb|EEV84782.1| purine nucleosidase [Staphylococcus aureus A5937]
gi|262074181|gb|ACY10154.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus ED98]
gi|282591680|gb|EFB96751.1| purine nucleosidase [Staphylococcus aureus A10102]
gi|282764085|gb|EFC04212.1| purine nucleosidase [Staphylococcus aureus A8117]
gi|285815967|gb|ADC36454.1| Inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus 04-02981]
gi|294969588|gb|EFG45607.1| purine nucleosidase [Staphylococcus aureus A8819]
gi|297178367|gb|EFH37614.1| purine nucleosidase [Staphylococcus aureus A8796]
gi|312828765|emb|CBX33607.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315130220|gb|EFT86208.1| hypothetical protein CGSSa03_05109 [Staphylococcus aureus subsp.
aureus CGS03]
gi|329725635|gb|EGG62114.1| cytidine/uridine-specific hydrolase [Staphylococcus aureus subsp.
aureus 21172]
gi|334273432|gb|EGL91782.1| cytidine/uridine-specific hydrolase [Staphylococcus aureus subsp.
aureus 21318]
gi|341848873|gb|EGS90030.1| cytidine/uridine-specific hydrolase [Staphylococcus aureus subsp.
aureus 21259]
gi|341853635|gb|EGS94516.1| cytidine/uridine-specific hydrolase [Staphylococcus aureus subsp.
aureus 21201]
gi|371982061|gb|EHO99221.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus 21272]
gi|375019600|gb|EHS13152.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus IS-3]
gi|375021832|gb|EHS15327.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus IS-99]
gi|377717125|gb|EHT41302.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIG1769]
gi|377717441|gb|EHT41617.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIG1750]
gi|377724157|gb|EHT48274.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIG1096]
gi|377728600|gb|EHT52700.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIG1150]
gi|377733711|gb|EHT57752.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIG1213]
gi|377759538|gb|EHT83419.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIGC340D]
gi|377768072|gb|EHT91857.1| pyrimidine-specific ribonucleoside hydrolase rihA [Staphylococcus
aureus subsp. aureus CIGC348]
gi|383364347|gb|EID41661.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus IS-M]
gi|387721772|gb|EIK09630.1| hypothetical protein MQE_00577 [Staphylococcus aureus subsp. aureus
VRS3a]
gi|387722025|gb|EIK09868.1| hypothetical protein MQC_01017 [Staphylococcus aureus subsp. aureus
VRS2]
gi|387723178|gb|EIK10926.1| hypothetical protein MQA_02168 [Staphylococcus aureus subsp. aureus
VRS1]
gi|387728338|gb|EIK15827.1| hypothetical protein MQG_01606 [Staphylococcus aureus subsp. aureus
VRS4]
gi|387729996|gb|EIK17407.1| purine nucleosidase [Staphylococcus aureus subsp. aureus VRS5]
gi|387731964|gb|EIK19214.1| purine nucleosidase [Staphylococcus aureus subsp. aureus VRS6]
gi|387739013|gb|EIK26026.1| purine nucleosidase [Staphylococcus aureus subsp. aureus VRS8]
gi|387740164|gb|EIK27126.1| purine nucleosidase [Staphylococcus aureus subsp. aureus VRS9]
gi|387740438|gb|EIK27387.1| hypothetical protein MQM_01891 [Staphylococcus aureus subsp. aureus
VRS7]
gi|387747888|gb|EIK34588.1| purine nucleosidase [Staphylococcus aureus subsp. aureus VRS10]
gi|387748917|gb|EIK35576.1| purine nucleosidase [Staphylococcus aureus subsp. aureus VRS11a]
gi|387749439|gb|EIK36063.1| purine nucleosidase [Staphylococcus aureus subsp. aureus VRS11b]
gi|402347418|gb|EJU82456.1| putative cytidine/uridine-specific hydrolase [Staphylococcus aureus
subsp. aureus CM05]
gi|408422756|emb|CCJ10167.1| Similar to inosine-uridine preferring nucleoside hydrolase
[Staphylococcus aureus subsp. aureus ST228]
gi|408424744|emb|CCJ12131.1| Similar to inosine-uridine preferring nucleoside hydrolase
[Staphylococcus aureus subsp. aureus ST228]
gi|408426733|emb|CCJ14096.1| Similar to inosine-uridine preferring nucleoside hydrolase
[Staphylococcus aureus subsp. aureus ST228]
gi|408428721|emb|CCJ25886.1| Similar to inosine-uridine preferring nucleoside hydrolase
[Staphylococcus aureus subsp. aureus ST228]
gi|408430709|emb|CCJ18024.1| Similar to inosine-uridine preferring nucleoside hydrolase
[Staphylococcus aureus subsp. aureus ST228]
gi|408432703|emb|CCJ19988.1| Similar to inosine-uridine preferring nucleoside hydrolase
[Staphylococcus aureus subsp. aureus ST228]
gi|408434692|emb|CCJ21952.1| Similar to inosine-uridine preferring nucleoside hydrolase
[Staphylococcus aureus subsp. aureus ST228]
gi|408436677|emb|CCJ23920.1| Similar to inosine-uridine preferring nucleoside hydrolase
[Staphylococcus aureus subsp. aureus ST228]
gi|443409564|gb|ELS68059.1| putative cytidine/uridine-specific hydrolase [Staphylococcus aureus
subsp. aureus 21236]
Length = 311
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 75/173 (43%), Gaps = 34/173 (19%)
Query: 78 PLRQPTA---QQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAI 132
P RQ A V+IN + S P+T+ G TN A L+ P + ++IE I +MGG
Sbjct: 97 PSRQAVAMPASDVIINKVMTSDTPVTIVATGPLTNVATALIREPRIAEHIESITLMGGG- 155
Query: 133 RSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
+ GN P AEFNI+ D AA V SGI + + LD T
Sbjct: 156 -----------------TFGNW-----TPTAEFNIWVDAEAAKRVFESGITINVFGLDVT 193
Query: 193 KTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWS-----GSPPFHEAYCM 240
+ +++N +E N AQ+ + L+ + T+ P H+A +
Sbjct: 194 HQV-LADNHVIERFESINNPVAQFVVELLQFFKKTYKTHFNMDGGPIHDACTI 245
Score = 46.6 bits (109), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 114/283 (40%), Gaps = 55/283 (19%)
Query: 405 MGKPVVFDIDMSAGDFLALIYL--LKLPVELINLKGILVSSTGWATSATVDVVYDLLHMM 462
M + ++ D D D +ALI + P+E++ + + + + ++L +M
Sbjct: 1 MKRKIIMDCDPGHDDAIALILAGAIDSPLEILAVTTV---AGNQSVDKNTTNALNVLDIM 57
Query: 463 GRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRR 522
GR DI V G P I +A I SG LD LP +P R
Sbjct: 58 GRQDIAVAKG---------ADRPLIKPAAFASEIHGESG--LD-------GPKLPSTPSR 99
Query: 523 YTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQ-IIGL 581
+ P + + ++ S P +TI+ GPLTN+A +I
Sbjct: 100 QA-----------------VAMPASDVIINKVMTSDTP---VTIVATGPLTNVATALIRE 139
Query: 582 QNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
+ I+ + ++GG GN + AEFN+++D AAK VFES + I +
Sbjct: 140 PRIAEHIESITLMGGGTF-----GN-----WTPTAEFNIWVDAEAAKRVFESGITINVFG 189
Query: 642 LHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSH 684
L + +V + ++ + + P + F LLQ ++H
Sbjct: 190 LDVTHQVLADNHVIERF-ESINNPVAQFVVELLQFFKKTYKTH 231
>gi|448743712|ref|ZP_21725619.1| cytidine/uridine-specific hydrolase [Staphylococcus aureus KT/Y21]
gi|445562997|gb|ELY19161.1| cytidine/uridine-specific hydrolase [Staphylococcus aureus KT/Y21]
Length = 311
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 75/173 (43%), Gaps = 34/173 (19%)
Query: 78 PLRQPTA---QQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAI 132
P RQ A V+IN + S P+T+ G TN A L+ P + ++IE I +MGG
Sbjct: 97 PSRQAVAMPASDVIINKVMTSDTPVTIVATGPLTNVATALIREPRIAEHIESITLMGGG- 155
Query: 133 RSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
+ GN P AEFNI+ D AA V SGI + + LD T
Sbjct: 156 -----------------TFGNW-----TPTAEFNIWVDAEAAKRVFESGITINVFGLDVT 193
Query: 193 KTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWS-----GSPPFHEAYCM 240
+ +++N +E N AQ+ + L+ + T+ P H+A +
Sbjct: 194 HQV-LADNHVIERFESINNPVAQFVVELLQFFKKTYKTHFNMDGGPIHDACTI 245
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 114/283 (40%), Gaps = 55/283 (19%)
Query: 405 MGKPVVFDIDMSAGDFLALIYL--LKLPVELINLKGILVSSTGWATSATVDVVYDLLHMM 462
M + ++ D D D +ALI + P+E++ + + + + ++L +M
Sbjct: 1 MKRKIIMDCDPGHDDAIALILAGAIDSPLEILAVTTV---AGNQSVDKNTTNALNVLDIM 57
Query: 463 GRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRR 522
GR DI V G P I +A I SG LD LP +P R
Sbjct: 58 GRQDIAVAKG---------ADRPLIKPAAFASEIHGESG--LD-------GPKLPSTPSR 99
Query: 523 YTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQ-IIGL 581
+ P + + ++ S P +TI+ GPLTN+A +I
Sbjct: 100 QA-----------------VAMPASDVIINKVMTSDTP---VTIVATGPLTNVATALIRE 139
Query: 582 QNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
+ I+ + ++GG GN + AEFN+++D AAK VFES + I +
Sbjct: 140 PRIAEHIESITLMGGGTF-----GN-----WTPTAEFNIWVDAEAAKRVFESGITINVFG 189
Query: 642 LHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSH 684
L + +V + ++ + + P + F LLQ ++H
Sbjct: 190 LDVTHQVLADNHVIERF-ESINNPVAQFVVELLQFFKKTYKTH 231
>gi|377573994|ref|ZP_09803030.1| pyrimidine-specific ribonucleoside hydrolase RihB [Mobilicoccus
pelagius NBRC 104925]
gi|377537285|dbj|GAB48195.1| pyrimidine-specific ribonucleoside hydrolase RihB [Mobilicoccus
pelagius NBRC 104925]
Length = 343
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 31/161 (19%)
Query: 84 AQQVLINAI---SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNST 140
A +V+++ + G +T+ +G TN A+ + P + + + + +MGGAIR
Sbjct: 103 AVEVIVDTVMCEEPGTVTLVPVGPLTNIALAVRREPRIVERVAEVVLMGGAIR------- 155
Query: 141 NSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSEN 200
+GN +P AEFNI DP AA V +G VT++ LD T +E
Sbjct: 156 ----------VGN-----QSPVAEFNIACDPEAAQIVFSAGWRVTMVGLDLTHQAQATEE 200
Query: 201 FFVEFERRQNTYEAQYCFQSLKMIRDTWSGS-----PPFHE 236
F A L RD++ S PP H+
Sbjct: 201 VFARIAEVGGPV-ADLTLGMLSFYRDSYRSSGRLDHPPLHD 240
Score = 43.5 bits (101), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 541 ELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQ---DVYIVGGN 597
EL AV+V V EPG+ +T++ GPLTN+A + ++ +++ +V ++GG
Sbjct: 97 ELDTRHAVEVIVDTVMCEEPGT-VTLVPVGPLTNIA--LAVRREPRIVERVAEVVLMGGA 153
Query: 598 KGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHK 657
N+ S AEFN+ DP AA+ VF + + ++ L + + + ++ +
Sbjct: 154 IRVGNQ---------SPVAEFNIACDPEAAQIVFSAGWRVTMVGLDLTHQAQATEEVFAR 204
Query: 658 LRD 660
+ +
Sbjct: 205 IAE 207
>gi|384567033|ref|ZP_10014137.1| Inosine-uridine nucleoside N-ribohydrolase [Saccharomonospora
glauca K62]
gi|384522887|gb|EIF00083.1| Inosine-uridine nucleoside N-ribohydrolase [Saccharomonospora
glauca K62]
Length = 320
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 65/152 (42%), Gaps = 26/152 (17%)
Query: 54 QRLYVNTNYGL--RKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIF 111
Q YV+ GL R A LP+ R P L+ A S P+T+ +G TN A
Sbjct: 78 QARYVHGTDGLSGRSAALPEAERPVEPGGAVWLLSRLLEA-SDEPVTIAPIGPLTNIATL 136
Query: 112 LMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDP 171
L P L I I VMGGA+ N+S + AEFNI+SDP
Sbjct: 137 LSARPDLHHKIARIVVMGGAL-----GHGNASAA-----------------AEFNIWSDP 174
Query: 172 FAAYTVLHSG-IPVTIIPLDATKTIPVSENFF 202
AA VL G +P ++P+D T V +
Sbjct: 175 EAAQRVLGGGEVPCVLVPMDLTYRCAVDREWL 206
>gi|188535481|ref|YP_001909278.1| inosine/uridine-preferring nucleoside hydrolase [Erwinia
tasmaniensis Et1/99]
gi|188030523|emb|CAO98418.1| Inosine/uridine-preferring nucleoside hydrolase [Erwinia
tasmaniensis Et1/99]
Length = 306
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 20/115 (17%)
Query: 88 LINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQS 145
+IN++ P +T+ G TN A+ + P + I+ + +MGGA F +
Sbjct: 103 IINSVRHSPDALTLVAAGPLTNIALAINQAPDIVPQIKQLVMMGGA-----FGTQGRG-- 155
Query: 146 EQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSEN 200
GN+ PYAE+N++ DP AA VL SG+PV +IPLD T + VS++
Sbjct: 156 ------GNI-----TPYAEWNMWRDPHAADQVLQSGLPVVMIPLDVTLEVLVSDD 199
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 8/87 (9%)
Query: 564 ITILTNGPLTNLAQIIGLQNSSSV--IQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMF 621
+T++ GPLTN+A I Q V I+ + ++GG G GN+ + YAE+NM+
Sbjct: 114 LTLVAAGPLTNIALAIN-QAPDIVPQIKQLVMMGGAFGTQGRGGNI-----TPYAEWNMW 167
Query: 622 LDPLAAKAVFESKLEIKLIPLHMQRRV 648
DP AA V +S L + +IPL + V
Sbjct: 168 RDPHAADQVLQSGLPVVMIPLDVTLEV 194
>gi|400603145|gb|EJP70743.1| inosine-uridine preferring nucleoside hydrolase [Beauveria bassiana
ARSEF 2860]
Length = 386
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 67 AFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIY 126
A LP +P+ A V + A G + GS TN L +P L +I+ +
Sbjct: 95 ALLPVPDVAPSPVPAIDAMAVALRAQPPGTAWLVATGSLTNVGALLRAHPDLAAHIKGLS 154
Query: 127 VMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPV-- 184
+MGGA+ D F++ + + + IGN+ P+AEFNI DP AA V G PV
Sbjct: 155 IMGGAL-GDGFSAATLGKVDGRERIGNV-----TPWAEFNIVIDPEAAAEVF--GNPVLA 206
Query: 185 ---TIIPLDATKTIPVS 198
T++PLD + +P +
Sbjct: 207 RKTTVVPLDLSHQVPAT 223
>gi|423195931|ref|ZP_17182514.1| pyrimidine-specific ribonucleoside hydrolase rihA [Aeromonas
hydrophila SSU]
gi|404632732|gb|EKB29334.1| pyrimidine-specific ribonucleoside hydrolase rihA [Aeromonas
hydrophila SSU]
Length = 311
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 76/178 (42%), Gaps = 35/178 (19%)
Query: 51 PVGQRLYVNTNY----GLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGS 104
P+ + L + N GL LP +AP+ TA +++ + S P+T+ G
Sbjct: 70 PLARELIIADNVHGESGLDGPKLPD--PAFAPVAM-TALELMAKCLRESPEPVTLVPTGP 126
Query: 105 HTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAE 164
TN A+ L +P LK I I +MGGA + GN P AE
Sbjct: 127 LTNIALLLAAHPELKSKIARIVLMGGAAGA-----------------GNW-----TPAAE 164
Query: 165 FNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFER-RQNTYEAQYCFQSL 221
FNI+ DP AA V SG+P+T+ LD T V + + ER R T C L
Sbjct: 165 FNIYVDPEAADMVFKSGLPITMCGLDVTHQAQVMDE---DIERVRAITNPVAQCVAGL 219
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 109/261 (41%), Gaps = 61/261 (23%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M PV+ D D D +ALI L P + + + S+ T++ +L ++GR
Sbjct: 1 MALPVILDCDPGHDDAIALILALASPE--LKVLAVTTSAGNQTPDKTLNNALRILTLLGR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DDIPV G PK PL + +D ++G + D P+ P
Sbjct: 59 DDIPVATG--------APK-------------PLARE-LIIADNVHGESGLDGPKLP--- 93
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVW----KSIVESIEPGSKITILTNGPLTNLAQII 579
DP P+A+ K + ES EP +T++ GPLTN+A ++
Sbjct: 94 ---------------DPAF-APVAMTALELMAKCLRESPEP---VTLVPTGPLTNIALLL 134
Query: 580 GLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIK 638
S I + ++GG G N + AEFN+++DP AA VF+S L I
Sbjct: 135 AAHPELKSKIARIVLMGGAAGAGNW---------TPAAEFNIYVDPEAADMVFKSGLPIT 185
Query: 639 LIPLHMQRRVASFFKILHKLR 659
+ L + + + + ++R
Sbjct: 186 MCGLDVTHQAQVMDEDIERVR 206
>gi|402812881|ref|ZP_10862476.1| inosine-uridine nucleoside N-ribohydrolase [Paenibacillus alvei DSM
29]
gi|402508824|gb|EJW19344.1| inosine-uridine nucleoside N-ribohydrolase [Paenibacillus alvei DSM
29]
Length = 349
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 78/182 (42%), Gaps = 30/182 (16%)
Query: 68 FLPQGGRKYAPLRQPTAQQVLINAISA--GPITVFVMGSHTNFAIFLMNNPHLKKNIEHI 125
L + G+ P+ A + +I+ + A G T+ G T+ A L +P +++ +E +
Sbjct: 122 LLNESGKVVTPVADKPAHEHIIDTLRATEGKTTLLFTGPLTDLARALDMDPTIEEKVERL 181
Query: 126 YVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVT 185
MGG R GN++ + + AE+N+F DP AA V SGI +
Sbjct: 182 VWMGGTFRE----------------AGNVHEPEHDGTAEWNVFWDPDAAARVWESGIEID 225
Query: 186 IIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPF-----HEAYCM 240
++ L++T +P++ + + + + Q M+ PP + Y +
Sbjct: 226 LVALESTNQVPLTLDVRERWAAERKHIGVDFLGQCYAMV-------PPLVHFSTNSTYYL 278
Query: 241 WD 242
WD
Sbjct: 279 WD 280
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Query: 563 KITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFL 622
K T+L GPLT+LA+ L ++ + V + G E GNV AE+N+F
Sbjct: 152 KTTLLFTGPLTDLAR--ALDMDPTIEEKVERLVWMGGTFREAGNVHEPEHDGTAEWNVFW 209
Query: 623 DPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKK 663
DP AA V+ES +EI L+ L +V + + +K
Sbjct: 210 DPDAAARVWESGIEIDLVALESTNQVPLTLDVRERWAAERK 250
>gi|386841379|ref|YP_006246437.1| nucleoside hydrolase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374101680|gb|AEY90564.1| nucleoside hydrolase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451794674|gb|AGF64723.1| nucleoside hydrolase [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 320
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 31/121 (25%)
Query: 79 LRQPTAQQVLINAI---------SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMG 129
L PT V ++A+ S P+T+ TN A+ L +P + +NIE I MG
Sbjct: 94 LPAPTRTPVAVDAVTLLRREILASPRPVTLIPTAPLTNIALLLRTHPEVTRNIERIVFMG 153
Query: 130 GAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPL 189
GA+ + GN + P AEFN++ DP AA +L +G+P+T+ L
Sbjct: 154 GAV-----------------ATGN-----ATPVAEFNVWHDPEAAAILLTAGVPITMYGL 191
Query: 190 D 190
D
Sbjct: 192 D 192
>gi|224825373|ref|ZP_03698478.1| Inosine/uridine-preferring nucleoside hydrolase [Pseudogulbenkiania
ferrooxidans 2002]
gi|224602294|gb|EEG08472.1| Inosine/uridine-preferring nucleoside hydrolase [Pseudogulbenkiania
ferrooxidans 2002]
Length = 314
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 60/136 (44%), Gaps = 24/136 (17%)
Query: 78 PLRQPTAQQVLINAI---SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
PL+ A +++ + + G IT+ +G TN A+ L P + I+ I +MGG+
Sbjct: 100 PLQDKHAVDFIVDTLREATPGTITLCPVGPLTNIALALAKAPDIAPRIKEIVLMGGSY-- 157
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKT 194
F N S P AEFNIF DP AA VL SG+P+ ++PLD T
Sbjct: 158 --FAGGNIS-----------------PAAEFNIFVDPEAAAIVLRSGVPIVMLPLDVTHQ 198
Query: 195 IPVSENFFVEFERRQN 210
+ S N
Sbjct: 199 VGASSARIARLHALAN 214
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 65/121 (53%), Gaps = 17/121 (14%)
Query: 547 AVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSV---IQDVYIVGGNKGQDNE 603
AVD + PG+ IT+ GPLTN+A + L + + I+++ ++GG+
Sbjct: 106 AVDFIVDTLREATPGT-ITLCPVGPLTNIA--LALAKAPDIAPRIKEIVLMGGSY---FA 159
Query: 604 KGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV-ASFFKI--LHKLRD 660
GN+ S AEFN+F+DP AA V S + I ++PL + +V AS +I LH L +
Sbjct: 160 GGNI-----SPAAEFNIFVDPEAAAIVLRSGVPIVMLPLDVTHQVGASSARIARLHALAN 214
Query: 661 R 661
R
Sbjct: 215 R 215
>gi|443313987|ref|ZP_21043589.1| Inosine-uridine nucleoside N-ribohydrolase [Leptolyngbya sp. PCC
6406]
gi|442786421|gb|ELR96159.1| Inosine-uridine nucleoside N-ribohydrolase [Leptolyngbya sp. PCC
6406]
Length = 308
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 111/272 (40%), Gaps = 62/272 (22%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
V+ D D D +AL ++ L ++LK I + + T L +MGR+D+P
Sbjct: 4 VIIDCDPGVDDAIAL--MVALSSTALDLKAITTVAGNVPLALTQANARKLCTLMGREDVP 61
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V YA G R L RSP TAE
Sbjct: 62 V----------------------YA-----------------GCPRPLVRSP--ITAEAI 80
Query: 529 VRFGASQDNDDPELRQPLAVD-----VWKSIVESIEPGSKITILTNGPLTNLAQ-IIGLQ 582
+ PE PL + ++ +S P IT+ T GPLTNLA ++
Sbjct: 81 HGITGLEGATLPEPTVPLQAQHGVAYLMDALTQSPRP---ITLATLGPLTNLAAAVVQCP 137
Query: 583 NSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+ + + +V ++GG Q GNV V AEFN++ DP AA+ VFE+ + I LI L
Sbjct: 138 DILTHVTEVVMMGGGIAQ----GNVTPV-----AEFNLYADPHAARVVFEAGVPITLISL 188
Query: 643 HMQRRVASFFKILHKLRDRKKTPESVFSQRLL 674
+ +V + L ++R P S + LL
Sbjct: 189 DVTHQVLTTPDRLARIRALGN-PVSTIAADLL 219
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 27/150 (18%)
Query: 63 GLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKK 120
GL A LP+ PL+ L++A+ S PIT+ +G TN A ++ P +
Sbjct: 85 GLEGATLPE---PTVPLQAQHGVAYLMDALTQSPRPITLATLGPLTNLAAAVVQCPDILT 141
Query: 121 NIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHS 180
++ + +MGG I GN+ P AEFN+++DP AA V +
Sbjct: 142 HVTEVVMMGGGIAQ-----------------GNV-----TPVAEFNLYADPHAARVVFEA 179
Query: 181 GIPVTIIPLDATKTIPVSENFFVEFERRQN 210
G+P+T+I LD T + + + N
Sbjct: 180 GVPITLISLDVTHQVLTTPDRLARIRALGN 209
>gi|365969525|ref|YP_004951086.1| pyrimidine-specific ribonucleoside hydrolase rihA [Enterobacter
cloacae EcWSU1]
gi|365748438|gb|AEW72665.1| Pyrimidine-specific ribonucleoside hydrolase rihA [Enterobacter
cloacae EcWSU1]
Length = 321
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 63/137 (45%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ G + P TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 88 VHGESGLDGPALPEPGFEAQPC---TAVELMAKVLRESAEPVTLVATGPQTNVALLLNSH 144
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNIF DP AA
Sbjct: 145 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIFVDPEAAE 182
Query: 176 TVLHSGIPVTIIPLDAT 192
V S +P+ + LD T
Sbjct: 183 IVFLSDLPIVMAGLDVT 199
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 101/252 (40%), Gaps = 67/252 (26%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M +P++ D D D +AL+ L P +++K + S+ T+ +L ++ R
Sbjct: 8 MAQPILLDCDPGHDDAIALVLALASPE--LDVKAVTSSAGNQTPEKTLRNFLRMLTLLKR 65
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV A G V P L RDL
Sbjct: 66 TDIPV------AGGAVKP-----------------------------LMRDL------II 84
Query: 525 AENSVRFGASQDNDDPELRQP-------LAVDVWKSIV-ESIEPGSKITILTNGPLTNLA 576
A+N D P L +P AV++ ++ ES EP +T++ GP TN+A
Sbjct: 85 ADN---VHGESGLDGPALPEPGFEAQPCTAVELMAKVLRESAEP---VTLVATGPQTNVA 138
Query: 577 QIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ S I + I+GG G N + AEFN+F+DP AA+ VF S L
Sbjct: 139 LLLNSHPELHSKIARIVIMGGAMGLGN---------WTPAAEFNIFVDPEAAEIVFLSDL 189
Query: 636 EIKLIPLHMQRR 647
I + L + R
Sbjct: 190 PIVMAGLDVTHR 201
>gi|420206602|ref|ZP_14712111.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus
epidermidis NIHLM008]
gi|394277547|gb|EJE21869.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus
epidermidis NIHLM008]
Length = 267
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 37/186 (19%)
Query: 85 QQVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQ 144
+ +L+N + P+T+ +G TN AI L + P ++ I+ I +MGG+
Sbjct: 74 RNLLVN--TQEPLTLIAIGPLTNIAILLTSYPEVQPFIKEIVLMGGSTGR---------- 121
Query: 145 SEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVE 204
GN+ P AEFNI+ DP AA V +SG+P+T+I LD + + +F +
Sbjct: 122 -------GNV-----TPLAEFNIYCDPEAAQIVFNSGLPLTMIGLDLAREALFTHHFVKD 169
Query: 205 FERRQNTYEAQY-CFQSLKMIRDTWSGSPPFHEAYCMWDSFMAGVALSIMLNSSSHNGEN 263
F+ T Y FQ K S F + ++D F + +L+ + N +
Sbjct: 170 FKDTNATSNMLYNLFQHYK--------SEDFEIGFKLYDVF----TILYLLDPEAFNVKE 217
Query: 264 ACSEME 269
A +++E
Sbjct: 218 AYTQIE 223
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 15/138 (10%)
Query: 535 QDNDDPELRQPLAVDVWKSI-VESIEPGSKITILTNGPLTNLAQII-GLQNSSSVIQDVY 592
Q N D +L AV+ +++ V + EP +T++ GPLTN+A ++ I+++
Sbjct: 58 QINQD-DLTSIHAVEAMRNLLVNTQEP---LTLIAIGPLTNIAILLTSYPEVQPFIKEIV 113
Query: 593 IVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFF 652
++GG+ G +GNV + AEFN++ DP AA+ VF S L + +I L + R
Sbjct: 114 LMGGSTG----RGNV-----TPLAEFNIYCDPEAAQIVFNSGLPLTMIGLDLAREALFTH 164
Query: 653 KILHKLRDRKKTPESVFS 670
+ +D T +++
Sbjct: 165 HFVKDFKDTNATSNMLYN 182
>gi|283782067|ref|YP_003372822.1| inosine/uridine-preferring nucleoside hydrolase [Pirellula staleyi
DSM 6068]
gi|283440520|gb|ADB18962.1| Inosine/uridine-preferring nucleoside hydrolase [Pirellula staleyi
DSM 6068]
Length = 313
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 62/118 (52%), Gaps = 23/118 (19%)
Query: 80 RQPTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCF 137
RQ +++++ + + A P +++ +G TN A L +P L + I + ++GG++++
Sbjct: 99 RQHPSEKLICDEVRAAPGEVSILCLGPLTNVARALSRDPGLSEMIGRLIILGGSVKA--- 155
Query: 138 NSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTI 195
+GN+ P AEFNI++DP +A V S + T+IPLD T+ +
Sbjct: 156 -------------VGNV-----TPCAEFNIYADPASARAVFRSPVTKTLIPLDCTEQV 195
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 29/178 (16%)
Query: 560 PGSKITILTNGPLTNLAQIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEF 618
PG +++IL GPLTN+A+ + S +I + I+GG+ GNV + AEF
Sbjct: 115 PG-EVSILCLGPLTNVARALSRDPGLSEMIGRLIILGGSV---KAVGNV-----TPCAEF 165
Query: 619 NMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLM 678
N++ DP +A+AVF S + LIPL +V +L +L PE + +LL+ L
Sbjct: 166 NIYADPASARAVFRSPVTKTLIPLDCTEQVTFTLDLLEQL-----PPEHSRAGQLLRKL- 219
Query: 679 TLQQSHHSYHH----VDTFLGEVLGAVILGGNPHLNQTYKIKSLEIISDGDISKVGQI 732
L + SY FL + L AV+ +P L T + GD+ +G++
Sbjct: 220 -LPYAFRSYRREMGLESIFLHDAL-AVVAAVHPELFPTVDMA-------GDVETIGEL 268
>gi|336054556|ref|YP_004562843.1| nucleoside hydrolase [Lactobacillus kefiranofaciens ZW3]
gi|333957933|gb|AEG40741.1| Nucleoside hydrolase [Lactobacillus kefiranofaciens ZW3]
Length = 308
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 24/109 (22%)
Query: 84 AQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTN 141
A ++ N I P +T+ +G T+FA+ L P +K+NIE I +MGG
Sbjct: 105 AATLMANEIENSPAKVTLLGIGPLTDFALLLKQYPAVKQNIEQIVIMGG----------- 153
Query: 142 SSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLD 190
N+ + +P AE+NI DP AA V HSG+P+ + PL+
Sbjct: 154 -----------NIGRGNHSPLAEYNIAGDPEAAQVVFHSGLPIKVAPLE 191
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 65/121 (53%), Gaps = 19/121 (15%)
Query: 531 FGASQDNDDPELRQP-LAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSV-- 587
F Q NDD L +P LA + + +E+ +K+T+L GPLT+ A + L+ +V
Sbjct: 90 FDFEQANDD--LVKPGLAATLMANEIEN--SPAKVTLLGIGPLTDFALL--LKQYPAVKQ 143
Query: 588 -IQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQR 646
I+ + I+GGN G+ N S AE+N+ DP AA+ VF S L IK+ PL +
Sbjct: 144 NIEQIVIMGGNIGRGNH---------SPLAEYNIAGDPEAAQVVFHSGLPIKVAPLEIGN 194
Query: 647 R 647
+
Sbjct: 195 K 195
>gi|317049997|ref|YP_004117645.1| inosine/uridine-preferring nucleoside hydrolase [Pantoea sp. At-9b]
gi|316951614|gb|ADU71089.1| Inosine/uridine-preferring nucleoside hydrolase [Pantoea sp. At-9b]
Length = 305
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 63/123 (51%), Gaps = 20/123 (16%)
Query: 80 RQPTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCF 137
+ P A Q +I+++ A P IT+ +G TN A + P + ++ + +MGGA +D
Sbjct: 94 QAPGAVQFIIDSVRAHPHAITLVAIGPLTNIASAINQAPDIIPLVKELVMMGGAFGTDGH 153
Query: 138 NSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPV 197
+ GN+ P+AEFNI+ DP AA VL S + V ++PLD T + +
Sbjct: 154 S-------------GNV-----TPFAEFNIWKDPHAADQVLSSALKVVVLPLDVTHKVLI 195
Query: 198 SEN 200
+ N
Sbjct: 196 TAN 198
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 77/150 (51%), Gaps = 16/150 (10%)
Query: 504 LDSDTLYGLARDL---PRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEP 560
+D+ G +R L P P R E+ + S + D + P AV + I++S+
Sbjct: 55 IDAPVYRGCSRPLAQAPSEPARLHGEDGLGDAFSNPHSD---QAPGAV---QFIIDSVRA 108
Query: 561 G-SKITILTNGPLTNLAQIIG-LQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEF 618
IT++ GPLTN+A I + +++++ ++GG G D GNV + +AEF
Sbjct: 109 HPHAITLVAIGPLTNIASAINQAPDIIPLVKELVMMGGAFGTDGHSGNV-----TPFAEF 163
Query: 619 NMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
N++ DP AA V S L++ ++PL + +V
Sbjct: 164 NIWKDPHAADQVLSSALKVVVLPLDVTHKV 193
>gi|170684012|ref|YP_001742768.1| ribonucleoside hydrolase 1 [Escherichia coli SMS-3-5]
gi|422827855|ref|ZP_16876028.1| hypothetical protein ESNG_00533 [Escherichia coli B093]
gi|226739277|sp|B1LLA1.1|RIHA_ECOSM RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|170521730|gb|ACB19908.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
SMS-3-5]
gi|371616281|gb|EHO04647.1| hypothetical protein ESNG_00533 [Escherichia coli B093]
Length = 311
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 64/137 (46%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + S P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPE--PTFAP-QNCTAVELMAKTLCESEEPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 107/264 (40%), Gaps = 67/264 (25%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLCMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV A G V P L RDL
Sbjct: 59 TDIPV------ASGAVKP-----------------------------LMRDL------II 77
Query: 525 AENSVRFGASQDNDDPELRQPL-------AVDVW-KSIVESIEPGSKITILTNGPLTNLA 576
A+N D P L +P AV++ K++ ES EP +TI++ GP TN+A
Sbjct: 78 ADN---VHGESGLDGPALPEPTFAPQNCTAVELMAKTLCESEEP---VTIVSTGPQTNVA 131
Query: 577 QIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ S I + I+GG G N + AEFN+++DP AA+ VF+S +
Sbjct: 132 LLLNSHPELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGI 182
Query: 636 EIKLIPLHMQRRVASFFKILHKLR 659
+ + L + + + + R
Sbjct: 183 PVVMAGLDVTHKAQIHVEDTERFR 206
>gi|314933253|ref|ZP_07840618.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
caprae C87]
gi|313653403|gb|EFS17160.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
caprae C87]
Length = 302
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 56/119 (47%), Gaps = 22/119 (18%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
S P+T+ +G TN AI L P + I+ I +MGG+ G
Sbjct: 115 SDDPLTIIAIGPLTNIAILLSTYPEVTDYIKEIVLMGGSTGR-----------------G 157
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNT 211
N+ P AEFNI+ DP AA V +SG+P+T+I LD + S +F F+ + T
Sbjct: 158 NVIP-----LAEFNIYCDPEAAQVVFNSGLPLTMIGLDLAREAMFSHDFVKSFKNQNET 211
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 69/126 (54%), Gaps = 14/126 (11%)
Query: 541 ELRQPLAVDVWK-SIVESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNK 598
+L AV+ K +I++S +P +TI+ GPLTN+A ++ + I+++ ++GG+
Sbjct: 98 DLASTHAVEAMKETILKSDDP---LTIIAIGPLTNIAILLSTYPEVTDYIKEIVLMGGST 154
Query: 599 GQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKL 658
G +GNV + AEFN++ DP AA+ VF S L + +I L + R +
Sbjct: 155 G----RGNVIPL-----AEFNIYCDPEAAQVVFNSGLPLTMIGLDLAREAMFSHDFVKSF 205
Query: 659 RDRKKT 664
+++ +T
Sbjct: 206 KNQNET 211
>gi|384549134|ref|YP_005738386.1| inosine/uridine-preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus JKD6159]
gi|302331983|gb|ADL22176.1| inosine/uridine-preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus JKD6159]
Length = 311
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 73/173 (42%), Gaps = 34/173 (19%)
Query: 78 PLRQPTA---QQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAI 132
P RQ A V+IN + S P+T+ G TN A L+ P + ++IE I +MGG
Sbjct: 97 PSRQAVAMPASDVIINKVMTSDTPVTIVATGPLTNVATALIREPRIVEHIESITLMGGG- 155
Query: 133 RSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
+ GN P AEFNI+ D AA V SGI + + LD T
Sbjct: 156 -----------------TFGNW-----TPTAEFNIWVDAEAAKRVFESGITINVFGLDVT 193
Query: 193 KTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWS-----GSPPFHEAYCM 240
+ ++ FE N AQ+ + L+ + T+ P H+A +
Sbjct: 194 HQVLADDHVIERFESINNPV-AQFVVELLQFFKKTYKTHFNMDGGPIHDACTI 245
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 113/283 (39%), Gaps = 55/283 (19%)
Query: 405 MGKPVVFDIDMSAGDFLALIYL--LKLPVELINLKGILVSSTGWATSATVDVVYDLLHMM 462
M + ++ D D D +ALI + P+E++ + + + + ++L +M
Sbjct: 1 MKRKIIMDCDPGHDDAIALILAGAIDSPLEILAVTTV---AGNQSVDKNTTNALNVLDIM 57
Query: 463 GRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRR 522
GR DI V G P I +A I SG LD LP +P R
Sbjct: 58 GRQDIAVAKG---------ADRPLIKPAAFASEIHGESG--LD-------GPKLPSTPSR 99
Query: 523 YTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQ-IIGL 581
+ P + + ++ S P +TI+ GPLTN+A +I
Sbjct: 100 QA-----------------VAMPASDVIINKVMTSDTP---VTIVATGPLTNVATALIRE 139
Query: 582 QNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
I+ + ++GG GN + AEFN+++D AAK VFES + I +
Sbjct: 140 PRIVEHIESITLMGGGTF-----GN-----WTPTAEFNIWVDAEAAKRVFESGITINVFG 189
Query: 642 LHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSH 684
L + +V + ++ + + P + F LLQ ++H
Sbjct: 190 LDVTHQVLADDHVIERF-ESINNPVAQFVVELLQFFKKTYKTH 231
>gi|427442930|ref|ZP_18925758.1| inosine-uridine nucleoside N-ribohydrolase [Pediococcus lolii NGRI
0510Q]
gi|425786578|dbj|GAC46546.1| inosine-uridine nucleoside N-ribohydrolase [Pediococcus lolii NGRI
0510Q]
Length = 315
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 108/246 (43%), Gaps = 39/246 (15%)
Query: 9 VGVGGEGGILPNGTILPDVGGYQPIIDQ-GMSTAGECRYRQAIPVGQ-----RL--YVNT 60
VGV G + + P V + IID G + E + PV Q RL +
Sbjct: 30 VGVSAVGA---DSYVEPAVSASRKIIDLFGSPSQLEVAQSDSRPVNQFPKEWRLSAFSFD 86
Query: 61 NYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHL 118
++ + L +G + +QP A ++ + S+ P+T+ + G T+ A L +P +
Sbjct: 87 DFPILNEHLNEGNPQTRLAKQP-AHLDMVQKLQQSSVPVTLVMTGPLTDLARALAVDPTI 145
Query: 119 KKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVL 178
I+ ++ MGG++ + IGN+ + AE+N F DP A TV
Sbjct: 146 TAKIDRLFWMGGSM----------------NGIGNVAEPAHDGTAEWNAFWDPEAVQTVF 189
Query: 179 HSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPF--HE 236
S +P+TI+ LD+T +P++ RQ + Q + +L +I +S F +
Sbjct: 190 DSDLPITIVSLDSTNQVPLTTAL------RQR-WAKQRQYPALDLIGQGYSLVHSFEANS 242
Query: 237 AYCMWD 242
Y +WD
Sbjct: 243 TYYLWD 248
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 108/223 (48%), Gaps = 26/223 (11%)
Query: 543 RQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS-SSVIQDVYIVGGNKGQD 601
+QP +D+ + + +S P +T++ GPLT+LA+ + + + ++ I ++ +GG+
Sbjct: 106 KQPAHLDMVQKLQQSSVP---VTLVMTGPLTDLARALAVDPTITAKIDRLFWMGGSM--- 159
Query: 602 NEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDR 661
N GNV AE+N F DP A + VF+S L I ++ L +V + LR R
Sbjct: 160 NGIGNVAEPAHDGTAEWNAFWDPEAVQTVFDSDLPITIVSLDSTNQV----PLTTALRQR 215
Query: 662 KKTPESVFSQRLLQGLMTLQQSH---HSYHHVDT-FLGEVLGAVILGGNPHLNQTYKIKS 717
QR L + Q + HS+ T +L +VL +I P L + K +
Sbjct: 216 WA------KQRQYPALDLIGQGYSLVHSFEANSTYYLWDVLTTLI-SKYPELVSS-KPLN 267
Query: 718 LEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEV 760
+++IS G IS G+ + G+ V + +N +YD F ++
Sbjct: 268 VKVISKG-IS-AGKTYPD-PTGRPVTFVTQVNADAFYDRFDQL 307
>gi|408530551|emb|CCK28725.1| nucleoside hydrolase [Streptomyces davawensis JCM 4913]
Length = 321
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 58/119 (48%), Gaps = 27/119 (22%)
Query: 77 APLRQPT---AQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGA 131
AP R+P A +L I A P +T+ TN A+ L +P + +NIE I MGGA
Sbjct: 97 APTRRPVDVDAVTLLRREILASPRPVTLIPTAPLTNIALLLRTHPEVVRNIERIVFMGGA 156
Query: 132 IRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLD 190
+ +GN + P AEFN++ DP AA +L +G+P+T+ LD
Sbjct: 157 V-----------------EVGN-----ATPVAEFNVWHDPEAAAILLTAGVPITMYGLD 193
>gi|372275877|ref|ZP_09511913.1| inosine-uridine preferring nucleoside hydrolase [Pantoea sp.
SL1_M5]
Length = 306
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 23/140 (16%)
Query: 80 RQPTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCF 137
+ P A Q +I+++ A P IT+ +G TN A + P + ++ + +MGGA +D
Sbjct: 94 QAPGAVQFIIDSVRAQPHQITLVAIGPLTNIATAINQAPDIIPLVKELVIMGGAFGTDGH 153
Query: 138 NSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPV 197
+ GN+ P++EFNI+ DP AA VL S + V +IPLD T + +
Sbjct: 154 S-------------GNV-----TPFSEFNIWKDPHAADQVLASALNVVVIPLDVTHKVLI 195
Query: 198 SENFFVEFERRQNTYEAQYC 217
S + E +R + C
Sbjct: 196 SGD---EVQRLNQPVLSAIC 212
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 80/150 (53%), Gaps = 16/150 (10%)
Query: 504 LDSDTLYGLARDL---PRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEP 560
++++ G +R L P +P R E+ G + DN + + P AV + I++S+
Sbjct: 55 INAEVYRGCSRPLALPPSAPARLHGEDG--LGDAFDNACSD-QAPGAV---QFIIDSVRA 108
Query: 561 G-SKITILTNGPLTNLAQIIG-LQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEF 618
+IT++ GPLTN+A I + +++++ I+GG G D GNV + ++EF
Sbjct: 109 QPHQITLVAIGPLTNIATAINQAPDIIPLVKELVIMGGAFGTDGHSGNV-----TPFSEF 163
Query: 619 NMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
N++ DP AA V S L + +IPL + +V
Sbjct: 164 NIWKDPHAADQVLASALNVVVIPLDVTHKV 193
>gi|349687112|ref|ZP_08898254.1| inosine-uridine preferring nucleoside hydrolase [Gluconacetobacter
oboediens 174Bp2]
Length = 309
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 60/139 (43%), Gaps = 27/139 (19%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP---ITVFVMGSHTNFAIFLM 113
+V+ G LP GR P A +I + P IT+ +G TN A+ L
Sbjct: 78 HVHGRTGFEGVDLPPPGRPATPGH---AVDFIIRTVMDNPPGAITLCTIGPLTNIALALA 134
Query: 114 NNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFA 173
P L++ I I +MG A +GN+ P AEFN++ DP A
Sbjct: 135 REPRLRERIGRIVMMGCAF----------------SEVGNI-----TPAAEFNVYVDPHA 173
Query: 174 AYTVLHSGIPVTIIPLDAT 192
A V SG+P+ + PLD T
Sbjct: 174 AEMVFASGVPIVVFPLDVT 192
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 98/246 (39%), Gaps = 45/246 (18%)
Query: 413 IDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIPVGLG 472
ID G AL LL L I L G+ + + T + L + GR DIPV
Sbjct: 5 IDTDPGQDDALTILLALASPEIELLGVTTVAGNVPLAQTTENALKTLDLAGRPDIPV--- 61
Query: 473 DVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENSVRFG 532
G P P + G GF G+ DLP R T ++V F
Sbjct: 62 ---HAGADRPLLRPGVTATHVH----GRTGF------EGV--DLPPPGRPATPGHAVDFI 106
Query: 533 ASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVY 592
D+P PG+ IT+ T GPLTN+A + L + + +
Sbjct: 107 IRTVMDNP-------------------PGA-ITLCTIGPLTNIA--LALAREPRLRERIG 144
Query: 593 IVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFF 652
+ +E GN+ + AEFN+++DP AA+ VF S + I + PL + ++ +
Sbjct: 145 RIVMMGCAFSEVGNI-----TPAAEFNVYVDPHAAEMVFASGVPIVVFPLDVTHQLHTSA 199
Query: 653 KILHKL 658
L ++
Sbjct: 200 ARLERI 205
>gi|118384506|ref|XP_001025401.1| Inosine-uridine preferring nucleoside hydrolase family protein
[Tetrahymena thermophila]
gi|89307168|gb|EAS05156.1| Inosine-uridine preferring nucleoside hydrolase family protein
[Tetrahymena thermophila SB210]
Length = 320
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 22/110 (20%)
Query: 103 GSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPY 162
G+++N AI L P +K IE I +MGG++ +GN P
Sbjct: 129 GAYSNLAILLTIYPDIKNYIEQISLMGGSV-----------------FLGN-----QTPA 166
Query: 163 AEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTY 212
AEFNI SDP AA V SG+ VT++P+D T + V++ + E ++ +
Sbjct: 167 AEFNIMSDPEAAQIVFQSGLRVTLVPIDLTHKVGVTQEIIQKIELYKSEF 216
Score = 46.6 bits (109), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 63/119 (52%), Gaps = 11/119 (9%)
Query: 543 RQPLAVDVWKSIVESIEPGS-KITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQ 600
++ + DV+ I +++ S K+ + G +NLA ++ + + + I+ + ++GG+
Sbjct: 101 QEAIEDDVFHKIYHTLKNQSQKVHFVATGAYSNLAILLTIYPDIKNYIEQISLMGGS--- 157
Query: 601 DNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLR 659
VF + AEFN+ DP AA+ VF+S L + L+P+ + +V +I+ K+
Sbjct: 158 ------VFLGNQTPAAEFNIMSDPEAAQIVFQSGLRVTLVPIDLTHKVGVTQEIIQKIE 210
>gi|187918883|ref|YP_001887914.1| inosine/uridine-preferring nucleoside hydrolase [Burkholderia
phytofirmans PsJN]
gi|187717321|gb|ACD18544.1| Inosine/uridine-preferring nucleoside hydrolase [Burkholderia
phytofirmans PsJN]
Length = 358
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 59/135 (43%), Gaps = 23/135 (17%)
Query: 70 PQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYV 127
P G L+ A +I I P +T+ +G TN A +M P + I+ I
Sbjct: 134 PDGFAVSTKLQAQGAADFMIQTIKRYPNQVTILEVGPPTNLATAIMKAPEIVPLIKRIVY 193
Query: 128 MGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTII 187
MGGA+ P ++N E N + DP A TVL + IP +I
Sbjct: 194 MGGAMA---------------------VPGNANAVGELNWWFDPLAVRTVLQTSIPQAVI 232
Query: 188 PLDATKTIPVSENFF 202
PLD T T+P++++ +
Sbjct: 233 PLDVTNTVPLTQSVY 247
>gi|50123341|ref|YP_052508.1| nucleoside hydrolase [Pectobacterium atrosepticum SCRI1043]
gi|49613867|emb|CAG77319.1| putative nucleoside hydrolase [Pectobacterium atrosepticum
SCRI1043]
Length = 323
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 21/97 (21%)
Query: 96 PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY 155
PIT+ +G TN A+ L +P + + I+ I M GA + +GN
Sbjct: 121 PITICSLGPMTNLALALCFHPDVARGIKQIVSMSGAFTA----------------MGNRV 164
Query: 156 PDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
P +A+FN+++DP AA V SG+PV I+PLD T
Sbjct: 165 P-----WADFNVYADPHAAEIVFSSGVPVVIMPLDVT 196
Score = 40.0 bits (92), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 564 ITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLD 623
ITI + GP+TNLA + L V + + + G GN VP +A+FN++ D
Sbjct: 122 ITICSLGPMTNLA--LALCFHPDVARGIKQIVSMSGAFTAMGN--RVP---WADFNVYAD 174
Query: 624 PLAAKAVFESKLEIKLIPL 642
P AA+ VF S + + ++PL
Sbjct: 175 PHAAEIVFSSGVPVVIMPL 193
>gi|380482015|emb|CCF41501.1| inosine-uridine preferring nucleoside hydrolase [Colletotrichum
higginsianum]
Length = 393
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 82/215 (38%), Gaps = 25/215 (11%)
Query: 84 AQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSS 143
A + A AG + GS TN A+ P L +I+ + +MGGAI D F
Sbjct: 119 AMAAALKAQPAGTAWLVATGSLTNVALLFQKYPDLVAHIKGLSIMGGAI-GDGFTDAILG 177
Query: 144 QSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHS---GIPVTIIPLDATKTIPVSEN 200
+ IGN P+AEFNI DP AA H+ T++PLD + + +E
Sbjct: 178 VVDGVKRIGNW-----TPWAEFNIIIDPEAAAAXFHNKALAAKTTLVPLDLSHQVLATEE 232
Query: 201 FF---------VEFERRQNTYEAQYCFQSLKMIRDTWS------GSPPFHEAYCMWDSFM 245
E + T Q + L T+S PP H+ + + +
Sbjct: 233 VRELLLYGKNGSEKTGKGKTTLRQMLVELLMFFAKTYSDVFGITAGPPLHDPLAV-AAVL 291
Query: 246 AGVALSIMLNSSSHNGENACSEMEYMNLTVVTSNE 280
AG I + + N E +TVVT +
Sbjct: 292 AGTKHEIPFHDYNTKKGNCVKYHERFEVTVVTEGD 326
>gi|434393799|ref|YP_007128746.1| Inosine/uridine-preferring nucleoside hydrolase [Gloeocapsa sp. PCC
7428]
gi|428265640|gb|AFZ31586.1| Inosine/uridine-preferring nucleoside hydrolase [Gloeocapsa sp. PCC
7428]
Length = 306
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 77/176 (43%), Gaps = 25/176 (14%)
Query: 47 RQAIPVGQ----------RLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SA 94
R IPV + RLY ++ + + +PL T Q+ ++ + +
Sbjct: 59 RDDIPVAESTVRGINPFPRLYRRDSFIVDHLPILNQSEVRSPLVSETGQEFMVRVLLDAP 118
Query: 95 GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNL 154
P+T+ V G T A+ L P ++ I I MGGA+ + N +S + G+
Sbjct: 119 EPVTLMVTGPLTTVAVALDTAPEIEAKIAKIVWMGGALNV----AGNVEKSLEAGQDGS- 173
Query: 155 YPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQN 210
AE+N++ DP +A V + I + + PLD T T+PV+ + +++
Sbjct: 174 --------AEWNVYWDPISAARVWQTQIEIIMCPLDLTNTVPVTSEIVYQMGKQRQ 221
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 146/354 (41%), Gaps = 60/354 (16%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
V+ D D D+LA + L+ + + I G++V+ V +L +MGRDDIP
Sbjct: 6 VLMDHDGGVDDYLATMLLMTM--DRIQPLGVVVTPADCYAQPAVSATRKILDLMGRDDIP 63
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V V + NP FP + Y + F+ D L L + RSP +E
Sbjct: 64 VAESTVRGI---NP-FPRL----YRR------DSFI-VDHLPILNQSEVRSP--LVSETG 106
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVI 588
F D PE +T++ GPLT +A + L + +
Sbjct: 107 QEFMVRVLLDAPE---------------------PVTLMVTGPLTTVA--VALDTAPEIE 143
Query: 589 QDVYIVGGNKGQDNEKGNV---FTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQ 645
+ + G N GNV AE+N++ DP++A V+++++EI + PL +
Sbjct: 144 AKIAKIVWMGGALNVAGNVEKSLEAGQDGSAEWNVYWDPISAARVWQTQIEIIMCPLDLT 203
Query: 646 RRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGG 705
V +I++++ +++ P S + Q + D + +VL L
Sbjct: 204 NTVPVTSEIVYQMGKQRQYPLSDLA----------GQCYALVIPQDYYFWDVLATAYL-A 252
Query: 706 NPHLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAE 759
+P + + ++ EI++ G +I G+ V ++ ++ + +YD+ +
Sbjct: 253 HPEFYELREWET-EIVTTGASQGRTKITPG---GRKVWAMDKVDKSSFYDYILQ 302
>gi|73661519|ref|YP_300300.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
gi|72494034|dbj|BAE17355.1| putative inosine-uridine preferring nucleoside hydrolase
[Staphylococcus saprophyticus subsp. saprophyticus ATCC
15305]
Length = 313
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 102/214 (47%), Gaps = 14/214 (6%)
Query: 546 LAVDVWKSIVESIEPG-SKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEK 604
L D ++ I+E ++ + +T+L GPLT+LA+ + ++ ++I + + G EK
Sbjct: 101 LEHDAYEDIIEKLQKSHAPVTLLFTGPLTDLAKAVTVE--PTIINKIERLVWMGGTFLEK 158
Query: 605 GNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKT 664
GNV AE+N F DP + K VF++ ++I ++ L RV + I + +
Sbjct: 159 GNVEEPEHDGTAEWNAFWDPESVKTVFDTNIKIDIVALESTNRVPLTWDIRQAWANERHY 218
Query: 665 PESVFSQRLLQGL--MTLQQSHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKSLEIIS 722
P F + +T Q++ +Y FL +VL + G P L Q + + + + +
Sbjct: 219 PGVDFLGVSYAAVPPLTHFQTNSTY-----FLWDVLTTAYV-GEPELVQQHSVNA-SVYT 271
Query: 723 DGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDH 756
+G GQ ++ G+ + V++ + ++ +
Sbjct: 272 EG--PSQGQTYIDDVHGRTISVVDDVEHDAFFKY 303
Score = 46.6 bits (109), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 98/246 (39%), Gaps = 37/246 (15%)
Query: 9 VGVGGEGGILPNGTILPDVGGYQPIIDQGMS-----TAGECRYRQAIPVGQRLYVNTNYG 63
V + G I + + P Q II++ A + R + P R++
Sbjct: 27 VSLIGVSAIGADSYVEPAASASQKIINRFSKQPIHVAASKQRGKNPFPKDWRMHAFFMDA 86
Query: 64 LRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKN 121
L L + + ++ L + A + +I + S P+T+ G T+ A + P +
Sbjct: 87 L--PILNEANQSHSNLLEHDAYEDIIEKLQKSHAPVTLLFTGPLTDLAKAVTVEPTIINK 144
Query: 122 IEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSG 181
IE + MGG GN+ + + AE+N F DP + TV +
Sbjct: 145 IERLVWMGGTFLEK----------------GNVEEPEHDGTAEWNAFWDPESVKTVFDTN 188
Query: 182 IPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPF-----HE 236
I + I+ L++T +P++ ++ RQ + + + + + +++ PP +
Sbjct: 189 IKIDIVALESTNRVPLT------WDIRQ-AWANERHYPGVDFLGVSYAAVPPLTHFQTNS 241
Query: 237 AYCMWD 242
Y +WD
Sbjct: 242 TYFLWD 247
>gi|381336385|ref|YP_005174160.1| ribonucleoside hydrolase RihC [Leuconostoc mesenteroides subsp.
mesenteroides J18]
gi|356644351|gb|AET30194.1| ribonucleoside hydrolase RihC [Leuconostoc mesenteroides subsp.
mesenteroides J18]
Length = 310
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 64/136 (47%), Gaps = 23/136 (16%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNP 116
Y++ G+ PQ ++ L TA + A S P+T+ GS+TN A+ + P
Sbjct: 79 YIHGESGMPGYDFPQVTKEAIKLDAVTAMAEELEA-SIVPMTIVATGSYTNIAMLIQKYP 137
Query: 117 HLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYT 176
L IE +MGG++ S GN+ + AEFN+F+DP AA
Sbjct: 138 SLLHKIEKFVLMGGSL-----------------SGGNV-----SSVAEFNVFTDPDAADI 175
Query: 177 VLHSGIPVTIIPLDAT 192
V SG+P+ +I LD T
Sbjct: 176 VFKSGVPIVMIGLDVT 191
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 73/155 (47%), Gaps = 17/155 (10%)
Query: 543 RQPLAVDVWKSIVESIEPG-SKITILTNGPLTNLAQIIGLQNSSSV---IQDVYIVGGNK 598
++ + +D ++ E +E +TI+ G TN+A +I Q S+ I+ ++GG+
Sbjct: 96 KEAIKLDAVTAMAEELEASIVPMTIVATGSYTNIAMLI--QKYPSLLHKIEKFVLMGGSL 153
Query: 599 GQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKL 658
GNV S AEFN+F DP AA VF+S + I +I L + + F+ + +
Sbjct: 154 ----SGGNV-----SSVAEFNVFTDPDAADIVFKSGVPIVMIGLDVTLKALLPFETIDAI 204
Query: 659 RDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTF 693
+ + E + Q+++ + H V+T
Sbjct: 205 GSQGEAGEML--QKVMTAYGDTAEGGKPMHDVNTI 237
>gi|146310836|ref|YP_001175910.1| ribonucleoside hydrolase 1 [Enterobacter sp. 638]
gi|166977469|sp|A4W829.1|RIHA_ENT38 RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|145317712|gb|ABP59859.1| Purine nucleosidase [Enterobacter sp. 638]
Length = 313
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 24/112 (21%)
Query: 83 TAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNST 140
TA ++++ + S P+T+ G TN A+ L ++P L + I I +MGG++
Sbjct: 103 TAVELMVKVLRESDEPVTLVATGPQTNVALLLNSHPELHRKIARIVIMGGSM-------- 154
Query: 141 NSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
+GN P AEFNIF DP AA V SG+P+ + LD T
Sbjct: 155 ---------GLGNW-----TPAAEFNIFVDPEAAEIVFQSGLPIVMAGLDVT 192
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 103/264 (39%), Gaps = 67/264 (25%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + LK + S+ T+ V +L ++ R
Sbjct: 1 MALPIILDCDPGHDDAIALVLALASPE--LALKAVTSSAGNQTPDKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV GG + L RDL
Sbjct: 59 TDIPVA-----------------GGARKP------------------LMRDL------II 77
Query: 525 AENSVRFGASQDNDDPELRQPL-------AVDVW-KSIVESIEPGSKITILTNGPLTNLA 576
A+N D P L +P AV++ K + ES EP +T++ GP TN+A
Sbjct: 78 ADN---VHGETGLDGPALPEPTFKPQACTAVELMVKVLRESDEP---VTLVATGPQTNVA 131
Query: 577 QIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ I + I+GG+ G N + AEFN+F+DP AA+ VF+S L
Sbjct: 132 LLLNSHPELHRKIARIVIMGGSMGLGN---------WTPAAEFNIFVDPEAAEIVFQSGL 182
Query: 636 EIKLIPLHMQRRVASFFKILHKLR 659
I + L + R + + R
Sbjct: 183 PIVMAGLDVTHRAQIMSADVERFR 206
>gi|259502037|ref|ZP_05744939.1| cytidine/uridine-specific hydrolase [Lactobacillus antri DSM 16041]
gi|259170001|gb|EEW54496.1| cytidine/uridine-specific hydrolase [Lactobacillus antri DSM 16041]
Length = 302
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 24/142 (16%)
Query: 78 PLRQPTAQQVLINAISA-GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDC 136
P++Q TA + L +AI A +T+ GS+TN A+ L P +K +I+ I MGG++
Sbjct: 98 PIKQ-TAVEALHDAIMAEDEVTLVPTGSYTNIALLLSEYPEVKSHIKRIVAMGGSM---- 152
Query: 137 FNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIP 196
S GN+ AEFN+F+DP AA + +SGIP+ ++ LD T
Sbjct: 153 -------------SGGNM-----TSVAEFNVFTDPDAARIMYNSGIPIVMVGLDVTLKAL 194
Query: 197 VSENFFVEFERRQNTYEAQYCF 218
++++ + + T E +
Sbjct: 195 LTKDTIEKLGQMNKTGEMLHAL 216
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 66/137 (48%), Gaps = 16/137 (11%)
Query: 544 QPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIG-LQNSSSVIQDVYIVGGNKGQDN 602
QP+ +++ ++I ++T++ G TN+A ++ S I+ + +GG+
Sbjct: 97 QPIKQTAVEALHDAIMAEDEVTLVPTGSYTNIALLLSEYPEVKSHIKRIVAMGGSM---- 152
Query: 603 EKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRK 662
GN+ +V AEFN+F DP AA+ ++ S + I ++ L + + + KL
Sbjct: 153 SGGNMTSV-----AEFNVFTDPDAARIMYNSGIPIVMVGLDVTLKALLTKDTIEKLGQMN 207
Query: 663 KTPESVFSQRLLQGLMT 679
KT E +L L+T
Sbjct: 208 KTGE------MLHALIT 218
>gi|300937882|ref|ZP_07152674.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 21-1]
gi|432679085|ref|ZP_19914485.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE143]
gi|300457107|gb|EFK20600.1| inosine-uridine preferring nucleoside hydrolase [Escherichia coli
MS 21-1]
gi|431224483|gb|ELF21704.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE143]
Length = 311
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 64/137 (46%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + S P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPE--PTFAP-QNCTAVELMAKTLCESEEPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAVKPLMREL----------------IIADNVHGESGLDGPALPEPT 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVELMA-------KTLCESEEP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHVEDTERFR 206
>gi|67920010|ref|ZP_00513530.1| Inosine/uridine-preferring nucleoside hydrolase [Crocosphaera
watsonii WH 8501]
gi|67857494|gb|EAM52733.1| Inosine/uridine-preferring nucleoside hydrolase [Crocosphaera
watsonii WH 8501]
Length = 307
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 157/363 (43%), Gaps = 69/363 (19%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M K V+FD D + DFLA + L+ +P I + GI+V+ +A ++V LL +MG
Sbjct: 1 MTKLVLFDHDGAIDDFLATLLLMTMPN--IEVLGIIVTPADCYINAALNVTRKLLDLMGC 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
D IPV V +NP FP + Y
Sbjct: 59 DPIPVAES---TVRGINP-FPAL-----------------------------------YR 79
Query: 525 AENSVRFGASQDNDDPELRQPLAVDVWKS-IVESIEPGSK-ITILTNGPLTNLAQIIGLQ 582
++ + N + ++ PL + +VE++ S+ +T++ GPLT +A + +
Sbjct: 80 RDSLIIDNFPILNQENTIKTPLVSQTGQQFMVETLHRASEPVTLMVTGPLTTVATALDID 139
Query: 583 NS-SSVIQDVYIVGGNKGQDNEKGNV---FTVPSSKYAEFNMFLDPLAAKAVFESKLEIK 638
+ + I+++ +GG N GNV F AE+N + D +A + V+++ + +
Sbjct: 140 PTIENKIKEIVWMGGAL---NVAGNVEKEFAPEHDGSAEWNAYWDAIAVQKVWQTNIPLI 196
Query: 639 LIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVL 698
+ PL + +V + + +L ++++ S L GL Y+ D L
Sbjct: 197 VCPLDITNKVPVTPEFIRRLAKQRQSQLSD-----LAGLCYALAIPQDYYCWDVLATSYL 251
Query: 699 GAVILGGNPHLNQTYKIKSL--EIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDH 756
H + + +KS E+I+ G + G+I V E+G+ + +++++ ++D+
Sbjct: 252 ---------HRSDLFSLKSWPTEVITTG--TSQGRIKV-VEKGRNILAMDTIDKDQFHDY 299
Query: 757 FAE 759
+
Sbjct: 300 ILQ 302
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 15/146 (10%)
Query: 68 FLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHI 125
L Q PL T QQ ++ + ++ P+T+ V G T A L +P ++ I+ I
Sbjct: 90 ILNQENTIKTPLVSQTGQQFMVETLHRASEPVTLMVTGPLTTVATALDIDPTIENKIKEI 149
Query: 126 YVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVT 185
MGGA+ N + + E + + + AE+N + D A V + IP+
Sbjct: 150 VWMGGAL-----NVAGNVEKE--------FAPEHDGSAEWNAYWDAIAVQKVWQTNIPLI 196
Query: 186 IIPLDATKTIPVSENFFVEFERRQNT 211
+ PLD T +PV+ F +++ +
Sbjct: 197 VCPLDITNKVPVTPEFIRRLAKQRQS 222
>gi|422975465|ref|ZP_16976684.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
TA124]
gi|432848968|ref|ZP_20080338.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE144]
gi|371594997|gb|EHN83851.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
TA124]
gi|431401710|gb|ELG85044.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE144]
Length = 311
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 64/137 (46%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + S P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPE--PTFAP-QNCTAVELMAKTLRESEEPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAVKPLMREL----------------IIADNVHGESGLDGPALPEPT 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVELMA-------KTLRESEEP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHVEDTERFR 206
>gi|304385715|ref|ZP_07368059.1| cytidine/uridine-specific hydrolase [Pediococcus acidilactici DSM
20284]
gi|418069985|ref|ZP_12707262.1| ribonucleoside hydrolase RihC [Pediococcus acidilactici MA18/5M]
gi|304328219|gb|EFL95441.1| cytidine/uridine-specific hydrolase [Pediococcus acidilactici DSM
20284]
gi|357536516|gb|EHJ20547.1| ribonucleoside hydrolase RihC [Pediococcus acidilactici MA18/5M]
Length = 304
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 59/122 (48%), Gaps = 24/122 (19%)
Query: 73 GRKYAPLRQPTAQQVLINAISAG--PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGG 130
G + A + A +VL I A PIT+ GS+TN A+ L +P +K I+ I MGG
Sbjct: 92 GEEPAEVPANNAVEVLYQTIMANDDPITLVPTGSYTNIALLLKEHPDVKGKIKKIVAMGG 151
Query: 131 AIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLD 190
+I +GN+ AEFN+F+DP AA V S IP+ ++ LD
Sbjct: 152 SI-----------------GMGNM-----TSAAEFNVFTDPHAAEIVYQSEIPIVMVGLD 189
Query: 191 AT 192
T
Sbjct: 190 VT 191
Score = 39.7 bits (91), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 64/122 (52%), Gaps = 14/122 (11%)
Query: 547 AVDV-WKSIVESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEK 604
AV+V +++I+ + +P IT++ G TN+A ++ + I+ + +GG+ G N
Sbjct: 103 AVEVLYQTIMANDDP---ITLVPTGSYTNIALLLKEHPDVKGKIKKIVAMGGSIGMGN-- 157
Query: 605 GNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKT 664
+ AEFN+F DP AA+ V++S++ I ++ L + + + + ++D K
Sbjct: 158 -------MTSAAEFNVFTDPHAAEIVYQSEIPIVMVGLDVTMKALLTPETIATIKDLGKP 210
Query: 665 PE 666
E
Sbjct: 211 GE 212
>gi|270291139|ref|ZP_06197362.1| purine nucleosidase [Pediococcus acidilactici 7_4]
gi|270280535|gb|EFA26370.1| purine nucleosidase [Pediococcus acidilactici 7_4]
Length = 315
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 108/246 (43%), Gaps = 39/246 (15%)
Query: 9 VGVGGEGGILPNGTILPDVGGYQPIIDQ-GMSTAGECRYRQAIPVGQ-----RL--YVNT 60
VGV G + + P V + IID G + E + PV Q RL +
Sbjct: 30 VGVSAVGA---DSYVEPAVSASRKIIDLFGSPSQLEVAQSDSRPVNQFPKEWRLSAFSFD 86
Query: 61 NYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHL 118
++ + L +G + +QP A ++ + S+ P+T+ + G T+ A L +P +
Sbjct: 87 DFPILNEHLNEGNPQTRLAKQP-AHLDMVQKLQQSSVPVTLVMTGPLTDLARALAVDPTI 145
Query: 119 KKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVL 178
I+ ++ MGG++ + IGN+ + AE+N F DP A TV
Sbjct: 146 TAKIDRLFWMGGSM----------------NGIGNVAEPAHDGSAEWNAFWDPEAVQTVF 189
Query: 179 HSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPF--HE 236
S +P+TI+ LD+T +P++ RQ + Q + +L +I +S F +
Sbjct: 190 DSDLPITIVSLDSTNQVPLTTAL------RQR-WAKQRQYPALDLIGQGYSLVHSFEANS 242
Query: 237 AYCMWD 242
Y +WD
Sbjct: 243 TYYLWD 248
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 109/223 (48%), Gaps = 26/223 (11%)
Query: 543 RQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS-SSVIQDVYIVGGNKGQD 601
+QP +D+ + + +S P +T++ GPLT+LA+ + + + ++ I ++ +GG+
Sbjct: 106 KQPAHLDMVQKLQQSSVP---VTLVMTGPLTDLARALAVDPTITAKIDRLFWMGGSM--- 159
Query: 602 NEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDR 661
N GNV AE+N F DP A + VF+S L I ++ L +V + LR R
Sbjct: 160 NGIGNVAEPAHDGSAEWNAFWDPEAVQTVFDSDLPITIVSLDSTNQV----PLTTALRQR 215
Query: 662 KKTPESVFSQRLLQGLMTLQQSH---HSYHHVDT-FLGEVLGAVILGGNPHLNQTYKIKS 717
QR L + Q + HS+ T +L +VL +I P L + K +
Sbjct: 216 WA------KQRQYPALDLIGQGYSLVHSFEANSTYYLWDVLTTLI-SKYPELVSS-KPLN 267
Query: 718 LEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEV 760
++++S G IS G+ + G+ V + +N A +YD F ++
Sbjct: 268 VKVVSKG-IS-AGKTYPD-PAGRPVTFVTQVNAAAFYDRFDQL 307
>gi|390436218|ref|ZP_10224756.1| inosine-uridine preferring nucleoside hydrolase [Pantoea
agglomerans IG1]
Length = 306
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 23/140 (16%)
Query: 80 RQPTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCF 137
+ P A Q +I+++ A P IT+ +G TN A + P + ++ + +MGGA +D
Sbjct: 94 QAPGAVQFIIDSVRAQPHQITLVAIGPLTNIATAINQAPDIIPLVKELVIMGGAFGTDGH 153
Query: 138 NSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPV 197
+ GN+ P++EFNI+ DP AA VL S + V +IPLD T + +
Sbjct: 154 S-------------GNV-----TPFSEFNIWKDPHAADQVLASALNVVVIPLDVTHKVLI 195
Query: 198 SENFFVEFERRQNTYEAQYC 217
S + E +R + C
Sbjct: 196 SGD---EVQRLNQPVLSAIC 212
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 78/150 (52%), Gaps = 16/150 (10%)
Query: 504 LDSDTLYGLARDL---PRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEP 560
++++ G +R L P +P R E+ + + D + P AV + I++S+
Sbjct: 55 INAEVYRGCSRPLALPPSAPARLHGEDGLGDAFNNACSD---QAPGAV---QFIIDSVRA 108
Query: 561 G-SKITILTNGPLTNLAQIIG-LQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEF 618
+IT++ GPLTN+A I + +++++ I+GG G D GNV + ++EF
Sbjct: 109 QPHQITLVAIGPLTNIATAINQAPDIIPLVKELVIMGGAFGTDGHSGNV-----TPFSEF 163
Query: 619 NMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
N++ DP AA V S L + +IPL + +V
Sbjct: 164 NIWKDPHAADQVLASALNVVVIPLDVTHKV 193
>gi|118373638|ref|XP_001020012.1| Inosine-uridine preferring nucleoside hydrolase family protein
[Tetrahymena thermophila]
gi|89301779|gb|EAR99767.1| Inosine-uridine preferring nucleoside hydrolase family protein
[Tetrahymena thermophila SB210]
Length = 295
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 52/106 (49%), Gaps = 22/106 (20%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
I G+ TN AI L P +K+ IE I +MGG+I ++GN
Sbjct: 124 IYFIATGALTNLAILLTIYPDIKQYIEQISIMGGSI-----------------TLGN--- 163
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFF 202
S P AEFNI+ DP AA V ++ +P+ + PLD T + V N +
Sbjct: 164 --STPAAEFNIYMDPEAARIVFNAQVPLAMCPLDLTLKVKVDSNSY 207
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 11/102 (10%)
Query: 549 DVWKSIVESIEP-GSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEKGN 606
DV+ I E I+ G KI + G LTNLA ++ + + I+ + I+GG+ N
Sbjct: 108 DVFNKIYEVIKSQGKKIYFIATGALTNLAILLTIYPDIKQYIEQISIMGGSITLGN---- 163
Query: 607 VFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
S+ AEFN+++DP AA+ VF +++ + + PL + +V
Sbjct: 164 -----STPAAEFNIYMDPEAARIVFNAQVPLAMCPLDLTLKV 200
>gi|269122322|ref|YP_003310499.1| ribosylpyrimidine nucleosidase [Sebaldella termitidis ATCC 33386]
gi|268616200|gb|ACZ10568.1| Ribosylpyrimidine nucleosidase [Sebaldella termitidis ATCC 33386]
Length = 310
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 76/180 (42%), Gaps = 36/180 (20%)
Query: 73 GRKYAPLRQPTAQQVLINAI------SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIY 126
G + PL+ ++ I I S IT+ +G +N A+ + P + I+ I
Sbjct: 89 GPVFEPLKIKAEEKHAITYIIETLMTSDNDITLVPIGPLSNIAMAMRIEPRIIPKIKEIV 148
Query: 127 VMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTI 186
+MGGA +IGN P AEFN F+DP AA+ V SG+P+ +
Sbjct: 149 LMGGAY-----------------AIGNF-----TPSAEFNFFADPEAAHVVFTSGVPIVM 186
Query: 187 IPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDT------WSGSPPFHEAYCM 240
+ LD T +E E N A +C ++ + T SG P H+A C+
Sbjct: 187 MGLDLTNQTVCTEEVIKRMEAIGNKASALFC-DIMRFVLKTQNEEFGLSGG-PLHDATCI 244
>gi|86606550|ref|YP_475313.1| inosine-uridine preferring nucleoside hydrolase family protein
[Synechococcus sp. JA-3-3Ab]
gi|86555092|gb|ABD00050.1| Inosine-uridine preferring nucleoside hydrolase family protein
[Synechococcus sp. JA-3-3Ab]
Length = 310
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 67/141 (47%), Gaps = 28/141 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAG--PITVFVMGSHTNFAIFLMNN 115
V+ G+ A LP+ PL A Q LI + A P+T+ ++G TN A+ L+
Sbjct: 80 VHGKSGIDGANLPE---PQMPLGSLHAVQYLIETLMAAQEPVTLALLGPMTNLAVALVQQ 136
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P + + I + MGG+ + ++ P AEFNIF+DP AA
Sbjct: 137 PRIVERIRRLVFMGGSA----------------------FEGNTTPAAEFNIFTDPHAAQ 174
Query: 176 TVLHSGIP-VTIIPLDATKTI 195
VL +GIP V ++ L+ T+ +
Sbjct: 175 IVLSAGIPEVVMLGLNVTQQV 195
Score = 39.3 bits (90), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 66/123 (53%), Gaps = 11/123 (8%)
Query: 540 PELRQPL-AVDVWKSIVESIEPGSK-ITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGN 597
PE + PL ++ + ++E++ + +T+ GP+TNLA +++Q IV
Sbjct: 92 PEPQMPLGSLHAVQYLIETLMAAQEPVTLALLGPMTNLA--------VALVQQPRIVERI 143
Query: 598 KGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL-EIKLIPLHMQRRVASFFKILH 656
+ G+ F ++ AEFN+F DP AA+ V + + E+ ++ L++ ++V S + +
Sbjct: 144 RRLVFMGGSAFEGNTTPAAEFNIFTDPHAAQIVLSAGIPEVVMLGLNVTQQVLSTPERIE 203
Query: 657 KLR 659
++R
Sbjct: 204 RIR 206
>gi|374315000|ref|YP_005061428.1| Inosine-uridine nucleoside N-ribohydrolase [Sphaerochaeta
pleomorpha str. Grapes]
gi|359350644|gb|AEV28418.1| Inosine-uridine nucleoside N-ribohydrolase [Sphaerochaeta
pleomorpha str. Grapes]
Length = 313
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 111/265 (41%), Gaps = 50/265 (18%)
Query: 409 VVFDIDMSAGDFLALIYLLKLP-VELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDI 467
++ D+D D LAL Y + P +E++ + G + T T V D+LH++ +D +
Sbjct: 4 MILDLDTGVDDSLALAYAIANPDIEVLGVTGTYGNVT---TEQGVRNSLDILHLLEKDSV 60
Query: 468 PVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAEN 527
PV G+ A+ +V + R EN
Sbjct: 61 PVFKGEDHAMDKVVFTRHEVSA--------------------------------RIHGEN 88
Query: 528 SVRFGASQDNDDPELRQPLAVDVWKSIVESIEP-GSKITILTNGPLTNLAQIIGLQ-NSS 585
G Q P +P + D I+ S + G ++T++T GPLTNLA + +
Sbjct: 89 ----GVGQVTLPPASAKPESTDAIDFIIASCKRWGKELTLVTTGPLTNLATALEKEPEIE 144
Query: 586 SVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQ 645
+I V ++GG GNV S +AE N+ DP AA+ VFE+ ++I ++ L +
Sbjct: 145 HMIGKVIVMGGAL---TVCGNV-----SHFAEANISQDPCAARNVFETSMDITMVGLDVT 196
Query: 646 RRVASFFKILHKLRDRKKTPESVFS 670
+R K R+ K +F+
Sbjct: 197 QRSRLDKKATQSWRNLKTISGRLFA 221
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 21/97 (21%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
+T+ G TN A L P ++ I + VMGGA+ + C N ++
Sbjct: 122 LTLVTTGPLTNLATALEKEPEIEHMIGKVIVMGGAL-TVCGNVSH--------------- 165
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
+AE NI DP AA V + + +T++ LD T+
Sbjct: 166 -----FAEANISQDPCAARNVFETSMDITMVGLDVTQ 197
>gi|294810974|ref|ZP_06769617.1| Inosine-uridine preferring nucleoside hydrolase [Streptomyces
clavuligerus ATCC 27064]
gi|326439685|ref|ZP_08214419.1| ribosylpyrimidine nucleosidase [Streptomyces clavuligerus ATCC
27064]
gi|294323573|gb|EFG05216.1| Inosine-uridine preferring nucleoside hydrolase [Streptomyces
clavuligerus ATCC 27064]
Length = 320
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 58/146 (39%), Gaps = 28/146 (19%)
Query: 96 PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY 155
P+T+ G TN A+ L P +I I +MGG S G
Sbjct: 122 PVTLVPTGPLTNIALLLTRYPECASSIREIVLMGG-------------------SAGR-- 160
Query: 156 PDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQ 215
+ P AEFNI +DP AA V SG+PVT+ LD T ++ T A+
Sbjct: 161 -GNRTPAAEFNILADPEAADIVFRSGLPVTMCGLDVTHQALATDEVVARLA-ALGTEPAR 218
Query: 216 YCFQSLKMIRDTWSG-----SPPFHE 236
C + + DT+ PP H+
Sbjct: 219 MCVELIAFFADTYRRLWGFPCPPVHD 244
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 24/166 (14%)
Query: 501 GGFLDSDTLYGLARDLPRSP------RRYTAENSVRFGASQDNDDPELRQPLAVDVWKSI 554
G D G AR L R+P + + RFG + PE AV++ + +
Sbjct: 60 AGITDVPVAAGCARPLVRAPIVAGDVHGESGLDGPRFGEPRVRAVPEH----AVELTRRV 115
Query: 555 V-ESIEPGSKITILTNGPLTNLAQIIG-LQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPS 612
+ E EP +T++ GPLTN+A ++ +S I+++ ++GG+ G+ N
Sbjct: 116 LTEHPEP---VTLVPTGPLTNIALLLTRYPECASSIREIVLMGGSAGRGNR--------- 163
Query: 613 SKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKL 658
+ AEFN+ DP AA VF S L + + L + + + +++ +L
Sbjct: 164 TPAAEFNILADPEAADIVFRSGLPVTMCGLDVTHQALATDEVVARL 209
>gi|377830945|ref|ZP_09813935.1| inosine/uridine-preferring nucleoside hydrolase [Lactobacillus
mucosae LM1]
gi|377555229|gb|EHT16918.1| inosine/uridine-preferring nucleoside hydrolase [Lactobacillus
mucosae LM1]
Length = 307
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 73/170 (42%), Gaps = 23/170 (13%)
Query: 73 GRKYAPLRQPTAQQVLINAISA-GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGA 131
G Y + +A Q L +AI A IT+ GS+TN A+ P +K +I+ I MGG+
Sbjct: 95 GNDYGAPIEKSAVQALRDAIMAEDEITLVPTGSYTNIALLFKEFPEVKSHIKQIVAMGGS 154
Query: 132 IRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDA 191
+ GN+ AEFN+F+DP AA + SG+P+ + LD
Sbjct: 155 LTG-----------------GNM-----TSVAEFNVFTDPHAAEIMYKSGVPIVTVGLDV 192
Query: 192 TKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPFHEAYCMW 241
T ++++ + T + Y S +G P H+ ++
Sbjct: 193 TLKALLTQDSLNAIKDMNETGKMLYGLISHYNDVSAETGGHPMHDVNTIF 242
>gi|416385476|ref|ZP_11684773.1| Inosine/uridine-preferring nucleoside hydrolase [Crocosphaera
watsonii WH 0003]
gi|357264856|gb|EHJ13688.1| Inosine/uridine-preferring nucleoside hydrolase [Crocosphaera
watsonii WH 0003]
Length = 307
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 156/363 (42%), Gaps = 69/363 (19%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M K V+FD D + DFLA + L+ +P I + GI+V+ +A ++V LL +MG
Sbjct: 1 MTKLVLFDHDGAIDDFLATLLLMTMPN--IEVLGIIVTPADCYINAALNVTRKLLDLMGC 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
D IPV V +NP FP + Y
Sbjct: 59 DPIPVAES---TVRGINP-FPAL-----------------------------------YR 79
Query: 525 AENSVRFGASQDNDDPELRQPLAVDVWKS-IVESIEPGSK-ITILTNGPLTNLAQIIGLQ 582
++ + N + ++ PL + +VE++ S+ +T++ GPLT +A + +
Sbjct: 80 RDSLIIDNFPILNQENTIKTPLVSQTGQQFMVETLHRASEPVTLMVTGPLTTVATALDID 139
Query: 583 NS-SSVIQDVYIVGGNKGQDNEKGNV---FTVPSSKYAEFNMFLDPLAAKAVFESKLEIK 638
+ + I+++ +GG N GNV F AE+N + D +A + V+++ + +
Sbjct: 140 PTIENKIKEIVWMGGAL---NVAGNVEKEFAPEHDGSAEWNAYWDAIAVQKVWQTNIPLI 196
Query: 639 LIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVL 698
+ PL + +V + + +L +++ + L GL Y+ D L
Sbjct: 197 VCPLDITNKVPVTPEFIRRLAKQRQ-----YQLSDLAGLCYALAIPQDYYCWDVLATSYL 251
Query: 699 GAVILGGNPHLNQTYKIKSL--EIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDH 756
H + + +KS E+I+ G + G+I V E+G+ + +++++ ++D+
Sbjct: 252 ---------HRSDLFSLKSWPTEVITTG--TSQGRIKV-VEKGRNILAMDTIDKDQFHDY 299
Query: 757 FAE 759
+
Sbjct: 300 ILQ 302
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 15/144 (10%)
Query: 68 FLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHI 125
L Q PL T QQ ++ + ++ P+T+ V G T A L +P ++ I+ I
Sbjct: 90 ILNQENTIKTPLVSQTGQQFMVETLHRASEPVTLMVTGPLTTVATALDIDPTIENKIKEI 149
Query: 126 YVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVT 185
MGGA+ N + + E + + + AE+N + D A V + IP+
Sbjct: 150 VWMGGAL-----NVAGNVEKE--------FAPEHDGSAEWNAYWDAIAVQKVWQTNIPLI 196
Query: 186 IIPLDATKTIPVSENFFVEFERRQ 209
+ PLD T +PV+ F +++
Sbjct: 197 VCPLDITNKVPVTPEFIRRLAKQR 220
>gi|50085474|ref|YP_046984.1| inosine-uridine preferring nucleoside hydrolase [Acinetobacter sp.
ADP1]
gi|49531450|emb|CAG69162.1| ribonucleoside hydrolase [Acinetobacter sp. ADP1]
Length = 315
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 60/136 (44%), Gaps = 24/136 (17%)
Query: 78 PLRQPTAQQVLINAISAGP---ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
PL+ + +I + P IT+ +G TN A L+ P + ++ I +MGG
Sbjct: 101 PLQAQHSVDFIIETLRNAPEKTITICSLGPMTNTAQALLKAPDIAARVKRIVLMGGGF-- 158
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKT 194
F N + P AEFN+F DP AA V +GIP+T+IPLD T
Sbjct: 159 --FEGGNIT-----------------PSAEFNMFVDPDAAKIVFAAGIPLTVIPLDVTHQ 199
Query: 195 IPVSENFFVEFERRQN 210
+ S+ + R N
Sbjct: 200 VLTSKEWVDGLRRMDN 215
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 72/127 (56%), Gaps = 18/127 (14%)
Query: 540 PELRQPL----AVDVWKSIVESIE--PGSKITILTNGPLTNLAQ-IIGLQNSSSVIQDVY 592
PE + PL +VD I+E++ P ITI + GP+TN AQ ++ + ++ ++ +
Sbjct: 96 PEPQMPLQAQHSVDF---IIETLRNAPEKTITICSLGPMTNTAQALLKAPDIAARVKRIV 152
Query: 593 IVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFF 652
++GG E GN+ PS AEFNMF+DP AAK VF + + + +IPL + +V +
Sbjct: 153 LMGGGF---FEGGNI--TPS---AEFNMFVDPDAAKIVFAAGIPLTVIPLDVTHQVLTSK 204
Query: 653 KILHKLR 659
+ + LR
Sbjct: 205 EWVDGLR 211
>gi|331696016|ref|YP_004332255.1| inosine/uridine-preferring nucleoside hydrolase [Pseudonocardia
dioxanivorans CB1190]
gi|326950705|gb|AEA24402.1| Inosine/uridine-preferring nucleoside hydrolase [Pseudonocardia
dioxanivorans CB1190]
Length = 313
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 82/207 (39%), Gaps = 40/207 (19%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
S+ P+T+ +G TN A+ L +P L I I MGGA+ +G
Sbjct: 119 SSVPVTIVCLGPMTNTALLLAAHPELTPRIGRIVAMGGAL-----------------GMG 161
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVL-HSGIPVTIIPLDATKTIPVSENFFVEFERRQNT 211
N + EFN+++DP AA+ VL +PVT++PLD T + + Q
Sbjct: 162 N-----TRGAGEFNVYADPEAAHRVLTQPEVPVTLVPLDLTMNCTADDQWLETLS--QAG 214
Query: 212 YEAQYCFQSLKMIRDTWS-----GSPPFHEAYCMWDSFMAGVALSIMLNSSSHNGENACS 266
++ + R+ + H+ M ++ G L ++ H AC+
Sbjct: 215 PRCATLVRTAALYREATRERYNLDAIALHDMLAMLEAIRPGT-----LRTTPHRVNVACT 269
Query: 267 EMEYMNLTVVTSNEPYGISDGSNPLID 293
+TV P D S PL+D
Sbjct: 270 LGPGRGMTV-----PDRRPDASGPLVD 291
>gi|392970569|ref|ZP_10335973.1| putative inosine/uridine-preferring nucleoside hydrolase
[Staphylococcus equorum subsp. equorum Mu2]
gi|392511268|emb|CCI59192.1| putative inosine/uridine-preferring nucleoside hydrolase
[Staphylococcus equorum subsp. equorum Mu2]
Length = 313
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 551 WKSIVESIE-PGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFT 609
++ I++ ++ P K+T+L GPLT+LA+ I ++ +++Q++ + G +KGNV
Sbjct: 106 YQDIIDKLQAPSQKVTLLFTGPLTDLAKAITVE--PTIVQNIDCLVWMGGTFLDKGNVEE 163
Query: 610 VPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVF 669
AE+N F DP A + VF++ ++I+++ L +V + + + + P F
Sbjct: 164 PEHDGTAEWNAFWDPEAVQIVFDTNIKIEMVALESTNQVPMTWDVRQAWANERHYPGVDF 223
Query: 670 SQRLLQGL--MTLQQSHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKSLEIISDGDIS 727
+ +T Q++ +Y FL +VL +G P L Q + + ++ + ++G +
Sbjct: 224 LGVSYAAVPPLTHFQTNSTY-----FLWDVLTTAYVGM-PELVQQHSV-NVSVHTEG--A 274
Query: 728 KVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEV 760
GQ ++ G+ + +++ + ++ + ++
Sbjct: 275 SQGQTYIDDVNGRPISLVDHVEHDAFFKYITDL 307
Score = 46.2 bits (108), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 106/255 (41%), Gaps = 41/255 (16%)
Query: 1 MMNRDDIP-VGVGGEGGILPNGTILPDVGGYQPII----DQGMSTAG-ECRYRQAIPVGQ 54
++ DDI +GV G + I P V Q II DQ + A + R + P
Sbjct: 21 LIQMDDIELIGVSAIGA---DSYIEPAVSASQKIINRFSDQPIHVAASKERGKHPFPKDW 77
Query: 55 RLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISA--GPITVFVMGSHTNFAIFL 112
R++ L L + +++ L + A Q +I+ + A +T+ G T+ A +
Sbjct: 78 RMHAFFMDAL--PILNEPSNQHSLLLKRPAYQDIIDKLQAPSQKVTLLFTGPLTDLAKAI 135
Query: 113 MNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPF 172
P + +NI+ + MGG GN+ + + AE+N F DP
Sbjct: 136 TVEPTIVQNIDCLVWMGGTFLDK----------------GNVEEPEHDGTAEWNAFWDPE 179
Query: 173 AAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSP 232
A V + I + ++ L++T +P++ ++ RQ + + + + + +++ P
Sbjct: 180 AVQIVFDTNIKIEMVALESTNQVPMT------WDVRQ-AWANERHYPGVDFLGVSYAAVP 232
Query: 233 PF-----HEAYCMWD 242
P + Y +WD
Sbjct: 233 PLTHFQTNSTYFLWD 247
>gi|239636440|ref|ZP_04677442.1| Non-specific ribonucleoside hydrolase RihC [Staphylococcus warneri
L37603]
gi|239597795|gb|EEQ80290.1| Non-specific ribonucleoside hydrolase RihC [Staphylococcus warneri
L37603]
Length = 302
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 78/148 (52%), Gaps = 15/148 (10%)
Query: 547 AVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEKG 605
A++ K++++ E S ITI+ GPLTN+A ++ S I+ + I+GG+ G +G
Sbjct: 104 AIEAMKNVLK--ESTSPITIVAIGPLTNIALLLATYPEIKSKIKQIVIMGGSSG----RG 157
Query: 606 NVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTP 665
NV + AEFN++ DP AA VF S+L + ++ L + R+ + + K++ +T
Sbjct: 158 NV-----TPLAEFNIYCDPEAANIVFNSQLPLVMVGLDLARQAMFSHEFIKKIKTMNQTG 212
Query: 666 ESVFSQRLLQGLMTLQQSHHSYHHVDTF 693
+ +F +L Q T + H D F
Sbjct: 213 DMLF--QLFQHYRT-ENVHEGIKLYDVF 237
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 64/152 (42%), Gaps = 29/152 (19%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
S PIT+ +G TN A+ L P +K I+ I +MGG+ G
Sbjct: 115 STSPITIVAIGPLTNIALLLATYPEIKSKIKQIVIMGGS-----------------SGRG 157
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTY 212
N+ P AEFNI+ DP AA V +S +P+ ++ LD + S F + + T
Sbjct: 158 NV-----TPLAEFNIYCDPEAANIVFNSQLPLVMVGLDLARQAMFSHEFIKKIKTMNQT- 211
Query: 213 EAQYCFQSLKMIRDTWSGSPPFHEAYCMWDSF 244
FQ + R + HE ++D F
Sbjct: 212 -GDMLFQLFQHYR-----TENVHEGIKLYDVF 237
>gi|157370920|ref|YP_001478909.1| inosine/uridine-preferring nucleoside hydrolase [Serratia
proteamaculans 568]
gi|157322684|gb|ABV41781.1| Inosine/uridine-preferring nucleoside hydrolase [Serratia
proteamaculans 568]
Length = 322
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 30/190 (15%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMN 114
+V+ GL +P G Y + + A +I+++ A P IT+ +G TN A+ +
Sbjct: 80 FVHGENGLGDIDIPAG--DYQGIDKRAAHDYIIDSVKAHPGEITLIAVGRLTNLALAVEK 137
Query: 115 NPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAA 174
+P + ++ + +MGGA F + GN+ P+AE NI DP AA
Sbjct: 138 DPGIASLVKEVIIMGGA-----FGHHGHT--------GNV-----TPFAEANIIGDPHAA 179
Query: 175 YTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPF 234
V+ + PVT++ LD T+ +S ++E R + ++ +Q + D F
Sbjct: 180 DRVMTTDWPVTVVGLDVTQQTVMSSE-YIERLRINSARYGEFIYQITRFYAD-------F 231
Query: 235 HEAYCMWDSF 244
H+ D F
Sbjct: 232 HKREIGMDGF 241
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 9/109 (8%)
Query: 554 IVESIE--PGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEKGNVFTV 610
I++S++ PG +IT++ G LTNLA + +S++++V I+GG G GNV
Sbjct: 109 IIDSVKAHPG-EITLIAVGRLTNLALAVEKDPGIASLVKEVIIMGGAFGHHGHTGNV--- 164
Query: 611 PSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLR 659
+ +AE N+ DP AA V + + ++ L + ++ + + +LR
Sbjct: 165 --TPFAEANIIGDPHAADRVMTTDWPVTVVGLDVTQQTVMSSEYIERLR 211
>gi|262044544|ref|ZP_06017600.1| cytidine/uridine-specific hydrolase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259038088|gb|EEW39303.1| cytidine/uridine-specific hydrolase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 311
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 22/100 (22%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
S P+T+ G TN A+ L ++P L I I +MGGA+ +G
Sbjct: 115 SQEPVTLVATGPQTNVALLLASHPELHAKIARIVIMGGAM-----------------GLG 157
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
N P AEFNI+ DP AA V SGIPV + LD T
Sbjct: 158 NW-----QPAAEFNIYVDPQAAEMVFQSGIPVVMAGLDVT 192
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 111/287 (38%), Gaps = 68/287 (23%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + +K + S+ T+ V +L ++ R
Sbjct: 1 MALPIMIDCDPGHDDAIALVLALASPE--MEVKAVTASAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV A G P L RDL
Sbjct: 59 PDIPV------AGGAWKP-----------------------------LMRDL------II 77
Query: 525 AENSVRFGASQDNDDPELRQP-------LAVDVWKSIV-ESIEPGSKITILTNGPLTNLA 576
A+N D P L +P AV++ S++ ES EP +T++ GP TN+A
Sbjct: 78 ADN---VHGESGLDGPSLPEPAFASQNCTAVELMASVLRESQEP---VTLVATGPQTNVA 131
Query: 577 QIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ + I + I+GG G N + AEFN+++DP AA+ VF+S +
Sbjct: 132 LLLASHPELHAKIARIVIMGGAMGLGNWQ---------PAAEFNIYVDPQAAEMVFQSGI 182
Query: 636 EIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQ 682
+ + L + R + + R + P S LL M +
Sbjct: 183 PVVMAGLDVTHRAQILPADIERFR-QIGNPVSTIVAELLDFFMAYHK 228
>gi|163797485|ref|ZP_02191436.1| Inosine-uridine preferring nucleoside hydrolase family protein
[alpha proteobacterium BAL199]
gi|159177234|gb|EDP61793.1| Inosine-uridine preferring nucleoside hydrolase family protein
[alpha proteobacterium BAL199]
Length = 302
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 23/119 (19%)
Query: 88 LINAISAGP-ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSE 146
+I ++A P +++ +G TN A+ L+ P + I + +MGG +
Sbjct: 105 IIEQLAAHPGLSIAAVGPLTNVAVALVKRPDIADRIGKLVIMGGGL-------------- 150
Query: 147 QCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEF 205
+ GN+ P AEFNIF DP AA TV+ +G+ ++PLDAT PV+ + E
Sbjct: 151 ---AFGNV-----TPAAEFNIFVDPEAARTVIEAGLRPVLVPLDATHRAPVTAHAIEEL 201
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 553 SIVESIEPGSKITILTNGPLTNLA-QIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVP 611
+I+E + ++I GPLTN+A ++ + + I + I+GG GNV
Sbjct: 104 AIIEQLAAHPGLSIAAVGPLTNVAVALVKRPDIADRIGKLVIMGGGLA----FGNV---- 155
Query: 612 SSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
+ AEFN+F+DP AA+ V E+ L L+PL R
Sbjct: 156 -TPAAEFNIFVDPEAARTVIEAGLRPVLVPLDATHR 190
>gi|126731383|ref|ZP_01747190.1| inosine-uridine preferring nucleoside hydrolase [Sagittula stellata
E-37]
gi|126708294|gb|EBA07353.1| inosine-uridine preferring nucleoside hydrolase [Sagittula stellata
E-37]
Length = 314
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 66/152 (43%), Gaps = 27/152 (17%)
Query: 44 CRYRQAIPVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI---SAGPITVF 100
C A P+ +V+ GL LP+ P+ A +I+ + +AG +T+
Sbjct: 70 CDAPLARPLVTAEHVHGKTGLDGPVLPE---PTMPVADQHAVDFIIDTLRAEAAGSVTLC 126
Query: 101 VMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSN 160
+G TN A L P + I I +MGGA +GN+
Sbjct: 127 PLGPLTNIATALQKAPDIASRIAEIVLMGGAYFE----------------VGNI-----T 165
Query: 161 PYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
P AEFNI+ DP AA V G P+T++PLD T
Sbjct: 166 PTAEFNIYVDPEAAKLVFACGAPITVMPLDVT 197
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 559 EPGSKITILTNGPLTNLAQIIGLQNS---SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKY 615
E +T+ GPLTN+A LQ + +S I ++ ++GG E GN+ +
Sbjct: 118 EAAGSVTLCPLGPLTNIAT--ALQKAPDIASRIAEIVLMGGAY---FEVGNI-----TPT 167
Query: 616 AEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
AEFN+++DP AAK VF I ++PL + +
Sbjct: 168 AEFNIYVDPEAAKLVFACGAPITVMPLDVTHK 199
>gi|429768351|ref|ZP_19300513.1| putative cytidine/uridine-specific hydrolase [Brevundimonas
diminuta 470-4]
gi|429189224|gb|EKY30065.1| putative cytidine/uridine-specific hydrolase [Brevundimonas
diminuta 470-4]
Length = 316
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 61/133 (45%), Gaps = 24/133 (18%)
Query: 77 APLRQPTAQQVLINAI---SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIR 133
AP+ Q TA ++ + AG + + +MG TN A+ + P L + + VMGGA R
Sbjct: 97 APVAQGTAAGAIVQQVMARPAGSVALAIMGPMTNLALAMQAEPALAARLGPVVVMGGA-R 155
Query: 134 SDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
++ N T S AEFNI++DP AA V SG + ++ LDAT
Sbjct: 156 AEGGNITAS--------------------AEFNIWADPDAAAEVFASGCRMIVMGLDATH 195
Query: 194 TIPVSENFFVEFE 206
+ +E E
Sbjct: 196 QVRATEERIAAIE 208
>gi|425738118|ref|ZP_18856386.1| ribonucleoside hydrolase RihC [Staphylococcus massiliensis S46]
gi|425480603|gb|EKU47768.1| ribonucleoside hydrolase RihC [Staphylococcus massiliensis S46]
Length = 302
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 66/145 (45%), Gaps = 23/145 (15%)
Query: 96 PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY 155
PIT+ +G TN A+ L + +I+ I +MGG+I GN+
Sbjct: 118 PITIIAIGPLTNIALLLQTFGDISDHIKEIILMGGSIVG-----------------GNV- 159
Query: 156 PDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQ 215
PYAEFNI+SDP A+ V SG+P+T++ LD +++ E +R T E
Sbjct: 160 ----TPYAEFNIYSDPEASQIVFKSGLPITMVGLDVAYNSMLNQEDLKELQRMGKTGEML 215
Query: 216 YCFQSLKMIRDTWSGSPPFHEAYCM 240
+ S + D + ++ Y +
Sbjct: 216 FNLLS-RYRSDDFDKGVKIYDVYTL 239
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 61/108 (56%), Gaps = 10/108 (9%)
Query: 564 ITILTNGPLTNLAQII-GLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFL 622
ITI+ GPLTN+A ++ + S I+++ ++GG+ GNV + YAEFN++
Sbjct: 119 ITIIAIGPLTNIALLLQTFGDISDHIKEIILMGGSI----VGGNV-----TPYAEFNIYS 169
Query: 623 DPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFS 670
DP A++ VF+S L I ++ L + + L +L+ KT E +F+
Sbjct: 170 DPEASQIVFKSGLPITMVGLDVAYNSMLNQEDLKELQRMGKTGEMLFN 217
>gi|239617633|ref|YP_002940955.1| Uridine nucleosidase [Kosmotoga olearia TBF 19.5.1]
gi|239506464|gb|ACR79951.1| Uridine nucleosidase [Kosmotoga olearia TBF 19.5.1]
Length = 307
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 78/191 (40%), Gaps = 54/191 (28%)
Query: 2 MNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQRLYVNTN 61
M + D+PV G +L + PD+ G + G+ A +P+ + N
Sbjct: 55 MAKLDVPVFRGSSKPLLRKQIVAPDIHG-----ESGLEGAN-------LPLPTKKAEEKN 102
Query: 62 YGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKKN 121
Y F+ + K+ IT +G TN A F++N PHL
Sbjct: 103 Y---LEFMAETVEKFP-----------------NEITFVAVGPLTNIAKFVLNYPHLVSK 142
Query: 122 IEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSG 181
++ + +MGG I+ GN+ P AEFNI++DP AA V ++G
Sbjct: 143 VKELVIMGGGIK-----------------FGNV-----TPRAEFNIYADPEAAQIVFNAG 180
Query: 182 IPVTIIPLDAT 192
+T+ PLD T
Sbjct: 181 FNLTVFPLDVT 191
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 72/130 (55%), Gaps = 17/130 (13%)
Query: 562 SKITILTNGPLTNLAQ-IIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNM 620
++IT + GPLTN+A+ ++ + S ++++ I+GG + GNV + AEFN+
Sbjct: 116 NEITFVAVGPLTNIAKFVLNYPHLVSKVKELVIMGGGI----KFGNV-----TPRAEFNI 166
Query: 621 FLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTL 680
+ DP AA+ VF + + + PL + + + K + ++++ + S + ++ GL+ L
Sbjct: 167 YADPEAAQIVFNAGFNLTVFPLDVTHQAKIYMKEIKEMQNFR----SEITSKM--GLL-L 219
Query: 681 QQSHHSYHHV 690
+ H +Y+ +
Sbjct: 220 EFFHQTYYDI 229
>gi|386335630|ref|YP_006031800.1| putative ribonucleoside hydrolase [Ralstonia solanacearum Po82]
gi|334198080|gb|AEG71264.1| putative ribonucleoside hydrolase [Ralstonia solanacearum Po82]
Length = 418
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 57/125 (45%), Gaps = 24/125 (19%)
Query: 76 YAPLRQPTAQQVLINAISAG---PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAI 132
+APL Q A LI+ + A +T+ +G TN A L P ++ + I +MGGA
Sbjct: 202 FAPLAQQHAVAYLIDTLRAATPQSVTICALGPLTNLAAALSEAPDIRNGLREIVLMGGAF 261
Query: 133 RSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
F GN+ P AEFNI+ DP AA V SG+P+ ++P D
Sbjct: 262 ----FER------------GNI-----TPVAEFNIYVDPQAAQIVFASGVPIVVLPRDVA 300
Query: 193 KTIPV 197
P+
Sbjct: 301 VKAPI 305
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 9/80 (11%)
Query: 563 KITILTNGPLTNLAQIIG-LQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMF 621
+TI GPLTNLA + + + ++++ ++GG E+GN+ V AEFN++
Sbjct: 225 SVTICALGPLTNLAAALSEAPDIRNGLREIVLMGGAF---FERGNITPV-----AEFNIY 276
Query: 622 LDPLAAKAVFESKLEIKLIP 641
+DP AA+ VF S + I ++P
Sbjct: 277 VDPQAAQIVFASGVPIVVLP 296
>gi|323693092|ref|ZP_08107311.1| hypothetical protein HMPREF9475_02174 [Clostridium symbiosum
WAL-14673]
gi|323502846|gb|EGB18689.1| hypothetical protein HMPREF9475_02174 [Clostridium symbiosum
WAL-14673]
Length = 332
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 52/106 (49%), Gaps = 22/106 (20%)
Query: 95 GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNL 154
G + + +G TN A+ L P LK+ I+ IY MGGA+ GN
Sbjct: 127 GELEIIALGPQTNLALALNVYPELKRMIKCIYFMGGAVEG-----------------GN- 168
Query: 155 YPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSEN 200
S+ AEFNIF DP AA V SGIP+ ++ LD T +S++
Sbjct: 169 ----SSAVAEFNIFFDPEAAKMVFGSGIPLVMVGLDVTLRAVLSDS 210
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 10/93 (10%)
Query: 556 ESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSK 614
++++ ++ I+ GP TNLA + + +I+ +Y +GG E GN SS
Sbjct: 121 QAVQCKGELEIIALGPQTNLALALNVYPELKRMIKCIYFMGGAV----EGGN-----SSA 171
Query: 615 YAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
AEFN+F DP AAK VF S + + ++ L + R
Sbjct: 172 VAEFNIFFDPEAAKMVFGSGIPLVMVGLDVTLR 204
>gi|257056816|ref|YP_003134648.1| Inosine-uridine nucleoside N-ribohydrolase [Saccharomonospora
viridis DSM 43017]
gi|256586688|gb|ACU97821.1| Inosine-uridine nucleoside N-ribohydrolase [Saccharomonospora
viridis DSM 43017]
Length = 320
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 66/149 (44%), Gaps = 26/149 (17%)
Query: 57 YVNTNYGL--RKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMN 114
YV+ GL R A LP+ R P L+ + S P+T+ +G TN A L
Sbjct: 81 YVHGLDGLSGRSAALPEAERPVEPGGAVRLLSRLLES-STEPVTIVPIGPLTNIATLLAA 139
Query: 115 NPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAA 174
P L I + +MGGA+ + GN S+ AEFN++SDP AA
Sbjct: 140 RPDLHHRIARLVIMGGAL-----------------THGN-----SSAAAEFNVWSDPEAA 177
Query: 175 YTVLHSG-IPVTIIPLDATKTIPVSENFF 202
+ VL G +P ++P+D T V +
Sbjct: 178 HRVLTGGEVPCVLVPMDLTYRCAVDREWL 206
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 19/117 (16%)
Query: 540 PELRQPL----AVDVWKSIVES-IEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYI 593
PE +P+ AV + ++ES EP +TI+ GPLTN+A ++ + + I + I
Sbjct: 96 PEAERPVEPGGAVRLLSRLLESSTEP---VTIVPIGPLTNIATLLAARPDLHHRIARLVI 152
Query: 594 VGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFE-SKLEIKLIPLHMQRRVA 649
+GG N SS AEFN++ DP AA V ++ L+P+ + R A
Sbjct: 153 MGGALTHGN---------SSAAAEFNVWSDPEAAHRVLTGGEVPCVLVPMDLTYRCA 200
>gi|323485752|ref|ZP_08091088.1| inosine-uridine nucleoside N-ribohydrolase [Clostridium symbiosum
WAL-14163]
gi|355621566|ref|ZP_09046167.1| hypothetical protein HMPREF1020_00246 [Clostridium sp. 7_3_54FAA]
gi|323400932|gb|EGA93294.1| inosine-uridine nucleoside N-ribohydrolase [Clostridium symbiosum
WAL-14163]
gi|354823373|gb|EHF07704.1| hypothetical protein HMPREF1020_00246 [Clostridium sp. 7_3_54FAA]
Length = 332
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 52/106 (49%), Gaps = 22/106 (20%)
Query: 95 GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNL 154
G + + +G TN A+ L P LK+ I+ IY MGGA+ GN
Sbjct: 127 GELEIIALGPQTNLALALNVYPELKRMIKCIYFMGGAVEG-----------------GN- 168
Query: 155 YPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSEN 200
S+ AEFNIF DP AA V SGIP+ ++ LD T +S++
Sbjct: 169 ----SSAVAEFNIFFDPEAAKIVFGSGIPLVMVGLDVTLRAVLSDS 210
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 10/93 (10%)
Query: 556 ESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSK 614
++++ ++ I+ GP TNLA + + +I+ +Y +GG E GN SS
Sbjct: 121 QAVQCKGELEIIALGPQTNLALALNVYPELKRMIKCIYFMGGAV----EGGN-----SSA 171
Query: 615 YAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
AEFN+F DP AAK VF S + + ++ L + R
Sbjct: 172 VAEFNIFFDPEAAKIVFGSGIPLVMVGLDVTLR 204
>gi|283456759|ref|YP_003361323.1| inosine-uridine preferring nucleoside hydrolase [Bifidobacterium
dentium Bd1]
gi|283103393|gb|ADB10499.1| Inosine-uridine preferring nucleoside hydrolase [Bifidobacterium
dentium Bd1]
Length = 311
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 70/170 (41%), Gaps = 29/170 (17%)
Query: 70 PQGGRKYAPLRQPTAQQVLINAISA--GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYV 127
PQ PL + A Q LI + A G IT+ G TN A+ + P + + I+ I +
Sbjct: 91 PQFDELTKPLEKKHALQYLIETLMASDGDITLVPTGPLTNIAMAMRIEPRICEKIQQIVL 150
Query: 128 MGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTII 187
MGG+ + GN+ P AEFNI++D AA+ V SG+ VT++
Sbjct: 151 MGGSYQH-----------------GNV-----TPSAEFNIWADAEAAHVVFSSGVKVTMM 188
Query: 188 PLDATKTIPVSENFFVEFERRQNTYEAQYC-----FQSLKMIRDTWSGSP 232
LD T+ + + N +C F + W G P
Sbjct: 189 GLDVTRKVLCTPEIVKRMSVHTNNAGRLFCDLMTFFGQAQKRTYGWEGGP 238
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 80/159 (50%), Gaps = 15/159 (9%)
Query: 504 LDSDTLYGLARDLPRSPRRYTAENSVRFGASQDNDD-PELRQPLAVD-VWKSIVESIEPG 561
LD G++R + PR+ E V + D EL +PL + ++E++
Sbjct: 59 LDVPVYQGMSRPMVIEPRQ--GEERVHGKSGLDGPQFDELTKPLEKKHALQYLIETLMAS 116
Query: 562 S-KITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFN 619
IT++ GPLTN+A + ++ IQ + ++GG+ + GNV PS AEFN
Sbjct: 117 DGDITLVPTGPLTNIAMAMRIEPRICEKIQQIVLMGGSY----QHGNV--TPS---AEFN 167
Query: 620 MFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKL 658
++ D AA VF S +++ ++ L + R+V +I+ ++
Sbjct: 168 IWADAEAAHVVFSSGVKVTMMGLDVTRKVLCTPEIVKRM 206
>gi|271501060|ref|YP_003334085.1| Inosine/uridine-preferring nucleoside hydrolase [Dickeya dadantii
Ech586]
gi|270344615|gb|ACZ77380.1| Inosine/uridine-preferring nucleoside hydrolase [Dickeya dadantii
Ech586]
Length = 319
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 21/112 (18%)
Query: 96 PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY 155
PIT +G TN A+ L+ +P + + I + M A ++G+
Sbjct: 122 PITFCAIGPMTNLALALVQHPDVARGIRQVVTMSCAF----------------SALGH-- 163
Query: 156 PDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFER 207
P+AEFN+++DP AA V SGIP+ ++PLD T +++ + +R
Sbjct: 164 ---RMPWAEFNVYADPHAASRVFSSGIPLVVMPLDMTFQALITQQEIAQLQR 212
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 97/236 (41%), Gaps = 45/236 (19%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
++ D D D +AL L P +++ GI V + A + ++ + GR D+P
Sbjct: 6 IIIDTDPGVDDAIALWLALASPE--LDVLGITVVAGNVALEHALANARRIVALSGRIDVP 63
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V G P +G +Y K + +G+ F D+ G + + + E++
Sbjct: 64 VFAG---------ATKPLVGPQRYGKYVHIGA--FSDALVPAGECQAMMQ-------EHA 105
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVI 588
V F + ++ ++ + + IT GP+TNLA + L V
Sbjct: 106 VEF------------------IVRTARQAAQEHNPITFCAIGPMTNLA--LALVQHPDVA 145
Query: 589 QDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHM 644
+ + V + G+ +AEFN++ DP AA VF S + + ++PL M
Sbjct: 146 RGIRQVVTMSCAFSALGH-----RMPWAEFNVYADPHAASRVFSSGIPLVVMPLDM 196
>gi|145299875|ref|YP_001142716.1| inosine-uridine preferring nucleoside hydrolase [Aeromonas
salmonicida subsp. salmonicida A449]
gi|418358089|ref|ZP_12960773.1| inosine-uridine preferring nucleoside hydrolase [Aeromonas
salmonicida subsp. salmonicida 01-B526]
gi|142852647|gb|ABO90968.1| inosine-uridine preferring nucleoside hydrolase [Aeromonas
salmonicida subsp. salmonicida A449]
gi|356688702|gb|EHI53256.1| inosine-uridine preferring nucleoside hydrolase [Aeromonas
salmonicida subsp. salmonicida 01-B526]
Length = 320
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 85/172 (49%), Gaps = 25/172 (14%)
Query: 504 LDSDTLYGLARDLPRSPRRYTAENSVRFGASQDNDDPELRQPLAVDV---WKSIVESIE- 559
+ +D G A L R P +V G S D LA D W+ IV++++
Sbjct: 58 MKADVAQGAAAPLLRDP---VGPTTVVHGPSGFGDVEAGEVSLAPDTRPAWQYIVDAVKA 114
Query: 560 -PGSKITILTNGPLTNLAQIIGLQNS---SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKY 615
PG +IT++T GPLTNLA LQ + + +++ V ++GG G + +GNV + Y
Sbjct: 115 APG-EITLVTIGPLTNLA----LQEAPEITGLVKQVVVMGGAFGVNGHRGNV-----TPY 164
Query: 616 AEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFK--ILHKLRDRKKTP 665
AE N+ DP AA VF + + +I L + ++ SFF L LRD P
Sbjct: 165 AEANIHDDPDAADRVFTANWPVVIIGLDVTQQ--SFFSSGYLDALRDEAGEP 214
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 65/145 (44%), Gaps = 25/145 (17%)
Query: 51 PVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNF 108
PVG V+ G + G AP +P A Q +++A+ A P IT+ +G TN
Sbjct: 74 PVGPTTVVHGPSGFGD--VEAGEVSLAPDTRP-AWQYIVDAVKAAPGEITLVTIGPLTNL 130
Query: 109 AIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIF 168
A L P + ++ + VMGGA N + GN+ PYAE NI
Sbjct: 131 A--LQEAPEITGLVKQVVVMGGAF------GVNGHR-------GNV-----TPYAEANIH 170
Query: 169 SDPFAAYTVLHSGIPVTIIPLDATK 193
DP AA V + PV II LD T+
Sbjct: 171 DDPDAADRVFTANWPVVIIGLDVTQ 195
>gi|377831474|ref|ZP_09814448.1| cytidine/uridine-specific hydrolase [Lactobacillus mucosae LM1]
gi|377554676|gb|EHT16381.1| cytidine/uridine-specific hydrolase [Lactobacillus mucosae LM1]
Length = 312
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 59/125 (47%), Gaps = 32/125 (25%)
Query: 78 PLRQPTAQQVLINAI---------SAGPITVFVMGSHTNFAIFLMNNPHLKK-NIEHIYV 127
PL +P Q V + AI S+ P+T+ V G TN A+FL P L K I+ I
Sbjct: 91 PLPEPDFQPVDLTAIELIAKMLNESSTPVTLVVTGPMTNAALFLRVYPELAKAKIDQIVY 150
Query: 128 MGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTII 187
MGGA+ +GN P EFNIF DP AA V++ GIP+ +
Sbjct: 151 MGGAM-----------------GLGNWQPS-----VEFNIFVDPEAAKIVMNFGIPLVMA 188
Query: 188 PLDAT 192
PL+ T
Sbjct: 189 PLNVT 193
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 116/286 (40%), Gaps = 61/286 (21%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M K ++ D D D LA++ + P I L + S+ T++ +L ++GR
Sbjct: 1 MTKKIILDCDPGHDDALAMMLAVASPK--IELLAVTTSAGNQTPDKTLNNAMRMLKLLGR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGL-ARDLPRSPRRY 523
+DIP+ GG + PL + G + ++ GL LP
Sbjct: 59 EDIPIA-----------------GGNRTPLVKPLETAGEVHGES--GLDGYPLP------ 93
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESI-EPGSKITILTNGPLTNLAQIIGL- 581
+P+ QP+ + + I + + E + +T++ GP+TN A + +
Sbjct: 94 ---------------EPDF-QPVDLTAIELIAKMLNESSTPVTLVVTGPMTNAALFLRVY 137
Query: 582 -QNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLI 640
+ + + I + +GG G N + +V EFN+F+DP AAK V + + +
Sbjct: 138 PELAKAKIDQIVYMGGAMGLGNWQPSV---------EFNIFVDPEAAKIVMNFGIPLVMA 188
Query: 641 PLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHS 686
PL++ + + L+ K F GL++ + +H
Sbjct: 189 PLNVTHQAQILKPEIEALKQIKNPVGQAFY-----GLLSFFERYHE 229
>gi|171742119|ref|ZP_02917926.1| hypothetical protein BIFDEN_01225 [Bifidobacterium dentium ATCC
27678]
gi|171277733|gb|EDT45394.1| pyrimidine-specific ribonucleoside hydrolase RihB [Bifidobacterium
dentium ATCC 27678]
Length = 311
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 70/170 (41%), Gaps = 29/170 (17%)
Query: 70 PQGGRKYAPLRQPTAQQVLINAISA--GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYV 127
PQ PL + A Q LI + A G IT+ G TN A+ + P + + I+ I +
Sbjct: 91 PQFDELTKPLEKKHALQYLIETLMASDGDITLVPTGPLTNIAMAMRIEPRICEKIQQIVL 150
Query: 128 MGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTII 187
MGG+ + GN+ P AEFNI++D AA+ V SG+ VT++
Sbjct: 151 MGGSYQH-----------------GNV-----TPSAEFNIWADAEAAHVVFSSGVKVTMM 188
Query: 188 PLDATKTIPVSENFFVEFERRQNTYEAQYC-----FQSLKMIRDTWSGSP 232
LD T+ + + N +C F + W G P
Sbjct: 189 GLDVTRKVLCTPEIVKRMSVHTNNAGRLFCDLMTFFGQAQKRTYGWEGGP 238
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 81/159 (50%), Gaps = 15/159 (9%)
Query: 504 LDSDTLYGLARDLPRSPRRYTAENSVRFGASQDNDD-PELRQPLAVD-VWKSIVESIEPG 561
LD G++R + PR+ +E V + D EL +PL + ++E++
Sbjct: 59 LDVPVYQGMSRPMVIEPRQ--SEERVHGKSGLDGPQFDELTKPLEKKHALQYLIETLMAS 116
Query: 562 S-KITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFN 619
IT++ GPLTN+A + ++ IQ + ++GG+ + GNV PS AEFN
Sbjct: 117 DGDITLVPTGPLTNIAMAMRIEPRICEKIQQIVLMGGSY----QHGNV--TPS---AEFN 167
Query: 620 MFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKL 658
++ D AA VF S +++ ++ L + R+V +I+ ++
Sbjct: 168 IWADAEAAHVVFSSGVKVTMMGLDVTRKVLCTPEIVKRM 206
>gi|254465714|ref|ZP_05079125.1| pyrimidine-specific ribonucleoside hydrolase RihA [Rhodobacterales
bacterium Y4I]
gi|206686622|gb|EDZ47104.1| pyrimidine-specific ribonucleoside hydrolase RihA [Rhodobacterales
bacterium Y4I]
Length = 313
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 31/179 (17%)
Query: 89 INAISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQC 148
+ A AG +T+ +G TN A P + + ++ I +MGGA
Sbjct: 114 LRAQEAGTVTLCTLGPLTNIAAAFNTAPDIIERVQEIVMMGGAYFE-------------- 159
Query: 149 DSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERR 208
+GN+ P AEFNI++DP AA V +G P+T++PLD T + ++ VE R
Sbjct: 160 --VGNI-----TPAAEFNIYADPEAAEIVFRTGAPITVMPLDVTHKV-LATKPRVEAIRA 211
Query: 209 QNTYEAQYC------FQSLKMIRDTWSGSP---PFHEAYCMWDSFMAGVALSIMLNSSS 258
+T ++ F+ M + G P P A+ + +G +++ + +SS
Sbjct: 212 LDTRVGRFTAEMLDFFERFDMEKYGSEGGPLHDPCVIAWLLKPELFSGRHVNVEIETSS 270
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 15/118 (12%)
Query: 538 DDPEL---RQPLA----VDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQD 590
D P+L + PLA VD S + + E G+ +T+ T GPLTN+A + +I+
Sbjct: 90 DGPKLWEPQMPLAEGHGVDFIISTLRAQEAGT-VTLCTLGPLTNIAA--AFNTAPDIIER 146
Query: 591 VYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
V + G E GN+ + AEFN++ DP AA+ VF + I ++PL + +V
Sbjct: 147 VQEIVMMGGAYFEVGNI-----TPAAEFNIYADPEAAEIVFRTGAPITVMPLDVTHKV 199
>gi|374340349|ref|YP_005097085.1| Inosine-uridine nucleoside N-ribohydrolase [Marinitoga piezophila
KA3]
gi|372101883|gb|AEX85787.1| Inosine-uridine nucleoside N-ribohydrolase [Marinitoga piezophila
KA3]
Length = 306
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 52/113 (46%), Gaps = 22/113 (19%)
Query: 95 GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNL 154
G IT +G TN A F +N P L +E + +MGG I GN+
Sbjct: 116 GKITFVAVGPLTNIAKFALNYPELVSQVEELVIMGGGIE-----------------FGNV 158
Query: 155 YPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFER 207
P AEFNI++DP AA V ++G +T+ PLD T + N E ++
Sbjct: 159 -----KPRAEFNIYADPEAAQIVFNAGFNLTVFPLDVTHQAKIHMNEIKEMQK 206
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 125/289 (43%), Gaps = 63/289 (21%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGIL-VSSTGWATSATVDVVYDLLHMMG 463
M + ++ D D D +A+ LL E I+L GI+ V+ + + T + + +L MG
Sbjct: 1 MKRKIILDCDPGHDDAVAI--LLAGISEKIDLLGIVSVAGNSYVENTTRNAL--ILTEMG 56
Query: 464 RDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRY 523
+ ++PV G + P I G L G +LP ++
Sbjct: 57 KINVPVFQGSAKPLIRDQIVAPDIHG----------------ESGLEG--ANLPLPTKKV 98
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQI-IGLQ 582
+N + F A + ++P KIT + GPLTN+A+ +
Sbjct: 99 EEKNYLEFMAEKVKENP---------------------GKITFVAVGPLTNIAKFALNYP 137
Query: 583 NSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S ++++ I+GG E GNV AEFN++ DP AA+ VF + + + PL
Sbjct: 138 ELVSQVEELVIMGGGI----EFGNV-----KPRAEFNIYADPEAAQIVFNAGFNLTVFPL 188
Query: 643 HMQRRVASFFKI-LHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHV 690
+ + KI ++++++ +K + S+ G++ L+ H +Y+ V
Sbjct: 189 DVTHQA----KIHMNEIKEMQKFSSEIVSK---MGIL-LEFFHQTYYDV 229
>gi|149204023|ref|ZP_01880991.1| inosine-uridine preferring nucleoside hydrolase [Roseovarius sp.
TM1035]
gi|149142465|gb|EDM30510.1| inosine-uridine preferring nucleoside hydrolase [Roseovarius sp.
TM1035]
Length = 313
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 69/149 (46%), Gaps = 31/149 (20%)
Query: 51 PVGQRL----YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP---ITVFVMG 103
P+G+ L +V+ GL LP+ PL+ A LI+ + A P IT+ +G
Sbjct: 72 PLGRALVTAEHVHGRSGLDGPDLPE---PTMPLQDQHAVDFLIDTLRARPAGTITLVPIG 128
Query: 104 SHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYA 163
TN A P + ++ I +MGGA + GN+ P A
Sbjct: 129 PLTNIATAFQRAPDIIARVQEIVLMGGAHAAH----------------GNV-----TPAA 167
Query: 164 EFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
EFNI DP AA VL SG+P+T++PLD T
Sbjct: 168 EFNIHVDPEAAACVLASGVPLTLLPLDVT 196
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 92/246 (37%), Gaps = 60/246 (24%)
Query: 404 LMGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMG 463
+ + ++ D D D +A+++ L P E +L G+ + T + + G
Sbjct: 1 MTARQIIIDTDPGQDDAVAILFALACP-EAFDLLGLTCVAGNVPLDLTTRNARKICELAG 59
Query: 464 RDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRY 523
R D+ V GC PLG
Sbjct: 60 RPDLAV-----------------FAGCDR----PLGRA--------------------LV 78
Query: 524 TAENSVRFGASQDNDDPELRQPL----AVDVWKSIVESIEPGSKITILTNGPLTNLAQII 579
TAE+ D PE PL AVD + + P IT++ GPLTN+A
Sbjct: 79 TAEHVHGRSGLDGPDLPEPTMPLQDQHAVDFLIDTLRA-RPAGTITLVPIGPLTNIAT-- 135
Query: 580 GLQNSSSVI---QDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLE 636
Q + +I Q++ ++GG GNV + AEFN+ +DP AA V S +
Sbjct: 136 AFQRAPDIIARVQEIVLMGGAHAA---HGNV-----TPAAEFNIHVDPEAAACVLASGVP 187
Query: 637 IKLIPL 642
+ L+PL
Sbjct: 188 LTLLPL 193
>gi|150375809|ref|YP_001312405.1| inosine/uridine-preferring nucleoside hydrolase [Sinorhizobium
medicae WSM419]
gi|150030356|gb|ABR62472.1| Inosine/uridine-preferring nucleoside hydrolase [Sinorhizobium
medicae WSM419]
Length = 313
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 54/117 (46%), Gaps = 25/117 (21%)
Query: 96 PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAI--RSDCFNSTNSSQSEQCDSIGN 153
P+ + G TN A+FL+ P LK I+ I +MGGA R++ T
Sbjct: 123 PVVLVPTGPLTNIAMFLLKYPELKHKIDKIVLMGGAFYRRTEYITPT------------- 169
Query: 154 LYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQN 210
EFNIF DP AA VL SG+ + ++ LD T + V E F E + ++
Sbjct: 170 ----------EFNIFCDPEAARIVLDSGLDIIMVGLDVTMHVLVEEEQFAELRKIES 216
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 97/250 (38%), Gaps = 50/250 (20%)
Query: 400 FGKKLMGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLL 459
K + PV+ D D D +AL+ + PV I+L G+ T ++
Sbjct: 1 MSKTVKTIPVLMDCDPGHDDAIALVMAHRSPV--IDLLGVTTVCGNAPPERTTSNALRIM 58
Query: 460 HMMGRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRS 519
+ D+PV A G V P A+ + LG+ D T LP +
Sbjct: 59 QFIDATDVPV------AQGCVTP---------LARPLVLGTA---DGPTGLDGTTYLPEA 100
Query: 520 PRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQ-I 578
+ V F A K + E+ EP + ++ GPLTN+A +
Sbjct: 101 TMPLVPMHGVDFIA------------------KILREAPEP---VVLVPTGPLTNIAMFL 139
Query: 579 IGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIK 638
+ I + ++GG + E + P+ EFN+F DP AA+ V +S L+I
Sbjct: 140 LKYPELKHKIDKIVLMGGAFYRRTE----YITPT----EFNIFCDPEAARIVLDSGLDII 191
Query: 639 LIPLHMQRRV 648
++ L + V
Sbjct: 192 MVGLDVTMHV 201
>gi|421496651|ref|ZP_15943870.1| inosine-uridine preferring nucleoside hydrolase superfamily protein
[Aeromonas media WS]
gi|407184338|gb|EKE58176.1| inosine-uridine preferring nucleoside hydrolase superfamily protein
[Aeromonas media WS]
Length = 322
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 68/120 (56%), Gaps = 13/120 (10%)
Query: 551 WKSIVESIE--PGSKITILTNGPLTNLAQII-GLQNSSSVIQDVYIVGGNKGQDNEKGNV 607
W+ IVE+++ PG +IT++T GPLTNLA + +++++ V ++GG G + +GNV
Sbjct: 105 WQYIVETVKANPG-EITLVTIGPLTNLALALEAAPEITALVKQVVVMGGAFGVNGHRGNV 163
Query: 608 FTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFK--ILHKLRDRKKTP 665
+ YAE N+ DP AA VF + + +I L + ++ SFF L LRD P
Sbjct: 164 -----TPYAEANIHDDPEAADRVFTAPWPVVIIGLDVTQQ--SFFSSAYLDALRDDAGEP 216
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 97/245 (39%), Gaps = 52/245 (21%)
Query: 51 PVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNF 108
PVG V+ GL + G AP +P A Q ++ + A P IT+ +G TN
Sbjct: 74 PVGPTTVVHGPSGLGD--VEAGEVTLAPDPRP-AWQYIVETVKANPGEITLVTIGPLTNL 130
Query: 109 AIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIF 168
A+ L P + ++ + VMGGA N + GN+ PYAE NI
Sbjct: 131 ALALEAAPEITALVKQVVVMGGAF------GVNGHR-------GNV-----TPYAEANIH 172
Query: 169 SDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTW 228
DP AA V + PV II LD T+ Q+ + + Y L +RD
Sbjct: 173 DDPEAADRVFTAPWPVVIIGLDVTQ---------------QSFFSSAY----LDALRDD- 212
Query: 229 SGSPPFHEAYCMWDSFMAGVALSIMLNSSSHNGENACSEMEYMNLTVVTSNEPYGISDGS 288
+G P F+ V+ + S G N C + + V E + + +G
Sbjct: 213 AGEP---------GRFLWAVSRFYLRFYSERIGLNGCHVHDPSAIAYVIDPELFTLREGP 263
Query: 289 NPLID 293
+ID
Sbjct: 264 VRVID 268
>gi|366089134|ref|ZP_09455607.1| ribonucleoside hydrolase RihC [Lactobacillus acidipiscis KCTC
13900]
Length = 306
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 54/122 (44%), Gaps = 24/122 (19%)
Query: 73 GRKYAPLRQPTAQQVLINAISAG--PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGG 130
G Y Q +A + L + I A PIT+ GS+TN A+ P +K I+ I MGG
Sbjct: 94 GTDYGKPIQKSAVEALRDEIMASDEPITLVPTGSYTNIALLFTEYPEVKDRIKEIIAMGG 153
Query: 131 AIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLD 190
+ S AEFN+F+DP AA + SGIP+ ++ LD
Sbjct: 154 TLAKGNMTSA----------------------AEFNVFTDPHAAKIMYDSGIPIVMVGLD 191
Query: 191 AT 192
T
Sbjct: 192 VT 193
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 117/298 (39%), Gaps = 66/298 (22%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M ++ D D D AL + P INLK + + T ++H G+
Sbjct: 1 MAINIIMDTDPGIDDAAALTMAINDP--QINLKLVTAVAGNVTVDKTTANALKIVHFFGK 58
Query: 465 D-DIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSG--GFLDSDTLYGLARDLPRSPR 521
D +IPV G K P I + A I SG G+ D T YG P
Sbjct: 59 DQEIPVAAG---------AKQPLIKPFEDAARIHGESGMPGY-DFGTDYG-------KPI 101
Query: 522 RYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIG- 580
+ +A ++R I+ S EP IT++ G TN+A +
Sbjct: 102 QKSAVEALR---------------------DEIMASDEP---ITLVPTGSYTNIALLFTE 137
Query: 581 LQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLI 640
I+++ +GG KGN+ + AEFN+F DP AAK +++S + I ++
Sbjct: 138 YPEVKDRIKEIIAMGGTLA----KGNM-----TSAAEFNVFTDPHAAKIMYDSGIPIVMV 188
Query: 641 PLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTL----QQSHHSYHHVDTFL 694
L + + + KL +T ++LQ L+T ++ H H V+T
Sbjct: 189 GLDVTLKALLTPATMDKLGTMGRT------GKMLQALVTHYNDGDENGHPMHDVNTIF 240
>gi|407777233|ref|ZP_11124503.1| ribosylpyrimidine nucleosidase [Nitratireductor pacificus pht-3B]
gi|407300933|gb|EKF20055.1| ribosylpyrimidine nucleosidase [Nitratireductor pacificus pht-3B]
Length = 313
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 46/96 (47%), Gaps = 21/96 (21%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
IT+ +G TN A+ L+ P + I I +MGG F N +
Sbjct: 122 ITLCPLGPLTNIALALIREPRIAPRIREIVLMGGGF----FEGGNVT------------- 164
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
P AEFNI+ DP AA VL SG+P+ ++PLD T
Sbjct: 165 ----PAAEFNIYVDPHAAEVVLRSGVPIVMMPLDVT 196
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 75/147 (51%), Gaps = 22/147 (14%)
Query: 538 DDPELRQP-------LAVDVWKSIVESI--EPGSKITILTNGPLTNLA-QIIGLQNSSSV 587
D P+L +P AVD IVE++ +IT+ GPLTN+A +I +
Sbjct: 90 DGPDLPEPRMALQEQCAVDF---IVETLMAHDEDEITLCPLGPLTNIALALIREPRIAPR 146
Query: 588 IQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
I+++ ++GG E GNV + AEFN+++DP AA+ V S + I ++PL + +
Sbjct: 147 IREIVLMGGGF---FEGGNV-----TPAAEFNIYVDPHAAEVVLRSGVPIVMMPLDVTHK 198
Query: 648 VASFFKILHKLRDRKKTPESVFSQRLL 674
+ K + LRD TP + + LL
Sbjct: 199 ALTTRKRVEALRD-IGTPVCLAAAMLL 224
>gi|398944371|ref|ZP_10671234.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas sp.
GM41(2012)]
gi|398158309|gb|EJM46662.1| Inosine-uridine nucleoside N-ribohydrolase [Pseudomonas sp.
GM41(2012)]
Length = 359
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 72/179 (40%), Gaps = 29/179 (16%)
Query: 70 PQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYV 127
P G + LR+ TA Q +++++ A P +T+ +G TN A+ + P + I+ I
Sbjct: 136 PDGLATHTSLRKETAAQFIVDSVRANPHEVTLLAVGPLTNIALAIRTAPDIVPLIKRIVY 195
Query: 128 MGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTII 187
MGGAI P ++ P AEFN + DP AA VL S I I
Sbjct: 196 MGGAIE---------------------IPGNTTPAAEFNWWFDPEAAKIVLRSPIEHVIF 234
Query: 188 PLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPFHEAYCMWDSFMA 246
P D + + + + R Y + + S P +H WDS A
Sbjct: 235 PNDVCEKVTFDASIYQRVIARPGPIADLYTHEFAPLF----SKDPGYHS--FTWDSLPA 287
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 9/135 (6%)
Query: 554 IVESIEPGS-KITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPS 612
IV+S+ ++T+L GPLTN+A + ++ + ++ + + G GN T P+
Sbjct: 154 IVDSVRANPHEVTLLAVGPLTNIA--LAIRTAPDIVPLIKRIVYMGGAIEIPGN--TTPA 209
Query: 613 SKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQR 672
AEFN + DP AAK V S +E + P + +V I ++ R +++
Sbjct: 210 ---AEFNWWFDPEAAKIVLRSPIEHVIFPNDVCEKVTFDASIYQRVIARPGPIADLYTHE 266
Query: 673 LLQGLMTLQQSHHSY 687
L + +HS+
Sbjct: 267 FAP-LFSKDPGYHSF 280
>gi|347539601|ref|YP_004847026.1| inosine/uridine-preferring nucleoside hydrolase [Pseudogulbenkiania
sp. NH8B]
gi|345642779|dbj|BAK76612.1| inosine/uridine-preferring nucleoside hydrolase [Pseudogulbenkiania
sp. NH8B]
Length = 314
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 59/136 (43%), Gaps = 24/136 (17%)
Query: 78 PLRQPTAQQVLINAISAGP---ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
PL+ A +++ + P IT+ +G TN A+ L P + I+ I +MGG+
Sbjct: 100 PLQGKHAVDFIVDTLREAPVGTITLCPVGPLTNIALALAKAPDIAPRIKEIVLMGGSY-- 157
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKT 194
F N S P AEFN+F DP AA VL SG+P+ ++PLD T
Sbjct: 158 --FAGGNIS-----------------PAAEFNVFVDPEAAAIVLRSGVPIVMLPLDVTHQ 198
Query: 195 IPVSENFFVEFERRQN 210
+ S N
Sbjct: 199 VGASAARIARLHALAN 214
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 64/116 (55%), Gaps = 18/116 (15%)
Query: 554 IVESIE--PGSKITILTNGPLTNLAQIIGLQNSSSV---IQDVYIVGGNKGQDNEKGNVF 608
IV+++ P IT+ GPLTN+A + L + + I+++ ++GG+ GN+
Sbjct: 110 IVDTLREAPVGTITLCPVGPLTNIA--LALAKAPDIAPRIKEIVLMGGSY---FAGGNI- 163
Query: 609 TVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV-ASFFKI--LHKLRDR 661
S AEFN+F+DP AA V S + I ++PL + +V AS +I LH L +R
Sbjct: 164 ----SPAAEFNVFVDPEAAAIVLRSGVPIVMLPLDVTHQVGASAARIARLHALANR 215
>gi|334704245|ref|ZP_08520111.1| ribonucleoside hydrolase 1 [Aeromonas caviae Ae398]
Length = 311
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 69/150 (46%), Gaps = 31/150 (20%)
Query: 49 AIPVGQRLYVNTNY----GLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVM 102
A P+ + L + N GL LP +AP R +A +++ + S P+T+
Sbjct: 68 AKPLARELIIADNVHGESGLDGPELPDPA--FAP-RAMSALELMARCLRESPEPVTLVPT 124
Query: 103 GSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPY 162
G TN A+ L +P LK+ I I +MGGA + GN P
Sbjct: 125 GPLTNIALLLAAHPELKQKIARIVLMGGAAGA-----------------GNW-----TPA 162
Query: 163 AEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
AEFNI+ DP AA V SG+P+T+ LD T
Sbjct: 163 AEFNIYVDPEAADMVFKSGLPITMCGLDVT 192
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 105/264 (39%), Gaps = 67/264 (25%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M PV+ D D D +ALI L P + + + S+ T++ +L ++GR
Sbjct: 1 MALPVILDCDPGHDDAIALILALASPE--LKVLAVTTSAGNQTPDKTLNNALRILTLLGR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DDIPV A G P LAR+L
Sbjct: 59 DDIPV------AAGAAKP-----------------------------LAREL------II 77
Query: 525 AENSVRFGASQDNDDPELRQPL-------AVDVW-KSIVESIEPGSKITILTNGPLTNLA 576
A+N D PEL P A+++ + + ES EP +T++ GPLTN+A
Sbjct: 78 ADN---VHGESGLDGPELPDPAFAPRAMSALELMARCLRESPEP---VTLVPTGPLTNIA 131
Query: 577 QIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ I + ++GG G N + AEFN+++DP AA VF+S L
Sbjct: 132 LLLAAHPELKQKIARIVLMGGAAGAGN---------WTPAAEFNIYVDPEAADMVFKSGL 182
Query: 636 EIKLIPLHMQRRVASFFKILHKLR 659
I + L + + + ++R
Sbjct: 183 PITMCGLDVTHEAQVMDEDIERVR 206
>gi|161504175|ref|YP_001571287.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:- str. RSK2980]
gi|189040110|sp|A9MKC6.1|RIHA_SALAR RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|160865522|gb|ABX22145.1| hypothetical protein SARI_02282 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 311
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 64/137 (46%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + S P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPE--PSFAP-QNCTAVELMAKTLRESPQPVTLVATGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHAKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVLMAGLDVT 192
Score = 46.2 bits (108), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 108/257 (42%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPIILDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPDKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + + +D ++G + D P P
Sbjct: 59 SDIPV------AGGAVKPLMREL----------------IIADNVHGESGLDGPALP--- 93
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
E S A Q+ EL K++ ES +P +T++ GP TN+A ++
Sbjct: 94 --EPSF---APQNCTAVELMA-------KTLRESPQP---VTLVATGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+ I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHAKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVLMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHTADIERFR 206
>gi|418576624|ref|ZP_13140757.1| ribonucleoside hydrolase RihC [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|379324781|gb|EHY91926.1| ribonucleoside hydrolase RihC [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
Length = 302
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 57/119 (47%), Gaps = 22/119 (18%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
S PIT+ +G TN A+ L P +K I+ I +MGG+ G
Sbjct: 115 SEDPITLIPIGPLTNIALLLSTYPEVKDYIKEIVLMGGSAAR-----------------G 157
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNT 211
N+ P AEFNI+ DP AA+ V +SG+P+T++ LD ++ +S E + T
Sbjct: 158 NV-----TPLAEFNIYCDPEAAHIVFNSGLPITMVGLDVARSSTLSHATVNELQSLNKT 211
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 64/125 (51%), Gaps = 12/125 (9%)
Query: 541 ELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKG 599
+L AV+ + ++S E IT++ GPLTN+A ++ I+++ ++GG+
Sbjct: 98 DLSSTHAVEAMRKELQSSE--DPITLIPIGPLTNIALLLSTYPEVKDYIKEIVLMGGSAA 155
Query: 600 QDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLR 659
+GNV + AEFN++ DP AA VF S L I ++ L + R +++L+
Sbjct: 156 ----RGNV-----TPLAEFNIYCDPEAAHIVFNSGLPITMVGLDVARSSTLSHATVNELQ 206
Query: 660 DRKKT 664
KT
Sbjct: 207 SLNKT 211
>gi|340793967|ref|YP_004759430.1| inosine-uridine preferring nucleoside hydrolase [Corynebacterium
variabile DSM 44702]
gi|340533877|gb|AEK36357.1| inosine-uridine preferring nucleoside hydrolase [Corynebacterium
variabile DSM 44702]
Length = 328
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 57/130 (43%), Gaps = 22/130 (16%)
Query: 94 AGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGN 153
AG + + +G TN A L+ +P L I + VMGGA
Sbjct: 128 AGELQIIAIGPLTNLAHALVRDPTLVDRIAGVTVMGGAA--------------------- 166
Query: 154 LYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYE 213
L P ++ P AE NI+ DP AA + + PVT++PLD T + E + + Y
Sbjct: 167 LVPGNARPAAEANIWHDPEAAQATVAASWPVTLVPLDTTMEHTLDETYRRRLAEAASPY- 225
Query: 214 AQYCFQSLKM 223
A+ C + L +
Sbjct: 226 ARACGEMLDV 235
>gi|418069697|ref|ZP_12706974.1| inosine-uridine nucleoside N-ribohydrolase [Pediococcus
acidilactici MA18/5M]
gi|357536228|gb|EHJ20259.1| inosine-uridine nucleoside N-ribohydrolase [Pediococcus
acidilactici MA18/5M]
Length = 317
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 108/246 (43%), Gaps = 39/246 (15%)
Query: 9 VGVGGEGGILPNGTILPDVGGYQPIIDQ-GMSTAGECRYRQAIPVGQ-----RL--YVNT 60
VGV G + + P V + IID G + E + PV Q RL +
Sbjct: 30 VGVSAVGA---DSYVEPAVSASRKIIDLFGSPSQLEVAQSDSRPVNQFPKEWRLSAFSFD 86
Query: 61 NYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHL 118
++ + L +G + +QP A ++ + S+ P+T+ + G T+ A L +P +
Sbjct: 87 DFPILNEHLNEGNPQTRLAKQP-AHLDMVQKLQQSSVPVTLVMTGPLTDLARALAVDPTI 145
Query: 119 KKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVL 178
I+ ++ MGG++ + IGN+ + AE+N F DP A TV
Sbjct: 146 TAKIDRLFWMGGSM----------------NGIGNVAEPAHDGSAEWNAFWDPEAVQTVF 189
Query: 179 HSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPF--HE 236
S +P+TI+ LD+T +P++ RQ + Q + +L ++ +S F +
Sbjct: 190 DSDLPITIVSLDSTNQVPLTTAL------RQR-WAKQRQYPALDLVGQGYSLVHSFEANS 242
Query: 237 AYCMWD 242
Y +WD
Sbjct: 243 TYYLWD 248
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 109/223 (48%), Gaps = 26/223 (11%)
Query: 543 RQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS-SSVIQDVYIVGGNKGQD 601
+QP +D+ + + +S P +T++ GPLT+LA+ + + + ++ I ++ +GG+
Sbjct: 106 KQPAHLDMVQKLQQSSVP---VTLVMTGPLTDLARALAVDPTITAKIDRLFWMGGSM--- 159
Query: 602 NEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDR 661
N GNV AE+N F DP A + VF+S L I ++ L +V + LR R
Sbjct: 160 NGIGNVAEPAHDGSAEWNAFWDPEAVQTVFDSDLPITIVSLDSTNQV----PLTTALRQR 215
Query: 662 KKTPESVFSQRLLQGLMTLQQSH---HSYHHVDT-FLGEVLGAVILGGNPHLNQTYKIKS 717
QR L + Q + HS+ T +L +VL +I P L + K +
Sbjct: 216 WA------KQRQYPALDLVGQGYSLVHSFEANSTYYLWDVLTTLI-SKYPELVSS-KPLN 267
Query: 718 LEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEV 760
++++S G IS G+ + G+ V + +N A +YD F ++
Sbjct: 268 VKVVSKG-IS-AGKTYPD-PTGRPVTFVTQVNAAAFYDRFDQL 307
>gi|73663044|ref|YP_301825.1| ribonucleoside hydrolase RihC [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72495559|dbj|BAE18880.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
Length = 302
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 57/119 (47%), Gaps = 22/119 (18%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
S PIT+ +G TN A+ L P +K I+ I +MGG+ G
Sbjct: 115 SEDPITLIPIGPLTNIALLLSTYPEVKDYIKEIVLMGGSAAR-----------------G 157
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNT 211
N+ P AEFNI+ DP AA+ V +SG+P+T++ LD ++ +S E + T
Sbjct: 158 NV-----TPLAEFNIYCDPEAAHIVFNSGLPITMVGLDVARSSTLSHATVNELQSLNKT 211
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 64/125 (51%), Gaps = 12/125 (9%)
Query: 541 ELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKG 599
+L AV+ + ++S E IT++ GPLTN+A ++ I+++ ++GG+
Sbjct: 98 DLSSTHAVEAMRKELQSSE--DPITLIPIGPLTNIALLLSTYPEVKDYIKEIVLMGGSAA 155
Query: 600 QDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLR 659
+GNV + AEFN++ DP AA VF S L I ++ L + R +++L+
Sbjct: 156 ----RGNV-----TPLAEFNIYCDPEAAHIVFNSGLPITMVGLDVARSSTLSHATVNELQ 206
Query: 660 DRKKT 664
KT
Sbjct: 207 SLNKT 211
>gi|297182793|gb|ADI18946.1| inosine-uridine nucleoside N-ribohydrolase [uncultured
Rhodobacterales bacterium HF0010_10C01]
Length = 313
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 52/111 (46%), Gaps = 21/111 (18%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
IT+ +G TN A L + L ++IE I +MGG F N +
Sbjct: 120 ITICALGPLTNVAKVLKKDSVLTESIEEIVLMGGGF----FEGGNIT------------- 162
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFER 207
P AEFNI+ DP AA VL SG+ +T++PLD T V NF + +
Sbjct: 163 ----PAAEFNIYVDPEAAKIVLESGLKITMLPLDVTHKTLVQRNFLEKLRK 209
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 68/126 (53%), Gaps = 14/126 (11%)
Query: 541 ELRQPLAVDVWKSIVESIEP--GSKITILTNGPLTNLAQIIGLQNS-SSVIQDVYIVGGN 597
EL + AVD I+E E KITI GPLTN+A+++ + + I+++ ++GG
Sbjct: 98 ELERTDAVDF---IIECTEKYRDEKITICALGPLTNVAKVLKKDSVLTESIEEIVLMGGG 154
Query: 598 KGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHK 657
E GN+ + AEFN+++DP AAK V ES L+I ++PL + + L K
Sbjct: 155 FF---EGGNI-----TPAAEFNIYVDPEAAKIVLESGLKITMLPLDVTHKTLVQRNFLEK 206
Query: 658 LRDRKK 663
LR K
Sbjct: 207 LRKSGK 212
>gi|294637499|ref|ZP_06715785.1| cytidine/uridine-specific hydrolase [Edwardsiella tarda ATCC 23685]
gi|451966040|ref|ZP_21919295.1| pyrimidine-specific ribonucleoside hydrolase RihA [Edwardsiella
tarda NBRC 105688]
gi|291089331|gb|EFE21892.1| cytidine/uridine-specific hydrolase [Edwardsiella tarda ATCC 23685]
gi|451315289|dbj|GAC64657.1| pyrimidine-specific ribonucleoside hydrolase RihA [Edwardsiella
tarda NBRC 105688]
Length = 319
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 63/137 (45%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ G +AP R A ++ + + P+T+ G TN A+ L +
Sbjct: 81 VHGESGLDGPDLPEPG--FAP-RPEGALALMAQTLRTTTQPLTLVATGPLTNVALLLATH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P LK IE I +MGG+ + GN P AEFNI+ DP AA
Sbjct: 138 PELKPRIERIVIMGGSAGA-----------------GNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SG+P+ + LD T
Sbjct: 176 MVFQSGVPIVMAGLDVT 192
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 105/260 (40%), Gaps = 59/260 (22%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +ALI L P ++++ + S+ T+ +L ++ R
Sbjct: 1 MTLPLIIDCDPGHDDAIALILALASPE--LDVRAVTTSAGNQTPDKTLRNALRILTLLRR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA----RDLPRSP 520
DIPV A G P + + +D ++G + DLP
Sbjct: 59 SDIPV------AAGAAKPLLREL----------------IIADNVHGESGLDGPDLPEPG 96
Query: 521 RRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIG 580
E ++ A +++ + +P +T++ GPLTN+A ++
Sbjct: 97 FAPRPEGALALMA------------------QTLRTTTQP---LTLVATGPLTNVALLLA 135
Query: 581 LQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKL 639
I+ + I+GG+ G N + AEFN+++DP AA+ VF+S + I +
Sbjct: 136 THPELKPRIERIVIMGGSAGAGN---------WTPAAEFNIYVDPEAAEMVFQSGVPIVM 186
Query: 640 IPLHMQRRVASFFKILHKLR 659
L + R + +LR
Sbjct: 187 AGLDVTHRAQILDADIERLR 206
>gi|116617908|ref|YP_818279.1| ribonucleoside hydrolase RihC [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|116096755|gb|ABJ61906.1| Inosine-uridine nucleoside N-ribohydrolase [Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293]
Length = 310
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 23/136 (16%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNP 116
Y++ G+ PQ ++ L TA + A S P+T+ GS+TN A+ + P
Sbjct: 79 YIHGESGMPGYDFPQVTKEAIKLDAITAMAEELEA-SIVPMTIVATGSYTNIAMLIQKYP 137
Query: 117 HLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYT 176
L IE +MGG++ S GN+ + AEFN+F+DP AA
Sbjct: 138 SLLHKIEKFVLMGGSL-----------------SGGNV-----SSVAEFNVFTDPDAADI 175
Query: 177 VLHSGIPVTIIPLDAT 192
V SG+P+ ++ LD T
Sbjct: 176 VFKSGVPIVMVGLDVT 191
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 73/155 (47%), Gaps = 17/155 (10%)
Query: 543 RQPLAVDVWKSIVESIEPG-SKITILTNGPLTNLAQIIGLQNSSSV---IQDVYIVGGNK 598
++ + +D ++ E +E +TI+ G TN+A +I Q S+ I+ ++GG+
Sbjct: 96 KEAIKLDAITAMAEELEASIVPMTIVATGSYTNIAMLI--QKYPSLLHKIEKFVLMGGSL 153
Query: 599 GQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKL 658
GNV S AEFN+F DP AA VF+S + I ++ L + + F+ + +
Sbjct: 154 ----SGGNV-----SSVAEFNVFTDPDAADIVFKSGVPIVMVGLDVTLKALLPFETIDAI 204
Query: 659 RDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTF 693
+ + E + Q+++ + H V+T
Sbjct: 205 GSQGEAGEML--QKVMTAYGDTAEGGKPMHDVNTI 237
>gi|333892575|ref|YP_004466450.1| inosine/uridine-preferring nucleoside hydrolase [Alteromonas sp.
SN2]
gi|332992593|gb|AEF02648.1| inosine/uridine-preferring nucleoside hydrolase [Alteromonas sp.
SN2]
Length = 320
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 20/131 (15%)
Query: 84 AQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTN 141
A +I + A P IT+ +G TN A+ L P + ++ + +MGGA F
Sbjct: 104 AHDYIIEKVKASPGEITLVAVGRMTNLALALRKCPEIINLVKRVVIMGGA-----FGYHG 158
Query: 142 SSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENF 201
++ GN+ PYAE NI DP AA VL + PVT++ LD TK + +S ++
Sbjct: 159 NT--------GNV-----TPYAEANIIGDPHAADEVLTADWPVTVVGLDVTKKVIMSNDY 205
Query: 202 FVEFERRQNTY 212
TY
Sbjct: 206 LARLAECSPTY 216
>gi|433773174|ref|YP_007303641.1| Inosine-uridine nucleoside N-ribohydrolase [Mesorhizobium
australicum WSM2073]
gi|433665189|gb|AGB44265.1| Inosine-uridine nucleoside N-ribohydrolase [Mesorhizobium
australicum WSM2073]
Length = 314
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 48/100 (48%), Gaps = 21/100 (21%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
+G IT+ +G TN A+ L+ P + I+ I +MGG F N +
Sbjct: 118 ESGTITLCPLGPLTNVALALIREPRIAPRIKEIVLMGGGF----FEGGNVT--------- 164
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
P AEFNI+ DP AA V SGIP+ ++PLD T
Sbjct: 165 --------PTAEFNIYVDPHAADVVFRSGIPIVMMPLDVT 196
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 14/122 (11%)
Query: 541 ELRQPLAVDVWKSIVESI--EPGSKITILTNGPLTNLA-QIIGLQNSSSVIQDVYIVGGN 597
+L+ AVD IVE++ E IT+ GPLTN+A +I + I+++ ++GG
Sbjct: 100 KLQDQYAVDF---IVETLMKEESGTITLCPLGPLTNVALALIREPRIAPRIKEIVLMGGG 156
Query: 598 KGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHK 657
E GNV + AEFN+++DP AA VF S + I ++PL + + + K +
Sbjct: 157 F---FEGGNV-----TPTAEFNIYVDPHAADVVFRSGIPIVMMPLDVTHKALTTSKRIEA 208
Query: 658 LR 659
R
Sbjct: 209 FR 210
>gi|339021234|ref|ZP_08645342.1| inosine-uridine preferring nucleoside hydrolase [Acetobacter
tropicalis NBRC 101654]
gi|338751672|dbj|GAA08646.1| inosine-uridine preferring nucleoside hydrolase [Acetobacter
tropicalis NBRC 101654]
Length = 313
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 30/125 (24%)
Query: 88 LINAISAGP---ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQ 144
L+ ++A P IT+ +G TN A L+ P ++ + MGGA
Sbjct: 109 LLETLAAHPANSITLVTIGPMTNLATALIQAPETVGRLKQVVAMGGA------------- 155
Query: 145 SEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVE 204
GN+ P AEFN F+DP AA VL+SG+P+T++PLD ++ +F +
Sbjct: 156 ---WSETGNI-----TPAAEFNAFADPDAAAIVLNSGLPLTLVPLD------ITHSFLIT 201
Query: 205 FERRQ 209
+R +
Sbjct: 202 PDRLE 206
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 11/90 (12%)
Query: 557 SIEPGSKITILTNGPLTNLAQIIGLQNSSSV--IQDVYIVGGNKGQDNEKGNVFTVPSSK 614
+ P + IT++T GP+TNLA + +Q +V ++ V +GG +E GN+ +
Sbjct: 114 AAHPANSITLVTIGPMTNLATAL-IQAPETVGRLKQVVAMGGAW---SETGNI-----TP 164
Query: 615 YAEFNMFLDPLAAKAVFESKLEIKLIPLHM 644
AEFN F DP AA V S L + L+PL +
Sbjct: 165 AAEFNAFADPDAAAIVLNSGLPLTLVPLDI 194
>gi|432562534|ref|ZP_19799161.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE51]
gi|431099767|gb|ELE04787.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE51]
Length = 311
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 64/137 (46%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPE--PTFAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + D T
Sbjct: 176 IVFQSGIPVVMAGPDVT 192
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 100/237 (42%), Gaps = 53/237 (22%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAVKPLM----------------RELIIADNVHGESGLDGPALPEPT 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVELMA-------KTLRESAEP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKL 639
S I + I+GG G N + AEFN+++DP AA+ VF+S + + +
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVM 186
>gi|157374261|ref|YP_001472861.1| inosine/uridine-preferring nucleoside hydrolase [Shewanella
sediminis HAW-EB3]
gi|157316635|gb|ABV35733.1| inosine/uridine-preferring nucleoside hydrolase [Shewanella
sediminis HAW-EB3]
Length = 324
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 65/145 (44%), Gaps = 22/145 (15%)
Query: 51 PVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNF 108
PVG + V+ G +P A R A Q +I+A+ A P IT+ +G TN
Sbjct: 74 PVGPTVVVHGESGFGDVEVPAEVEGEADAR--PAYQYIIDAVKAEPKEITLVAIGPLTNL 131
Query: 109 AIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIF 168
A+ L P + ++ + +MGGA + D GN+ PYAE NI
Sbjct: 132 ALALQAEPEIVNLVKEVVIMGGAFGVN-------------DHRGNV-----TPYAEANIH 173
Query: 169 SDPFAAYTVLHSGIPVTIIPLDATK 193
DP AA V + PV II LD T+
Sbjct: 174 DDPHAADIVFSASWPVVIIGLDVTE 198
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 65/115 (56%), Gaps = 15/115 (13%)
Query: 551 WKSIVESIEPGSK-ITILTNGPLTNLAQIIGLQNSSSVI---QDVYIVGGNKGQDNEKGN 606
++ I+++++ K IT++ GPLTNLA + LQ ++ ++V I+GG G ++ +GN
Sbjct: 106 YQYIIDAVKAEPKEITLVAIGPLTNLA--LALQAEPEIVNLVKEVVIMGGAFGVNDHRGN 163
Query: 607 VFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFK--ILHKLR 659
V + YAE N+ DP AA VF + + +I L + + SFF L KLR
Sbjct: 164 V-----TPYAEANIHDDPHAADIVFSASWPVVIIGLDVTEQ--SFFTGDYLDKLR 211
>gi|418314773|ref|ZP_12926241.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus 21340]
gi|365244895|gb|EHM85548.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus 21340]
Length = 311
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 72/173 (41%), Gaps = 34/173 (19%)
Query: 78 PLRQPTA---QQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAI 132
P RQ A V+IN + S P+T+ G TN A L+ P + ++IE I +MGG
Sbjct: 97 PSRQAVAMPASDVIINKVMTSDTPVTIVATGPLTNVATALIREPRIAEHIESITLMGGG- 155
Query: 133 RSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
+ GN P AEFNI+ D A V SGI + + LD T
Sbjct: 156 -----------------TFGNW-----TPTAEFNIWVDAEGAKRVFESGITINVFGLDVT 193
Query: 193 KTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWS-----GSPPFHEAYCM 240
+ ++ FE N AQ+ + L+ + T+ P H+A +
Sbjct: 194 HQVLADDHVIERFESINNPV-AQFVVELLQFFKKTYKTHFNMDGGPIHDACTI 245
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 113/283 (39%), Gaps = 55/283 (19%)
Query: 405 MGKPVVFDIDMSAGDFLALIYL--LKLPVELINLKGILVSSTGWATSATVDVVYDLLHMM 462
M + ++ D D D +ALI + P+E++ + + + + ++L +M
Sbjct: 1 MKRKIIMDCDPGHDDAIALILAGAIDSPLEILAVTTV---AGNQSVDKNTTNALNVLDIM 57
Query: 463 GRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRR 522
GR DI V G P I +A I SG LD LP +P R
Sbjct: 58 GRQDIAVAKG---------ADRPLIKPAAFASEIHGESG--LD-------GPKLPSTPSR 99
Query: 523 YTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQ-IIGL 581
+ P + + ++ S P +TI+ GPLTN+A +I
Sbjct: 100 QA-----------------VAMPASDVIINKVMTSDTP---VTIVATGPLTNVATALIRE 139
Query: 582 QNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
+ I+ + ++GG GN + AEFN+++D AK VFES + I +
Sbjct: 140 PRIAEHIESITLMGGGT-----FGN-----WTPTAEFNIWVDAEGAKRVFESGITINVFG 189
Query: 642 LHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSH 684
L + +V + ++ + + P + F LLQ ++H
Sbjct: 190 LDVTHQVLADDHVIERF-ESINNPVAQFVVELLQFFKKTYKTH 231
>gi|358051368|ref|ZP_09145578.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
simiae CCM 7213]
gi|357259188|gb|EHJ09035.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
simiae CCM 7213]
Length = 313
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 107/221 (48%), Gaps = 27/221 (12%)
Query: 549 DVWKSIVESIEPG-SKITILTNGPLTNLAQIIGLQNS-SSVIQDVYIVGGNKGQDNEKGN 606
+ ++ I+++++ +K+T+L GPLT+LA+ + + ++ + I+ + +GG +KGN
Sbjct: 106 EAYQDIIDTVKTNPNKVTLLFTGPLTDLAKALTIDDTITENIEKLVWMGGTFL---DKGN 162
Query: 607 VFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPE 666
V AE+N F DP A K VFES + I +I L +V + + +
Sbjct: 163 VEEPEHDGTAEWNAFWDPEAVKTVFESDIAIDMIALESTNQVPLTLDVRQRWAN------ 216
Query: 667 SVFSQRLLQGLMTLQQSH-------HSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKSLE 719
+R +G+ L S+ H + FL +VL + G P L Q Y+ K ++
Sbjct: 217 ----ERQYEGVDFLGVSYAAVPPLTHFVTNSTYFLWDVLTTAYV-GKPELVQ-YEHKFVD 270
Query: 720 IISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEV 760
+IS G G+ QG+ V V+ ++ ++D+ ++
Sbjct: 271 VISHG--PSQGRTF-EVSQGRPVNVINHVDRTSFFDYITDL 308
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 30/166 (18%)
Query: 84 AQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTN 141
A Q +I+ + P +T+ G T+ A L + + +NIE + MGG
Sbjct: 107 AYQDIIDTVKTNPNKVTLLFTGPLTDLAKALTIDDTITENIEKLVWMGGTFLDK------ 160
Query: 142 SSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENF 201
GN+ + + AE+N F DP A TV S I + +I L++T +P++ +
Sbjct: 161 ----------GNVEEPEHDGTAEWNAFWDPEAVKTVFESDIAIDMIALESTNQVPLTLDV 210
Query: 202 FVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPF-----HEAYCMWD 242
R++ E QY + + + +++ PP + Y +WD
Sbjct: 211 -----RQRWANERQY--EGVDFLGVSYAAVPPLTHFVTNSTYFLWD 249
>gi|334703879|ref|ZP_08519745.1| inosine-uridine preferring nucleoside hydrolase superfamily protein
[Aeromonas caviae Ae398]
Length = 323
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 66/118 (55%), Gaps = 9/118 (7%)
Query: 551 WKSIVESIE--PGSKITILTNGPLTNLAQII-GLQNSSSVIQDVYIVGGNKGQDNEKGNV 607
W+ IVE+++ PG +IT++T GPLTNLA + ++++++V ++GG G + +GNV
Sbjct: 105 WQYIVETVKAHPG-EITLVTIGPLTNLALALEAAPEVAALVKEVVVMGGAFGVNGHRGNV 163
Query: 608 FTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTP 665
+ YAE N+ DP AA VF + + +I L + ++ L LRD P
Sbjct: 164 -----TPYAEANIHDDPDAADRVFTAPWPLVIIGLDVTQQSIFTADYLDALRDDAGEP 216
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 20/112 (17%)
Query: 84 AQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTN 141
A Q ++ + A P IT+ +G TN A+ L P + ++ + VMGGA N
Sbjct: 104 AWQYIVETVKAHPGEITLVTIGPLTNLALALEAAPEVAALVKEVVVMGGAF------GVN 157
Query: 142 SSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
+ GN+ PYAE NI DP AA V + P+ II LD T+
Sbjct: 158 GHR-------GNV-----TPYAEANIHDDPDAADRVFTAPWPLVIIGLDVTQ 197
>gi|260774185|ref|ZP_05883100.1| inosine-uridine preferring nucleoside hydrolase [Vibrio
metschnikovii CIP 69.14]
gi|260611146|gb|EEX36350.1| inosine-uridine preferring nucleoside hydrolase [Vibrio
metschnikovii CIP 69.14]
Length = 317
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 107/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M +P++ D D D +ALI P + +K + S+ T++ +L ++GR
Sbjct: 1 MTRPIILDCDPGHDDAIALILACASPS--LAIKAVTTSAGNQTPEKTLNNALRILTLLGR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYG-LARDLPRSPRRY 523
DIPV A G + P + +D ++G D P P
Sbjct: 59 SDIPV------AGGALKPLM----------------RELIIADNVHGETGLDGPTLPDPS 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A + AV++ +I+ E +T++ GPLTN+A ++
Sbjct: 97 FAPQTEH----------------AVELMANILRQSE--QHVTLVPTGPLTNIALLLATHR 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
IQ++ ++GG E GN S AEFN+++DP AAK VF+S + I + L
Sbjct: 139 ELIPKIQEIVLMGGGA----ETGN-----WSPAAEFNIYVDPEAAKLVFQSGIPITMCGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ R + + ++R
Sbjct: 190 DVTHRAQIMDEDIERIR 206
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 44/96 (45%), Gaps = 22/96 (22%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
+T+ G TN A+ L + L I+ I +MGG + GN
Sbjct: 119 VTLVPTGPLTNIALLLATHRELIPKIQEIVLMGGGAET-----------------GNW-- 159
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
+P AEFNI+ DP AA V SGIP+T+ LD T
Sbjct: 160 ---SPAAEFNIYVDPEAAKLVFQSGIPITMCGLDVT 192
>gi|160879959|ref|YP_001558927.1| ribonucleoside hydrolase RihC [Clostridium phytofermentans ISDg]
gi|160428625|gb|ABX42188.1| Inosine/uridine-preferring nucleoside hydrolase [Clostridium
phytofermentans ISDg]
Length = 306
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 74/174 (42%), Gaps = 38/174 (21%)
Query: 79 LRQPTAQQVLINAISA---------GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMG 129
PT + NA++A PIT+ +G TN A+ L P +K+NI+ + +MG
Sbjct: 93 FEDPTCTPITENAVNAMRRIITESKEPITIVAIGPLTNVALLLKVYPEVKENIKEVVMMG 152
Query: 130 GAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPL 189
G++ S GN+ +EFN+ DP AAY + HSG+ + ++ L
Sbjct: 153 GSL-----------------SRGNM-----GVMSEFNVGVDPEAAYILFHSGVDIAMVGL 190
Query: 190 DATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPFHEAYCMWDS 243
D V E + T E YC + + GS F+ M+DS
Sbjct: 191 DIGLKALVLPEDSEEIKTMNKTGEMAYC-----LFKKYRGGS--FNTGLKMYDS 237
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 67/126 (53%), Gaps = 14/126 (11%)
Query: 547 AVDVWKSIV-ESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEK 604
AV+ + I+ ES EP ITI+ GPLTN+A ++ + I++V ++GG+ +
Sbjct: 105 AVNAMRRIITESKEP---ITIVAIGPLTNVALLLKVYPEVKENIKEVVMMGGSLS----R 157
Query: 605 GNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKT 664
GN+ + +EFN+ +DP AA +F S ++I ++ L + + + +++ KT
Sbjct: 158 GNMGVM-----SEFNVGVDPEAAYILFHSGVDIAMVGLDIGLKALVLPEDSEEIKTMNKT 212
Query: 665 PESVFS 670
E +
Sbjct: 213 GEMAYC 218
>gi|257457279|ref|ZP_05622450.1| pyrimidine-specific ribonucleoside hydrolase RihA [Treponema
vincentii ATCC 35580]
gi|257445201|gb|EEV20273.1| pyrimidine-specific ribonucleoside hydrolase RihA [Treponema
vincentii ATCC 35580]
Length = 311
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 48/101 (47%), Gaps = 22/101 (21%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
S P+T V G TN AI L+ P +KKN++ I +MGG I ++S
Sbjct: 116 SPEPVTFVVTGPLTNLAILLLAYPEVKKNLKQICLMGGGIDHGNWSSA------------ 163
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
AEFNI DP AA+ V G+P+ + LD T+
Sbjct: 164 ----------AEFNILVDPEAAHIVFSCGVPIVMCGLDVTE 194
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 13/123 (10%)
Query: 552 KSIVESIEPGSKITILTNGPLTNLA-QIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTV 610
+ I ES EP +T + GPLTNLA ++ ++ + ++GG N
Sbjct: 111 RLICESPEP---VTFVVTGPLTNLAILLLAYPEVKKNLKQICLMGGGIDHGN-------- 159
Query: 611 PSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFS 670
S AEFN+ +DP AA VF + I + L + + F + + LR K + +
Sbjct: 160 -WSSAAEFNILVDPEAAHIVFSCGVPIVMCGLDVTEKAMIFSEEIESLRKSGKRVAVLVA 218
Query: 671 QRL 673
Q L
Sbjct: 219 QLL 221
>gi|423202283|ref|ZP_17188862.1| pyrimidine-specific ribonucleoside hydrolase rihA [Aeromonas
veronii AER39]
gi|404615435|gb|EKB12407.1| pyrimidine-specific ribonucleoside hydrolase rihA [Aeromonas
veronii AER39]
Length = 311
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 56/130 (43%), Gaps = 26/130 (20%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
S P+T+ G TN A+ L +P LK I I +MGGA + G
Sbjct: 115 SPEPVTLVPTGPLTNIALLLAAHPELKPKIARIVLMGGAAGA-----------------G 157
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFER-RQNT 211
N P AEFNI+ DP AA V SGIP+T+ LD T V + + ER R T
Sbjct: 158 NW-----TPAAEFNIYVDPEAADMVFKSGIPITMCGLDVTHEAQVMDE---DIERVRAIT 209
Query: 212 YEAQYCFQSL 221
C L
Sbjct: 210 NPVAQCVAGL 219
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 105/257 (40%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M PV+ D D D +ALI L P + + + S+ T++ +L ++GR
Sbjct: 1 MALPVILDCDPGHDDAIALILALASPE--LEVLAVTTSAGNQTPDKTLNNALRILTLLGR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DDIPV G PK PL + +D ++G + D P+ P
Sbjct: 59 DDIPVAAG--------APK-------------PLARE-LIIADNVHGESGLDGPKLPDPA 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q EL + + ES EP +T++ GPLTN+A ++
Sbjct: 97 FA--------PQGMTGIELMA-------RCLRESPEP---VTLVPTGPLTNIALLLAAHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
I + ++GG G N + AEFN+++DP AA VF+S + I + L
Sbjct: 139 ELKPKIARIVLMGGAAGAGN---------WTPAAEFNIYVDPEAADMVFKSGIPITMCGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + ++R
Sbjct: 190 DVTHEAQVMDEDIERVR 206
>gi|392529627|ref|ZP_10276764.1| ribonucleoside hydrolase RihC [Carnobacterium maltaromaticum ATCC
35586]
Length = 304
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 24/113 (21%)
Query: 84 AQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTN 141
A + L I A P IT+ + + TN A+ P +K+NIE I +MGG +
Sbjct: 104 AVEALKKYILASPEKITLVPIAALTNIALLFTMYPEVKENIEEIVMMGGTL--------- 154
Query: 142 SSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKT 194
S GN +N AEFN + DP AA V +G+P+T++ LD T T
Sbjct: 155 --------SRGN-----TNSIAEFNTYVDPHAAQMVFQAGVPITMVGLDVTDT 194
>gi|417950530|ref|ZP_12593650.1| hypothetical protein VISP3789_01479 [Vibrio splendidus ATCC 33789]
gi|342806313|gb|EGU41541.1| hypothetical protein VISP3789_01479 [Vibrio splendidus ATCC 33789]
Length = 322
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 72/154 (46%), Gaps = 27/154 (17%)
Query: 51 PVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNF 108
PVG + V+ G P + + +P A Q +I+++ A P IT+ +G TN
Sbjct: 74 PVGATVVVHGEAGFGDVKAPNS-LDVSAIEKP-AYQFIIDSVRAAPGEITLVAVGPLTNL 131
Query: 109 AIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIF 168
A+ L P + + ++ + +MGGA + D GN+ P+AE NI
Sbjct: 132 AVALEAAPDIVELVKEVVIMGGAFGEN-------------DHRGNV-----TPFAEANIH 173
Query: 169 SDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFF 202
DP AA V + PVT+I LD T+ E+FF
Sbjct: 174 DDPHAADKVFTASWPVTVIGLDVTE-----ESFF 202
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 77/134 (57%), Gaps = 24/134 (17%)
Query: 541 ELRQPLAVDV-------WKSIVESIE--PGSKITILTNGPLTNLAQIIGLQNSSSVIQ-- 589
+++ P ++DV ++ I++S+ PG +IT++ GPLTNLA + L+ + +++
Sbjct: 89 DVKAPNSLDVSAIEKPAYQFIIDSVRAAPG-EITLVAVGPLTNLA--VALEAAPDIVELV 145
Query: 590 -DVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
+V I+GG G+++ +GNV + +AE N+ DP AA VF + + +I L +
Sbjct: 146 KEVVIMGGAFGENDHRGNV-----TPFAEANIHDDPHAADKVFTASWPVTVIGLDVTEE- 199
Query: 649 ASFF--KILHKLRD 660
SFF + L +LRD
Sbjct: 200 -SFFTAQYLDELRD 212
>gi|414083415|ref|YP_006992123.1| inosine-uridine preferring nucleoside hydrolase family protein
[Carnobacterium maltaromaticum LMA28]
gi|412996999|emb|CCO10808.1| inosine-uridine preferring nucleoside hydrolase family protein
[Carnobacterium maltaromaticum LMA28]
Length = 304
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 24/113 (21%)
Query: 84 AQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTN 141
A + L I A P IT+ + + TN A+ P +K+NIE I +MGG +
Sbjct: 104 AVEALKKYILASPEKITLVPIAALTNIALLFTMYPEVKENIEEIVMMGGTL--------- 154
Query: 142 SSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKT 194
S GN +N AEFN + DP AA V +G+P+T++ LD T T
Sbjct: 155 --------SRGN-----TNSIAEFNTYVDPHAAQMVFQAGVPITMVGLDVTDT 194
>gi|84387144|ref|ZP_00990166.1| hypothetical inosine-uridine preferring nucleoside hydrolase
[Vibrio splendidus 12B01]
gi|84378005|gb|EAP94866.1| hypothetical inosine-uridine preferring nucleoside hydrolase
[Vibrio splendidus 12B01]
Length = 322
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 70/154 (45%), Gaps = 27/154 (17%)
Query: 51 PVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNF 108
PVG + V+ GL P Y +++P A Q +I+++ A P IT+ +G TN
Sbjct: 74 PVGATVVVHGETGLGDVTAPSS-LDYEAIKKP-AYQFIIDSVRAEPKEITLVAVGPLTNL 131
Query: 109 AIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIF 168
A+ L P + ++ + VMGGA GN+ P+AE NI
Sbjct: 132 ALALEAAPDIVDLVKEVVVMGGAFGEKGHR-------------GNV-----TPFAEANIH 173
Query: 169 SDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFF 202
DP AA V + PV II LD T+ E+FF
Sbjct: 174 DDPHAADKVFTASWPVVIIGLDVTE-----ESFF 202
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 65/116 (56%), Gaps = 15/116 (12%)
Query: 551 WKSIVESIEPGSK-ITILTNGPLTNLAQIIGLQNSSSV---IQDVYIVGGNKGQDNEKGN 606
++ I++S+ K IT++ GPLTNLA + L+ + + +++V ++GG G+ +GN
Sbjct: 106 YQFIIDSVRAEPKEITLVAVGPLTNLA--LALEAAPDIVDLVKEVVVMGGAFGEKGHRGN 163
Query: 607 VFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFF--KILHKLRD 660
V + +AE N+ DP AA VF + + +I L + SFF + L +LRD
Sbjct: 164 V-----TPFAEANIHDDPHAADKVFTASWPVVIIGLDVTEE--SFFTSQYLDELRD 212
>gi|432529989|ref|ZP_19767032.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE233]
gi|431057065|gb|ELD66543.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE233]
Length = 311
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 64/137 (46%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + SA P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPE--PTFAP-QNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V S IPV + LD T
Sbjct: 176 IVFQSEIPVVMAGLDVT 192
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 TDIPV------AGGAVKPLM----------------RELIIADNVHGESGLDGPALPEPT 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES EP +TI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVELMA-------KTLRESAEP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S++ + + L
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSEIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHVEDTERFR 206
>gi|417645811|ref|ZP_12295704.1| Inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis VCU144]
gi|329731276|gb|EGG67646.1| Inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis VCU144]
Length = 313
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 99/198 (50%), Gaps = 10/198 (5%)
Query: 563 KITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFL 622
K+T+L GPLT+LA+ L+ +S+++++ + G +KGNV AE+N F
Sbjct: 120 KVTLLFTGPLTDLAK--ALKYDNSILKNIEKLVWMGGTFLDKGNVEEPEHDGTAEWNAFW 177
Query: 623 DPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQ 682
DP A K V +S + + ++ L +V ++ D+++ F L +
Sbjct: 178 DPEAVKVVLDSDMNVDIVALESTNQVPLTMEVRQMWADKRQYLGVDF---LGTSYAAVPP 234
Query: 683 SHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLV 742
H + FL +VL + G+P+L ++ K+K ++++S G S+ G E G+ V
Sbjct: 235 LTHFVTNSTYFLWDVLTTAYV-GSPNLVESTKLK-IDVVSQGP-SQGGTF--QSEYGREV 289
Query: 743 KVLESLNVAVYYDHFAEV 760
+V+ +N ++++ ++
Sbjct: 290 QVITDVNKQAFFNYITDL 307
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 64/151 (42%), Gaps = 28/151 (18%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
+T+ G T+ A L + + KNIE + MGG GN+
Sbjct: 121 VTLLFTGPLTDLAKALKYDNSILKNIEKLVWMGGTFLDK----------------GNVEE 164
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQY 216
+ + AE+N F DP A VL S + V I+ L++T +P++ E RQ + +
Sbjct: 165 PEHDGTAEWNAFWDPEAVKVVLDSDMNVDIVALESTNQVPLT------MEVRQ-MWADKR 217
Query: 217 CFQSLKMIRDTWSGSPPF-----HEAYCMWD 242
+ + + +++ PP + Y +WD
Sbjct: 218 QYLGVDFLGTSYAAVPPLTHFVTNSTYFLWD 248
>gi|418462462|ref|ZP_13033513.1| Inosine-uridine nucleoside N-ribohydrolase [Saccharomonospora
azurea SZMC 14600]
gi|359736862|gb|EHK85800.1| Inosine-uridine nucleoside N-ribohydrolase [Saccharomonospora
azurea SZMC 14600]
Length = 323
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 68/151 (45%), Gaps = 30/151 (19%)
Query: 57 YVNTNYGL--RKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFL 112
YV+ GL R A LP+ R P+ + A ++L + S P+T+ +G TN A L
Sbjct: 84 YVHGVDGLSGRSAALPEPER---PVERGGAVRLLARLLEDSDDPVTIVPVGPLTNIATLL 140
Query: 113 MNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPF 172
P L IE + +MGGA L +++ AEFNI+SDP
Sbjct: 141 AARPDLHHKIERVVIMGGA----------------------LLHGNTSAAAEFNIWSDPE 178
Query: 173 AAYTVLHSG-IPVTIIPLDATKTIPVSENFF 202
AA VL G +P ++P+D T V +
Sbjct: 179 AAQRVLGGGEVPCVLVPMDLTYRCAVDRAWL 209
>gi|423120098|ref|ZP_17107782.1| pyrimidine-specific ribonucleoside hydrolase rihA [Klebsiella
oxytoca 10-5246]
gi|376397460|gb|EHT10094.1| pyrimidine-specific ribonucleoside hydrolase rihA [Klebsiella
oxytoca 10-5246]
Length = 311
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 22/100 (22%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
S P+T+ G TN A+ L ++P L I I +MGGA+ +G
Sbjct: 115 SPQPVTIVATGPQTNVALLLNSHPELHDKIARIVLMGGAM-----------------VLG 157
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
N P AEFNI+ DP AA V SGIPV + LD T
Sbjct: 158 NW-----QPAAEFNIYVDPEAAEIVFQSGIPVVMAGLDVT 192
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 104/255 (40%), Gaps = 73/255 (28%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++GR
Sbjct: 1 MALPIILDCDPGHDDAIAMVLALASPE--LDVKAITASAGNQTPDKTLRNVLRMLTLLGR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV GG + L R+L
Sbjct: 59 QDIPVA-----------------GGARKP------------------LMREL------II 77
Query: 525 AENSVRFGASQDNDDPELRQP-------LAVDVW-KSIVESIEPGSKITILTNGPLTNLA 576
AEN D P L +P AV++ K++ ES +P +TI+ GP TN+A
Sbjct: 78 AEN---VHGESGLDGPALPEPDFTPQACTAVELMAKTLRESPQP---VTIVATGPQTNVA 131
Query: 577 QIIGLQNSSSVIQD----VYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFE 632
++ NS + D + ++GG N + AEFN+++DP AA+ VF+
Sbjct: 132 LLL---NSHPELHDKIARIVLMGGAMVLGNWQ---------PAAEFNIYVDPEAAEIVFQ 179
Query: 633 SKLEIKLIPLHMQRR 647
S + + + L + R
Sbjct: 180 SGIPVVMAGLDVTHR 194
>gi|392970486|ref|ZP_10335891.1| putative inosine/uridine-preferring nucleoside hydrolase
[Staphylococcus equorum subsp. equorum Mu2]
gi|403045544|ref|ZP_10901020.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus sp.
OJ82]
gi|392511526|emb|CCI59110.1| putative inosine/uridine-preferring nucleoside hydrolase
[Staphylococcus equorum subsp. equorum Mu2]
gi|402764365|gb|EJX18451.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus sp.
OJ82]
Length = 312
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 39/193 (20%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPT---AQQVLINAI--SAGPITVFVMGSHTNFAIFL 112
++ N GL LP+ P +PT A V+I + S P+T+ G TN A L
Sbjct: 82 IHGNTGLDGPKLPE-----VPSLKPTPDHAADVIIKTLKQSEEPVTIVATGPLTNIATAL 136
Query: 113 MNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPF 172
+ +P + + I+ I +MGG + GN P+ AEFNI+ D
Sbjct: 137 IKDPSITQYIDSITIMGGG------------------TFGNWTPN-----AEFNIWVDAE 173
Query: 173 AAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWS--- 229
AA + SG+ + + LD T + ++ F+R N A++ + L+ + T+
Sbjct: 174 AAKRIFDSGVTINVFGLDVTHQVLATDEVINRFKRIDNQI-AKFVVELLEFFKSTYKTHF 232
Query: 230 --GSPPFHEAYCM 240
P H+A +
Sbjct: 233 NMDGGPIHDACTI 245
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 117/281 (41%), Gaps = 51/281 (18%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M K ++ D D D +ALI L +++ + + + ++L +MGR
Sbjct: 1 MTKKIIMDCDPGHDDAIALI-LAGAKNSSLDVLAVTTVAGNQSVEKNTKNALNVLEVMGR 59
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DI V +VG P P +A I +G D P+ P +
Sbjct: 60 GDINV------SVGATRPLIKP---ASFASQIHGNTG------------LDGPKLPEVPS 98
Query: 525 AENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQ-IIGLQN 583
+ + A + K++ +S EP +TI+ GPLTN+A +I +
Sbjct: 99 LKPTPDHAADV--------------IIKTLKQSEEP---VTIVATGPLTNIATALIKDPS 141
Query: 584 SSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLH 643
+ I + I+GG GN + AEFN+++D AAK +F+S + I + L
Sbjct: 142 ITQYIDSITIMGGGTF-----GN-----WTPNAEFNIWVDAEAAKRIFDSGVTINVFGLD 191
Query: 644 MQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSH 684
+ +V + +++++ + R + F LL+ + ++H
Sbjct: 192 VTHQVLATDEVINRFK-RIDNQIAKFVVELLEFFKSTYKTH 231
>gi|87308050|ref|ZP_01090192.1| inosine-uridine preferring nucleoside hydrolase [Blastopirellula
marina DSM 3645]
gi|87289132|gb|EAQ81024.1| inosine-uridine preferring nucleoside hydrolase [Blastopirellula
marina DSM 3645]
Length = 315
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 63/147 (42%), Gaps = 24/147 (16%)
Query: 80 RQPTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCF 137
R P A++++ + I A P +T+ +G TN A L +P + I I +MGGAI +C
Sbjct: 100 RHP-AEKLICDEIRAAPEEVTIVALGPMTNIARALQRDPTIASQIGRIVIMGGAI--NCV 156
Query: 138 NSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPV 197
S P AEFN D AA TV S T+IPLD T+
Sbjct: 157 GSVT-------------------PAAEFNCHFDAMAARTVFKSRTTKTLIPLDVTRQAAF 197
Query: 198 SENFFVEFERRQNTYEAQYCFQSLKMI 224
+ + +++ +Q Q L +
Sbjct: 198 GLDLLDQLPNLESSPASQLLHQLLPFV 224
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 7/112 (6%)
Query: 563 KITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFL 622
++TI+ GP+TN+A+ LQ ++ + + G N G+V + AEFN
Sbjct: 117 EVTIVALGPMTNIAR--ALQRDPTIASQIGRIVIMGGAINCVGSV-----TPAAEFNCHF 169
Query: 623 DPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLL 674
D +AA+ VF+S+ LIPL + R+ A +L +L + + +P S +LL
Sbjct: 170 DAMAARTVFKSRTTKTLIPLDVTRQAAFGLDLLDQLPNLESSPASQLLHQLL 221
>gi|312965090|ref|ZP_07779327.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli 2362-75]
gi|312290181|gb|EFR18064.1| inosine-uridine preferring nucleoside hydrolase family protein
[Escherichia coli 2362-75]
Length = 207
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 22/100 (22%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
S P+T+ G TN A+ L ++P L I I +MGGA+ +G
Sbjct: 11 SEEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAM-----------------GLG 53
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
N P AEFNI+ DP AA V SGIPV + LD T
Sbjct: 54 NW-----TPAAEFNIYVDPEAAEIVFQSGIPVVMAGLDVT 88
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 13/97 (13%)
Query: 552 KSIVESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEKGNVFTV 610
K++ ES EP +TI++ GP TN+A ++ S I + I+GG G N
Sbjct: 6 KTLRESEEP---VTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGLGN-------- 54
Query: 611 PSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
+ AEFN+++DP AA+ VF+S + + + L + +
Sbjct: 55 -WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGLDVTHK 90
>gi|57867786|ref|YP_189426.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis RP62A]
gi|251812014|ref|ZP_04826487.1| purine nucleosidase [Staphylococcus epidermidis BCM-HMP0060]
gi|417911833|ref|ZP_12555532.1| Inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis VCU105]
gi|417913286|ref|ZP_12556955.1| Inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis VCU109]
gi|418610817|ref|ZP_13173924.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis VCU065]
gi|418622792|ref|ZP_13185526.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis VCU123]
gi|418623879|ref|ZP_13186575.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis VCU125]
gi|418628620|ref|ZP_13191158.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis VCU127]
gi|420166498|ref|ZP_14673183.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIHLM088]
gi|420170767|ref|ZP_14677326.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIHLM070]
gi|420173493|ref|ZP_14679985.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIHLM067]
gi|420188276|ref|ZP_14694286.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIHLM039]
gi|420198471|ref|ZP_14704181.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIHLM020]
gi|420203371|ref|ZP_14708950.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIHLM018]
gi|420210006|ref|ZP_14715439.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIHLM003]
gi|420228322|ref|ZP_14733074.1| Inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis NIH05003]
gi|421607998|ref|ZP_16049230.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis AU12-03]
gi|57638444|gb|AAW55232.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis RP62A]
gi|251804462|gb|EES57119.1| purine nucleosidase [Staphylococcus epidermidis BCM-HMP0060]
gi|341651832|gb|EGS75624.1| Inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis VCU105]
gi|341656379|gb|EGS80098.1| Inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis VCU109]
gi|374403654|gb|EHQ74654.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis VCU065]
gi|374825597|gb|EHR89528.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis VCU123]
gi|374829223|gb|EHR93030.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis VCU125]
gi|374836555|gb|EHS00138.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis VCU127]
gi|394233709|gb|EJD79306.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIHLM088]
gi|394239819|gb|EJD85252.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIHLM070]
gi|394239848|gb|EJD85280.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIHLM067]
gi|394254916|gb|EJD99877.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIHLM039]
gi|394264278|gb|EJE08968.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIHLM020]
gi|394268044|gb|EJE12617.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIHLM018]
gi|394277438|gb|EJE21762.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIHLM003]
gi|394294906|gb|EJE38566.1| Inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis NIH05003]
gi|406656419|gb|EKC82826.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis AU12-03]
Length = 313
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 97/198 (48%), Gaps = 10/198 (5%)
Query: 563 KITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFL 622
K+T+L GPLT+LA+ I NS +++++ + G +KGNV AE+N F
Sbjct: 120 KVTLLFTGPLTDLAKAIKYDNS--ILKNIEKLVWMGGTFLDKGNVEEPEHDGTAEWNAFW 177
Query: 623 DPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQ 682
DP A K V +S + + ++ L +V ++ D+++ F L +
Sbjct: 178 DPEAVKVVLDSDMNVDIVALESTNQVPLTMEVRQMWADKRQYLGVDF---LGTSYAAVPP 234
Query: 683 SHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLV 742
H + FL +VL + G+P+L ++ K+K ++++S G G+ E G+ V
Sbjct: 235 LTHFVTNSTYFLWDVLTTAYV-GSPNLVESTKLK-IDVVSQG--PSQGRTF-QSEYGREV 289
Query: 743 KVLESLNVAVYYDHFAEV 760
+V+ +N ++++ ++
Sbjct: 290 QVITDVNKQAFFNYITDL 307
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 28/151 (18%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
+T+ G T+ A + + + KNIE + MGG GN+
Sbjct: 121 VTLLFTGPLTDLAKAIKYDNSILKNIEKLVWMGGTFLDK----------------GNVEE 164
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQY 216
+ + AE+N F DP A VL S + V I+ L++T +P++ E RQ + +
Sbjct: 165 PEHDGTAEWNAFWDPEAVKVVLDSDMNVDIVALESTNQVPLT------MEVRQ-MWADKR 217
Query: 217 CFQSLKMIRDTWSGSPPF-----HEAYCMWD 242
+ + + +++ PP + Y +WD
Sbjct: 218 QYLGVDFLGTSYAAVPPLTHFVTNSTYFLWD 248
>gi|358064696|ref|ZP_09151258.1| hypothetical protein HMPREF9473_03321 [Clostridium hathewayi
WAL-18680]
gi|356697031|gb|EHI58628.1| hypothetical protein HMPREF9473_03321 [Clostridium hathewayi
WAL-18680]
Length = 325
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 60/138 (43%), Gaps = 26/138 (18%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
S G IT+ +G TN A+ L P + + I+ I +MGG R
Sbjct: 124 SEGDITLVPVGPLTNIAMALRAEPAIAEKIKQIVLMGGGCRE-----------------A 166
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTY 212
N+ P AEFN + DP AA V SG +T++PLDAT +S E RR T
Sbjct: 167 NI-----TPSAEFNFWIDPEAAKIVFGSGCDITVVPLDATHAAAISIEDAKEL-RRMGT- 219
Query: 213 EAQYCFQSLKMIRDTWSG 230
+ + +I W+G
Sbjct: 220 --KASVMTADIIEHRWNG 235
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 115/269 (42%), Gaps = 44/269 (16%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
V+ D+D D +A++ L P EL ++ GI + T + ++ +G +P
Sbjct: 4 VILDVDTGTDDAIAIMLALLSP-EL-DVIGICSVNGNRGIEFTTENTLRVVEYLGAAQVP 61
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLD-SDTLYGLARDLPRSPRRYTAEN 527
V G V P + + I + G D D ++G DLP + + N
Sbjct: 62 VHRGCVL---------PMVSTLSPGRRINIPYTGPEDPEDNVHGDYVDLPPATIKPAPGN 112
Query: 528 SVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS-SS 586
+V + + +++ES IT++ GPLTN+A + + + +
Sbjct: 113 AVSW------------------LIDTLMES---EGDITLVPVGPLTNIAMALRAEPAIAE 151
Query: 587 VIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQR 646
I+ + ++GG + N PS AEFN ++DP AAK VF S +I ++PL
Sbjct: 152 KIKQIVLMGGGCREAN------ITPS---AEFNFWIDPEAAKIVFGSGCDITVVPLDATH 202
Query: 647 RVASFFKILHKLRDRKKTPESVFSQRLLQ 675
A + +LR R T SV + +++
Sbjct: 203 AAAISIEDAKELR-RMGTKASVMTADIIE 230
>gi|114706078|ref|ZP_01438981.1| inosine-uridine preferring nucleoside hydrolase [Fulvimarina pelagi
HTCC2506]
gi|114538924|gb|EAU42045.1| inosine-uridine preferring nucleoside hydrolase [Fulvimarina pelagi
HTCC2506]
Length = 313
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 82/201 (40%), Gaps = 36/201 (17%)
Query: 88 LINAISA---GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQ 144
LI+ + A G I + +G TN A+ P + ++ I +MGG
Sbjct: 109 LIDTVRAHEPGTIRLLCLGPLTNVALAFAKAPDIPGRLKDIVMMGGGYFE---------- 158
Query: 145 SEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVE 204
+GN+ P AEFNI+ DP AA V SG +T++PLD T + ++
Sbjct: 159 ------VGNI-----TPTAEFNIYVDPEAASAVFRSGAALTVLPLDVTHRMRSTKERIEA 207
Query: 205 FE----RRQNTYEAQYCF-QSLKMIRDTWSGSP---PFHEAYCMWDSFMAGVALSIMLNS 256
F R + A F + + + W G+P P A+ + G A++ M+ +
Sbjct: 208 FRAIGNRSGDAVAAMLSFSERFDVEKYNWEGAPLHDPCVTAFVLRPDIFEGRAVNAMIET 267
Query: 257 SSHNGENACSEMEYMNLTVVT 277
G C M ++ VT
Sbjct: 268 ----GSELCRGMTVVDYWGVT 284
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 112/265 (42%), Gaps = 66/265 (24%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M + V+FD D D +A++ L P E I++ GI+ + T LL + GR
Sbjct: 1 MAQKVIFDTDPGQDDAVAILTALASPDE-IDVLGIVTVAGNIPLDLTTKNALKLLELGGR 59
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
++IPV +P GC P G R L T
Sbjct: 60 NEIPV-----------HP------GCSK----PFG--------------RTL------VT 78
Query: 525 AENSVRFGASQDNDDPELRQPL-------AVDVWKSIVESIEPGSKITILTNGPLTNLAQ 577
AE+ D P+L +P VD V + EPG+ I +L GPLTN+A
Sbjct: 79 AEH---VHGKTGLDGPDLPEPKIVAQSQHGVDFLIDTVRAHEPGT-IRLLCLGPLTNVA- 133
Query: 578 IIGLQNSSSV---IQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESK 634
+ + + ++D+ ++GG E GN+ + AEFN+++DP AA AVF S
Sbjct: 134 -LAFAKAPDIPGRLKDIVMMGGGY---FEVGNI-----TPTAEFNIYVDPEAASAVFRSG 184
Query: 635 LEIKLIPLHMQRRVASFFKILHKLR 659
+ ++PL + R+ S + + R
Sbjct: 185 AALTVLPLDVTHRMRSTKERIEAFR 209
>gi|392307728|ref|ZP_10270262.1| inosine/uridine-preferring nucleoside hydrolase [Pseudoalteromonas
citrea NCIMB 1889]
Length = 316
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 22/159 (13%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNN 115
V+ N GL +P + + + A +IN + A P IT+ +G TN A+ L
Sbjct: 80 VHGNNGLGNITIPS--EQTSQVINQLAHDYIINTVKAHPHEITLIAIGRLTNLALALSKA 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P + ++ + +MGGA FN GNL P+AE N++ DP AA
Sbjct: 138 PEIASLVKEVIIMGGAF---GFNG----------HTGNL-----TPFAEANVYGDPHAAD 179
Query: 176 TVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEA 214
V+ + PVT++ LD T+ +S + + + + + Y A
Sbjct: 180 IVVSANWPVTMVGLDVTQQSIISTAYINDLKSKSSKYGA 218
>gi|419006313|ref|ZP_13553769.1| ribonucleoside hydrolase 1 [Escherichia coli DEC1C]
gi|419027584|ref|ZP_13574783.1| ribonucleoside hydrolase 1 [Escherichia coli DEC2C]
gi|419038364|ref|ZP_13585424.1| ribonucleoside hydrolase 1 [Escherichia coli DEC2E]
gi|377851114|gb|EHU16069.1| ribonucleoside hydrolase 1 [Escherichia coli DEC1C]
gi|377885467|gb|EHU49962.1| ribonucleoside hydrolase 1 [Escherichia coli DEC2C]
gi|377898608|gb|EHU62968.1| ribonucleoside hydrolase 1 [Escherichia coli DEC2E]
Length = 204
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 22/100 (22%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
S P+T+ G TN A+ L ++P L I I +MGGA+ +G
Sbjct: 8 SEEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAM-----------------GLG 50
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
N P AEFNI+ DP AA V SGIPV + LD T
Sbjct: 51 NW-----TPAAEFNIYVDPEAAEIVFQSGIPVVMAGLDVT 85
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 13/97 (13%)
Query: 552 KSIVESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEKGNVFTV 610
K++ ES EP +TI++ GP TN+A ++ S I + I+GG G N
Sbjct: 3 KTLRESEEP---VTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGLGN-------- 51
Query: 611 PSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
+ AEFN+++DP AA+ VF+S + + + L + +
Sbjct: 52 -WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGLDVTHK 87
>gi|377556790|ref|ZP_09786473.1| Putative ribosylpyrimidine nucleosidase [Lactobacillus gastricus
PS3]
gi|376167401|gb|EHS86241.1| Putative ribosylpyrimidine nucleosidase [Lactobacillus gastricus
PS3]
Length = 304
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 56/115 (48%), Gaps = 22/115 (19%)
Query: 78 PLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCF 137
P+ +P + + ++ IT+ GS+TN A+ L P +K +I+ I MGG+I
Sbjct: 98 PIAKPAVEALHDAIMAEDEITLVPTGSYTNIALLLAEYPEVKSHIKQIVAMGGSI----- 152
Query: 138 NSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
S GN+ AEFN+F+DP AA + SGIP+ + LD T
Sbjct: 153 ------------SGGNM-----TSVAEFNVFTDPDAASIMYQSGIPIVTVGLDVT 190
Score = 39.7 bits (91), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 21/157 (13%)
Query: 544 QPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIG-LQNSSSVIQDVYIVGGNKGQDN 602
QP+A +++ ++I +IT++ G TN+A ++ S I+ + +GG+
Sbjct: 97 QPIAKPAVEALHDAIMAEDEITLVPTGSYTNIALLLAEYPEVKSHIKQIVAMGGSI---- 152
Query: 603 EKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRK 662
GN+ +V AEFN+F DP AA +++S + I + L + + KL
Sbjct: 153 SGGNMTSV-----AEFNVFTDPDAASIMYQSGIPIVTVGLDVTLKALLTPATQAKLLSLG 207
Query: 663 KTPESVFSQRLLQGLMTL-----QQSHHSYHHVDTFL 694
+T ++L GL+T + H H V+T
Sbjct: 208 ET------GKMLHGLITHYNDGDNEQGHPMHDVNTIF 238
>gi|56414210|ref|YP_151285.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197363133|ref|YP_002142770.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|81361775|sp|Q5PM78.1|RIHA_SALPA RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|226739286|sp|B5BCD9.1|RIHA_SALPK RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|56128467|gb|AAV77973.1| probable nucleoside hydrolase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197094610|emb|CAR60132.1| probable nucleoside hydrolase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 311
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 59/128 (46%), Gaps = 33/128 (25%)
Query: 67 AFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEH 124
+F PQ G TA +++ + S+ P+T+ G TN A+ L ++P L I
Sbjct: 96 SFAPQSG---------TAVELMAKTLRESSQPVTIVSTGPQTNVALLLNSHPELHAKIAR 146
Query: 125 IYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPV 184
I +MGGA+ +GN P AEFNI+ DP AA V SGIPV
Sbjct: 147 IVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAEIVFQSGIPV 184
Query: 185 TIIPLDAT 192
+ L+ T
Sbjct: 185 VMAGLNVT 192
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 107/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + +K I S+ T+ V +L ++ R
Sbjct: 1 MALPIIIDCDPGHDDAIALVLALASPE--LEVKAITSSAGNQTPEKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 PDIPV------AGGAVKPLM----------------RELIIADNVHGESGLDGPALP--- 93
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
E S A Q EL K++ ES +P +TI++ GP TN+A ++
Sbjct: 94 --EPSF---APQSGTAVELMA-------KTLRESSQP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+ I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHAKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
++ + + + R
Sbjct: 190 NVTHKAQIHAADIERFR 206
>gi|313900580|ref|ZP_07834073.1| cytidine/uridine-specific hydrolase [Clostridium sp. HGF2]
gi|373124547|ref|ZP_09538388.1| hypothetical protein HMPREF0982_03317 [Erysipelotrichaceae
bacterium 21_3]
gi|422326449|ref|ZP_16407477.1| hypothetical protein HMPREF0981_00797 [Erysipelotrichaceae
bacterium 6_1_45]
gi|312954642|gb|EFR36317.1| cytidine/uridine-specific hydrolase [Clostridium sp. HGF2]
gi|371659515|gb|EHO24780.1| hypothetical protein HMPREF0982_03317 [Erysipelotrichaceae
bacterium 21_3]
gi|371666028|gb|EHO31185.1| hypothetical protein HMPREF0981_00797 [Erysipelotrichaceae
bacterium 6_1_45]
Length = 306
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 62/149 (41%), Gaps = 31/149 (20%)
Query: 79 LRQPTAQQVLINAI---------SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMG 129
+PT Q + NA+ S+ P+T+ + TN A+ L P +K+NI I +MG
Sbjct: 93 FEEPTQQPLKENAVDAMRNVIMNSSEPVTLVPIAPLTNIALLLKTYPEVKRNIREIVLMG 152
Query: 130 GAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPL 189
G+ S GN AEFNI DP AA+ V HSG+ +T++ L
Sbjct: 153 GSA-----------------SRGN-----KGVMAEFNIALDPEAAHMVFHSGVKLTMVGL 190
Query: 190 DATKTIPVSENFFVEFERRQNTYEAQYCF 218
D V E T E YC
Sbjct: 191 DVGLKALVLPEDSEEIRTMNKTGEMAYCL 219
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 115/274 (41%), Gaps = 71/274 (25%)
Query: 407 KPVVFDIDMSAGDFLALIYLL---KLPVELINLKGILVSSTGWATSATVDVVYDLLHMM- 462
+P++ D D D LA+ L +L V LI ST V Y+ L ++
Sbjct: 4 RPIIIDTDPGIDDALAIAIALFSDELDVRLI--------STVAGNVGLDKVTYNALRLLK 55
Query: 463 --GRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSP 520
GR+D+PV AVG P F D+ +++G
Sbjct: 56 YFGREDVPV------AVGADRPLIRE----------------FEDASSVHG--------- 84
Query: 521 RRYTAENSVRFGASQDNDDPELRQPL---AVDVWKSIV-ESIEPGSKITILTNGPLTNLA 576
+ G + + +QPL AVD ++++ S EP +T++ PLTN+A
Sbjct: 85 ---------KSGMEGFDFEEPTQQPLKENAVDAMRNVIMNSSEP---VTLVPIAPLTNIA 132
Query: 577 QIIGLQ-NSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ I+++ ++GG+ + N KG + AEFN+ LDP AA VF S +
Sbjct: 133 LLLKTYPEVKRNIREIVLMGGSASRGN-KGVM--------AEFNIALDPEAAHMVFHSGV 183
Query: 636 EIKLIPLHMQRRVASFFKILHKLRDRKKTPESVF 669
++ ++ L + + + ++R KT E +
Sbjct: 184 KLTMVGLDVGLKALVLPEDSEEIRTMNKTGEMAY 217
>gi|114328004|ref|YP_745161.1| inosine-uridine preferring nucleoside hydrolase [Granulibacter
bethesdensis CGDNIH1]
gi|114316178|gb|ABI62238.1| inosine-uridine preferring nucleoside hydrolase [Granulibacter
bethesdensis CGDNIH1]
Length = 311
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 70/178 (39%), Gaps = 30/178 (16%)
Query: 96 PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY 155
P+T+ +G TN A+ L P L NI+ I +M G+ GN+
Sbjct: 124 PVTLVGIGPATNLALALATEPTLCTNIDQIVLMSGSAGR-----------------GNV- 165
Query: 156 PDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQ 215
PYAEFN +SDP A ++ SG+ V ++ LD T+ ++ +
Sbjct: 166 ----TPYAEFNAWSDPEALSILIGSGVSVVLVTLDLTRQARITPERIARLRKYGTGRALN 221
Query: 216 YCFQSLKMIRDTWSGSPPFHEAYCMWDSFMAG-------VALSIMLNSSSHNGENACS 266
L + T G P H+ C +A V +S+ML + G+ S
Sbjct: 222 TACDILSRVPLTEQGGEPLHDP-CAIAWLVAPHLFSTRLVDVSVMLGAGERRGQTMLS 278
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 546 LAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS-SSVIQDVYIVGGNKGQDNEK 604
LA DV ++I+ E +T++ GP TNLA + + + + I + ++ G+ G +
Sbjct: 109 LAADVIRAILRDNE--KPVTLVGIGPATNLALALATEPTLCTNIDQIVLMSGSAG----R 162
Query: 605 GNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLR 659
GNV + YAEFN + DP A + S + + L+ L + R+ + + +LR
Sbjct: 163 GNV-----TPYAEFNAWSDPEALSILIGSGVSVVLVTLDLTRQARITPERIARLR 212
>gi|54309246|ref|YP_130266.1| ribonucleoside hydrolase 1 [Photobacterium profundum SS9]
gi|81399432|sp|Q6LQG2.1|RIHA_PHOPR RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|46913678|emb|CAG20464.1| putstive inosine-uridine preferring nucleoside hydrolase family
protein [Photobacterium profundum SS9]
Length = 310
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 117/283 (41%), Gaps = 68/283 (24%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M +P++ D D D +ALI P +++K + S+ T+ +L ++GR
Sbjct: 1 MSRPIIIDCDPGHDDAIALILACASPE--LDIKAVTTSAGNQTPEKTLHNALRILTLVGR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV +GG L L+R+L
Sbjct: 59 TDIPV------------------------------AGGALQP-----LSREL------II 77
Query: 525 AENSVRFGASQDNDDPELRQPL-------AVDVWKSIV-ESIEPGSKITILTNGPLTNLA 576
A+N D P L +P AV++ I+ E+ EP +T++ GPLTN+A
Sbjct: 78 ADN---VHGETGLDGPVLPEPAFEPQPCHAVELMAKILTEATEP---VTLVPTGPLTNIA 131
Query: 577 QIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ S I + ++GG+ E GN + AEFN+++DP AA VF+S +
Sbjct: 132 LLLATHRELHSQIDSIVLMGGSA----EAGN-----WTPAAEFNIYVDPEAADIVFKSGI 182
Query: 636 EIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLM 678
I + L + R + + K+R + P + + LL M
Sbjct: 183 PITMCGLDVTHRAQIMDEDIEKIR-KINNPVAQVTAELLDFFM 224
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 75/177 (42%), Gaps = 32/177 (18%)
Query: 51 PVGQRLYVNTNY----GLRKAFLPQGGRKYAPLRQPTAQQVLINAISAG--PITVFVMGS 104
P+ + L + N GL LP+ + P A +++ ++ P+T+ G
Sbjct: 70 PLSRELIIADNVHGETGLDGPVLPEPAFEPQPCH---AVELMAKILTEATEPVTLVPTGP 126
Query: 105 HTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAE 164
TN A+ L + L I+ I +MGG+ + GN P AE
Sbjct: 127 LTNIALLLATHRELHSQIDSIVLMGGSAEA-----------------GNW-----TPAAE 164
Query: 165 FNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSL 221
FNI+ DP AA V SGIP+T+ LD T + + +E R+ N AQ + L
Sbjct: 165 FNIYVDPEAADIVFKSGIPITMCGLDVTHRAQIMDE-DIEKIRKINNPVAQVTAELL 220
>gi|238790773|ref|ZP_04634532.1| Pyrimidine-specific ribonucleoside hydrolase rihA [Yersinia
frederiksenii ATCC 33641]
gi|238721131|gb|EEQ12812.1| Pyrimidine-specific ribonucleoside hydrolase rihA [Yersinia
frederiksenii ATCC 33641]
Length = 312
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 47/100 (47%), Gaps = 22/100 (22%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
S P+T+ G TN A+ L + L IE I +MGGA+ +G
Sbjct: 115 SPHPVTIVATGPLTNVALLLAGHGALMAKIERIVIMGGAV-----------------MLG 157
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
N P AEFNIF DP AA V SGIP+T+ LD T
Sbjct: 158 NW-----TPAAEFNIFVDPEAAERVFKSGIPLTMAGLDVT 192
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 564 ITILTNGPLTNLAQIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFL 622
+TI+ GPLTN+A ++ + + I+ + I+GG N + AEFN+F+
Sbjct: 119 VTIVATGPLTNVALLLAGHGALMAKIERIVIMGGAVMLGN---------WTPAAEFNIFV 169
Query: 623 DPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLR 659
DP AA+ VF+S + + + L + + + + ++R
Sbjct: 170 DPEAAERVFKSGIPLTMAGLDVTHQAQVMDEDIDRIR 206
>gi|302340391|ref|YP_003805597.1| inosine/uridine-preferring nucleoside hydrolase [Spirochaeta
smaragdinae DSM 11293]
gi|301637576|gb|ADK83003.1| Inosine/uridine-preferring nucleoside hydrolase [Spirochaeta
smaragdinae DSM 11293]
Length = 325
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 59/121 (48%), Gaps = 24/121 (19%)
Query: 79 LRQPTAQQVLINAI-SAG-PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDC 136
+R+ A L++ + +AG IT+ + TN A+ L +P + NIE I +MGG++ S
Sbjct: 113 VRKAHACSFLVDTLRNAGEKITIIGVAPLTNIAVALRMDPSIASNIEEIVIMGGSVSS-- 170
Query: 137 FNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIP 196
GN P AE N + DP AA VL SG PV I L+AT+ +P
Sbjct: 171 ---------------GN-----RTPTAEANFYDDPEAAQIVLKSGCPVRIFTLEATERVP 210
Query: 197 V 197
Sbjct: 211 C 211
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
Query: 561 GSKITILTNGPLTNLAQIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFN 619
G KITI+ PLTN+A + + S +S I+++ I+GG+ N + AE N
Sbjct: 130 GEKITIIGVAPLTNIAVALRMDPSIASNIEEIVIMGGSVSSGNR---------TPTAEAN 180
Query: 620 MFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
+ DP AA+ V +S +++ L RV
Sbjct: 181 FYDDPEAAQIVLKSGCPVRIFTLEATERV 209
>gi|346315529|ref|ZP_08857042.1| hypothetical protein HMPREF9022_02699 [Erysipelotrichaceae
bacterium 2_2_44A]
gi|345904505|gb|EGX74252.1| hypothetical protein HMPREF9022_02699 [Erysipelotrichaceae
bacterium 2_2_44A]
Length = 306
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 62/149 (41%), Gaps = 31/149 (20%)
Query: 79 LRQPTAQQVLINAI---------SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMG 129
+PT Q + NA+ S+ P+T+ + TN A+ L P +K+NI I +MG
Sbjct: 93 FEEPTQQPLKENAVDAMRNVIMNSSEPVTLVPIAPLTNIALLLKTYPEVKRNIREIVLMG 152
Query: 130 GAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPL 189
G+ S GN AEFNI DP AA+ V HSG+ +T++ L
Sbjct: 153 GSA-----------------SRGN-----KGVMAEFNIALDPEAAHMVFHSGVKLTMVGL 190
Query: 190 DATKTIPVSENFFVEFERRQNTYEAQYCF 218
D V E T E YC
Sbjct: 191 DVGLKALVLPEDSEEIRTMNKTGEMAYCL 219
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 117/276 (42%), Gaps = 75/276 (27%)
Query: 407 KPVVFDIDMSAGDFLALIYLL---KLPVELINLKGILVSSTGWATSATVDVVYDLLHMM- 462
+P++ D D D LA+ L +L + LI ST V Y+ L ++
Sbjct: 4 RPIIIDTDPGIDDALAIAIALFSEELDIRLI--------STVAGNVGLDKVTYNALRLLK 55
Query: 463 --GRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSP 520
GR+D+PV AVG P F D+ +++G
Sbjct: 56 YFGREDVPV------AVGADRPLIRE----------------FEDASSVHG--------- 84
Query: 521 RRYTAENSVRFGASQDNDDPELRQPL---AVDVWKSIV-ESIEPGSKITILTNGPLTNLA 576
+ G + + +QPL AVD ++++ S EP +T++ PLTN+A
Sbjct: 85 ---------KSGMEGFDFEEPTQQPLKENAVDAMRNVIMNSSEP---VTLVPIAPLTNIA 132
Query: 577 QIIGLQNSSSV---IQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFES 633
+ L+ V I+++ ++GG+ + N KG + AEFN+ LDP AA VF S
Sbjct: 133 LL--LKTYPEVKRNIREIVLMGGSASRGN-KGVM--------AEFNIALDPEAAHMVFHS 181
Query: 634 KLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVF 669
+++ ++ L + + + ++R KT E +
Sbjct: 182 GVKLTMVGLDVGLKALVLPEDSEEIRTMNKTGEMAY 217
>gi|223043899|ref|ZP_03613941.1| Non-specific ribonucleoside hydrolase RihC (Purine/pyrimidine
ribonucleoside hydrolase) [Staphylococcus capitis SK14]
gi|222442803|gb|EEE48906.1| Non-specific ribonucleoside hydrolase RihC (Purine/pyrimidine
ribonucleoside hydrolase) [Staphylococcus capitis SK14]
Length = 302
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 22/119 (18%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
S P+T+ +G TN AI L P + I+ I +MGG+ G
Sbjct: 115 SEKPMTIIAIGPLTNIAILLSTYPEVTDYIKEIVLMGGSTGR-----------------G 157
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNT 211
N+ P AEFNI+ DP AA V +SG+P+T+I LD + + ++ F+ + T
Sbjct: 158 NV-----TPLAEFNIYCDPEAAQVVFNSGLPLTMIGLDLAREAIFTHDYVKSFKNQNET 211
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 69/126 (54%), Gaps = 14/126 (11%)
Query: 541 ELRQPLAVDVWK-SIVESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNK 598
+L AV+ K +I++S +P +TI+ GPLTN+A ++ + I+++ ++GG+
Sbjct: 98 DLASTHAVEAMKETILKSEKP---MTIIAIGPLTNIAILLSTYPEVTDYIKEIVLMGGST 154
Query: 599 GQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKL 658
G +GNV + AEFN++ DP AA+ VF S L + +I L + R +
Sbjct: 155 G----RGNV-----TPLAEFNIYCDPEAAQVVFNSGLPLTMIGLDLAREAIFTHDYVKSF 205
Query: 659 RDRKKT 664
+++ +T
Sbjct: 206 KNQNET 211
>gi|357023972|ref|ZP_09086138.1| ribosylpyrimidine nucleosidase [Mesorhizobium amorphae CCNWGS0123]
gi|355544063|gb|EHH13173.1| ribosylpyrimidine nucleosidase [Mesorhizobium amorphae CCNWGS0123]
Length = 313
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 75/182 (41%), Gaps = 30/182 (16%)
Query: 86 QVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQS 145
+ L+N S G IT+ +G TN A+ L+ P + I+ I +MGG F N +
Sbjct: 112 ETLMNEPS-GTITLCALGPLTNVALALIREPRIAPRIKEIVLMGGGF----FEGGNVT-- 164
Query: 146 EQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK---TIPVSENFF 202
P AEFNI+ DP AA V +GIP+ ++PLD T T F
Sbjct: 165 ---------------PTAEFNIYVDPHAADIVFKAGIPIVMMPLDVTHKALTTAKRTQAF 209
Query: 203 VEFERRQNTYEAQYC--FQSLKMIRDTWSGSP---PFHEAYCMWDSFMAGVALSIMLNSS 257
+ R T A+ F+ + G P P AY + G ++ + +S
Sbjct: 210 RKLGTRVGTATAEMLEFFERFDEEKYGTDGGPLHDPCVIAYLLKPELFEGRNCNVTVETS 269
Query: 258 SH 259
S
Sbjct: 270 SE 271
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
Query: 554 IVESI--EPGSKITILTNGPLTNLA-QIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTV 610
IVE++ EP IT+ GPLTN+A +I + I+++ ++GG E GNV
Sbjct: 110 IVETLMNEPSGTITLCALGPLTNVALALIREPRIAPRIKEIVLMGGGF---FEGGNV--- 163
Query: 611 PSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLR 659
+ AEFN+++DP AA VF++ + I ++PL + + + K R
Sbjct: 164 --TPTAEFNIYVDPHAADIVFKAGIPIVMMPLDVTHKALTTAKRTQAFR 210
>gi|433773986|ref|YP_007304453.1| Inosine-uridine nucleoside N-ribohydrolase [Mesorhizobium
australicum WSM2073]
gi|433666001|gb|AGB45077.1| Inosine-uridine nucleoside N-ribohydrolase [Mesorhizobium
australicum WSM2073]
Length = 314
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 61/141 (43%), Gaps = 27/141 (19%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP---ITVFVMGSHTNFAIFLM 113
YV+ GL A L + PLR A ++ I P +TV +G TN A+ +
Sbjct: 82 YVHGETGLDGADLAE---PVTPLRGEHAVNYMVRTIMDAPEGELTVCTLGPMTNLAMAMT 138
Query: 114 NNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFA 173
P + + + +MGG F N++ P AEFNIF DP A
Sbjct: 139 MEPRIVPRLREVVLMGGGF----FQGGNAT-----------------PAAEFNIFVDPHA 177
Query: 174 AYTVLHSGIPVTIIPLDATKT 194
A+ V SG PVT+ +D T T
Sbjct: 178 AHKVFDSGAPVTMAGIDCTYT 198
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 96/235 (40%), Gaps = 50/235 (21%)
Query: 407 KPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDD 466
+ ++ D D D A+++ L P EL ++ GI + T ++ + GR D
Sbjct: 4 RKIIIDTDPGQDDAFAILFALGSPDEL-DVVGITTVGGNVPLALTSKNALKVVELAGRPD 62
Query: 467 IPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDT-LYGLARDLPRSPRRYTA 525
+PV GC L + ++ +T L G P +P R
Sbjct: 63 VPV-----------------YAGCPAPMVRKLITAEYVHGETGLDGADLAEPVTPLR--G 103
Query: 526 ENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ-NS 584
E++V + D PE ++T+ T GP+TNLA + ++
Sbjct: 104 EHAVNYMVRTIMDAPE--------------------GELTVCTLGPMTNLAMAMTMEPRI 143
Query: 585 SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKL 639
+++V ++GG Q GN ++ AEFN+F+DP AA VF+S + +
Sbjct: 144 VPRLREVVLMGGGFFQ---GGN-----ATPAAEFNIFVDPHAAHKVFDSGAPVTM 190
>gi|423349039|ref|ZP_17326695.1| hypothetical protein HMPREF9156_00233 [Scardovia wiggsiae F0424]
gi|393703268|gb|EJD65469.1| hypothetical protein HMPREF9156_00233 [Scardovia wiggsiae F0424]
Length = 318
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 109/256 (42%), Gaps = 52/256 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M + ++ D D D +A++ + P I+L G+ + +LH G
Sbjct: 1 MTERIILDCDPGHDDAVAILLAVGNPD--IDLIGVTTVGGNQSLDKVTYNARSVLHKAGA 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDT-LYGLARDLPRSPRRY 523
DDIPV GC PL + ++ +T L G+ +LP R
Sbjct: 59 DDIPV-----------------YSGCDRPLVRPLKTAAYVHGETGLDGV--ELPEPVRPL 99
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ- 582
E++V + + +++++S EPG+ +T++ GPLTN+A + ++
Sbjct: 100 ENEHAVNY------------------LVRTVMDS-EPGT-VTLVPTGPLTNIAMALRMEP 139
Query: 583 NSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+ ++ V ++GG V+ SS +EFN++ DP AA+ VF + E+ ++ L
Sbjct: 140 KIAERVKQVVLMGGG---------VYEANSSACSEFNIYTDPEAAQIVFSAPWEVTMVGL 190
Query: 643 HMQRRVASFFKILHKL 658
+ I K+
Sbjct: 191 DVTHHALCTRDIQRKI 206
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 28/145 (19%)
Query: 51 PVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI---SAGPITVFVMGSHTN 107
P+ YV+ GL LP+ R PL A L+ + G +T+ G TN
Sbjct: 74 PLKTAAYVHGETGLDGVELPEPVR---PLENEHAVNYLVRTVMDSEPGTVTLVPTGPLTN 130
Query: 108 FAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNI 167
A+ L P + + ++ + +MGG + Y +S+ +EFNI
Sbjct: 131 IAMALRMEPKIAERVKQVVLMGGGV----------------------YEANSSACSEFNI 168
Query: 168 FSDPFAAYTVLHSGIPVTIIPLDAT 192
++DP AA V + VT++ LD T
Sbjct: 169 YTDPEAAQIVFSAPWEVTMVGLDVT 193
>gi|242371931|ref|ZP_04817505.1| purine nucleosidase [Staphylococcus epidermidis M23864:W1]
gi|242350438|gb|EES42039.1| purine nucleosidase [Staphylococcus epidermidis M23864:W1]
Length = 312
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 104/213 (48%), Gaps = 11/213 (5%)
Query: 549 DVWKSIVESIEPGSK-ITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNV 607
+ ++ I++ + SK +T+L GPLT+LA+ I +++ + + +V + G +KGNV
Sbjct: 106 EAYEDIIQKVNMSSKKVTLLFTGPLTDLAKAI--RHNDAFLANVEKLVWMGGTFLDKGNV 163
Query: 608 FTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPES 667
AE+N F DP A K VF+SK++I ++ L +V + + D + E
Sbjct: 164 EEPEHDGTAEWNAFWDPEAVKTVFDSKIKIDMVALESTNQVPLTLDVRQRWADER---EH 220
Query: 668 VFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKSLEIISDGDIS 727
V L + H + FL +VL + G P L ++ K+ ++++IS G
Sbjct: 221 VGIDFLGVSYAAVPPLTHFVTNSTYFLWDVLTTAYV-GKPKLVKSVKM-NVDVISHG--P 276
Query: 728 KVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEV 760
G+ E G+ V V+ + ++D+ +++
Sbjct: 277 SQGKTY-KDENGRKVNVVNYVERNAFFDYISQL 308
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 67/156 (42%), Gaps = 28/156 (17%)
Query: 92 ISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSI 151
+S+ +T+ G T+ A + +N N+E + MGG
Sbjct: 117 MSSKKVTLLFTGPLTDLAKAIRHNDAFLANVEKLVWMGGTFLDK---------------- 160
Query: 152 GNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNT 211
GN+ + + AE+N F DP A TV S I + ++ L++T +P++ + R++
Sbjct: 161 GNVEEPEHDGTAEWNAFWDPEAVKTVFDSKIKIDMVALESTNQVPLTLDV-----RQRWA 215
Query: 212 YEAQYCFQSLKMIRDTWSGSPPF-----HEAYCMWD 242
E ++ + + +++ PP + Y +WD
Sbjct: 216 DEREHV--GIDFLGVSYAAVPPLTHFVTNSTYFLWD 249
>gi|154495800|ref|ZP_02034496.1| hypothetical protein BACCAP_00079 [Bacteroides capillosus ATCC
29799]
gi|150274998|gb|EDN02046.1| Inosine-uridine preferring nucleoside hydrolase
[Pseudoflavonifractor capillosus ATCC 29799]
Length = 320
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 70/152 (46%), Gaps = 30/152 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAG--PITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ R+ P +A +++ +S P+ + G TN A L+++
Sbjct: 88 VHGESGLDGPVLPEPDREPLPC---SAAELMAKVLSESKEPVYLVPTGPLTNVASLLLSH 144
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P LK+ I I +MGG I + GN P AEFNI DP AA
Sbjct: 145 PELKEKIGGISLMGGGI-----------------AHGNW-----TPAAEFNILVDPEAAD 182
Query: 176 TVLHSGIPVTIIPLDATKTIPVSENFFVEFER 207
V SG+P+T+ LD T+ + F +FER
Sbjct: 183 IVFRSGVPITMAGLDVTEKALI---FPEDFER 211
>gi|170692980|ref|ZP_02884141.1| Inosine/uridine-preferring nucleoside hydrolase [Burkholderia
graminis C4D1M]
gi|170141978|gb|EDT10145.1| Inosine/uridine-preferring nucleoside hydrolase [Burkholderia
graminis C4D1M]
Length = 238
Score = 58.5 bits (140), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 20/139 (14%)
Query: 72 GGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMG 129
G APL A + +I+++ A P +T+ +G TN A+ L ++P + ++ + VMG
Sbjct: 94 GDSAAAPLDPRPAHRFIIDSVRAHPGEVTLLAVGPLTNLALALADDPQIAPLVKQVVVMG 153
Query: 130 GAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPL 189
GA ++ +GN+ P AE NI DP AA V + PV I+ L
Sbjct: 154 GAFGTE-------------GVLGNV-----TPAAEANILGDPDAADIVFGAPWPVAIVGL 195
Query: 190 DATKTIPVSENFFVEFERR 208
D T+ +S+ + R
Sbjct: 196 DVTQRTIMSQEYLASIRDR 214
Score = 46.2 bits (108), Expect = 0.080, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
Query: 554 IVESIE--PGSKITILTNGPLTNLAQIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTV 610
I++S+ PG ++T+L GPLTNLA + + +++ V ++GG G + GNV
Sbjct: 110 IIDSVRAHPG-EVTLLAVGPLTNLALALADDPQIAPLVKQVVVMGGAFGTEGVLGNV--- 165
Query: 611 PSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDR 661
+ AE N+ DP AA VF + + ++ L + +R + L +RDR
Sbjct: 166 --TPAAEANILGDPDAADIVFGAPWPVAIVGLDVTQRTIMSQEYLASIRDR 214
>gi|118399597|ref|XP_001032123.1| Inosine-uridine preferring nucleoside hydrolase family protein
[Tetrahymena thermophila]
gi|89286461|gb|EAR84460.1| Inosine-uridine preferring nucleoside hydrolase family protein
[Tetrahymena thermophila SB210]
Length = 323
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 25/151 (16%)
Query: 63 GLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFV-MGSHTNFAIFLMNNPHLKKN 121
GL LP +K + + Q+ + S FV G TN A+ L P K
Sbjct: 91 GLDGCVLPDTDQK--AITEDVLHQIYLKIKSLPKKIHFVATGCLTNLALLLSTFPDFKDY 148
Query: 122 IEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSG 181
IE I +MGGAI IGN +P +EFNI DP A+ + SG
Sbjct: 149 IEQISLMGGAI-----------------GIGNWFP-----CSEFNIGIDPEASKIIFTSG 186
Query: 182 IPVTIIPLDATKTIPVSENFFVEFERRQNTY 212
+P+T++P++ T + ++E+ F + + + +
Sbjct: 187 LPLTMVPIELTHQVSITEDIFDKLKAMKTHF 217
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 17/129 (13%)
Query: 563 KITILTNGPLTNLAQIIG-LQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMF 621
KI + G LTNLA ++ + I+ + ++GG G GN F P S EFN+
Sbjct: 123 KIHFVATGCLTNLALLLSTFPDFKDYIEQISLMGGAIGI----GNWF--PCS---EFNIG 173
Query: 622 LDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQ 681
+DP A+K +F S L + ++P+ + +V+ I + D+ K ++ F + ++ GLMT
Sbjct: 174 IDPEASKIIFTSGLPLTMVPIELTHQVS----ITEDIFDKLKAMKTHFGENIV-GLMTFF 228
Query: 682 QSHHSYHHV 690
+ H+Y V
Sbjct: 229 K--HTYKTV 235
>gi|408379941|ref|ZP_11177532.1| inosine-uridine preferring nucleoside hydrolase [Agrobacterium
albertimagni AOL15]
gi|407746318|gb|EKF57843.1| inosine-uridine preferring nucleoside hydrolase [Agrobacterium
albertimagni AOL15]
Length = 314
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 62/139 (44%), Gaps = 27/139 (19%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAIS---AGPITVFVMGSHTNFAIFLM 113
+V+ GL A LP+ ++ A +I I G +T+ +G TN + L
Sbjct: 83 HVHGKTGLDGAVLPE---PTMVVQSRHAVDFIIETIRNEPVGTVTLCTLGPLTNIGLALQ 139
Query: 114 NNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFA 173
P + ++ + +MGG GN+ P AEFNI+ DP A
Sbjct: 140 KAPDIAPRVKELVMMGGGFSEG----------------GNI-----TPAAEFNIYVDPHA 178
Query: 174 AYTVLHSGIPVTIIPLDAT 192
A VL SG+PVTI+PLD T
Sbjct: 179 AAAVLGSGMPVTIMPLDVT 197
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 67/125 (53%), Gaps = 15/125 (12%)
Query: 554 IVESI--EPGSKITILTNGPLTNLAQIIGLQNSSSV---IQDVYIVGGNKGQDNEKGNVF 608
I+E+I EP +T+ T GPLTN+ + LQ + + ++++ ++GG +E GN+
Sbjct: 111 IIETIRNEPVGTVTLCTLGPLTNIG--LALQKAPDIAPRVKELVMMGGGF---SEGGNI- 164
Query: 609 TVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESV 668
+ AEFN+++DP AA AV S + + ++PL + ++ + + ++ P V
Sbjct: 165 ----TPAAEFNIYVDPHAAAAVLGSGMPVTIMPLDVTHQLMTTKARVARMAALGTKPAKV 220
Query: 669 FSQRL 673
+ L
Sbjct: 221 MVEWL 225
>gi|445060066|ref|YP_007385470.1| ribonucleoside hydrolase RihC [Staphylococcus warneri SG1]
gi|443426123|gb|AGC91026.1| ribonucleoside hydrolase RihC [Staphylococcus warneri SG1]
Length = 302
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 67/119 (56%), Gaps = 12/119 (10%)
Query: 547 AVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEKG 605
A++ K++++ E S ITI+ GPLTN+A ++ S I+ + I+GG+ G +G
Sbjct: 104 AIEAMKNVLK--ESTSPITIVAIGPLTNIALLLATYPEIKSKIKQIVIMGGSSG----RG 157
Query: 606 NVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKT 664
NV + AEFN++ DP AA VF S+L + +I L + R+ + + K++ +T
Sbjct: 158 NV-----TPLAEFNIYCDPEAANIVFNSQLPLVMIGLDLARQAMFSHEFIEKIKATNQT 211
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 23/138 (16%)
Query: 74 RKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIR 133
K +P+ A + ++ S PIT+ +G TN A+ L P +K I+ I +MGG+
Sbjct: 97 EKISPMNAIEAMKNVLKE-STSPITIVAIGPLTNIALLLATYPEIKSKIKQIVIMGGS-- 153
Query: 134 SDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
GN+ P AEFNI+ DP AA V +S +P+ +I LD +
Sbjct: 154 ---------------SGRGNV-----TPLAEFNIYCDPEAANIVFNSQLPLVMIGLDLAR 193
Query: 194 TIPVSENFFVEFERRQNT 211
S F + + T
Sbjct: 194 QAMFSHEFIEKIKATNQT 211
>gi|417645044|ref|ZP_12294983.1| cytidine/uridine-specific hydrolase [Staphylococcus warneri VCU121]
gi|330684201|gb|EGG95945.1| cytidine/uridine-specific hydrolase [Staphylococcus epidermidis
VCU121]
Length = 302
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 67/119 (56%), Gaps = 12/119 (10%)
Query: 547 AVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEKG 605
A++ K++++ E S ITI+ GPLTN+A ++ S I+ + I+GG+ G +G
Sbjct: 104 AIEAMKNVLK--ESTSPITIVAIGPLTNIALLLATYPEIKSKIKQIVIMGGSSG----RG 157
Query: 606 NVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKT 664
NV + AEFN++ DP AA VF S+L + +I L + R+ + + K++ +T
Sbjct: 158 NV-----TPLAEFNIYCDPEAANIVFNSQLPLVMIGLDLARQAMFSHEFIEKIKATNQT 211
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 72/172 (41%), Gaps = 32/172 (18%)
Query: 74 RKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIR 133
K +P+ A + ++ S PIT+ +G TN A+ L P +K I+ I +MGG+
Sbjct: 97 EKISPMNAIEAMKNVLKE-STSPITIVAIGPLTNIALLLATYPEIKSKIKQIVIMGGS-- 153
Query: 134 SDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
GN+ P AEFNI+ DP AA V +S +P+ +I LD +
Sbjct: 154 ---------------SGRGNV-----TPLAEFNIYCDPEAANIVFNSQLPLVMIGLDLAR 193
Query: 194 TIPVSENFFVEFERRQNTYEA-QYCFQSLKMIRDTWSGSPPFHEAYCMWDSF 244
S F + + T + FQ + + HE ++D F
Sbjct: 194 QAMFSHEFIEKIKATNQTGDMLSQLFQHYR--------TENVHEGLKLYDVF 237
>gi|291564027|emb|CBL42843.1| Inosine-uridine nucleoside N-ribohydrolase [butyrate-producing
bacterium SS3/4]
Length = 211
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 22/97 (22%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
+++ +G TN A L+ P LKK I I +MGGA + C N +
Sbjct: 117 VSLVAIGPLTNVAQALLKEPELKKRIPEILIMGGA--AFCGNQS---------------- 158
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
P AEFNI +DP AA V+ SGIP+ + L+AT+
Sbjct: 159 ----PVAEFNIAADPEAAKIVMESGIPIRMFGLNATR 191
Score = 42.7 bits (99), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 92/240 (38%), Gaps = 54/240 (22%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
+V D D D ALI +K +++ GI+ T + + GR DI
Sbjct: 6 IVIDCDPGIDDTFALILCIKK----LDVAGIVAVGGNTGLQFTSRNARYVTELTGRTDIS 61
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V G P +G A+ + G GG D D +P ++ E+
Sbjct: 62 VYAG---------YDQPILGNAVRAEYVH-GVGGLGDLD--------IPEQKKQLEKEHG 103
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQ-IIGLQNSSSV 587
V F ++ + + ++++ GPLTN+AQ ++
Sbjct: 104 VDF----------------------LIRTFMNENDVSLVAIGPLTNVAQALLKEPELKKR 141
Query: 588 IQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
I ++ I+GG F S AEFN+ DP AAK V ES + I++ L+ R+
Sbjct: 142 IPEILIMGGA---------AFCGNQSPVAEFNIAADPEAAKIVMESGIPIRMFGLNATRQ 192
>gi|354595512|ref|ZP_09013529.1| Ribosylpyrimidine nucleosidase [Brenneria sp. EniD312]
gi|353673447|gb|EHD19480.1| Ribosylpyrimidine nucleosidase [Brenneria sp. EniD312]
Length = 313
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 22/117 (18%)
Query: 90 NAISAG-PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQC 148
A +AG P+T+ +G TN A L+ P + IE I +MGGA R S S
Sbjct: 114 KAAAAGRPLTLCTLGPLTNLATALLMKPSIAAGIERIVMMGGAYREAGNRSLTS------ 167
Query: 149 DSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEF 205
EFN+ +DP AA+ V S I + +PLDAT + ++ + F
Sbjct: 168 ---------------EFNMLADPHAAHVVFSSSIAIVALPLDATHQVILTPDHVARF 209
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 99/243 (40%), Gaps = 50/243 (20%)
Query: 408 PVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDI 467
P++ D D D +AL+ P +++ GI TV + + R DI
Sbjct: 5 PIIIDCDPGIDDAIALLSAFVAPE--LDILGICAVCGNQPLERTVRNALQITELGRRTDI 62
Query: 468 PVGLGDVFAVGEVNPKF-PPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAE 526
PV G P F P+ G + ++ G G + LP +R A+
Sbjct: 63 PV------YAGCHRPLFRQPLHGQFHGES---GLGNTV-----------LPSPQKRAEAQ 102
Query: 527 NSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS-S 585
++V F + + ++ G +T+ T GPLTNLA + ++ S +
Sbjct: 103 HAVSF------------------IIELCEKAAAAGRPLTLCTLGPLTNLATALLMKPSIA 144
Query: 586 SVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQ 645
+ I+ + ++GG E GN S +EFNM DP AA VF S + I +PL
Sbjct: 145 AGIERIVMMGGAY---REAGN-----RSLTSEFNMLADPHAAHVVFSSSIAIVALPLDAT 196
Query: 646 RRV 648
+V
Sbjct: 197 HQV 199
>gi|290957503|ref|YP_003488685.1| nucleoside hydrolase [Streptomyces scabiei 87.22]
gi|260647029|emb|CBG70128.1| putative nucleoside hydrolase [Streptomyces scabiei 87.22]
Length = 329
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 21/98 (21%)
Query: 95 GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNL 154
G +TV G TN A+ L+ +P + + MGGA +
Sbjct: 121 GELTVCATGPLTNVAVALLEDPGFARRVGRFVFMGGAAQ--------------------- 159
Query: 155 YPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
P + P AEFNI++DP AA VL SGIP T++ LDA+
Sbjct: 160 VPGNITPVAEFNIWADPDAAEVVLSSGIPFTMVDLDAS 197
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 67/177 (37%), Gaps = 14/177 (7%)
Query: 511 GLARDLPRSPRRYTAENSVRFGASQDN-DDPELRQPLAVDVWKSIVESIEPGSKITILTN 569
G R L R P R + R G + D P + S E ++T+
Sbjct: 69 GAGRTLSRLPYREASAFHGRAGLGNETLPDSTAPHPTESSAQALLRLSREYEGELTVCAT 128
Query: 570 GPLTNLAQIIGLQNSSSVIQDV--YIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAA 627
GPLTN+A + L + V ++ G Q GN+ V AEFN++ DP AA
Sbjct: 129 GPLTNVA--VALLEDPGFARRVGRFVFMGGAAQ--VPGNITPV-----AEFNIWADPDAA 179
Query: 628 KAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSH 684
+ V S + ++ L R F+ P + + RL++ M H
Sbjct: 180 EVVLSSGIPFTMVDLDASHRW--LFRPADLAALEAAGPGTALAARLMRTYMDAYSRH 234
>gi|386829920|ref|YP_006236574.1| putative inosine-uridine preferring nucleoside hydrolase
[Staphylococcus aureus subsp. aureus HO 5096 0412]
gi|417798323|ref|ZP_12445497.1| cytidine/uridine-specific hydrolase [Staphylococcus aureus subsp.
aureus 21310]
gi|418656460|ref|ZP_13218272.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus IS-105]
gi|334276437|gb|EGL94699.1| cytidine/uridine-specific hydrolase [Staphylococcus aureus subsp.
aureus 21310]
gi|375033683|gb|EHS26867.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus IS-105]
gi|385195312|emb|CCG14920.1| putative inosine-uridine preferring nucleoside hydrolase
[Staphylococcus aureus subsp. aureus HO 5096 0412]
Length = 311
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 34/173 (19%)
Query: 78 PLRQPTA---QQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAI 132
P RQ A ++IN + S P+T+ G TN A L+ P + ++IE I +MGG
Sbjct: 97 PSRQAVAMPASDMIINKVMTSDTPVTIVATGPLTNVATALIREPRIAEHIESITLMGGG- 155
Query: 133 RSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
+ GN P AEFNI+ D AA V SGI + + LD T
Sbjct: 156 -----------------TFGNW-----TPTAEFNIWVDAEAAKRVFESGITINVFGLDVT 193
Query: 193 KTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWS-----GSPPFHEAYCM 240
+ ++++ +E N AQ+ + L+ + T+ P H+A +
Sbjct: 194 HQV-LADDLVIERFESINNPVAQFVVELLQFFKKTYKTHFNMDGGPIHDACTI 245
Score = 46.2 bits (108), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 117/287 (40%), Gaps = 63/287 (21%)
Query: 405 MGKPVVFDIDMSAGDFLALIYL--LKLPVELINLKGILVSSTGWATSATVDV----VYDL 458
M + ++ D D D +ALI + P+E++ + + A + +VD ++
Sbjct: 1 MKRKIIMDCDPGHDDAIALILAGAIDSPLEILAVTTV-------AGNQSVDKNTTNALNV 53
Query: 459 LHMMGRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPR 518
L +MGR DI V G P I +A I SG LD LP
Sbjct: 54 LDIMGRQDIAVAKG---------ADRPLIKSAAFASEIHGESG--LD-------GPKLPS 95
Query: 519 SPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQ- 577
+P R + P + + ++ S P +TI+ GPLTN+A
Sbjct: 96 TPSRQA-----------------VAMPASDMIINKVMTSDTP---VTIVATGPLTNVATA 135
Query: 578 IIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEI 637
+I + I+ + ++GG GN + AEFN+++D AAK VFES + I
Sbjct: 136 LIREPRIAEHIESITLMGGGTF-----GN-----WTPTAEFNIWVDAEAAKRVFESGITI 185
Query: 638 KLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSH 684
+ L + +V + ++ + + P + F LLQ ++H
Sbjct: 186 NVFGLDVTHQVLADDLVIERF-ESINNPVAQFVVELLQFFKKTYKTH 231
>gi|291457392|ref|ZP_06596782.1| cytidine/uridine-specific hydrolase [Bifidobacterium breve DSM
20213 = JCM 1192]
gi|322691680|ref|YP_004221250.1| ribonucleoside hydrolase [Bifidobacterium longum subsp. longum JCM
1217]
gi|384201005|ref|YP_005586752.1| ribonucleoside hydrolase [Bifidobacterium longum subsp. longum KACC
91563]
gi|291381227|gb|EFE88745.1| cytidine/uridine-specific hydrolase [Bifidobacterium breve DSM
20213 = JCM 1192]
gi|320456536|dbj|BAJ67158.1| ribonucleoside hydrolase [Bifidobacterium longum subsp. longum JCM
1217]
gi|338754012|gb|AEI97001.1| ribonucleoside hydrolase [Bifidobacterium longum subsp. longum KACC
91563]
Length = 306
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 48/99 (48%), Gaps = 22/99 (22%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
SA P+TV +G TN A+ L P +K IE I +MGG++ G
Sbjct: 116 SAEPVTVMPIGPLTNIALLLKTFPEVKSRIERIVLMGGSVTR-----------------G 158
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDA 191
N AEFNIF DP AA VL SG+ +T+ LDA
Sbjct: 159 N-----KGVMAEFNIFVDPEAAKIVLTSGLDITMATLDA 192
Score = 46.6 bits (109), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 19/112 (16%)
Query: 538 DDPELRQPLAVD------VWKSIVESIEPGSKITILTNGPLTNLAQII-GLQNSSSVIQD 590
D PE + L +D + I+ S EP +T++ GPLTN+A ++ S I+
Sbjct: 91 DFPEPKTELLLDKHAVEAMRDEIMASAEP---VTVMPIGPLTNIALLLKTFPEVKSRIER 147
Query: 591 VYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+ ++GG+ + N+ AEFN+F+DP AAK V S L+I + L
Sbjct: 148 IVLMGGSVTRGNK---------GVMAEFNIFVDPEAAKIVLTSGLDITMATL 190
>gi|163751400|ref|ZP_02158625.1| hypothetical inosine-uridine preferring nucleoside hydrolase
[Shewanella benthica KT99]
gi|161328703|gb|EDP99851.1| hypothetical inosine-uridine preferring nucleoside hydrolase
[Shewanella benthica KT99]
Length = 323
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 70/156 (44%), Gaps = 27/156 (17%)
Query: 51 PVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNF 108
PVG + V+ GL P A R A Q +I+A+ A P IT+ +G TN
Sbjct: 74 PVGATVVVHGESGLGDVLAPAELSVKADPR--PAYQYIIDALRAEPGEITLVAVGPLTNL 131
Query: 109 AIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIF 168
A+ L P + ++ + VMGGA + D GN+ PYAE NI
Sbjct: 132 ALALEAAPEIVTLVKEVVVMGGAFGVN-------------DHRGNV-----TPYAEANIH 173
Query: 169 SDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVE 204
DP AA V + PV II LD T+ ++FF +
Sbjct: 174 DDPHAADIVFGASWPVVIIGLDVTE-----QSFFTK 204
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 69/117 (58%), Gaps = 17/117 (14%)
Query: 551 WKSIVESI--EPGSKITILTNGPLTNLAQIIGLQNSSSV---IQDVYIVGGNKGQDNEKG 605
++ I++++ EPG +IT++ GPLTNLA + L+ + + +++V ++GG G ++ +G
Sbjct: 106 YQYIIDALRAEPG-EITLVAVGPLTNLA--LALEAAPEIVTLVKEVVVMGGAFGVNDHRG 162
Query: 606 NVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFK--ILHKLRD 660
NV + YAE N+ DP AA VF + + +I L + + SFF L +LRD
Sbjct: 163 NV-----TPYAEANIHDDPHAADIVFGASWPVVIIGLDVTEQ--SFFTKDYLDRLRD 212
>gi|75909279|ref|YP_323575.1| inosine/uridine-preferring nucleoside hydrolase [Anabaena
variabilis ATCC 29413]
gi|75703004|gb|ABA22680.1| Inosine/uridine-preferring nucleoside hydrolase [Anabaena
variabilis ATCC 29413]
Length = 389
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 126/300 (42%), Gaps = 55/300 (18%)
Query: 397 KPDFGKKLMGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVY 456
+P P++ D D S AL Y+L P +++ I ++ G A + V
Sbjct: 27 QPVLAASFKPTPLIIDDDGSQDGMTALAYMLANPK--FDVQAITIAQ-GIARPESF--VN 81
Query: 457 DLLHMMGR---DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA 513
+L M+GR IPVG+G P G + + I G+ DT +
Sbjct: 82 NLERMLGRLNASGIPVGIGR---------STPLAGNNTFPEFIRTGA------DTFWSPF 126
Query: 514 RDLPRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLT 573
LP D P + +P A + + + +S+ P + IL G LT
Sbjct: 127 VQLP------------------DTAPPIVTRPAAELIVEKVKQSLAP---VAILATGSLT 165
Query: 574 NLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKY-----AEFNMFLDPLAAK 628
N+A+ + L + + + G G GN+ +P + AEFN+++DPLAA+
Sbjct: 166 NIAEALRLDPTIINNIAIIEIMG--GAVFVPGNLPVLPDPPFSTNTTAEFNIWVDPLAAQ 223
Query: 629 AVFES---KLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHH 685
VF + L+I+L PL ++A F + + TPES + L +T+ QS++
Sbjct: 224 EVFAAGGQGLKIQLTPLDATNQIA-FSRADQQAWLATATPESKLAAEFLDFALTIIQSNN 282
Score = 43.1 bits (100), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 52/115 (45%), Gaps = 24/115 (20%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
S P+ + GS TN A L +P + NI I +MGGA+ G
Sbjct: 152 SLAPVAILATGSLTNIAEALRLDPTIINNIAIIEIMGGAVFVP----------------G 195
Query: 153 NL--YPD---DSNPYAEFNIFSDPFAAYTVLHS---GIPVTIIPLDATKTIPVSE 199
NL PD +N AEFNI+ DP AA V + G+ + + PLDAT I S
Sbjct: 196 NLPVLPDPPFSTNTTAEFNIWVDPLAAQEVFAAGGQGLKIQLTPLDATNQIAFSR 250
>gi|116334629|ref|YP_796156.1| ribonucleoside hydrolase RihC [Lactobacillus brevis ATCC 367]
gi|116099976|gb|ABJ65125.1| Inosine-uridine nucleoside N-ribohydrolase [Lactobacillus brevis
ATCC 367]
Length = 304
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 25/117 (21%)
Query: 78 PLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSD 135
PL + TA + L + I S+ P+T+ GS+TN A+ P +K +I+ I MGGA+
Sbjct: 98 PLNK-TAVEALHDEIMASSDPVTLVPTGSYTNIALLFSEYPEVKSHIDRIVAMGGALGK- 155
Query: 136 CFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
GN+ AEFN+F+DP AA V SG+P+ ++ LD T
Sbjct: 156 ----------------GNM-----TSAAEFNVFTDPDAAAIVYKSGVPIVMVGLDIT 191
>gi|283834049|ref|ZP_06353790.1| cytidine/uridine-specific hydrolase [Citrobacter youngae ATCC
29220]
gi|291070192|gb|EFE08301.1| cytidine/uridine-specific hydrolase [Citrobacter youngae ATCC
29220]
Length = 311
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 22/100 (22%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
S P+T+ G TN A+ L ++P L I I +MGGA+ +G
Sbjct: 115 SPEPLTIVSTGPQTNVALLLNSHPELHAKIARIVIMGGAM-----------------GLG 157
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
N P AEFNI+ DP AA V SGIPV + LD T
Sbjct: 158 NW-----TPAAEFNIYVDPEAAEIVFQSGIPVVMAGLDVT 192
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 105/252 (41%), Gaps = 67/252 (26%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++FD D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILFDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPDKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV A G V P L RDL
Sbjct: 59 TDIPV------AGGAVKP-----------------------------LMRDL------II 77
Query: 525 AENSVRFGASQDNDDPELRQP-------LAVDVW-KSIVESIEPGSKITILTNGPLTNLA 576
A+N D P L +P AV++ K++ ES EP +TI++ GP TN+A
Sbjct: 78 ADN---VHGESGLDGPALPEPAFTPQSCTAVELMAKTLRESPEP---LTIVSTGPQTNVA 131
Query: 577 QIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ + I + I+GG G N + AEFN+++DP AA+ VF+S +
Sbjct: 132 LLLNSHPELHAKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGI 182
Query: 636 EIKLIPLHMQRR 647
+ + L + +
Sbjct: 183 PVVMAGLDVTHK 194
>gi|146277154|ref|YP_001167313.1| inosine/uridine-preferring nucleoside hydrolase [Rhodobacter
sphaeroides ATCC 17025]
gi|145555395|gb|ABP70008.1| Inosine/uridine-preferring nucleoside hydrolase [Rhodobacter
sphaeroides ATCC 17025]
Length = 315
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 75/193 (38%), Gaps = 32/193 (16%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP---ITVFVMGSHTNFAIFLM 113
+V+ GL LP PL+ A LI + P +T+ +G TN A L
Sbjct: 82 HVHGKTGLDGPALPD---PTMPLQDRHAVDFLIETLRTEPEGSVTLCPLGPLTNIATALQ 138
Query: 114 NNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFA 173
P + I I +MGGA +GN+ P AEFNI+ DP A
Sbjct: 139 RAPDIAPRIREIVLMGGAYFE----------------VGNI-----TPSAEFNIYVDPEA 177
Query: 174 AYTVLHSGIPVTIIPLDATK---TIPVSENFFVEFERRQNTYEAQYC--FQSLKMIRDTW 228
A V +G+P+ ++PLD T T P F E R A++ F+ +
Sbjct: 178 AAIVFGAGVPLVVMPLDVTHKALTSPARVRRFREMGTRPGRMVAEWTDFFERFDREKYGA 237
Query: 229 SGSPPFHEAYCMW 241
G+P W
Sbjct: 238 EGAPLHDPCVIAW 250
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 65/123 (52%), Gaps = 15/123 (12%)
Query: 554 IVESI--EPGSKITILTNGPLTNLAQIIGLQNSSSV---IQDVYIVGGNKGQDNEKGNVF 608
++E++ EP +T+ GPLTN+A LQ + + I+++ ++GG E GN+
Sbjct: 110 LIETLRTEPEGSVTLCPLGPLTNIAT--ALQRAPDIAPRIREIVLMGGAY---FEVGNI- 163
Query: 609 TVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESV 668
+ AEFN+++DP AA VF + + + ++PL + + + + + R+ P +
Sbjct: 164 ----TPSAEFNIYVDPEAAAIVFGAGVPLVVMPLDVTHKALTSPARVRRFREMGTRPGRM 219
Query: 669 FSQ 671
++
Sbjct: 220 VAE 222
>gi|358064548|ref|ZP_09151119.1| hypothetical protein HMPREF9473_03182 [Clostridium hathewayi
WAL-18680]
gi|356697282|gb|EHI58870.1| hypothetical protein HMPREF9473_03182 [Clostridium hathewayi
WAL-18680]
Length = 317
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 27/192 (14%)
Query: 63 GLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVM--GSHTNFAIFLMNNPHLKK 120
G + FLP+ PL + A ++I+ + P ++++ G +N A+ + P +K
Sbjct: 87 GQAENFLPE---PVTPLCEKHAVDLIIDLVKEYPNEIYILSTGPMSNLAMAMKKAPEIKG 143
Query: 121 NIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHS 180
I IY + G + + N++ P +E+N++ DP AA V HS
Sbjct: 144 MIAGIYAISGMFGQNPYAFANAT--------------GDTPQSEWNVYVDPEAASIVYHS 189
Query: 181 GIPVTIIPLDATKTIPVS-ENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPFHEAYC 239
G+ + + LD V+ +E RR + EA++ +QS + +++ EAYC
Sbjct: 190 GVRLVALGLDVATHFDVNLTEEDLERLRRSDRREAKFLYQSTQFVKNRG------FEAYC 243
Query: 240 -MWDSFMAGVAL 250
+ D G A+
Sbjct: 244 AVIDCMAVGYAI 255
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 116/274 (42%), Gaps = 67/274 (24%)
Query: 406 GKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRD 465
K ++ D D D +A++ +K P +++K I + + T +L ++GR
Sbjct: 3 AKKIILDCDPGMDDSMAIVMAVKAP--QLDVKAITTVNGNYPVDVTAGNALKMLELLGRT 60
Query: 466 DIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTA 525
DIPV A G P F R+ P+ P +
Sbjct: 61 DIPV------ARGMAEPMF-----------------------------RESPKDPFTHGK 85
Query: 526 ENSVRFGASQDNDDPELRQPL----AVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGL 581
+ +N PE PL AVD+ +V+ E ++I IL+ GP++NLA + +
Sbjct: 86 DGQA------ENFLPEPVTPLCEKHAVDLIIDLVK--EYPNEIYILSTGPMSNLA--MAM 135
Query: 582 QNSSSV---IQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIK 638
+ + + I +Y + G GQ N + +E+N+++DP AA V+ S ++
Sbjct: 136 KKAPEIKGMIAGIYAISGMFGQ-NPYAFANATGDTPQSEWNVYVDPEAASIVYHSG--VR 192
Query: 639 LIPLHMQRRVASFFKI------LHKLR--DRKKT 664
L+ L + VA+ F + L +LR DR++
Sbjct: 193 LVALGLD--VATHFDVNLTEEDLERLRRSDRREA 224
>gi|433463354|ref|ZP_20420911.1| inosine-uridine preferring nucleoside hydrolase [Halobacillus sp.
BAB-2008]
gi|432187653|gb|ELK44921.1| inosine-uridine preferring nucleoside hydrolase [Halobacillus sp.
BAB-2008]
Length = 312
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 78/176 (44%), Gaps = 31/176 (17%)
Query: 74 RKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGA 131
R+ P+ P A + L++ + S P+T+ +G T+ A L +P ++ NIE + MGG
Sbjct: 98 RQSEPVGVP-AHEHLVDKVTESKEPVTLVFIGPLTDLARALQLSPEIESNIERLVWMGGT 156
Query: 132 IRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDA 191
+ GN+ + + AE+N + DP AA V S IP+ ++ L++
Sbjct: 157 FLEE----------------GNVEEPEHDGTAEWNAYWDPEAAARVWESSIPIDLVALES 200
Query: 192 TKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPF-----HEAYCMWD 242
T +P++ ++ ++ + Q M+ PP + Y +WD
Sbjct: 201 TNMVPLTPEVRQDWASKREDIGIDFLGQCYAMV-------PPLVHFQTNSTYFLWD 249
Score = 45.8 bits (107), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 554 IVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSS 613
+ ES EP +T++ GPLT+LA+ LQ S + ++ + G E+GNV
Sbjct: 115 VTESKEP---VTLVFIGPLTDLAR--ALQLSPEIESNIERLVWMGGTFLEEGNVEEPEHD 169
Query: 614 KYAEFNMFLDPLAAKAVFESKLEIKLIPLH 643
AE+N + DP AA V+ES + I L+ L
Sbjct: 170 GTAEWNAYWDPEAAARVWESSIPIDLVALE 199
>gi|254249870|ref|ZP_04943190.1| Inosine-uridine nucleoside N-ribohydrolase [Burkholderia
cenocepacia PC184]
gi|124876371|gb|EAY66361.1| Inosine-uridine nucleoside N-ribohydrolase [Burkholderia
cenocepacia PC184]
Length = 350
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 59/133 (44%), Gaps = 24/133 (18%)
Query: 77 APLRQPTAQQVLINAIS-AGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIR 133
APL A LI+ +S A P +T+ +G TN A L+ P ++ + I +MGGA
Sbjct: 135 APLAAGHAVSYLIDTLSRAAPNSVTLCALGPLTNIATALVEAPQIRAALREIVLMGGAF- 193
Query: 134 SDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
F N + P AEFNI+ DP AA V SG+P+ ++P D
Sbjct: 194 ---FERGNIT-----------------PAAEFNIYVDPQAADVVFGSGVPIVVLPRDVAV 233
Query: 194 TIPVSENFFVEFE 206
P++ F
Sbjct: 234 KAPITPARVAPFR 246
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 9/81 (11%)
Query: 562 SKITILTNGPLTNLAQ-IIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNM 620
+ +T+ GPLTN+A ++ + ++++ ++GG E+GN+ + AEFN+
Sbjct: 156 NSVTLCALGPLTNIATALVEAPQIRAALREIVLMGG---AFFERGNI-----TPAAEFNI 207
Query: 621 FLDPLAAKAVFESKLEIKLIP 641
++DP AA VF S + I ++P
Sbjct: 208 YVDPQAADVVFGSGVPIVVLP 228
>gi|27468775|ref|NP_765412.1| IAG-nucleoside hydrolase [Staphylococcus epidermidis ATCC 12228]
gi|418607984|ref|ZP_13171202.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis VCU057]
gi|27316323|gb|AAO05498.1|AE016750_103 inosine-adenosine-guanosine-nucleoside hydrolase [Staphylococcus
epidermidis ATCC 12228]
gi|374403145|gb|EHQ74154.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis VCU057]
Length = 313
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 97/198 (48%), Gaps = 10/198 (5%)
Query: 563 KITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFL 622
K+T+L GPLT+LA+ I NS +++++ + G +KGNV AE+N F
Sbjct: 120 KVTLLFTGPLTDLAKAIKYDNS--ILKNIEKLVWMGGTFLDKGNVEEPEHDGTAEWNAFW 177
Query: 623 DPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQ 682
DP A K V +S + + ++ L +V ++ D+++ F L +
Sbjct: 178 DPEAVKVVLDSDMNVDIVALESTNQVPLTMEVRQMWADKRQYLGVDF---LGTSYAAVPP 234
Query: 683 SHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLV 742
H + FL +VL + G+P+L ++ K+K ++++S G G+ E G+ V
Sbjct: 235 LTHFVTNSTYFLWDVLTTAYV-GSPNLVESTKLK-IDVVSQG--PSQGRTF-QSEYGREV 289
Query: 743 KVLESLNVAVYYDHFAEV 760
+++ +N ++++ ++
Sbjct: 290 QIITDVNKQAFFNYITDL 307
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 28/151 (18%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
+T+ G T+ A + + + KNIE + MGG GN+
Sbjct: 121 VTLLFTGPLTDLAKAIKYDNSILKNIEKLVWMGGTFLDK----------------GNVEE 164
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQY 216
+ + AE+N F DP A VL S + V I+ L++T +P++ E RQ + +
Sbjct: 165 PEHDGTAEWNAFWDPEAVKVVLDSDMNVDIVALESTNQVPLT------MEVRQ-MWADKR 217
Query: 217 CFQSLKMIRDTWSGSPPF-----HEAYCMWD 242
+ + + +++ PP + Y +WD
Sbjct: 218 QYLGVDFLGTSYAAVPPLTHFVTNSTYFLWD 248
>gi|406989622|gb|EKE09390.1| hypothetical protein ACD_16C00189G0015 [uncultured bacterium]
Length = 324
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
+T+ G TN A+ ++ P + NI+ I MGG++ +GN+
Sbjct: 122 VTLATTGPLTNIAVAIVREPRILNNIDQIVTMGGSML-----------------LGNI-- 162
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQN 210
P AE+N ++DP AA+ +L SG P+T++ LD T I S + E + +N
Sbjct: 163 ---TPAAEYNFYADPEAAHILLTSGKPLTLVGLDVTHQILTSPEWLSELKALEN 213
>gi|417885051|ref|ZP_12529211.1| putative cytidine/uridine-specific hydrolase [Lactobacillus oris
F0423]
gi|341596640|gb|EGS39234.1| putative cytidine/uridine-specific hydrolase [Lactobacillus oris
F0423]
Length = 313
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 60/121 (49%), Gaps = 23/121 (19%)
Query: 73 GRKYAPLRQPTAQQVLINAISA-GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGA 131
G Y + TA + L +AI A +T+ GS+TN A+ P +K +I+ I MGG+
Sbjct: 92 GNDYGQPIKKTAVEALHDAIMAEDEVTLVPTGSYTNIALLFSEYPEVKSHIKRIVAMGGS 151
Query: 132 IRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDA 191
+ S GN+ AEFN+F+DP AA + +SGIP+ ++ LD
Sbjct: 152 M-----------------SGGNM-----TSVAEFNVFTDPDAARIMYNSGIPIVMVGLDV 189
Query: 192 T 192
T
Sbjct: 190 T 190
Score = 40.0 bits (92), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 16/137 (11%)
Query: 544 QPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIG-LQNSSSVIQDVYIVGGNKGQDN 602
QP+ +++ ++I ++T++ G TN+A + S I+ + +GG+
Sbjct: 97 QPIKKTAVEALHDAIMAEDEVTLVPTGSYTNIALLFSEYPEVKSHIKRIVAMGGSM---- 152
Query: 603 EKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRK 662
GN+ +V AEFN+F DP AA+ ++ S + I ++ L + + + KL
Sbjct: 153 SGGNMTSV-----AEFNVFTDPDAARIMYNSGIPIVMVGLDVTLKALLTKDTIEKLGQMN 207
Query: 663 KTPESVFSQRLLQGLMT 679
KT E +L L+T
Sbjct: 208 KTGE------MLHALIT 218
>gi|297201098|ref|ZP_06918495.1| nucleoside hydrolase [Streptomyces sviceus ATCC 29083]
gi|297147805|gb|EDY56150.2| nucleoside hydrolase [Streptomyces sviceus ATCC 29083]
Length = 320
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 31/121 (25%)
Query: 79 LRQPTAQQVLINAI---------SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMG 129
L PT V ++A+ S P+T+ TN A+ L +P + +NIE I MG
Sbjct: 95 LPAPTRVAVDVDAVTLLRREILASPTPVTLIPTAPLTNIALLLRTHPDVVRNIERIVFMG 154
Query: 130 GAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPL 189
GA+ + GN + P AEFN++ DP AA +L +G+P+T+ L
Sbjct: 155 GAV-----------------ATGN-----ATPVAEFNVWHDPEAAAVLLTAGVPITMYGL 192
Query: 190 D 190
D
Sbjct: 193 D 193
>gi|168231676|ref|ZP_02656734.1| inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
gi|194470998|ref|ZP_03076982.1| inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|194457362|gb|EDX46201.1| inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|205333951|gb|EDZ20715.1| inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
Length = 311
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 59/128 (46%), Gaps = 33/128 (25%)
Query: 67 AFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEH 124
+F PQ G TA +++ + S+ P+T+ G TN A+ L ++P L I
Sbjct: 96 SFAPQSG---------TAVELMAKTLRESSQPVTIVSTGPQTNVALLLNSHPELHTKIAR 146
Query: 125 IYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPV 184
I +MGGA+ ++GN P AEFNI+ DP AA V SGI V
Sbjct: 147 IVIMGGAM-----------------TLGNW-----TPAAEFNIYVDPEAAEIVFQSGISV 184
Query: 185 TIIPLDAT 192
+ LD T
Sbjct: 185 AMAGLDVT 192
Score = 46.2 bits (108), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 105/257 (40%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + +K I S+ T+ V +L ++ R
Sbjct: 1 MALPIIIDCDPGHDDAIALVLALASPE--LEVKAITSSAGNQTPEKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 PDIPV------AGGAVKPLM----------------RELIIADNVHGESGLDGPALP--- 93
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
E S A Q EL K++ ES +P +TI++ GP TN+A ++
Sbjct: 94 --EPSF---APQSGTAVELMA-------KTLRESSQP---VTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+ I + I+GG N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHTKIARIVIMGGAMTLGN---------WTPAAEFNIYVDPEAAEIVFQSGISVAMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHAADIERFR 206
>gi|372281096|ref|ZP_09517132.1| inosine-uridine preferring nucleoside hydrolase [Oceanicola sp.
S124]
Length = 312
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 63/142 (44%), Gaps = 27/142 (19%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP---ITVFVMGSHTNFAIFLM 113
+V+ GL LP PL++ A +I + A P +T+ +G TN A
Sbjct: 81 HVHGKTGLNGPVLPD---PVMPLQEQHAVDFIIETLRAEPEGTVTLCPLGPLTNVATAFE 137
Query: 114 NNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFA 173
P + ++ I +MGGA +GN+ P AEFNI+ DP A
Sbjct: 138 RAPDIVSRVQEIVLMGGAYFE----------------VGNI-----TPAAEFNIYVDPEA 176
Query: 174 AYTVLHSGIPVTIIPLDATKTI 195
A V SG+P+ ++PLD T +
Sbjct: 177 ADIVFRSGVPLVVMPLDVTHKV 198
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 542 LRQPLAVDVWKSIVESI--EPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNK 598
L++ AVD I+E++ EP +T+ GPLTN+A + S +Q++ ++GG
Sbjct: 100 LQEQHAVDF---IIETLRAEPEGTVTLCPLGPLTNVATAFERAPDIVSRVQEIVLMGGAY 156
Query: 599 GQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKL 658
E GN+ + AEFN+++DP AA VF S + + ++PL + +V + + +
Sbjct: 157 ---FEVGNI-----TPAAEFNIYVDPEAADIVFRSGVPLVVMPLDVTHKVLATRPRIEAI 208
Query: 659 R 659
R
Sbjct: 209 R 209
>gi|418325891|ref|ZP_12937091.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis VCU071]
gi|365227238|gb|EHM68438.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis VCU071]
Length = 313
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 96/198 (48%), Gaps = 10/198 (5%)
Query: 563 KITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFL 622
K+T+L GPLT+LA+ I NS +++++ + G +KGNV AE+N F
Sbjct: 120 KVTLLFTGPLTDLAKAIKYDNS--ILKNIEKLVWMGGTFLDKGNVEEPEHDGTAEWNAFW 177
Query: 623 DPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQ 682
DP A K V +S + + ++ L +V ++ D+++ F L +
Sbjct: 178 DPEAVKVVLDSDMNVDIVALESTNQVPLTMEVRQMWADKRQYLGVDF---LGTSYAAVPP 234
Query: 683 SHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLV 742
H + FL +VL + G+P+L ++ K+K ++++S G G+ E G+ V
Sbjct: 235 LTHFVTNSTYFLWDVLTTAYV-GSPNLVESTKLK-IDVVSQG--PSQGRTF-QSENGREV 289
Query: 743 KVLESLNVAVYYDHFAEV 760
+V+ +N ++ + ++
Sbjct: 290 QVITDVNKQAFFKYITDL 307
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 28/151 (18%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
+T+ G T+ A + + + KNIE + MGG GN+
Sbjct: 121 VTLLFTGPLTDLAKAIKYDNSILKNIEKLVWMGGTFLDK----------------GNVEE 164
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQY 216
+ + AE+N F DP A VL S + V I+ L++T +P++ E RQ + +
Sbjct: 165 PEHDGTAEWNAFWDPEAVKVVLDSDMNVDIVALESTNQVPLT------MEVRQ-MWADKR 217
Query: 217 CFQSLKMIRDTWSGSPPF-----HEAYCMWD 242
+ + + +++ PP + Y +WD
Sbjct: 218 QYLGVDFLGTSYAAVPPLTHFVTNSTYFLWD 248
>gi|13472783|ref|NP_104350.1| nucleoside hydrolase [Mesorhizobium loti MAFF303099]
gi|14023530|dbj|BAB50136.1| nucleoside hydrolase [Mesorhizobium loti MAFF303099]
Length = 313
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 48/100 (48%), Gaps = 21/100 (21%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
+G IT+ +G TN A+ L+ P + I+ I +MGG F N +
Sbjct: 118 ESGTITLCPLGPLTNIALALIREPRIAPRIKEIVLMGGGF----FEGGNVT--------- 164
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
P AEFNI+ DP AA V SGIP+ ++PLD T
Sbjct: 165 --------PAAEFNIYVDPQAADLVFKSGIPIVMMPLDVT 196
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 14/122 (11%)
Query: 541 ELRQPLAVDVWKSIVESI--EPGSKITILTNGPLTNLA-QIIGLQNSSSVIQDVYIVGGN 597
+L++ AVD IVE++ E IT+ GPLTN+A +I + I+++ ++GG
Sbjct: 100 KLQEQYAVDF---IVETLMKEESGTITLCPLGPLTNIALALIREPRIAPRIKEIVLMGGG 156
Query: 598 KGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHK 657
E GNV + AEFN+++DP AA VF+S + I ++PL + + + K
Sbjct: 157 F---FEGGNV-----TPAAEFNIYVDPQAADLVFKSGIPIVMMPLDVTHKALTTTKRTQA 208
Query: 658 LR 659
R
Sbjct: 209 FR 210
>gi|420162626|ref|ZP_14669381.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIHLM095]
gi|420167069|ref|ZP_14673730.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIHLM087]
gi|394235623|gb|EJD81173.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIHLM095]
gi|394238698|gb|EJD84155.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIHLM087]
Length = 302
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 37/186 (19%)
Query: 85 QQVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQ 144
+ +L+N + P+T+ +G TN AI L + P ++ I+ I +MGG+
Sbjct: 109 RNLLVN--TQEPLTLIAIGPLTNIAILLTSYPEVQPFIKEIVLMGGSTGR---------- 156
Query: 145 SEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVE 204
GN+ P AEFNI+ DP AA V + G+P+T+I LD + + +F +
Sbjct: 157 -------GNV-----TPLAEFNIYCDPEAAQIVFNYGLPLTMIGLDLAREALFTHHFVKD 204
Query: 205 FERRQNTYEAQY-CFQSLKMIRDTWSGSPPFHEAYCMWDSFMAGVALSIMLNSSSHNGEN 263
F+ T Y FQ K S F + ++D F + +L+ + N +
Sbjct: 205 FKDTNATSNMLYNLFQHYK--------SEDFDIGFKLYDVF----TILYLLDPEAFNVKE 252
Query: 264 ACSEME 269
A +++E
Sbjct: 253 AYTQIE 258
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 70/138 (50%), Gaps = 15/138 (10%)
Query: 535 QDNDDPELRQPLAVDVWKSI-VESIEPGSKITILTNGPLTNLAQII-GLQNSSSVIQDVY 592
Q N D +L AV+ +++ V + EP +T++ GPLTN+A ++ I+++
Sbjct: 93 QINQD-DLTSIHAVEAMRNLLVNTQEP---LTLIAIGPLTNIAILLTSYPEVQPFIKEIV 148
Query: 593 IVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFF 652
++GG+ G +GNV + AEFN++ DP AA+ VF L + +I L + R
Sbjct: 149 LMGGSTG----RGNV-----TPLAEFNIYCDPEAAQIVFNYGLPLTMIGLDLAREALFTH 199
Query: 653 KILHKLRDRKKTPESVFS 670
+ +D T +++
Sbjct: 200 HFVKDFKDTNATSNMLYN 217
>gi|372324261|ref|ZP_09518850.1| Inosine-uridine preferring nucleoside hydrolase [Oenococcus
kitaharae DSM 17330]
gi|366983069|gb|EHN58468.1| Inosine-uridine preferring nucleoside hydrolase [Oenococcus
kitaharae DSM 17330]
Length = 301
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 27/129 (20%)
Query: 77 APLRQPTAQ---QVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIR 133
+P++Q A+ VL+ S +T+ + GS+TNFA++ P I+ + MGG+I
Sbjct: 95 SPIKQTAAEAWHNVLVQ--SDEKVTLVLTGSYTNFALWFRQYPQDLAKIDRVLAMGGSI- 151
Query: 134 SDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
C + S+ AEFN+F+DP AA +L +G+P+T++ LD T
Sbjct: 152 --CGGNMTSA-------------------AEFNVFTDPDAAKILLSAGLPITMVGLDVTL 190
Query: 194 TIPVSENFF 202
V++++
Sbjct: 191 KAMVNQDWI 199
>gi|365838216|ref|ZP_09379567.1| cytidine/uridine-specific hydrolase [Hafnia alvei ATCC 51873]
gi|364560396|gb|EHM38336.1| cytidine/uridine-specific hydrolase [Hafnia alvei ATCC 51873]
Length = 316
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 50/118 (42%), Gaps = 22/118 (18%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
S P+TV G TN A+ L ++P L I I +MGGA +G
Sbjct: 115 SQQPVTVVATGPLTNIALLLTSHPELHAKISRIVIMGGAAM-----------------LG 157
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQN 210
N P AEFNI+ DP AA V SG+P+ + LD T + F + N
Sbjct: 158 NW-----TPAAEFNIYVDPEAAEIVFQSGLPIVMAGLDVTHRAQIMSEDIERFRQLGN 210
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 102/261 (39%), Gaps = 61/261 (23%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +ALI L P + LK + S+ T+ +L ++ R
Sbjct: 1 MSLPIILDCDPGHDDAIALILALASPE--LELKAVTTSAGNQTPDKTLRNALRILTLLQR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV A G V P L R+L
Sbjct: 59 SDIPV------AGGAVKP-----------------------------LMREL------II 77
Query: 525 AENSVRFGASQDNDDPELRQP----LAVDVWKSIVESIEPGSK-ITILTNGPLTNLAQII 579
A+N D PEL +P + + I +++ + +T++ GPLTN+A ++
Sbjct: 78 ADN---VHGESGLDGPELPEPSFAPQTCNAVELIAQTLRASQQPVTVVATGPLTNIALLL 134
Query: 580 GLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIK 638
+ I + I+GG N + AEFN+++DP AA+ VF+S L I
Sbjct: 135 TSHPELHAKISRIVIMGGAAMLGN---------WTPAAEFNIYVDPEAAEIVFQSGLPIV 185
Query: 639 LIPLHMQRRVASFFKILHKLR 659
+ L + R + + + R
Sbjct: 186 MAGLDVTHRAQIMSEDIERFR 206
>gi|78061238|ref|YP_371146.1| inosine/uridine-preferring nucleoside hydrolase [Burkholderia sp.
383]
gi|77969123|gb|ABB10502.1| Inosine/uridine-preferring nucleoside hydrolase [Burkholderia sp.
383]
Length = 357
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 58/133 (43%), Gaps = 24/133 (18%)
Query: 77 APLRQPTAQQVLINAISA---GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIR 133
APL A L++ +S G +T+ +G TN A L+ P ++ + I +MGGA
Sbjct: 142 APLAGGHAVSYLVDTLSRAAPGSVTLCALGPLTNIATALVEAPQIRGALREIVLMGGAF- 200
Query: 134 SDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
F N + P AEFNI+ DP AA V SG+P+ ++P D
Sbjct: 201 ---FERGNIT-----------------PAAEFNIYVDPQAAEVVFGSGVPIVVLPRDVAV 240
Query: 194 TIPVSENFFVEFE 206
P++ F
Sbjct: 241 KAPITPARVAPFR 253
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 14/106 (13%)
Query: 541 ELRQPLA----VDVWKSIVESIEPGSKITILTNGPLTNLAQ-IIGLQNSSSVIQDVYIVG 595
E R PLA V + PGS +T+ GPLTN+A ++ ++++ ++G
Sbjct: 139 EPRAPLAGGHAVSYLVDTLSRAAPGS-VTLCALGPLTNIATALVEAPQIRGALREIVLMG 197
Query: 596 GNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
G E+GN+ + AEFN+++DP AA+ VF S + I ++P
Sbjct: 198 G---AFFERGNI-----TPAAEFNIYVDPQAAEVVFGSGVPIVVLP 235
>gi|385678693|ref|ZP_10052621.1| Inosine-uridine nucleoside N-ribohydrolase [Amycolatopsis sp. ATCC
39116]
Length = 320
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 69/149 (46%), Gaps = 26/149 (17%)
Query: 57 YVNTNYGL--RKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMN 114
+V+ + GL R A LP+ R P + L+ A +A P+T+ +G TN A+ L
Sbjct: 81 HVHGSDGLSGRSAALPEPDRALEPGGAVSLLVSLLEA-AAEPVTIAPIGPLTNIALLLAA 139
Query: 115 NPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAA 174
+P +++ I I VMGG + N+T + AEFNI+SDP AA
Sbjct: 140 HPEVREKIGRIVVMGGGLAGG--NTTGA--------------------AEFNIWSDPEAA 177
Query: 175 YTVL-HSGIPVTIIPLDATKTIPVSENFF 202
VL +P ++P+D T V +
Sbjct: 178 RRVLVEETVPCVLVPMDLTYRCAVDSAWL 206
>gi|332685868|ref|YP_004455642.1| inosine-uridine preferring nucleoside hydrolase [Melissococcus
plutonius ATCC 35311]
gi|332369877|dbj|BAK20833.1| inosine-uridine preferring nucleoside hydrolase [Melissococcus
plutonius ATCC 35311]
Length = 313
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 58/195 (29%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQRLYVNT 60
++ R+DIP+ G + P++ + + TAG V+
Sbjct: 55 LLKREDIPIAGGNQ----------------TPLVKEELETAGN--------------VHG 84
Query: 61 NYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHL 118
G+ A LP + + + TA +++ + S +T+ V G TN A+FL P L
Sbjct: 85 KSGIDGAELP---KSHFEAQNMTAIELIAKVLHKSYEQVTLVVTGPMTNIALFLRIYPEL 141
Query: 119 -KKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTV 177
++ I+ I MGGAI +GN P EFNIF DP AA V
Sbjct: 142 AREKIDQIVFMGGAI-----------------GLGNW-----TPTVEFNIFVDPEAAKVV 179
Query: 178 LHSGIPVTIIPLDAT 192
L+ GIP+ + PL+ T
Sbjct: 180 LNFGIPLVMTPLNVT 194
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 101/249 (40%), Gaps = 59/249 (23%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M K ++ D D D LA+ L + I+L + S+ T+ ++L ++ R
Sbjct: 1 MRKRIILDCDPGHDDALAMS--LAIASSKIDLLAVTTSAGNQTPDKTLKNAMNILTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA----RDLPRSP 520
+DIP+ G+ PL + ++G + +LP+S
Sbjct: 59 EDIPIAGGN---------------------QTPLVKEELETAGNVHGKSGIDGAELPKS- 96
Query: 521 RRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIG 580
+ A+N EL + K + +S E ++T++ GP+TN+A +
Sbjct: 97 -HFEAQNMTAI---------EL-------IAKVLHKSYE---QVTLVVTGPMTNIALFLR 136
Query: 581 L--QNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIK 638
+ + + I + +GG G N V EFN+F+DP AAK V + +
Sbjct: 137 IYPELAREKIDQIVFMGGAIGLGNWTPTV---------EFNIFVDPEAAKVVLNFGIPLV 187
Query: 639 LIPLHMQRR 647
+ PL++ +
Sbjct: 188 MTPLNVTHK 196
>gi|385205602|ref|ZP_10032472.1| Inosine-uridine nucleoside N-ribohydrolase [Burkholderia sp. Ch1-1]
gi|385185493|gb|EIF34767.1| Inosine-uridine nucleoside N-ribohydrolase [Burkholderia sp. Ch1-1]
Length = 321
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 20/127 (15%)
Query: 84 AQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTN 141
A + +I+ + A P +T+ +G TN A+ L ++P + ++ + +MGGA +D
Sbjct: 106 AHRFIIDTVRAHPGEVTLLAVGPLTNLALALADDPQIAPLVKQVVIMGGAFGTDGV---- 161
Query: 142 SSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENF 201
+GN+ P AE NI DP AA V + PV I+ LD T+ +S ++
Sbjct: 162 ---------LGNV-----TPAAEANILGDPDAADIVFGAAWPVAIVGLDVTQRTIMSHDY 207
Query: 202 FVEFERR 208
R
Sbjct: 208 LASLRAR 214
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 9/113 (7%)
Query: 552 KSIVESIE--PGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEKGNVF 608
+ I++++ PG ++T+L GPLTNLA + + +++ V I+GG G D GNV
Sbjct: 108 RFIIDTVRAHPG-EVTLLAVGPLTNLALALADDPQIAPLVKQVVIMGGAFGTDGVLGNV- 165
Query: 609 TVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDR 661
+ AE N+ DP AA VF + + ++ L + +R L LR R
Sbjct: 166 ----TPAAEANILGDPDAADIVFGAAWPVAIVGLDVTQRTIMSHDYLASLRAR 214
>gi|302524908|ref|ZP_07277250.1| hypothetical protein SSMG_01290 [Streptomyces sp. AA4]
gi|302433803|gb|EFL05619.1| hypothetical protein SSMG_01290 [Streptomyces sp. AA4]
Length = 315
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 64/142 (45%), Gaps = 28/142 (19%)
Query: 67 AFLPQGGRKYAPLRQPTAQQVLINAISAG--PITVFVMGSHTNFAIFLMNNPHLKKNIEH 124
A LP R PL A ++++ + A P+T+ +G TN A L +P ++ I
Sbjct: 93 ASLPDATR---PLEDSDAVSLMVSLLEASDEPVTIAPIGPLTNIAALLAAHPGVRSKIAR 149
Query: 125 IYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVL-HSGIP 183
I +MGGAI ++GN S AEFNI++DP AA V+ +P
Sbjct: 150 IVLMGGAI-----------------NLGN-----STAVAEFNIWADPDAARRVIAEDDVP 187
Query: 184 VTIIPLDATKTIPVSENFFVEF 205
++PLD T V + +
Sbjct: 188 CVMVPLDLTHRCAVDSAWLAKL 209
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 61/126 (48%), Gaps = 19/126 (15%)
Query: 540 PELRQPL----AVDVWKSIVE-SIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYI 593
P+ +PL AV + S++E S EP +TI GPLTN+A ++ S I + +
Sbjct: 96 PDATRPLEDSDAVSLMVSLLEASDEP---VTIAPIGPLTNIAALLAAHPGVRSKIARIVL 152
Query: 594 VGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVF-ESKLEIKLIPLHMQRRVASFF 652
+GG N S+ AEFN++ DP AA+ V E + ++PL + R A
Sbjct: 153 MGGAINLGN---------STAVAEFNIWADPDAARRVIAEDDVPCVMVPLDLTHRCAVDS 203
Query: 653 KILHKL 658
L KL
Sbjct: 204 AWLAKL 209
>gi|295702705|ref|YP_003595780.1| inosine-uridine preferring nucleoside hydrolase [Bacillus
megaterium DSM 319]
gi|294800364|gb|ADF37430.1| putative inosine-uridine preferring nucleoside hydrolase [Bacillus
megaterium DSM 319]
Length = 314
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 101/252 (40%), Gaps = 35/252 (13%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMS---TAGECRYRQAIPVGQRLY 57
++ DD V + G I +G + P + Q IID+ S + R P +
Sbjct: 22 LLQMDD--VKITGVSVIPADGYLEPGISASQKIIDRFGSYDIEVAKSTSRGMNPFPKEWR 79
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
++T Y L + G + Q A LI + +AG T+ G T+ A L
Sbjct: 80 MHTFYVDALPILNEKGEVQTKISQLPAHDHLIETLQHTAGKTTLLFTGPLTDLARALEKA 139
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P +++ I+ + MGG + +GN+ + + AE+N F DP A
Sbjct: 140 PEIEEKIDKLVWMGGTFQE----------------VGNVQEPEHDGTAEWNAFWDPEAVA 183
Query: 176 TVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPF- 234
V S I + ++ L++T +P++ + + + ++ + + ++ PP
Sbjct: 184 KVWESSIKIEMVALESTNQVPLTPAI-------RQMWASLRRYEGVDFVGQCYAACPPLV 236
Query: 235 ----HEAYCMWD 242
+ Y +WD
Sbjct: 237 HVETNSTYYLWD 248
Score = 45.8 bits (107), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 554 IVESIE-PGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPS 612
++E+++ K T+L GPLT+LA+ L+ + + + + + G E GNV
Sbjct: 110 LIETLQHTAGKTTLLFTGPLTDLAR--ALEKAPEIEEKIDKLVWMGGTFQEVGNVQEPEH 167
Query: 613 SKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
AE+N F DP A V+ES ++I+++ L +V
Sbjct: 168 DGTAEWNAFWDPEAVAKVWESSIKIEMVALESTNQV 203
>gi|440680813|ref|YP_007155608.1| Inosine/uridine-preferring nucleoside hydrolase [Anabaena
cylindrica PCC 7122]
gi|428677932|gb|AFZ56698.1| Inosine/uridine-preferring nucleoside hydrolase [Anabaena
cylindrica PCC 7122]
Length = 307
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 98/243 (40%), Gaps = 40/243 (16%)
Query: 55 RLYVNTNYGL-RKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIF 111
RLY ++ + R L Q PL T Q ++ + ++ P+T+ V G T A+
Sbjct: 77 RLYRRDSFIIDRLPILNQEETINTPLVAQTGQDFMVQVLREASEPVTLMVTGPLTTVAVA 136
Query: 112 LMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDP 171
L P +++ I I MGGA+ N +S + G+ AE+N++ D
Sbjct: 137 LDQAPEIEEKIAKIVWMGGALNV----PGNVEKSLEAGQDGS---------AEWNVYWDA 183
Query: 172 FAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGS 231
+A V + I V + PLD T +P++ + R++ + Q ++
Sbjct: 184 VSAARVWETQIEVIMCPLDLTNNVPMALELLKKITRQRQYPISDLAGQCYALVA------ 237
Query: 232 PPFHEAYCMWDSFMAGVALSIMLNSSSHNGENACSEMEYMNLTVVTSNEPYGISDGSNPL 291
H+ Y WD A ++ G+ E+ ++T+ G+S G +
Sbjct: 238 ---HQDYYFWDVLAA-----------AYLGKPEFYELREWETEIITT----GVSQGRTKV 279
Query: 292 IDG 294
+ G
Sbjct: 280 VSG 282
>gi|330992482|ref|ZP_08316430.1| hypothetical protein SXCC_02389 [Gluconacetobacter sp. SXCC-1]
gi|329760681|gb|EGG77177.1| hypothetical protein SXCC_02389 [Gluconacetobacter sp. SXCC-1]
Length = 309
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 49/116 (42%), Gaps = 21/116 (18%)
Query: 95 GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNL 154
G IT+ +G TN A+ L P L+ I I +MG A +GN+
Sbjct: 116 GAITLCTIGPLTNIALALAREPALRTRIGQIVMMGCAF----------------SEVGNI 159
Query: 155 YPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQN 210
P EFNI+ DP AA V SGI + + PLD T + S ER N
Sbjct: 160 -----TPTGEFNIYVDPHAAEMVFRSGIKLVVFPLDVTHQLHTSAARLARIERIPN 210
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 100/237 (42%), Gaps = 47/237 (19%)
Query: 413 IDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIPVGLG 472
ID G AL LL L I L G+ + + T + L ++GR DIPV
Sbjct: 5 IDTDPGQDDALTILLALASPEIELLGVTTVAGNVSVEQTTENALKTLDLVGRADIPV--- 61
Query: 473 DVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENSVRFG 532
G P P + G GF G+ DLP R T ++V F
Sbjct: 62 ---HAGADRPLLRPGVNATHVH----GRTGF------EGV--DLPPPSRAATPGHAVDF- 105
Query: 533 ASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS-SSVIQDV 591
+ ++++E+ P IT+ T GPLTN+A + + + + I +
Sbjct: 106 -----------------IIRTVMEN--PPGAITLCTIGPLTNIALALAREPALRTRIGQI 146
Query: 592 YIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
++G +E GN+ + EFN+++DP AA+ VF S +++ + PL + ++
Sbjct: 147 VMMGC---AFSEVGNI-----TPTGEFNIYVDPHAAEMVFRSGIKLVVFPLDVTHQL 195
>gi|379728053|ref|YP_005320238.1| inosine-uridine preferring nucleoside hydrolase [Melissococcus
plutonius DAT561]
gi|376318956|dbj|BAL62743.1| inosine-uridine preferring nucleoside hydrolase [Melissococcus
plutonius DAT561]
Length = 313
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 58/195 (29%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQRLYVNT 60
++ R+DIP+ G + P++ + + TAG V+
Sbjct: 55 LLKREDIPIAGGNQ----------------TPLVKEELETAGN--------------VHG 84
Query: 61 NYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHL 118
G+ A LP + + + TA +++ + S +T+ V G TN A+FL P L
Sbjct: 85 KSGIDGAELP---KSHFEAQNMTAIELIAKVLHKSYEQVTLVVTGPMTNIALFLRIYPEL 141
Query: 119 -KKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTV 177
++ I+ I MGGAI +GN P EFNIF DP AA V
Sbjct: 142 AREKIDQIVFMGGAI-----------------GLGNW-----TPTVEFNIFVDPEAAKVV 179
Query: 178 LHSGIPVTIIPLDAT 192
L+ GIP+ + PL+ T
Sbjct: 180 LNFGIPLVMTPLNVT 194
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 101/249 (40%), Gaps = 59/249 (23%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M K ++ D D D LA+ L + I+L + S+ T+ ++L ++ R
Sbjct: 1 MRKRIILDCDPGHDDALAMS--LAIASSKIDLLAVTTSAGNQTPDKTLKNAMNILTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA----RDLPRSP 520
+DIP+ G+ PL + ++G + +LP+S
Sbjct: 59 EDIPIAGGN---------------------QTPLVKEELETAGNVHGKSGIDGAELPKS- 96
Query: 521 RRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIG 580
+ A+N EL + K + +S E ++T++ GP+TN+A +
Sbjct: 97 -HFEAQNMTAI---------EL-------IAKVLHKSYE---QVTLVVTGPMTNIALFLR 136
Query: 581 L--QNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIK 638
+ + + I + +GG G N V EFN+F+DP AAK V + +
Sbjct: 137 IYPELAREKIDQIVFMGGAIGLGNWTPTV---------EFNIFVDPEAAKVVLNFGIPLV 187
Query: 639 LIPLHMQRR 647
+ PL++ +
Sbjct: 188 MTPLNVTHK 196
>gi|225022861|ref|ZP_03712053.1| hypothetical protein CORMATOL_02907 [Corynebacterium matruchotii
ATCC 33806]
gi|224944385|gb|EEG25594.1| hypothetical protein CORMATOL_02907 [Corynebacterium matruchotii
ATCC 33806]
Length = 359
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 26/107 (24%)
Query: 98 TVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPD 157
T+ + G TN A +L ++P ++ IY+MGGA LYP
Sbjct: 149 TLIITGPATNLATYLRDHPAHQR----IYLMGGAY---------------------LYPG 183
Query: 158 DSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVE 204
++ P AE+N + DP AA V H+ IP+T+ PL ++ PV+E+ +
Sbjct: 184 NTTPTAEWNTWVDPHAAAEVFHATIPITVCPL-GVRSQPVTESMLLS 229
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 97/241 (40%), Gaps = 38/241 (15%)
Query: 408 PVVFDIDMSAGDFLALIYLLKLPVE-LINLKGILVSSTGWATSATVDVVYDLLHMMGRDD 466
PV+ D D D LAL+YL L + L+ + ++ + T +L + G +
Sbjct: 17 PVLIDCDTGIDDALALVYLAGLAAAGEVQLRAVTTTAGNVDVTQTALNSTHILRLCGLPN 76
Query: 467 IPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAE 526
+PV + G A+PL + ++ +GL +P T+
Sbjct: 77 VPV-----------------VAGVPTPLAVPLVTTP--ETHGPHGLGYVIPPE----TST 113
Query: 527 NSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSS 586
+++ + D + P W + + T++ GP TNLA +
Sbjct: 114 DTIAVTPGEPPDTVPVSVPAVATGWADLWRA---NRDATLIITGPATNLATYL---RDHP 167
Query: 587 VIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQR 646
Q +Y++GG GN ++ AE+N ++DP AA VF + + I + PL ++
Sbjct: 168 AHQRIYLMGGAYLY---PGN-----TTPTAEWNTWVDPHAAAEVFHATIPITVCPLGVRS 219
Query: 647 R 647
+
Sbjct: 220 Q 220
>gi|404417592|ref|ZP_10999382.1| ribonucleoside hydrolase RihC [Staphylococcus arlettae CVD059]
gi|403489977|gb|EJY95532.1| ribonucleoside hydrolase RihC [Staphylococcus arlettae CVD059]
Length = 302
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 56/109 (51%), Gaps = 24/109 (22%)
Query: 86 QVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQS 145
+LIN S PIT+ +G TN A+ L P +K I+ I +MGG+
Sbjct: 110 DLLIN--SKEPITLIPIGPLTNIALLLTTYPEVKTQIKEIILMGGSAGR----------- 156
Query: 146 EQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKT 194
GN+ P AEFNI+ DP AA+ V +SG+P+T++ LD ++
Sbjct: 157 ------GNV-----TPLAEFNIYCDPEAAHIVFNSGLPLTMVGLDVARS 194
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 61/116 (52%), Gaps = 13/116 (11%)
Query: 550 VWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEKGNVF 608
++ ++ S EP IT++ GPLTN+A ++ + I+++ ++GG+ G +GNV
Sbjct: 108 MYDLLINSKEP---ITLIPIGPLTNIALLLTTYPEVKTQIKEIILMGGSAG----RGNV- 159
Query: 609 TVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKT 664
+ AEFN++ DP AA VF S L + ++ L + R L KL+ T
Sbjct: 160 ----TPLAEFNIYCDPEAAHIVFNSGLPLTMVGLDVARSSTLIHAKLEKLKSLNDT 211
>gi|422782562|ref|ZP_16835347.1| inosine-uridine nucleoside hydrolase [Escherichia coli TW10509]
gi|323976366|gb|EGB71456.1| inosine-uridine nucleoside hydrolase [Escherichia coli TW10509]
Length = 311
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 64/137 (46%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + S P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPE--PTFAP-QNCTAVELMAKTLRESNEPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGG++ +GN P AEFNI+ DP AA
Sbjct: 138 PELHSEIARIVIMGGSM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 IVFQSGIPVVMAGLDVT 192
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 109/264 (41%), Gaps = 67/264 (25%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV A G V P L RDL
Sbjct: 59 TDIPV------AGGAVKP-----------------------------LMRDL------II 77
Query: 525 AENSVRFGASQDNDDPELRQPL-------AVDVW-KSIVESIEPGSKITILTNGPLTNLA 576
A+N D P L +P AV++ K++ ES EP +TI++ GP TN+A
Sbjct: 78 ADN---VHGESGLDGPALPEPTFAPQNCTAVELMAKTLRESNEP---VTIVSTGPQTNVA 131
Query: 577 QIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ S I + I+GG+ G N + AEFN+++DP AA+ VF+S +
Sbjct: 132 LLLNSHPELHSEIARIVIMGGSMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGI 182
Query: 636 EIKLIPLHMQRRVASFFKILHKLR 659
+ + L + + + + + R
Sbjct: 183 PVVMAGLDVTHKAQIYVEDTERFR 206
>gi|23466314|ref|NP_696917.1| ribonucleoside hydrolase RihC [Bifidobacterium longum NCC2705]
gi|239621703|ref|ZP_04664734.1| inosine/uridine-preferring nucleoside hydrolase [Bifidobacterium
longum subsp. infantis CCUG 52486]
gi|317481764|ref|ZP_07940793.1| inosine-uridine preferring nucleoside hydrolase [Bifidobacterium
sp. 12_1_47BFAA]
gi|419856202|ref|ZP_14378936.1| putative non-specific ribonucleoside hydrolase RihC
[Bifidobacterium longum subsp. longum 44B]
gi|23327068|gb|AAN25553.1| widely conserved hypothetical protein in the inosine-uridine
preferring nucleoside hydrolase family [Bifidobacterium
longum NCC2705]
gi|239515578|gb|EEQ55445.1| inosine/uridine-preferring nucleoside hydrolase [Bifidobacterium
longum subsp. infantis CCUG 52486]
gi|316916786|gb|EFV38179.1| inosine-uridine preferring nucleoside hydrolase [Bifidobacterium
sp. 12_1_47BFAA]
gi|386413780|gb|EIJ28360.1| putative non-specific ribonucleoside hydrolase RihC
[Bifidobacterium longum subsp. longum 44B]
Length = 306
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 48/99 (48%), Gaps = 22/99 (22%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
SA P+TV +G TN A+ L P +K IE I +MGG++ G
Sbjct: 116 SAEPVTVMPIGPLTNIALLLKTFPEVKSRIERIVLMGGSVTR-----------------G 158
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDA 191
N AEFNIF DP AA VL SG+ +T+ LDA
Sbjct: 159 N-----KGVMAEFNIFVDPEAAKIVLTSGLDITMATLDA 192
Score = 46.6 bits (109), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 19/112 (16%)
Query: 538 DDPELRQPLAVD------VWKSIVESIEPGSKITILTNGPLTNLAQII-GLQNSSSVIQD 590
D PE + L +D + I+ S EP +T++ GPLTN+A ++ S I+
Sbjct: 91 DFPEPKTELLLDKHAVEAMHDEIMASAEP---VTVMPIGPLTNIALLLKTFPEVKSRIER 147
Query: 591 VYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+ ++GG+ + N+ AEFN+F+DP AAK V S L+I + L
Sbjct: 148 IVLMGGSVTRGNK---------GVMAEFNIFVDPEAAKIVLTSGLDITMATL 190
>gi|337266327|ref|YP_004610382.1| ribosylpyrimidine nucleosidase [Mesorhizobium opportunistum
WSM2075]
gi|336026637|gb|AEH86288.1| Ribosylpyrimidine nucleosidase [Mesorhizobium opportunistum
WSM2075]
Length = 313
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 21/99 (21%)
Query: 94 AGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGN 153
+G IT+ +G TN A+ L+ P + I+ I +MGG F N +
Sbjct: 119 SGTITLCPLGPLTNIALALIREPRIAPRIKEIVLMGGGF----FEGGNVT---------- 164
Query: 154 LYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
P AEFNI+ DP AA V SGIP+ ++PLD T
Sbjct: 165 -------PTAEFNIYVDPQAADLVFKSGIPIVMMPLDVT 196
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 14/122 (11%)
Query: 541 ELRQPLAVDVWKSIVESI--EPGSKITILTNGPLTNLA-QIIGLQNSSSVIQDVYIVGGN 597
+L++ AVD IVE++ E IT+ GPLTN+A +I + I+++ ++GG
Sbjct: 100 KLQEQYAVDF---IVETLMKEDSGTITLCPLGPLTNIALALIREPRIAPRIKEIVLMGGG 156
Query: 598 KGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHK 657
E GNV + AEFN+++DP AA VF+S + I ++PL + + + K
Sbjct: 157 F---FEGGNV-----TPTAEFNIYVDPQAADLVFKSGIPIVMMPLDVTHKALTTAKRTQA 208
Query: 658 LR 659
R
Sbjct: 209 FR 210
>gi|373462899|ref|ZP_09554562.1| putative cytidine/uridine-specific hydrolase [Lactobacillus
kisonensis F0435]
gi|371765788|gb|EHO54087.1| putative cytidine/uridine-specific hydrolase [Lactobacillus
kisonensis F0435]
Length = 304
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 24/131 (18%)
Query: 83 TAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNST 140
+A + L +AI S IT+ GS+TN A+ P +K +IE I MGG++
Sbjct: 102 SAVEALHDAIMSSDEKITLVPTGSYTNIALLFSEYPEVKDHIERIVAMGGSLGK------ 155
Query: 141 NSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSEN 200
GN+ AEFN+F+DP AA + +SGIP+T++ LD T ++ +
Sbjct: 156 -----------GNM-----TSAAEFNVFTDPDAARIMYNSGIPITMVGLDITMKALLTPD 199
Query: 201 FFVEFERRQNT 211
+ E T
Sbjct: 200 SLSKLEHMNET 210
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 11/126 (8%)
Query: 541 ELRQPLAVDVWKSIVESI-EPGSKITILTNGPLTNLAQIIG-LQNSSSVIQDVYIVGGNK 598
+L +PL V +++ ++I KIT++ G TN+A + I+ + +GG+
Sbjct: 94 DLPKPLDVSAVEALHDAIMSSDEKITLVPTGSYTNIALLFSEYPEVKDHIERIVAMGGSL 153
Query: 599 GQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKL 658
G KGN+ + AEFN+F DP AA+ ++ S + I ++ L + + L KL
Sbjct: 154 G----KGNM-----TSAAEFNVFTDPDAARIMYNSGIPITMVGLDITMKALLTPDSLSKL 204
Query: 659 RDRKKT 664
+T
Sbjct: 205 EHMNET 210
>gi|427734989|ref|YP_007054533.1| inosine-uridine nucleoside N-ribohydrolase [Rivularia sp. PCC 7116]
gi|427370030|gb|AFY53986.1| Inosine-uridine nucleoside N-ribohydrolase [Rivularia sp. PCC 7116]
Length = 307
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 145/356 (40%), Gaps = 63/356 (17%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
V+ D D D+LA + L+ + + + G++V++ V+ +L +MG DIP
Sbjct: 6 VLMDHDGGVDDYLATMLLMTM--DNVQPLGVVVTAADCYAQPAVNATRKILDLMGFSDIP 63
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V V V NP P Y ++
Sbjct: 64 VAESKVRGV---NP------------------------------------FPNLYRRDSF 84
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSI-VESIEPGSK-ITILTNGPLTNLAQIIGLQNSSS 586
V N + PL + + V+ +E S+ +TI+ GPL+N+A LQ +
Sbjct: 85 VVDHFPILNQQETITTPLVTEAGEYFTVKVLESASEPVTIMATGPLSNIAT--ALQKAPH 142
Query: 587 VIQDVYIVGGNKGQDNEKGNV---FTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLH 643
+ +++ + G N GNV + AE+N + DP++ +++S++EI + PL
Sbjct: 143 IEKNIKRIVWMGGALNVPGNVEKNWEPGQDGSAEWNAYWDPISVARIWDSQIEIIMCPLD 202
Query: 644 MQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVIL 703
+ V +I+ K+ ++ P S + Q + D + +VL L
Sbjct: 203 ITNNVPVTSEIVQKMGKQRNYPVSDLA----------GQCYALVIPQDYYFWDVLATAYL 252
Query: 704 GGNPHLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAE 759
P + +I++ EII+DG +I+ G+ V V++ ++ +Y++ +
Sbjct: 253 -AKPEFFELKQIET-EIITDGKSQGRTKIV---SGGRKVSVMDKVDKEAFYNYILQ 303
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 13/118 (11%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
++ P+T+ G +N A L PH++KNI+ I MGGA+ N ++ + G
Sbjct: 118 ASEPVTIMATGPLSNIATALQKAPHIEKNIKRIVWMGGALNV----PGNVEKNWEPGQDG 173
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQN 210
+ AE+N + DP + + S I + + PLD T +PV+ + +++N
Sbjct: 174 S---------AEWNAYWDPISVARIWDSQIEIIMCPLDITNNVPVTSEIVQKMGKQRN 222
>gi|306812924|ref|ZP_07447117.1| ribonucleoside hydrolase 1 [Escherichia coli NC101]
gi|432380295|ref|ZP_19623253.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE15]
gi|432386066|ref|ZP_19628964.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE16]
gi|432512867|ref|ZP_19750103.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE224]
gi|432610343|ref|ZP_19846515.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE72]
gi|432645101|ref|ZP_19880901.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE86]
gi|432654899|ref|ZP_19890612.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE93]
gi|432697978|ref|ZP_19933146.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE169]
gi|432744598|ref|ZP_19979299.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE43]
gi|432903004|ref|ZP_20112621.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE194]
gi|432942619|ref|ZP_20139878.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE183]
gi|432970785|ref|ZP_20159663.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE207]
gi|432984301|ref|ZP_20173039.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE215]
gi|433037604|ref|ZP_20225221.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE113]
gi|433081555|ref|ZP_20268029.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE133]
gi|433100181|ref|ZP_20286291.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE145]
gi|433143248|ref|ZP_20328416.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE168]
gi|433187456|ref|ZP_20371576.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE88]
gi|305853687|gb|EFM54126.1| ribonucleoside hydrolase 1 [Escherichia coli NC101]
gi|430909572|gb|ELC30938.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE16]
gi|430911555|gb|ELC32838.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE15]
gi|431044425|gb|ELD54698.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE224]
gi|431151161|gb|ELE52196.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE72]
gi|431183879|gb|ELE83652.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE86]
gi|431194293|gb|ELE93558.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE93]
gi|431246688|gb|ELF40946.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE169]
gi|431295071|gb|ELF85242.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE43]
gi|431436534|gb|ELH18049.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE194]
gi|431453671|gb|ELH34055.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE183]
gi|431485922|gb|ELH65579.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE207]
gi|431506044|gb|ELH84648.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE215]
gi|431555139|gb|ELI28997.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE113]
gi|431605390|gb|ELI74779.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE133]
gi|431622304|gb|ELI91085.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE145]
gi|431665819|gb|ELJ32529.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE168]
gi|431709091|gb|ELJ73588.1| pyrimidine-specific ribonucleoside hydrolase rihA [Escherichia coli
KTE88]
Length = 311
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 77/194 (39%), Gaps = 58/194 (29%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQRLYVNT 60
++NR DIPV G ++ N I +V G
Sbjct: 55 LLNRTDIPVASGAVKPLMRNLIIADNVHG------------------------------- 83
Query: 61 NYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHL 118
GL LP+ +AP + TA +++ + S +T+ G TN A+ L ++P L
Sbjct: 84 ESGLDGPALPEPA--FAP-QNCTAVELMAKTLRESEESVTIVSTGPQTNVALLLNSHPEL 140
Query: 119 KKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVL 178
I I +MGGA+ +GN P AEFNI+ DP AA V
Sbjct: 141 HSKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAEIVF 178
Query: 179 HSGIPVTIIPLDAT 192
SGIPV + LD T
Sbjct: 179 QSGIPVVMAGLDVT 192
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 105/257 (40%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILLDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 TDIPV------ASGAVKPLM----------------RNLIIADNVHGESGLDGPALPEPA 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q+ EL K++ ES E +TI++ GP TN+A ++
Sbjct: 97 FA--------PQNCTAVELMA-------KTLRESEE---SVTIVSTGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
S I + I+GG G N + AEFN+++DP AA+ VF+S + + + L
Sbjct: 139 ELHSKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + + R
Sbjct: 190 DVTHKAQIHVEDTERFR 206
>gi|167624344|ref|YP_001674638.1| ribonucleoside hydrolase 1 [Shewanella halifaxensis HAW-EB4]
gi|167354366|gb|ABZ76979.1| Inosine/uridine-preferring nucleoside hydrolase [Shewanella
halifaxensis HAW-EB4]
Length = 322
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 66/148 (44%), Gaps = 31/148 (20%)
Query: 51 PVGQRLYVNTNY----GLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGS 104
P+ + L + N GL LP +APL +A +++ + S +T+ G
Sbjct: 81 PLARELIIADNVHGESGLDGPKLPDPA--FAPLTI-SAIELMAQKVRESDEAVTLVPSGP 137
Query: 105 HTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAE 164
TN A+FL P L IE I +MGGA + GN P AE
Sbjct: 138 LTNIALFLATYPELHSKIERIVLMGGAAEA-----------------GNW-----TPAAE 175
Query: 165 FNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
FNIF DP AA V SGIP+T+ LD T
Sbjct: 176 FNIFVDPEAADMVFKSGIPITMCGLDIT 203
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 55/255 (21%)
Query: 408 PVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDI 467
P++ D D D ++LI L + + + S+ T++ +L ++ R DI
Sbjct: 15 PIILDCDPGHDDAISLI--LAMSSSALKPLAVTTSAGNQTPDKTLNNALRILTLLERHDI 72
Query: 468 PVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRYTAE 526
PV G PK PL + +D ++G + D P+ P
Sbjct: 73 PVAAG--------APK-------------PLARE-LIIADNVHGESGLDGPKLP------ 104
Query: 527 NSVRFGASQDNDDPELRQPLAVDVWKSIVESI-EPGSKITILTNGPLTNLAQIIGLQNS- 584
DP PL + + + + + E +T++ +GPLTN+A +
Sbjct: 105 ------------DPAF-APLTISAIELMAQKVRESDEAVTLVPSGPLTNIALFLATYPEL 151
Query: 585 SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHM 644
S I+ + ++GG E GN + AEFN+F+DP AA VF+S + I + L +
Sbjct: 152 HSKIERIVLMGGAA----EAGN-----WTPAAEFNIFVDPEAADMVFKSGIPITMCGLDI 202
Query: 645 QRRVASFFKILHKLR 659
+ + + ++R
Sbjct: 203 THQAQIMDEDIERIR 217
>gi|21222190|ref|NP_627969.1| nucleoside hydrolase [Streptomyces coelicolor A3(2)]
gi|289770615|ref|ZP_06529993.1| nucleoside hydrolase [Streptomyces lividans TK24]
gi|10432483|emb|CAC10317.1| putative nucleoside hydrolase [Streptomyces coelicolor A3(2)]
gi|289700814|gb|EFD68243.1| nucleoside hydrolase [Streptomyces lividans TK24]
Length = 326
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 56/119 (47%), Gaps = 27/119 (22%)
Query: 77 APLRQPT---AQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGA 131
AP R P A +L I A P +T+ TN A+ L +P + NIE I MGGA
Sbjct: 102 APTRAPADVDAVTLLRREILASPRPVTLIPTAPLTNIALLLRTHPEVTGNIERIVFMGGA 161
Query: 132 IRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLD 190
+ + GN + P AEFN++ DP AA +L +G+P+T+ LD
Sbjct: 162 V-----------------ATGN-----ATPVAEFNVWHDPEAAAILLTAGVPITMYGLD 198
>gi|373948177|ref|ZP_09608138.1| Ribosylpyrimidine nucleosidase [Shewanella baltica OS183]
gi|373884777|gb|EHQ13669.1| Ribosylpyrimidine nucleosidase [Shewanella baltica OS183]
Length = 318
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 69/148 (46%), Gaps = 31/148 (20%)
Query: 51 PVGQRLYVNTNY----GLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGS 104
P+ ++L + N GL LP+ ++P + TA +++ I S P+T+ G
Sbjct: 70 PLTRQLIIADNVHGETGLDGPALPE--PSFSP-QAITAVELMAQQIRQSTQPVTLVPTGP 126
Query: 105 HTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAE 164
TN A+ L ++ L IE I +MGGA +GN P AE
Sbjct: 127 LTNIALLLASHSELHPKIERIVLMGGAA-----------------GVGNW-----TPAAE 164
Query: 165 FNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
FNIF DP AA V SGIP+T+ LD T
Sbjct: 165 FNIFVDPEAADIVFKSGIPITMCGLDVT 192
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 105/258 (40%), Gaps = 55/258 (21%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M + ++ D D D +ALI L P +L+ L + S+ T++ +L ++ R
Sbjct: 1 MTRHIILDCDPGHDDAIALILALAHP-DLVPL-AVTTSAGNQTPDKTLNNALRILTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDT-LYGLARDLPR-SPRR 522
DIPV GG L + +T L G A P SP+
Sbjct: 59 GDIPVA-----------------GGATKPLTRQLIIADNVHGETGLDGPALPEPSFSPQA 101
Query: 523 YTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ 582
TA V A Q I +S +P +T++ GPLTN+A ++
Sbjct: 102 ITA---VELMAQQ------------------IRQSTQP---VTLVPTGPLTNIALLLASH 137
Query: 583 NS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
+ I+ + ++GG G N + AEFN+F+DP AA VF+S + I +
Sbjct: 138 SELHPKIERIVLMGGAAGVGN---------WTPAAEFNIFVDPEAADIVFKSGIPITMCG 188
Query: 642 LHMQRRVASFFKILHKLR 659
L + + + + ++R
Sbjct: 189 LDVTHQAQIMDEDIERIR 206
>gi|413921791|gb|AFW61723.1| hypothetical protein ZEAMMB73_926916 [Zea mays]
Length = 296
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 75/181 (41%), Gaps = 27/181 (14%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISA--GPITVFVMGSHTNFAIFLMN 114
+V+ + G+ FLP K + +A ++N +S G ++V +G TN A+ +
Sbjct: 89 FVHGSDGIGNLFLPAPSAKKV---EESAADFMVNKVSEFPGEVSVLALGPLTNVALAIKR 145
Query: 115 NPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAA 174
+P + I V+GGA + NP AE NI DP AA
Sbjct: 146 DPSFASKVNKIVVLGGAF---------------------FVAGNVNPAAEANILGDPEAA 184
Query: 175 YTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPF 234
V SG V ++ ++ T + +++ +E R A + ++ K RD S F
Sbjct: 185 DIVFTSGADVIVVGINITTQVCLTDEGLLEL-RNSKGKHAPFLSETCKFYRDWHVKSDGF 243
Query: 235 H 235
H
Sbjct: 244 H 244
>gi|420240440|ref|ZP_14744665.1| Inosine-uridine nucleoside N-ribohydrolase [Rhizobium sp. CF080]
gi|398076282|gb|EJL67350.1| Inosine-uridine nucleoside N-ribohydrolase [Rhizobium sp. CF080]
Length = 324
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 27/152 (17%)
Query: 44 CRYRQAIPVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAIS---AGPITVF 100
C P+ +V+ GL A LP+ PL++ +I ++ AG +TV
Sbjct: 67 CSQPMTGPLVTAEHVHGATGLDGADLPE---PTMPLQEQHGVDFIIETLTSEPAGTVTVC 123
Query: 101 VMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSN 160
+G T+ L P + I+ I +MGG + F N +
Sbjct: 124 TLGPLTDLGKALTRVPEIAGRIKKIVLMGGGL----FEGGNIT----------------- 162
Query: 161 PYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
P AEFNI+ DP AA V SG+P+ ++PLD T
Sbjct: 163 PAAEFNIYVDPQAAAVVFGSGVPIVMMPLDVT 194
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 69/137 (50%), Gaps = 25/137 (18%)
Query: 538 DDPELRQPL----AVDVWKSIVESI--EPGSKITILTNGPLTNLAQIIG-LQNSSSVIQD 590
D PE PL VD I+E++ EP +T+ T GPLT+L + + + + I+
Sbjct: 91 DLPEPTMPLQEQHGVDF---IIETLTSEPAGTVTVCTLGPLTDLGKALTRVPEIAGRIKK 147
Query: 591 VYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHM------ 644
+ ++GG E GN+ + AEFN+++DP AA VF S + I ++PL +
Sbjct: 148 IVLMGGGL---FEGGNI-----TPAAEFNIYVDPQAAAVVFGSGVPIVMMPLDVTHKTLT 199
Query: 645 -QRRVASFFKILHKLRD 660
+ RVA+ I L D
Sbjct: 200 TRARVAAVQAIGTPLSD 216
>gi|456388968|gb|EMF54408.1| ybeK protein [Streptomyces bottropensis ATCC 25435]
Length = 329
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 46/98 (46%), Gaps = 21/98 (21%)
Query: 95 GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNL 154
G +TV G TN A+ L+ +P + MGGA +
Sbjct: 121 GELTVCATGPLTNIAVALLEDPRFAHRVARFVFMGGAAQ--------------------- 159
Query: 155 YPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
P + P AEFNI++DP AA VL SGIP T++ LDA+
Sbjct: 160 VPGNITPVAEFNIWADPDAAEIVLSSGIPFTMVDLDAS 197
>gi|385675075|ref|ZP_10049003.1| pyrimidine-specific ribonucleoside hydrolase RihA
(Cytidine/uridine-specific hydrolase) [Amycolatopsis sp.
ATCC 39116]
Length = 321
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 34/172 (19%)
Query: 80 RQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCF 137
R +A + L++ + + P+T+ +G +N A L +P ++ ++ I +MGGA
Sbjct: 105 RDESAVEFLLHTLRDATEPVTLVPVGPLSNIATVLAADPGVRDAVDEIVIMGGA------ 158
Query: 138 NSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIP-VTIIPLDATKTIP 196
+ GN+ P AEFNI++DP AA VL +G P +T++PLDAT
Sbjct: 159 -----------HAYGNV-----TPSAEFNIWADPEAAAMVLSAGFPRLTLVPLDATHQAL 202
Query: 197 VSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSG--------SPPFHEAYCM 240
V+ + +T + + D +S S P H+A C+
Sbjct: 203 VTRADCAKLA-GLDTAAGRAAADLITRRIDAYSAGRGVNAPDSAPVHDAVCV 253
Score = 46.2 bits (108), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 100/241 (41%), Gaps = 49/241 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M + V+ D+D D +A I L L +L +L + + SAT +L +GR
Sbjct: 1 MTRKVILDVDTGTDDAVA-IMLAALHPDL-DLAAVTTVNGNVPLSATTGNTLRVLDAIGR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDT-LYGLARDLPRSPRRY 523
DIPV G + FP G + + DSD ++G A LP
Sbjct: 59 PDIPVHPGLAHPIARRG--FP--GQTHFER----------DSDRDMHGSALPLPAPVTAA 104
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ- 582
E++V F + ++ ++ EP +T++ GPL+N+A ++
Sbjct: 105 RDESAVEF------------------LLHTLRDATEP---VTLVPVGPLSNIATVLAADP 143
Query: 583 NSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL-EIKLIP 641
+ ++ I+GG GNV + AEFN++ DP AA V + + L+P
Sbjct: 144 GVRDAVDEIVIMGGAHAY----GNV-----TPSAEFNIWADPEAAAMVLSAGFPRLTLVP 194
Query: 642 L 642
L
Sbjct: 195 L 195
>gi|117921913|ref|YP_871105.1| ribonucleoside hydrolase 1 [Shewanella sp. ANA-3]
gi|166226417|sp|A0L0Y0.1|RIHA_SHESA RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|117614245|gb|ABK49699.1| Inosine/uridine-preferring nucleoside hydrolase [Shewanella sp.
ANA-3]
Length = 318
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 66/155 (42%), Gaps = 45/155 (29%)
Query: 51 PVGQRLYVNTNY----GLRKAFLPQGGRKYAPLRQPTAQQVLINAI---------SAGPI 97
P+ + L + N GL LP AP QP A +NA+ S P+
Sbjct: 70 PLSRELMIADNVHGETGLDGPALP------APSFQPQA----VNAVELMAEKIRQSDKPV 119
Query: 98 TVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPD 157
T+ G TN A+ L ++ L IE I +MGGA +GN
Sbjct: 120 TLVPTGPLTNIALLLASHAELHAKIERIVLMGGAA-----------------GVGNW--- 159
Query: 158 DSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
P AEFNIF DP AA V SGIP+T+ LD T
Sbjct: 160 --TPAAEFNIFVDPEAADIVFKSGIPITMCGLDVT 192
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 107/258 (41%), Gaps = 55/258 (21%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M +P++ D D D +ALI L P EL L + S+ T++ +L ++ R
Sbjct: 1 MSRPIILDCDPGHDDAIALILALAHP-ELTPL-AVTTSAGNQTPDKTLNNALRILTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYG-LARDLPRSPRRY 523
DIPV A G V P S + +D ++G D P P
Sbjct: 59 SDIPV------AGGAVKPL----------------SRELMIADNVHGETGLDGPALPA-- 94
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSK-ITILTNGPLTNLAQIIGLQ 582
P QP AV+ + + E I K +T++ GPLTN+A ++
Sbjct: 95 ----------------PSF-QPQAVNAVELMAEKIRQSDKPVTLVPTGPLTNIALLLASH 137
Query: 583 NS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
+ I+ + ++GG G N + AEFN+F+DP AA VF+S + I +
Sbjct: 138 AELHAKIERIVLMGGAAGVGN---------WTPAAEFNIFVDPEAADIVFKSGIPITMCG 188
Query: 642 LHMQRRVASFFKILHKLR 659
L + + + + ++R
Sbjct: 189 LDVTHQAQIMDEDIERIR 206
>gi|50123342|ref|YP_052509.1| nucleoside hydrolase protein [Pectobacterium atrosepticum SCRI1043]
gi|49613868|emb|CAG77320.1| putative nucleoside hydrolase protein [Pectobacterium atrosepticum
SCRI1043]
Length = 317
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 102/242 (42%), Gaps = 48/242 (19%)
Query: 408 PVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDI 467
P++ D D D +AL+ P ++++GI A TV ++ + R DI
Sbjct: 5 PIIIDCDPGIDDAIALLSAFVAPE--LDIRGICTVCGNQALEKTVRNALQIVELGQRTDI 62
Query: 468 PVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARD-LPRSPRRYTAE 526
PV FA PI G + ++ GL + LP ++ A+
Sbjct: 63 PV-----FAGCHRPLLREPIHGQFHGES---------------GLGQTVLPEPQKQAEAQ 102
Query: 527 NSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSS 586
++V F +Q RQ +I G+ IT+ T GPLTN+A + L+ +
Sbjct: 103 HAVSFIIAQ------CRQ------------AIADGTPITLCTLGPLTNVA--MALRMAPE 142
Query: 587 VIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQR 646
+ + + G E GN S +EFNM DP AAK VF+S + + +PL +
Sbjct: 143 IADGIARIVMMGGAYREAGN-----RSLTSEFNMIADPQAAKVVFDSSIALVALPLDVTH 197
Query: 647 RV 648
+V
Sbjct: 198 QV 199
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 61/151 (40%), Gaps = 35/151 (23%)
Query: 63 GLRKAFLPQGGRKYAPLRQPTAQQVLI-------NAISAG-PITVFVMGSHTNFAIFLMN 114
GL + LP+ P +Q AQ + AI+ G PIT+ +G TN A+ L
Sbjct: 86 GLGQTVLPE------PQKQAEAQHAVSFIIAQCRQAIADGTPITLCTLGPLTNVAMALRM 139
Query: 115 NPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAA 174
P + I I +MGGA R S S EFN+ +DP AA
Sbjct: 140 APEIADGIARIVMMGGAYREAGNRSLTS---------------------EFNMIADPQAA 178
Query: 175 YTVLHSGIPVTIIPLDATKTIPVSENFFVEF 205
V S I + +PLD T + ++ F
Sbjct: 179 KVVFDSSIALVALPLDVTHQVILTPELVARF 209
>gi|297563303|ref|YP_003682277.1| inosine/uridine-preferring nucleoside hydrolase [Nocardiopsis
dassonvillei subsp. dassonvillei DSM 43111]
gi|296847751|gb|ADH69771.1| Inosine/uridine-preferring nucleoside hydrolase [Nocardiopsis
dassonvillei subsp. dassonvillei DSM 43111]
Length = 321
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 148/365 (40%), Gaps = 65/365 (17%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P+V D D + D +AL+ L P +L+ I + + V + L + GR
Sbjct: 1 MTTPLVIDTDTAQDDCVALLIGLLDPEA--DLRAITMVAGNVGFDQQVRNAFLTLSVAGR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLP--RSPRR 522
+GEV P GC+ P S + D GL+ D+ + R
Sbjct: 59 ------------LGEV----PVYLGCRRPLVRPWVSAENVHGDGSGGLSMDVSGLETERE 102
Query: 523 YTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ 582
+ A+ VR A PG +++I+ GPLTN+A
Sbjct: 103 HAADALVRLAAEN------------------------PG-ELSIVAIGPLTNIAMAAAKD 137
Query: 583 -NSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
+ + + +Y++GG+ +N +GN+ + AEFN ++DP +AKAVF + EI ++P
Sbjct: 138 PDFARNVGALYVMGGS---NNGRGNI-----TAAAEFNFYVDPESAKAVFAAGFEITVVP 189
Query: 642 LH-MQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSH--HSYHHVDTFLGEVL 698
+ R A F + TP S F R+ + +S H D+ VL
Sbjct: 190 WDPLTLRQAVFGQERLDALAALGTPLSDFFGRVCAATLEFDRSVGIDGTTHPDSLTAAVL 249
Query: 699 GAVILGGNPHLNQTYKIKSLEIISDGDISKVGQIIVNQEQG--KLVKVLESLNVAVYYDH 756
+P L + +++ + G++++ + G V+E ++ ++DH
Sbjct: 250 ------LHPELVRRSARYHVDVETAGELTRGYSAMSWGVHGLEANATVIEEIDADGFFDH 303
Query: 757 FAEVL 761
A +L
Sbjct: 304 LAGLL 308
Score = 47.0 bits (110), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 21/104 (20%)
Query: 87 VLINAISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSE 146
V + A + G +++ +G TN A+ +P +N+ +YVMGG +N+ +
Sbjct: 109 VRLAAENPGELSIVAIGPLTNIAMAAAKDPDFARNVGALYVMGG---------SNNGR-- 157
Query: 147 QCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLD 190
GN+ AEFN + DP +A V +G +T++P D
Sbjct: 158 -----GNI-----TAAAEFNFYVDPESAKAVFAAGFEITVVPWD 191
>gi|160876874|ref|YP_001556190.1| ribonucleoside hydrolase 1 [Shewanella baltica OS195]
gi|378710088|ref|YP_005274982.1| ribosylpyrimidine nucleosidase [Shewanella baltica OS678]
gi|418022203|ref|ZP_12661190.1| Ribosylpyrimidine nucleosidase [Shewanella baltica OS625]
gi|160862396|gb|ABX50930.1| Inosine/uridine-preferring nucleoside hydrolase [Shewanella baltica
OS195]
gi|315269077|gb|ADT95930.1| Ribosylpyrimidine nucleosidase [Shewanella baltica OS678]
gi|353538428|gb|EHC07983.1| Ribosylpyrimidine nucleosidase [Shewanella baltica OS625]
Length = 318
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 69/148 (46%), Gaps = 31/148 (20%)
Query: 51 PVGQRLYVNTNY----GLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGS 104
P+ ++L + N GL LP+ ++P + TA +++ I S P+T+ G
Sbjct: 70 PLTRQLIIADNVHGETGLDGPALPE--PSFSP-QAITAVELMAQQIRQSTQPVTLVPTGP 126
Query: 105 HTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAE 164
TN A+ L ++ L IE I +MGGA +GN P AE
Sbjct: 127 LTNIALLLASHSELHPKIERIVLMGGAA-----------------GVGNW-----TPAAE 164
Query: 165 FNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
FNIF DP AA V SGIP+T+ LD T
Sbjct: 165 FNIFVDPEAADIVFKSGIPITMCGLDVT 192
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 104/258 (40%), Gaps = 55/258 (21%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M + ++ D D D +ALI L P +L+ L + S+ T++ +L ++ R
Sbjct: 1 MTRHIILDCDPGHDDAIALILALAHP-DLVPL-AVTTSAGNQTPDKTLNNALRILTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDT-LYGLARDLPR-SPRR 522
DIPV GG L + +T L G A P SP+
Sbjct: 59 GDIPVA-----------------GGATKPLTRQLIIADNVHGETGLDGPALPEPSFSPQA 101
Query: 523 YTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ 582
TA V A Q I +S +P +T++ GPLTN+A ++
Sbjct: 102 ITA---VELMAQQ------------------IRQSTQP---VTLVPTGPLTNIALLLASH 137
Query: 583 NS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
+ I+ + ++GG G N + AEFN+F+DP AA VF+S + I +
Sbjct: 138 SELHPKIERIVLMGGAAGVGNW---------TPAAEFNIFVDPEAADIVFKSGIPITMCG 188
Query: 642 LHMQRRVASFFKILHKLR 659
L + + + ++R
Sbjct: 189 LDVTHQAQIMDADIERIR 206
>gi|350547205|ref|ZP_08916537.1| ribonucleoside hydrolase RihC [Mycoplasma iowae 695]
gi|349503232|gb|EGZ30843.1| ribonucleoside hydrolase RihC [Mycoplasma iowae 695]
Length = 305
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 87/189 (46%), Gaps = 36/189 (19%)
Query: 491 KYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENSVRFGASQDNDDPELRQPL---- 546
+Y K IP+ G SP T E + D + ++P+
Sbjct: 56 EYKKDIPVAKGS---------------ESPLINTLETCESVHGNTGMDGYDFKKPIKSCL 100
Query: 547 ---AV-DVWKSIVESIEPGSKITILTNGPLTNLAQIIGL-QNSSSVIQDVYIVGGNKGQD 601
AV +++K + ES P ITI+ PLTN+A ++ L ++ I+ + ++GG +
Sbjct: 101 NNHAVNEIYKILKESDTP---ITIVALAPLTNIALLLSLYKDVKHKIKRIVLMGGAINRG 157
Query: 602 NEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDR 661
N SS AEFN ++DP AAK V +SKL+I ++PL + + + K ++
Sbjct: 158 N---------SSPSAEFNFYIDPEAAKIVIDSKLDIVIVPLEIGMKSLIYKDDCEKFKNL 208
Query: 662 KKTPESVFS 670
KT E ++
Sbjct: 209 NKTGEIFYN 217
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 46/98 (46%), Gaps = 22/98 (22%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
S PIT+ + TN A+ L +K I+ I +MGGAI N NSS
Sbjct: 115 SDTPITIVALAPLTNIALLLSLYKDVKHKIKRIVLMGGAI-----NRGNSS--------- 160
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLD 190
P AEFN + DP AA V+ S + + I+PL+
Sbjct: 161 --------PSAEFNFYIDPEAAKIVIDSKLDIVIVPLE 190
>gi|395496414|ref|ZP_10427993.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas sp.
PAMC 25886]
Length = 360
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 23/135 (17%)
Query: 70 PQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYV 127
P G + LR+ TA Q +++++ A P +T+ +G TN A+ + + P + I+ I
Sbjct: 136 PDGLATHTTLRKETAAQFIVDSVRANPHEVTILAVGPLTNIALAIRSAPDIVPLIKRIVY 195
Query: 128 MGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTII 187
MGGA+ P ++ P AEFN + DP AA VL S I I
Sbjct: 196 MGGALE---------------------IPGNTTPAAEFNWWFDPEAAKIVLRSPIEHVIF 234
Query: 188 PLDATKTIPVSENFF 202
P D + + ++ +
Sbjct: 235 PNDVCEKVTFDKSVY 249
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 554 IVESIEPG-SKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPS 612
IV+S+ ++TIL GPLTN+A + ++++ ++ + + G GN T P+
Sbjct: 154 IVDSVRANPHEVTILAVGPLTNIA--LAIRSAPDIVPLIKRIVYMGGALEIPGN--TTPA 209
Query: 613 SKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
AEFN + DP AAK V S +E + P + +V
Sbjct: 210 ---AEFNWWFDPEAAKIVLRSPIEHVIFPNDVCEKV 242
>gi|418475836|ref|ZP_13045203.1| nucleoside hydrolase [Streptomyces coelicoflavus ZG0656]
gi|371543548|gb|EHN72341.1| nucleoside hydrolase [Streptomyces coelicoflavus ZG0656]
Length = 326
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 56/119 (47%), Gaps = 27/119 (22%)
Query: 77 APLRQPT---AQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGA 131
AP R P A +L I A P +T+ TN A+ L +P + NIE I MGGA
Sbjct: 102 APTRAPADVDAVTLLRREILASPRPVTLIPTAPLTNIALLLRTHPEVTGNIERIVFMGGA 161
Query: 132 IRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLD 190
+ + GN + P AEFN++ DP AA +L +G+P+T+ LD
Sbjct: 162 V-----------------ATGN-----ATPVAEFNVWHDPEAAAILLTAGVPITMYGLD 198
>gi|294497332|ref|YP_003561032.1| putative inosine-uridine preferring nucleoside hydrolase [Bacillus
megaterium QM B1551]
gi|294347269|gb|ADE67598.1| putative inosine-uridine preferring nucleoside hydrolase [Bacillus
megaterium QM B1551]
Length = 314
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 101/252 (40%), Gaps = 35/252 (13%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMS---TAGECRYRQAIPVGQRLY 57
++ DD V V G I +G + P + Q IID+ S + R P +
Sbjct: 22 LLQMDD--VKVTGVSVIPADGYLEPGISASQKIIDRFGSYDIEVAKSTSRGMNPFPKEWR 79
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
++T Y L + G + Q A LI + +AG T+ G T+ A L
Sbjct: 80 MHTFYVDALPILNEKGEVQTKISQLPAHDHLIETLRHTAGKTTLLFTGPLTDLARALEKA 139
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P +++ I+ + MGG + +GN+ + + AE+N F DP A
Sbjct: 140 PEIEEKIDKLVWMGGTFQE----------------VGNVQEPEHDGTAEWNAFWDPEAVA 183
Query: 176 TVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPF- 234
V S I + ++ L++T +P++ + + + ++ + + ++ PP
Sbjct: 184 KVWESRIKIEMVALESTNQVPLTPAI-------RQMWASLRRYEGVDFVGQCYAACPPLV 236
Query: 235 ----HEAYCMWD 242
+ Y +WD
Sbjct: 237 HVETNSTYYLWD 248
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 93/206 (45%), Gaps = 24/206 (11%)
Query: 563 KITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFL 622
K T+L GPLT+LA+ L+ + + + + + G E GNV AE+N F
Sbjct: 120 KTTLLFTGPLTDLAR--ALEKAPEIEEKIDKLVWMGGTFQEVGNVQEPEHDGTAEWNAFW 177
Query: 623 DPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQ 682
DP A V+ES+++I+++ L +V I S R +G+ + Q
Sbjct: 178 DPEAVAKVWESRIKIEMVALESTNQVPLTPAIRQMWA----------SLRRYEGVDFVGQ 227
Query: 683 SHHS---YHHVDT----FLGEVLGAVILGGNPHLNQTYKIKSLEIISDGDISKVGQIIVN 735
+ + HV+T +L +VL G + + K+K++ I + G+ ++
Sbjct: 228 CYAACPPLVHVETNSTYYLWDVLTTAFTGNSTLV----KVKTVSSIVHTETPSQGRTEIS 283
Query: 736 QEQGKLVKVLESLNVAVYYDHFAEVL 761
QE G+ V V+ + ++ + +++
Sbjct: 284 QE-GRPVDVVYDVTAEAFFTYITDLM 308
>gi|307130441|ref|YP_003882457.1| Inosine-uridine preferring nucleoside hydrolase [Dickeya dadantii
3937]
gi|306527970|gb|ADM97900.1| Inosine-uridine preferring nucleoside hydrolase [Dickeya dadantii
3937]
Length = 322
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 21/97 (21%)
Query: 96 PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY 155
PIT +G TN A+ L+ +P + + I + M A ++G+
Sbjct: 121 PITFCAIGPMTNLALALIQHPDVARGIRQVVSMSCAF----------------TALGH-- 162
Query: 156 PDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
P+AEFNI++DP AA V SGIP+ I+PLD T
Sbjct: 163 ---RTPWAEFNIYADPHAASRVFGSGIPLVIMPLDMT 196
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 96/238 (40%), Gaps = 50/238 (21%)
Query: 409 VVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDIP 468
++ D D D +AL L P + + G+ V + A T+ ++ + GRDD+P
Sbjct: 6 IIIDTDPGVDDAIALWLALASPE--LEVLGVTVVAGNVALENTLANARRIVALSGRDDVP 63
Query: 469 VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENS 528
V G K P IG +Y K +G+ SD L +P + R E++
Sbjct: 64 VFAG---------AKKPLIGPQRYGKYAHIGAF----SDEL------VPTAESRVAQEHA 104
Query: 529 VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVI 588
V F E + P IT GP+TNLA ++I
Sbjct: 105 VDFIVCTARRAAEEQNP------------------ITFCAIGPMTNLAL--------ALI 138
Query: 589 QDVYIVGGNKGQDNEKGNVFTVPSSK--YAEFNMFLDPLAAKAVFESKLEIKLIPLHM 644
Q + G + Q FT + +AEFN++ DP AA VF S + + ++PL M
Sbjct: 139 QHPDVARGIR-QVVSMSCAFTALGHRTPWAEFNIYADPHAASRVFGSGIPLVIMPLDM 195
>gi|305681742|ref|ZP_07404546.1| inosine-uridine preferring nucleoside hydrolase [Corynebacterium
matruchotii ATCC 14266]
gi|305658215|gb|EFM47718.1| inosine-uridine preferring nucleoside hydrolase [Corynebacterium
matruchotii ATCC 14266]
Length = 352
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 26/105 (24%)
Query: 98 TVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPD 157
T+ + G TN A +L ++P ++ IY+MGGA LYP
Sbjct: 142 TLIITGPATNLATYLRDHPAHQR----IYLMGGAY---------------------LYPG 176
Query: 158 DSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFF 202
++ P AE+N + DP AA V H+ IP+T+ PL ++ PV+E+
Sbjct: 177 NTTPTAEWNTWVDPHAAAEVFHTTIPITVCPL-GVRSQPVTESML 220
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 108/286 (37%), Gaps = 53/286 (18%)
Query: 402 KKLMGKPVVFDIDMSAGDFLALIYLLKLPVE-LINLKGILVSSTGWATSATVDVVYDLLH 460
+K PV+ D D D LALIYL L + L+ + ++ + T +L
Sbjct: 4 RKNNSHPVLIDCDAGIDDALALIYLAGLAAAGEVQLRAVTTTAGNVDATQTAFNSAHILR 63
Query: 461 MMGRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSP 520
+ G ++PV G +PL + ++ +GL +P
Sbjct: 64 LCGLPNVPVA-----------------AGVPTPLVVPLVTTP--ETHGPHGLGYVIPPE- 103
Query: 521 RRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIG 580
T+ +++ + D + P A W + + T++ GP TNLA +
Sbjct: 104 ---TSTDTISVTPGERPDTVPMGVPAADTGWDDLWRA---NRDATLIITGPATNLATYL- 156
Query: 581 LQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLI 640
Q +Y++GG ++ ++ AE+N ++DP AA VF + + I +
Sbjct: 157 --RDHPAHQRIYLMGG--------AYLYPGNTTPTAEWNTWVDPHAAAEVFHTTIPITVC 206
Query: 641 PLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLM-TLQQSHH 685
PL +R + T +FS LL L +HH
Sbjct: 207 PL--------------GVRSQPVTESMLFSPDLLDAACDILAAAHH 238
>gi|254450967|ref|ZP_05064404.1| pyrimidine-specific ribonucleoside hydrolase RihA [Octadecabacter
arcticus 238]
gi|198265373|gb|EDY89643.1| pyrimidine-specific ribonucleoside hydrolase RihA [Octadecabacter
arcticus 238]
Length = 312
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 57/126 (45%), Gaps = 24/126 (19%)
Query: 70 PQGGRKYAPLRQPTAQQVLINAISAGP---ITVFVMGSHTNFAIFLMNNPHLKKNIEHIY 126
PQ L+ A +I+ + A P +T+ +G TN A+ L P +K I I
Sbjct: 90 PQLAPPTMALQDQHAVDWIIDTLRAAPLASVTLCPLGPLTNIAMALQRAPDIKPAIAEIV 149
Query: 127 VMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTI 186
+MGG F N + P AEFNI+ DP AA V SG+P+T+
Sbjct: 150 LMGGGF----FEGGNIT-----------------PTAEFNIYVDPHAADIVFKSGLPLTV 188
Query: 187 IPLDAT 192
+PLD T
Sbjct: 189 MPLDMT 194
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 26/157 (16%)
Query: 501 GGFLDSDTLYGLARDLPRSPRRYTAENSVRFGASQDNDDPELRQPL-------AVDVWKS 553
GF D+ G R + R+ TAE+ D P+L P AVD W
Sbjct: 56 AGFPDTLVFAGCDRPINRA--LVTAEH---VHGKTGLDGPQLAPPTMALQDQHAVD-WII 109
Query: 554 IVESIEPGSKITILTNGPLTNLAQIIGLQNSSSV---IQDVYIVGGNKGQDNEKGNVFTV 610
P + +T+ GPLTN+A + LQ + + I ++ ++GG E GN+
Sbjct: 110 DTLRAAPLASVTLCPLGPLTNIA--MALQRAPDIKPAIAEIVLMGGGF---FEGGNI--- 161
Query: 611 PSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
+ AEFN+++DP AA VF+S L + ++PL M +
Sbjct: 162 --TPTAEFNIYVDPHAADIVFKSGLPLTVMPLDMTHK 196
>gi|225018738|ref|ZP_03707930.1| hypothetical protein CLOSTMETH_02688 [Clostridium methylpentosum
DSM 5476]
gi|224948466|gb|EEG29675.1| hypothetical protein CLOSTMETH_02688 [Clostridium methylpentosum
DSM 5476]
Length = 313
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 66/158 (41%), Gaps = 33/158 (20%)
Query: 47 RQAIPVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQP--TAQQVLINAISAG--------- 95
R+ IPV Q LR A G P+ P TA A+ A
Sbjct: 56 REEIPVYQGAPKPLVRELRIAAEVHGKSGVGPVELPESTAPHTTKTALEASARFLSESEQ 115
Query: 96 PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY 155
P+ + G TN AI L+ +P LK I+ I +MGGA F+ N++
Sbjct: 116 PVEILATGPLTNIAILLVAHPELKHKIKGITLMGGA-----FHGGNTT------------ 158
Query: 156 PDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
P AEFN+ DP AA V SG+P+ + LD T+
Sbjct: 159 -----PVAEFNMAVDPEAANLVFRSGVPIVMFGLDVTR 191
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 88/205 (42%), Gaps = 49/205 (23%)
Query: 457 DLLHMMGRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDL 516
+LL +MGR++IPV G PK P + + A + SG G +L
Sbjct: 49 NLLSLMGREEIPVYQGA--------PK-PLVRELRIAAEVHGKSG--------VGPV-EL 90
Query: 517 PRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLA 576
P S +T + ++ A + + ES +P + IL GPLTN+A
Sbjct: 91 PESTAPHTTKTALEASA------------------RFLSESEQP---VEILATGPLTNIA 129
Query: 577 -QIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ I+ + ++GG N ++ AEFNM +DP AA VF S +
Sbjct: 130 ILLVAHPELKHKIKGITLMGGAFHGGN---------TTPVAEFNMAVDPEAANLVFRSGV 180
Query: 636 EIKLIPLHMQRRVASFFKILHKLRD 660
I + L + R+ + + + +LR+
Sbjct: 181 PIVMFGLDVTRQAQCYREDIERLRE 205
>gi|256380055|ref|YP_003103715.1| Inosine/uridine-preferring nucleoside hydrolase [Actinosynnema
mirum DSM 43827]
gi|255924358|gb|ACU39869.1| Inosine/uridine-preferring nucleoside hydrolase [Actinosynnema
mirum DSM 43827]
Length = 310
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 23/108 (21%)
Query: 96 PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY 155
P+ + +G TN A+ L +P LK IE + VMGGAI GN+
Sbjct: 119 PVVIAAVGPLTNVALLLAAHPSLKPKIERLVVMGGAI-----------------GAGNI- 160
Query: 156 PDDSNPYAEFNIFSDPFAAYTVL-HSGIPVTIIPLDATKTIPVSENFF 202
+P AEFN + DP AA VL +P T++P+D T V +
Sbjct: 161 ----SPRAEFNAWCDPEAARRVLVVEDVPTTLVPMDLTMRCSVDGPWL 204
>gi|426192825|gb|EKV42760.1| hypothetical protein AGABI2DRAFT_228399 [Agaricus bisporus var.
bisporus H97]
Length = 345
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 79/182 (43%), Gaps = 30/182 (16%)
Query: 537 NDDPELRQPLAVDVWKSIVESIE-------------PGSKITILTNGPLTNLAQIIG--- 580
N+DP + + VD V ++E G K+T++T GP+TN+A +
Sbjct: 79 NEDPSILKRFVVDECGEQVRALEGMIKEIKKCWKNGKGEKVTLVTTGPMTNVALFVSCYE 138
Query: 581 -LQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKL 639
++++ +GG G N S AE+N+ DP A + V + +++ +
Sbjct: 139 DFVEEGGAVEEIVFMGGGVGLGNR---------SAVAEYNILTDPHATQIVLDCPVKVTM 189
Query: 640 IPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLG 699
IP+++ + +I ++L P SV +Q L L+ H+ + + TF
Sbjct: 190 IPINVTHTAIATHEIQYRLLTNSTAP-SVLAQELPPAKTRLR---HTLNTIITFFASTYK 245
Query: 700 AV 701
+V
Sbjct: 246 SV 247
>gi|226508086|ref|NP_001141948.1| uncharacterized protein LOC100274097 [Zea mays]
gi|194706556|gb|ACF87362.1| unknown [Zea mays]
gi|322718720|gb|ADX07371.1| nucleoside N-ribohydrolase 2 [Zea mays]
gi|413921790|gb|AFW61722.1| hypothetical protein ZEAMMB73_926916 [Zea mays]
Length = 325
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 76/184 (41%), Gaps = 27/184 (14%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISA--GPITVFVMGSHTNFAIFLMN 114
+V+ + G+ FLP K + +A ++N +S G ++V +G TN A+ +
Sbjct: 89 FVHGSDGIGNLFLPAPSAKKV---EESAADFMVNKVSEFPGEVSVLALGPLTNVALAIKR 145
Query: 115 NPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAA 174
+P + I V+GGA + NP AE NI DP AA
Sbjct: 146 DPSFASKVNKIVVLGGAF---------------------FVAGNVNPAAEANILGDPEAA 184
Query: 175 YTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPF 234
V SG V ++ ++ T + +++ +E R A + ++ K RD S F
Sbjct: 185 DIVFTSGADVIVVGINITTQVCLTDEGLLEL-RNSKGKHAPFLSETCKFYRDWHVKSDGF 243
Query: 235 HEAY 238
H +
Sbjct: 244 HGIF 247
>gi|126172909|ref|YP_001049058.1| ribonucleoside hydrolase 1 [Shewanella baltica OS155]
gi|386339713|ref|YP_006036079.1| ribosylpyrimidine nucleosidase [Shewanella baltica OS117]
gi|166226415|sp|A3D0C6.1|RIHA_SHEB5 RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|125996114|gb|ABN60189.1| Purine nucleosidase [Shewanella baltica OS155]
gi|334862114|gb|AEH12585.1| Ribosylpyrimidine nucleosidase [Shewanella baltica OS117]
Length = 318
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 68/148 (45%), Gaps = 31/148 (20%)
Query: 51 PVGQRLYVNTNY----GLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGS 104
P+ + L + N GL LP+ ++P + TA +++ I S P+T+ G
Sbjct: 70 PLTRELIIADNVHGETGLDGPALPE--PSFSP-QAITAVELMAQQIRQSTQPVTLVPTGP 126
Query: 105 HTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAE 164
TN A+ L ++ L IE I +MGGA +GN P AE
Sbjct: 127 LTNIALLLASHSELHPKIERIVLMGGAA-----------------GVGNW-----TPAAE 164
Query: 165 FNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
FNIF DP AA V SGIP+T+ LD T
Sbjct: 165 FNIFVDPEAADIVFKSGIPITMCGLDVT 192
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 105/258 (40%), Gaps = 55/258 (21%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M + ++ D D D +ALI L P +L+ L + S+ T++ +L ++ R
Sbjct: 1 MTRHIILDCDPGHDDAIALILALAHP-DLVPL-AVTTSAGNQTPDKTLNNALRILTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDT-LYGLARDLPR-SPRR 522
DIPV GG L + +T L G A P SP+
Sbjct: 59 GDIPVA-----------------GGATKPLTRELIIADNVHGETGLDGPALPEPSFSPQA 101
Query: 523 YTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ 582
TA V A Q I +S +P +T++ GPLTN+A ++
Sbjct: 102 ITA---VELMAQQ------------------IRQSTQP---VTLVPTGPLTNIALLLASH 137
Query: 583 NS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
+ I+ + ++GG G N + AEFN+F+DP AA VF+S + I +
Sbjct: 138 SELHPKIERIVLMGGAAGVGN---------WTPAAEFNIFVDPEAADIVFKSGIPITMCG 188
Query: 642 LHMQRRVASFFKILHKLR 659
L + + + + ++R
Sbjct: 189 LDVTHQAQIMDEDIERIR 206
>gi|416125910|ref|ZP_11596257.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis FRI909]
gi|319400653|gb|EFV88878.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis FRI909]
Length = 313
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 96/198 (48%), Gaps = 10/198 (5%)
Query: 563 KITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFL 622
K+T+L GPLT+LA+ I NS +++++ + G +KGNV AE+N F
Sbjct: 120 KVTLLFTGPLTDLAKAINYDNS--ILKNIKKLVWMGGTFLDKGNVEEPEHDGTAEWNAFW 177
Query: 623 DPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQ 682
DP A K V +S + + ++ L +V ++ D+++ F L +
Sbjct: 178 DPEAVKVVLDSDMIVDIVALESTNQVPLTMEVRQMWADKRQYLGVDF---LGTSYAAVPP 234
Query: 683 SHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLV 742
H + FL +VL + G+P+L ++ K+K ++++S G G+ E G+ V
Sbjct: 235 LTHFVTNSTYFLWDVLTTAYV-GSPNLVESTKLK-IDVVSQG--PSQGRTF-QSENGREV 289
Query: 743 KVLESLNVAVYYDHFAEV 760
+V+ +N ++ + ++
Sbjct: 290 QVITDVNKQAFFKYITDL 307
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 64/151 (42%), Gaps = 28/151 (18%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
+T+ G T+ A + + + KNI+ + MGG GN+
Sbjct: 121 VTLLFTGPLTDLAKAINYDNSILKNIKKLVWMGGTFLDK----------------GNVEE 164
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQY 216
+ + AE+N F DP A VL S + V I+ L++T +P++ E RQ + +
Sbjct: 165 PEHDGTAEWNAFWDPEAVKVVLDSDMIVDIVALESTNQVPLT------MEVRQ-MWADKR 217
Query: 217 CFQSLKMIRDTWSGSPPF-----HEAYCMWD 242
+ + + +++ PP + Y +WD
Sbjct: 218 QYLGVDFLGTSYAAVPPLTHFVTNSTYFLWD 248
>gi|375096522|ref|ZP_09742787.1| Inosine-uridine nucleoside N-ribohydrolase [Saccharomonospora
marina XMU15]
gi|374657255|gb|EHR52088.1| Inosine-uridine nucleoside N-ribohydrolase [Saccharomonospora
marina XMU15]
Length = 323
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 69/162 (42%), Gaps = 28/162 (17%)
Query: 45 RYRQAIPVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGS 104
++RQA PV + + R LP R + + L+ A S P+T+ +G
Sbjct: 75 QWRQARPV----HGDDGLSGRAHLLPDPERDVEGIDAVSLLARLL-AESGEPVTIAAIGP 129
Query: 105 HTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAE 164
TN A L +P + I + VMGGA+ GN S AE
Sbjct: 130 LTNIATLLAAHPGAAERIARVVVMGGAL-----------------GYGN-----STAAAE 167
Query: 165 FNIFSDPFAAYTVLHSG-IPVTIIPLDATKTIPVSENFFVEF 205
FNIFSDP AA+ VL G + ++P+D T VS ++
Sbjct: 168 FNIFSDPEAAHRVLTGGEVSCVLVPMDLTYRCAVSADWLTTL 209
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 11/93 (11%)
Query: 559 EPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAE 617
E G +TI GPLTN+A ++ ++ I V ++GG G N S+ AE
Sbjct: 117 ESGEPVTIAAIGPLTNIATLLAAHPGAAERIARVVVMGGALGYGN---------STAAAE 167
Query: 618 FNMFLDPLAAKAVFE-SKLEIKLIPLHMQRRVA 649
FN+F DP AA V ++ L+P+ + R A
Sbjct: 168 FNIFSDPEAAHRVLTGGEVSCVLVPMDLTYRCA 200
>gi|406676343|ref|ZP_11083529.1| pyrimidine-specific ribonucleoside hydrolase rihA [Aeromonas
veronii AMC35]
gi|404626566|gb|EKB23376.1| pyrimidine-specific ribonucleoside hydrolase rihA [Aeromonas
veronii AMC35]
Length = 311
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 76/180 (42%), Gaps = 37/180 (20%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
SA P+T+ G TN A+ L +P LK I I +MGGA + G
Sbjct: 115 SAEPVTLVPTGPLTNIALLLAAHPELKPRIARIVLMGGAAGA-----------------G 157
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFER-RQNT 211
N P AEFNI+ DP AA V SGI +T+ LD T V + + ER R T
Sbjct: 158 NW-----TPAAEFNIYVDPEAADMVFKSGIAITMCGLDVTHEAQVMDE---DIERVRAIT 209
Query: 212 YEAQYCFQSLK---MI--RD-TW--SGSP---PFHEAYCMWDSFMAGVALSIMLNSSSHN 260
C L MI RD W +G+P P A+ + GV + + +S +
Sbjct: 210 NPVAQCVAGLLDFFMIYHRDPKWGFAGAPLHDPCTIAWLLAPELFHGVECRVDIETSGEH 269
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 105/257 (40%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M PV+ D D D +ALI L P + + + S+ T++ +L ++GR
Sbjct: 1 MALPVILDCDPGHDDAIALILALASPE--LKVLAVTTSAGNQTPDKTLNNALRILTLLGR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DDIPV G PK PL + +D ++G + D P+ P
Sbjct: 59 DDIPVAAG--------APK-------------PLARE-LIIADNVHGESGLDGPKLPDPA 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A Q EL K + ES EP +T++ GPLTN+A ++
Sbjct: 97 FA--------PQGMTGIELMA-------KCLRESAEP---VTLVPTGPLTNIALLLAAHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
I + ++GG G N + AEFN+++DP AA VF+S + I + L
Sbjct: 139 ELKPRIARIVLMGGAAGAGN---------WTPAAEFNIYVDPEAADMVFKSGIAITMCGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + ++R
Sbjct: 190 DVTHEAQVMDEDIERVR 206
>gi|312868945|ref|ZP_07729125.1| putative cytidine/uridine-specific hydrolase [Lactobacillus oris
PB013-T2-3]
gi|311095509|gb|EFQ53773.1| putative cytidine/uridine-specific hydrolase [Lactobacillus oris
PB013-T2-3]
Length = 302
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 69/147 (46%), Gaps = 23/147 (15%)
Query: 73 GRKYAPLRQPTAQQVLINAISA-GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGA 131
G Y + TA + L +AI A +T+ GS+TN A+ P +K +I+ I MGG+
Sbjct: 92 GNDYGQPIKKTAVEALHDAIMAEDEVTLVPTGSYTNIALLFSEYPEVKNHIKRIVAMGGS 151
Query: 132 IRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDA 191
+ S GN+ AEFN+F+DP AA + +SGIP+ ++ LD
Sbjct: 152 M-----------------SGGNM-----TSVAEFNVFTDPDAARIMYNSGIPIVMVGLDV 189
Query: 192 TKTIPVSENFFVEFERRQNTYEAQYCF 218
T ++++ + + T E +
Sbjct: 190 TLKALLTKDTIEKLGQMNKTGEMLHAL 216
>gi|357148886|ref|XP_003574927.1| PREDICTED: probable uridine nucleosidase 1-like [Brachypodium
distachyon]
Length = 327
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 77/172 (44%), Gaps = 27/172 (15%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISA--GPITVFVMGSHTNFAIFLMN 114
+V+ + GL LP K + A + ++N +S G ITV +G TN A+ +
Sbjct: 91 FVHGSDGLGNLSLPAPTTKKV---EENAAEFMVNKVSEFPGEITVLALGPLTNVALAIKR 147
Query: 115 NPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAA 174
+P ++ I V+GGA + GN+ NP AE NI+ DP AA
Sbjct: 148 DPSFASKVKRIVVLGGAFFA----------------AGNV-----NPAAEANIYGDPDAA 186
Query: 175 YTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRD 226
V SG + ++ ++ T + +++ +E + + + AQ+ K RD
Sbjct: 187 DVVFTSGADIDVVGINITTQVCLTDEDLLELKNSKGKH-AQFLCDMCKFYRD 237
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 111/256 (43%), Gaps = 51/256 (19%)
Query: 409 VVFDIDMSAGDFLALIYLLKLP-VELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDI 467
V+ D D D + ++ + P VE+I L I + T +AT + + L G ++
Sbjct: 15 VIVDTDPGIDDSMTILMAFEEPSVEIIGLTTIFGNVT--TENATRNALL-LCERAGHPEV 71
Query: 468 PVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAEN 527
PV G +P+ P+ G IP + SD L L+ LP + EN
Sbjct: 72 PVAEG--------SPE--PLKG-----GIPRVADFVHGSDGLGNLS--LPAPTTKKVEEN 114
Query: 528 SVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS-SS 586
+ F ++ ++ P +IT+L GPLTN+A I S +S
Sbjct: 115 AAEFMVNKVSEFP---------------------GEITVLALGPLTNVALAIKRDPSFAS 153
Query: 587 VIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQR 646
++ + ++G G GNV + AE N++ DP AA VF S +I ++ +++
Sbjct: 154 KVKRIVVLG---GAFFAAGNV-----NPAAEANIYGDPDAADVVFTSGADIDVVGINITT 205
Query: 647 RVASFFKILHKLRDRK 662
+V + L +L++ K
Sbjct: 206 QVCLTDEDLLELKNSK 221
>gi|242243916|ref|ZP_04798359.1| purine nucleosidase [Staphylococcus epidermidis W23144]
gi|418614985|ref|ZP_13177941.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis VCU118]
gi|418634521|ref|ZP_13196915.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis VCU129]
gi|420175852|ref|ZP_14682282.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIHLM061]
gi|420176773|ref|ZP_14683178.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIHLM057]
gi|420181275|ref|ZP_14687479.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIHLM053]
gi|420191120|ref|ZP_14697055.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIHLM037]
gi|420191539|ref|ZP_14697455.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIHLM023]
gi|420199245|ref|ZP_14704925.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIHLM031]
gi|420205120|ref|ZP_14710655.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIHLM015]
gi|242232549|gb|EES34861.1| purine nucleosidase [Staphylococcus epidermidis W23144]
gi|374818740|gb|EHR82887.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis VCU118]
gi|374837051|gb|EHS00624.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis VCU129]
gi|394242539|gb|EJD87930.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIHLM061]
gi|394246975|gb|EJD92226.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIHLM053]
gi|394252076|gb|EJD97121.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIHLM057]
gi|394257929|gb|EJE02828.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIHLM037]
gi|394266572|gb|EJE11204.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIHLM023]
gi|394271200|gb|EJE15698.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIHLM015]
gi|394272401|gb|EJE16863.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIHLM031]
Length = 313
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 96/198 (48%), Gaps = 10/198 (5%)
Query: 563 KITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFL 622
K+T+L GPLT+LA+ I NS +++++ + G +KGNV AE+N F
Sbjct: 120 KVTLLFTGPLTDLAKAINYDNS--ILKNIEKLVWMGGTFLDKGNVEEPEHDGTAEWNAFW 177
Query: 623 DPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQ 682
DP A K V +S + + ++ L +V ++ D+++ F L +
Sbjct: 178 DPEAVKVVLDSDMIVDIVALESTNQVPLTMEVRQMWADKRQYLGVDF---LGTSYAAVPP 234
Query: 683 SHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLV 742
H + FL +VL + G+P+L ++ K+K ++++S G G+ E G+ V
Sbjct: 235 LTHFVTNSTYFLWDVLTTAYV-GSPNLVESTKLK-IDVVSQG--PSQGRTF-QSENGREV 289
Query: 743 KVLESLNVAVYYDHFAEV 760
+V+ +N ++ + ++
Sbjct: 290 QVITDVNKQAFFKYITDL 307
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 28/151 (18%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
+T+ G T+ A + + + KNIE + MGG GN+
Sbjct: 121 VTLLFTGPLTDLAKAINYDNSILKNIEKLVWMGGTFLDK----------------GNVEE 164
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQY 216
+ + AE+N F DP A VL S + V I+ L++T +P++ E RQ + +
Sbjct: 165 PEHDGTAEWNAFWDPEAVKVVLDSDMIVDIVALESTNQVPLT------MEVRQ-MWADKR 217
Query: 217 CFQSLKMIRDTWSGSPPF-----HEAYCMWD 242
+ + + +++ PP + Y +WD
Sbjct: 218 QYLGVDFLGTSYAAVPPLTHFVTNSTYFLWD 248
>gi|402812989|ref|ZP_10862584.1| putative nucleosidase [Paenibacillus alvei DSM 29]
gi|402508932|gb|EJW19452.1| putative nucleosidase [Paenibacillus alvei DSM 29]
Length = 339
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 21/99 (21%)
Query: 95 GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNL 154
G +T+ + TN AI L P L + ++ + VMGGA+++ GN+
Sbjct: 149 GELTLLMTAPLTNLAIALRACPELPQLVKRVVVMGGAVQT----------------FGNV 192
Query: 155 YPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
P AE+NI+ DP AA VLH+G +T++ LD T+
Sbjct: 193 -----TPVAEYNIYVDPEAAKMVLHAGFDLTLVGLDVTR 226
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 108/254 (42%), Gaps = 31/254 (12%)
Query: 408 PVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDI 467
PV+ D+D D LAL + K + ++L G+ + + S ++HM+ + D+
Sbjct: 13 PVIMDVDTGVDDALALALIWK--SKQVDLVGVTTVNGNVSLSQATLNTRKVMHMLQQLDV 70
Query: 468 P---VGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
G+ + +++ + PI IP G+ L T + A
Sbjct: 71 QNERSNAGEGNGIADLSIRNVPI--------IP-GANEPLMRSTFFEHA----------V 111
Query: 525 AENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS 584
N GA D PEL + L I E+ + ++T+L PLTNLA I L+
Sbjct: 112 HGNDGLGGALSDTSPPELEEGLLHAAQFIIEEAKKRPGELTLLMTAPLTNLA--IALRAC 169
Query: 585 SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHM 644
+ Q V V G GNV V AE+N+++DP AAK V + ++ L+ L +
Sbjct: 170 PELPQLVKRVVVMGGAVQTFGNVTPV-----AEYNIYVDPEAAKMVLHAGFDLTLVGLDV 224
Query: 645 QRRVASFFKILHKL 658
R+ + L KL
Sbjct: 225 TRQALLRPEHLEKL 238
>gi|418328241|ref|ZP_12939359.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis 14.1.R1.SE]
gi|365232201|gb|EHM73211.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis 14.1.R1.SE]
Length = 313
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 96/198 (48%), Gaps = 10/198 (5%)
Query: 563 KITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFL 622
K+T+L GPLT+LA+ I NS +++++ + G +KGNV AE+N F
Sbjct: 120 KVTLLFTGPLTDLAKAINYDNS--ILKNIEKLVWMGGTFLDKGNVEEPEHDGTAEWNAFW 177
Query: 623 DPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQ 682
DP A K V +S + + ++ L +V ++ D+++ F L +
Sbjct: 178 DPEAVKVVLDSDMIVDIVALESTNQVPLTMEVRQMWADKRQYLGVDF---LGTSYAAVPP 234
Query: 683 SHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLV 742
H + FL +VL + G+P+L ++ K+K ++++S G G+ E G+ V
Sbjct: 235 LTHFVTNSTYFLWDVLTTAYV-GSPNLVESTKLK-IDVVSQG--PSQGRTF-QSENGREV 289
Query: 743 KVLESLNVAVYYDHFAEV 760
+V+ +N ++ + ++
Sbjct: 290 QVITDVNKQAFFKYITDL 307
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 28/151 (18%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
+T+ G T+ A + + + KNIE + MGG GN+
Sbjct: 121 VTLLFTGPLTDLAKAINYDNSILKNIEKLVWMGGTFLDK----------------GNVEE 164
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQY 216
+ + AE+N F DP A VL S + V I+ L++T +P++ E RQ + +
Sbjct: 165 PEHDGTAEWNAFWDPEAVKVVLDSDMIVDIVALESTNQVPLT------MEVRQ-MWADKR 217
Query: 217 CFQSLKMIRDTWSGSPPF-----HEAYCMWD 242
+ + + +++ PP + Y +WD
Sbjct: 218 QYLGVDFLGTSYAAVPPLTHFVTNSTYFLWD 248
>gi|260428066|ref|ZP_05782045.1| pyrimidine-specific ribonucleoside hydrolase RihA [Citreicella sp.
SE45]
gi|260422558|gb|EEX15809.1| pyrimidine-specific ribonucleoside hydrolase RihA [Citreicella sp.
SE45]
Length = 312
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 77/178 (43%), Gaps = 29/178 (16%)
Query: 89 INAISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQC 148
+ A AG +T+ +G TN A P + ++ I +MGGA
Sbjct: 113 LRAEPAGTVTLCPLGPLTNIATAFERAPDIVSRVKRIVLMGGAYFE-------------- 158
Query: 149 DSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSE---NFFVEF 205
+GN+ P AEFNI+ DP AA V +G+P+ ++PLD T V++ + F
Sbjct: 159 --VGNI-----TPAAEFNIYVDPEAAALVFGAGVPLVVLPLDVTHKALVTKPRNDAFRAL 211
Query: 206 ERRQNTYEAQYC--FQSLKMIRDTWSGSP---PFHEAYCMWDSFMAGVALSIMLNSSS 258
R T A+ F+ + + G+P P AY + +G +++ + + S
Sbjct: 212 GNRAGTAVAEMTDFFERFDLAKYGSDGAPLHDPCVTAYLLRPDLFSGRYINVEIETVS 269
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 554 IVESI--EPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVP 611
I+E++ EP +T+ GPLTN+A + + ++ V + G E GN+
Sbjct: 109 IIETLRAEPAGTVTLCPLGPLTNIAT--AFERAPDIVSRVKRIVLMGGAYFEVGNI---- 162
Query: 612 SSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
+ AEFN+++DP AA VF + + + ++PL + +
Sbjct: 163 -TPAAEFNIYVDPEAAALVFGAGVPLVVLPLDVTHK 197
>gi|153002154|ref|YP_001367835.1| ribonucleoside hydrolase 1 [Shewanella baltica OS185]
gi|166226416|sp|A6WSI3.1|RIHA_SHEB8 RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|151366772|gb|ABS09772.1| Purine nucleosidase [Shewanella baltica OS185]
Length = 318
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 68/148 (45%), Gaps = 31/148 (20%)
Query: 51 PVGQRLYVNTNY----GLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGS 104
P+ + L + N GL LP+ ++P + TA +++ I S P+T+ G
Sbjct: 70 PLTRELIIADNVHGETGLDGPALPE--PSFSP-QAITAVELMAQQIRQSTQPVTLVPTGP 126
Query: 105 HTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAE 164
TN A+ L ++ L IE I +MGGA +GN P AE
Sbjct: 127 LTNIALLLASHSELHPKIERIVLMGGAA-----------------GVGNW-----TPAAE 164
Query: 165 FNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
FNIF DP AA V SGIP+T+ LD T
Sbjct: 165 FNIFVDPEAADIVFKSGIPITMCGLDVT 192
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 56/109 (51%), Gaps = 13/109 (11%)
Query: 552 KSIVESIEPGSKITILTNGPLTNLAQIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTV 610
+ I +S +P +T++ GPLTN+A ++ + I+ + ++GG G N
Sbjct: 110 QQIRQSTQP---VTLVPTGPLTNIALLLASHSELHPKIERIVLMGGAAGVGN-------- 158
Query: 611 PSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLR 659
+ AEFN+F+DP AA VF+S + I + L + + + + ++R
Sbjct: 159 -WTPAAEFNIFVDPEAADIVFKSGIPITMCGLDVTHQAQIMDEDIERIR 206
>gi|254254586|ref|ZP_04947903.1| Inosine-uridine nucleoside N-ribohydrolase [Burkholderia dolosa
AUO158]
gi|124899231|gb|EAY71074.1| Inosine-uridine nucleoside N-ribohydrolase [Burkholderia dolosa
AUO158]
Length = 350
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 59/136 (43%), Gaps = 24/136 (17%)
Query: 78 PLRQPTAQQVLINAIS-AGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
PL A L++ +S A P IT+ +G TN A L+ P ++ + I +MGGA
Sbjct: 136 PLAPGHAVSYLVDTLSRAAPNSITLCALGPLTNIATALIEAPQIRGGLREIVLMGGAF-- 193
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKT 194
F N + P AEFNI+ DP AA V SG+P+ ++P D
Sbjct: 194 --FERGNIT-----------------PAAEFNIYVDPQAADVVFGSGVPIVVLPRDVAVK 234
Query: 195 IPVSENFFVEFERRQN 210
P++ F N
Sbjct: 235 APITAARIAPFRALGN 250
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 9/81 (11%)
Query: 562 SKITILTNGPLTNLAQ-IIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNM 620
+ IT+ GPLTN+A +I ++++ ++GG E+GN+ + AEFN+
Sbjct: 156 NSITLCALGPLTNIATALIEAPQIRGGLREIVLMGGAF---FERGNI-----TPAAEFNI 207
Query: 621 FLDPLAAKAVFESKLEIKLIP 641
++DP AA VF S + I ++P
Sbjct: 208 YVDPQAADVVFGSGVPIVVLP 228
>gi|420212843|ref|ZP_14718188.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIHLM001]
gi|394278427|gb|EJE22743.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIHLM001]
Length = 313
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 98/198 (49%), Gaps = 10/198 (5%)
Query: 563 KITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFL 622
K+T+L GPLT+LA+ L+ +S+++++ + G +KGNV AE+N F
Sbjct: 120 KVTLLFTGPLTDLAK--ALKYDNSILKNIEKLVWMGGTFLDKGNVEEPEHDGTAEWNAFW 177
Query: 623 DPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQ 682
DP A K V +S + + ++ L +V ++ D+++ F L +
Sbjct: 178 DPEAVKVVLDSDMNVDIVALESTNQVPLTMEVRQMWADKRQYLGVDF---LGTSYAAVPP 234
Query: 683 SHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLV 742
H + FL +VL + G+P+L ++ K+K ++++S G G+ E G+ V
Sbjct: 235 LTHFVTNSTYFLWDVLTTAYV-GSPNLVESTKLK-IDVVSQG--PSQGRTF-QSEYGREV 289
Query: 743 KVLESLNVAVYYDHFAEV 760
+V+ +N ++++ ++
Sbjct: 290 QVITDVNKQAFFNYITDL 307
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 64/151 (42%), Gaps = 28/151 (18%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
+T+ G T+ A L + + KNIE + MGG GN+
Sbjct: 121 VTLLFTGPLTDLAKALKYDNSILKNIEKLVWMGGTFLDK----------------GNVEE 164
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQY 216
+ + AE+N F DP A VL S + V I+ L++T +P++ E RQ + +
Sbjct: 165 PEHDGTAEWNAFWDPEAVKVVLDSDMNVDIVALESTNQVPLT------MEVRQ-MWADKR 217
Query: 217 CFQSLKMIRDTWSGSPPF-----HEAYCMWD 242
+ + + +++ PP + Y +WD
Sbjct: 218 QYLGVDFLGTSYAAVPPLTHFVTNSTYFLWD 248
>gi|170737370|ref|YP_001778630.1| inosine/uridine-preferring nucleoside hydrolase [Burkholderia
cenocepacia MC0-3]
gi|169819558|gb|ACA94140.1| Inosine/uridine-preferring nucleoside hydrolase [Burkholderia
cenocepacia MC0-3]
Length = 350
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 60/137 (43%), Gaps = 24/137 (17%)
Query: 77 APLRQPTAQQVLINAIS-AGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIR 133
APL A L++ +S A P +T+ +G TN A L+ P ++ + I +MGGA
Sbjct: 135 APLAADHAVSYLVDTLSRAAPNSVTLCALGPLTNIATALVEAPQIRGALREIVLMGGAF- 193
Query: 134 SDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
F N + P AEFNI+ DP AA V SG+P+ ++P D
Sbjct: 194 ---FERGNIT-----------------PAAEFNIYVDPQAADVVFGSGVPIVVLPRDVAV 233
Query: 194 TIPVSENFFVEFERRQN 210
P++ F N
Sbjct: 234 KAPITPARVAPFRALGN 250
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 57/103 (55%), Gaps = 12/103 (11%)
Query: 543 RQPLAVDVWKS-IVESIEPGS--KITILTNGPLTNLAQ-IIGLQNSSSVIQDVYIVGGNK 598
R PLA D S +V+++ + +T+ GPLTN+A ++ ++++ ++GG
Sbjct: 134 RAPLAADHAVSYLVDTLSRAAPNSVTLCALGPLTNIATALVEAPQIRGALREIVLMGG-- 191
Query: 599 GQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
E+GN+ + AEFN+++DP AA VF S + I ++P
Sbjct: 192 -AFFERGNI-----TPAAEFNIYVDPQAADVVFGSGVPIVVLP 228
>gi|359793271|ref|ZP_09296032.1| ribosylpyrimidine nucleosidase, partial [Mesorhizobium alhagi
CCNWXJ12-2]
gi|359250530|gb|EHK54014.1| ribosylpyrimidine nucleosidase, partial [Mesorhizobium alhagi
CCNWXJ12-2]
Length = 208
Score = 57.8 bits (138), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/171 (26%), Positives = 70/171 (40%), Gaps = 29/171 (16%)
Query: 95 GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNL 154
G IT+ + TN AI L+ P + I I M GA F N +
Sbjct: 14 GAITICSLSPFTNLAIALVQAPDIAPRISEIVAMAGAY----FEGGNIT----------- 58
Query: 155 YPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQN---- 210
P AEFN++ DP AA VL SGIP+ ++PLD T + + N
Sbjct: 59 ------PTAEFNVYVDPEAARIVLESGIPIALLPLDVTHKMLSTPARLAAMRALGNRCGI 112
Query: 211 -TYEAQYCFQSLKMIRDTWSGSP---PFHEAYCMWDSFMAGVALSIMLNSS 257
T E +S + + W G+P P A+ + +G +++ + +S
Sbjct: 113 ATAEMLEFSESFDLDKYGWEGAPLHGPCVPAFMLAPEIFSGRLVNVSVETS 163
Score = 49.7 bits (117), Expect = 0.007, Method: Composition-based stats.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 11/100 (11%)
Query: 554 IVESI---EPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTV 610
IV S+ EPG+ ITI + P TNLA I L + + + + G E GN+
Sbjct: 4 IVRSLREAEPGA-ITICSLSPFTNLA--IALVQAPDIAPRISEIVAMAGAYFEGGNI--- 57
Query: 611 PSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVAS 650
+ AEFN+++DP AA+ V ES + I L+PL + ++ S
Sbjct: 58 --TPTAEFNVYVDPEAARIVLESGIPIALLPLDVTHKMLS 95
>gi|404399928|ref|ZP_10991512.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
fuscovaginae UPB0736]
Length = 350
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 9/134 (6%)
Query: 118 LKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTV 177
L + +E I +MGG + + D++G + P +N AE+NIF DP A V
Sbjct: 156 LHEKVERIVMMGGNLLPQYVKPGAGGNIK--DALGPM-PYYTNDVAEWNIFLDPLGAQLV 212
Query: 178 LHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPFHEA 237
SGIPV ++ L+A+ +IP+++ F ++ + N Q LK + + + +P +
Sbjct: 213 FGSGIPVQLVALNASNSIPITQGFVLKLSQIGNP-----VAQFLKQVLGSSTIAPGIDKY 267
Query: 238 YCMWDSFMAGVALS 251
WD +A VA++
Sbjct: 268 LYFWDP-LAAVAIT 280
>gi|392939204|ref|ZP_10304848.1| Inosine-uridine nucleoside N-ribohydrolase [Thermoanaerobacter
siderophilus SR4]
gi|392290954|gb|EIV99397.1| Inosine-uridine nucleoside N-ribohydrolase [Thermoanaerobacter
siderophilus SR4]
Length = 308
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 48/96 (50%), Gaps = 22/96 (22%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
IT+ G TN A L++NP +K IE I +MGG++ IG +
Sbjct: 118 ITIIPTGPLTNIATVLLSNPEIKAKIERIVLMGGSM------------------IGGNW- 158
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
P AEFNI DP AA V +SG+P+T+ LD T
Sbjct: 159 ---TPAAEFNILVDPEAASIVFNSGVPITMCGLDVT 191
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 17/130 (13%)
Query: 538 DDPELRQPLAVDVWKSIVESI-----EPGSKITILTNGPLTNLAQIIGLQNSS--SVIQD 590
D PEL P K+ VE+I E KITI+ GPLTN+A ++ L N + I+
Sbjct: 87 DGPELPPPNFKPSSKNAVETIMEVINESNEKITIIPTGPLTNIATVL-LSNPEIKAKIER 145
Query: 591 VYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVAS 650
+ ++GG+ N + AEFN+ +DP AA VF S + I + L + +
Sbjct: 146 IVLMGGSMIGGN---------WTPAAEFNILVDPEAASIVFNSGVPITMCGLDVTHKAQI 196
Query: 651 FFKILHKLRD 660
+ + + ++R+
Sbjct: 197 YKEEVEEIRN 206
>gi|310790776|gb|EFQ26309.1| inosine-uridine preferring nucleoside hydrolase [Glomerella
graminicola M1.001]
Length = 394
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 83/216 (38%), Gaps = 26/216 (12%)
Query: 84 AQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSS 143
A + A AG + GS TN A+ +P L +I+ + +MGGAI D F
Sbjct: 119 AMAAALKAQPAGVAWLVATGSLTNVALLFQKHPELVAHIKGLSIMGGAI-GDGFTDIVLG 177
Query: 144 QSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHS---GIPVTIIPLDATKTIPV--- 197
+ IGN P+AEFNI DP AA +V + T++PLD + +
Sbjct: 178 VVDGVPRIGNW-----TPWAEFNIIIDPEAAASVFSNKALAAKTTLVPLDLSHQVLATQE 232
Query: 198 -------SENFFVEFERRQNTYEAQYCFQSLKMIRDTWSG------SPPFHEAYCMWDSF 244
S++ E + T Q + L T+S PP H+ + +
Sbjct: 233 VRDLLLYSKDGAAEKTGKGKTTLRQMLVELLMFFAKTYSDVFGITTGPPLHDPLAV-AAV 291
Query: 245 MAGVALSIMLNSSSHNGENACSEMEYMNLTVVTSNE 280
+ G I + N E LTVVT +
Sbjct: 292 LTGTKHEIPFHDYDAKKGNCVKYHERFELTVVTEGD 327
>gi|409074493|gb|EKM74890.1| hypothetical protein AGABI1DRAFT_123493 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 346
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 79/182 (43%), Gaps = 30/182 (16%)
Query: 537 NDDPELRQPLAVDVWKSIVESIE-------------PGSKITILTNGPLTNLAQIIGLQN 583
N+DP + + VD V ++E G K+T++T GP+TN+A +
Sbjct: 79 NEDPSILKRFVVDECGEQVRALEGMIKEIKRCWKNGKGEKVTLVTTGPMTNVALFVSCYE 138
Query: 584 ----SSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKL 639
++++ +GG G N S AE+N+ DP A + V + +++ +
Sbjct: 139 DFVAEGGAVEEIVFMGGGVGLGNR---------SAVAEYNILTDPHATQIVLDCPVKVTM 189
Query: 640 IPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLG 699
IP+++ + +I ++L P SV +Q L L+ H+ + + TF
Sbjct: 190 IPINVTHTAIATHEIQYRLLTNSTAP-SVLAQELPPAKTRLR---HTLNTIITFFASTYK 245
Query: 700 AV 701
+V
Sbjct: 246 SV 247
>gi|386325981|ref|YP_006022098.1| Pyrimidine-specific ribonucleoside hydrolase rihA [Shewanella
baltica BA175]
gi|333820126|gb|AEG12792.1| Pyrimidine-specific ribonucleoside hydrolase rihA [Shewanella
baltica BA175]
Length = 318
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 47/100 (47%), Gaps = 22/100 (22%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
S P+T+ G TN A+ L ++ L IE I +MGGA +G
Sbjct: 115 STQPVTLVPTGPLTNIALLLASHSELHPKIERIVLMGGAA-----------------GVG 157
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
N P AEFNIF DP AA V SGIP+T+ LD T
Sbjct: 158 NW-----TPAAEFNIFVDPEAADIVFKSGIPITMCGLDVT 192
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 105/260 (40%), Gaps = 59/260 (22%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M + ++ D D D +ALI L P +L+ L + S+ T++ +L ++ R
Sbjct: 1 MTRHIILDCDPGHDDAIALILALAHP-DLVPL-AVTTSAGNQTPDKTLNNALRILTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA----RDLPRSP 520
DIPV GG PL + + +D ++G LP
Sbjct: 59 GDIPVA-----------------GGATK----PL-TRELIIADNVHGETGLDGPALPEPS 96
Query: 521 RRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIG 580
A +V A Q I +S +P +T++ GPLTN+A ++
Sbjct: 97 FNPQAITAVELMAQQ------------------IRQSTQP---VTLVPTGPLTNIALLLA 135
Query: 581 LQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKL 639
+ I+ + ++GG G N + AEFN+F+DP AA VF+S + I +
Sbjct: 136 SHSELHPKIERIVLMGGAAGVGN---------WTPAAEFNIFVDPEAADIVFKSGIPITM 186
Query: 640 IPLHMQRRVASFFKILHKLR 659
L + + + + ++R
Sbjct: 187 CGLDVTHQAQIMDEDIERIR 206
>gi|212558033|gb|ACJ30487.1| Inosine/uridine-preferring nucleoside hydrolase [Shewanella
piezotolerans WP3]
Length = 324
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 67/145 (46%), Gaps = 22/145 (15%)
Query: 51 PVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNF 108
PVG + V+ G +P A R A Q +I+A++A P IT+ +G TN
Sbjct: 74 PVGPTVAVHGESGFGDVQVPADVAGEADSR--PAYQYIIDAVTAEPNEITLVAIGPLTNL 131
Query: 109 AIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIF 168
A+ L P++ ++ + +MGGA + D GN+ PYAE NI
Sbjct: 132 ALALKAEPNIVNLVKEVVIMGGAFGVN-------------DHRGNV-----TPYAEANIH 173
Query: 169 SDPFAAYTVLHSGIPVTIIPLDATK 193
DP AA V + PV II LD T+
Sbjct: 174 DDPHAADIVFGAAWPVVIIGLDVTE 198
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 113/262 (43%), Gaps = 56/262 (21%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M K ++ D D D +A+++ P I LK I +T + A ++ L++ +
Sbjct: 1 MTKKIILDTDPGIDDVMAILFAEAHP--DIELKAI---TTIYGNVAIAGATHNALYLKQK 55
Query: 465 DDIPVGLGDVFAVGEVNPKF-PPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRY 523
G G A G P PP+G G GF D +A + P
Sbjct: 56 ----YGFGADVAEGASKPIVRPPVGPTVAVH----GESGFGDVQVPADVAGEADSRP--- 104
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESI--EPGSKITILTNGPLTNLAQIIGL 581
++ I++++ EP ++IT++ GPLTNLA +
Sbjct: 105 --------------------------AYQYIIDAVTAEP-NEITLVAIGPLTNLALALKA 137
Query: 582 Q-NSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLI 640
+ N +++++V I+GG G ++ +GNV + YAE N+ DP AA VF + + +I
Sbjct: 138 EPNIVNLVKEVVIMGGAFGVNDHRGNV-----TPYAEANIHDDPHAADIVFGAAWPVVII 192
Query: 641 PLHMQRRVASFFKI--LHKLRD 660
L + + SFF L +LRD
Sbjct: 193 GLDVTEQ--SFFTADYLDQLRD 212
>gi|84516380|ref|ZP_01003740.1| inosine-uridine preferring nucleoside hydrolase [Loktanella
vestfoldensis SKA53]
gi|84510076|gb|EAQ06533.1| inosine-uridine preferring nucleoside hydrolase [Loktanella
vestfoldensis SKA53]
Length = 312
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 82/201 (40%), Gaps = 32/201 (15%)
Query: 70 PQGGRKYAPLRQPTAQQVLINAIS---AGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIY 126
PQ PL+ A +I + +G +T+ +G TN A P + + I
Sbjct: 91 PQMADPTMPLQDQHAVDFIIQTLREEPSGTVTLVPVGPLTNIATAFQRAPDIIARVREIV 150
Query: 127 VMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTI 186
+MGGA + +GN+ P AEFNI+ DP AA V +G+P+ +
Sbjct: 151 LMGGAYFA----------------VGNI-----TPAAEFNIYVDPEAAKIVFAAGVPLVV 189
Query: 187 IPLDATK---TIPVSENFFVEFERRQNTYEAQYC--FQSLKMIRDTWSGSP---PFHEAY 238
+PLD T T + F R A + F+ M + G+P P AY
Sbjct: 190 MPLDVTHKALTTRARIDAFRAMGTRVGDMVAAWTDFFERFDMAKYGSEGAPLHDPCTVAY 249
Query: 239 CMWDSFMAGVALSIMLNSSSH 259
+ S +G +++ + + S
Sbjct: 250 LIDPSLFSGRLINVEIETGSE 270
Score = 46.6 bits (109), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 559 EPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEF 618
EP +T++ GPLTN+A Q + +I V + G GN+ + AEF
Sbjct: 116 EPSGTVTLVPVGPLTNIAT--AFQRAPDIIARVREIVLMGGAYFAVGNI-----TPAAEF 168
Query: 619 NMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
N+++DP AAK VF + + + ++PL + +
Sbjct: 169 NIYVDPEAAKIVFAAGVPLVVMPLDVTHK 197
>gi|429196109|ref|ZP_19188095.1| inosine-uridine preferring nucleoside hydrolase [Streptomyces
ipomoeae 91-03]
gi|428668187|gb|EKX67224.1| inosine-uridine preferring nucleoside hydrolase [Streptomyces
ipomoeae 91-03]
Length = 330
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 53/118 (44%), Gaps = 23/118 (19%)
Query: 77 APLRQPTAQQVLINAISA--GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
AP ++ Q L+ A G +TV G TN AI L+ +P + M GA R
Sbjct: 101 APHPTESSAQALLRLSRAYEGELTVCATGPLTNVAIALLEDPAFAHRVGKFVFMSGAAR- 159
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
P + P AEFNI++DP AA VL SGIP T++ LDA+
Sbjct: 160 --------------------VPGNFTPVAEFNIWADPDAAEVVLSSGIPFTMVDLDAS 197
>gi|217974733|ref|YP_002359484.1| ribonucleoside hydrolase 1 [Shewanella baltica OS223]
gi|217499868|gb|ACK48061.1| Purine nucleosidase [Shewanella baltica OS223]
Length = 318
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 47/100 (47%), Gaps = 22/100 (22%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
S P+T+ G TN A+ L ++ L IE I +MGGA +G
Sbjct: 115 STQPVTLVPTGPLTNIALLLASHSELHPKIERIVLMGGAA-----------------GVG 157
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
N P AEFNIF DP AA V SGIP+T+ LD T
Sbjct: 158 NW-----TPAAEFNIFVDPEAADIVFKSGIPITMCGLDVT 192
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 56/109 (51%), Gaps = 13/109 (11%)
Query: 552 KSIVESIEPGSKITILTNGPLTNLAQIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTV 610
+ I +S +P +T++ GPLTN+A ++ + I+ + ++GG G N
Sbjct: 110 QQIRQSTQP---VTLVPTGPLTNIALLLASHSELHPKIERIVLMGGAAGVGN-------- 158
Query: 611 PSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLR 659
+ AEFN+F+DP AA VF+S + I + L + + + + ++R
Sbjct: 159 -WTPAAEFNIFVDPEAADIVFKSGIPITMCGLDVTHQAQIMDEDIERIR 206
>gi|251790208|ref|YP_003004929.1| Inosine/uridine-preferring nucleoside hydrolase [Dickeya zeae
Ech1591]
gi|247538829|gb|ACT07450.1| Inosine/uridine-preferring nucleoside hydrolase [Dickeya zeae
Ech1591]
Length = 322
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 79/195 (40%), Gaps = 57/195 (29%)
Query: 1 MMNRDDIPVGVGGEGGIL-PNGTILPDVGGYQPI--IDQGMSTAGECRYRQAIPVGQRLY 57
+ RDD+PV G E ++ P G Y I + AGECR V Q
Sbjct: 56 LSGRDDVPVFAGAEKPLIGPQ-----RYGKYAHIGAFSDELVPAGECR------VAQEHA 104
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPH 117
V+ F+ + R+ A PIT +G TN A+ L+ +P
Sbjct: 105 VD--------FIVRTTRRAAQ--------------ECNPITFCAIGPMTNLALALIQHPD 142
Query: 118 LKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTV 177
+ + I + M A ++G+ P+AEFN+++DP AA V
Sbjct: 143 VARGIRQVVTMSCAF----------------TALGH-----RTPWAEFNVYADPHAAGRV 181
Query: 178 LHSGIPVTIIPLDAT 192
SGIP+ ++PLD T
Sbjct: 182 FGSGIPLVVMPLDMT 196
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 102/243 (41%), Gaps = 50/243 (20%)
Query: 404 LMGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMG 463
+M + ++ D D D +AL L P + + GI V + + T+ ++ + G
Sbjct: 1 MMRQRIIIDTDPGVDDAIALWLALASP--QLEVLGITVVAGNVDLTHTLANARRIVALSG 58
Query: 464 RDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRY 523
RDD+PV FA E P IG +Y K +G+ SD L +P R
Sbjct: 59 RDDVPV-----FAGAEK----PLIGPQRYGKYAHIGAF----SDEL------VPAGECRV 99
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
E++V F + ++ + + + IT GP+TNLA
Sbjct: 100 AQEHAVDF------------------IVRTTRRAAQECNPITFCAIGPMTNLAL------ 135
Query: 584 SSSVIQDVYIVGGNKGQDNEKGNVFTVPSSK--YAEFNMFLDPLAAKAVFESKLEIKLIP 641
++IQ + G + Q FT + +AEFN++ DP AA VF S + + ++P
Sbjct: 136 --ALIQHPDVARGIR-QVVTMSCAFTALGHRTPWAEFNVYADPHAAGRVFGSGIPLVVMP 192
Query: 642 LHM 644
L M
Sbjct: 193 LDM 195
>gi|107025462|ref|YP_622973.1| twin-arginine translocation pathway signal [Burkholderia
cenocepacia AU 1054]
gi|116693356|ref|YP_838889.1| inosine/uridine-preferring nucleoside hydrolase [Burkholderia
cenocepacia HI2424]
gi|105894836|gb|ABF78000.1| Twin-arginine translocation pathway signal [Burkholderia
cenocepacia AU 1054]
gi|116651356|gb|ABK11996.1| Inosine/uridine-preferring nucleoside hydrolase [Burkholderia
cenocepacia HI2424]
Length = 350
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 24/133 (18%)
Query: 77 APLRQPTAQQVLINAIS-AGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIR 133
APL A L++ +S A P +T+ +G TN A L+ P ++ + I +MGGA
Sbjct: 135 APLAAGHAVSYLVDTLSRAAPNSVTLCALGPLTNIATALVEAPQIRAALREIVLMGGAF- 193
Query: 134 SDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
F N + P AEFN++ DP AA V SG+P+ ++P D
Sbjct: 194 ---FERGNIT-----------------PAAEFNVYVDPQAAEVVFGSGVPIVVLPRDVAV 233
Query: 194 TIPVSENFFVEFE 206
P++ F
Sbjct: 234 KAPITPARVAPFR 246
Score = 42.7 bits (99), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 48/81 (59%), Gaps = 9/81 (11%)
Query: 562 SKITILTNGPLTNLAQ-IIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNM 620
+ +T+ GPLTN+A ++ + ++++ ++GG E+GN+ + AEFN+
Sbjct: 156 NSVTLCALGPLTNIATALVEAPQIRAALREIVLMGG---AFFERGNI-----TPAAEFNV 207
Query: 621 FLDPLAAKAVFESKLEIKLIP 641
++DP AA+ VF S + I ++P
Sbjct: 208 YVDPQAAEVVFGSGVPIVVLP 228
>gi|70725770|ref|YP_252684.1| hypothetical protein SH0769 [Staphylococcus haemolyticus JCSC1435]
gi|68446494|dbj|BAE04078.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 315
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 103/213 (48%), Gaps = 15/213 (7%)
Query: 549 DVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNV 607
D+ + + +S EP +T+L GPLT+LA+ + ++ S + I+ + +GG EKGNV
Sbjct: 109 DIIRVLNQSNEP---VTLLFTGPLTDLAKALKIEPSIQNNIEKLVWMGGTFL---EKGNV 162
Query: 608 FTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPES 667
AE+N F DP A K VF+S++ I ++ L +V I D+++ P
Sbjct: 163 EEPEHDGTAEWNAFWDPEAVKTVFDSEVAIDMVALESTNQVPLTLDIRQMWADQRQYPGV 222
Query: 668 VFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKSLEIISDGDIS 727
F L T+ H + FL +VL + G P L Q YK ++++ G
Sbjct: 223 DF---LGVSYATVPPLTHFITNSTYFLWDVLTTAYI-GKPDLVQ-YKSLNVDVKFKG--P 275
Query: 728 KVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEV 760
G+ + +E G+ +KV+ + ++++ +
Sbjct: 276 SQGRTFI-KESGRPIKVVTDVKHDDFFNYITNL 307
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 28/155 (18%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
S P+T+ G T+ A L P ++ NIE + MGG G
Sbjct: 117 SNEPVTLLFTGPLTDLAKALKIEPSIQNNIEKLVWMGGTFLEK----------------G 160
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTY 212
N+ + + AE+N F DP A TV S + + ++ L++T +P++ + RQ +
Sbjct: 161 NVEEPEHDGTAEWNAFWDPEAVKTVFDSEVAIDMVALESTNQVPLT------LDIRQ-MW 213
Query: 213 EAQYCFQSLKMIRDTWSGSPPF-----HEAYCMWD 242
Q + + + +++ PP + Y +WD
Sbjct: 214 ADQRQYPGVDFLGVSYATVPPLTHFITNSTYFLWD 248
>gi|350571693|ref|ZP_08940011.1| cytidine/uridine-specific hydrolase [Neisseria wadsworthii 9715]
gi|349791273|gb|EGZ45160.1| cytidine/uridine-specific hydrolase [Neisseria wadsworthii 9715]
Length = 319
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 55/119 (46%), Gaps = 24/119 (20%)
Query: 77 APLRQPTAQQVLINAISAG---PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIR 133
PL++ A LI+ + A I + +G TN A L P + I+ I +MGG
Sbjct: 104 CPLQEQHAVNYLIDTLRAAEDNSIVICPIGPLTNIAQVLTLAPDCARAIKRIVLMGG--- 160
Query: 134 SDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
+ F + N + P AEFN + DP AA VL SG+P TI+PLD T
Sbjct: 161 -NYFEAGNIT-----------------PAAEFNFYCDPHAAQIVLQSGVPTTILPLDVT 201
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 10/121 (8%)
Query: 542 LRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQ 600
L++ AV+ + + E S I I GPLTN+AQ++ L + + I+ + ++GGN
Sbjct: 106 LQEQHAVNYLIDTLRAAEDNS-IVICPIGPLTNIAQVLTLAPDCARAIKRIVLMGGNY-- 162
Query: 601 DNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRD 660
E GN+ + AEFN + DP AA+ V +S + ++PL + + + LR
Sbjct: 163 -FEAGNI-----TPAAEFNFYCDPHAAQIVLQSGVPTTILPLDVTHKACITTPRMDVLRQ 216
Query: 661 R 661
+
Sbjct: 217 Q 217
>gi|116248849|ref|YP_764690.1| nucleoside hydrolase [Rhizobium leguminosarum bv. viciae 3841]
gi|115253499|emb|CAK11891.1| putative nucleoside hydrolase [Rhizobium leguminosarum bv. viciae
3841]
Length = 332
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 27/152 (17%)
Query: 44 CRYRQAIPVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAIS---AGPITVF 100
C P+ +V+ G+ A LP+ P+++ +I+ + AG +TV
Sbjct: 67 CDRPMTGPLVTAEHVHGATGMDGADLPE---PSMPMQEQHGVDFIIDTLQSEPAGAVTVC 123
Query: 101 VMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSN 160
+G TN L P + I+ + +MGG + F N +
Sbjct: 124 TLGPLTNLGKALTRAPEIAGRIKQLVLMGGGL----FEGGNIT----------------- 162
Query: 161 PYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
P AEFNI+ DP AA V SG+P+ ++PLD T
Sbjct: 163 PAAEFNIYVDPPAAAVVFGSGVPIVMMPLDVT 194
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 14/138 (10%)
Query: 515 DLPRSPRRYTAENSVRFGASQDNDDPELRQPL----AVDVWKSIVESIEPGSKITILTNG 570
D P + TAE+ D PE P+ VD ++S EP +T+ T G
Sbjct: 68 DRPMTGPLVTAEHVHGATGMDGADLPEPSMPMQEQHGVDFIIDTLQS-EPAGAVTVCTLG 126
Query: 571 PLTNLAQIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKA 629
PLTNL + + + I+ + ++GG E GN+ + AEFN+++DP AA
Sbjct: 127 PLTNLGKALTRAPEIAGRIKQLVLMGGGL---FEGGNI-----TPAAEFNIYVDPPAAAV 178
Query: 630 VFESKLEIKLIPLHMQRR 647
VF S + I ++PL + +
Sbjct: 179 VFGSGVPIVMMPLDVTHK 196
>gi|398809294|ref|ZP_10568145.1| Inosine-uridine nucleoside N-ribohydrolase [Variovorax sp. CF313]
gi|398086073|gb|EJL76710.1| Inosine-uridine nucleoside N-ribohydrolase [Variovorax sp. CF313]
Length = 396
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 23/154 (14%)
Query: 70 PQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYV 127
P G ++ +++ +A +++ + A P IT+ +G TN A+ NP + I+ I
Sbjct: 160 PDGFAQHTVVQRKSAVDFIVDTVKANPGQITILAIGPLTNIALAAKQNPEIVPLIKKIIY 219
Query: 128 MGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTII 187
MGGAI D GN + AEFN + DP AA V+ IP ++
Sbjct: 220 MGGAI----------------DVAGN-----TTKAAEFNWWFDPDAAQYVVRLPIPQVVV 258
Query: 188 PLDATKTIPVSENFFVEFERRQNTYEAQYCFQSL 221
PLD T T+ +++ + FQ L
Sbjct: 259 PLDVTDTVFLTKTIYDRIAHPAKPTAVTDVFQKL 292
>gi|421141811|ref|ZP_15601791.1| Inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
fluorescens BBc6R8]
gi|404507104|gb|EKA21094.1| Inosine/uridine-preferring nucleoside hydrolase [Pseudomonas
fluorescens BBc6R8]
Length = 360
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 23/135 (17%)
Query: 70 PQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYV 127
P G + LR+ TA Q +++++ A P +T+ +G TN A+ + + P + I+ I
Sbjct: 136 PDGLATHTRLRKETAAQFIVDSVRANPHEVTILAVGPLTNIALAIRSAPDIVPLIKRIVY 195
Query: 128 MGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTII 187
MGGA+ P ++ P AEFN + DP AA VL S I I
Sbjct: 196 MGGALE---------------------IPGNTTPAAEFNWWFDPEAAKIVLRSPIEHVIF 234
Query: 188 PLDATKTIPVSENFF 202
P D + + ++ +
Sbjct: 235 PNDVCEKVTFDKSVY 249
Score = 42.7 bits (99), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 9/135 (6%)
Query: 554 IVESIEPG-SKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPS 612
IV+S+ ++TIL GPLTN+A + ++++ ++ + + G GN T P+
Sbjct: 154 IVDSVRANPHEVTILAVGPLTNIA--LAIRSAPDIVPLIKRIVYMGGALEIPGN--TTPA 209
Query: 613 SKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQR 672
AEFN + DP AAK V S +E + P + +V +F K +++ K P + +
Sbjct: 210 ---AEFNWWFDPEAAKIVLRSPIEHVIFPNDVCEKV-TFDKSVYERVIAHKGPIADLYKH 265
Query: 673 LLQGLMTLQQSHHSY 687
L ++HS+
Sbjct: 266 EFGPLFDKDPAYHSF 280
>gi|452975697|gb|EME75515.1| inosine-uridine preferring nucleoside hydrolase [Bacillus
sonorensis L12]
Length = 316
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 18/202 (8%)
Query: 564 ITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLD 623
+T+L GPLT+LA+ + S+ + + + G EKGNV AE+N F D
Sbjct: 121 VTLLFTGPLTDLAR--AFEADPSIEKHIEKLVWMGGTFLEKGNVEEPEHDGTAEWNAFWD 178
Query: 624 PLAAKAVFESKLEIKLIPLHMQRRVASFFKI-LHKLRDRKKTPESVFSQ-RLLQGLMTLQ 681
P + KAVFE +EI ++ L +V + LH R RK Q L +
Sbjct: 179 PYSVKAVFEHDIEIDMVALESTNQVPLTNDVRLHWARLRKHVGIDFIGQCYALCPPLVHT 238
Query: 682 QSHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKSLEIISDGDISKVGQIIVNQEQ--G 739
+++ +Y +L +VL + LG + + +S+ I + + G +E G
Sbjct: 239 ETNSTY-----YLWDVLTTLTLGK----KEMIRSRSVNTIVHTESPRQG---TTEEHPGG 286
Query: 740 KLVKVLESLNVAVYYDHFAEVL 761
+ VKV+E ++ ++ +F E++
Sbjct: 287 RPVKVVEQVDREAFFAYFEELM 308
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 93/241 (38%), Gaps = 38/241 (15%)
Query: 15 GGILPNGTIL-PDVGGYQPIIDQGMS-----TAGECRYRQAIPVGQRLYVNTNYGLRKAF 68
++P L P + + IID+ S A + R P R++ L
Sbjct: 33 ASVIPADCYLEPALSASRKIIDRFGSYRVETAASDSRGVNPFPKEWRMHAFYVDAL--PI 90
Query: 69 LPQGGRKYAPLRQPTAQQVLINAIS--AGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIY 126
L + G AP+ A LI A+ P+T+ G T+ A +P ++K+IE +
Sbjct: 91 LNEKGAVEAPVSDLPAHLHLIEALKNIEEPVTLLFTGPLTDLARAFEADPSIEKHIEKLV 150
Query: 127 VMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTI 186
MGG GN+ + + AE+N F DP++ V I + +
Sbjct: 151 WMGGTFLEK----------------GNVEEPEHDGTAEWNAFWDPYSVKAVFEHDIEIDM 194
Query: 187 IPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPF-----HEAYCMW 241
+ L++T +P++ + + + R + + Q + PP + Y +W
Sbjct: 195 VALESTNQVPLTNDVRLHWARLRKHVGIDFIGQCYAL-------CPPLVHTETNSTYYLW 247
Query: 242 D 242
D
Sbjct: 248 D 248
>gi|395797478|ref|ZP_10476767.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas sp.
Ag1]
gi|395338224|gb|EJF70076.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas sp.
Ag1]
Length = 360
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 23/135 (17%)
Query: 70 PQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYV 127
P G + LR+ TA Q +++++ A P +T+ +G TN A+ + + P + I+ I
Sbjct: 136 PDGLATHTRLRKETAAQFIVDSVRANPHEVTILAVGPLTNIALAIRSAPDIVPLIKRIVY 195
Query: 128 MGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTII 187
MGGA+ P ++ P AEFN + DP AA VL S I I
Sbjct: 196 MGGALE---------------------IPGNTTPAAEFNWWFDPEAAKIVLRSPIEHVIF 234
Query: 188 PLDATKTIPVSENFF 202
P D + + ++ +
Sbjct: 235 PNDVCEKVTFDKSVY 249
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 9/135 (6%)
Query: 554 IVESIEPG-SKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPS 612
IV+S+ ++TIL GPLTN+A + ++++ ++ + + G GN T P+
Sbjct: 154 IVDSVRANPHEVTILAVGPLTNIA--LAIRSAPDIVPLIKRIVYMGGALEIPGN--TTPA 209
Query: 613 SKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQR 672
AEFN + DP AAK V S +E + P + +V +F K +++ K P + +
Sbjct: 210 ---AEFNWWFDPEAAKIVLRSPIEHVIFPNDVCEKV-TFDKSVYERVIAHKGPIADLYKH 265
Query: 673 LLQGLMTLQQSHHSY 687
L ++HS+
Sbjct: 266 EFGPLFAKDPAYHSF 280
>gi|440798045|gb|ELR19118.1| inosineuridine preferring nucleoside hydrolase [Acanthamoeba
castellanii str. Neff]
Length = 377
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 21/113 (18%)
Query: 88 LINAISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQ 147
L+ G IT+ +G TN A+ + + + I +MGGA
Sbjct: 157 LLRTHEPGEITILTIGPLTNIALAAEADIETLRRVHEIVIMGGAF--------------- 201
Query: 148 CDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSEN 200
P + P+AE+NI++DP AA V + +P+ +PLDAT +P +E
Sbjct: 202 ------FAPGNVTPHAEYNIYADPEAAKVVCEARLPLVFVPLDATHLVPFAEE 248
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 58/99 (58%), Gaps = 9/99 (9%)
Query: 544 QPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNE 603
QP AVDV ++ + EPG +ITILT GPLTN+A + + ++ V+ + G
Sbjct: 148 QP-AVDVLLDLLRTHEPG-EITILTIGPLTNIA--LAAEADIETLRRVHEIVIMGGAFFA 203
Query: 604 KGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
GNV + +AE+N++ DP AAK V E++L + +PL
Sbjct: 204 PGNV-----TPHAEYNIYADPEAAKVVCEARLPLVFVPL 237
>gi|331700957|ref|YP_004397916.1| ribosylpyrimidine nucleosidase [Lactobacillus buchneri NRRL
B-30929]
gi|329128300|gb|AEB72853.1| Ribosylpyrimidine nucleosidase [Lactobacillus buchneri NRRL
B-30929]
Length = 304
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 22/115 (19%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
IT+ GS+TN A+ P +K +IE I MGG++ GN+
Sbjct: 118 ITLVPTGSYTNVALLFSEYPEVKDHIERIVAMGGSLGK-----------------GNM-- 158
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNT 211
AEFN+F+DP AA + +SGIP+T++ LD T ++ + + E T
Sbjct: 159 ---TSAAEFNVFTDPDAARIMYNSGIPITMVGLDITMKALITPDSLSKLEHMNET 210
Score = 42.4 bits (98), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 11/126 (8%)
Query: 541 ELRQPLAVDVWKSIVESI-EPGSKITILTNGPLTNLAQIIG-LQNSSSVIQDVYIVGGNK 598
+L +PL V +++ E+I KIT++ G TN+A + I+ + +GG+
Sbjct: 94 DLPKPLDVSAVEALRETIMSSDEKITLVPTGSYTNVALLFSEYPEVKDHIERIVAMGGSL 153
Query: 599 GQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKL 658
G KGN+ + AEFN+F DP AA+ ++ S + I ++ L + + L KL
Sbjct: 154 G----KGNM-----TSAAEFNVFTDPDAARIMYNSGIPITMVGLDITMKALITPDSLSKL 204
Query: 659 RDRKKT 664
+T
Sbjct: 205 EHMNET 210
>gi|330448465|ref|ZP_08312113.1| inosine-uridine preferring nucleoside hydrolase [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
gi|328492656|dbj|GAA06610.1| inosine-uridine preferring nucleoside hydrolase [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
Length = 322
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 71/154 (46%), Gaps = 27/154 (17%)
Query: 51 PVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNF 108
PVG + V+ GL P A + +P A Q +I+++ A P IT+ +G TN
Sbjct: 74 PVGATVVVHGEAGLGDVTAPNSLDTKA-IEKP-AYQFIIDSVRANPGEITLVAVGPLTNL 131
Query: 109 AIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIF 168
A+ L P + ++ + VMGGA + D GN+ P+AE NI
Sbjct: 132 ALALEVAPDIVDLVKEVVVMGGAFGEN-------------DHRGNV-----TPFAEANIH 173
Query: 169 SDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFF 202
DP AA V + PV II LD T+ E+FF
Sbjct: 174 DDPHAADKVFTASWPVVIIGLDVTE-----ESFF 202
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 68/115 (59%), Gaps = 13/115 (11%)
Query: 551 WKSIVESIE--PGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEKGNV 607
++ I++S+ PG +IT++ GPLTNLA + + + ++++V ++GG G+++ +GNV
Sbjct: 106 YQFIIDSVRANPG-EITLVAVGPLTNLALALEVAPDIVDLVKEVVVMGGAFGENDHRGNV 164
Query: 608 FTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFF--KILHKLRD 660
+ +AE N+ DP AA VF + + +I L + SFF + L +LRD
Sbjct: 165 -----TPFAEANIHDDPHAADKVFTASWPVVIIGLDVTEE--SFFTSQYLDELRD 212
>gi|253686427|ref|YP_003015617.1| Inosine/uridine-preferring nucleoside hydrolase [Pectobacterium
carotovorum subsp. carotovorum PC1]
gi|251753005|gb|ACT11081.1| Inosine/uridine-preferring nucleoside hydrolase [Pectobacterium
carotovorum subsp. carotovorum PC1]
Length = 335
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 21/97 (21%)
Query: 96 PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY 155
PIT+ +G TN A+ L +P + + I+ I M A ++GN
Sbjct: 121 PITICALGPLTNLALALCFHPDVARGIKQIVSMSCAF----------------TAMGNRV 164
Query: 156 PDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
P +A+FN+++DP AA V SG+P+ I+PLD T
Sbjct: 165 P-----WADFNVYADPHAAEIVFSSGVPIVIMPLDMT 196
>gi|317491133|ref|ZP_07949569.1| inosine-uridine preferring nucleoside hydrolase [Enterobacteriaceae
bacterium 9_2_54FAA]
gi|316920680|gb|EFV42003.1| inosine-uridine preferring nucleoside hydrolase [Enterobacteriaceae
bacterium 9_2_54FAA]
Length = 316
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 49/118 (41%), Gaps = 22/118 (18%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
S P+TV G TN A+ L ++P L I I +MGGA +G
Sbjct: 115 SQQPVTVVATGPLTNIALLLTSHPELHAKIGRIVIMGGAAM-----------------LG 157
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQN 210
N P AEFNI+ DP AA V SG+P+ + LD T + F N
Sbjct: 158 NW-----TPAAEFNIYVDPEAAEIVFQSGLPIVMAGLDVTHRAQIMSEDIERFRHLSN 210
Score = 46.2 bits (108), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 101/260 (38%), Gaps = 59/260 (22%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +ALI L P + LK + S+ T+ +L ++ R
Sbjct: 1 MSLPIILDCDPGHDDAIALILALASPE--LELKAVTTSAGNQTPDKTLRNALRILTLLQR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA----RDLPRSP 520
DIPV G V P + +D ++G + DLP
Sbjct: 59 SDIPV------TGGAVKPLM----------------RELIIADNVHGESGLDGPDLPEPN 96
Query: 521 RRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIG 580
N+V A +++ S +P +T++ GPLTN+A ++
Sbjct: 97 FAPQTCNAVELIA------------------QTLRASQQP---VTVVATGPLTNIALLLT 135
Query: 581 LQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKL 639
+ I + I+GG N + AEFN+++DP AA+ VF+S L I +
Sbjct: 136 SHPELHAKIGRIVIMGGAAMLGN---------WTPAAEFNIYVDPEAAEIVFQSGLPIVM 186
Query: 640 IPLHMQRRVASFFKILHKLR 659
L + R + + + R
Sbjct: 187 AGLDVTHRAQIMSEDIERFR 206
>gi|314936752|ref|ZP_07844099.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
hominis subsp. hominis C80]
gi|418619379|ref|ZP_13182207.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus hominis
VCU122]
gi|313655371|gb|EFS19116.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
hominis subsp. hominis C80]
gi|374824425|gb|EHR88383.1| non-specific ribonucleoside hydrolase RihC [Staphylococcus hominis
VCU122]
Length = 300
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 69/131 (52%), Gaps = 14/131 (10%)
Query: 541 ELRQPLAVDVWKSIV-ESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNK 598
+L AV+ I+ S EP IT++T GPLTN+A + + ++++ I+GG+
Sbjct: 98 DLASSHAVEAMNEILSHSNEP---ITLVTLGPLTNIALLFNTYPECKNYVKEIIIMGGST 154
Query: 599 GQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKL 658
G +GNV + AEFN++ DP AA VF + L + +I L + R+ L L
Sbjct: 155 G----RGNV-----TPLAEFNIYCDPEAAHIVFNAGLPLTMIGLDLARQSLFTHSYLDTL 205
Query: 659 RDRKKTPESVF 669
+D KT + ++
Sbjct: 206 KDENKTTQMLY 216
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 66/153 (43%), Gaps = 31/153 (20%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
S PIT+ +G TN A+ P K ++ I +MGG+ G
Sbjct: 115 SNEPITLVTLGPLTNIALLFNTYPECKNYVKEIIIMGGSTGR-----------------G 157
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTY 212
N+ P AEFNI+ DP AA+ V ++G+P+T+I LD + + ++ + T
Sbjct: 158 NV-----TPLAEFNIYCDPEAAHIVFNAGLPLTMIGLDLARQSLFTHSYLDTLKDENKTT 212
Query: 213 EAQY-CFQSLKMIRDTWSGSPPFHEAYCMWDSF 244
+ Y FQ + F E ++D+F
Sbjct: 213 QMLYHIFQHYR--------GEDFKEGIKLYDAF 237
>gi|206576285|ref|YP_002240522.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae 342]
gi|226739308|sp|B5Y231.1|RIHC_KLEP3 RecName: Full=Non-specific ribonucleoside hydrolase RihC; AltName:
Full=Purine/pyrimidine ribonucleoside hydrolase
gi|206565343|gb|ACI07119.1| nonspecific ribonucleoside hydrolase RihC [Klebsiella pneumoniae
342]
Length = 304
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 70/135 (51%), Gaps = 16/135 (11%)
Query: 543 RQPLAVDVWKSIVESIEPGSK-ITILTNGPLTNLAQIIGLQNSSSV--IQDVYIVGGNKG 599
RQPLA +++I +++ ++ IT++ GPLTN+A ++ Q V I+ + I+GG+ G
Sbjct: 96 RQPLAKPAFQAIRDALMHAAEPITLVAIGPLTNIALLLT-QYPECVFNIRRLVIMGGSAG 154
Query: 600 QDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR---VASFFKILH 656
+ N N AEFN+ +DP AA VF S LEI + L + R A + L
Sbjct: 155 RGNFTPN---------AEFNIAIDPEAAAKVFHSGLEIVMCGLDVTNRALLAADYLATLP 205
Query: 657 KLRDRKKTPESVFSQ 671
L K ++FS
Sbjct: 206 TLNQTGKMLHALFSH 220
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 60/137 (43%), Gaps = 27/137 (19%)
Query: 80 RQPTAQ---QVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
RQP A+ Q + +A+ +A PIT+ +G TN A+ L P NI + +MGG+
Sbjct: 96 RQPLAKPAFQAIRDALMHAAEPITLVAIGPLTNIALLLTQYPECVFNIRRLVIMGGSAGR 155
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKT 194
GN P+ AEFNI DP AA V HSG+ + + LD T
Sbjct: 156 -----------------GNFTPN-----AEFNIAIDPEAAAKVFHSGLEIVMCGLDVTNR 193
Query: 195 IPVSENFFVEFERRQNT 211
++ ++ T
Sbjct: 194 ALLAADYLATLPTLNQT 210
>gi|194445998|ref|YP_002039904.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|418787960|ref|ZP_13343758.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19447]
gi|418793190|ref|ZP_13348924.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19449]
gi|418799346|ref|ZP_13355012.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19567]
gi|418807810|ref|ZP_13363368.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|418812350|ref|ZP_13367874.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|418815708|ref|ZP_13371209.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|418821112|ref|ZP_13376537.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|418827122|ref|ZP_13382283.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22462]
gi|418831986|ref|ZP_13386936.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|418835990|ref|ZP_13390881.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|418838973|ref|ZP_13393815.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|418849173|ref|ZP_13403908.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|418853387|ref|ZP_13408077.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
gi|226739285|sp|B4SYM0.1|RIHA_SALNS RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|194404661|gb|ACF64883.1| inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|392763664|gb|EJA20470.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19567]
gi|392764418|gb|EJA21217.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19447]
gi|392765465|gb|EJA22252.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19449]
gi|392777090|gb|EJA33776.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|392779073|gb|EJA35744.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|392790707|gb|EJA47200.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|392792160|gb|EJA48628.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|392798883|gb|EJA55154.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|392801557|gb|EJA57781.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22462]
gi|392803265|gb|EJA59466.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|392814799|gb|EJA70750.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|392822520|gb|EJA78332.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|392826780|gb|EJA82500.1| ribonucleoside hydrolase 1 [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
Length = 311
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 63/137 (45%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +APL TA +++ + S P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPEPA--FAPL-DCTAVELMAKVLRESPEPVTIVSTGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHAKIARIVIMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGI V + LD T
Sbjct: 176 IVFQSGIRVVMAGLDVT 192
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 103/252 (40%), Gaps = 67/252 (26%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++FD D D +A++ L P +++K I S+ T+ V +L ++ R
Sbjct: 1 MALPILFDCDPGHDDAIAIVLALASPE--LDVKAITSSAGNQTPDKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DI V A G V P L RDL
Sbjct: 59 TDISV------AGGAVKP-----------------------------LMRDL------II 77
Query: 525 AENSVRFGASQDNDDPELRQP-------LAVDVWKSIV-ESIEPGSKITILTNGPLTNLA 576
A+N D P L +P AV++ ++ ES EP +TI++ GP TN+A
Sbjct: 78 ADN---VHGESGLDGPALPEPAFAPLDCTAVELMAKVLRESPEP---VTIVSTGPQTNVA 131
Query: 577 QIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL 635
++ + I + I+GG G N + AEFN+++DP AA+ VF+S +
Sbjct: 132 LLLNSHPELHAKIARIVIMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGI 182
Query: 636 EIKLIPLHMQRR 647
+ + L + +
Sbjct: 183 RVVMAGLDVTHK 194
>gi|398816632|ref|ZP_10575279.1| Inosine-uridine nucleoside N-ribohydrolase [Brevibacillus sp. BC25]
gi|398032319|gb|EJL25664.1| Inosine-uridine nucleoside N-ribohydrolase [Brevibacillus sp. BC25]
Length = 309
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 26/158 (16%)
Query: 94 AGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGN 153
+G IT+ + G TN A+ + P L ++++ + MGG +R GN
Sbjct: 117 SGEITLIMTGPLTNLALAVKKCPELVQHVKEVIFMGGVVREH----------------GN 160
Query: 154 LYPDDSNPYAEFNIFSDPFAAYTVLHSGIP-VTIIPLDATKTIPVSENFFVEFERRQNTY 212
+ P AE+N++ DP AA V H+G P +T++ LD T+ + ++E E +T
Sbjct: 161 V-----TPVAEYNMYVDPEAAKVVFHAGFPQLTLVGLDVTRRVLLNEEHIREL---GDTP 212
Query: 213 EAQYCFQSLKMIRDTWSGSPPFHEAYCMWDSFMAGVAL 250
+Y QS + G + A M D VAL
Sbjct: 213 MGEYVRQSTSDYLHRYFGRNGVY-ACAMHDPLAVAVAL 249
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 61/111 (54%), Gaps = 9/111 (8%)
Query: 540 PELRQPLAVDVWKSIVESIEPGS-KITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNK 598
P ++P A IVE++ S +IT++ GPLTNLA + ++ ++Q V V
Sbjct: 95 PIYKEPTAGFAPDFIVENVLAHSGEITLIMTGPLTNLA--LAVKKCPELVQHVKEVIFMG 152
Query: 599 GQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKL-EIKLIPLHMQRRV 648
G E GNV V AE+NM++DP AAK VF + ++ L+ L + RRV
Sbjct: 153 GVVREHGNVTPV-----AEYNMYVDPEAAKVVFHAGFPQLTLVGLDVTRRV 198
>gi|418605934|ref|ZP_13169234.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis VCU041]
gi|420221314|ref|ZP_14726263.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIH04008]
gi|420232473|ref|ZP_14737109.1| Inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis NIH051668]
gi|374401003|gb|EHQ72099.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis VCU041]
gi|394284714|gb|EJE28814.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIH04008]
gi|394301203|gb|EJE44669.1| Inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis NIH051668]
Length = 313
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 96/198 (48%), Gaps = 10/198 (5%)
Query: 563 KITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFL 622
K+T+L GPLT+LA+ I NS +++++ + G +KGNV AE+N F
Sbjct: 120 KVTLLFTGPLTDLAKAIKYDNS--ILKNIEKLVWMGGTFLDKGNVEEPEHDGTAEWNAFW 177
Query: 623 DPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQ 682
DP A K V +S + + ++ L +V ++ D+++ F L +
Sbjct: 178 DPEAVKVVLDSDMIVDIVALESTNQVPLTMEVRQMWADKRQYLGVDF---LGTSYAAVPP 234
Query: 683 SHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLV 742
H + FL +VL + G+P+L ++ K+K ++++S G G+ E G+ V
Sbjct: 235 LTHFVTNSTYFLWDVLTTAYV-GSPNLVESTKLK-IDVVSQG--PSQGRTF-QSENGREV 289
Query: 743 KVLESLNVAVYYDHFAEV 760
+V+ +N ++ + ++
Sbjct: 290 QVITDVNKQAFFKYITDL 307
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 28/151 (18%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
+T+ G T+ A + + + KNIE + MGG GN+
Sbjct: 121 VTLLFTGPLTDLAKAIKYDNSILKNIEKLVWMGGTFLDK----------------GNVEE 164
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQY 216
+ + AE+N F DP A VL S + V I+ L++T +P++ E RQ + +
Sbjct: 165 PEHDGTAEWNAFWDPEAVKVVLDSDMIVDIVALESTNQVPLT------MEVRQ-MWADKR 217
Query: 217 CFQSLKMIRDTWSGSPPF-----HEAYCMWD 242
+ + + +++ PP + Y +WD
Sbjct: 218 QYLGVDFLGTSYAAVPPLTHFVTNSTYFLWD 248
>gi|302538456|ref|ZP_07290798.1| inosine-uridine preferring nucleoside hydrolase [Streptomyces sp.
C]
gi|302447351|gb|EFL19167.1| inosine-uridine preferring nucleoside hydrolase [Streptomyces sp.
C]
Length = 317
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 58/146 (39%), Gaps = 28/146 (19%)
Query: 96 PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY 155
P+T+ TN A+ L +P +I I +MGG S+G
Sbjct: 118 PVTLVPTAPLTNIALLLTRHPDSAGHIREIVLMGG-------------------SVG--- 155
Query: 156 PDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQ 215
P + P AEFN+ +DP AA V SG+PVT+ LD T + FE T
Sbjct: 156 PGNRTPAAEFNVCTDPEAAAVVFGSGVPVTMCGLDVTHQALATPEVLARFE-ALGTPIGS 214
Query: 216 YCFQSLKMI----RDTWS-GSPPFHE 236
C + L R W PP H+
Sbjct: 215 VCVELLTYFASAYRRLWGMPHPPLHD 240
Score = 46.2 bits (108), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 60/113 (53%), Gaps = 14/113 (12%)
Query: 547 AVD-VWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEK 604
AVD + + +VE EP +T++ PLTN+A ++ +S+ I+++ ++GG+ G N
Sbjct: 104 AVDLIHRILVEHPEP---VTLVPTAPLTNIALLLTRHPDSAGHIREIVLMGGSVGPGNR- 159
Query: 605 GNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHK 657
+ AEFN+ DP AA VF S + + + L + + + ++L +
Sbjct: 160 --------TPAAEFNVCTDPEAAAVVFGSGVPVTMCGLDVTHQALATPEVLAR 204
>gi|90419747|ref|ZP_01227656.1| inosine-uridine preferring nucleoside hydrolase hydrolase
[Aurantimonas manganoxydans SI85-9A1]
gi|90335788|gb|EAS49536.1| inosine-uridine preferring nucleoside hydrolase hydrolase
[Aurantimonas manganoxydans SI85-9A1]
Length = 327
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 105/258 (40%), Gaps = 61/258 (23%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M + V+FD D D +A++ L P EL ++ GI+ + S T LL + GR
Sbjct: 15 MTQKVIFDTDPGQDDAVAILTALASPEEL-DILGIVTVAGNIPLSLTTKNALKLLELAGR 73
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGL-ARDLPRSPRRY 523
+IPV GC+ PL + + T GL DLP
Sbjct: 74 PEIPVH-----------------AGCERPMLRPLVTAEHVHGQT--GLDGPDLPEPTLTA 114
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIE--PGSKITILTNGPLTNLA-QIIG 580
+ V F ++E+I P I ++ GPLTNL
Sbjct: 115 REGHGVDF----------------------LIETIRAHPAGTIRLMALGPLTNLGVAFTK 152
Query: 581 LQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLI 640
+ ++ ++D+ ++GG E GN+ + AEFN+++DP AA VF S I ++
Sbjct: 153 APDIAARLKDIVLMGGGC---FECGNI-----TPAAEFNIYVDPEAAAIVFASGAAITVL 204
Query: 641 PL---HMQR----RVASF 651
PL H R R+A F
Sbjct: 205 PLDVTHFMRSTRARIAGF 222
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 48/104 (46%), Gaps = 21/104 (20%)
Query: 89 INAISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQC 148
I A AG I + +G TN + P + ++ I +MGG CF +C
Sbjct: 127 IRAHPAGTIRLMALGPLTNLGVAFTKAPDIAARLKDIVLMGGG----CF---------EC 173
Query: 149 DSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
+I P AEFNI+ DP AA V SG +T++PLD T
Sbjct: 174 GNI--------TPAAEFNIYVDPEAAAIVFASGAAITVLPLDVT 209
>gi|206564301|ref|YP_002235064.1| putative inosine-uridine preferring nucleoside hydrolase
[Burkholderia cenocepacia J2315]
gi|444365094|ref|ZP_21165302.1| inosine-uridine preferring nucleoside hydrolase [Burkholderia
cenocepacia BC7]
gi|444372073|ref|ZP_21171571.1| inosine-uridine preferring nucleoside hydrolase [Burkholderia
cenocepacia K56-2Valvano]
gi|198040341|emb|CAR56326.1| putative inosine-uridine preferring nucleoside hydrolase
[Burkholderia cenocepacia J2315]
gi|443591587|gb|ELT60469.1| inosine-uridine preferring nucleoside hydrolase [Burkholderia
cenocepacia BC7]
gi|443594166|gb|ELT62837.1| inosine-uridine preferring nucleoside hydrolase [Burkholderia
cenocepacia K56-2Valvano]
Length = 350
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 59/133 (44%), Gaps = 24/133 (18%)
Query: 77 APLRQPTAQQVLINAIS-AGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIR 133
APL A L++ +S A P +T+ +G TN A L+ P ++ + I +MGGA
Sbjct: 135 APLAAGHAVSYLVDTLSRAAPNSVTLCALGPLTNIATALVEAPQIRAALRDIVLMGGAF- 193
Query: 134 SDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
F N + P AEFNI+ DP AA V SG+P+ ++P D
Sbjct: 194 ---FERGNIT-----------------PAAEFNIYVDPQAADVVFGSGVPIVVLPRDVAV 233
Query: 194 TIPVSENFFVEFE 206
P++ F
Sbjct: 234 KAPITPARVAPFR 246
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 47/81 (58%), Gaps = 9/81 (11%)
Query: 562 SKITILTNGPLTNLAQ-IIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNM 620
+ +T+ GPLTN+A ++ + ++D+ ++GG E+GN+ + AEFN+
Sbjct: 156 NSVTLCALGPLTNIATALVEAPQIRAALRDIVLMGG---AFFERGNI-----TPAAEFNI 207
Query: 621 FLDPLAAKAVFESKLEIKLIP 641
++DP AA VF S + I ++P
Sbjct: 208 YVDPQAADVVFGSGVPIVVLP 228
>gi|406026451|ref|YP_006725283.1| ribosylpyrimidine nucleosidase [Lactobacillus buchneri CD034]
gi|405124940|gb|AFR99700.1| ribosylpyrimidine nucleosidase [Lactobacillus buchneri CD034]
Length = 304
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 22/115 (19%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
IT+ GS+TN A+ P +K +IE I MGG++ GN+
Sbjct: 118 ITLVPTGSYTNVALLFSEYPEVKDHIERIVAMGGSLGK-----------------GNM-- 158
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNT 211
AEFN+F+DP AA + +SGIP+T++ LD T ++ + + E T
Sbjct: 159 ---TSAAEFNVFTDPDAARIMYNSGIPITMVGLDITMKALITPDSLSKLEHMNET 210
Score = 42.4 bits (98), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 11/126 (8%)
Query: 541 ELRQPLAVDVWKSIVESI-EPGSKITILTNGPLTNLAQIIG-LQNSSSVIQDVYIVGGNK 598
+L +PL V +++ E+I KIT++ G TN+A + I+ + +GG+
Sbjct: 94 DLPKPLDVSAVEALRETIMSSDEKITLVPTGSYTNVALLFSEYPEVKDHIERIVAMGGSL 153
Query: 599 GQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKL 658
G KGN+ + AEFN+F DP AA+ ++ S + I ++ L + + L KL
Sbjct: 154 G----KGNM-----TSAAEFNVFTDPDAARIMYNSGIPITMVGLDITMKALITPDSLSKL 204
Query: 659 RDRKKT 664
+T
Sbjct: 205 EHMNET 210
>gi|256848570|ref|ZP_05554011.1| inosine/uridine-preferring nucleoside hydrolase [Lactobacillus
coleohominis 101-4-CHN]
gi|256714622|gb|EEU29602.1| inosine/uridine-preferring nucleoside hydrolase [Lactobacillus
coleohominis 101-4-CHN]
Length = 306
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 22/143 (15%)
Query: 78 PLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCF 137
P+ + Q + ++ IT+ GS+TN A+ P +K +I+ I MGG++
Sbjct: 100 PIAKSAVQALRDTIMAEDEITLVPTGSYTNIALLFKEYPEVKSHIKQIVAMGGSL----- 154
Query: 138 NSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPV 197
S GN+ AEFN+F+DP AA + +SGIP+ ++ LD T +
Sbjct: 155 ------------SGGNM-----TSVAEFNVFTDPDAARIMYNSGIPIVMVGLDVTLKALL 197
Query: 198 SENFFVEFERRQNTYEAQYCFQS 220
+++ + + T + Y S
Sbjct: 198 TDDSLNQLKDMNETGKMLYGLIS 220
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 70/137 (51%), Gaps = 16/137 (11%)
Query: 544 QPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIG-LQNSSSVIQDVYIVGGNKGQDN 602
QP+A +++ ++I +IT++ G TN+A + S I+ + +GG+
Sbjct: 99 QPIAKSAVQALRDTIMAEDEITLVPTGSYTNIALLFKEYPEVKSHIKQIVAMGGSL---- 154
Query: 603 EKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRK 662
GN+ +V AEFN+F DP AA+ ++ S + I ++ L + + L++L+D
Sbjct: 155 SGGNMTSV-----AEFNVFTDPDAARIMYNSGIPIVMVGLDVTLKALLTDDSLNQLKDMN 209
Query: 663 KTPESVFSQRLLQGLMT 679
+T ++L GL++
Sbjct: 210 ET------GKMLYGLIS 220
>gi|423139117|ref|ZP_17126755.1| inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. houtenae str. ATCC BAA-1581]
gi|379051671|gb|EHY69562.1| inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. houtenae str. ATCC BAA-1581]
Length = 311
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 63/137 (45%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + S P+T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPALPE--PSFAP-QNCTAVELMAKTLRESPQPVTLVATGPQTNVALLLNSH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHAKIARIVTMGGAM-----------------GLGNW-----TPAAEFNIYVDPEAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SG+PV + LD T
Sbjct: 176 IVFQSGLPVVMAGLDVT 192
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 99/237 (41%), Gaps = 53/237 (22%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + +K I S+ T+ V +L ++ R
Sbjct: 1 MALPIIIDCDPGHDDAIALVLALASPE--LEVKAITSSAGNQTPDKTLRNVLRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DIPV A G V P + +D ++G + D P P
Sbjct: 59 PDIPV------AGGAVKPLM----------------RELIIADNVHGESGLDGPALP--- 93
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
E S A Q+ EL K++ ES +P +T++ GP TN+A ++
Sbjct: 94 --EPSF---APQNCTAVELMA-------KTLRESPQP---VTLVATGPQTNVALLLNSHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKL 639
+ I + +GG G N + AEFN+++DP AA+ VF+S L + +
Sbjct: 139 ELHAKIARIVTMGGAMGLGN---------WTPAAEFNIYVDPEAAEIVFQSGLPVVM 186
>gi|295692460|ref|YP_003601070.1| inosine-uridine preferring nucleoside hydrolase [Lactobacillus
crispatus ST1]
gi|295030566|emb|CBL50045.1| Inosine-uridine preferring nucleoside hydrolase [Lactobacillus
crispatus ST1]
Length = 308
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 24/109 (22%)
Query: 84 AQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTN 141
A ++ I + P IT+ +G T+FA+ P +K+NI I +MGG
Sbjct: 105 AATLMAKEIKSSPEKITLMGIGPLTDFALLFKQYPEVKENIAEIVIMGG----------- 153
Query: 142 SSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLD 190
N+ + +P+AE+NI DP AA V HSG+PV + PL+
Sbjct: 154 -----------NIGHGNHSPFAEYNIAGDPEAAQVVFHSGLPVKVAPLE 191
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 563 KITILTNGPLTNLAQIIG-LQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMF 621
KIT++ GPLT+ A + I ++ I+GGN G N S +AE+N+
Sbjct: 119 KITLMGIGPLTDFALLFKQYPEVKENIAEIVIMGGNIGHGNH---------SPFAEYNIA 169
Query: 622 LDPLAAKAVFESKLEIKLIPLHMQRR 647
DP AA+ VF S L +K+ PL + +
Sbjct: 170 GDPEAAQVVFHSGLPVKVAPLEIGNK 195
>gi|152970464|ref|YP_001335573.1| ribonucleoside hydrolase 1 [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|166226414|sp|A6T9S2.1|RIHA_KLEP7 RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|150955313|gb|ABR77343.1| pyrimidine specific nucleoside hydrolase [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
Length = 311
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 64/137 (46%), Gaps = 27/137 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ +AP + TA +++ + + S +T+ G TN A+ L ++
Sbjct: 81 VHGESGLDGPSLPEPA--FAP-QNCTAVELMASVLRESQESVTLVATGPQTNVALLLASH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P L I I +MGGA+ +GN P AEFNI+ DP AA
Sbjct: 138 PELHAKIARIVIMGGAM-----------------GLGNW-----QPAAEFNIYVDPQAAE 175
Query: 176 TVLHSGIPVTIIPLDAT 192
V SGIPV + LD T
Sbjct: 176 MVFQSGIPVVMAGLDVT 192
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 108/286 (37%), Gaps = 66/286 (23%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +AL+ L P + +K + S+ T+ V +L ++ R
Sbjct: 1 MALPIMIDCDPGHDDAIALVLALASPE--LEVKAVTASAGNQTPEKTLRNVLRMLTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV A G P L RDL
Sbjct: 59 PDIPV------AGGAWKP-----------------------------LMRDL------II 77
Query: 525 AENSVRFGASQDNDDPELRQP-------LAVDVWKSIVESIEPGSKITILTNGPLTNLAQ 577
A+N D P L +P AV++ S++ E +T++ GP TN+A
Sbjct: 78 ADN---VHGESGLDGPSLPEPAFAPQNCTAVELMASVLR--ESQESVTLVATGPQTNVAL 132
Query: 578 IIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLE 636
++ + I + I+GG G N + AEFN+++DP AA+ VF+S +
Sbjct: 133 LLASHPELHAKIARIVIMGGAMGLGNWQ---------PAAEFNIYVDPQAAEMVFQSGIP 183
Query: 637 IKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQ 682
+ + L + R + + R + P S LL M +
Sbjct: 184 VVMAGLDVTHRAQILPADIERFR-QIGNPVSTIVAELLDFFMAYHK 228
>gi|114046157|ref|YP_736707.1| ribonucleoside hydrolase 1 [Shewanella sp. MR-7]
gi|123131754|sp|Q0HZ05.1|RIHA_SHESR RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|113887599|gb|ABI41650.1| Purine nucleosidase [Shewanella sp. MR-7]
Length = 318
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 55/123 (44%), Gaps = 31/123 (25%)
Query: 79 LRQPTAQQVLINAI---------SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMG 129
L P+ Q +NA+ S P+T+ G TN A+ L ++ L IE I +MG
Sbjct: 92 LPAPSFQPQAVNAVELMAEKIRQSDKPVTLVPTGPLTNIALLLASHGELHAKIERIVLMG 151
Query: 130 GAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPL 189
GA +GN P AEFNIF DP AA V SGIP+T+ L
Sbjct: 152 GAA-----------------GVGNW-----TPAAEFNIFVDPEAADIVFKSGIPITMCGL 189
Query: 190 DAT 192
D T
Sbjct: 190 DVT 192
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 105/258 (40%), Gaps = 55/258 (21%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M +P++ D D D +ALI L P +N + S+ T+ +L ++ R
Sbjct: 1 MSRPIILDCDPGHDDAIALILALAHPE--LNPLAVTTSAGNQTPDKTLKNALRILTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYG-LARDLPRSPRRY 523
DIPV A G V P S + +D ++G D P P
Sbjct: 59 SDIPV------AGGAVKPL----------------SRELMIADNVHGETGLDGPALPA-- 94
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSK-ITILTNGPLTNLAQIIGLQ 582
P QP AV+ + + E I K +T++ GPLTN+A ++
Sbjct: 95 ----------------PSF-QPQAVNAVELMAEKIRQSDKPVTLVPTGPLTNIALLLASH 137
Query: 583 NS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
+ I+ + ++GG G N + AEFN+F+DP AA VF+S + I +
Sbjct: 138 GELHAKIERIVLMGGAAGVGN---------WTPAAEFNIFVDPEAADIVFKSGIPITMCG 188
Query: 642 LHMQRRVASFFKILHKLR 659
L + + + + ++R
Sbjct: 189 LDVTHQAQIMDEDIERIR 206
>gi|115477787|ref|NP_001062489.1| Os08g0557900 [Oryza sativa Japonica Group]
gi|75136136|sp|Q6ZJ05.1|URH1_ORYSJ RecName: Full=Probable uridine nucleosidase 1; AltName:
Full=Uridine ribohydrolase 1
gi|42407950|dbj|BAD09089.1| putative inosine-uridine nucleoside N-ribohydrolase [Oryza sativa
Japonica Group]
gi|113624458|dbj|BAF24403.1| Os08g0557900 [Oryza sativa Japonica Group]
gi|215694450|dbj|BAG89467.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641008|gb|EEE69140.1| hypothetical protein OsJ_28263 [Oryza sativa Japonica Group]
Length = 324
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 27/181 (14%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISA--GPITVFVMGSHTNFAIFLMN 114
+V+ + GL FLP K A + ++N +S G +++ +G TN A+ +
Sbjct: 88 FVHGSDGLGNLFLPAPTSKKV---DENAAEFMVNKVSQFPGEVSILALGPLTNVALAIKR 144
Query: 115 NPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAA 174
+P ++ I V+GGA F + N S P AE NI+ DP AA
Sbjct: 145 DPSFASKVKKIVVLGGAF----FAAGNVS-----------------PAAEANIYGDPEAA 183
Query: 175 YTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPF 234
V SG V ++ ++ T + ++ +E R AQ+ + RD + S F
Sbjct: 184 DIVFTSGADVDVVGINITTQVCFTDEDLLEL-RNSKGKHAQFLCDMCQFYRDWHAESDGF 242
Query: 235 H 235
H
Sbjct: 243 H 243
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 57/104 (54%), Gaps = 10/104 (9%)
Query: 560 PGSKITILTNGPLTNLAQIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEF 618
PG +++IL GPLTN+A I S +S ++ + ++G G GNV S AE
Sbjct: 124 PG-EVSILALGPLTNVALAIKRDPSFASKVKKIVVLG---GAFFAAGNV-----SPAAEA 174
Query: 619 NMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRK 662
N++ DP AA VF S ++ ++ +++ +V + L +LR+ K
Sbjct: 175 NIYGDPEAADIVFTSGADVDVVGINITTQVCFTDEDLLELRNSK 218
>gi|238762873|ref|ZP_04623841.1| Pyrimidine-specific ribonucleoside hydrolase rihA [Yersinia
kristensenii ATCC 33638]
gi|238698884|gb|EEP91633.1| Pyrimidine-specific ribonucleoside hydrolase rihA [Yersinia
kristensenii ATCC 33638]
Length = 312
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 22/100 (22%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
S P+T+ G TN A+ L + L I+ I +MGGA+ +G
Sbjct: 115 SPHPVTLVATGPLTNVALLLAGHGALAAKIDRIVIMGGAV-----------------MLG 157
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
N P AEFNIF DP AA V SGIP+T+ LD T
Sbjct: 158 NW-----TPAAEFNIFVDPEAADRVFKSGIPITMAGLDVT 192
Score = 46.2 bits (108), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 99/259 (38%), Gaps = 57/259 (22%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M + ++ D D D +ALI L P +N++ + + T+ +L ++ R
Sbjct: 1 MSRSIIIDCDPGHDDAIALILALASPE--LNVQAVTTCAGNQTPDKTLRNALRILTLLER 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA----RDLPRSP 520
DIPV A G + P + + +D ++G + LP
Sbjct: 59 QDIPV------AGGALKPLLREL----------------IIADNVHGESGLDGPSLPDPS 96
Query: 521 RRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIG 580
AEN+V A D P +T++ GPLTN+A ++
Sbjct: 97 FAPQAENAVELMARILRDSPH---------------------PVTLVATGPLTNVALLLA 135
Query: 581 LQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLI 640
+ + D ++ G G V + AEFN+F+DP AA VF+S + I +
Sbjct: 136 GHGALAAKIDRIVIMG--------GAVMLGNWTPAAEFNIFVDPEAADRVFKSGIPITMA 187
Query: 641 PLHMQRRVASFFKILHKLR 659
L + + + ++R
Sbjct: 188 GLDVTHQAQVMDADIDRIR 206
>gi|157961687|ref|YP_001501721.1| ribonucleoside hydrolase 1 [Shewanella pealeana ATCC 700345]
gi|157846687|gb|ABV87186.1| Inosine/uridine-preferring nucleoside hydrolase [Shewanella
pealeana ATCC 700345]
Length = 322
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 66/148 (44%), Gaps = 31/148 (20%)
Query: 51 PVGQRLYVNTNY----GLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGS 104
P+ + L + N GL LP +APL +A +++ + S +T+ G
Sbjct: 81 PLARELIIADNVHGESGLDGPKLPDPA--FAPLTI-SAIELMAQKVRESDEAVTLVPSGP 137
Query: 105 HTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAE 164
TN A+F+ P L IE I +MGGA + GN P AE
Sbjct: 138 LTNIALFIATYPELHSKIERIVLMGGAAEA-----------------GNW-----TPAAE 175
Query: 165 FNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
FNIF DP AA V SGIP+T+ LD T
Sbjct: 176 FNIFVDPEAADMVFKSGIPITMCGLDIT 203
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 106/255 (41%), Gaps = 55/255 (21%)
Query: 408 PVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDDI 467
P++ D D D ++LI L + + + + S+ T++ +L ++ R DI
Sbjct: 15 PIILDCDPGHDDAISLI--LAMSSKALKPLAVTTSAGNQTPDKTLNNALRILTLLERHDI 72
Query: 468 PVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRYTAE 526
PV G PK PL + +D ++G + D P+ P
Sbjct: 73 PVAAG--------APK-------------PLARE-LIIADNVHGESGLDGPKLP------ 104
Query: 527 NSVRFGASQDNDDPELRQPLAVDVWKSIVESI-EPGSKITILTNGPLTNLAQIIGL-QNS 584
DP PL + + + + + E +T++ +GPLTN+A I
Sbjct: 105 ------------DPAF-APLTISAIELMAQKVRESDEAVTLVPSGPLTNIALFIATYPEL 151
Query: 585 SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHM 644
S I+ + ++GG E GN + AEFN+F+DP AA VF+S + I + L +
Sbjct: 152 HSKIERIVLMGGAA----EAGN-----WTPAAEFNIFVDPEAADMVFKSGIPITMCGLDI 202
Query: 645 QRRVASFFKILHKLR 659
+ + + ++R
Sbjct: 203 THQAQIMDEDIERIR 217
>gi|408405188|ref|YP_006863171.1| inosine-uridine preferring nucleoside hydrolase [Candidatus
Nitrososphaera gargensis Ga9.2]
gi|408365784|gb|AFU59514.1| putative inosine-uridine preferring nucleoside hydrolase
[Candidatus Nitrososphaera gargensis Ga9.2]
Length = 323
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 54/121 (44%), Gaps = 16/121 (13%)
Query: 95 GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNL 154
G +++ G TN A + +P + ++ IYVMGGA D GN+
Sbjct: 126 GEVSLIATGPLTNVAKAIAADPSIVDSLSGIYVMGGAY-----------GLASKDVYGNI 174
Query: 155 YPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEA 214
PYAEFN + DP AA V+ SG + ++ LD TK V + F R + A
Sbjct: 175 -----TPYAEFNFYCDPAAAQIVMDSGAKMNVVGLDTTKRYLVDDTFVARLLRSRKNKAA 229
Query: 215 Q 215
+
Sbjct: 230 K 230
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 70/141 (49%), Gaps = 12/141 (8%)
Query: 538 DDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS-SSVIQDVYIVGG 596
D+ LR+ A +++ G +++++ GPLTN+A+ I S + +Y++GG
Sbjct: 103 DESLLRRDGAPHFISQTLKNYRKG-EVSLIATGPLTNVAKAIAADPSIVDSLSGIYVMGG 161
Query: 597 NKGQDNEK--GNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR--VASFF 652
G ++ GN+ + YAEFN + DP AA+ V +S ++ ++ L +R V F
Sbjct: 162 AYGLASKDVYGNI-----TPYAEFNFYCDPAAAQIVMDSGAKMNVVGLDTTKRYLVDDTF 216
Query: 653 KILHKLRDRKKTPESVFSQRL 673
+ LR RK + S L
Sbjct: 217 -VARLLRSRKNKAAKITSSLL 236
>gi|441502895|ref|ZP_20984902.1| Inosine-uridine preferring nucleoside hydrolase [Photobacterium sp.
AK15]
gi|441429111|gb|ELR66566.1| Inosine-uridine preferring nucleoside hydrolase [Photobacterium sp.
AK15]
Length = 311
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 107/261 (40%), Gaps = 61/261 (23%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M +P++ D D D +ALI P +++K + S+ T++ +L ++GR
Sbjct: 1 MTRPIIIDCDPGHDDAIALILACASPS--LDIKAVTTSAGNQTPEKTLNNALRILTLLGR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
+DIPV +GG L LAR+L
Sbjct: 59 NDIPV------------------------------AGGALKP-----LAREL------II 77
Query: 525 AENSVRFGASQDNDDPELRQPLAVDVWKSIVESI-----EPGSKITILTNGPLTNLAQII 579
A+N D P L P V ++ VE + E +T++ GPLTN+A ++
Sbjct: 78 ADN---VHGESGLDGPSLPDPGFDPVGENAVELMARVLRESDRPVTLVPTGPLTNIALLL 134
Query: 580 GLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIK 638
+ I+ + ++GG E GN S AEFN+++DP AA VF S + +
Sbjct: 135 ATHRELADKIERIVLMGGGA----ETGN-----WSPAAEFNIYVDPEAADIVFRSGIPVT 185
Query: 639 LIPLHMQRRVASFFKILHKLR 659
+ L + R + + ++R
Sbjct: 186 MCGLDVTHRAQIMDEDIERIR 206
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 66/148 (44%), Gaps = 31/148 (20%)
Query: 51 PVGQRLYVNTNY----GLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGS 104
P+ + L + N GL LP G + P+ + A +++ + S P+T+ G
Sbjct: 70 PLARELIIADNVHGESGLDGPSLPDPG--FDPVGE-NAVELMARVLRESDRPVTLVPTGP 126
Query: 105 HTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAE 164
TN A+ L + L IE I +MGG + GN +P AE
Sbjct: 127 LTNIALLLATHRELADKIERIVLMGGGAET-----------------GNW-----SPAAE 164
Query: 165 FNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
FNI+ DP AA V SGIPVT+ LD T
Sbjct: 165 FNIYVDPEAADIVFRSGIPVTMCGLDVT 192
>gi|261346279|ref|ZP_05973923.1| cytidine/uridine-specific hydrolase [Providencia rustigianii DSM
4541]
gi|282565590|gb|EFB71125.1| cytidine/uridine-specific hydrolase [Providencia rustigianii DSM
4541]
Length = 292
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 72/188 (38%), Gaps = 41/188 (21%)
Query: 95 GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNL 154
G +T+ M S TN AI ++ P L N++ I VMGGA + GN+
Sbjct: 101 GEVTLCAMASLTNIAIAIIKEPKLVDNVKDIVVMGGAAFTQ----------------GNI 144
Query: 155 YPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEA 214
P AEFN + DP AA+ V S +T++ LD T + E+
Sbjct: 145 -----TPAAEFNFYVDPHAAHIVFDSARHITMLGLDVTSKADIRAGLCTSLEKGD----- 194
Query: 215 QYCFQSLKMIRDTWSGSPPFHE----AYCMWDSFMAGVALSIMLNSSSH----------- 259
+ +M R P H+ AY + +GV SI + S+
Sbjct: 195 VIALKVAEMCRRYAECDPFLHDPCVIAYLIQPEIFSGVDGSITIEYESNRLFGHSLATIS 254
Query: 260 NGENACSE 267
N CSE
Sbjct: 255 TATNHCSE 262
>gi|392971679|ref|ZP_10337072.1| possible ribosylpyrimidine nucleosidase [Staphylococcus equorum
subsp. equorum Mu2]
gi|403047001|ref|ZP_10902470.1| ribonucleoside hydrolase RihC [Staphylococcus sp. OJ82]
gi|392510218|emb|CCI60360.1| possible ribosylpyrimidine nucleosidase [Staphylococcus equorum
subsp. equorum Mu2]
gi|402763697|gb|EJX17790.1| ribonucleoside hydrolase RihC [Staphylococcus sp. OJ82]
Length = 302
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 53/106 (50%), Gaps = 22/106 (20%)
Query: 96 PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY 155
PIT+ +G TN A+ L P +K I+ I +MGG+ GN+
Sbjct: 118 PITLIPIGPLTNIALLLSTYPEVKDYIKEIVLMGGSAGR-----------------GNV- 159
Query: 156 PDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENF 201
P AEFNI+ DP AA V +SG+P+T++ LD ++ +S F
Sbjct: 160 ----TPLAEFNIYCDPEAAQIVFNSGLPLTMVGLDVARSSTLSHTF 201
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 13/114 (11%)
Query: 552 KSIVESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEKGNVFTV 610
K+++ S P IT++ GPLTN+A ++ I+++ ++GG+ G +GNV
Sbjct: 110 KALISSEIP---ITLIPIGPLTNIALLLSTYPEVKDYIKEIVLMGGSAG----RGNV--- 159
Query: 611 PSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKT 664
+ AEFN++ DP AA+ VF S L + ++ L + R ++KL +T
Sbjct: 160 --TPLAEFNIYCDPEAAQIVFNSGLPLTMVGLDVARSSTLSHTFVNKLSTLNET 211
>gi|323487727|ref|ZP_08092985.1| Ribosylpyrimidine nucleosidase [Planococcus donghaensis MPA1U2]
gi|323398461|gb|EGA91249.1| Ribosylpyrimidine nucleosidase [Planococcus donghaensis MPA1U2]
Length = 319
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 79/200 (39%), Gaps = 35/200 (17%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
IT+ G TN A L+ +P +K NIE I MGGA GN+
Sbjct: 120 ITIVATGPLTNVAALLLAHPEVKTNIERISWMGGAAVG-----------------GNM-- 160
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQN-----T 211
+P AEFN + DP A V SGIP+ + LD V+ FV E +N T
Sbjct: 161 ---SPSAEFNAYVDPHAVEIVFRSGIPIVMSGLD------VTHKAFVTIEEAKNILAIGT 211
Query: 212 YEAQYCFQSLKMIRDTWSGSPPFHEA-YCMWDSFMAGVALSIMLNSSSHNGENACSEMEY 270
A+ + + D + PFHEA Y F A+ +L G++ E+
Sbjct: 212 EFAEKAYHLVTYYLDVIKRT-PFHEANYDQVLHFHDVCAVMYLLKPEYFKGQDCYVEVAL 270
Query: 271 MNLTVVTSNEPYGISDGSNP 290
+T + Y G P
Sbjct: 271 EGVTAGATVVDYTNRSGKMP 290
>gi|330830419|ref|YP_004393371.1| Inosine-uridine preferring nucleoside hydrolase superfamily protein
[Aeromonas veronii B565]
gi|328805555|gb|AEB50754.1| Inosine-uridine preferring nucleoside hydrolase superfamily
[Aeromonas veronii B565]
Length = 311
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 75/180 (41%), Gaps = 37/180 (20%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
S P+T+ G TN A+ L +P LK I I +MGG + G
Sbjct: 115 SPEPVTLVPTGPLTNIALLLAAHPELKPKIARIVLMGGTAGA-----------------G 157
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFER-RQNT 211
N P AEFNI+ DP AA V SGIP+T+ LD T V + + ER R T
Sbjct: 158 NW-----TPAAEFNIYVDPEAADMVFKSGIPITMCGLDVTHEAQVMDE---DIERVRTIT 209
Query: 212 YEAQYCFQSLK---MI--RD-TW--SGSP---PFHEAYCMWDSFMAGVALSIMLNSSSHN 260
C L MI RD W +G+P P A+ + GV + + +S +
Sbjct: 210 NPVAQCVAGLLDFFMIYHRDPKWGFAGAPLHDPCTIAWLLAPELFHGVECRVDIETSGEH 269
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 106/257 (41%), Gaps = 53/257 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M PV+ D D D +ALI L P + + + S+ T++ +L ++GR
Sbjct: 1 MALPVILDCDPGHDDAIALILALASPE--LKVLAVTTSAGNQTPDKTLNNALRILTLLGR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DDIPV G PK PL + +D ++G + D P+ P
Sbjct: 59 DDIPVAAG--------APK-------------PLARE-LIIADNVHGESGLDGPKLPDPA 96
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQN 583
A ++ EL + + ES EP +T++ GPLTN+A ++
Sbjct: 97 FAPQAMT--------GIELMA-------RCLRESPEP---VTLVPTGPLTNIALLLAAHP 138
Query: 584 S-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
I + ++GG G N + AEFN+++DP AA VF+S + I + L
Sbjct: 139 ELKPKIARIVLMGGTAGAGN---------WTPAAEFNIYVDPEAADMVFKSGIPITMCGL 189
Query: 643 HMQRRVASFFKILHKLR 659
+ + + ++R
Sbjct: 190 DVTHEAQVMDEDIERVR 206
>gi|170701564|ref|ZP_02892513.1| Inosine/uridine-preferring nucleoside hydrolase [Burkholderia
ambifaria IOP40-10]
gi|170133528|gb|EDT01907.1| Inosine/uridine-preferring nucleoside hydrolase [Burkholderia
ambifaria IOP40-10]
Length = 350
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 59/133 (44%), Gaps = 24/133 (18%)
Query: 77 APLRQPTAQQVLINAIS-AGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIR 133
APL A L++ +S A P +T+ +G TN A L+ P ++ + I +MGGA
Sbjct: 135 APLAAGHAVSYLVDTLSRAAPNSVTLCALGPLTNIATALVEAPQIRGALREIVLMGGAF- 193
Query: 134 SDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
F N + P AEFNI+ DP AA V SG+P+ ++P D
Sbjct: 194 ---FERGNIT-----------------PAAEFNIYVDPQAAEIVFGSGVPIVVLPRDVAV 233
Query: 194 TIPVSENFFVEFE 206
P++ F
Sbjct: 234 KAPITPARVAPFR 246
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 58/105 (55%), Gaps = 12/105 (11%)
Query: 541 ELRQPLAVDVWKS-IVESIEPGS--KITILTNGPLTNLAQ-IIGLQNSSSVIQDVYIVGG 596
E R PLA S +V+++ + +T+ GPLTN+A ++ ++++ ++GG
Sbjct: 132 EPRAPLAAGHAVSYLVDTLSRAAPNSVTLCALGPLTNIATALVEAPQIRGALREIVLMGG 191
Query: 597 NKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
E+GN+ + AEFN+++DP AA+ VF S + I ++P
Sbjct: 192 ---AFFERGNI-----TPAAEFNIYVDPQAAEIVFGSGVPIVVLP 228
>gi|154495801|ref|ZP_02034497.1| hypothetical protein BACCAP_00080 [Bacteroides capillosus ATCC
29799]
gi|150274999|gb|EDN02047.1| Inosine-uridine preferring nucleoside hydrolase
[Pseudoflavonifractor capillosus ATCC 29799]
Length = 310
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 65/153 (42%), Gaps = 26/153 (16%)
Query: 79 LRQPTAQQVLINAISA--GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDC 136
LR+ A V+ A G + + G TN AI L P L K I+ + VMGG C
Sbjct: 100 LREEKAWDVIWREAKALDGELELIATGPLTNLAIALAKYPDLPKYIKKLTVMGGGA---C 156
Query: 137 FNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIP 196
F GN + P AEFNI++DP AA V SG+P+ + LD
Sbjct: 157 F--------------GN-----ATPAAEFNIYADPEAAEMVFRSGMPIALCGLDVCYQAS 197
Query: 197 VSENFFVEFERRQNTYEAQYCFQSLKMIRDTWS 229
+ E E T +A + +L + +W+
Sbjct: 198 LVEEDIAALE-AMGTVQAAFS-AALSRLELSWA 228
>gi|113971637|ref|YP_735430.1| ribonucleoside hydrolase 1 [Shewanella sp. MR-4]
gi|123029332|sp|Q0HEZ4.1|RIHA_SHESM RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|113886321|gb|ABI40373.1| Purine nucleosidase [Shewanella sp. MR-4]
Length = 318
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 55/123 (44%), Gaps = 31/123 (25%)
Query: 79 LRQPTAQQVLINAI---------SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMG 129
L P+ Q +NA+ S P+T+ G TN A+ L ++ L IE I +MG
Sbjct: 92 LPAPSFQPQAVNAVELMAEKIRQSDKPVTLVPTGPLTNIALLLASHGELHAKIERIVLMG 151
Query: 130 GAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPL 189
GA +GN P AEFNIF DP AA V SGIP+T+ L
Sbjct: 152 GAA-----------------GVGNW-----TPAAEFNIFVDPEAADIVFKSGIPITMCGL 189
Query: 190 DAT 192
D T
Sbjct: 190 DVT 192
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 106/258 (41%), Gaps = 55/258 (21%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M +P++ D D D +ALI L P +N + S+ T++ +L ++ R
Sbjct: 1 MSRPIILDCDPGHDDAIALILALAHPE--LNPLAVTTSAGNQTPDKTLNNALRILTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYG-LARDLPRSPRRY 523
DIPV A G V P S + +D ++G D P P
Sbjct: 59 SDIPV------AGGAVKPL----------------SRELMIADNVHGETGLDGPALPA-- 94
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSK-ITILTNGPLTNLAQIIGLQ 582
P QP AV+ + + E I K +T++ GPLTN+A ++
Sbjct: 95 ----------------PSF-QPQAVNAVELMAEKIRQSDKPVTLVPTGPLTNIALLLASH 137
Query: 583 NS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
+ I+ + ++GG G N + AEFN+F+DP AA VF+S + I +
Sbjct: 138 GELHAKIERIVLMGGAAGVGN---------WTPAAEFNIFVDPEAADIVFKSGIPITMCG 188
Query: 642 LHMQRRVASFFKILHKLR 659
L + + + + ++R
Sbjct: 189 LDVTHQAQIMDEDIERIR 206
>gi|429083568|ref|ZP_19146605.1| Inosine-uridine preferring nucleoside hydrolase [Cronobacter
condimenti 1330]
gi|426547532|emb|CCJ72646.1| Inosine-uridine preferring nucleoside hydrolase [Cronobacter
condimenti 1330]
Length = 305
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 71/134 (52%), Gaps = 14/134 (10%)
Query: 543 RQPLAVDVWKSIVESIEPGSK-ITILTNGPLTNLAQIIGLQNSS-SVIQDVYIVGGNKGQ 600
RQ L + ++++ E + + +TI+T GPLTNLA ++ SS + I+ + ++GG+ G+
Sbjct: 97 RQTLGIPAFQAMYERLMASDEPLTIVTIGPLTNLALLLTHYPSSMAKIKRLVMMGGSAGR 156
Query: 601 DNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR---VASFFKILHK 657
N N AEFN+ +DP AA VFES +EI + L + ++ V + L
Sbjct: 157 GNFTPN---------AEFNIAIDPEAAARVFESGIEIVMCGLDVTQQAVLVPDYLAALPA 207
Query: 658 LRDRKKTPESVFSQ 671
L + ++FS
Sbjct: 208 LSQTGRMLHAIFSH 221
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 22/98 (22%)
Query: 96 PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY 155
P+T+ +G TN A+ L + P I+ + +MGG+ GN
Sbjct: 118 PLTIVTIGPLTNLALLLTHYPSSMAKIKRLVMMGGSAGR-----------------GNFT 160
Query: 156 PDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
P+ AEFNI DP AA V SGI + + LD T+
Sbjct: 161 PN-----AEFNIAIDPEAAARVFESGIEIVMCGLDVTQ 193
>gi|152968606|ref|YP_001333715.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238893011|ref|YP_002917745.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|378976894|ref|YP_005225035.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|402782488|ref|YP_006638034.1| inosine-uridine preferring nucleoside hydrolase [Klebsiella
pneumoniae subsp. pneumoniae 1084]
gi|419973539|ref|ZP_14488963.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|419980054|ref|ZP_14495341.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|419985074|ref|ZP_14500217.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|419990159|ref|ZP_14505132.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|419996038|ref|ZP_14510842.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|420003039|ref|ZP_14517687.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|420007913|ref|ZP_14522405.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|420013883|ref|ZP_14528192.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|420019193|ref|ZP_14533387.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|420024685|ref|ZP_14538697.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|420031678|ref|ZP_14545498.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|420037880|ref|ZP_14551531.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|420042236|ref|ZP_14555730.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|420048314|ref|ZP_14561628.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|420053644|ref|ZP_14566821.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|420059514|ref|ZP_14572521.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|420065133|ref|ZP_14577940.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|420071525|ref|ZP_14584170.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|420075934|ref|ZP_14588408.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|420083610|ref|ZP_14595888.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|421910767|ref|ZP_16340542.1| Inosine-uridine preferring nucleoside hydrolase [Klebsiella
pneumoniae subsp. pneumoniae ST258-K26BO]
gi|421917451|ref|ZP_16347006.1| Inosine-uridine preferring nucleoside hydrolase [Klebsiella
pneumoniae subsp. pneumoniae ST258-K28BO]
gi|424935145|ref|ZP_18353517.1| Non-specific ribonucleoside hydrolase rihC 1 (Purine/pyrimidine
ribonucleoside hydrolase 1) [Klebsiella pneumoniae
subsp. pneumoniae KpQ3]
gi|425079800|ref|ZP_18482897.1| non-specific ribonucleoside hydrolase rihC [Klebsiella pneumoniae
subsp. pneumoniae WGLW2]
gi|425089918|ref|ZP_18493003.1| non-specific ribonucleoside hydrolase rihC [Klebsiella pneumoniae
subsp. pneumoniae WGLW5]
gi|428152872|ref|ZP_19000522.1| Inosine-uridine preferring nucleoside hydrolase [Klebsiella
pneumoniae subsp. pneumoniae ST512-K30BO]
gi|428933637|ref|ZP_19007184.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae JHCK1]
gi|428941904|ref|ZP_19014929.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae VA360]
gi|166226420|sp|A6T4G4.1|RIHC_KLEP7 RecName: Full=Non-specific ribonucleoside hydrolase RihC; AltName:
Full=Purine/pyrimidine ribonucleoside hydrolase
gi|150953455|gb|ABR75485.1| nucleoside hydrolase [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|238545327|dbj|BAH61678.1| nucleoside hydrolase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|238774014|dbj|BAH66511.1| nucleoside hydrolase [Klebsiella pneumoniae NTUH-K2044]
gi|238774035|dbj|BAH66531.1| nucleoside hydrolase [Klebsiella pneumoniae]
gi|364516305|gb|AEW59433.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|397346970|gb|EJJ40080.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|397348178|gb|EJJ41280.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|397353058|gb|EJJ46135.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|397366159|gb|EJJ58778.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|397367774|gb|EJJ60383.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|397370346|gb|EJJ62929.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|397379205|gb|EJJ71403.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|397383999|gb|EJJ76126.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|397389359|gb|EJJ81301.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|397398622|gb|EJJ90284.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|397399825|gb|EJJ91475.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|397404837|gb|EJJ96323.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|397415502|gb|EJK06687.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|397416885|gb|EJK08055.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|397423872|gb|EJK14789.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|397432220|gb|EJK22884.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|397435512|gb|EJK26127.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|397440165|gb|EJK30579.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|397447896|gb|EJK38081.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|397451033|gb|EJK41125.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|402543343|gb|AFQ67492.1| Inosine-uridine preferring nucleoside hydrolase [Klebsiella
pneumoniae subsp. pneumoniae 1084]
gi|405606725|gb|EKB79695.1| non-specific ribonucleoside hydrolase rihC [Klebsiella pneumoniae
subsp. pneumoniae WGLW2]
gi|405614482|gb|EKB87181.1| non-specific ribonucleoside hydrolase rihC [Klebsiella pneumoniae
subsp. pneumoniae WGLW5]
gi|407809332|gb|EKF80583.1| Non-specific ribonucleoside hydrolase rihC 1 (Purine/pyrimidine
ribonucleoside hydrolase 1) [Klebsiella pneumoniae
subsp. pneumoniae KpQ3]
gi|410115419|emb|CCM83167.1| Inosine-uridine preferring nucleoside hydrolase [Klebsiella
pneumoniae subsp. pneumoniae ST258-K26BO]
gi|410120342|emb|CCM89631.1| Inosine-uridine preferring nucleoside hydrolase [Klebsiella
pneumoniae subsp. pneumoniae ST258-K28BO]
gi|426299658|gb|EKV61983.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae VA360]
gi|426304773|gb|EKV66909.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae JHCK1]
gi|427537270|emb|CCM96660.1| Inosine-uridine preferring nucleoside hydrolase [Klebsiella
pneumoniae subsp. pneumoniae ST512-K30BO]
Length = 304
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 70/135 (51%), Gaps = 16/135 (11%)
Query: 543 RQPLAVDVWKSIVESIEPGSK-ITILTNGPLTNLAQIIGLQNSSSV--IQDVYIVGGNKG 599
RQPLA +++I +++ ++ IT++ GPLTN+A ++ Q V I+ + I+GG+ G
Sbjct: 96 RQPLAKPAFQAIRDALMHAAEPITLVAIGPLTNIALLLT-QYPECVFNIRRLVIMGGSAG 154
Query: 600 QDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR---VASFFKILH 656
+ N N AEFN+ +DP AA VF S LEI + L + R A + L
Sbjct: 155 RGNFTPN---------AEFNIAIDPEAAAKVFHSGLEIVMCGLDVTNRALLAADYLATLP 205
Query: 657 KLRDRKKTPESVFSQ 671
L K ++FS
Sbjct: 206 TLNQTGKMLHALFSH 220
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 60/137 (43%), Gaps = 27/137 (19%)
Query: 80 RQPTAQ---QVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
RQP A+ Q + +A+ +A PIT+ +G TN A+ L P NI + +MGG+
Sbjct: 96 RQPLAKPAFQAIRDALMHAAEPITLVAIGPLTNIALLLTQYPECVFNIRRLVIMGGSAGR 155
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKT 194
GN P+ AEFNI DP AA V HSG+ + + LD T
Sbjct: 156 -----------------GNFTPN-----AEFNIAIDPEAAAKVFHSGLEIVMCGLDVTNR 193
Query: 195 IPVSENFFVEFERRQNT 211
++ ++ T
Sbjct: 194 ALLAADYLATLPTLNQT 210
>gi|290512625|ref|ZP_06551991.1| purine nucleosidase [Klebsiella sp. 1_1_55]
gi|289774966|gb|EFD82968.1| purine nucleosidase [Klebsiella sp. 1_1_55]
Length = 304
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 70/135 (51%), Gaps = 16/135 (11%)
Query: 543 RQPLAVDVWKSIVESIEPGSK-ITILTNGPLTNLAQIIGLQNSSSV--IQDVYIVGGNKG 599
RQPLA +++I +++ ++ IT++ GPLTN+A ++ Q V I+ + I+GG+ G
Sbjct: 96 RQPLAKPAFQAIRDALMHAAEPITLVAIGPLTNIALLLT-QYPECVFNIRRLVIMGGSAG 154
Query: 600 QDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR---VASFFKILH 656
+ N N AEFN+ +DP AA VF S LEI + L + R A + L
Sbjct: 155 RGNFTPN---------AEFNIAIDPEAAAKVFHSGLEIVMCGLDVTNRALLAADYLATLP 205
Query: 657 KLRDRKKTPESVFSQ 671
L K ++FS
Sbjct: 206 TLNQTGKMLHALFSH 220
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 60/137 (43%), Gaps = 27/137 (19%)
Query: 80 RQPTAQ---QVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
RQP A+ Q + +A+ +A PIT+ +G TN A+ L P NI + +MGG+
Sbjct: 96 RQPLAKPAFQAIRDALMHAAEPITLVAIGPLTNIALLLTQYPECVFNIRRLVIMGGSAGR 155
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKT 194
GN P+ AEFNI DP AA V HSG+ + + LD T
Sbjct: 156 -----------------GNFTPN-----AEFNIAIDPEAAAKVFHSGLEIVMCGLDVTNR 193
Query: 195 IPVSENFFVEFERRQNT 211
++ ++ T
Sbjct: 194 ALLAADYLATLPTLNQT 210
>gi|115359370|ref|YP_776508.1| inosine/uridine-preferring nucleoside hydrolase [Burkholderia
ambifaria AMMD]
gi|115284658|gb|ABI90174.1| Inosine/uridine-preferring nucleoside hydrolase [Burkholderia
ambifaria AMMD]
Length = 350
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 59/133 (44%), Gaps = 24/133 (18%)
Query: 77 APLRQPTAQQVLINAIS-AGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIR 133
APL A L++ +S A P +T+ +G TN A L+ P ++ + I +MGGA
Sbjct: 135 APLAAGHAVSYLVDTLSRAAPNSVTLCALGPLTNIATALVEAPQIRGALREIVLMGGAF- 193
Query: 134 SDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
F N + P AEFNI+ DP AA V SG+P+ ++P D
Sbjct: 194 ---FERGNIT-----------------PAAEFNIYVDPQAAEIVFGSGVPIVVLPRDVAV 233
Query: 194 TIPVSENFFVEFE 206
P++ F
Sbjct: 234 KAPITPARVAPFR 246
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 58/105 (55%), Gaps = 12/105 (11%)
Query: 541 ELRQPLAVDVWKS-IVESIEPGS--KITILTNGPLTNLAQ-IIGLQNSSSVIQDVYIVGG 596
E R PLA S +V+++ + +T+ GPLTN+A ++ ++++ ++GG
Sbjct: 132 EPRAPLAAGHAVSYLVDTLSRAAPNSVTLCALGPLTNIATALVEAPQIRGALREIVLMGG 191
Query: 597 NKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
E+GN+ + AEFN+++DP AA+ VF S + I ++P
Sbjct: 192 ---AFFERGNI-----TPAAEFNIYVDPQAAEIVFGSGVPIVVLP 228
>gi|384048860|ref|YP_005496877.1| inosine-uridine preferring nucleoside hydrolase family protein
[Bacillus megaterium WSH-002]
gi|345446551|gb|AEN91568.1| Inosine-uridine preferring nucleoside hydrolase family protein
[Bacillus megaterium WSH-002]
Length = 314
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 101/252 (40%), Gaps = 35/252 (13%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMS---TAGECRYRQAIPVGQRLY 57
++ DD V V G I +G + P + Q IID+ S + R P +
Sbjct: 22 LLQMDD--VKVTGVSVIPADGYLEPGISASQKIIDRFGSYDIEVAKSTSRGMNPFPKEWR 79
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
++T Y L + G+ + Q A LI + + G T+ G T+ A L
Sbjct: 80 MHTFYVDALPILNEKGKVQTKISQLPAHDHLIETLQHTDGKTTLLFTGPLTDLARALEKA 139
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P +++ I+ + MGG + +GN+ + + AE+N F DP A
Sbjct: 140 PEIEEKIDKLVWMGGTFQE----------------VGNVQEPEHDGTAEWNAFWDPEAVA 183
Query: 176 TVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPF- 234
V S I + ++ L++T +P++ + + + ++ + + ++ PP
Sbjct: 184 KVWESSIKIEMVALESTNQVPLTPAI-------RQMWASLRRYEGVDFVGQCYAACPPLV 236
Query: 235 ----HEAYCMWD 242
+ Y +WD
Sbjct: 237 HVETNSTYYLWD 248
Score = 46.2 bits (108), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 93/206 (45%), Gaps = 24/206 (11%)
Query: 563 KITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFL 622
K T+L GPLT+LA+ L+ + + + + + G E GNV AE+N F
Sbjct: 120 KTTLLFTGPLTDLAR--ALEKAPEIEEKIDKLVWMGGTFQEVGNVQEPEHDGTAEWNAFW 177
Query: 623 DPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQ 682
DP A V+ES ++I+++ L +V I S R +G+ + Q
Sbjct: 178 DPEAVAKVWESSIKIEMVALESTNQVPLTPAIRQMWA----------SLRRYEGVDFVGQ 227
Query: 683 SHHS---YHHVDT----FLGEVLGAVILGGNPHLNQTYKIKSLEIISDGDISKVGQIIVN 735
+ + HV+T +L +VL G + + K+K++ I + + G+ ++
Sbjct: 228 CYAACPPLVHVETNSTYYLWDVLTTAFTGNSTLV----KVKTVSSIVYTETPRQGRTEIS 283
Query: 736 QEQGKLVKVLESLNVAVYYDHFAEVL 761
E+G+ V V+ + ++ + +++
Sbjct: 284 -EEGRPVDVVYDVTAEAFFAYITDLM 308
>gi|374985237|ref|YP_004960732.1| ribonucleoside hydrolase 1 [Streptomyces bingchenggensis BCW-1]
gi|297155889|gb|ADI05601.1| ribonucleoside hydrolase 1 [Streptomyces bingchenggensis BCW-1]
Length = 318
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 54/136 (39%), Gaps = 21/136 (15%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPH 117
V+ YGL LP R P + G IT+ TN A L +P
Sbjct: 79 VHGAYGLGGVELPAAARAAHPGHAVDWIAEQLRGAGPGEITLIATAPLTNVAALLHTHPD 138
Query: 118 LKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTV 177
++ + I VMGGA P ++ P AEFN +DP AA V
Sbjct: 139 TRRLLREIVVMGGA---------------------AFAPGNTTPAAEFNFHADPEAARYV 177
Query: 178 LHSGIPVTIIPLDATK 193
SG+P+ I+ LD T+
Sbjct: 178 TESGVPLHIVGLDVTR 193
Score = 43.5 bits (101), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 10/102 (9%)
Query: 547 AVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEKG 605
AVD + PG +IT++ PLTN+A ++ ++ +++++ ++GG G
Sbjct: 102 AVDWIAEQLRGAGPG-EITLIATAPLTNVAALLHTHPDTRRLLREIVVMGGAA---FAPG 157
Query: 606 NVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
N T P+ AEFN DP AA+ V ES + + ++ L + R+
Sbjct: 158 N--TTPA---AEFNFHADPEAARYVTESGVPLHIVGLDVTRK 194
>gi|293368398|ref|ZP_06615023.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis M23864:W2(grey)]
gi|417657027|ref|ZP_12306701.1| Inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis VCU028]
gi|417658779|ref|ZP_12308399.1| Inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis VCU045]
gi|417908425|ref|ZP_12552183.1| Inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis VCU037]
gi|418612841|ref|ZP_13175864.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis VCU117]
gi|418617785|ref|ZP_13180674.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis VCU120]
gi|418626142|ref|ZP_13188767.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis VCU126]
gi|418665729|ref|ZP_13227169.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis VCU081]
gi|420183578|ref|ZP_14689706.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIHLM049]
gi|420194628|ref|ZP_14700433.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIHLM021]
gi|420207180|ref|ZP_14712672.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIHLM008]
gi|420214754|ref|ZP_14720030.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIH05005]
gi|420217073|ref|ZP_14722260.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIH05001]
gi|420223397|ref|ZP_14728294.1| Inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis NIH08001]
gi|420223951|ref|ZP_14728812.1| Inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis NIH06004]
gi|420230017|ref|ZP_14734717.1| Inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis NIH04003]
gi|420235124|ref|ZP_14739675.1| Inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis NIH051475]
gi|291317473|gb|EFE57894.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis M23864:W2(grey)]
gi|329735405|gb|EGG71696.1| Inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis VCU028]
gi|329737073|gb|EGG73328.1| Inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis VCU045]
gi|341656302|gb|EGS80022.1| Inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis VCU037]
gi|374408139|gb|EHQ78974.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis VCU081]
gi|374817572|gb|EHR81751.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis VCU117]
gi|374817669|gb|EHR81847.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis VCU120]
gi|374833698|gb|EHR97371.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis VCU126]
gi|394248752|gb|EJD93983.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIHLM049]
gi|394264163|gb|EJE08860.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIHLM021]
gi|394275654|gb|EJE20027.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIHLM008]
gi|394283146|gb|EJE27323.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIH05005]
gi|394287420|gb|EJE31380.1| Inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis NIH08001]
gi|394290844|gb|EJE34690.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIH05001]
gi|394296819|gb|EJE40436.1| Inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis NIH06004]
gi|394298489|gb|EJE42059.1| Inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis NIH04003]
gi|394303559|gb|EJE46978.1| Inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis NIH051475]
Length = 313
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 96/198 (48%), Gaps = 10/198 (5%)
Query: 563 KITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFL 622
K+T+L GPLT+LA+ I NS +++++ + G +KGNV AE+N F
Sbjct: 120 KVTLLFTGPLTDLAKAIKYDNS--ILKNIEKLVWMGGTFLDKGNVEEPEHDGTAEWNAFW 177
Query: 623 DPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQ 682
DP A K V +S + + ++ L +V ++ D+++ F L +
Sbjct: 178 DPEAVKVVLDSDMIVDIVALESTNQVPLTMEVRQMWADKRQYLGVDF---LGTSYAAVPP 234
Query: 683 SHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLV 742
H + FL +VL + G+P+L ++ K+K ++++S G G+ E G+ V
Sbjct: 235 LTHFVTNSTYFLWDVLTTAYV-GSPNLVESTKLK-IDVVSQG--PSQGRTF-QSENGREV 289
Query: 743 KVLESLNVAVYYDHFAEV 760
+V+ +N ++ + ++
Sbjct: 290 QVITDVNKQAFFKYITDL 307
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 28/151 (18%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
+T+ G T+ A + + + KNIE + MGG GN+
Sbjct: 121 VTLLFTGPLTDLAKAIKYDNSILKNIEKLVWMGGTFLDK----------------GNVEE 164
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQY 216
+ + AE+N F DP A VL S + V I+ L++T +P++ E RQ + +
Sbjct: 165 PEHDGTAEWNAFWDPEAVKVVLDSDMIVDIVALESTNQVPLT------MEVRQ-MWADKR 217
Query: 217 CFQSLKMIRDTWSGSPPF-----HEAYCMWD 242
+ + + +++ PP + Y +WD
Sbjct: 218 QYLGVDFLGTSYAAVPPLTHFVTNSTYFLWD 248
>gi|262044931|ref|ZP_06017973.1| cytidine/uridine-specific hydrolase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259037658|gb|EEW38887.1| cytidine/uridine-specific hydrolase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 304
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 70/135 (51%), Gaps = 16/135 (11%)
Query: 543 RQPLAVDVWKSIVESIEPGSK-ITILTNGPLTNLAQIIGLQNSSSV--IQDVYIVGGNKG 599
RQPLA +++I +++ ++ IT++ GPLTN+A ++ Q V I+ + I+GG+ G
Sbjct: 96 RQPLAKPAFQAIRDALMHAAEPITLVAIGPLTNIALLLT-QYPECVFNIRRLVIMGGSAG 154
Query: 600 QDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR---VASFFKILH 656
+ N N AEFN+ +DP AA VF S LEI + L + R A + L
Sbjct: 155 RGNFTPN---------AEFNIAIDPEAAAKVFHSGLEIVMCGLDVTNRALLAADYLATLP 205
Query: 657 KLRDRKKTPESVFSQ 671
L K ++FS
Sbjct: 206 TLNQTGKMLHALFSH 220
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 60/137 (43%), Gaps = 27/137 (19%)
Query: 80 RQPTAQ---QVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
RQP A+ Q + +A+ +A PIT+ +G TN A+ L P NI + +MGG+
Sbjct: 96 RQPLAKPAFQAIRDALMHAAEPITLVAIGPLTNIALLLTQYPECVFNIRRLVIMGGSAGR 155
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKT 194
GN P+ AEFNI DP AA V HSG+ + + LD T
Sbjct: 156 -----------------GNFTPN-----AEFNIAIDPEAAAKVFHSGLEIVMCGLDVTNR 193
Query: 195 IPVSENFFVEFERRQNT 211
++ ++ T
Sbjct: 194 ALLAADYLATLPTLNQT 210
>gi|358052236|ref|ZP_09146159.1| ribonucleoside hydrolase RihC [Staphylococcus simiae CCM 7213]
gi|357258340|gb|EHJ08474.1| ribonucleoside hydrolase RihC [Staphylococcus simiae CCM 7213]
Length = 302
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 56/124 (45%), Gaps = 22/124 (17%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
S PIT+ +G TN A+ L P +K I+ + +MGG+ G
Sbjct: 115 SKEPITIVAIGPLTNIALLLTTYPEVKPFIKEVVLMGGS-----------------SGRG 157
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTY 212
N+ P AEFNI+ DP AA+ V +SG+ +T+I LD + +F F+ T
Sbjct: 158 NI-----TPLAEFNIYCDPEAAHIVFNSGLKLTMIGLDLAREATFDHSFLENFKHLNKTS 212
Query: 213 EAQY 216
Y
Sbjct: 213 NMLY 216
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 64/125 (51%), Gaps = 14/125 (11%)
Query: 547 AVDVWKSIVE-SIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEK 604
A+ KS +E S EP ITI+ GPLTN+A ++ I++V ++GG+ G +
Sbjct: 104 AITAIKSTLENSKEP---ITIVAIGPLTNIALLLTTYPEVKPFIKEVVLMGGSSG----R 156
Query: 605 GNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKT 664
GN+ + AEFN++ DP AA VF S L++ +I L + R L + KT
Sbjct: 157 GNI-----TPLAEFNIYCDPEAAHIVFNSGLKLTMIGLDLAREATFDHSFLENFKHLNKT 211
Query: 665 PESVF 669
++
Sbjct: 212 SNMLY 216
>gi|127514784|ref|YP_001095981.1| inosine/uridine-preferring nucleoside hydrolase [Shewanella loihica
PV-4]
gi|126640079|gb|ABO25722.1| Inosine/uridine-preferring nucleoside hydrolase [Shewanella loihica
PV-4]
Length = 322
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 72/122 (59%), Gaps = 17/122 (13%)
Query: 551 WKSIVESI--EPGSKITILTNGPLTNLAQIIGLQNSSSV---IQDVYIVGGNKGQDNEKG 605
++ I++S+ +PG +IT++ GPLTNLA + LQ + + +++V ++GG G + +G
Sbjct: 106 YQYIIDSVRAQPG-EITLVAVGPLTNLA--LALQAAPDIVDLVREVVVMGGAFGVNGHRG 162
Query: 606 NVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFF--KILHKLRDRKK 663
NV + YAE N+ DP AA VF ++ + +I L + ++ SFF + L +LRD
Sbjct: 163 NV-----TPYAEANIHDDPHAADLVFTARWPVTIIGLDVTQQ--SFFTREYLDELRDAAG 215
Query: 664 TP 665
P
Sbjct: 216 EP 217
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 20/112 (17%)
Query: 84 AQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTN 141
A Q +I+++ A P IT+ +G TN A+ L P + + + VMGGA N
Sbjct: 105 AYQYIIDSVRAQPGEITLVAVGPLTNLALALQAAPDIVDLVREVVVMGGAF------GVN 158
Query: 142 SSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
+ GN+ PYAE NI DP AA V + PVTII LD T+
Sbjct: 159 GHR-------GNV-----TPYAEANIHDDPHAADLVFTARWPVTIIGLDVTQ 198
>gi|56697321|ref|YP_167687.1| inosine-uridine preferring nucleoside hydrolase [Ruegeria pomeroyi
DSS-3]
gi|56679058|gb|AAV95724.1| inosine-uridine preferring nucleoside hydrolase [Ruegeria pomeroyi
DSS-3]
Length = 313
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 67/149 (44%), Gaps = 31/149 (20%)
Query: 51 PVGQRL----YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISA---GPITVFVMG 103
P+ ++L +V+ GL LP PL++ A +I+ + A G +T+ +G
Sbjct: 72 PIARKLVTAEHVHGKTGLDGPDLPD---PVMPLQEAHAVDFIIDTLRAHAPGTVTLCPLG 128
Query: 104 SHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYA 163
TN A P + ++ I +MGGA +GN+ P A
Sbjct: 129 PLTNIATAFTRAPDIVSRVQEIVLMGGAYFE----------------VGNI-----TPAA 167
Query: 164 EFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
EFNI+ DP AA V SG P+ ++PLD T
Sbjct: 168 EFNIYVDPEAADIVFKSGAPIVVMPLDVT 196
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 17/118 (14%)
Query: 538 DDPELRQPL-------AVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQ 589
D P+L P+ AVD + + PG+ +T+ GPLTN+A + S +Q
Sbjct: 90 DGPDLPDPVMPLQEAHAVDFIIDTLRAHAPGT-VTLCPLGPLTNIATAFTRAPDIVSRVQ 148
Query: 590 DVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
++ ++GG E GN+ + AEFN+++DP AA VF+S I ++PL + +
Sbjct: 149 EIVLMGGAY---FEVGNI-----TPAAEFNIYVDPEAADIVFKSGAPIVVMPLDVTHK 198
>gi|385811889|ref|YP_005848280.1| nucleoside hydrolase [Lactobacillus fermentum CECT 5716]
gi|299782788|gb|ADJ40786.1| Nucleoside hydrolase [Lactobacillus fermentum CECT 5716]
Length = 312
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 101/233 (43%), Gaps = 46/233 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL A LP+ G + P P A +++ + S +T+ V G TN A+FL
Sbjct: 81 VHGETGLDGADLPEPG--FLPQSLP-AIELMARVLQESTEKVTLVVTGPMTNAALFLRTC 137
Query: 116 PHL-KKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAA 174
P L ++ I+ I MGGA+ +GN P EFNIF DP AA
Sbjct: 138 PDLAREKIDQIVFMGGAM-----------------GLGNW-----QPSVEFNIFVDPEAA 175
Query: 175 YTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSP-- 232
VL+ G+P+ ++PL+ T +++ E + N F L + + P
Sbjct: 176 KIVLNFGLPLVMVPLNVTHQAQITKPEIDEIAQLDN--PVAQAFVGLLNFFERYHEDPKW 233
Query: 233 -----PFHE----AYCMWDSFMAGVALSIMLNSSSH--NGENACSEMEYMNLT 274
P H+ A+ + + GV +++ + ++ GE C +Y +LT
Sbjct: 234 GFVGAPLHDPCTIAWLINPALFDGVDVNVDVETTGELTRGETVC---DYYHLT 283
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 95/245 (38%), Gaps = 52/245 (21%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M K ++ D D D LA+ + P I+L + S+ T++ +L ++ R
Sbjct: 1 MVKKIILDCDPGHDDALAMTLAVANPA--IDLVAVTTSAGNQTPDKTLNNALRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV G + + P + G L GFL + LP
Sbjct: 59 PDIPVAAGAQVPLVKPLETAPEVHGETGLDGADLPEPGFL--------PQSLP------- 103
Query: 525 AENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGL--Q 582
A+++ +++ E K+T++ GP+TN A +
Sbjct: 104 ----------------------AIELMARVLQ--ESTEKVTLVVTGPMTNAALFLRTCPD 139
Query: 583 NSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+ I + +GG G N + +V EFN+F+DP AAK V L + ++PL
Sbjct: 140 LAREKIDQIVFMGGAMGLGNWQPSV---------EFNIFVDPEAAKIVLNFGLPLVMVPL 190
Query: 643 HMQRR 647
++ +
Sbjct: 191 NVTHQ 195
>gi|420185812|ref|ZP_14691889.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIHLM040]
gi|394253166|gb|EJD98179.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIHLM040]
Length = 313
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 96/198 (48%), Gaps = 10/198 (5%)
Query: 563 KITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFL 622
K+T+L GPLT+LA+ I NS +++++ + G +KGNV AE+N F
Sbjct: 120 KVTLLFTGPLTDLAKAIKYDNS--ILKNIEKLVWMGGTFLDKGNVEEPEHDGTAEWNAFW 177
Query: 623 DPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQ 682
DP A K V +S + + ++ L +V ++ D+++ F L +
Sbjct: 178 DPEAVKVVLDSDMIVDIVALESTNQVPLTMEVRQMWADKRQYLGIDF---LGTSYAAVPP 234
Query: 683 SHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLV 742
H + FL +VL + G+P+L ++ K+K ++++S G G+ E G+ V
Sbjct: 235 LTHFVTNSTYFLWDVLTTAYV-GSPNLVESTKLK-IDVVSQG--PSQGRTF-QSENGREV 289
Query: 743 KVLESLNVAVYYDHFAEV 760
+V+ +N ++ + ++
Sbjct: 290 QVITDVNKQAFFKYITDL 307
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 28/151 (18%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
+T+ G T+ A + + + KNIE + MGG GN+
Sbjct: 121 VTLLFTGPLTDLAKAIKYDNSILKNIEKLVWMGGTFLDK----------------GNVEE 164
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQY 216
+ + AE+N F DP A VL S + V I+ L++T +P++ E RQ + +
Sbjct: 165 PEHDGTAEWNAFWDPEAVKVVLDSDMIVDIVALESTNQVPLT------MEVRQ-MWADKR 217
Query: 217 CFQSLKMIRDTWSGSPPF-----HEAYCMWD 242
+ + + +++ PP + Y +WD
Sbjct: 218 QYLGIDFLGTSYAAVPPLTHFVTNSTYFLWD 248
>gi|295692747|ref|YP_003601357.1| inosine-uridine preferring nucleoside hydrolase [Lactobacillus
crispatus ST1]
gi|312978267|ref|ZP_07790010.1| purine nucleosidase [Lactobacillus crispatus CTV-05]
gi|423317746|ref|ZP_17295643.1| hypothetical protein HMPREF9250_01351 [Lactobacillus crispatus
FB049-03]
gi|423321082|ref|ZP_17298954.1| hypothetical protein HMPREF9249_00954 [Lactobacillus crispatus
FB077-07]
gi|295030853|emb|CBL50332.1| Inosine-uridine preferring nucleoside hydrolase [Lactobacillus
crispatus ST1]
gi|310894786|gb|EFQ43857.1| purine nucleosidase [Lactobacillus crispatus CTV-05]
gi|405596779|gb|EKB70111.1| hypothetical protein HMPREF9249_00954 [Lactobacillus crispatus
FB077-07]
gi|405597941|gb|EKB71187.1| hypothetical protein HMPREF9250_01351 [Lactobacillus crispatus
FB049-03]
Length = 308
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 78/157 (49%), Gaps = 26/157 (16%)
Query: 96 PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY 155
PI + + G T+ A L +P ++KNIE +Y MGG++ D GN+
Sbjct: 121 PIALVMTGPLTDLARALDVDPDIEKNIEKLYWMGGSL----------------DGHGNVA 164
Query: 156 PDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQ 215
+++ E+N F DP+A V S IP+ ++ L++T+ +P+++ E RQ+ + +
Sbjct: 165 MVNADGSQEWNSFWDPYAVKRVFESNIPIQMVGLESTEELPLND------ELRQH-WASL 217
Query: 216 YCFQSLKMIRDTWS--GSPPFHEAYCMWDSFMAGVAL 250
+ ++ +I +S S P E Y +WD AL
Sbjct: 218 RKYPAMDLIGQGYSLIVSIPSAELY-LWDVLTTISAL 253
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 538 DDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGG 596
D + + P +D+ + I E+ EP I ++ GPLT+LA+ + + + I+ +Y +GG
Sbjct: 99 DTQQAKLPAHLDMVEKIKEADEP---IALVMTGPLTDLARALDVDPDIEKNIEKLYWMGG 155
Query: 597 NKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLH 643
+ + GNV V + E+N F DP A K VFES + I+++ L
Sbjct: 156 SL---DGHGNVAMVNADGSQEWNSFWDPYAVKRVFESNIPIQMVGLE 199
>gi|421865057|ref|ZP_16296741.1| Inosine-uridine preferring nucleoside hydrolase [Burkholderia
cenocepacia H111]
gi|358074943|emb|CCE47619.1| Inosine-uridine preferring nucleoside hydrolase [Burkholderia
cenocepacia H111]
Length = 350
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 59/133 (44%), Gaps = 24/133 (18%)
Query: 77 APLRQPTAQQVLINAIS-AGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIR 133
APL A L++ +S A P +T+ +G TN A L+ P ++ + I +MGGA
Sbjct: 135 APLAAGHAVSYLVDTLSRAAPNSVTLCALGPLTNIATALVEAPQVRAALRDIVLMGGAF- 193
Query: 134 SDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
F N + P AEFNI+ DP AA V SG+P+ ++P D
Sbjct: 194 ---FERGNIT-----------------PAAEFNIYVDPQAADVVFGSGVPIVVLPRDVAV 233
Query: 194 TIPVSENFFVEFE 206
P++ F
Sbjct: 234 KAPITPARVAPFR 246
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 47/81 (58%), Gaps = 9/81 (11%)
Query: 562 SKITILTNGPLTNLAQ-IIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNM 620
+ +T+ GPLTN+A ++ + ++D+ ++GG E+GN+ + AEFN+
Sbjct: 156 NSVTLCALGPLTNIATALVEAPQVRAALRDIVLMGG---AFFERGNI-----TPAAEFNI 207
Query: 621 FLDPLAAKAVFESKLEIKLIP 641
++DP AA VF S + I ++P
Sbjct: 208 YVDPQAADVVFGSGVPIVVLP 228
>gi|386033081|ref|YP_005952994.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae KCTC 2242]
gi|424828881|ref|ZP_18253609.1| nonspecific ribonucleoside hydrolase RihC [Klebsiella pneumoniae
subsp. pneumoniae Ecl8]
gi|339760209|gb|AEJ96429.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae KCTC 2242]
gi|414706297|emb|CCN28001.1| nonspecific ribonucleoside hydrolase RihC [Klebsiella pneumoniae
subsp. pneumoniae Ecl8]
Length = 304
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 70/135 (51%), Gaps = 16/135 (11%)
Query: 543 RQPLAVDVWKSIVESIEPGSK-ITILTNGPLTNLAQIIGLQNSSSV--IQDVYIVGGNKG 599
RQPLA +++I +++ ++ IT++ GPLTN+A ++ Q V I+ + I+GG+ G
Sbjct: 96 RQPLAKPAFQAIRDALMHAAEPITLVAIGPLTNIALLLT-QYPECVFNIRRLVIMGGSAG 154
Query: 600 QDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR---VASFFKILH 656
+ N N AEFN+ +DP AA VF S LEI + L + R A + L
Sbjct: 155 RGNFTPN---------AEFNIAIDPEAAAKVFHSGLEIVMCGLDVTNRALLAADYLATLP 205
Query: 657 KLRDRKKTPESVFSQ 671
L K ++FS
Sbjct: 206 TLNQTGKMLHALFSH 220
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 60/137 (43%), Gaps = 27/137 (19%)
Query: 80 RQPTAQ---QVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
RQP A+ Q + +A+ +A PIT+ +G TN A+ L P NI + +MGG+
Sbjct: 96 RQPLAKPAFQAIRDALMHAAEPITLVAIGPLTNIALLLTQYPECVFNIRRLVIMGGSAGR 155
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKT 194
GN P+ AEFNI DP AA V HSG+ + + LD T
Sbjct: 156 -----------------GNFTPN-----AEFNIAIDPEAAAKVFHSGLEIVMCGLDVTNR 193
Query: 195 IPVSENFFVEFERRQNT 211
++ ++ T
Sbjct: 194 ALLAADYLATLPTLNQT 210
>gi|227877382|ref|ZP_03995453.1| purine nucleosidase [Lactobacillus crispatus JV-V01]
gi|256848685|ref|ZP_05554119.1| nucleoside hydrolase [Lactobacillus crispatus MV-1A-US]
gi|262045907|ref|ZP_06018871.1| nucleoside hydrolase [Lactobacillus crispatus MV-3A-US]
gi|227863050|gb|EEJ70498.1| purine nucleosidase [Lactobacillus crispatus JV-V01]
gi|256714224|gb|EEU29211.1| nucleoside hydrolase [Lactobacillus crispatus MV-1A-US]
gi|260573866|gb|EEX30422.1| nucleoside hydrolase [Lactobacillus crispatus MV-3A-US]
Length = 308
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 78/157 (49%), Gaps = 26/157 (16%)
Query: 96 PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY 155
PI + + G T+ A L +P ++KNIE +Y MGG++ D GN+
Sbjct: 121 PIALVMTGPLTDLARALDVDPDIEKNIEKLYWMGGSL----------------DGHGNVA 164
Query: 156 PDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQ 215
+++ E+N F DP+A V S IP+ ++ L++T+ +P+++ E RQ+ + +
Sbjct: 165 MVNADGSQEWNSFWDPYAVKRVFESNIPIQMVGLESTEELPLND------ELRQH-WASL 217
Query: 216 YCFQSLKMIRDTWS--GSPPFHEAYCMWDSFMAGVAL 250
+ ++ +I +S S P E Y +WD AL
Sbjct: 218 RKYPAMDLIGQGYSLIVSIPSAELY-LWDVLTTISAL 253
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 57/102 (55%), Gaps = 7/102 (6%)
Query: 543 RQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQD 601
+ P +D+ + I E+ EP I ++ GPLT+LA+ + + + I+ +Y +GG+
Sbjct: 104 KLPAHLDMVEKIKEADEP---IALVMTGPLTDLARALDVDPDIEKNIEKLYWMGGSL--- 157
Query: 602 NEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLH 643
+ GNV V + E+N F DP A K VFES + I+++ L
Sbjct: 158 DGHGNVAMVNADGSQEWNSFWDPYAVKRVFESNIPIQMVGLE 199
>gi|335046553|ref|ZP_08539576.1| pyrimidine-specific ribonucleoside hydrolase RihB family protein
[Oribacterium sp. oral taxon 108 str. F0425]
gi|363896275|ref|ZP_09322828.1| hypothetical protein HMPREF9624_01572 [Oribacterium sp. ACB7]
gi|333760339|gb|EGL37896.1| pyrimidine-specific ribonucleoside hydrolase RihB family protein
[Oribacterium sp. oral taxon 108 str. F0425]
gi|361961169|gb|EHL14392.1| hypothetical protein HMPREF9624_01572 [Oribacterium sp. ACB7]
Length = 335
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 73/169 (43%), Gaps = 29/169 (17%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
+++ G TN A+ + +P + + IYV+GGA P
Sbjct: 131 LSLVCTGPTTNLAMAIQKDPSIVPLLGEIYVLGGAFH---------------------IP 169
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVE---FERRQN--T 211
+ P +E+NIF+DP AA VL SG+PVT++PLD + +++ F+ N +
Sbjct: 170 GNITPVSEYNIFADPEAAQLVLTSGVPVTLVPLDICENNLFADSMLTRDSLFDITSNGKS 229
Query: 212 YEAQYCFQSLKMIRDTWSGSPPFH-EAYCMWDSFMAGVALSIMLNSSSH 259
+ Y + + D W FH + M D A VA+ L + S
Sbjct: 230 SVSDYILKKFPIYIDVWRSY--FHLVGFPMDDVITAAVAVEEKLCTYSE 276
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 20/147 (13%)
Query: 564 ITILTNGPLTNLAQIIGLQNSSSVIQ---DVYIVGGNKGQDNEKGNVFTVPS--SKYAEF 618
++++ GP TNLA + +Q S++ ++Y++GG F +P + +E+
Sbjct: 131 LSLVCTGPTTNLA--MAIQKDPSIVPLLGEIYVLGG----------AFHIPGNITPVSEY 178
Query: 619 NMFLDPLAAKAVFESKLEIKLIPLHM--QRRVASFFKILHKLRDRKKTPESVFSQRLLQG 676
N+F DP AA+ V S + + L+PL + A L D +S S +L+
Sbjct: 179 NIFADPEAAQLVLTSGVPVTLVPLDICENNLFADSMLTRDSLFDITSNGKSSVSDYILKK 238
Query: 677 LMTLQQSHHSYHHVDTF-LGEVLGAVI 702
SY H+ F + +V+ A +
Sbjct: 239 FPIYIDVWRSYFHLVGFPMDDVITAAV 265
>gi|449056773|ref|ZP_21735437.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae hvKP1]
gi|448875522|gb|EMB10537.1| ribonucleoside hydrolase RihC [Klebsiella pneumoniae hvKP1]
Length = 304
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 70/135 (51%), Gaps = 16/135 (11%)
Query: 543 RQPLAVDVWKSIVESIEPGSK-ITILTNGPLTNLAQIIGLQNSSSV--IQDVYIVGGNKG 599
RQPLA +++I +++ ++ IT++ GPLTN+A ++ Q V I+ + I+GG+ G
Sbjct: 96 RQPLAKPAFQAIRDALMHAAEPITLVAIGPLTNIALLLT-QYPECVFNIRRLVIMGGSAG 154
Query: 600 QDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR---VASFFKILH 656
+ N N AEFN+ +DP AA VF S LEI + L + R A + L
Sbjct: 155 RGNFTPN---------AEFNIAIDPEAAAKVFHSGLEIVMCGLDVTNRALLAADYLATLP 205
Query: 657 KLRDRKKTPESVFSQ 671
L K ++FS
Sbjct: 206 TLNQTGKMLHALFSH 220
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 60/137 (43%), Gaps = 27/137 (19%)
Query: 80 RQPTAQ---QVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
RQP A+ Q + +A+ +A PIT+ +G TN A+ L P NI + +MGG+
Sbjct: 96 RQPLAKPAFQAIRDALMHAAEPITLVAIGPLTNIALLLTQYPECVFNIRRLVIMGGSAGR 155
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKT 194
GN P+ AEFNI DP AA V HSG+ + + LD T
Sbjct: 156 -----------------GNFTPN-----AEFNIAIDPEAAAKVFHSGLEIVMCGLDVTNR 193
Query: 195 IPVSENFFVEFERRQNT 211
++ ++ T
Sbjct: 194 ALLAADYLATLPTLNQT 210
>gi|418413253|ref|ZP_12986496.1| hypothetical protein HMPREF9281_02100 [Staphylococcus epidermidis
BVS058A4]
gi|410879341|gb|EKS27191.1| hypothetical protein HMPREF9281_02100 [Staphylococcus epidermidis
BVS058A4]
Length = 313
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 96/198 (48%), Gaps = 10/198 (5%)
Query: 563 KITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFL 622
K+T+L GPLT+LA+ I NS +++++ + G +KGNV AE+N F
Sbjct: 120 KVTLLFTGPLTDLAKAIKYDNS--ILKNIEKLVWMGGTFLDKGNVEEPEHDGTAEWNAFW 177
Query: 623 DPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQ 682
DP A K V +S + + ++ L +V ++ D+++ F L +
Sbjct: 178 DPEAVKVVLDSDMIVDIVALESTNQVPLTMEVRQMWADKRQYLGVDF---LGTSYAAVPP 234
Query: 683 SHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLV 742
H + FL +VL + G+P+L ++ K+K ++++S G G+ E G+ V
Sbjct: 235 LTHFVTNSTYFLWDVLTTAYV-GSPNLVESTKLK-IDVVSQG--PSQGRTF-QSENGREV 289
Query: 743 KVLESLNVAVYYDHFAEV 760
+V+ +N ++ + ++
Sbjct: 290 QVITDVNKQAFFKYITDL 307
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 28/151 (18%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
+T+ G T+ A + + + KNIE + MGG GN+
Sbjct: 121 VTLLFTGPLTDLAKAIKYDNSILKNIEKLVWMGGTFLDK----------------GNVEE 164
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQY 216
+ + AE+N F DP A VL S + V I+ L++T +P++ E RQ + +
Sbjct: 165 PEHDGTAEWNAFWDPEAVKVVLDSDMIVDIVALESTNQVPLT------MEVRQ-MWADKR 217
Query: 217 CFQSLKMIRDTWSGSPPF-----HEAYCMWD 242
+ + + +++ PP + Y +WD
Sbjct: 218 QYLGVDFLGTSYAAVPPLTHFVTNSTYFLWD 248
>gi|418631182|ref|ZP_13193652.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis VCU128]
gi|374835950|gb|EHR99546.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
epidermidis VCU128]
Length = 313
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 96/198 (48%), Gaps = 10/198 (5%)
Query: 563 KITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFL 622
K+T+L GPLT+LA+ I NS +++++ + G +KGNV AE+N F
Sbjct: 120 KVTLLFTGPLTDLAKAINYDNS--ILKNIEKLVWMGGTFLDKGNVEEPEHDGTAEWNAFW 177
Query: 623 DPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQ 682
DP A K V +S + + ++ L +V ++ D+++ F L +
Sbjct: 178 DPEAVKVVLDSDMIVDIVALESTNQVPLTMEVRQMWADKRQYLGVDF---LGTSYAAVPP 234
Query: 683 SHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLV 742
H + FL +VL + G+P+L ++ K+K ++++S G G+ E G+ V
Sbjct: 235 LTHFVTNSTYFLWDVLTTAYV-GSPNLVESTKLK-IDVVSQG--PSQGRTF-QSENGREV 289
Query: 743 KVLESLNVAVYYDHFAEV 760
+V+ +N ++ + ++
Sbjct: 290 QVITYVNKQAFFKYITDL 307
Score = 43.5 bits (101), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 28/151 (18%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
+T+ G T+ A + + + KNIE + MGG GN+
Sbjct: 121 VTLLFTGPLTDLAKAINYDNSILKNIEKLVWMGGTFLDK----------------GNVEE 164
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQY 216
+ + AE+N F DP A VL S + V I+ L++T +P++ E RQ + +
Sbjct: 165 PEHDGTAEWNAFWDPEAVKVVLDSDMIVDIVALESTNQVPLT------MEVRQ-MWADKR 217
Query: 217 CFQSLKMIRDTWSGSPPF-----HEAYCMWD 242
+ + + +++ PP + Y +WD
Sbjct: 218 QYLGVDFLGTSYAAVPPLTHFVTNSTYFLWD 248
>gi|375101950|ref|ZP_09748213.1| Inosine-uridine nucleoside N-ribohydrolase [Saccharomonospora
cyanea NA-134]
gi|374662682|gb|EHR62560.1| Inosine-uridine nucleoside N-ribohydrolase [Saccharomonospora
cyanea NA-134]
Length = 332
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 61/141 (43%), Gaps = 28/141 (19%)
Query: 65 RKAFLPQGGRKYAPLRQPTAQQVLINAISAG--PITVFVMGSHTNFAIFLMNNPHLKKNI 122
R A LP+ R PL A +L + + P+T+ +G TN A L P L I
Sbjct: 103 RSAALPEAER---PLEPGGAVWLLSRLLESSDEPVTIAPIGPLTNIATLLSARPDLHHRI 159
Query: 123 EHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSG- 181
I VMGGA+ N+S + AEFNI+SDP AA VL G
Sbjct: 160 ARIVVMGGAL-----GHGNTSAA-----------------AEFNIWSDPEAAQRVLGGGE 197
Query: 182 IPVTIIPLDATKTIPVSENFF 202
+P ++P+D T V +
Sbjct: 198 VPCVLVPMDLTYRCAVGREWL 218
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 102/259 (39%), Gaps = 55/259 (21%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
+G ++ D D D A I L L E ++L G+ AT +L + R
Sbjct: 13 VGTKLIIDTDPGVDDAFA-IALAALS-EDVDLLGVTTVFGNVGIDATTRNARRVLALCKR 70
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
D+PV G + V+P KYA + D L G + LP
Sbjct: 71 GDVPVAEGAARPLVHVHPHV-----AKYAHGL----------DGLSGRSAALPE------ 109
Query: 525 AENSVRFGASQDNDDPELRQPLAVDVW---KSIVESIEPGSKITILTNGPLTNLAQIIGL 581
AE + G + VW + + S EP +TI GPLTN+A ++
Sbjct: 110 AERPLEPGGA---------------VWLLSRLLESSDEP---VTIAPIGPLTNIATLLSA 151
Query: 582 Q-NSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVF-ESKLEIKL 639
+ + I + ++GG G N +S AEFN++ DP AA+ V ++ L
Sbjct: 152 RPDLHHRIARIVVMGGALGHGN---------TSAAAEFNIWSDPEAAQRVLGGGEVPCVL 202
Query: 640 IPLHMQRRVASFFKILHKL 658
+P+ + R A + L L
Sbjct: 203 VPMDLTYRCAVGREWLDAL 221
>gi|24372400|ref|NP_716442.1| pyrimidine-specific ribonucleoside hydrolase RihA [Shewanella
oneidensis MR-1]
gi|81463343|sp|Q8EIM7.1|RIHA_SHEON RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA;
AltName: Full=Cytidine/uridine-specific hydrolase
gi|24346363|gb|AAN53887.1| pyrimidine-specific ribonucleoside hydrolase RihA [Shewanella
oneidensis MR-1]
Length = 318
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 47/100 (47%), Gaps = 22/100 (22%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
S P+T+ G TN A+ L ++ L IE I +MGGA +G
Sbjct: 115 SHQPVTLIPTGPLTNIALLLASHSELHDKIERIVLMGGAA-----------------GVG 157
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
N P AEFNIF DP AA V SGIP+T+ LD T
Sbjct: 158 NW-----TPAAEFNIFVDPEAADIVFKSGIPITMCGLDVT 192
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 104/261 (39%), Gaps = 61/261 (23%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M P++ D D D +ALI L P +L+ L + S+ T++ +L ++ R
Sbjct: 1 MTCPIILDCDPGHDDAIALILALAHP-DLVPL-AVTTSAGNQTPDKTLNNALRILTLLNR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV A G P LARDL
Sbjct: 59 SDIPV------AGGAAKP-----------------------------LARDL------II 77
Query: 525 AENSVRFGASQDNDDPELR----QPLAVDVWKSIVESIEPGSK-ITILTNGPLTNLAQII 579
A+N D P L P A+ + + + I + +T++ GPLTN+A ++
Sbjct: 78 ADN---VHGETGLDGPALPNPSFSPQAITAVELMAQQIRKSHQPVTLIPTGPLTNIALLL 134
Query: 580 GLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIK 638
+ I+ + ++GG G N + AEFN+F+DP AA VF+S + I
Sbjct: 135 ASHSELHDKIERIVLMGGAAGVGNW---------TPAAEFNIFVDPEAADIVFKSGIPIT 185
Query: 639 LIPLHMQRRVASFFKILHKLR 659
+ L + + + + ++R
Sbjct: 186 MCGLDVTHQAQIMDEDIERIR 206
>gi|330009334|ref|ZP_08306511.1| cytidine/uridine-specific hydrolase, partial [Klebsiella sp. MS
92-3]
gi|328534832|gb|EGF61377.1| cytidine/uridine-specific hydrolase [Klebsiella sp. MS 92-3]
Length = 289
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 70/135 (51%), Gaps = 16/135 (11%)
Query: 543 RQPLAVDVWKSIVESIEPGSK-ITILTNGPLTNLAQIIGLQNSSSV--IQDVYIVGGNKG 599
RQPLA +++I +++ ++ IT++ GPLTN+A ++ Q V I+ + I+GG+ G
Sbjct: 81 RQPLAKPAFQAIRDALMHAAEPITLVAIGPLTNIALLLT-QYPECVFNIRRLVIMGGSAG 139
Query: 600 QDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR---VASFFKILH 656
+ N N AEFN+ +DP AA VF S LEI + L + R A + L
Sbjct: 140 RGNFTPN---------AEFNIAIDPEAAAKVFHSGLEIVMCGLDVTNRALLAADYLATLP 190
Query: 657 KLRDRKKTPESVFSQ 671
L K ++FS
Sbjct: 191 TLNQTGKMLHALFSH 205
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 60/137 (43%), Gaps = 27/137 (19%)
Query: 80 RQPTAQ---QVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
RQP A+ Q + +A+ +A PIT+ +G TN A+ L P NI + +MGG+
Sbjct: 81 RQPLAKPAFQAIRDALMHAAEPITLVAIGPLTNIALLLTQYPECVFNIRRLVIMGGSAGR 140
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKT 194
GN P+ AEFNI DP AA V HSG+ + + LD T
Sbjct: 141 -----------------GNFTPN-----AEFNIAIDPEAAAKVFHSGLEIVMCGLDVTNR 178
Query: 195 IPVSENFFVEFERRQNT 211
++ ++ T
Sbjct: 179 ALLAADYLATLPTLNQT 195
>gi|335356566|ref|ZP_08548436.1| ribonucleoside hydrolase RihC [Lactobacillus animalis KCTC 3501]
Length = 305
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 31/121 (25%)
Query: 81 QPTAQQVLINAI---------SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGA 131
+PT++ + ++A+ S PIT+ G++TN A+ L P +K I+ I MGG+
Sbjct: 93 EPTSKPLALHAVQALRETLMNSTEPITLITTGAYTNIALLLREYPEVKSKIKQIIAMGGS 152
Query: 132 IRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDA 191
+ GN+ AEFNIF+DP AA + +S +P+ ++ LD
Sbjct: 153 LGR-----------------GNM-----TSAAEFNIFTDPHAAQIMYNSQLPIVMVGLDV 190
Query: 192 T 192
T
Sbjct: 191 T 191
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 62/108 (57%), Gaps = 12/108 (11%)
Query: 538 DDPE-LRQPLAVDVWKSIVESIEPGSK-ITILTNGPLTNLAQII-GLQNSSSVIQDVYIV 594
D PE +PLA+ +++ E++ ++ IT++T G TN+A ++ S I+ + +
Sbjct: 90 DFPEPTSKPLALHAVQALRETLMNSTEPITLITTGAYTNIALLLREYPEVKSKIKQIIAM 149
Query: 595 GGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
GG+ G +GN+ + AEFN+F DP AA+ ++ S+L I ++ L
Sbjct: 150 GGSLG----RGNM-----TSAAEFNIFTDPHAAQIMYNSQLPIVMVGL 188
>gi|365142523|ref|ZP_09347698.1| non-specific ribonucleoside hydrolase rihC [Klebsiella sp.
4_1_44FAA]
gi|363651548|gb|EHL90607.1| non-specific ribonucleoside hydrolase rihC [Klebsiella sp.
4_1_44FAA]
Length = 304
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 70/135 (51%), Gaps = 16/135 (11%)
Query: 543 RQPLAVDVWKSIVESIEPGSK-ITILTNGPLTNLAQIIGLQNSSSV--IQDVYIVGGNKG 599
RQPLA +++I +++ ++ IT++ GPLTN+A ++ Q V I+ + I+GG+ G
Sbjct: 96 RQPLAKPAFQAIRDALMHAAEPITLVAIGPLTNIALLLT-QYPECVFNIRRLVIMGGSAG 154
Query: 600 QDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR---VASFFKILH 656
+ N N AEFN+ +DP AA VF S LEI + L + R A + L
Sbjct: 155 RGNFTPN---------AEFNIAIDPEAAAKVFHSGLEIVMCGLDVTNRALLAADYLATLP 205
Query: 657 KLRDRKKTPESVFSQ 671
L K ++FS
Sbjct: 206 TLNQTGKMLHALFSH 220
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 60/137 (43%), Gaps = 27/137 (19%)
Query: 80 RQPTAQ---QVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
RQP A+ Q + +A+ +A PIT+ +G TN A+ L P NI + +MGG+
Sbjct: 96 RQPLAKPAFQAIRDALMHAAEPITLVAIGPLTNIALLLTQYPECVFNIRRLVIMGGSAGR 155
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKT 194
GN P+ AEFNI DP AA V HSG+ + + LD T
Sbjct: 156 -----------------GNFTPN-----AEFNIAIDPEAAAKVFHSGLEIVMCGLDVTNR 193
Query: 195 IPVSENFFVEFERRQNT 211
++ ++ T
Sbjct: 194 ALLAADYLATLPTLNQT 210
>gi|381162656|ref|ZP_09871886.1| Inosine-uridine nucleoside N-ribohydrolase [Saccharomonospora
azurea NA-128]
gi|379254561|gb|EHY88487.1| Inosine-uridine nucleoside N-ribohydrolase [Saccharomonospora
azurea NA-128]
Length = 332
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 67/151 (44%), Gaps = 30/151 (19%)
Query: 57 YVNTNYGL--RKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFL 112
YV+ GL R A LP+ R P+ + A ++L + S P+T+ +G TN A L
Sbjct: 93 YVHGVDGLSGRSAALPEPER---PVERGGAVRLLARLLEDSDDPVTIVPIGPLTNIATLL 149
Query: 113 MNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPF 172
P L I + +MGGA L +++ AEFNI+SDP
Sbjct: 150 AARPDLHHKIARVVIMGGA----------------------LLHGNTSAAAEFNIWSDPE 187
Query: 173 AAYTVLHSG-IPVTIIPLDATKTIPVSENFF 202
AA VL G +P ++P+D T V +
Sbjct: 188 AAQRVLGGGEVPCVLVPMDLTYRCAVDRAWL 218
>gi|187919629|ref|YP_001888660.1| inosine/uridine-preferring nucleoside hydrolase [Burkholderia
phytofirmans PsJN]
gi|187718067|gb|ACD19290.1| Inosine/uridine-preferring nucleoside hydrolase [Burkholderia
phytofirmans PsJN]
Length = 380
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 23/135 (17%)
Query: 70 PQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYV 127
P G + ++ +A +++++ P +T+ +G TN A+ +P + I+ I
Sbjct: 147 PDGFATHTKVQSKSAVDFIVDSVKQNPGEVTILAIGPLTNIALATRQHPEIVPLIKQIIY 206
Query: 128 MGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTII 187
MGGAI P ++ P AEFN + DP AA TVL I +I
Sbjct: 207 MGGAID---------------------VPGNTTPTAEFNWWFDPEAAKTVLRLPIKQVVI 245
Query: 188 PLDATKTIPVSENFF 202
PLD T T+ + + +
Sbjct: 246 PLDVTDTVKMDKALY 260
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 11/120 (9%)
Query: 554 IVESIE--PGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVP 611
IV+S++ PG ++TIL GPLTN+A + + ++ + + G + GN T P
Sbjct: 165 IVDSVKQNPG-EVTILAIGPLTNIA--LATRQHPEIVPLIKQIIYMGGAIDVPGN--TTP 219
Query: 612 SSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQ 671
+ AEFN + DP AAK V ++ +IPL + V K L+ T +++ +Q
Sbjct: 220 T---AEFNWWFDPEAAKTVLRLPIKQVVIPLDVTDTV-KMDKALYDRVAHDPTKQTIITQ 275
>gi|256842940|ref|ZP_05548428.1| nucleoside hydrolase [Lactobacillus crispatus 125-2-CHN]
gi|256614360|gb|EEU19561.1| nucleoside hydrolase [Lactobacillus crispatus 125-2-CHN]
Length = 308
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 78/157 (49%), Gaps = 26/157 (16%)
Query: 96 PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY 155
PI + + G T+ A L +P ++KNIE +Y MGG++ D GN+
Sbjct: 121 PIALVMTGPLTDLARALDIDPDIEKNIEKLYWMGGSL----------------DGHGNVA 164
Query: 156 PDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQ 215
+++ E+N F DP+A V S IP+ ++ L++T+ +P+++ E RQ+ + +
Sbjct: 165 MVNADGSQEWNSFWDPYAVKRVFESNIPIQMVGLESTEELPLND------ELRQH-WASL 217
Query: 216 YCFQSLKMIRDTWS--GSPPFHEAYCMWDSFMAGVAL 250
+ ++ +I +S S P E Y +WD AL
Sbjct: 218 RKYPAMDLIGQGYSLIVSIPSAELY-LWDVLTTISAL 253
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 538 DDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGG 596
D + + P +D+ + I E+ EP I ++ GPLT+LA+ + + + I+ +Y +GG
Sbjct: 99 DTQQAKLPAHLDMVEKIKEADEP---IALVMTGPLTDLARALDIDPDIEKNIEKLYWMGG 155
Query: 597 NKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLH 643
+ + GNV V + E+N F DP A K VFES + I+++ L
Sbjct: 156 SL---DGHGNVAMVNADGSQEWNSFWDPYAVKRVFESNIPIQMVGLE 199
>gi|222152886|ref|YP_002562063.1| inosine-uridine preferring nucleoside hydrolase [Streptococcus
uberis 0140J]
gi|222113699|emb|CAR41646.1| putative inosine-uridine preferring nucleoside hydrolase
[Streptococcus uberis 0140J]
Length = 302
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 49/97 (50%), Gaps = 22/97 (22%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
IT+ +G+ TN A+ L P +K +I I +MGGAI GN
Sbjct: 118 ITIVSIGAMTNLALLLAMYPEMKNHISEIVMMGGAIHG-----------------GN--- 157
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
++ AEFNI SDP AA V S IP+T+I LD T+
Sbjct: 158 --TSSIAEFNIASDPHAADLVFKSEIPLTMIGLDVTE 192
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 104/216 (48%), Gaps = 25/216 (11%)
Query: 543 RQPLAVDVWKSIVESIEPGSK-ITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQ 600
+ PL + +++ ++I SK ITI++ G +TNLA ++ + + I ++ ++GG
Sbjct: 96 QAPLDMHAVEAMRQTILKHSKDITIVSIGAMTNLALLLAMYPEMKNHISEIVMMGGAIHG 155
Query: 601 DNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRD 660
N +S AEFN+ DP AA VF+S++ + +I L + + + + K+++
Sbjct: 156 GN---------TSSIAEFNIASDPHAADLVFKSEIPLTMIGLDVTEKALLYRQAALKIKE 206
Query: 661 RKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLG-EVLGAVILGGNPHLNQTYKIKSLE 719
+ E ++ +L + H+ H +D + + P L +T ++K L
Sbjct: 207 SGQIGEMLY--QLFE--------HYGGHGLDHGMTIHDASTIAYLTQPDLFKT-EMKYLR 255
Query: 720 IISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYD 755
+I++G G II N E + + LE+ V + D
Sbjct: 256 VITEG--LATGAIITNSEYEPVPEKLETKKVCLNVD 289
>gi|148977732|ref|ZP_01814293.1| hypothetical inosine-uridine preferring nucleoside hydrolase
[Vibrionales bacterium SWAT-3]
gi|145963100|gb|EDK28369.1| hypothetical inosine-uridine preferring nucleoside hydrolase
[Vibrionales bacterium SWAT-3]
Length = 322
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 27/154 (17%)
Query: 51 PVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNF 108
PVG + V+ G P + + +P A Q +I+++ A P IT+ +G TN
Sbjct: 74 PVGATVVVHGEAGFGDVKAPSS-LDVSAVEKP-AYQFIIDSVRAEPGEITLVAVGPLTNL 131
Query: 109 AIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIF 168
A+ L +P + ++ + +MGGA + D GN+ P+AE N+
Sbjct: 132 ALALEADPGIVDLVKEVVIMGGAFG-------------ENDHRGNV-----TPFAEANVH 173
Query: 169 SDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFF 202
DP AA V + PVT+I LD T+ E+FF
Sbjct: 174 DDPHAADKVFTASWPVTVIGLDVTE-----ESFF 202
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 76/134 (56%), Gaps = 24/134 (17%)
Query: 541 ELRQPLAVDV-------WKSIVESI--EPGSKITILTNGPLTNLAQIIGLQNSSSVI--- 588
+++ P ++DV ++ I++S+ EPG +IT++ GPLTNLA + L+ ++
Sbjct: 89 DVKAPSSLDVSAVEKPAYQFIIDSVRAEPG-EITLVAVGPLTNLA--LALEADPGIVDLV 145
Query: 589 QDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
++V I+GG G+++ +GNV + +AE N+ DP AA VF + + +I L +
Sbjct: 146 KEVVIMGGAFGENDHRGNV-----TPFAEANVHDDPHAADKVFTASWPVTVIGLDVTEE- 199
Query: 649 ASFF--KILHKLRD 660
SFF + L LRD
Sbjct: 200 -SFFTAQYLDDLRD 212
>gi|420237303|ref|ZP_14741774.1| putative nucleoside hydrolase [Parascardovia denticolens IPLA
20019]
gi|391879574|gb|EIT88080.1| putative nucleoside hydrolase [Parascardovia denticolens IPLA
20019]
Length = 367
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 141/332 (42%), Gaps = 43/332 (12%)
Query: 404 LMGKPVVF-DIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMM 462
+ P +F D D LA++YL++ +L+ + G+ + + DLL +
Sbjct: 1 MTSSPRIFLSCDTGIDDALAILYLVESHADLVGVSGVFGNVPEEVATKNS---RDLLDFL 57
Query: 463 GRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPL----------GSGGFLDSD----- 507
GR++IPV G P F G + P G GF +++
Sbjct: 58 GREEIPV------YRGAARPSF--WGKTEETMDKPYQVDPGCTVFHGINGFGNAELPVRP 109
Query: 508 TLYGLARDLPRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESI-EPGSKITI 566
+ R +P + + S + + +P R + D +I++++ E G+ +T+
Sbjct: 110 SSAKDGRGIPWETSLESQQESPQNASQALRQEPRKRFRILPDAAGAIIKAVKEFGTSLTV 169
Query: 567 LTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKY---AEFNMFLD 623
L GPLT++A+ I + S+I D+ +V G V T P + Y E N+ D
Sbjct: 170 LATGPLTDVAEAI--RREPSIIPDLRLV--------LMGGVLTQPGNGYNLVTETNIIND 219
Query: 624 PLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQS 683
P AA+AVF + ++I ++ L + R + +++ TP + F ++L ++ +
Sbjct: 220 PEAAQAVFATDMDITMVGLDVTHRCLVTREQEAQVK-ALGTPLATFVGQMLDYYLSANEK 278
Query: 684 HHSYHHVDTFLGEVLGAVILGGNPHLNQTYKI 715
+ L + L A + P L +T+ I
Sbjct: 279 SDPVFLAGSPLHDPLAAAV-ALEPSLVETFPI 309
>gi|322835394|ref|YP_004215420.1| inosine/uridine-preferring nucleoside hydrolase [Rahnella sp.
Y9602]
gi|321170595|gb|ADW76293.1| Inosine/uridine-preferring nucleoside hydrolase [Rahnella sp.
Y9602]
Length = 320
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 21/97 (21%)
Query: 96 PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY 155
PIT+ V+G TN A+ L +P + + I+ I M A + +G+
Sbjct: 120 PITLCVIGPMTNIALALGMHPDVARGIKQIVTMSCAFTA----------------LGHRV 163
Query: 156 PDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
P +AEFN+++DP AA V +SG+P+ I+PLD T
Sbjct: 164 P-----WAEFNVYADPHAAEKVFNSGVPLIIMPLDMT 195
>gi|157964064|ref|YP_001504098.1| inosine/uridine-preferring nucleoside hydrolase [Shewanella
pealeana ATCC 700345]
gi|157849064|gb|ABV89563.1| Inosine/uridine-preferring nucleoside hydrolase [Shewanella
pealeana ATCC 700345]
Length = 322
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 69/154 (44%), Gaps = 27/154 (17%)
Query: 51 PVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNF 108
PVG + V+ GL P A R A Q +I+++ A P IT+ +G TN
Sbjct: 74 PVGPTIVVHGETGLGDVHAPTDLTLSADPRP--AYQYIIDSVKAEPGEITLVAVGPLTNL 131
Query: 109 AIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIF 168
A+ L P + ++ + VMGGA + D GN+ PYAE NI
Sbjct: 132 ALALEAAPEIAGLVKEVVVMGGAFGMN-------------DHRGNV-----TPYAEANIH 173
Query: 169 SDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFF 202
DP AA V + PV +I LD T+ E+FF
Sbjct: 174 DDPHAADIVFTAPWPVVVIGLDVTE-----ESFF 202
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 66/115 (57%), Gaps = 13/115 (11%)
Query: 551 WKSIVESI--EPGSKITILTNGPLTNLAQII-GLQNSSSVIQDVYIVGGNKGQDNEKGNV 607
++ I++S+ EPG +IT++ GPLTNLA + + ++++V ++GG G ++ +GNV
Sbjct: 106 YQYIIDSVKAEPG-EITLVAVGPLTNLALALEAAPEIAGLVKEVVVMGGAFGMNDHRGNV 164
Query: 608 FTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFK--ILHKLRD 660
+ YAE N+ DP AA VF + + +I L + SFF L +LRD
Sbjct: 165 -----TPYAEANIHDDPHAADIVFTAPWPVVVIGLDVTEE--SFFSKDYLDQLRD 212
>gi|384527843|ref|YP_005419075.1| inosine/uridine-preferring nucleoside hydrolase [Rahnella aquatilis
HX2]
gi|380756581|gb|AFE60971.1| inosine/uridine-preferring nucleoside hydrolase [Rahnella aquatilis
HX2]
Length = 320
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 21/97 (21%)
Query: 96 PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY 155
PIT+ V+G TN A+ L +P + + I+ I M A + +G+
Sbjct: 120 PITLCVIGPMTNIALALGMHPDVARGIKQIVTMSCAFTA----------------LGHRV 163
Query: 156 PDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
P +AEFN+++DP AA V +SG+P+ I+PLD T
Sbjct: 164 P-----WAEFNVYADPHAAEKVFNSGVPLIIMPLDMT 195
>gi|171319531|ref|ZP_02908631.1| Inosine/uridine-preferring nucleoside hydrolase [Burkholderia
ambifaria MEX-5]
gi|171095245|gb|EDT40236.1| Inosine/uridine-preferring nucleoside hydrolase [Burkholderia
ambifaria MEX-5]
Length = 350
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 58/133 (43%), Gaps = 24/133 (18%)
Query: 77 APLRQPTAQQVLINAIS-AGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIR 133
APL A L+ +S A P +T+ +G TN A L+ P ++ + I +MGGA
Sbjct: 135 APLAAGHAVSYLVETLSRAAPNSVTLCALGPLTNIATALVEAPQIRGALREIVLMGGAF- 193
Query: 134 SDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
F N + P AEFNI+ DP AA V SG+P+ ++P D
Sbjct: 194 ---FERGNIT-----------------PAAEFNIYVDPQAAEVVFGSGVPIVVLPRDVAV 233
Query: 194 TIPVSENFFVEFE 206
P++ F
Sbjct: 234 KAPITPARVAPFR 246
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 58/105 (55%), Gaps = 12/105 (11%)
Query: 541 ELRQPLAVDVWKS-IVESIEPGS--KITILTNGPLTNLAQ-IIGLQNSSSVIQDVYIVGG 596
E R PLA S +VE++ + +T+ GPLTN+A ++ ++++ ++GG
Sbjct: 132 EPRAPLAAGHAVSYLVETLSRAAPNSVTLCALGPLTNIATALVEAPQIRGALREIVLMGG 191
Query: 597 NKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIP 641
E+GN+ + AEFN+++DP AA+ VF S + I ++P
Sbjct: 192 ---AFFERGNI-----TPAAEFNIYVDPQAAEVVFGSGVPIVVLP 228
>gi|83951971|ref|ZP_00960703.1| inosine-uridine preferring nucleoside hydrolase [Roseovarius
nubinhibens ISM]
gi|83836977|gb|EAP76274.1| inosine-uridine preferring nucleoside hydrolase [Roseovarius
nubinhibens ISM]
Length = 313
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 72/163 (44%), Gaps = 31/163 (19%)
Query: 51 PVGQRL----YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI---SAGPITVFVMG 103
P+G+ L +V+ GL LP+ PL+ A +I + +G +T+ +G
Sbjct: 72 PLGRALVTAEHVHGKTGLDGPDLPE---PTMPLQDAHAVDHIIACLREHDSGTVTLCPLG 128
Query: 104 SHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYA 163
TN A L P + I I +MGGA + +GN+ P A
Sbjct: 129 PLTNIATALQKAPDIAPRIRRIVLMGGAYFA----------------VGNV-----TPAA 167
Query: 164 EFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFE 206
EFNI DP AA VL SG+ +T+ PLD T V+E+ F
Sbjct: 168 EFNIHVDPQAAGIVLKSGVDITMAPLDLTHKALVTESRNAAFR 210
>gi|428317782|ref|YP_007115664.1| Inosine/uridine-preferring nucleoside hydrolase [Oscillatoria
nigro-viridis PCC 7112]
gi|428241462|gb|AFZ07248.1| Inosine/uridine-preferring nucleoside hydrolase [Oscillatoria
nigro-viridis PCC 7112]
Length = 307
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 62/142 (43%), Gaps = 21/142 (14%)
Query: 65 RKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNI 122
R L + G PL Q ++ + +A P+T+ V G T A L P ++ I
Sbjct: 88 RLPILNEKGTIDTPLISEPGQNFMVRVLQDAAAPVTLMVTGPLTTVAQALDIAPEIESKI 147
Query: 123 EHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPD---DSNPYAEFNIFSDPFAAYTVLH 179
+ I MGGA+ + IGN+ D + AE+N + DP A +
Sbjct: 148 QEIVWMGGAL----------------NVIGNVSKDMEPGQDMSAEWNAYWDPIAIERIWQ 191
Query: 180 SGIPVTIIPLDATKTIPVSENF 201
+ IPV + PLD T +P++ F
Sbjct: 192 TQIPVVMCPLDITNNVPLTVEF 213
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/360 (20%), Positives = 154/360 (42%), Gaps = 67/360 (18%)
Query: 407 KPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDD 466
K V+ D D + D+L+++ L+ + E + G++V+ V +L +MGR +
Sbjct: 4 KLVLMDHDGAVDDYLSVVLLMTM--EEVETLGVIVTPADCYIQPAVSATRKILDLMGRSE 61
Query: 467 IPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAE 526
+PV V + NP FP + RD + +
Sbjct: 62 VPVAASTVRGL---NP-FPVL------------------------FRRD------SFAVD 87
Query: 527 NSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ-NSS 585
D P + +P + + + ++ P +T++ GPLT +AQ + +
Sbjct: 88 RLPILNEKGTIDTPLISEPGQNFMVRVLQDAAAP---VTLMVTGPLTTVAQALDIAPEIE 144
Query: 586 SVIQDVYIVGG------NKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKL 639
S IQ++ +GG N +D E G + AE+N + DP+A + ++++++ + +
Sbjct: 145 SKIQEIVWMGGALNVIGNVSKDMEPGQDMS------AEWNAYWDPIAIERIWQTQIPVVM 198
Query: 640 IPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLG 699
PL + V + + L +++ P S + Q + D + ++L
Sbjct: 199 CPLDITNNVPLTVEFSNLLAKQRQYPISDLA----------GQCYALAISQDYYFWDILA 248
Query: 700 AVILGGNPHLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAE 759
L +P Q + ++ EII++G +S+ G+ V + G+ ++ ++ ++ A +Y++ E
Sbjct: 249 TAYL-AHPEFYQLREWET-EIITEG-LSQ-GRTKV-KSGGRKIQAMDKVDTAKFYNYILE 303
>gi|90410437|ref|ZP_01218453.1| putstive inosine-uridine preferring nucleoside hydrolase family
protein [Photobacterium profundum 3TCK]
gi|90328678|gb|EAS44962.1| putstive inosine-uridine preferring nucleoside hydrolase family
protein [Photobacterium profundum 3TCK]
Length = 310
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 118/278 (42%), Gaps = 58/278 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M +P++ D D D +ALI P +++K + S+ T+ +L ++GR
Sbjct: 1 MSRPIIIDCDPGHDDAIALILACASPE--LDIKAVTTSAGNQTPEKTLHNALRILTLVGR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYG-LARDLPRSPRRY 523
DIPV A G + P S + +D ++G D P P
Sbjct: 59 TDIPV------AGGALQPL----------------SRELIIADNVHGETGLDGPVLP--- 93
Query: 524 TAENSVRFGASQDNDDPELRQPL-AVDVWKSIV-ESIEPGSKITILTNGPLTNLAQIIGL 581
+ DP QP AV++ I+ E+ EP +T++ GPLTN+A ++
Sbjct: 94 -----------EPAFDP---QPCHAVELMAKILKEATEP---VTLVPTGPLTNIALLLAT 136
Query: 582 QNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLI 640
S I + ++GG E GN + AEFN+++DP AA VF+S + I +
Sbjct: 137 HRELHSQIDSIVLMGGAA----EVGN-----WTPAAEFNIYVDPEAADIVFKSGIPIAMC 187
Query: 641 PLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLM 678
L + R + + ++R + P + + LL M
Sbjct: 188 GLDVTHRAQIMDEDIERIR-KINNPVAQVTAELLDFFM 224
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 74/178 (41%), Gaps = 34/178 (19%)
Query: 51 PVGQRLYVNTNY----GLRKAFLPQGGRKYAPLRQPTAQQVLINAI---SAGPITVFVMG 103
P+ + L + N GL LP+ + P QP L+ I + P+T+ G
Sbjct: 70 PLSRELIIADNVHGETGLDGPVLPEPA--FDP--QPCHAVELMAKILKEATEPVTLVPTG 125
Query: 104 SHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYA 163
TN A+ L + L I+ I +MGGA +GN P A
Sbjct: 126 PLTNIALLLATHRELHSQIDSIVLMGGAAE-----------------VGNW-----TPAA 163
Query: 164 EFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSL 221
EFNI+ DP AA V SGIP+ + LD T + + +E R+ N AQ + L
Sbjct: 164 EFNIYVDPEAADIVFKSGIPIAMCGLDVTHRAQIMDE-DIERIRKINNPVAQVTAELL 220
>gi|420204005|ref|ZP_14709565.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIHLM015]
gi|394274019|gb|EJE18444.1| putative cytidine/uridine-specific hydrolase [Staphylococcus
epidermidis NIHLM015]
Length = 302
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 37/186 (19%)
Query: 85 QQVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQ 144
+ +L+N + P+T+ +G TN AI L + ++ I+ I +MGG+
Sbjct: 109 KNLLVN--TQEPLTLIAIGPLTNIAILLTSYLEVQPFIKEIVLMGGSTGR---------- 156
Query: 145 SEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVE 204
GN+ P AEFNI+ DP AA V +SG+P+T+I LD + + +F +
Sbjct: 157 -------GNV-----TPLAEFNIYCDPEAAQIVFNSGLPLTMIGLDLAREALFTHHFVKD 204
Query: 205 FERRQNTYEAQY-CFQSLKMIRDTWSGSPPFHEAYCMWDSFMAGVALSIMLNSSSHNGEN 263
F+ T Y FQ K S F + ++D F + +L+ + N +
Sbjct: 205 FKDTNATSSMLYNLFQHYK--------SEDFDIGFKLYDVF----TILYLLDPEAFNVKE 252
Query: 264 ACSEME 269
A +++E
Sbjct: 253 AYTQIE 258
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 15/138 (10%)
Query: 535 QDNDDPELRQPLAVDVWKSI-VESIEPGSKITILTNGPLTNLAQII-GLQNSSSVIQDVY 592
Q N D +L AV+ K++ V + EP +T++ GPLTN+A ++ I+++
Sbjct: 93 QINQD-DLTSIHAVEAMKNLLVNTQEP---LTLIAIGPLTNIAILLTSYLEVQPFIKEIV 148
Query: 593 IVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFF 652
++GG+ G +GNV + AEFN++ DP AA+ VF S L + +I L + R
Sbjct: 149 LMGGSTG----RGNV-----TPLAEFNIYCDPEAAQIVFNSGLPLTMIGLDLAREALFTH 199
Query: 653 KILHKLRDRKKTPESVFS 670
+ +D T +++
Sbjct: 200 HFVKDFKDTNATSSMLYN 217
>gi|374605929|ref|ZP_09678836.1| inosine/uridine-preferring nucleoside hydrolase [Paenibacillus
dendritiformis C454]
gi|374388460|gb|EHQ59875.1| inosine/uridine-preferring nucleoside hydrolase [Paenibacillus
dendritiformis C454]
Length = 316
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 77/182 (42%), Gaps = 30/182 (16%)
Query: 68 FLPQGGRKYAPLRQPTAQQVLINAISA--GPITVFVMGSHTNFAIFLMNNPHLKKNIEHI 125
L + G+ P+ A +I+ + A G T+ G T+ A L +P +++ +E +
Sbjct: 90 LLNEFGKVVTPVADKPAHLHIIDTLRATEGKTTLLFTGPLTDLARALDIDPTIEEKVERL 149
Query: 126 YVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVT 185
MGG R GN++ + + AE+N+F DP AA V SGI +
Sbjct: 150 VWMGGTFRE----------------AGNVHEPEHDGTAEWNVFWDPDAAARVWDSGIEID 193
Query: 186 IIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPF-----HEAYCM 240
++ L++T +P++ + + + + Q M+ PP + Y +
Sbjct: 194 LVALESTNQVPLTLDVRERWAAERKHIGVDFLGQCYAMV-------PPLVHFSTNSTYYL 246
Query: 241 WD 242
WD
Sbjct: 247 WD 248
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 92/199 (46%), Gaps = 12/199 (6%)
Query: 563 KITILTNGPLTNLAQIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMF 621
K T+L GPLT+LA+ + + + ++ + +GG E GNV AE+N+F
Sbjct: 120 KTTLLFTGPLTDLARALDIDPTIEEKVERLVWMGGTF---REAGNVHEPEHDGTAEWNVF 176
Query: 622 LDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQ 681
DP AA V++S +EI L+ L +V + + +K F L Q +
Sbjct: 177 WDPDAAARVWDSGIEIDLVALESTNQVPLTLDVRERWAAERKHIGVDF---LGQCYAMVP 233
Query: 682 QSHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKL 741
H + +L +VL +G + L + I S+ +I++G + G+ V G+
Sbjct: 234 PLVHFSTNSTYYLWDVLTTAFVGKS-DLVKVQTINSI-VITEG--ASQGR-TVETADGRP 288
Query: 742 VKVLESLNVAVYYDHFAEV 760
V V+ +N ++D+ E+
Sbjct: 289 VHVVYDVNRDAFFDYITEL 307
>gi|66802776|ref|XP_635242.1| hypothetical protein DDB_G0291478 [Dictyostelium discoideum AX4]
gi|60463538|gb|EAL61723.1| hypothetical protein DDB_G0291478 [Dictyostelium discoideum AX4]
Length = 420
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 25/155 (16%)
Query: 96 PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY 155
PI + G T+ AI L P++ NIE + MGG I D+ N++
Sbjct: 204 PIEILSAGPATDLAILLTLYPNVVDNIELVSQMGGTI----------------DAPANIF 247
Query: 156 PDDSNPYAEFNIFSDPFAAYTVLHSGI--PVTIIPLDATKTIPVSENFFVEFERRQNTYE 213
+N AEFN+F D A+ ++ S + + + PLDAT T P++++FF + TY
Sbjct: 248 TYRNNTVAEFNLFVD-IKAFQIMVSSLGPKLLLTPLDATDTNPITKDFFYNEINKPLTYS 306
Query: 214 AQYCFQSLKMIRDTWSGSPPFH------EAYCMWD 242
Q+ +++ + + F+ + + +WD
Sbjct: 307 GQWLQALFTSVKNIITDASFFNIDHIEGQGFYIWD 341
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 108/252 (42%), Gaps = 44/252 (17%)
Query: 392 EEILRKPDFGKKLMGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSAT 451
E+IL+K + + F D + D +AL +L E L+GI VS TG+ T A
Sbjct: 55 EDILKK---------RNLFFYTDANIDDIIALQSILSNDSEF-KLRGICVSGTGFTTRAI 104
Query: 452 -VDVVYDLLHMMGRDD---------IPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSG 501
+D ++ + + M D IPV LG P + +I +
Sbjct: 105 GLDTIFKVFNFMTEKDNDRYKELLSIPVALG---------SSIPLDSALNFEISILNAT- 154
Query: 502 GFLDSDTLYGLARDLPRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPG 561
++ + L L + +Y N+ + + L V + K ++E EP
Sbjct: 155 ----NNQVRALGDTLWYTKDQYFNNNTNGLVPTNMS-----CTELFVKINKELLELNEP- 204
Query: 562 SKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMF 621
I IL+ GP T+LA ++ L +V+ ++ +V G + N+FT ++ AEFN+F
Sbjct: 205 --IEILSAGPATDLAILLTLY--PNVVDNIELVSQMGGTIDAPANIFTYRNNTVAEFNLF 260
Query: 622 LDPLAAKAVFES 633
+D A + + S
Sbjct: 261 VDIKAFQIMVSS 272
>gi|407977204|ref|ZP_11158091.1| inosine/uridine-preferring nucleoside hydrolase [Nitratireductor
indicus C115]
gi|407427333|gb|EKF40030.1| inosine/uridine-preferring nucleoside hydrolase [Nitratireductor
indicus C115]
Length = 319
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 21/109 (19%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
IT+ +G TN A+ L +P + IE I +MGGA R P
Sbjct: 122 ITLCCLGPMTNIAMALRISPGIASGIERIVMMGGAYRE---------------------P 160
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEF 205
+ +EFN+ DP AA+ V SGIP+ + LDAT + ++ + F
Sbjct: 161 GNRTMTSEFNMLVDPHAAHIVFSSGIPIVALSLDATHQVILTPDHVSAF 209
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 556 ESIEPGSKITILTNGPLTNLAQIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSK 614
E+ + G +IT+ GP+TN+A + + +S I+ + ++GG E GN +
Sbjct: 114 EAAQTGKRITLCCLGPMTNIAMALRISPGIASGIERIVMMGGAY---REPGN-----RTM 165
Query: 615 YAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
+EFNM +DP AA VF S + I + L +V
Sbjct: 166 TSEFNMLVDPHAAHIVFSSGIPIVALSLDATHQV 199
>gi|433460759|ref|ZP_20418383.1| inosine/uridine-preferring nucleoside hydrolase [Halobacillus sp.
BAB-2008]
gi|432191107|gb|ELK48088.1| inosine/uridine-preferring nucleoside hydrolase [Halobacillus sp.
BAB-2008]
Length = 315
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 21/98 (21%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
S G I + + TN A+ + +P + K I H+Y+MGG TN +S+G
Sbjct: 117 SPGEIELLAIAPLTNIALAIKKDPSIIKAIPHLYIMGG---------TN-------NSLG 160
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLD 190
N+ AE+N + DP AA VLHSGIP+T++ D
Sbjct: 161 NI-----TAAAEYNFWVDPEAARIVLHSGIPITMVGWD 193
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 16/96 (16%)
Query: 554 IVESIE--PGSKITILTNGPLTNLAQIIGLQNSSSVIQDV---YIVGGNKGQDNEKGNVF 608
I+E ++ PG +I +L PLTN+A + ++ S+I+ + YI+GG +N GN+
Sbjct: 110 IIEQVKRSPG-EIELLAIAPLTNIA--LAIKKDPSIIKAIPHLYIMGGT---NNSLGNI- 162
Query: 609 TVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHM 644
+ AE+N ++DP AA+ V S + I ++ M
Sbjct: 163 ----TAAAEYNFWVDPEAARIVLHSGIPITMVGWDM 194
>gi|418992272|ref|ZP_13539917.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus aureus subsp. aureus CIG290]
gi|377749589|gb|EHT73537.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus aureus subsp. aureus CIG290]
Length = 289
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 63/116 (54%), Gaps = 3/116 (2%)
Query: 549 DVWKSIVESIEPGS-KITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNV 607
+ ++ I+++++ S K+T+L GPLT+LA+ LQ SS++Q + + G KGNV
Sbjct: 82 EAFEDIIQTLKRQSEKVTLLFTGPLTDLAK--ALQKDSSIVQYIEKLVWMGGTFLPKGNV 139
Query: 608 FTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKK 663
AE+N + DP A K VF+S +EI ++ L +V + + + +K
Sbjct: 140 EEPEHDGSAEWNAYWDPEAVKIVFDSDIEIDMVALESTNQVPLTLDVRQRWANERK 195
>gi|385817181|ref|YP_005853571.1| nucleoside hydrolase [Lactobacillus amylovorus GRL1118]
gi|327183119|gb|AEA31566.1| nucleoside hydrolase [Lactobacillus amylovorus GRL1118]
Length = 308
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 24/109 (22%)
Query: 84 AQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTN 141
A V+ I P +T+ +G T++A+ P +KKNI+ I +MGG
Sbjct: 105 AATVMAEEIKNSPEKVTLLGIGPLTDYALLFKQYPEVKKNIDQIVIMGG----------- 153
Query: 142 SSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLD 190
N+ + +P AE+NI DP AA V HSG+P+ + PL+
Sbjct: 154 -----------NIGRGNHSPLAEYNIAGDPEAAQVVFHSGLPIKVAPLE 191
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 563 KITILTNGPLTNLAQIIG-LQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMF 621
K+T+L GPLT+ A + I + I+GGN G+ N S AE+N+
Sbjct: 119 KVTLLGIGPLTDYALLFKQYPEVKKNIDQIVIMGGNIGRGNH---------SPLAEYNIA 169
Query: 622 LDPLAAKAVFESKLEIKLIPLHMQRR 647
DP AA+ VF S L IK+ PL + +
Sbjct: 170 GDPEAAQVVFHSGLPIKVAPLEIGNK 195
>gi|417907574|ref|ZP_12551345.1| cytidine/uridine-specific hydrolase [Staphylococcus capitis VCU116]
gi|341595603|gb|EGS38246.1| cytidine/uridine-specific hydrolase [Staphylococcus capitis VCU116]
Length = 302
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 22/119 (18%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
S P+T+ +G TN AI L P + I+ I +MGG+ G
Sbjct: 115 SEKPMTIIAIGPLTNIAILLSTYPEVTDYIKEIVLMGGSTGR-----------------G 157
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNT 211
N+ P AEFNI+ DP AA V +SG+P+ +I LD + + ++ F+ + T
Sbjct: 158 NV-----TPLAEFNIYCDPEAAQVVFNSGLPLAMIGLDLAREAIFTHDYVKSFKNQNET 211
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 69/126 (54%), Gaps = 14/126 (11%)
Query: 541 ELRQPLAVDVWK-SIVESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNK 598
+L AV+ K +I++S +P +TI+ GPLTN+A ++ + I+++ ++GG+
Sbjct: 98 DLASTHAVEAMKETILKSEKP---MTIIAIGPLTNIAILLSTYPEVTDYIKEIVLMGGST 154
Query: 599 GQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKL 658
G +GNV + AEFN++ DP AA+ VF S L + +I L + R +
Sbjct: 155 G----RGNV-----TPLAEFNIYCDPEAAQVVFNSGLPLAMIGLDLAREAIFTHDYVKSF 205
Query: 659 RDRKKT 664
+++ +T
Sbjct: 206 KNQNET 211
>gi|293380047|ref|ZP_06626145.1| inosine-uridine preferring nucleoside hydrolase [Lactobacillus
crispatus 214-1]
gi|290923393|gb|EFE00298.1| inosine-uridine preferring nucleoside hydrolase [Lactobacillus
crispatus 214-1]
Length = 308
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 78/157 (49%), Gaps = 26/157 (16%)
Query: 96 PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY 155
PI + + G T+ A L +P ++KNIE +Y MGG++ D GN+
Sbjct: 121 PIALVMTGPLTDLARALDIDPDIEKNIEKLYWMGGSL----------------DGHGNVA 164
Query: 156 PDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQ 215
+++ E+N F DP+A V S IP+ ++ L++T+ +P+++ E RQ+ + +
Sbjct: 165 MVNADGSQEWNSFWDPYAVKRVFESNIPIQMVGLESTEELPLND------ELRQH-WASL 217
Query: 216 YCFQSLKMIRDTWS--GSPPFHEAYCMWDSFMAGVAL 250
+ ++ +I +S S P E Y +WD AL
Sbjct: 218 RKYPAMDLIGQGYSLIVSIPSAELY-LWDVLTTISAL 253
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 538 DDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGG 596
D + + P +D+ + I E+ EP I ++ GPLT+LA+ + + + I+ +Y +GG
Sbjct: 99 DTQQAKLPAHLDMVEKIKEADEP---IALVMTGPLTDLARALDIDPDIEKNIEKLYWMGG 155
Query: 597 NKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLH 643
+ + GNV V + E+N F DP A K VFES + I+++ L
Sbjct: 156 SL---DGHGNVAMVNADGSQEWNSFWDPYAVKRVFESNIPIQMVGLE 199
>gi|239626757|ref|ZP_04669788.1| purine nucleosidase [Clostridiales bacterium 1_7_47_FAA]
gi|239516903|gb|EEQ56769.1| purine nucleosidase [Clostridiales bacterium 1_7_47FAA]
Length = 311
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 72/134 (53%), Gaps = 19/134 (14%)
Query: 542 LRQPLAVDVWKSI-VESIEPGSKITILTNGPLTNLAQ-IIGLQNSSSVIQDVYIVGGNKG 599
L+QP W I E++ + I+ GPLTNLA II + S+I+++ ++GG+
Sbjct: 99 LKQP----SWDFIHDEAVRCRGNLVIIALGPLTNLAAAIIKYPDMESLIKEIVMMGGSAD 154
Query: 600 QDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKI---LH 656
N S YAEFN++ DP +A+ VF+S + ++++ L++ R A F L+
Sbjct: 155 YGNR---------SAYAEFNIWADPHSARIVFDSGIPVRMLGLNVTNRSAIPFNRMGELY 205
Query: 657 KLRDR-KKTPESVF 669
+++ R + E VF
Sbjct: 206 RIKSRISRAVEDVF 219
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 27/174 (15%)
Query: 37 GMSTAGECRYRQAIPVGQRL--YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISA 94
GM+T + + QR+ +++ + GL K +P+ + L+QP+ + A+
Sbjct: 57 GMNTKVAFGAEGPMCIEQRVGSFLHGDRGLGKFDIPKP--TGSALKQPSWDFIHDEAVRC 114
Query: 95 -GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGN 153
G + + +G TN A ++ P ++ I+ I +MGG+ +D N +
Sbjct: 115 RGNLVIIALGPLTNLAAAIIKYPDMESLIKEIVMMGGS--ADYGNRS------------- 159
Query: 154 LYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFER 207
YAEFNI++DP +A V SGIPV ++ L+ T + N E R
Sbjct: 160 -------AYAEFNIWADPHSARIVFDSGIPVRMLGLNVTNRSAIPFNRMGELYR 206
>gi|422868921|ref|ZP_16915446.1| putative cytidine/uridine-specific hydrolase [Enterococcus faecalis
TX1467]
gi|329572815|gb|EGG54443.1| putative cytidine/uridine-specific hydrolase [Enterococcus faecalis
TX1467]
Length = 312
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 31/127 (24%)
Query: 81 QPTAQQVLINAISAG---------PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGA 131
QP + + I+A+ A P+T+ + + TN A+ L P +K+NI I +MGG+
Sbjct: 102 QPISTCLDIHAVEAMRKEILSSDVPLTIVPIAALTNIALLLTLYPEIKENIAEIVMMGGS 161
Query: 132 IRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDA 191
+ GN +N AEFN + DP AA V SG+P+T++ LD
Sbjct: 162 LAR-----------------GN-----TNTSAEFNTYVDPHAAQIVFQSGVPLTMVGLDV 199
Query: 192 TKTIPVS 198
T + ++
Sbjct: 200 TSQVVLT 206
>gi|315037826|ref|YP_004031394.1| nucleoside hydrolase [Lactobacillus amylovorus GRL 1112]
gi|312275959|gb|ADQ58599.1| nucleoside hydrolase [Lactobacillus amylovorus GRL 1112]
Length = 308
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 24/109 (22%)
Query: 84 AQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTN 141
A V+ I P +T+ +G T++A+ P +KKNI+ I +MGG
Sbjct: 105 AATVMAEEIKNSPEKVTLLGIGPLTDYALLFKQYPEVKKNIDQIVIMGG----------- 153
Query: 142 SSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLD 190
N+ + +P AE+NI DP AA V HSG+P+ + PL+
Sbjct: 154 -----------NIGRGNHSPLAEYNIAGDPEAAQVVFHSGLPIKVAPLE 191
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 563 KITILTNGPLTNLAQIIG-LQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMF 621
K+T+L GPLT+ A + I + I+GGN G+ N S AE+N+
Sbjct: 119 KVTLLGIGPLTDYALLFKQYPEVKKNIDQIVIMGGNIGRGNH---------SPLAEYNIA 169
Query: 622 LDPLAAKAVFESKLEIKLIPLHMQRR 647
DP AA+ VF S L IK+ PL + +
Sbjct: 170 GDPEAAQVVFHSGLPIKVAPLEIGNK 195
>gi|307545144|ref|YP_003897623.1| inosine/uridine-preferring nucleoside hydrolase [Halomonas elongata
DSM 2581]
gi|307217168|emb|CBV42438.1| inosine/uridine-preferring nucleoside hydrolase [Halomonas elongata
DSM 2581]
Length = 313
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 23/129 (17%)
Query: 83 TAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNST 140
+A Q +++ ++A P +++ +G N A L +P L ++ + VMGG+IR
Sbjct: 103 SAAQFIVDTVNARPGEVSLVAVGPLGNLAAALQLDPMLVDKVKQVVVMGGSIREG----- 157
Query: 141 NSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSEN 200
GN+ P AE NIF+DP AA VL +G P+ ++ LD T +S +
Sbjct: 158 -----------GNV-----TPVAEANIFNDPHAAARVLTAGWPLVMVGLDVTHRCVLSPS 201
Query: 201 FFVEFERRQ 209
E Q
Sbjct: 202 HMARIEAGQ 210
>gi|149908649|ref|ZP_01897310.1| hypothetical inosine-uridine preferring nucleoside hydrolase
[Moritella sp. PE36]
gi|149808191|gb|EDM68130.1| hypothetical inosine-uridine preferring nucleoside hydrolase
[Moritella sp. PE36]
Length = 322
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 70/156 (44%), Gaps = 27/156 (17%)
Query: 51 PVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNF 108
PVG + V+ GL P A R A Q +I+A+ A P IT+ +G TN
Sbjct: 74 PVGATVVVHGESGLGDVQTPAELSVVADPR--PAYQYIIDALRAEPGEITLVAVGPLTNL 131
Query: 109 AIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIF 168
A+ L P + ++ + VMGGA + D GN+ PYAE NI
Sbjct: 132 ALALEAAPEIVSLVKEVVVMGGAFGVN-------------DHRGNV-----TPYAEANIH 173
Query: 169 SDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVE 204
DP AA V + PV II LD T+ ++FF +
Sbjct: 174 DDPHAADMVFGASWPVVIIGLDVTE-----QSFFTK 204
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 70/117 (59%), Gaps = 17/117 (14%)
Query: 551 WKSIVESI--EPGSKITILTNGPLTNLAQIIGLQNSS---SVIQDVYIVGGNKGQDNEKG 605
++ I++++ EPG +IT++ GPLTNLA + L+ + S++++V ++GG G ++ +G
Sbjct: 106 YQYIIDALRAEPG-EITLVAVGPLTNLA--LALEAAPEIVSLVKEVVVMGGAFGVNDHRG 162
Query: 606 NVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFK--ILHKLRD 660
NV + YAE N+ DP AA VF + + +I L + + SFF L +LRD
Sbjct: 163 NV-----TPYAEANIHDDPHAADMVFGASWPVVIIGLDVTEQ--SFFTKDYLDRLRD 212
>gi|420164256|ref|ZP_14670987.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIHLM095]
gi|420169177|ref|ZP_14675781.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIHLM087]
gi|394231877|gb|EJD77498.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIHLM095]
gi|394232071|gb|EJD77691.1| inosine-uridine preferring nucleoside hydrolase family protein
[Staphylococcus epidermidis NIHLM087]
Length = 313
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 96/198 (48%), Gaps = 10/198 (5%)
Query: 563 KITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFL 622
K+T+L GPLT+LA+ I NS +++++ + G +KGNV AE+N F
Sbjct: 120 KVTLLFTGPLTDLAKAIKYDNS--ILKNIEKLVWMGGTFLDKGNVEEPEHDGTAEWNAFW 177
Query: 623 DPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQ 682
DP A K V +S + + ++ L +V ++ D+++ F L +
Sbjct: 178 DPEAVKVVLDSDMIVDIVALESTNQVPLTMEVRQMWADKRQYLGVDF---LGTSYAAVPP 234
Query: 683 SHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLV 742
H + FL +VL + G+P+L ++ K+K ++++S G G+ E G+ V
Sbjct: 235 LTHFVTNSTYFLWDVLTTSYV-GSPNLVESTKLK-IDVVSQG--PSQGRTF-QSENGREV 289
Query: 743 KVLESLNVAVYYDHFAEV 760
+V+ +N ++ + ++
Sbjct: 290 QVITDVNKQAFFKYITDL 307
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 28/151 (18%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
+T+ G T+ A + + + KNIE + MGG GN+
Sbjct: 121 VTLLFTGPLTDLAKAIKYDNSILKNIEKLVWMGGTFLDK----------------GNVEE 164
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQY 216
+ + AE+N F DP A VL S + V I+ L++T +P++ E RQ + +
Sbjct: 165 PEHDGTAEWNAFWDPEAVKVVLDSDMIVDIVALESTNQVPLT------MEVRQ-MWADKR 217
Query: 217 CFQSLKMIRDTWSGSPPF-----HEAYCMWD 242
+ + + +++ PP + Y +WD
Sbjct: 218 QYLGVDFLGTSYAAVPPLTHFVTNSTYFLWD 248
>gi|184154641|ref|YP_001842981.1| ribonucleoside hydrolase 1 [Lactobacillus fermentum IFO 3956]
gi|183225985|dbj|BAG26501.1| nucleoside hydrolase [Lactobacillus fermentum IFO 3956]
Length = 312
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 101/233 (43%), Gaps = 46/233 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL A LP+ G + P P A +++ + S +T+ V G TN A+FL
Sbjct: 81 VHGETGLDGADLPEPG--FLPQSLP-AIELMARVLQESTEKVTLVVTGPMTNAALFLRTY 137
Query: 116 PHL-KKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAA 174
P L ++ I+ I MGGA+ +GN P EFNIF DP AA
Sbjct: 138 PDLAREKIDQIVFMGGAM-----------------GLGNW-----QPSVEFNIFVDPEAA 175
Query: 175 YTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSP-- 232
VL+ G+P+ ++PL+ T +++ E + N F L + + P
Sbjct: 176 KIVLNFGLPLVMVPLNVTHQAQITKPEINEIAQLDN--PVAQAFVGLLNFFERYHEDPKW 233
Query: 233 -----PFHE----AYCMWDSFMAGVALSIMLNSSSH--NGENACSEMEYMNLT 274
P H+ A+ + + GV +++ + ++ GE C +Y +LT
Sbjct: 234 GFVGAPLHDPCTIAWLINPALFDGVDVNVDVETTGELTRGETVC---DYYHLT 283
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 95/245 (38%), Gaps = 52/245 (21%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M K ++ D D D LA+ + P I+L + S+ T++ +L ++ R
Sbjct: 1 MVKKIILDCDPGHDDALAMTLAVANPA--IDLVAVTTSAGNQTPDKTLNNALRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV G + + P + G L GFL + LP
Sbjct: 59 PDIPVAAGAQVPLVKPLETAPEVHGETGLDGADLPEPGFL--------PQSLP------- 103
Query: 525 AENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGL--Q 582
A+++ +++ E K+T++ GP+TN A +
Sbjct: 104 ----------------------AIELMARVLQ--ESTEKVTLVVTGPMTNAALFLRTYPD 139
Query: 583 NSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+ I + +GG G N + +V EFN+F+DP AAK V L + ++PL
Sbjct: 140 LAREKIDQIVFMGGAMGLGNWQPSV---------EFNIFVDPEAAKIVLNFGLPLVMVPL 190
Query: 643 HMQRR 647
++ +
Sbjct: 191 NVTHQ 195
>gi|75911134|ref|YP_325430.1| inosine/uridine-preferring nucleoside hydrolase [Anabaena
variabilis ATCC 29413]
gi|75704859|gb|ABA24535.1| Inosine/uridine-preferring nucleoside hydrolase [Anabaena
variabilis ATCC 29413]
Length = 307
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 15/145 (10%)
Query: 68 FLPQGGRKYAPLRQPTAQQVLINAISAG--PITVFVMGSHTNFAIFLMNNPHLKKNIEHI 125
L Q + PL + T Q +I + P+T+ V G T A+ L P ++ I+ I
Sbjct: 91 ILNQNELIHTPLVEETGQDFMIRVLREALEPVTLMVTGPLTTVAVALDKAPDIEAKIDKI 150
Query: 126 YVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVT 185
MGGA+ N +S + G+ AE+N++ D +A V S I +
Sbjct: 151 VWMGGALNV----PGNVEKSLEAGQDGS---------AEWNVYWDAVSAVRVWQSEINII 197
Query: 186 IIPLDATKTIPVSENFFVEFERRQN 210
+ PLD T +PV+ + R+++
Sbjct: 198 MCPLDLTNNVPVTSELVYKVGRQRH 222
>gi|325956300|ref|YP_004286910.1| nucleoside hydrolase [Lactobacillus acidophilus 30SC]
gi|325332865|gb|ADZ06773.1| nucleoside hydrolase [Lactobacillus acidophilus 30SC]
Length = 308
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 24/109 (22%)
Query: 84 AQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTN 141
A V+ I P +T+ +G T++A+ P +KKNI+ I +MGG
Sbjct: 105 AATVMAEEIKNSPEKVTLLGIGPLTDYALLFKQYPEVKKNIDQIVIMGG----------- 153
Query: 142 SSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLD 190
N+ + +P AE+NI DP AA V HSG+P+ + PL+
Sbjct: 154 -----------NIGRGNHSPLAEYNIAGDPEAAQVVFHSGLPIKVAPLE 191
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 563 KITILTNGPLTNLAQIIG-LQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMF 621
K+T+L GPLT+ A + I + I+GGN G+ N S AE+N+
Sbjct: 119 KVTLLGIGPLTDYALLFKQYPEVKKNIDQIVIMGGNIGRGNH---------SPLAEYNIA 169
Query: 622 LDPLAAKAVFESKLEIKLIPLHMQRR 647
DP AA+ VF S L IK+ PL + +
Sbjct: 170 GDPEAAQVVFHSGLPIKVAPLEIGNK 195
>gi|254488227|ref|ZP_05101432.1| inosine-uridine preferring nucleoside hydrolase [Roseobacter sp.
GAI101]
gi|214045096|gb|EEB85734.1| inosine-uridine preferring nucleoside hydrolase [Roseobacter sp.
GAI101]
Length = 313
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 66/149 (44%), Gaps = 31/149 (20%)
Query: 51 PVGQRL----YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI---SAGPITVFVMG 103
P+G+ L +V+ GL LP+ PL+ A +I+ + + G +T+ +G
Sbjct: 72 PLGRELVTAEHVHGKTGLDGPVLPE---PTMPLQDGHAVDFIIDTLRDHAPGTVTLCPLG 128
Query: 104 SHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYA 163
TN A L P + I I +MGG F N + P A
Sbjct: 129 PLTNIATALEKAPDIANRIAKIVLMGGGY----FEGGNIT-----------------PVA 167
Query: 164 EFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
EFNI+ DP AA V SG+P+ ++PLD T
Sbjct: 168 EFNIYVDPQAADIVFKSGVPIVVMPLDVT 196
Score = 46.2 bits (108), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 18/115 (15%)
Query: 540 PELRQPL----AVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSV---IQDVY 592
PE PL AVD + PG+ +T+ GPLTN+A L+ + + I +
Sbjct: 95 PEPTMPLQDGHAVDFIIDTLRDHAPGT-VTLCPLGPLTNIAT--ALEKAPDIANRIAKIV 151
Query: 593 IVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
++GG E GN+ + AEFN+++DP AA VF+S + I ++PL + +
Sbjct: 152 LMGGGY---FEGGNI-----TPVAEFNIYVDPQAADIVFKSGVPIVVMPLDVTHK 198
>gi|126739416|ref|ZP_01755109.1| inosine-uridine preferring nucleoside hydrolase [Roseobacter sp.
SK209-2-6]
gi|126719516|gb|EBA16225.1| inosine-uridine preferring nucleoside hydrolase [Roseobacter sp.
SK209-2-6]
Length = 313
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 24/118 (20%)
Query: 78 PLRQPTAQQVLINAI---SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
PL+ +IN + + G +T+ +G +N A L P + + I+ I +MGGA
Sbjct: 100 PLQDQNGVDFIINTLRREAPGSVTLCPLGPLSNIADALQRAPDIAERIQEIVLMGGAYFE 159
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
+GN+ P AEFNI+ DP AA VL SG+ +T++PLD T
Sbjct: 160 ----------------VGNI-----TPAAEFNIYVDPEAADIVLKSGVKITMMPLDVT 196
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 21/132 (15%)
Query: 538 DDPEL---RQPL----AVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSV--- 587
D PEL + PL VD + + PGS +T+ GPL+N+A LQ + +
Sbjct: 90 DGPELIPPQMPLQDQNGVDFIINTLRREAPGS-VTLCPLGPLSNIAD--ALQRAPDIAER 146
Query: 588 IQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
IQ++ ++GG E GN+ + AEFN+++DP AA V +S ++I ++PL + +
Sbjct: 147 IQEIVLMGGAY---FEVGNI-----TPAAEFNIYVDPEAADIVLKSGVKITMMPLDVTHK 198
Query: 648 VASFFKILHKLR 659
+ + +R
Sbjct: 199 ALATRPRIEAIR 210
>gi|414160347|ref|ZP_11416616.1| hypothetical protein HMPREF9310_00990 [Staphylococcus simulans
ACS-120-V-Sch1]
gi|410878493|gb|EKS26373.1| hypothetical protein HMPREF9310_00990 [Staphylococcus simulans
ACS-120-V-Sch1]
Length = 302
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 75/173 (43%), Gaps = 31/173 (17%)
Query: 96 PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY 155
PIT+ +G TN A+ P +K NI+ I +MGG+ GN+
Sbjct: 118 PITLVPIGPLTNIALLFKTYPEVKSNIKAIVLMGGSAGR-----------------GNV- 159
Query: 156 PDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFER-RQNTYEA 214
P AEFNI+ DP AA V +G+P+T++ LD + +S E + Q T+
Sbjct: 160 ----TPAAEFNIYCDPEAADIVFKAGLPITMVGLDVARGASLSSTAINELKSINQTTHML 215
Query: 215 QYCFQSLKMIRDTWSGSPPFHEAYCMW-----DSF-MAGVALSIMLNSSSHNG 261
+ F D + ++AY M + F A A++I LN + G
Sbjct: 216 YHMFNHYH--GDEFDTGIAVYDAYTMLYLLHPEHFKTADAAVAIELNGTYTRG 266
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 13/119 (10%)
Query: 552 KSIVESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEKGNVFTV 610
++I+ES EP IT++ GPLTN+A + S I+ + ++GG+ G +GNV
Sbjct: 110 ETILESDEP---ITLVPIGPLTNIALLFKTYPEVKSNIKAIVLMGGSAG----RGNV--- 159
Query: 611 PSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVF 669
+ AEFN++ DP AA VF++ L I ++ L + R + +++L+ +T ++
Sbjct: 160 --TPAAEFNIYCDPEAADIVFKAGLPITMVGLDVARGASLSSTAINELKSINQTTHMLY 216
>gi|212555329|gb|ACJ27783.1| Purine nucleosidase [Shewanella piezotolerans WP3]
Length = 319
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 22/100 (22%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
S+ P+T+ G TN A+FL P L IE I +MGGA + G
Sbjct: 121 SSEPVTLVPSGPLTNIALFLATYPELHNKIERIVLMGGAAAA-----------------G 163
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
N P AEF I+ DP AA V +GIP+T+ LD T
Sbjct: 164 NW-----TPAAEFKIYVDPEAADMVFKAGIPITMCGLDVT 198
>gi|408790337|ref|ZP_11201963.1| Inosine-uridine preferring nucleoside hydrolase [Lactobacillus
florum 2F]
gi|408520388|gb|EKK20441.1| Inosine-uridine preferring nucleoside hydrolase [Lactobacillus
florum 2F]
Length = 305
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 55/130 (42%), Gaps = 30/130 (23%)
Query: 71 QGGRKY---APLRQPTAQQVLINA-----ISAGPITVFVMGSHTNFAIFLMNNPHLKKNI 122
G R Y AP P Q ++ S+ P+T+ GS+TN A+ L P +K I
Sbjct: 85 SGMRGYDFPAPTTAPLNQTAVVALKERLLASSEPVTLVATGSYTNVALLLSEYPEIKPKI 144
Query: 123 EHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGI 182
I MGG + S AEFN+F+DP AA + +G+
Sbjct: 145 ARIVAMGGTLGQGNMTSA----------------------AEFNVFTDPHAAKIMYQAGV 182
Query: 183 PVTIIPLDAT 192
P+ +I LD T
Sbjct: 183 PIVMIGLDVT 192
Score = 40.0 bits (92), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 13/119 (10%)
Query: 542 LRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIG-LQNSSSVIQDVYIVGGNKGQ 600
L Q V + + ++ S EP +T++ G TN+A ++ I + +GG GQ
Sbjct: 100 LNQTAVVALKERLLASSEP---VTLVATGSYTNVALLLSEYPEIKPKIARIVAMGGTLGQ 156
Query: 601 DNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLR 659
N + AEFN+F DP AAK ++++ + I +I L + + + L +
Sbjct: 157 GN---------MTSAAEFNVFTDPHAAKIMYQAGVPIVMIGLDVTHKALLTYDTLQAIE 206
>gi|406838000|ref|ZP_11097594.1| ABC transporter binding protein [Lactobacillus vini DSM 20605]
Length = 314
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 94/243 (38%), Gaps = 38/243 (15%)
Query: 13 GEGGILPNGTILPDVGGYQPIIDQG------MSTAGECRYRQAIPVGQRLYVNTNYGLRK 66
G + + + P + + IID+ A R P RL + L
Sbjct: 32 GVAAVNADSYLQPSLAASRKIIDRFGHGKKLAVAASSARGVHPFPKEWRLTTYSENAL-- 89
Query: 67 AFLPQGGRKYAPLRQPTAQQVLINAISAG--PITVFVMGSHTNFAIFLMNNPHLKKNIEH 124
L + G+ PL + A LI + A P+T+ G T+ A L +P + + +E
Sbjct: 90 PLLNESGKIITPLAEQPAHLDLIAKLQAATQPVTLLFTGPLTDLAAALKVDPTISQKVER 149
Query: 125 IYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPV 184
+ MGG GN+ DS+ E+N F DP A TV + I +
Sbjct: 150 LIWMGGTFLEK----------------GNVEEPDSDGTQEWNAFWDPAAVKTVFDAPIKI 193
Query: 185 TIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPFHE-----AYC 239
++ L++T +P++ + + A F L I ++++ P ++ Y
Sbjct: 194 DLVSLESTNNVPLTPKVRLH-------WAALRRFTGLDFIGNSYAFVPELNQFATNSTYY 246
Query: 240 MWD 242
+WD
Sbjct: 247 LWD 249
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 5/109 (4%)
Query: 540 PELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKG 599
P QP +D+ + + +P +T+L GPLT+LA L+ ++ Q V + G
Sbjct: 101 PLAEQPAHLDLIAKLQAATQP---VTLLFTGPLTDLAA--ALKVDPTISQKVERLIWMGG 155
Query: 600 QDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
EKGNV S E+N F DP A K VF++ ++I L+ L V
Sbjct: 156 TFLEKGNVEEPDSDGTQEWNAFWDPAAVKTVFDAPIKIDLVSLESTNNV 204
>gi|224477260|ref|YP_002634866.1| putative inosine-uridine preferring nucleoside hydrolase
[Staphylococcus carnosus subsp. carnosus TM300]
gi|222421867|emb|CAL28681.1| putative inosine-uridine preferring nucleoside hydrolase
[Staphylococcus carnosus subsp. carnosus TM300]
Length = 314
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 16/106 (15%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
SA P+T+ G T+ A L P+L +NIE + MGG + G
Sbjct: 117 SALPVTLLFTGPLTDLAKALKTEPNLTQNIERLVWMGGTFLTK----------------G 160
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVS 198
N+ + + AE+N F DP A YTV S I + ++ L++T +P++
Sbjct: 161 NVEEPEHDGTAEWNAFWDPEAVYTVFESDINIDMVALESTNQVPLT 206
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 98/214 (45%), Gaps = 10/214 (4%)
Query: 548 VDVWKSIVESIEPGS-KITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGN 606
++ ++ I+E + + +T+L GPLT+LA+ L+ ++ Q++ + G KGN
Sbjct: 104 LEAYQDIIEKVNQSALPVTLLFTGPLTDLAK--ALKTEPNLTQNIERLVWMGGTFLTKGN 161
Query: 607 VFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPE 666
V AE+N F DP A VFES + I ++ L +V + DR+ +
Sbjct: 162 VEEPEHDGTAEWNAFWDPEAVYTVFESDINIDMVALESTNQVPLTVDVRQYWADRR---Q 218
Query: 667 SVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKSLEIISDGDI 726
+ L + H + FL +VL + G P L ++ ++ +E+I G
Sbjct: 219 HIGVDFLGVCYAVVPPLTHFITNSTYFLWDVLTTAFV-GKPDLVKSEAMQ-VEVIPHG-- 274
Query: 727 SKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEV 760
G+ + E G+ V V+ ++ ++++ ++
Sbjct: 275 PSQGRTVKVMEGGRRVNVVNDVDRNAFFEYMTKL 308
>gi|339006860|ref|ZP_08639435.1| Non-specific ribonucleoside hydrolase RihC [Brevibacillus
laterosporus LMG 15441]
gi|338776069|gb|EGP35597.1| Non-specific ribonucleoside hydrolase RihC [Brevibacillus
laterosporus LMG 15441]
Length = 308
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 23/160 (14%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNP 116
+++ N GL P ++ + A + I + S PIT+ +G TN A+ L P
Sbjct: 81 HIHGNSGLDGYDFPHPKKETLGIHAIEAMRETILS-SKEPITLVPIGPLTNIALLLSVYP 139
Query: 117 HLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYT 176
K+NI+ I MGG+ S GN +P AEFN+F DP AA
Sbjct: 140 ECKQNIKRIVFMGGSA-----------------SRGN-----HSPAAEFNVFVDPEAAKI 177
Query: 177 VLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQY 216
VL SG+ +T+ LD T +++ + T E Y
Sbjct: 178 VLQSGLDITMCGLDVTSLATLTKENVEALKEMNRTGEMLY 217
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 13/119 (10%)
Query: 552 KSIVESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEKGNVFTV 610
++I+ S EP IT++ GPLTN+A ++ + I+ + +GG+ + N
Sbjct: 111 ETILSSKEP---ITLVPIGPLTNIALLLSVYPECKQNIKRIVFMGGSASRGNH------- 160
Query: 611 PSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVF 669
S AEFN+F+DP AAK V +S L+I + L + + + L++ +T E ++
Sbjct: 161 --SPAAEFNVFVDPEAAKIVLQSGLDITMCGLDVTSLATLTKENVEALKEMNRTGEMLY 217
>gi|260433474|ref|ZP_05787445.1| pyrimidine-specific ribonucleoside hydrolase RihA [Silicibacter
lacuscaerulensis ITI-1157]
gi|260417302|gb|EEX10561.1| pyrimidine-specific ribonucleoside hydrolase RihA [Silicibacter
lacuscaerulensis ITI-1157]
Length = 313
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 27/139 (19%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISA---GPITVFVMGSHTNFAIFLM 113
+V+ GL LP PL + +I+ + A G +T+ +G TN A
Sbjct: 82 HVHGKTGLDGPVLPD---PQMPLAEGHGVDFIIDTLRAQDPGTVTLCPLGPLTNIATAFQ 138
Query: 114 NNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFA 173
P + + ++ I +MGGA +GN+ P AEFNI+ DP A
Sbjct: 139 KAPDIVERVQQIVLMGGAYFE----------------VGNI-----TPAAEFNIYVDPEA 177
Query: 174 AYTVLHSGIPVTIIPLDAT 192
A V SG+P+ ++PLD T
Sbjct: 178 ADIVFKSGVPIVVMPLDVT 196
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 12/112 (10%)
Query: 540 PELRQPLA----VDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVG 595
P+ + PLA VD + + +PG+ +T+ GPLTN+A Q + +++ V +
Sbjct: 95 PDPQMPLAEGHGVDFIIDTLRAQDPGT-VTLCPLGPLTNIAT--AFQKAPDIVERVQQIV 151
Query: 596 GNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
G E GN+ + AEFN+++DP AA VF+S + I ++PL + +
Sbjct: 152 LMGGAYFEVGNI-----TPAAEFNIYVDPEAADIVFKSGVPIVVMPLDVTHK 198
>gi|340029376|ref|ZP_08665439.1| purine nucleosidase [Paracoccus sp. TRP]
Length = 320
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 18/138 (13%)
Query: 540 PELRQPLA----VDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVI---QDVY 592
PE PLA VD + EPG+ +T++ GPLTN+A Q + +I Q++
Sbjct: 93 PEPTMPLAPGHAVDFLIETLRREEPGT-VTLVPIGPLTNIAA--AFQRAPDIIPRVQEIV 149
Query: 593 IVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFF 652
++GG E GNV + AEFN+++DP AAK VF S + ++PL + RV +
Sbjct: 150 LMGGAY---FEVGNV-----TPTAEFNIYVDPEAAKIVFASGAPLTVMPLDVTHRVLTSR 201
Query: 653 KILHKLRDRKKTPESVFS 670
+ +R + ++V S
Sbjct: 202 PWVETMRAMGRVGQAVAS 219
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 63/148 (42%), Gaps = 27/148 (18%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI---SAGPITVFVMGSHTNFAIFLM 113
+V+ GL LP+ AP A LI + G +T+ +G TN A
Sbjct: 80 HVHGKTGLDGVTLPEPTMPLAPGH---AVDFLIETLRREEPGTVTLVPIGPLTNIAAAFQ 136
Query: 114 NNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFA 173
P + ++ I +MGGA +GN+ P AEFNI+ DP A
Sbjct: 137 RAPDIIPRVQEIVLMGGAYFE----------------VGNV-----TPTAEFNIYVDPEA 175
Query: 174 AYTVLHSGIPVTIIPLDATKTIPVSENF 201
A V SG P+T++PLD T + S +
Sbjct: 176 AKIVFASGAPLTVMPLDVTHRVLTSRPW 203
>gi|418559408|ref|ZP_13123952.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus 21252]
gi|371975115|gb|EHO92416.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus 21252]
Length = 313
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 63/116 (54%), Gaps = 3/116 (2%)
Query: 549 DVWKSIVESIEPGS-KITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNV 607
+ ++ I+++++ S K+T+L GPLT+LA+ LQ SS++Q + + G KGNV
Sbjct: 106 EAFEDIIQTLKRQSEKVTLLFTGPLTDLAK--ALQKDSSIVQYIEKLVWMGGTFLPKGNV 163
Query: 608 FTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKK 663
AE+N + DP A K VF+S +EI ++ L +V + + + +K
Sbjct: 164 EEPEHDGSAEWNAYWDPEAVKIVFDSDIEIDMVALESTNQVPLTLDVRQRWANERK 219
>gi|330815195|ref|YP_004358900.1| inosine/uridine-preferring nucleoside hydrolase [Burkholderia
gladioli BSR3]
gi|327367588|gb|AEA58944.1| Inosine/uridine-preferring nucleoside hydrolase [Burkholderia
gladioli BSR3]
Length = 383
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 23/140 (16%)
Query: 70 PQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYV 127
P G + L+ +A +++++ P +T+ +G TN A+ +P + I+ I
Sbjct: 150 PDGFATHTKLQAKSALDFIVDSVKQHPGQVTILAIGPLTNIALATRQHPEIVPMIKQIIY 209
Query: 128 MGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTII 187
MGGAI P ++ P AEFN + DP AA VL I ++
Sbjct: 210 MGGAID---------------------VPGNTTPKAEFNWWFDPEAAREVLRLPIKQVVV 248
Query: 188 PLDATKTIPVSENFFVEFER 207
PLD T T+ + ++ + R
Sbjct: 249 PLDVTDTVRMDKSVYDRITR 268
>gi|227326749|ref|ZP_03830773.1| putative nucleoside hydrolase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 329
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 21/97 (21%)
Query: 96 PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY 155
PIT+ +G TN A+ L +P + + I+ I M A ++GN
Sbjct: 121 PITICSLGPLTNLALALCFHPDVARGIKQIVSMSCAF----------------TAMGNRV 164
Query: 156 PDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
P +A+FN+++DP AA V SG+P+ I+PLD T
Sbjct: 165 P-----WADFNVYADPHAAEIVFSSGVPIVIMPLDVT 196
>gi|254463453|ref|ZP_05076869.1| inosine-uridine preferring nucleoside hydrolase [Rhodobacterales
bacterium HTCC2083]
gi|206680042|gb|EDZ44529.1| inosine-uridine preferring nucleoside hydrolase [Rhodobacteraceae
bacterium HTCC2083]
Length = 313
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 64/145 (44%), Gaps = 27/145 (18%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP---ITVFVMGSHTNFAIFLM 113
+V+ GL LP PL+ +I + A P +T+ +G TN A L
Sbjct: 82 HVHGKTGLDGPALPDPDM---PLQDQHGVDFIIETLRARPAETVTLCPLGPLTNIATALQ 138
Query: 114 NNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFA 173
P + + I+ I +MGGA +GN+ P AEFNI+ DP A
Sbjct: 139 RAPDIAERIQEIVLMGGAYFE----------------VGNI-----TPAAEFNIYVDPEA 177
Query: 174 AYTVLHSGIPVTIIPLDATKTIPVS 198
A V SG+ TI+PLD T + V+
Sbjct: 178 ADIVFKSGVNTTIMPLDVTHKVLVT 202
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 60/111 (54%), Gaps = 15/111 (13%)
Query: 554 IVESIE--PGSKITILTNGPLTNLAQIIGLQNSSSV---IQDVYIVGGNKGQDNEKGNVF 608
I+E++ P +T+ GPLTN+A LQ + + IQ++ ++GG E GN+
Sbjct: 110 IIETLRARPAETVTLCPLGPLTNIAT--ALQRAPDIAERIQEIVLMGGAY---FEVGNI- 163
Query: 609 TVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLR 659
+ AEFN+++DP AA VF+S + ++PL + +V K + LR
Sbjct: 164 ----TPAAEFNIYVDPEAADIVFKSGVNTTIMPLDVTHKVLVTLKRIDALR 210
>gi|424047277|ref|ZP_17784837.1| inosine-uridine preferring nucleoside hydrolase [Vibrio cholerae
HENC-03]
gi|408884121|gb|EKM22875.1| inosine-uridine preferring nucleoside hydrolase [Vibrio cholerae
HENC-03]
Length = 322
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 70/154 (45%), Gaps = 27/154 (17%)
Query: 51 PVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNF 108
PVG + V+ G P + + P A Q +I+++ A P IT+ +G TN
Sbjct: 74 PVGATVVVHGEAGFGDVKAPNA-LDVSAIDTP-AYQFIIDSVRAEPGEITLVAVGPLTNL 131
Query: 109 AIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIF 168
A+ L +P + ++ + VMGGA + D GN+ P+AE NI
Sbjct: 132 ALALEADPEIVNLVKEVVVMGGAFGEN-------------DHRGNV-----TPFAEANIH 173
Query: 169 SDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFF 202
DP AA V + PV II LD T+ E+FF
Sbjct: 174 DDPHAADKVFTASWPVVIIGLDVTE-----ESFF 202
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 77/134 (57%), Gaps = 24/134 (17%)
Query: 541 ELRQPLAVDV-------WKSIVESI--EPGSKITILTNGPLTNLAQIIGLQNSSSVI--- 588
+++ P A+DV ++ I++S+ EPG +IT++ GPLTNLA + L+ ++
Sbjct: 89 DVKAPNALDVSAIDTPAYQFIIDSVRAEPG-EITLVAVGPLTNLA--LALEADPEIVNLV 145
Query: 589 QDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
++V ++GG G+++ +GNV + +AE N+ DP AA VF + + +I L +
Sbjct: 146 KEVVVMGGAFGENDHRGNV-----TPFAEANIHDDPHAADKVFTASWPVVIIGLDVTEE- 199
Query: 649 ASFF--KILHKLRD 660
SFF + L +LR+
Sbjct: 200 -SFFTGQYLDQLRE 212
>gi|251799850|ref|YP_003014581.1| inosine/uridine-preferring nucleoside hydrolase [Paenibacillus sp.
JDR-2]
gi|247547476|gb|ACT04495.1| Inosine/uridine-preferring nucleoside hydrolase [Paenibacillus sp.
JDR-2]
Length = 321
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 106/271 (39%), Gaps = 48/271 (17%)
Query: 20 NGTILPDVGGYQPIIDQ-------GMSTAGECRYRQAIPVGQRLYVNTNYGLRKAFLPQG 72
+G + P + + IID+ G R + P ++T + L +
Sbjct: 39 DGYLEPGMAASRKIIDRFGAPGTSGKVEVARSNSRGSNPFPAEWRMHTFFVDALPILNEP 98
Query: 73 GRKYAPLRQPTAQQVLINAISAG--PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGG 130
G + P + A + +I + A P+T+ G T+ A L P ++K I+ + MGG
Sbjct: 99 GVIHTPEAELPAHKHMIRQLLASDEPVTLLFTGPLTDLARALDEAPEIEKKIDKLVWMGG 158
Query: 131 AIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLD 190
FN + Q + D AE+N F DP A V +SGI + ++ L+
Sbjct: 159 -----TFNEQGNVQEPEHDGT-----------AEWNAFWDPEAVDRVWNSGIQIELVALE 202
Query: 191 ATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPF-----HEAYCMWDSFM 245
+T +P++ +N + + L + ++ PP + Y +WD
Sbjct: 203 STNKVPLTVPV-------RNRWASLRKHAGLDFVGQCYAACPPLVFMETNSTYYLWDVLT 255
Query: 246 AGVALSIMLNSSSHNGENACSEMEYMNLTVV 276
V G+ + EM+ ++ TV+
Sbjct: 256 TAVV-----------GDPSLVEMKTVHSTVI 275
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 105/237 (44%), Gaps = 29/237 (12%)
Query: 540 PELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKG 599
PE P + + ++ S EP +T+L GPLT+LA+ L + + + + + G
Sbjct: 104 PEAELPAHKHMIRQLLASDEP---VTLLFTGPLTDLAR--ALDEAPEIEKKIDKLVWMGG 158
Query: 600 QDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLR 659
NE+GNV AE+N F DP A V+ S ++I+L+ L +V + ++
Sbjct: 159 TFNEQGNVQEPEHDGTAEWNAFWDPEAVDRVWNSGIQIELVALESTNKVPLTVPVRNRWA 218
Query: 660 DRKKTPESVFSQRLLQGL--MTLQQSHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKS 717
+K F + + +++ +Y +L +VL ++ G+P L + + S
Sbjct: 219 SLRKHAGLDFVGQCYAACPPLVFMETNSTY-----YLWDVLTTAVV-GDPSLVEMKTVHS 272
Query: 718 LEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYD----HFAEVLGDHKQSAVI 770
+I+ G QG+ V+ + V++ YD F + + Q+AV+
Sbjct: 273 -TVIARG-----------PSQGRTVETADGRPVSLVYDVEPERFFDYITSLSQNAVL 317
>gi|344167453|emb|CCA79680.1| putative ribonucleoside hydrolase [blood disease bacterium R229]
Length = 351
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 67/157 (42%), Gaps = 27/157 (17%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAIS-AGP--ITVFVMGSHTNFAIFLM 113
+V+ GL LP APL A L+ A++ A P +T+ +G TN A L+
Sbjct: 119 HVHGKTGLEGVELPV---PLAPLAPQHAVSYLVGALADAAPNSVTLCALGPLTNLASALI 175
Query: 114 NNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFA 173
P ++ + I +MGGA F N + P AEFNI+ DP A
Sbjct: 176 AAPQIRFALREIVLMGGAF----FERGNIT-----------------PAAEFNIYVDPQA 214
Query: 174 AYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQN 210
A V SG+P+ ++P D P++ F N
Sbjct: 215 AEIVFGSGVPIVVLPRDVAVKAPITPARVAPFRALGN 251
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 9/81 (11%)
Query: 562 SKITILTNGPLTNLAQ-IIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNM 620
+ +T+ GPLTNLA +I ++++ ++GG E+GN+ + AEFN+
Sbjct: 157 NSVTLCALGPLTNLASALIAAPQIRFALREIVLMGG---AFFERGNI-----TPAAEFNI 208
Query: 621 FLDPLAAKAVFESKLEIKLIP 641
++DP AA+ VF S + I ++P
Sbjct: 209 YVDPQAAEIVFGSGVPIVVLP 229
>gi|227113098|ref|ZP_03826754.1| putative nucleoside hydrolase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 323
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 21/97 (21%)
Query: 96 PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY 155
PIT+ +G TN A+ L +P + + I+ I M A + +GN
Sbjct: 121 PITICSLGPLTNLALALCFHPDVARGIKQIVSMSCAFTA----------------MGNRV 164
Query: 156 PDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
P +A+FN+++DP AA V SG+P+ I+PLD T
Sbjct: 165 P-----WADFNVYADPHAAEIVFSSGVPIVIMPLDVT 196
>gi|163746463|ref|ZP_02153821.1| inosine-uridine preferring nucleoside hydrolase [Oceanibulbus
indolifex HEL-45]
gi|161380348|gb|EDQ04759.1| inosine-uridine preferring nucleoside hydrolase [Oceanibulbus
indolifex HEL-45]
Length = 313
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 49/104 (47%), Gaps = 21/104 (20%)
Query: 89 INAISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQC 148
+ A AG +T+ +G TN A L P + + ++ I +MGG F N +
Sbjct: 114 VRAHPAGSVTLCPLGPLTNIATALQKAPDIAEKVQEIVLMGGGY----FEGGNIT----- 164
Query: 149 DSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
P AEFNI+ DP AA V SGIP+ ++PLD T
Sbjct: 165 ------------PTAEFNIYVDPQAADIVFKSGIPIVVMPLDVT 196
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 74/156 (47%), Gaps = 24/156 (15%)
Query: 501 GGFLDSDTLYGLARDLPRSPRRYTAENSVRFGASQDNDDPELRQPLA----VDVWKSIVE 556
G D G R L R+ TAE+ D P+ PLA VD I+E
Sbjct: 58 AGRRDVKVFAGCDRPLGRA--LVTAEHVHGKTGLDGPDLPDPTMPLAEGHGVDF---IIE 112
Query: 557 SIE--PGSKITILTNGPLTNLAQIIGLQNSSSV---IQDVYIVGGNKGQDNEKGNVFTVP 611
+ P +T+ GPLTN+A LQ + + +Q++ ++GG E GN+
Sbjct: 113 QVRAHPAGSVTLCPLGPLTNIAT--ALQKAPDIAEKVQEIVLMGGGY---FEGGNI---- 163
Query: 612 SSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
+ AEFN+++DP AA VF+S + I ++PL + +
Sbjct: 164 -TPTAEFNIYVDPQAADIVFKSGIPIVVMPLDVTHK 198
>gi|428183329|gb|EKX52187.1| hypothetical protein GUITHDRAFT_65378 [Guillardia theta CCMP2712]
Length = 241
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 67/156 (42%), Gaps = 21/156 (13%)
Query: 55 RLYVNTNYGL-RKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIF 111
R + + +YG+ L + GR L Q A L S PITV G T A
Sbjct: 78 RSWRSASYGICHIPRLLRDGRPRTELLQTPAHIHLAECCMKSNTPITVLETGPLTCMARA 137
Query: 112 LMNNPHLKK--NIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFS 169
L P L K I + MGGAI D GN++ + ++ AE+N++
Sbjct: 138 LHAFPELAKPDRISQLVWMGGAI----------------DVEGNVHREGTDGSAEWNVYW 181
Query: 170 DPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEF 205
DP +A V+ +G + I PLD P++ F V+
Sbjct: 182 DPLSAKKVIDAGPKLRICPLDVCNQAPITTKFLVDL 217
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 542 LRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIG----LQNSSSVIQDVYIVGGN 597
L+ P + + + ++S P IT+L GPLT +A+ + L + Q V++
Sbjct: 104 LQTPAHIHLAECCMKSNTP---ITVLETGPLTCMARALHAFPELAKPDRISQLVWM---- 156
Query: 598 KGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHK 657
G + +GNV + AE+N++ DPL+AK V ++ ++++ PL + + K L
Sbjct: 157 GGAIDVEGNVHREGTDGSAEWNVYWDPLSAKKVIDAGPKLRICPLDVCNQAPITTKFLVD 216
Query: 658 L 658
L
Sbjct: 217 L 217
>gi|402567959|ref|YP_006617303.1| inosine-uridine preferring nucleoside hydrolase [Burkholderia
cepacia GG4]
gi|402249156|gb|AFQ49609.1| putative inosine-uridine preferring nucleoside hydrolase
[Burkholderia cepacia GG4]
Length = 350
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 60/137 (43%), Gaps = 24/137 (17%)
Query: 77 APLRQPTAQQVLINAIS-AGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIR 133
APL A L++ +S A P +T+ +G TN A L+ P ++ + I +MGGA
Sbjct: 135 APLAPGHAVSYLVDTLSHAAPNSVTLCALGPLTNIATALVEAPQIRGALREIVLMGGAF- 193
Query: 134 SDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
F N + P AEFNI+ DP AA V SG+P+ ++P D
Sbjct: 194 ---FERGNIT-----------------PAAEFNIYVDPQAADLVFGSGVPIVVLPRDVAV 233
Query: 194 TIPVSENFFVEFERRQN 210
P++ F N
Sbjct: 234 KAPITPARVAPFRALGN 250
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 46/81 (56%), Gaps = 9/81 (11%)
Query: 562 SKITILTNGPLTNLAQ-IIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNM 620
+ +T+ GPLTN+A ++ ++++ ++GG E+GN+ + AEFN+
Sbjct: 156 NSVTLCALGPLTNIATALVEAPQIRGALREIVLMGG---AFFERGNI-----TPAAEFNI 207
Query: 621 FLDPLAAKAVFESKLEIKLIP 641
++DP AA VF S + I ++P
Sbjct: 208 YVDPQAADLVFGSGVPIVVLP 228
>gi|300871192|ref|YP_003786065.1| inosine-uridine preferring nucleoside hydrolase-domain-containing
protein [Brachyspira pilosicoli 95/1000]
gi|300688893|gb|ADK31564.1| inosine-uridine preferring nucleoside hydrolase-domain protein
[Brachyspira pilosicoli 95/1000]
Length = 302
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 60/125 (48%), Gaps = 23/125 (18%)
Query: 69 LPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVM 128
P+ +K P+ A + I S+ IT+ + + TN A+ L P +K NI+ I +M
Sbjct: 90 FPEPSKKILPIHAVEALRETILK-SSEKITLVPIAALTNIAVLLSMYPEVKDNIDEIVMM 148
Query: 129 GGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIP 188
GG++ S GN +N AEFNI+ DP AA V SG+ + ++
Sbjct: 149 GGSL-----------------SGGN-----TNTMAEFNIYVDPHAASIVFQSGVKINMVG 186
Query: 189 LDATK 193
LD T+
Sbjct: 187 LDVTR 191
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 68/130 (52%), Gaps = 11/130 (8%)
Query: 543 RQPLAVDVWKSIVESIEPGS-KITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQ 600
++ L + +++ E+I S KIT++ LTN+A ++ + I ++ ++GG+
Sbjct: 95 KKILPIHAVEALRETILKSSEKITLVPIAALTNIAVLLSMYPEVKDNIDEIVMMGGSLSG 154
Query: 601 DNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRD 660
N ++ AEFN+++DP AA VF+S ++I ++ L + R+ + K+++
Sbjct: 155 GN---------TNTMAEFNIYVDPHAASIVFQSGVKINMVGLDVTRQAVLHHENSLKIKE 205
Query: 661 RKKTPESVFS 670
K E +S
Sbjct: 206 TGKVGEMFYS 215
>gi|300690583|ref|YP_003751578.1| ribonucleoside hydrolase [Ralstonia solanacearum PSI07]
gi|299077643|emb|CBJ50279.1| putative ribonucleoside hydrolase [Ralstonia solanacearum PSI07]
Length = 351
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 67/157 (42%), Gaps = 27/157 (17%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAIS-AGP--ITVFVMGSHTNFAIFLM 113
+V+ GL LP APL A L+ A++ A P +T+ +G TN A L+
Sbjct: 119 HVHGKTGLEGVELPV---PLAPLAPQHAVSYLVGALADAAPNSVTLCALGPLTNLASALI 175
Query: 114 NNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFA 173
P ++ + I +MGGA F N + P AEFNI+ DP A
Sbjct: 176 AAPQIRFALREIVLMGGAF----FERGNIT-----------------PAAEFNIYVDPQA 214
Query: 174 AYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQN 210
A V SG+P+ ++P D P++ F N
Sbjct: 215 AEIVFGSGVPIVVLPRDVAVKAPITPARVAPFRALGN 251
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 9/81 (11%)
Query: 562 SKITILTNGPLTNLAQ-IIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNM 620
+ +T+ GPLTNLA +I ++++ ++GG E+GN+ + AEFN+
Sbjct: 157 NSVTLCALGPLTNLASALIAAPQIRFALREIVLMGG---AFFERGNI-----TPAAEFNI 208
Query: 621 FLDPLAAKAVFESKLEIKLIP 641
++DP AA+ VF S + I ++P
Sbjct: 209 YVDPQAAEIVFGSGVPIVVLP 229
>gi|73661596|ref|YP_300377.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
gi|72494111|dbj|BAE17432.1| putative inosine-uridine preferring nucleoside hydrolase
[Staphylococcus saprophyticus subsp. saprophyticus ATCC
15305]
Length = 315
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 97/247 (39%), Gaps = 70/247 (28%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQRLYVNT 60
+M RDDI V VG +P+I P ++
Sbjct: 56 VMGRDDISVSVGAT----------------RPLIK---------------PASFASQIHG 84
Query: 61 NYGLRKAFLPQGGRKYAPLRQPTAQQ---VLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
+ GL LP+ P +PT +Q V+I + S P+T+ G TN A L+
Sbjct: 85 DSGLDGPKLPE-----VPALKPTQKQAVDVIIETLKQSKEPVTLVATGPLTNIATALIKE 139
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P++ ++IE I +MGG + GN P AEFNI+ D AA
Sbjct: 140 PNITQHIESITIMGGG------------------TFGNW-----TPTAEFNIWVDAEAAK 176
Query: 176 TVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWS-----G 230
V G+ + + LD T + +++ F++ +N A + + L+ + T+
Sbjct: 177 RVFECGVCINVFGLDVTHQVLATDHVIDRFKQIKNPI-ANFVVELLEFFKSTYKTHFDMD 235
Query: 231 SPPFHEA 237
P H+A
Sbjct: 236 GGPIHDA 242
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 121/284 (42%), Gaps = 57/284 (20%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M K ++ D D D +ALI L +++ + + + ++L +MGR
Sbjct: 1 MSKKIIMDCDPGHDDAIALI-LAGAQNSPLDILAVTTVAGNQSVEKNTKNALNVLEVMGR 59
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DDI V +VG P P +A I SG D P+ P
Sbjct: 60 DDISV------SVGATRPLIKP---ASFASQIHGDSG------------LDGPKLPEV-- 96
Query: 525 AENSVRFGASQDNDDPELR--QPLAVDVWKSIVESIEPGSK-ITILTNGPLTNLAQ-IIG 580
P L+ Q AVDV I+E+++ + +T++ GPLTN+A +I
Sbjct: 97 ---------------PALKPTQKQAVDV---IIETLKQSKEPVTLVATGPLTNIATALIK 138
Query: 581 LQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLI 640
N + I+ + I+GG GN + AEFN+++D AAK VFE + I +
Sbjct: 139 EPNITQHIESITIMGGGTF-----GN-----WTPTAEFNIWVDAEAAKRVFECGVCINVF 188
Query: 641 PLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSH 684
L + +V + ++ + + + K P + F LL+ + ++H
Sbjct: 189 GLDVTHQVLATDHVIDRFK-QIKNPIANFVVELLEFFKSTYKTH 231
>gi|423208906|ref|ZP_17195460.1| pyrimidine-specific ribonucleoside hydrolase rihA [Aeromonas
veronii AER397]
gi|404618751|gb|EKB15671.1| pyrimidine-specific ribonucleoside hydrolase rihA [Aeromonas
veronii AER397]
Length = 311
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 74/178 (41%), Gaps = 35/178 (19%)
Query: 51 PVGQRLYVNTNY----GLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGS 104
P+ + L + N GL LP +AP + T +++ + P +T+ G
Sbjct: 70 PLARELIIADNVHGESGLDGPKLPDPA--FAP-QAMTGIELMARCLRESPELVTLVPTGP 126
Query: 105 HTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAE 164
TN A+ L +P LK I I +MGGA + GN P AE
Sbjct: 127 LTNIALLLAAHPELKPRIARIVLMGGAAGA-----------------GNW-----TPAAE 164
Query: 165 FNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFER-RQNTYEAQYCFQSL 221
FNI+ DP AA V SGIP+T+ LD T V + + ER R T C L
Sbjct: 165 FNIYVDPEAADMVFKSGIPITMCGLDVTHEAQVMDE---DIERVRAITNPVAQCVAGL 219
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 104/260 (40%), Gaps = 59/260 (22%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M PV+ D D D +ALI L P +N+ + S+ T++ +L ++GR
Sbjct: 1 MVLPVILDCDPGHDDAIALILALASPE--LNVLAVTTSAGNQTPDKTLNNALRILTLLGR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLA-RDLPRSPRRY 523
DDIPV G PK PL + +D ++G + D P+ P
Sbjct: 59 DDIPVAAG--------APK-------------PLARE-LIIADNVHGESGLDGPKLPDPA 96
Query: 524 TAENS---VRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIG 580
A + + A + PEL +T++ GPLTN+A ++
Sbjct: 97 FAPQAMTGIELMARCLRESPEL---------------------VTLVPTGPLTNIALLLA 135
Query: 581 LQNS-SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKL 639
I + ++GG G N + AEFN+++DP AA VF+S + I +
Sbjct: 136 AHPELKPRIARIVLMGGAAGAGN---------WTPAAEFNIYVDPEAADMVFKSGIPITM 186
Query: 640 IPLHMQRRVASFFKILHKLR 659
L + + + ++R
Sbjct: 187 CGLDVTHEAQVMDEDIERVR 206
>gi|260663691|ref|ZP_05864579.1| nucleoside hydrolase [Lactobacillus fermentum 28-3-CHN]
gi|260551742|gb|EEX24858.1| nucleoside hydrolase [Lactobacillus fermentum 28-3-CHN]
Length = 312
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 28/156 (17%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNN 115
V+ GL A LP+ G + P P A +++ + S +T+ V G TN A+FL
Sbjct: 81 VHGETGLDGADLPEPG--FLPQSLP-AIELMARVLQESTEKVTLVVTGPMTNAALFLRTC 137
Query: 116 PHL-KKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAA 174
P L ++ I+ I MGGA+ +GN P EFNIF DP AA
Sbjct: 138 PDLAREKIDQIVFMGGAM-----------------GLGNW-----QPSVEFNIFVDPEAA 175
Query: 175 YTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQN 210
VL+ G+P+ ++PL+ T +++ E + N
Sbjct: 176 KIVLNFGLPLVMVPLNVTHQAQITKPEIDEIAQLDN 211
Score = 42.7 bits (99), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 95/245 (38%), Gaps = 52/245 (21%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M K ++ D D D LA+ L + I+L + S+ T++ +L ++ R
Sbjct: 1 MVKKIILDCDPGHDDALAMT--LAVANLAIDLVAVTTSAGNQTPDKTLNNALRMLTLLKR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV G + + P + G L GFL + LP
Sbjct: 59 PDIPVAAGAQVPLVKPLETAPKVHGETGLDGADLPEPGFL--------PQSLP------- 103
Query: 525 AENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGL--Q 582
A+++ +++ E K+T++ GP+TN A +
Sbjct: 104 ----------------------AIELMARVLQ--ESTEKVTLVVTGPMTNAALFLRTCPD 139
Query: 583 NSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642
+ I + +GG G N + +V EFN+F+DP AAK V L + ++PL
Sbjct: 140 LAREKIDQIVFMGGAMGLGNWQPSV---------EFNIFVDPEAAKIVLNFGLPLVMVPL 190
Query: 643 HMQRR 647
++ +
Sbjct: 191 NVTHQ 195
>gi|425078443|ref|ZP_18481546.1| non-specific ribonucleoside hydrolase rihC [Klebsiella pneumoniae
subsp. pneumoniae WGLW1]
gi|425089075|ref|ZP_18492168.1| non-specific ribonucleoside hydrolase rihC [Klebsiella pneumoniae
subsp. pneumoniae WGLW3]
gi|405590304|gb|EKB63838.1| non-specific ribonucleoside hydrolase rihC [Klebsiella pneumoniae
subsp. pneumoniae WGLW1]
gi|405600213|gb|EKB73380.1| non-specific ribonucleoside hydrolase rihC [Klebsiella pneumoniae
subsp. pneumoniae WGLW3]
Length = 304
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 70/135 (51%), Gaps = 16/135 (11%)
Query: 543 RQPLAVDVWKSIVESIEPGSK-ITILTNGPLTNLAQIIGLQNSSSV--IQDVYIVGGNKG 599
RQPLA +++I +++ ++ IT++ GPLTN+A ++ Q V I+ + I+GG+ G
Sbjct: 96 RQPLAKPAFQAIRDALMHAAEPITLVAIGPLTNIALLLT-QYPECVFNIRRLVIMGGSAG 154
Query: 600 QDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR---VASFFKILH 656
+ N N AEFN+ +DP AA VF S LEI + L + R A + L
Sbjct: 155 RGNFTPN---------AEFNIAIDPEAAAKVFYSGLEIVMCGLDVTNRALLAADYLATLP 205
Query: 657 KLRDRKKTPESVFSQ 671
L K ++FS
Sbjct: 206 TLNQTGKMLHALFSH 220
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 27/137 (19%)
Query: 80 RQPTAQ---QVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
RQP A+ Q + +A+ +A PIT+ +G TN A+ L P NI + +MGG+
Sbjct: 96 RQPLAKPAFQAIRDALMHAAEPITLVAIGPLTNIALLLTQYPECVFNIRRLVIMGGSAGR 155
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKT 194
GN P+ AEFNI DP AA V +SG+ + + LD T
Sbjct: 156 -----------------GNFTPN-----AEFNIAIDPEAAAKVFYSGLEIVMCGLDVTNR 193
Query: 195 IPVSENFFVEFERRQNT 211
++ ++ T
Sbjct: 194 ALLAADYLATLPTLNQT 210
>gi|344172242|emb|CCA84874.1| putative ribonucleoside hydrolase [Ralstonia syzygii R24]
Length = 351
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 67/157 (42%), Gaps = 27/157 (17%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAIS-AGP--ITVFVMGSHTNFAIFLM 113
+V+ GL LP APL A L+ A++ A P +T+ +G TN A L+
Sbjct: 119 HVHGKTGLEGVELPV---PLAPLAPQHAVSYLVGALADAAPNSVTLCALGPLTNLASALI 175
Query: 114 NNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFA 173
P ++ + I +MGGA F N + P AEFNI+ DP A
Sbjct: 176 AAPQIRFALREIVLMGGAF----FERGNIT-----------------PAAEFNIYVDPQA 214
Query: 174 AYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQN 210
A V SG+P+ ++P D P++ F N
Sbjct: 215 AEIVFGSGVPIVVLPRDVAVKAPITPARVAPFRALGN 251
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 9/81 (11%)
Query: 562 SKITILTNGPLTNLAQ-IIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNM 620
+ +T+ GPLTNLA +I ++++ ++GG E+GN+ + AEFN+
Sbjct: 157 NSVTLCALGPLTNLASALIAAPQIRFALREIVLMGG---AFFERGNI-----TPAAEFNI 208
Query: 621 FLDPLAAKAVFESKLEIKLIP 641
++DP AA+ VF S + I ++P
Sbjct: 209 YVDPQAAEIVFGSGVPIVVLP 229
>gi|365874068|ref|ZP_09413601.1| Inosine-uridine nucleoside N-ribohydrolase [Thermanaerovibrio velox
DSM 12556]
gi|363984155|gb|EHM10362.1| Inosine-uridine nucleoside N-ribohydrolase [Thermanaerovibrio velox
DSM 12556]
Length = 311
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 62/131 (47%), Gaps = 31/131 (23%)
Query: 81 QPTAQQ-------VLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGA 131
+PT QQ ++I + S G IT+ G TN A+ + P + + I+ I +MGG+
Sbjct: 95 EPTVQQDPRHGVDLIIETLMGSDGDITIVPTGPLTNVAMAIRKEPRIVEKIKRIVLMGGS 154
Query: 132 IRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDA 191
+ +GN+ P AEFNI++DP AA+ V SG P+ ++ LD
Sbjct: 155 YQ-----------------LGNV-----TPSAEFNIYADPEAAHVVFSSGRPIVMMGLDL 192
Query: 192 TKTIPVSENFF 202
T+ + S
Sbjct: 193 TRQVRCSSQVI 203
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Query: 564 ITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFL 622
ITI+ GPLTN+A I + I+ + ++GG+ + GNV PS AEFN++
Sbjct: 120 ITIVPTGPLTNVAMAIRKEPRIVEKIKRIVLMGGSY----QLGNV--TPS---AEFNIYA 170
Query: 623 DPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKL 658
DP AA VF S I ++ L + R+V +++ ++
Sbjct: 171 DPEAAHVVFSSGRPIVMMGLDLTRQVRCSSQVIERI 206
>gi|339449385|ref|ZP_08652941.1| ribonucleoside hydrolase RihC [Lactobacillus fructivorans KCTC
3543]
Length = 305
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 22/97 (22%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
+T+ GS+TN A+ L P +K + I MGGA+ GN+
Sbjct: 119 VTLVATGSYTNVALLLSEYPEVKSKLSRIVAMGGALGR-----------------GNM-- 159
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
AEFN+F+DP AA + SG+P+ +I LD TK
Sbjct: 160 ---TSAAEFNVFTDPDAAKIMYQSGVPIVMIGLDVTK 193
Score = 39.7 bits (91), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 54/102 (52%), Gaps = 10/102 (9%)
Query: 563 KITILTNGPLTNLAQIIG-LQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMF 621
++T++ G TN+A ++ S + + +GG G +GN+ + AEFN+F
Sbjct: 118 QVTLVATGSYTNVALLLSEYPEVKSKLSRIVAMGGALG----RGNM-----TSAAEFNVF 168
Query: 622 LDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKK 663
DP AAK +++S + I +I L + +R + L ++++ +
Sbjct: 169 TDPDAAKIMYQSGVPIVMIGLDVTKRALLTNETLEEIQNMNR 210
>gi|384518930|ref|YP_005706235.1| inosine-uridine preferring nucleoside hydrolase family protein
[Enterococcus faecalis 62]
gi|323481063|gb|ADX80502.1| inosine-uridine preferring nucleoside hydrolase family protein
[Enterococcus faecalis 62]
Length = 306
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 31/121 (25%)
Query: 81 QPTAQQVLINAISAG---------PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGA 131
QP + + I+A+ A P+T+ + + TN A+ L P +K+NI I +MGG+
Sbjct: 96 QPISTCLDIHAVEAMRKEILSSDVPLTIVPIAALTNIALLLTLYPEVKENIAEIVMMGGS 155
Query: 132 IRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDA 191
+ GN +N AEFN + DP AA V SG+P+T++ LD
Sbjct: 156 LAR-----------------GN-----TNTSAEFNTYVDPHAAQIVFQSGVPLTMVGLDV 193
Query: 192 T 192
T
Sbjct: 194 T 194
>gi|257079308|ref|ZP_05573669.1| ribonucleoside hydrolase RihC [Enterococcus faecalis JH1]
gi|294779789|ref|ZP_06745176.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis PC1.1]
gi|397700157|ref|YP_006537945.1| inosine-uridine preferring nucleoside hydrolase family protein
[Enterococcus faecalis D32]
gi|256987338|gb|EEU74640.1| ribonucleoside hydrolase RihC [Enterococcus faecalis JH1]
gi|294453163|gb|EFG21578.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis PC1.1]
gi|397336796|gb|AFO44468.1| inosine-uridine preferring nucleoside hydrolase family protein
[Enterococcus faecalis D32]
Length = 306
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 31/121 (25%)
Query: 81 QPTAQQVLINAISAG---------PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGA 131
QP + + I+A+ A P+T+ + + TN A+ L P +K+NI I +MGG+
Sbjct: 96 QPISTCLDIHAVEAMRKEILSSDVPLTIVPIAALTNIALLLTLYPEIKENIAEIVMMGGS 155
Query: 132 IRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDA 191
+ GN +N AEFN + DP AA V SG+P+T++ LD
Sbjct: 156 LAR-----------------GN-----TNTSAEFNTYVDPHAAQIVFQSGVPLTMVGLDV 193
Query: 192 T 192
T
Sbjct: 194 T 194
>gi|319647054|ref|ZP_08001280.1| hypothetical protein HMPREF1012_02318 [Bacillus sp. BT1B_CT2]
gi|317390878|gb|EFV71679.1| hypothetical protein HMPREF1012_02318 [Bacillus sp. BT1B_CT2]
Length = 317
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 115/237 (48%), Gaps = 32/237 (13%)
Query: 537 NDDPELRQPLA-----VDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDV 591
N+ E+R P++ + + + + +S EP +T+L GPLT+LA+ L+ ++I+ +
Sbjct: 92 NEKGEVRTPVSDPPAHLHLIECVRQSPEP---VTLLFTGPLTDLAR--ALEEEPAIIKHI 146
Query: 592 YIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASF 651
+ G EKGNV AE+N F DP + K VFES ++I+++ L +V
Sbjct: 147 AKLVWMGGTFLEKGNVEEPEHDGTAEWNAFWDPYSVKTVFESDIQIEMVALESTNQVP-- 204
Query: 652 FKILHKLRDRKKTPESVFSQRLLQGLMTLQQSH-------HSYHHVDTFLGEVLGAVILG 704
+ +++R S R G+ + Q + H+ + +L +VL + LG
Sbjct: 205 --LTNEIRSHWA------SLRKHIGIDFIGQCYAMCPPLVHNETNSTYYLWDVLTTLTLG 256
Query: 705 GNPHLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEVL 761
++ T + +S++ + + G G++VKV++ ++ ++ +F E++
Sbjct: 257 T---VDMT-RSRSIKAVVHTQSPRQG-TTEEHPDGRMVKVVDQVDRDQFFAYFEELM 308
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 80/197 (40%), Gaps = 25/197 (12%)
Query: 9 VGVGGEGGILPNGTILPDVGGYQPIID-----QGMSTAGECRYRQAIPVGQRLYVNTNYG 63
V + G I + + P + + IID Q + A + R P R++
Sbjct: 28 VKLIGTSVIPADCYLEPALSASRKIIDRFGSYQVETAASDSRGVHPFPKEWRMHAFYVDA 87
Query: 64 LRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKN 121
L L + G P+ P A LI + S P+T+ G T+ A L P + K+
Sbjct: 88 L--PILNEKGEVRTPVSDPPAHLHLIECVRQSPEPVTLLFTGPLTDLARALEEEPAIIKH 145
Query: 122 IEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSG 181
I + MGG GN+ + + AE+N F DP++ TV S
Sbjct: 146 IAKLVWMGGTFLEK----------------GNVEEPEHDGTAEWNAFWDPYSVKTVFESD 189
Query: 182 IPVTIIPLDATKTIPVS 198
I + ++ L++T +P++
Sbjct: 190 IQIEMVALESTNQVPLT 206
>gi|317052968|ref|YP_004119322.1| inosine/uridine-preferring nucleoside hydrolase [Pantoea sp. At-9b]
gi|316953295|gb|ADU72766.1| Inosine/uridine-preferring nucleoside hydrolase [Pantoea sp. At-9b]
Length = 322
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 21/152 (13%)
Query: 95 GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNL 154
G IT+ +G+ +N A+ L+ P + I+ + +M GA+ D GN+
Sbjct: 128 GEITLVCIGAQSNLALALLKAPDIAPLIKQVVMMAGALGLDATWGR-----------GNI 176
Query: 155 YPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEA 214
P AE NI+ DP AA V SGIP+ ++ LD T + + E Q +A
Sbjct: 177 -----TPVAECNIWFDPQAADIVFRSGIPLAMVSLDVTNA---AAGLVLTREHLQGLSDA 228
Query: 215 QYCFQSLKMIRDTWSGSPPF--HEAYCMWDSF 244
Q K + + +P F E ++D
Sbjct: 229 QPLTALFKQVCACYFDAPMFDWSEGCVLYDPL 260
>gi|239813171|ref|YP_002942081.1| inosine/uridine-preferring nucleoside hydrolase [Variovorax
paradoxus S110]
gi|239799748|gb|ACS16815.1| Inosine/uridine-preferring nucleoside hydrolase [Variovorax
paradoxus S110]
Length = 392
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 23/128 (17%)
Query: 70 PQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYV 127
P G + L+ +A +++ + A P IT+ +G TN A+ + NP + I+ I
Sbjct: 158 PDGFATHTVLQPRSAVDFIVDTVKANPNEITILAIGPLTNIALAVKQNPEIVPLIKKIIY 217
Query: 128 MGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTII 187
MGGA+ P ++ +AEFN + DP AA V+ IP ++
Sbjct: 218 MGGAVD---------------------VPGNTTKFAEFNWWFDPEAAQFVVRLPIPQVVV 256
Query: 188 PLDATKTI 195
PLD T T+
Sbjct: 257 PLDVTDTV 264
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 12/98 (12%)
Query: 554 IVESIEPG-SKITILTNGPLTNLAQIIGLQNSSSV--IQDVYIVGGNKGQDNEKGNVFTV 610
IV++++ ++ITIL GPLTN+A + QN V I+ + +GG + GN
Sbjct: 176 IVDTVKANPNEITILAIGPLTNIALAVK-QNPEIVPLIKKIIYMGGAV---DVPGN---- 227
Query: 611 PSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
++K+AEFN + DP AA+ V + ++PL + V
Sbjct: 228 -TTKFAEFNWWFDPEAAQFVVRLPIPQVVVPLDVTDTV 264
>gi|395242750|ref|ZP_10419746.1| Possible ribosylpyrimidine nucleosidase [Lactobacillus pasteurii
CRBIP 24.76]
gi|394479998|emb|CCI85986.1| Possible ribosylpyrimidine nucleosidase [Lactobacillus pasteurii
CRBIP 24.76]
Length = 307
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 56/132 (42%), Gaps = 34/132 (25%)
Query: 71 QGGRKYAPLRQPTAQQVLINA------------ISAGPITVFVMGSHTNFAIFLMNNPHL 118
G + A P A Q L+ A S+ +T+ +G T+FA+ L P +
Sbjct: 82 HGEKGIAGFEFPEADQSLVEAGLATTKMYECIMASSEKVTLLGIGPLTDFALLLKQYPQV 141
Query: 119 KKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVL 178
IE I +MGG N+ + P+AE+NI DP AA V
Sbjct: 142 TSKIEQIVIMGG----------------------NIGHGNYGPFAEYNIAGDPEAAQVVF 179
Query: 179 HSGIPVTIIPLD 190
HSG+PV + PL+
Sbjct: 180 HSGLPVKVAPLE 191
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 19/138 (13%)
Query: 540 PELRQPL------AVDVWKSIVESIEPGSKITILTNGPLTNLAQIIG-LQNSSSVIQDVY 592
PE Q L +++ I+ S E K+T+L GPLT+ A ++ +S I+ +
Sbjct: 93 PEADQSLVEAGLATTKMYECIMASSE---KVTLLGIGPLTDFALLLKQYPQVTSKIEQIV 149
Query: 593 IVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFF 652
I+GGN G N +AE+N+ DP AA+ VF S L +K+ PL + +
Sbjct: 150 IMGGNIGHGN---------YGPFAEYNIAGDPEAAQVVFHSGLPVKVAPLEIGNQAHITK 200
Query: 653 KILHKLRDRKKTPESVFS 670
+ L +++ K E +++
Sbjct: 201 EELDRIKFCGKVGEMLYA 218
>gi|291547444|emb|CBL20552.1| Inosine-uridine nucleoside N-ribohydrolase [Ruminococcus sp. SR1/5]
Length = 320
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 59/139 (42%), Gaps = 23/139 (16%)
Query: 63 GLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFV-MGSHTNFAIFLMNNPHLKKN 121
GL LP+ + A + ++NAI G V + TN A+ L P +K
Sbjct: 88 GLGHCVLPEAKSEAASDNAVLFIRDILNAIPEGEQVVMIETAPMTNLALLLKVFPEIKNK 147
Query: 122 IEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSG 181
I I GGA + GN+ P AEFNI++DP AA V SG
Sbjct: 148 IRKIVFTGGAAKG-----------------GNI-----TPAAEFNIYADPEAAKIVFDSG 185
Query: 182 IPVTIIPLDATKTIPVSEN 200
IP+ + LDAT ++ N
Sbjct: 186 IPLIMCGLDATLKCNLTRN 204
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 21/111 (18%)
Query: 540 PELRQPLAVD----VWKSIVESIEPGSKITILTNGPLTNLAQIIGL--QNSSSVIQDVYI 593
PE + A D + I+ +I G ++ ++ P+TNLA ++ + + + + + V+
Sbjct: 95 PEAKSEAASDNAVLFIRDILNAIPEGEQVVMIETAPMTNLALLLKVFPEIKNKIRKIVFT 154
Query: 594 VGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHM 644
G KG GN+ + AEFN++ DP AAK VF+S IPL M
Sbjct: 155 GGAAKG-----GNI-----TPAAEFNIYADPEAAKIVFDSG-----IPLIM 190
>gi|99080775|ref|YP_612929.1| inosine/uridine-preferring nucleoside hydrolase [Ruegeria sp.
TM1040]
gi|99037055|gb|ABF63667.1| Inosine/uridine-preferring nucleoside hydrolase [Ruegeria sp.
TM1040]
Length = 313
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 21/99 (21%)
Query: 94 AGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGN 153
AG +T+ +G TN A P + + ++ I +MGGA +GN
Sbjct: 119 AGTVTLCPLGPLTNIAAAFRAAPDVVERVQEIVLMGGAYFE----------------VGN 162
Query: 154 LYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
+ P AEFNI+ DP AA+ VL SGI +T++PLD T
Sbjct: 163 I-----TPAAEFNIYVDPEAAHEVLSSGIKITMMPLDVT 196
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 62/123 (50%), Gaps = 10/123 (8%)
Query: 554 IVESI--EPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVP 611
I+E++ EP +T+ GPLTN+A + + V++ V + G E GN+
Sbjct: 110 IIETLRREPAGTVTLCPLGPLTNIAA--AFRAAPDVVERVQEIVLMGGAYFEVGNI---- 163
Query: 612 SSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQ 671
+ AEFN+++DP AA V S ++I ++PL + + + + R ++P F+
Sbjct: 164 -TPAAEFNIYVDPEAAHEVLSSGIKITMMPLDVTHKALTTRARVEAFR-ALQSPVGAFTA 221
Query: 672 RLL 674
+L
Sbjct: 222 DML 224
>gi|403060627|ref|YP_006648844.1| nucleoside hydrolase [Pectobacterium carotovorum subsp. carotovorum
PCC21]
gi|402807953|gb|AFR05591.1| putative nucleoside hydrolase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 325
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 21/97 (21%)
Query: 96 PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY 155
PIT+ +G TN A+ L +P + + I+ I M A + +GN
Sbjct: 121 PITICSLGPLTNLALALCFHPDVARGIKQIVSMSCAFTA----------------MGNRV 164
Query: 156 PDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
P +A+FN+++DP AA V SG+P+ I+PLD T
Sbjct: 165 P-----WADFNVYADPHAAEIVFSSGVPIVIMPLDVT 196
>gi|334118057|ref|ZP_08492147.1| Inosine/uridine-preferring nucleoside hydrolase [Microcoleus
vaginatus FGP-2]
gi|333460042|gb|EGK88652.1| Inosine/uridine-preferring nucleoside hydrolase [Microcoleus
vaginatus FGP-2]
Length = 307
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 62/142 (43%), Gaps = 21/142 (14%)
Query: 65 RKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNI 122
R L + G PL Q ++ + +A P+T+ V G T A L P ++ I
Sbjct: 88 RLPILNEKGTIDTPLISEPGQNFMVRVLRDAAAPVTLMVTGPLTTVAQALDIAPEIESKI 147
Query: 123 EHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPD---DSNPYAEFNIFSDPFAAYTVLH 179
+ I MGGA+ + IGN+ D + AE+N + DP A +
Sbjct: 148 QEIVWMGGAL----------------NVIGNVSKDMEPGQDMSAEWNAYWDPIAIDRIWQ 191
Query: 180 SGIPVTIIPLDATKTIPVSENF 201
+ IPV + PLD T +P++ F
Sbjct: 192 TQIPVVMCPLDITNNVPLTVEF 213
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 155/360 (43%), Gaps = 67/360 (18%)
Query: 407 KPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGRDD 466
K V+ D D + D+L+++ L+ + E + G++V+ V +L +MG +
Sbjct: 4 KLVLMDHDGAVDDYLSVVLLMTM--EEVETLGVIVTPADCYIQPAVSATRKILDLMGCSE 61
Query: 467 IPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAE 526
+PV V + NP FP L + + R LP + T
Sbjct: 62 VPVAASTVRGL---NP-FP-----------------VLFRRDAFAVDR-LPILNEKGTI- 98
Query: 527 NSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ-NSS 585
D P + +P + + + ++ P +T++ GPLT +AQ + +
Sbjct: 99 -----------DTPLISEPGQNFMVRVLRDAAAP---VTLMVTGPLTTVAQALDIAPEIE 144
Query: 586 SVIQDVYIVGG------NKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKL 639
S IQ++ +GG N +D E G + AE+N + DP+A ++++++ + +
Sbjct: 145 SKIQEIVWMGGALNVIGNVSKDMEPGQDMS------AEWNAYWDPIAIDRIWQTQIPVVM 198
Query: 640 IPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLG 699
PL + V + + L ++K P S + Q + D + ++L
Sbjct: 199 CPLDITNNVPLTVEFSNLLARQRKYPISDLA----------GQCYALAISQDYYFWDILA 248
Query: 700 AVILGGNPHLNQTYKIKSLEIISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAE 759
L +P Q + ++ EII++G IS+ G+ V + G+ ++ ++ ++ A +Y++ +
Sbjct: 249 TAYL-AHPEFYQLREWET-EIITEG-ISQ-GRTKV-KSGGRKIQAMDKVDTAKFYNYILQ 303
>gi|260574725|ref|ZP_05842728.1| Inosine/uridine-preferring nucleoside hydrolase [Rhodobacter sp.
SW2]
gi|259023142|gb|EEW26435.1| Inosine/uridine-preferring nucleoside hydrolase [Rhodobacter sp.
SW2]
Length = 314
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 24/126 (19%)
Query: 70 PQGGRKYAPLRQPTAQQVLINAISAGP---ITVFVMGSHTNFAIFLMNNPHLKKNIEHIY 126
PQ PL+ A +I+ + P +T+ +G TN A + P + ++ I
Sbjct: 93 PQLAAPTMPLQAQHAVDFIIDTLRREPAHTVTLCPLGPLTNIATAFLRAPDIIARVQQIV 152
Query: 127 VMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTI 186
+MGGA +GN+ P AEFNI+ DP AA V SG+P+ +
Sbjct: 153 LMGGAYFE----------------VGNI-----TPAAEFNIYVDPEAADIVFKSGVPLVV 191
Query: 187 IPLDAT 192
+PLD T
Sbjct: 192 MPLDVT 197
Score = 45.8 bits (107), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 21/144 (14%)
Query: 538 DDPELRQPL-------AVDVWKSIVESI--EPGSKITILTNGPLTNLAQ-IIGLQNSSSV 587
D P+L P AVD I++++ EP +T+ GPLTN+A + + +
Sbjct: 91 DGPQLAAPTMPLQAQHAVDF---IIDTLRREPAHTVTLCPLGPLTNIATAFLRAPDIIAR 147
Query: 588 IQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
+Q + ++GG E GN+ + AEFN+++DP AA VF+S + + ++PL + +
Sbjct: 148 VQQIVLMGGAY---FEVGNI-----TPAAEFNIYVDPEAADIVFKSGVPLVVMPLDVTHK 199
Query: 648 VASFFKILHKLRDRKKTPESVFSQ 671
+ + R P + ++
Sbjct: 200 ALTTRARIEAFRALGTEPGRMVAE 223
>gi|281209471|gb|EFA83639.1| N-D-ribosylpurine ribohydrolase [Polysphondylium pallidum PN500]
Length = 328
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 87/236 (36%), Gaps = 54/236 (22%)
Query: 6 DIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQRLYVNTNYGLR 65
D+ V G ++ + P++ G D G+ ++ P+ + V+ +R
Sbjct: 64 DVEVVKGAANPLMRPSMVCPEIHG-----DSGLDSSVVWSVDTKSPLEKNAIVHMYDTIR 118
Query: 66 KAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHI 125
FL G T+ + TN A+ P +K +E +
Sbjct: 119 STFLETGKLT----------------------TIIATAALTNVALLFSVFPDVKSMVESV 156
Query: 126 YVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVT 185
++GGA+ ++GN+ P AEFNI DP AA V SG+ +
Sbjct: 157 TLLGGAM-----------------TVGNM-----TPVAEFNILVDPEAAKIVYDSGVKIF 194
Query: 186 IIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSG-----SPPFHE 236
++PL+ + +++ + N+Y + LK + SPP H+
Sbjct: 195 MVPLEVSHKALITKQILERIQSLDNSYFITLSIELLKFFTQQYMNLFGMESPPLHD 250
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 558 IEPGSKITILTNGPLTNLAQIIGL-QNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYA 616
+E G TI+ LTN+A + + + S+++ V ++GG N + A
Sbjct: 122 LETGKLTTIIATAALTNVALLFSVFPDVKSMVESVTLLGGAMTVGN---------MTPVA 172
Query: 617 EFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQ 675
EFN+ +DP AAK V++S ++I ++PL + + +IL +++ + S LL+
Sbjct: 173 EFNILVDPEAAKIVYDSGVKIFMVPLEVSHKALITKQILERIQSLDNSYFITLSIELLK 231
>gi|29376449|ref|NP_815603.1| ribonucleoside hydrolase RihC [Enterococcus faecalis V583]
gi|255972434|ref|ZP_05423020.1| predicted protein [Enterococcus faecalis T1]
gi|255975534|ref|ZP_05426120.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis T2]
gi|256619402|ref|ZP_05476248.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis ATCC 4200]
gi|256853442|ref|ZP_05558812.1| ribonucleoside hydrolase RihC [Enterococcus faecalis T8]
gi|256961583|ref|ZP_05565754.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis Merz96]
gi|256964799|ref|ZP_05568970.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis HIP11704]
gi|257082253|ref|ZP_05576614.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis E1Sol]
gi|257084870|ref|ZP_05579231.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis Fly1]
gi|257087133|ref|ZP_05581494.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis D6]
gi|257416364|ref|ZP_05593358.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis ARO1/DG]
gi|257419611|ref|ZP_05596605.1| predicted protein [Enterococcus faecalis T11]
gi|257422283|ref|ZP_05599273.1| ribonucleoside hydrolase rihC [Enterococcus faecalis X98]
gi|430361681|ref|ZP_19426758.1| putative ribosylpyrimidine nucleosidase [Enterococcus faecalis
OG1X]
gi|430368578|ref|ZP_19428319.1| putative ribosylpyrimidine nucleosidase [Enterococcus faecalis M7]
gi|29343913|gb|AAO81673.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis V583]
gi|255963452|gb|EET95928.1| predicted protein [Enterococcus faecalis T1]
gi|255968406|gb|EET99028.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis T2]
gi|256598929|gb|EEU18105.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis ATCC 4200]
gi|256711901|gb|EEU26939.1| ribonucleoside hydrolase RihC [Enterococcus faecalis T8]
gi|256952079|gb|EEU68711.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis Merz96]
gi|256955295|gb|EEU71927.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis HIP11704]
gi|256990283|gb|EEU77585.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis E1Sol]
gi|256992900|gb|EEU80202.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis Fly1]
gi|256995163|gb|EEU82465.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis D6]
gi|257158192|gb|EEU88152.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis ARO1/DG]
gi|257161439|gb|EEU91399.1| predicted protein [Enterococcus faecalis T11]
gi|257164107|gb|EEU94067.1| ribonucleoside hydrolase rihC [Enterococcus faecalis X98]
gi|429512234|gb|ELA01842.1| putative ribosylpyrimidine nucleosidase [Enterococcus faecalis
OG1X]
gi|429516334|gb|ELA05828.1| putative ribosylpyrimidine nucleosidase [Enterococcus faecalis M7]
Length = 306
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 31/121 (25%)
Query: 81 QPTAQQVLINAISAG---------PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGA 131
QP + + I+A+ A P+T+ + + TN A+ L P +K+NI I +MGG+
Sbjct: 96 QPISTCLDIHAVEAMRKEILSSDVPLTIVPIAALTNIALLLTLYPEVKENIAEIVMMGGS 155
Query: 132 IRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDA 191
+ GN +N AEFN + DP AA V SG+P+T++ LD
Sbjct: 156 LAR-----------------GN-----TNTSAEFNTYVDPHAAQIVFQSGVPLTMVGLDV 193
Query: 192 T 192
T
Sbjct: 194 T 194
>gi|422719418|ref|ZP_16776059.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX0017]
gi|315033244|gb|EFT45176.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX0017]
Length = 312
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 31/121 (25%)
Query: 81 QPTAQQVLINAISAG---------PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGA 131
QP + + I+A+ A P+T+ + + TN A+ L P +K+NI I +MGG+
Sbjct: 102 QPISTCLDIHAVEAMRKEILSSDVPLTIVPIAALTNIALLLTLYPEVKENIAEIVMMGGS 161
Query: 132 IRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDA 191
+ GN +N AEFN + DP AA V SG+P+T++ LD
Sbjct: 162 LAR-----------------GN-----TNTSAEFNTYVDPHAAQIVFQSGVPLTMVGLDV 199
Query: 192 T 192
T
Sbjct: 200 T 200
>gi|84684870|ref|ZP_01012770.1| inosine-uridine preferring nucleoside hydrolase [Maritimibacter
alkaliphilus HTCC2654]
gi|84667205|gb|EAQ13675.1| inosine-uridine preferring nucleoside hydrolase [Maritimibacter
alkaliphilus HTCC2654]
Length = 314
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 81/192 (42%), Gaps = 32/192 (16%)
Query: 78 PLRQPTAQQVLINAIS---AGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
PL+ A +I+ + G +T+ +G TN A P + + + MGGA
Sbjct: 100 PLQSRHAVDFIIDTLRDEPPGTVTLTTLGPLTNVATAFHRAPDIVPRVAEVVSMGGAYFE 159
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKT 194
+GN+ P AEFNI+ DP AA V SG PVTI+PLD T
Sbjct: 160 ----------------VGNI-----TPAAEFNIYVDPEAAEIVFKSGAPVTIMPLDLTHK 198
Query: 195 IPVSE---NFFVEFERRQNTYEAQYCFQSLKMIRDTW-SGSPPFHE----AYCMWDSFMA 246
V++ + F R T+ A+ + ++ + S P H+ AY +
Sbjct: 199 ALVTKPRNDAFRALGTRTGTFTAEMTEFFERFDKEKYGSEGAPLHDPTVIAYLLAPDLFT 258
Query: 247 GVALSIMLNSSS 258
G +++ + ++S
Sbjct: 259 GRFINVEVETTS 270
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 19/119 (15%)
Query: 538 DDPELRQPL-------AVDVWKSIVESI--EPGSKITILTNGPLTNLAQIIGLQNSSSVI 588
D PEL +P AVD I++++ EP +T+ T GPLTN+A + ++
Sbjct: 90 DGPELFEPTMPLQSRHAVDF---IIDTLRDEPPGTVTLTTLGPLTNVAT--AFHRAPDIV 144
Query: 589 QDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
V V G E GN+ + AEFN+++DP AA+ VF+S + ++PL + +
Sbjct: 145 PRVAEVVSMGGAYFEVGNI-----TPAAEFNIYVDPEAAEIVFKSGAPVTIMPLDLTHK 198
>gi|418575077|ref|ZP_13139234.1| putative inosine-uridine preferring nucleoside hydrolase
[Staphylococcus saprophyticus subsp. saprophyticus KACC
16562]
gi|379326532|gb|EHY93653.1| putative inosine-uridine preferring nucleoside hydrolase
[Staphylococcus saprophyticus subsp. saprophyticus KACC
16562]
Length = 309
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 39/190 (20%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQ---VLINAI--SAGPITVFVMGSHTNFAIFL 112
++ + GL LP+ P +PT +Q V+I + S P+T+ G TN A L
Sbjct: 76 IHGDSGLDGPKLPE-----VPALKPTQKQAVDVIIETLKQSKEPVTLVATGPLTNIATAL 130
Query: 113 MNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPF 172
+ P++ ++IE I +MGG + GN P AEFNI+ D
Sbjct: 131 IKEPNITQHIESITIMGGG------------------TFGNW-----TPTAEFNIWVDAE 167
Query: 173 AAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWS--- 229
AA V G+ + + LD T + +++ F++ +N A + + L+ + T+
Sbjct: 168 AAKRVFECGVCINVFGLDVTHQVLATDHVIDRFKQIKNPI-ANFVVELLEFFKSTYKTHF 226
Query: 230 --GSPPFHEA 237
P H+A
Sbjct: 227 DMDGGPIHDA 236
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 103/232 (44%), Gaps = 56/232 (24%)
Query: 457 DLLHMMGRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDL 516
++L +MGRDDI V +VG P P +A I SG D
Sbjct: 46 NVLEVMGRDDISV------SVGATRPLIKP---ASFASQIHGDSG------------LDG 84
Query: 517 PRSPRRYTAENSVRFGASQDNDDPELR--QPLAVDVWKSIVESIEPGSK-ITILTNGPLT 573
P+ P P L+ Q AVDV I+E+++ + +T++ GPLT
Sbjct: 85 PKLPEV-----------------PALKPTQKQAVDV---IIETLKQSKEPVTLVATGPLT 124
Query: 574 NLAQ-IIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFE 632
N+A +I N + I+ + I+GG GN + AEFN+++D AAK VFE
Sbjct: 125 NIATALIKEPNITQHIESITIMGGGTF-----GN-----WTPTAEFNIWVDAEAAKRVFE 174
Query: 633 SKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSH 684
+ I + L + +V + ++ + + + K P + F LL+ + ++H
Sbjct: 175 CGVCINVFGLDVTHQVLATDHVIDRFK-QIKNPIANFVVELLEFFKSTYKTH 225
>gi|256762858|ref|ZP_05503438.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis T3]
gi|256684109|gb|EEU23804.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis T3]
Length = 306
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 31/121 (25%)
Query: 81 QPTAQQVLINAISAG---------PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGA 131
QP + + I+A+ A P+T+ + + TN A+ L P +K+NI I +MGG+
Sbjct: 96 QPISTCLDIHAVEAMRKEILSSDVPLTIVPIAALTNIALLLTLYPEVKENIAEIVMMGGS 155
Query: 132 IRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDA 191
+ GN +N AEFN + DP AA V SG+P+T++ LD
Sbjct: 156 LAR-----------------GN-----TNTSAEFNTYVDPHAAQIVFQSGVPLTMVGLDV 193
Query: 192 T 192
T
Sbjct: 194 T 194
>gi|302384305|ref|YP_003820128.1| inosine/uridine-preferring nucleoside hydrolase [Brevundimonas
subvibrioides ATCC 15264]
gi|302194933|gb|ADL02505.1| Inosine/uridine-preferring nucleoside hydrolase [Brevundimonas
subvibrioides ATCC 15264]
Length = 312
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 21/112 (18%)
Query: 95 GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNL 154
G + + +MG TN A+ + P L + + MGGA RS+ N T
Sbjct: 119 GSVALALMGPMTNLALAMKAEPRLAARMGPVVAMGGA-RSEGGNIT-------------- 163
Query: 155 YPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFE 206
P AEFNI++DP AA V SG + ++ LDAT + +E V E
Sbjct: 164 ------PSAEFNIWADPDAAAEVFASGCEMIVMGLDATHQVRATEARIVALE 209
>gi|307268268|ref|ZP_07549652.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX4248]
gi|306515428|gb|EFM83959.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX4248]
Length = 317
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 31/121 (25%)
Query: 81 QPTAQQVLINAISAG---------PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGA 131
QP + + I+A+ A P+T+ + + TN A+ L P +K+NI I +MGG+
Sbjct: 107 QPISTCLDIHAVEAMRKEILSSDVPLTIVPIAALTNIALLLTLYPEIKENIAEIVMMGGS 166
Query: 132 IRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDA 191
+ GN +N AEFN + DP AA V SG+P+T++ LD
Sbjct: 167 LAR-----------------GN-----TNTSAEFNTYVDPHAAQIVFQSGVPLTMVGLDV 204
Query: 192 T 192
T
Sbjct: 205 T 205
>gi|257090210|ref|ZP_05584571.1| predicted protein [Enterococcus faecalis CH188]
gi|256999022|gb|EEU85542.1| predicted protein [Enterococcus faecalis CH188]
Length = 305
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 31/121 (25%)
Query: 81 QPTAQQVLINAISAG---------PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGA 131
QP + + I+A+ A P+T+ + + TN A+ L P +K+NI I +MGG+
Sbjct: 96 QPISTCLDIHAVEAMRKEILSSDVPLTIVPIAALTNIALLLTLYPEVKENIAEIVMMGGS 155
Query: 132 IRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDA 191
+ GN +N AEFN + DP AA V SG+P+T++ LD
Sbjct: 156 LAR-----------------GN-----TNTSAEFNTYVDPHAAQIVFQSGVPLTMVGLDV 193
Query: 192 T 192
T
Sbjct: 194 T 194
>gi|92113963|ref|YP_573891.1| inosine/uridine-preferring nucleoside hydrolase [Chromohalobacter
salexigens DSM 3043]
gi|91797053|gb|ABE59192.1| Inosine/uridine-preferring nucleoside hydrolase [Chromohalobacter
salexigens DSM 3043]
Length = 314
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 23/111 (20%)
Query: 84 AQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTN 141
A Q ++ ++A P IT+ +G N A L +P + ++ + VMGG+IR
Sbjct: 104 AAQFIVEQVNARPGEITLVAVGPLGNLAAALQLDPGIVDRVKQVVVMGGSIREG------ 157
Query: 142 SSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
GN+ P AE NIF+DP AA VL +G P+T++ LDAT
Sbjct: 158 ----------GNV-----TPVAEANIFNDPHAAARVLTAGWPLTLVGLDAT 193
>gi|90577507|ref|ZP_01233318.1| hypothetical inosine-uridine preferring nucleoside hydrolase
[Photobacterium angustum S14]
gi|90440593|gb|EAS65773.1| hypothetical inosine-uridine preferring nucleoside hydrolase
[Photobacterium angustum S14]
Length = 322
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 70/154 (45%), Gaps = 27/154 (17%)
Query: 51 PVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNF 108
PVG + V+ GL P + + +P A Q +I+++ P IT+ +G TN
Sbjct: 74 PVGATVVVHGEAGLGDVTAPNS-LDFEAIEKP-AYQFIIDSVRENPGEITLVAVGPLTNL 131
Query: 109 AIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIF 168
A+ L P + ++ + VMGGA + D GN+ P+AE NI
Sbjct: 132 ALALEVAPDIVDLVKEVVVMGGAFGEN-------------DHRGNV-----TPFAEANIH 173
Query: 169 SDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFF 202
DP AA V + PV II LD T+ E+FF
Sbjct: 174 DDPHAADKVFTATWPVVIIGLDVTE-----ESFF 202
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 78/142 (54%), Gaps = 25/142 (17%)
Query: 524 TAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIE--PGSKITILTNGPLTNLAQIIGL 581
TA NS+ F A + +P ++ I++S+ PG +IT++ GPLTNLA + +
Sbjct: 91 TAPNSLDFEA--------IEKP----AYQFIIDSVRENPG-EITLVAVGPLTNLALALEV 137
Query: 582 Q-NSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLI 640
+ ++++V ++GG G+++ +GNV + +AE N+ DP AA VF + + +I
Sbjct: 138 APDIVDLVKEVVVMGGAFGENDHRGNV-----TPFAEANIHDDPHAADKVFTATWPVVII 192
Query: 641 PLHMQRRVASFF--KILHKLRD 660
L + SFF + L +LRD
Sbjct: 193 GLDVTEE--SFFTSQYLDELRD 212
>gi|421871187|ref|ZP_16302809.1| inosine-uridine preferring nucleoside hydrolase family protein
[Brevibacillus laterosporus GI-9]
gi|372459814|emb|CCF12358.1| inosine-uridine preferring nucleoside hydrolase family protein
[Brevibacillus laterosporus GI-9]
Length = 293
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 27/196 (13%)
Query: 63 GLRKAFLPQGGRKYAPLRQPTAQQVLINAISA-GPITVFVMGSHTNFAIFLMNNPHLKKN 121
GL A LP+ +K L + +L A + + MG TN A + +P L K
Sbjct: 89 GLEHANLPKPKQKV--LEMSASDFILSKAKECENELIIVTMGRLTNLANAVAKDPSLGKR 146
Query: 122 IEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSG 181
I+ + + GGAIR GN+ AEFN + DP AA VL +
Sbjct: 147 IKQVIIAGGAIRV----------------AGNV-----TAAAEFNFWGDPEAALFVLEAD 185
Query: 182 IPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIR---DTWSGSPPFHEAY 238
+P+TII LD T+ ++ + ++ + + +M+R + + +
Sbjct: 186 LPITIIGLDITQPTLITARHLDQLLHKKTEHTERVLSLIEEMVRFQFEKCEAAEQCQPSI 245
Query: 239 CMWDSFMAGVALSIML 254
M GVAL L
Sbjct: 246 AMQGPLAVGVALDSTL 261
>gi|322696925|gb|EFY88711.1| hypothetical protein MAC_05329 [Metarhizium acridum CQMa 102]
Length = 384
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 99 VFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDD 158
+ GS TN + L +P + +I+ I +MGG++ D F+ S ++ D IGN+
Sbjct: 128 IVATGSLTNIGVLLRRHPQVTSHIKGISIMGGSL-GDGFSDAILSHADNKDRIGNI---- 182
Query: 159 SNPYAEFNIFSDPFAAYTVLHS---GIPVTIIPLDATKTI 195
+AEFNI DP AA V H+ T++PLD T +
Sbjct: 183 -GFWAEFNILIDPEAAAEVFHNKEVAKKTTLVPLDLTHQV 221
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 15/119 (12%)
Query: 544 QPLAVDVWKSIVESI--EPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQ 600
+P+ D +++ E++ +P I+ G LTN+ ++ +S I+ + I+GG+ G
Sbjct: 104 EPVEKDAVEAMFETLMAQPKETAWIVATGSLTNIGVLLRRHPQVTSHIKGISIMGGSLG- 162
Query: 601 DNEKGNVFTVPSSK--------YAEFNMFLDPLAAKAVFESKLEIK---LIPLHMQRRV 648
D + + +K +AEFN+ +DP AA VF +K K L+PL + +V
Sbjct: 163 DGFSDAILSHADNKDRIGNIGFWAEFNILIDPEAAAEVFHNKEVAKKTTLVPLDLTHQV 221
>gi|404416252|ref|ZP_10998075.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
arlettae CVD059]
gi|403491332|gb|EJY96854.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
arlettae CVD059]
Length = 312
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 78/185 (42%), Gaps = 33/185 (17%)
Query: 63 GLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKK 120
GL LP+ R +A A V+I+A+ S P+T+ G TN A L+ + + +
Sbjct: 87 GLDGPKLPETPRHHATPHH--AADVIIDAVKNSDEPVTIVATGPLTNIATALIRDAKIVQ 144
Query: 121 NIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHS 180
NI+ I +MGG + GN P AEFNI++D AA V +
Sbjct: 145 NIKSITIMGGG------------------TFGNW-----TPTAEFNIWADAEAAQRVFNC 181
Query: 181 GIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWS-----GSPPFH 235
G + + LD T + +++ F N A + + LK + T+ P H
Sbjct: 182 GARINVFGLDVTHQVLATDDIIQRFALINNDV-AGFVVELLKFFKSTYKTHFDMDGGPIH 240
Query: 236 EAYCM 240
+A +
Sbjct: 241 DACAI 245
Score = 46.2 bits (108), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 101/254 (39%), Gaps = 48/254 (18%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M + ++ D D D +A+I L + + + S A S ++L +MG+
Sbjct: 1 MSEKIIMDCDPGHDDAIAMI-LAGARTSHLEILAVTTVSGNQAVSKNTRNALNVLDIMGK 59
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
+IPV +G P I +A+ I +G LD LP +PR +
Sbjct: 60 GEIPVSMG---------ASRPLIKEPSFAEEIHGVTG--LD-------GPKLPETPRHHA 101
Query: 525 AENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS 584
P + +D K+ S EP +TI+ GPLTN+A
Sbjct: 102 T--------------PHHAADVIIDAVKN---SDEP---VTIVATGPLTNIA-------- 133
Query: 585 SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHM 644
+++I+D IV K G F + AEFN++ D AA+ VF I + L +
Sbjct: 134 TALIRDAKIVQNIKSITIMGGGTFG-NWTPTAEFNIWADAEAAQRVFNCGARINVFGLDV 192
Query: 645 QRRVASFFKILHKL 658
+V + I+ +
Sbjct: 193 THQVLATDDIIQRF 206
>gi|212709341|ref|ZP_03317469.1| hypothetical protein PROVALCAL_00376 [Providencia alcalifaciens DSM
30120]
gi|422019526|ref|ZP_16366072.1| purine nucleosidase [Providencia alcalifaciens Dmel2]
gi|212688253|gb|EEB47781.1| hypothetical protein PROVALCAL_00376 [Providencia alcalifaciens DSM
30120]
gi|414103121|gb|EKT64704.1| purine nucleosidase [Providencia alcalifaciens Dmel2]
Length = 303
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 66/157 (42%), Gaps = 26/157 (16%)
Query: 53 GQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNFAI 110
G + V+ GL LP+ A +I+++ A P IT+ + S TN AI
Sbjct: 75 GNKTNVHGTDGLAGVLLPESKHHN---DSGHAVDFIIDSVMANPGEITLCAIASLTNIAI 131
Query: 111 FLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSD 170
++ P L N++ I VMGGA + GN+ P AEFN + D
Sbjct: 132 AIIKEPKLIDNVKDIVVMGGAAFTQ----------------GNI-----TPAAEFNFYVD 170
Query: 171 PFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFER 207
P AA+ V S +T++ LD T + E+
Sbjct: 171 PHAAHIVFDSAQHITMLGLDVTSKADIRAGLCTALEK 207
>gi|421873686|ref|ZP_16305297.1| non-specific ribonucleoside hydrolase rihC [Brevibacillus
laterosporus GI-9]
gi|372457232|emb|CCF14846.1| non-specific ribonucleoside hydrolase rihC [Brevibacillus
laterosporus GI-9]
Length = 308
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 23/160 (14%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAIFLMNNP 116
+++ N GL P ++ + A + I + S PIT+ +G TN A+ L P
Sbjct: 81 HIHGNSGLDGYDFPHPKKETLGIHAIEAMRETILS-SKEPITLVPIGPLTNIALLLSVYP 139
Query: 117 HLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYT 176
K+NI+ I MGG+ S GN +P AEFN+F DP AA
Sbjct: 140 ECKQNIKRIVFMGGSA-----------------SRGN-----HSPAAEFNMFVDPEAAKI 177
Query: 177 VLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQY 216
VL SG+ +T+ LD T +++ + T E Y
Sbjct: 178 VLQSGLDITMCGLDVTSLATLTKENVEALKEMNRTGEMLY 217
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 62/119 (52%), Gaps = 13/119 (10%)
Query: 552 KSIVESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEKGNVFTV 610
++I+ S EP IT++ GPLTN+A ++ + I+ + +GG+ + N
Sbjct: 111 ETILSSKEP---ITLVPIGPLTNIALLLSVYPECKQNIKRIVFMGGSASRGNH------- 160
Query: 611 PSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVF 669
S AEFNMF+DP AAK V +S L+I + L + + + L++ +T E ++
Sbjct: 161 --SPAAEFNMFVDPEAAKIVLQSGLDITMCGLDVTSLATLTKENVEALKEMNRTGEMLY 217
>gi|421496091|ref|ZP_15943336.1| Inosine-uridine preferring nucleoside hydrolase superfamily protein
[Aeromonas media WS]
gi|407184987|gb|EKE58799.1| Inosine-uridine preferring nucleoside hydrolase superfamily protein
[Aeromonas media WS]
Length = 311
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 22/100 (22%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
S P+T+ G TN A+ L +P LK I I +MGGA + G
Sbjct: 115 SPEPVTLVPTGPLTNIALLLAAHPELKSKIGRIVLMGGAAGA-----------------G 157
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
N P AEFNI+ DP AA V +GIP+T+ LD T
Sbjct: 158 NW-----TPAAEFNIYVDPEAADMVFSAGIPITLCGLDVT 192
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 104/256 (40%), Gaps = 51/256 (19%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M PV+ D D D +ALI L P + + + S+ T++ +L ++GR
Sbjct: 1 MALPVILDCDPGHDDAIALILALASPE--LKVLAVTTSAGNQTPDKTLNNALRILTLLGR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV G PK P + A + SG LD TL D +P+ T
Sbjct: 59 HDIPVAAG--------APK-PLMRELIIADNVHGESG--LDGPTL----PDPAFAPQAMT 103
Query: 525 AENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS 584
+ K + ES EP +T++ GPLTN+A ++
Sbjct: 104 GLELMA---------------------KCLRESPEP---VTLVPTGPLTNIALLLAAHPE 139
Query: 585 -SSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLH 643
S I + ++GG G N + AEFN+++DP AA VF + + I L L
Sbjct: 140 LKSKIGRIVLMGGAAGAGNW---------TPAAEFNIYVDPEAADMVFSAGIPITLCGLD 190
Query: 644 MQRRVASFFKILHKLR 659
+ + + + ++R
Sbjct: 191 VTHQAQVMDEDIARVR 206
>gi|347759604|ref|YP_004867165.1| nucleoside hydrolase [Gluconacetobacter xylinus NBRC 3288]
gi|347578574|dbj|BAK82795.1| nucleoside hydrolase [Gluconacetobacter xylinus NBRC 3288]
Length = 313
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 58/118 (49%), Gaps = 24/118 (20%)
Query: 78 PLRQPTAQQVLINAISAG---PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
P++ + L++AI A +T+ ++G T+ A+ L P + + + +MGGA
Sbjct: 99 PVQPESGVTYLVDAIRAAQEQELTLVMLGPLTDLAMALTIAPDIAGRLREVVLMGGA--- 155
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
+GN+ P AEFNI++DP AA V +GIP+ ++PLD T
Sbjct: 156 -------------WSELGNI-----TPAAEFNIYADPQAADIVFSAGIPLVVLPLDVT 195
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 105/256 (41%), Gaps = 48/256 (18%)
Query: 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMMGR 464
M + ++ D D D +AL L P I ++ ++ + + TV+ +L M GR
Sbjct: 1 MKRKIIIDTDPGQDDAVALFLALASPE--IAVQAVIAVAGNVPRTRTVENARRVLEMAGR 58
Query: 465 DDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYT 524
DIPV FA G P P ++ P G G DL P
Sbjct: 59 TDIPV-----FA-GAARPLRPTQTTAEHVHG-PTGLDGI-----------DLSVPPTMPV 100
Query: 525 AENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ-N 583
PE VD ++ E ++T++ GPLT+LA + + +
Sbjct: 101 --------------QPESGVTYLVDAIRAAQEQ-----ELTLVMLGPLTDLAMALTIAPD 141
Query: 584 SSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLH 643
+ +++V ++GG +E GN+ + AEFN++ DP AA VF + + + ++PL
Sbjct: 142 IAGRLREVVLMGGAW---SELGNI-----TPAAEFNIYADPQAADIVFSAGIPLVVLPLD 193
Query: 644 MQRRVASFFKILHKLR 659
+ + L LR
Sbjct: 194 VTHKCLGLPDRLAALR 209
>gi|269962130|ref|ZP_06176484.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269833214|gb|EEZ87319.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 322
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 70/154 (45%), Gaps = 27/154 (17%)
Query: 51 PVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNF 108
PVG + V+ G P + + P A Q +I+++ A P IT+ +G TN
Sbjct: 74 PVGATVVVHGEAGFGDVKAPSA-LDVSAIDTP-AYQFIIDSVRAEPGEITLVAVGPLTNL 131
Query: 109 AIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIF 168
A+ L +P + ++ + VMGGA + D GN+ P+AE NI
Sbjct: 132 ALALEADPEIVNLVKEVVVMGGAFGEN-------------DHRGNV-----TPFAEANIH 173
Query: 169 SDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFF 202
DP AA V + PV +I LD T+ E+FF
Sbjct: 174 DDPHAADKVFTASWPVVVIGLDVTE-----ESFF 202
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 77/134 (57%), Gaps = 24/134 (17%)
Query: 541 ELRQPLAVDV-------WKSIVESI--EPGSKITILTNGPLTNLAQIIGLQNSSSVI--- 588
+++ P A+DV ++ I++S+ EPG +IT++ GPLTNLA + L+ ++
Sbjct: 89 DVKAPSALDVSAIDTPAYQFIIDSVRAEPG-EITLVAVGPLTNLA--LALEADPEIVNLV 145
Query: 589 QDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
++V ++GG G+++ +GNV + +AE N+ DP AA VF + + +I L +
Sbjct: 146 KEVVVMGGAFGENDHRGNV-----TPFAEANIHDDPHAADKVFTASWPVVVIGLDVTEE- 199
Query: 649 ASFF--KILHKLRD 660
SFF + L +LR+
Sbjct: 200 -SFFTGQYLDQLRE 212
>gi|325917388|ref|ZP_08179603.1| Inosine-uridine nucleoside N-ribohydrolase [Xanthomonas vesicatoria
ATCC 35937]
gi|325536429|gb|EGD08210.1| Inosine-uridine nucleoside N-ribohydrolase [Xanthomonas vesicatoria
ATCC 35937]
Length = 332
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 14/99 (14%)
Query: 95 GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNL 154
G +T+ V+G T+ A+ +P ++ I MGG++R S
Sbjct: 143 GQVTLLVLGPMTDAALAQQRDPAGFAKLKRIVAMGGSVRVGYGKSA-------------- 188
Query: 155 YPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
Y S P AE+NI SD AA V +G+P+ ++PLDAT+
Sbjct: 189 YRPASAPAAEYNIVSDVAAAQRVFAAGVPIVLLPLDATQ 227
>gi|269792178|ref|YP_003317082.1| ribosylpyrimidine nucleosidase [Thermanaerovibrio acidaminovorans
DSM 6589]
gi|269099813|gb|ACZ18800.1| Ribosylpyrimidine nucleosidase [Thermanaerovibrio acidaminovorans
DSM 6589]
Length = 311
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 22/103 (21%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
S G +++ G TN A+ + +P + I+ I +MGG+ + +G
Sbjct: 116 SDGDVSILPTGPLTNVAMAMRKDPRIVSKIKRIVLMGGSYQ-----------------LG 158
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTI 195
N+ P AEFNI++DP AA+ V SG+P+ ++ LD T+ +
Sbjct: 159 NV-----TPAAEFNIYADPEAAHVVFSSGVPIVMMGLDLTRQV 196
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Query: 564 ITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFL 622
++IL GPLTN+A + S I+ + ++GG+ + GNV + AEFN++
Sbjct: 120 VSILPTGPLTNVAMAMRKDPRIVSKIKRIVLMGGSY----QLGNV-----TPAAEFNIYA 170
Query: 623 DPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKL 658
DP AA VF S + I ++ L + R+V +++ ++
Sbjct: 171 DPEAAHVVFSSGVPIVMMGLDLTRQVRCTRQVIDRM 206
>gi|422730196|ref|ZP_16786589.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX0012]
gi|315149325|gb|EFT93341.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX0012]
Length = 317
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 31/121 (25%)
Query: 81 QPTAQQVLINAISAG---------PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGA 131
QP + + I+A+ A P+T+ + + TN A+ L P +K+NI I +MGG+
Sbjct: 107 QPISTCLDIHAVEAMRKEILSSDVPLTIVPIAALTNIALLLTLYPEVKENIAEIVMMGGS 166
Query: 132 IRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDA 191
+ GN +N AEFN + DP AA V SG+P+T++ LD
Sbjct: 167 LAR-----------------GN-----TNTSAEFNTYVDPHAAQIVFQSGVPLTMVGLDV 204
Query: 192 T 192
T
Sbjct: 205 T 205
>gi|256959240|ref|ZP_05563411.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis DS5]
gi|300861210|ref|ZP_07107297.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TUSoD Ef11]
gi|428767329|ref|YP_007153440.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis str. Symbioflor 1]
gi|256949736|gb|EEU66368.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis DS5]
gi|300850249|gb|EFK77999.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TUSoD Ef11]
gi|427185502|emb|CCO72726.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis str. Symbioflor 1]
Length = 306
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 31/121 (25%)
Query: 81 QPTAQQVLINAISAG---------PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGA 131
QP + + I+A+ A P+T+ + + TN A+ L P +K+NI I +MGG+
Sbjct: 96 QPISTCLDIHAVEAMRKEILSSDVPLTIVPIAALTNIALLLTLYPEVKENIAEIVMMGGS 155
Query: 132 IRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDA 191
+ GN +N AEFN + DP AA V SG+P+T++ LD
Sbjct: 156 LAR-----------------GN-----TNTSAEFNTYVDPHAAQIVFQSGVPLTMVGLDV 193
Query: 192 T 192
T
Sbjct: 194 T 194
>gi|312902706|ref|ZP_07761910.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX0635]
gi|310633760|gb|EFQ17043.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX0635]
Length = 316
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 31/121 (25%)
Query: 81 QPTAQQVLINAISAG---------PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGA 131
QP + + I+A+ A P+T+ + + TN A+ L P +K+NI I +MGG+
Sbjct: 107 QPISTCLDIHAVEAMRKEILSSDVPLTIVPIAALTNIALLLTLYPEVKENIAEIVMMGGS 166
Query: 132 IRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDA 191
+ GN +N AEFN + DP AA V SG+P+T++ LD
Sbjct: 167 LAR-----------------GN-----TNTSAEFNTYVDPHAAQIVFQSGVPLTMVGLDV 204
Query: 192 T 192
T
Sbjct: 205 T 205
>gi|227519267|ref|ZP_03949316.1| possible ribosylpyrimidine nucleosidase [Enterococcus faecalis
TX0104]
gi|227555526|ref|ZP_03985573.1| possible ribosylpyrimidine nucleosidase [Enterococcus faecalis
HH22]
gi|229545492|ref|ZP_04434217.1| possible ribosylpyrimidine nucleosidase [Enterococcus faecalis
TX1322]
gi|229549738|ref|ZP_04438463.1| possible ribosylpyrimidine nucleosidase [Enterococcus faecalis ATCC
29200]
gi|293382415|ref|ZP_06628352.1| cytidine/uridine-specific hydrolase [Enterococcus faecalis R712]
gi|293388264|ref|ZP_06632780.1| cytidine/uridine-specific hydrolase [Enterococcus faecalis S613]
gi|307272881|ref|ZP_07554128.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX0855]
gi|307275633|ref|ZP_07556774.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX2134]
gi|307280536|ref|ZP_07561585.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX0860]
gi|307295957|ref|ZP_07575789.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX0411]
gi|312900926|ref|ZP_07760220.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX0470]
gi|312908358|ref|ZP_07767322.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis DAPTO 512]
gi|312910569|ref|ZP_07769411.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis DAPTO 516]
gi|384513549|ref|YP_005708642.1| putative ribosylpyrimidine nucleosidase [Enterococcus faecalis
OG1RF]
gi|422686340|ref|ZP_16744538.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX4000]
gi|422690266|ref|ZP_16748323.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX0630]
gi|422695304|ref|ZP_16753292.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX4244]
gi|422702086|ref|ZP_16759926.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX1342]
gi|422705479|ref|ZP_16763281.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX0043]
gi|422713235|ref|ZP_16769988.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX0309A]
gi|422717228|ref|ZP_16773918.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX0309B]
gi|422723969|ref|ZP_16780459.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX2137]
gi|422725153|ref|ZP_16781621.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX0312]
gi|422732507|ref|ZP_16788838.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX0645]
gi|422735814|ref|ZP_16792080.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX1341]
gi|422741799|ref|ZP_16795821.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX2141]
gi|424672893|ref|ZP_18109836.1| putative cytidine/uridine-specific hydrolase [Enterococcus faecalis
599]
gi|424678385|ref|ZP_18115225.1| putative cytidine/uridine-specific hydrolase [Enterococcus faecalis
ERV103]
gi|424681758|ref|ZP_18118544.1| putative cytidine/uridine-specific hydrolase [Enterococcus faecalis
ERV116]
gi|424684580|ref|ZP_18121291.1| putative cytidine/uridine-specific hydrolase [Enterococcus faecalis
ERV129]
gi|424687713|ref|ZP_18124342.1| putative cytidine/uridine-specific hydrolase [Enterococcus faecalis
ERV25]
gi|424691005|ref|ZP_18127532.1| putative cytidine/uridine-specific hydrolase [Enterococcus faecalis
ERV31]
gi|424694683|ref|ZP_18131079.1| putative cytidine/uridine-specific hydrolase [Enterococcus faecalis
ERV37]
gi|424697257|ref|ZP_18133587.1| putative cytidine/uridine-specific hydrolase [Enterococcus faecalis
ERV41]
gi|424702115|ref|ZP_18138278.1| putative cytidine/uridine-specific hydrolase [Enterococcus faecalis
ERV62]
gi|424704335|ref|ZP_18140437.1| putative cytidine/uridine-specific hydrolase [Enterococcus faecalis
ERV63]
gi|424712802|ref|ZP_18144971.1| putative cytidine/uridine-specific hydrolase [Enterococcus faecalis
ERV65]
gi|424715914|ref|ZP_18145236.1| putative cytidine/uridine-specific hydrolase [Enterococcus faecalis
ERV68]
gi|424722306|ref|ZP_18151370.1| putative cytidine/uridine-specific hydrolase [Enterococcus faecalis
ERV72]
gi|424724522|ref|ZP_18153465.1| putative cytidine/uridine-specific hydrolase [Enterococcus faecalis
ERV73]
gi|424726715|ref|ZP_18155369.1| putative cytidine/uridine-specific hydrolase [Enterococcus faecalis
ERV81]
gi|424740470|ref|ZP_18168852.1| putative cytidine/uridine-specific hydrolase [Enterococcus faecalis
ERV85]
gi|424749827|ref|ZP_18177904.1| putative cytidine/uridine-specific hydrolase [Enterococcus faecalis
ERV93]
gi|424759984|ref|ZP_18187639.1| putative cytidine/uridine-specific hydrolase [Enterococcus faecalis
R508]
gi|227073279|gb|EEI11242.1| possible ribosylpyrimidine nucleosidase [Enterococcus faecalis
TX0104]
gi|227175331|gb|EEI56303.1| possible ribosylpyrimidine nucleosidase [Enterococcus faecalis
HH22]
gi|229305007|gb|EEN71003.1| possible ribosylpyrimidine nucleosidase [Enterococcus faecalis ATCC
29200]
gi|229309408|gb|EEN75395.1| possible ribosylpyrimidine nucleosidase [Enterococcus faecalis
TX1322]
gi|291080191|gb|EFE17555.1| cytidine/uridine-specific hydrolase [Enterococcus faecalis R712]
gi|291082346|gb|EFE19309.1| cytidine/uridine-specific hydrolase [Enterococcus faecalis S613]
gi|306496288|gb|EFM65867.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX0411]
gi|306504084|gb|EFM73300.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX0860]
gi|306507738|gb|EFM76867.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX2134]
gi|306510495|gb|EFM79518.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX0855]
gi|310625772|gb|EFQ09055.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis DAPTO 512]
gi|311289117|gb|EFQ67673.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis DAPTO 516]
gi|311292025|gb|EFQ70581.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX0470]
gi|315025932|gb|EFT37864.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX2137]
gi|315028970|gb|EFT40902.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX4000]
gi|315143504|gb|EFT87520.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX2141]
gi|315147587|gb|EFT91603.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX4244]
gi|315157007|gb|EFU01024.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX0043]
gi|315159839|gb|EFU03856.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX0312]
gi|315161531|gb|EFU05548.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX0645]
gi|315167349|gb|EFU11366.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX1341]
gi|315169567|gb|EFU13584.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX1342]
gi|315574486|gb|EFU86677.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX0309B]
gi|315576781|gb|EFU88972.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX0630]
gi|315581852|gb|EFU94043.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX0309A]
gi|327535438|gb|AEA94272.1| putative ribosylpyrimidine nucleosidase [Enterococcus faecalis
OG1RF]
gi|402350442|gb|EJU85345.1| putative cytidine/uridine-specific hydrolase [Enterococcus faecalis
ERV116]
gi|402351713|gb|EJU86593.1| putative cytidine/uridine-specific hydrolase [Enterococcus faecalis
ERV103]
gi|402353399|gb|EJU88231.1| putative cytidine/uridine-specific hydrolase [Enterococcus faecalis
599]
gi|402360916|gb|EJU95509.1| putative cytidine/uridine-specific hydrolase [Enterococcus faecalis
ERV129]
gi|402363071|gb|EJU97580.1| putative cytidine/uridine-specific hydrolase [Enterococcus faecalis
ERV31]
gi|402363505|gb|EJU97983.1| putative cytidine/uridine-specific hydrolase [Enterococcus faecalis
ERV25]
gi|402370121|gb|EJV04361.1| putative cytidine/uridine-specific hydrolase [Enterococcus faecalis
ERV62]
gi|402370318|gb|EJV04538.1| putative cytidine/uridine-specific hydrolase [Enterococcus faecalis
ERV37]
gi|402376195|gb|EJV10154.1| putative cytidine/uridine-specific hydrolase [Enterococcus faecalis
ERV41]
gi|402379679|gb|EJV13471.1| putative cytidine/uridine-specific hydrolase [Enterococcus faecalis
ERV65]
gi|402382424|gb|EJV16091.1| putative cytidine/uridine-specific hydrolase [Enterococcus faecalis
ERV63]
gi|402389188|gb|EJV22589.1| putative cytidine/uridine-specific hydrolase [Enterococcus faecalis
ERV68]
gi|402389313|gb|EJV22712.1| putative cytidine/uridine-specific hydrolase [Enterococcus faecalis
ERV72]
gi|402394793|gb|EJV27943.1| putative cytidine/uridine-specific hydrolase [Enterococcus faecalis
ERV73]
gi|402398716|gb|EJV31640.1| putative cytidine/uridine-specific hydrolase [Enterococcus faecalis
ERV81]
gi|402402083|gb|EJV34819.1| putative cytidine/uridine-specific hydrolase [Enterococcus faecalis
ERV85]
gi|402404055|gb|EJV36689.1| putative cytidine/uridine-specific hydrolase [Enterococcus faecalis
R508]
gi|402407520|gb|EJV40046.1| putative cytidine/uridine-specific hydrolase [Enterococcus faecalis
ERV93]
Length = 317
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 31/121 (25%)
Query: 81 QPTAQQVLINAISAG---------PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGA 131
QP + + I+A+ A P+T+ + + TN A+ L P +K+NI I +MGG+
Sbjct: 107 QPISTCLDIHAVEAMRKEILSSDVPLTIVPIAALTNIALLLTLYPEVKENIAEIVMMGGS 166
Query: 132 IRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDA 191
+ GN +N AEFN + DP AA V SG+P+T++ LD
Sbjct: 167 LAR-----------------GN-----TNTSAEFNTYVDPHAAQIVFQSGVPLTMVGLDV 204
Query: 192 T 192
T
Sbjct: 205 T 205
>gi|307287927|ref|ZP_07567960.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX0109]
gi|422704832|ref|ZP_16762642.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX1302]
gi|306501072|gb|EFM70379.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX0109]
gi|315163621|gb|EFU07638.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX1302]
Length = 317
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 31/121 (25%)
Query: 81 QPTAQQVLINAISAG---------PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGA 131
QP + + I+A+ A P+T+ + + TN A+ L P +K+NI I +MGG+
Sbjct: 107 QPISTCLDIHAVEAMRKEILSSDVPLTIVPIAALTNIALLLTLYPEVKENIAEIVMMGGS 166
Query: 132 IRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDA 191
+ GN +N AEFN + DP AA V SG+P+T++ LD
Sbjct: 167 LAR-----------------GN-----TNTSAEFNTYVDPHAAQIVFQSGVPLTMVGLDV 204
Query: 192 T 192
T
Sbjct: 205 T 205
>gi|423681136|ref|ZP_17655975.1| inosine-uridine preferring nucleoside hydrolase [Bacillus
licheniformis WX-02]
gi|383442242|gb|EID49951.1| inosine-uridine preferring nucleoside hydrolase [Bacillus
licheniformis WX-02]
Length = 317
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 64/117 (54%), Gaps = 10/117 (8%)
Query: 537 NDDPELRQPLA-----VDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDV 591
N+ E+R P++ + + + + +S EP +T+L GPLT+LA+ L+ ++I+ +
Sbjct: 92 NEKGEVRTPVSELPAHLHLIECVRQSPEP---VTLLFTGPLTDLAR--ALEEEPAIIKHI 146
Query: 592 YIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
+ G EKGNV AE+N F DP + K VFES ++I+++ L +V
Sbjct: 147 AKLVWMGGTFLEKGNVEEPEHDGTAEWNAFWDPYSVKTVFESDIQIEMVALESTNQV 203
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 80/197 (40%), Gaps = 25/197 (12%)
Query: 9 VGVGGEGGILPNGTILPDVGGYQPIID-----QGMSTAGECRYRQAIPVGQRLYVNTNYG 63
V + G I + + P + + IID Q + A + R P R++
Sbjct: 28 VKLIGTSVIPADCYLEPALSASRKIIDRFGSYQVETAASDSRGVHPFPKEWRMHAFYVDA 87
Query: 64 LRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKN 121
L L + G P+ + A LI + S P+T+ G T+ A L P + K+
Sbjct: 88 L--PILNEKGEVRTPVSELPAHLHLIECVRQSPEPVTLLFTGPLTDLARALEEEPAIIKH 145
Query: 122 IEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSG 181
I + MGG GN+ + + AE+N F DP++ TV S
Sbjct: 146 IAKLVWMGGTFLEK----------------GNVEEPEHDGTAEWNAFWDPYSVKTVFESD 189
Query: 182 IPVTIIPLDATKTIPVS 198
I + ++ L++T +P++
Sbjct: 190 IQIEMVALESTNQVPLT 206
>gi|52079172|ref|YP_077963.1| inosine-uridine preferring nucleoside hydrolase [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|404488039|ref|YP_006712145.1| inosine-uridine preferring nucleoside hydrolase [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|52002383|gb|AAU22325.1| putative inosine-uridine preferring nucleoside hydrolase [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|52347041|gb|AAU39675.1| putative inosine-uridine preferring nucleoside hydrolase [Bacillus
licheniformis DSM 13 = ATCC 14580]
Length = 317
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 64/117 (54%), Gaps = 10/117 (8%)
Query: 537 NDDPELRQPLA-----VDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDV 591
N+ E+R P++ + + + + +S EP +T+L GPLT+LA+ L+ ++I+ +
Sbjct: 92 NEKGEVRTPVSELPAHLHLIECVRQSPEP---VTLLFTGPLTDLAR--ALEEEPAIIKHI 146
Query: 592 YIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
+ G EKGNV AE+N F DP + K VFES ++I+++ L +V
Sbjct: 147 AKLVWMGGTFLEKGNVEEPEHDGTAEWNAFWDPYSVKTVFESDIQIEMVALESTNQV 203
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 80/197 (40%), Gaps = 25/197 (12%)
Query: 9 VGVGGEGGILPNGTILPDVGGYQPIID-----QGMSTAGECRYRQAIPVGQRLYVNTNYG 63
V + G I + + P + + IID Q + A + R P R++
Sbjct: 28 VKLIGTSVIPADCYLEPALSASRKIIDRFGSYQVETAASDSRGVHPFPKEWRMHAFYVDA 87
Query: 64 LRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKN 121
L L + G P+ + A LI + S P+T+ G T+ A L P + K+
Sbjct: 88 L--PILNEKGEVRTPVSELPAHLHLIECVRQSPEPVTLLFTGPLTDLARALEEEPAIIKH 145
Query: 122 IEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSG 181
I + MGG GN+ + + AE+N F DP++ TV S
Sbjct: 146 IAKLVWMGGTFLEK----------------GNVEEPEHDGTAEWNAFWDPYSVKTVFESD 189
Query: 182 IPVTIIPLDATKTIPVS 198
I + ++ L++T +P++
Sbjct: 190 IQIEMVALESTNQVPLT 206
>gi|398810731|ref|ZP_10569542.1| Inosine-uridine nucleoside N-ribohydrolase [Variovorax sp. CF313]
gi|398082170|gb|EJL72929.1| Inosine-uridine nucleoside N-ribohydrolase [Variovorax sp. CF313]
Length = 362
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 60/138 (43%), Gaps = 24/138 (17%)
Query: 76 YAPLRQPTAQQVLINAISAGP---ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAI 132
+ PL A Q ++ + A P IT+ +G TNFA L + P +K I I VM G+
Sbjct: 146 HGPLMPTHAVQYIVETLRAAPPKSITLVGLGPLTNFAAALNSAPDIKPAIAEIVVMDGS- 204
Query: 133 RSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
GN+ P A FN+++DP AA V SG+PVT + DA
Sbjct: 205 ---------------WGVGGNI-----TPAATFNVYADPEAASIVFRSGVPVTAMSHDAA 244
Query: 193 KTIPVSENFFVEFERRQN 210
+ + V+ F N
Sbjct: 245 RRVLVTPERIAPFRAMGN 262
>gi|312950955|ref|ZP_07769865.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX0102]
gi|422692743|ref|ZP_16750758.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX0031]
gi|310631104|gb|EFQ14387.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX0102]
gi|315152202|gb|EFT96218.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX0031]
Length = 317
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 22/97 (22%)
Query: 96 PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY 155
P+T+ + + TN A+ L P +K+NI I +MGG++ GN
Sbjct: 131 PLTIVPIAALTNIALLLTLYPEVKENIAEIVMMGGSLAR-----------------GN-- 171
Query: 156 PDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
+N AEFN + DP AA V SG+P+T++ LD T
Sbjct: 172 ---TNTSAEFNTYVDPHAAQIVFQSGVPLTMVGLDVT 205
>gi|336326706|ref|YP_004606672.1| uridine preferring nucleoside hydrolase [Corynebacterium resistens
DSM 45100]
gi|336102688|gb|AEI10508.1| uridine preferring nucleoside hydrolase [Corynebacterium resistens
DSM 45100]
Length = 364
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 83/193 (43%), Gaps = 38/193 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI---SAGPITVFVMGSHTNFAIFLMN 114
++ GL LP+ G + L + A +++ I + G +T+ G+ TN A+F
Sbjct: 97 IHGESGLDGPRLPEAGVE---LEKQHAIELIAQVIEREAPGTVTLVPTGALTNIALFART 153
Query: 115 NPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAA 174
PHL + + + +MGG + GN+ P AEFNI +DP AA
Sbjct: 154 YPHLVERVAGVTLMGGGHHT-----------------GNM-----TPAAEFNILADPEAA 191
Query: 175 YTVLHSGIPVTIIPLDAT-KTIPVSENFFVEFERRQNTYEAQYC------FQSLKMIRDT 227
V + PVT++ LD T K + V E E R T AQ+ F + M
Sbjct: 192 KIVFEAAWPVTMVGLDVTHKVLAVPERM--EQIRAVGTDVAQFIAELVEFFGAAYMDLRR 249
Query: 228 WSGSPPFHEAYCM 240
+ G PP H+ +
Sbjct: 250 YPG-PPLHDPLAV 261
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 62/120 (51%), Gaps = 11/120 (9%)
Query: 541 ELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQII-GLQNSSSVIQDVYIVGGNKG 599
EL + A+++ ++E PG+ +T++ G LTN+A + + V ++GG
Sbjct: 114 ELEKQHAIELIAQVIEREAPGT-VTLVPTGALTNIALFARTYPHLVERVAGVTLMGGG-- 170
Query: 600 QDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLR 659
+ GN+ + AEFN+ DP AAK VFE+ + ++ L + +V + + + ++R
Sbjct: 171 --HHTGNM-----TPAAEFNILADPEAAKIVFEAAWPVTMVGLDVTHKVLAVPERMEQIR 223
>gi|381403235|ref|ZP_09927919.1| inosine-uridine preferring nucleoside hydrolase [Pantoea sp. Sc1]
gi|380736434|gb|EIB97497.1| inosine-uridine preferring nucleoside hydrolase [Pantoea sp. Sc1]
Length = 306
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 20/121 (16%)
Query: 80 RQPTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCF 137
+ P A Q +I+++ A P IT+ +G TN A + P + ++ + +MGGA F
Sbjct: 94 QAPGAVQFIIDSVRAQPHQITLVAIGPLTNIASAINQAPDIIPLVKELVIMGGA-----F 148
Query: 138 NSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPV 197
+ S GN+ P++EFNI+ DP AA VL S + V +IPLD T + +
Sbjct: 149 GTGGHS--------GNV-----TPFSEFNIWKDPHAADQVLTSALNVVVIPLDVTHKVLI 195
Query: 198 S 198
+
Sbjct: 196 T 196
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 77/148 (52%), Gaps = 12/148 (8%)
Query: 504 LDSDTLYGLARDLPRSPRR-YTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPG- 561
+D++ G AR L ++P T G + +N + + P AV + I++S+
Sbjct: 55 IDAEVYRGCARPLAQAPSAPATLHGQDGLGDAFENSCSD-QAPGAV---QFIIDSVRAQP 110
Query: 562 SKITILTNGPLTNLAQIIG-LQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNM 620
+IT++ GPLTN+A I + +++++ I+GG G GNV + ++EFN+
Sbjct: 111 HQITLVAIGPLTNIASAINQAPDIIPLVKELVIMGGAFGTGGHSGNV-----TPFSEFNI 165
Query: 621 FLDPLAAKAVFESKLEIKLIPLHMQRRV 648
+ DP AA V S L + +IPL + +V
Sbjct: 166 WKDPHAADQVLTSALNVVVIPLDVTHKV 193
>gi|410584215|ref|ZP_11321320.1| Inosine-uridine nucleoside N-ribohydrolase [Thermaerobacter
subterraneus DSM 13965]
gi|410505077|gb|EKP94587.1| Inosine-uridine nucleoside N-ribohydrolase [Thermaerobacter
subterraneus DSM 13965]
Length = 317
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 73/171 (42%), Gaps = 26/171 (15%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMN 114
YV+ G+ +F P+ ++ P A LI I A P +T+ TN A+ +
Sbjct: 81 YVHGRDGMGDSFFPRARQRPEPQH---AVDALIERIHAAPGELTILAQAPLTNIAVAVTR 137
Query: 115 NPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAA 174
+P + + ++ +Y+MGG P + P AE+N + DP AA
Sbjct: 138 DPSIARKVKTLYIMGGTY---------------------FAPGNITPAAEYNFYVDPEAA 176
Query: 175 YTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIR 225
V +G + ++ V ++ +E RR +T A++ Q +++R
Sbjct: 177 RIVFRAGFDIRLVDWGLCVRDTVLDDGDLEDIRRLDTELARFYLQVNRVVR 227
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 12/91 (13%)
Query: 553 SIVESIE--PGSKITILTNGPLTNLAQIIGLQNS-SSVIQDVYIVGGNKGQDNEKGNVFT 609
+++E I PG ++TIL PLTN+A + S + ++ +YI+GG GN+
Sbjct: 108 ALIERIHAAPG-ELTILAQAPLTNIAVAVTRDPSIARKVKTLYIMGGTY---FAPGNI-- 161
Query: 610 VPSSKYAEFNMFLDPLAAKAVFESKLEIKLI 640
+ AE+N ++DP AA+ VF + +I+L+
Sbjct: 162 ---TPAAEYNFYVDPEAARIVFRAGFDIRLV 189
>gi|417903714|ref|ZP_12547549.1| Inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus 21269]
gi|341849013|gb|EGS90166.1| Inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus 21269]
Length = 313
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 549 DVWKSIVESIEPGS-KITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNV 607
+ ++ I+++++ S K+T+L GPLT+LA+ LQ SS++Q + + G KGNV
Sbjct: 106 EAFEDIIQTLKRQSEKVTLLFTGPLTDLAK--ALQKDSSIVQYIEKLVWMGGTFLPKGNV 163
Query: 608 FTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
AE+N + DP A K VF+S +EI +I L +V
Sbjct: 164 EEPEHDGSAEWNAYWDPEAVKIVFDSDIEIDMIALESTNQV 204
>gi|336393552|ref|ZP_08574951.1| ribonucleoside hydrolase 1 [Lactobacillus coryniformis subsp.
torquens KCTC 3535]
gi|420146033|ref|ZP_14653474.1| Putative inosine-uridine nucleoside N-ribohydrolase [Lactobacillus
coryniformis subsp. coryniformis CECT 5711]
gi|398402287|gb|EJN55647.1| Putative inosine-uridine nucleoside N-ribohydrolase [Lactobacillus
coryniformis subsp. coryniformis CECT 5711]
Length = 311
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 67/153 (43%), Gaps = 30/153 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAG--PITVFVMGSHTNFAIFLMNN 115
V+ GL LP+ P+ A +++ + A P+T+ V G TN A+FL +
Sbjct: 81 VHGETGLDGTELPEPAFAAQPIP---AVELIAQTLRASDEPVTLVVTGPMTNAALFLSVH 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P LK + I MGGA+ +GN P EFN+F DP AA
Sbjct: 138 PELKDKLAQIVFMGGAM-----------------GLGNW-----TPQVEFNMFVDPEAAK 175
Query: 176 TVLHSGIPVTIIPLDAT---KTIPVSENFFVEF 205
V+ +G+P+ + LD T + +P F E
Sbjct: 176 LVIDTGVPLVMAGLDVTHKAQILPADVTAFREI 208
>gi|254555494|ref|YP_003061911.1| ribonucleoside hydrolase RihC [Lactobacillus plantarum JDM1]
gi|254044421|gb|ACT61214.1| ribonucleoside hydrolase RihC [Lactobacillus plantarum JDM1]
Length = 306
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 24/112 (21%)
Query: 83 TAQQVLINAISAG--PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNST 140
TA + L + I A PIT+ G++TN A+ P + +I+ I MGGA+ S
Sbjct: 102 TAVEALRDYIMAAEQPITLVPTGAYTNIALLFKTYPEVMPHIKEIVAMGGALGKGNMTSA 161
Query: 141 NSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
AEFN+F+DP AA + SG+P+T++ LD T
Sbjct: 162 ----------------------AEFNVFTDPHAAEIMYQSGVPITMVGLDVT 191
>gi|167768961|ref|ZP_02441014.1| hypothetical protein ANACOL_00278 [Anaerotruncus colihominis DSM
17241]
gi|167668601|gb|EDS12731.1| Inosine-uridine preferring nucleoside hydrolase [Anaerotruncus
colihominis DSM 17241]
Length = 316
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 81/183 (44%), Gaps = 38/183 (20%)
Query: 77 APLRQPTAQQVLINAISA--GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
+P+ A +I+ + A G I + G TN A+ L+ P L +NI+ ++++GG
Sbjct: 101 SPVENKHAVDAIIDIVMANSGEIEIVTCGPMTNLAMALLKEPKLAENIKKVWILGG---- 156
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDA--- 191
S S GN+ P AE+N++ DP AA VL +G+ + D
Sbjct: 157 ----SAGVS--------GNM-----TPTAEYNVYVDPEAADIVLDAGMDTVWVTWDTAVG 199
Query: 192 -TKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTW---SGSPPFHEAYCMWDSFMAG 247
T+ P VE ++ AQ+C + + +R+ + G P +Y + DS +
Sbjct: 200 ETEITPEE----VEMLLNSGSHTAQFCVRCTRKLREYYLSMYGRP----SYSVIDSLVMT 251
Query: 248 VAL 250
AL
Sbjct: 252 AAL 254
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 9/75 (12%)
Query: 563 KITILTNGPLTNLAQ-IIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMF 621
+I I+T GP+TNLA ++ + I+ V+I+GG+ G GN+ + AE+N++
Sbjct: 122 EIEIVTCGPMTNLAMALLKEPKLAENIKKVWILGGSAGV---SGNM-----TPTAEYNVY 173
Query: 622 LDPLAAKAVFESKLE 636
+DP AA V ++ ++
Sbjct: 174 VDPEAADIVLDAGMD 188
>gi|380031403|ref|YP_004888394.1| purine nucleosidase [Lactobacillus plantarum WCFS1]
gi|342240646|emb|CCC77880.1| purine nucleosidase [Lactobacillus plantarum WCFS1]
Length = 306
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 24/112 (21%)
Query: 83 TAQQVLINAISAG--PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNST 140
TA + L + I A PIT+ G++TN A+ P + +I+ I MGGA+ S
Sbjct: 102 TAVEALRDYIMAAEQPITLVPTGAYTNIALLFKTYPEVMPHIKEIVAMGGALGKGNMTSA 161
Query: 141 NSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
AEFN+F+DP AA + SG+P+T++ LD T
Sbjct: 162 ----------------------AEFNVFTDPHAAEIMYQSGVPITMVGLDVT 191
Score = 39.7 bits (91), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 66/132 (50%), Gaps = 19/132 (14%)
Query: 541 ELRQPL---AVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSV---IQDVYIV 594
+L +PL AV+ + + + E IT++ G TN+A + + V I+++ +
Sbjct: 94 DLAEPLPETAVEALRDYIMAAE--QPITLVPTGAYTNIALL--FKTYPEVMPHIKEIVAM 149
Query: 595 GGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKI 654
GG G KGN+ + AEFN+F DP AA+ +++S + I ++ L + + K
Sbjct: 150 GGALG----KGNM-----TSAAEFNVFTDPHAAEIMYQSGVPITMVGLDVTMKALLTRKS 200
Query: 655 LHKLRDRKKTPE 666
+ +L KT E
Sbjct: 201 IEQLPTLGKTGE 212
>gi|423207773|ref|ZP_17194329.1| hypothetical protein HMPREF1168_03964 [Aeromonas veronii AMC34]
gi|404620840|gb|EKB17737.1| hypothetical protein HMPREF1168_03964 [Aeromonas veronii AMC34]
Length = 317
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 66/143 (46%), Gaps = 23/143 (16%)
Query: 51 PVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGPITVFVMGSHTNFAI 110
P+ +++ + GL + G++ P+ A + + A S P+T+ +G TN A+
Sbjct: 86 PLDNASHIHGHSGLDGYEFAEPGQQPLPIHAVEAMKATLLA-SEQPMTLVPIGPLTNIAL 144
Query: 111 FLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSD 170
L +P ++ IE I +MGG S G + P AEFNI+ D
Sbjct: 145 LLTLHPECREKIERIVLMGG-------------------SAGR---GNHTPNAEFNIYVD 182
Query: 171 PFAAYTVLHSGIPVTIIPLDATK 193
P AA+ V SG+P+ + LD T
Sbjct: 183 PEAAHIVFSSGLPIVMCGLDVTS 205
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 64/126 (50%), Gaps = 15/126 (11%)
Query: 543 RQPL---AVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNK 598
+QPL AV+ K+ + + E +T++ GPLTN+A ++ L I+ + ++GG+
Sbjct: 109 QQPLPIHAVEAMKATLLASE--QPMTLVPIGPLTNIALLLTLHPECREKIERIVLMGGSA 166
Query: 599 GQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKL 658
G+ N N AEFN+++DP AA VF S L I + L + R +++ L
Sbjct: 167 GRGNHTPN---------AEFNIYVDPEAAHIVFSSGLPIVMCGLDVTSRATLTGEMIAAL 217
Query: 659 RDRKKT 664
+T
Sbjct: 218 PALNRT 223
>gi|308179496|ref|YP_003923624.1| ribonucleoside hydrolase RihC [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|308044987|gb|ADN97530.1| ribonucleoside hydrolase RihC [Lactobacillus plantarum subsp.
plantarum ST-III]
Length = 306
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 24/112 (21%)
Query: 83 TAQQVLINAISAG--PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNST 140
TA + L + I A PIT+ G++TN A+ P + +I+ I MGGA+ S
Sbjct: 102 TAVEALRDYIMAAEQPITLVPTGAYTNIALLFKTYPEVMPHIKEIVAMGGALGKGNMTSA 161
Query: 141 NSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
AEFN+F+DP AA + SG+P+T++ LD T
Sbjct: 162 ----------------------AEFNVFTDPHAAEIMYQSGVPITMVGLDVT 191
>gi|296110795|ref|YP_003621176.1| purine nucleosidase [Leuconostoc kimchii IMSNU 11154]
gi|339491970|ref|YP_004706475.1| ribonucleoside hydrolase RihC [Leuconostoc sp. C2]
gi|295832326|gb|ADG40207.1| purine nucleosidase [Leuconostoc kimchii IMSNU 11154]
gi|338853642|gb|AEJ31852.1| ribonucleoside hydrolase RihC [Leuconostoc sp. C2]
Length = 310
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 22/97 (22%)
Query: 96 PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY 155
P+T+ GS+TN A+ + +P L I+ +MGG++ S GN+
Sbjct: 117 PMTIVATGSYTNIALLIQKHPELLSKIKSFVLMGGSL-----------------SGGNV- 158
Query: 156 PDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
+ AEFN+F+DP AA V SG+P+ +I LD T
Sbjct: 159 ----SSVAEFNVFTDPDAASIVFKSGVPLVMIGLDVT 191
Score = 40.0 bits (92), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 18/143 (12%)
Query: 540 PELR-QPLAVDVWKSIVESIEPGSK-ITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGG 596
PE+ +PL D +++ + + + +TI+ G TN+A +I S I+ ++GG
Sbjct: 92 PEITTKPLTTDAIEAMAKVLSDAPEPMTIVATGSYTNIALLIQKHPELLSKIKSFVLMGG 151
Query: 597 NKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILH 656
+ GNV S AEFN+F DP AA VF+S + + +I L + + + +
Sbjct: 152 SL----SGGNV-----SSVAEFNVFTDPDAASIVFKSGVPLVMIGLDVTLKALLSLETID 202
Query: 657 KLRDRKKTPESVFSQRLLQGLMT 679
+ D + + +L LMT
Sbjct: 203 AVADLGE------AGNMLHKLMT 219
>gi|341820983|emb|CCC57308.1| purine nucleosidase [Weissella thailandensis fsh4-2]
Length = 313
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 564 ITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLD 623
+T++ GPL++LA+ L S+++ + V G N KGNV + E+N + D
Sbjct: 123 VTLVMTGPLSDLAR--ALDEEPSIVEKIESVHWMGGALNSKGNVAEPGADDTMEWNAYWD 180
Query: 624 PLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQS 683
A K V++S L+I ++ L +V + +LR R QR L + Q
Sbjct: 181 AEAVKKVWDSDLKIIMVGLDSTDQVP----LTAELRQRWA------KQRQHPALDLIGQG 230
Query: 684 H---HSYHHVDT-FLGEVLGAVILGGNPHLNQTYKIKSLEIISDGDISKVGQIIVNQEQG 739
+ HS+ T +L +VL + P L ++ ++K+ + + + Q ++G
Sbjct: 231 YSLVHSFEANSTYYLWDVL-TTLASAYPELVESVQVKTDVVTTGASEGRTYQT----DEG 285
Query: 740 KLVKVLESLNVAVYYDHFAEV--LGDHK 765
+ + + S+N +YD E+ LGD K
Sbjct: 286 REITFVTSVNAEAFYDKIDELAKLGDSK 313
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 75/179 (41%), Gaps = 27/179 (15%)
Query: 68 FLPQGGRKYAPLRQPTAQQVLINAISAG--PITVFVMGSHTNFAIFLMNNPHLKKNIEHI 125
L + G P+ T +I+ I + +T+ + G ++ A L P + + IE +
Sbjct: 92 ILNEHGEPKTPVAAKTGHLDMIDKIKSADDSVTLVMTGPLSDLARALDEEPSIVEKIESV 151
Query: 126 YVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVT 185
+ MGGA+ S GN+ ++ E+N + D A V S + +
Sbjct: 152 HWMGGALNSK----------------GNVAEPGADDTMEWNAYWDAEAVKKVWDSDLKII 195
Query: 186 IIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPF--HEAYCMWD 242
++ LD+T +P++ E +R + Q +L +I +S F + Y +WD
Sbjct: 196 MVGLDSTDQVPLT----AELRQR---WAKQRQHPALDLIGQGYSLVHSFEANSTYYLWD 247
>gi|384548492|ref|YP_005737745.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus ED133]
gi|298695541|gb|ADI98763.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus subsp. aureus ED133]
Length = 289
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 63/116 (54%), Gaps = 3/116 (2%)
Query: 549 DVWKSIVESIEPGS-KITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNV 607
+ ++ I+++++ S K+T+L GPLT+LA+ LQ SS++Q + + G KGNV
Sbjct: 82 EAFEDIIQTLKRQSEKVTLLFTGPLTDLAK--ALQKDSSIVQYIEKLVWMGGTFLPKGNV 139
Query: 608 FTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKK 663
AE+N + DP A K VF+S +EI +I L +V + + + ++
Sbjct: 140 EEPEHDGSAEWNAYWDPEAVKIVFDSDIEIDMIALESTNQVPLTLDVRQRWANERQ 195
>gi|254418700|ref|ZP_05032424.1| Inosine-uridine preferring nucleoside hydrolase superfamily
[Brevundimonas sp. BAL3]
gi|196184877|gb|EDX79853.1| Inosine-uridine preferring nucleoside hydrolase superfamily
[Brevundimonas sp. BAL3]
Length = 311
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 65/153 (42%), Gaps = 25/153 (16%)
Query: 88 LINAISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQ 147
L+ AG + V V+G TN A+ + L +++ + VMGGA RS+ N T S
Sbjct: 112 LVMKRPAGSVAVAVLGPMTNLALAMKRERRLAEHLGPVVVMGGA-RSEGGNITAS----- 165
Query: 148 CDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFER 207
AEFNI++DP AA V SG V LDAT + +E E
Sbjct: 166 ---------------AEFNIWADPDAAAVVFGSGCEVIAFGLDATHQVRATEARIRAVET 210
Query: 208 RQN----TYEAQYCFQSLKMIRDTWSGSPPFHE 236
+ T A F + T + +PP H+
Sbjct: 211 IRTDPARTVAALLRFSQRVERQATGADAPPLHD 243
>gi|88855136|ref|ZP_01129801.1| putative nucleoside hydrolase [marine actinobacterium PHSC20C1]
gi|88815664|gb|EAR25521.1| putative nucleoside hydrolase [marine actinobacterium PHSC20C1]
Length = 318
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 62/136 (45%), Gaps = 27/136 (19%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMN 114
+V+ GL LP+ R PL A ++L I A P +T+ + TN A+ +
Sbjct: 79 HVHGTDGLADLGLPESARTVLPLH---AVELLRREILASPTPVTLVPLAPMTNIALLVRM 135
Query: 115 NPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAA 174
P + N+E I MGG+ S+GN + AEFN + DP AA
Sbjct: 136 YPEVLSNVERIVFMGGSA-----------------SVGN-----ATAVAEFNTWHDPEAA 173
Query: 175 YTVLHSGIPVTIIPLD 190
VL +G+P+T+ LD
Sbjct: 174 EIVLSAGVPITMYGLD 189
>gi|322835395|ref|YP_004215421.1| inosine/uridine-preferring nucleoside hydrolase [Rahnella sp.
Y9602]
gi|321170596|gb|ADW76294.1| Inosine/uridine-preferring nucleoside hydrolase [Rahnella sp.
Y9602]
Length = 316
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 25/145 (17%)
Query: 96 PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY 155
P+T+ V+G TN A L P + + I + +MGGA R + N T +S
Sbjct: 121 PLTLCVLGPLTNLATALRMKPGITEGIGRVVLMGGAYR-EAGNRTMTS------------ 167
Query: 156 PDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQ 215
EFN+ +DP AA+ V S + +T++PLDAT + ++ +F + Q
Sbjct: 168 --------EFNMLADPHAAHIVFSSDLNITVLPLDATHQVILTPEHVAKFIKVSGRISVQ 219
Query: 216 Y----CFQSLKMIRDTWSGSPPFHE 236
F +R S P H+
Sbjct: 220 LGELMAFWDRNDVRRYGSRGGPLHD 244
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 89/216 (41%), Gaps = 39/216 (18%)
Query: 466 DIPVGLGDVFAV--GEVNPKFPPIGGCKYAKAIPLGS-----------GGFLDSDTLYGL 512
D G+ D A+ V P+ +G C PL + G LD G
Sbjct: 9 DCDPGIDDAIALLSAFVAPQLNILGICTVCGNQPLANTTRNALQITELGYRLDIPVFAGC 68
Query: 513 ARDLPRSP--RRYTAENSV---RFGASQDNDDPELRQPLAVDVWKSIVE-SIEPGSKITI 566
+ L R+P ++ EN + F A Q D AV+ S E +IE +T+
Sbjct: 69 HQPLLRAPIHGQFHGENGLGNTTFPAPQKQADAVH----AVNFLISRCEQAIEHNQPLTL 124
Query: 567 LTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPL 625
GPLTNLA + ++ + I V ++GG E GN + +EFNM DP
Sbjct: 125 CVLGPLTNLATALRMKPGITEGIGRVVLMGGAY---REAGN-----RTMTSEFNMLADPH 176
Query: 626 AAKAVFESKLEIKLIPLHMQRR-------VASFFKI 654
AA VF S L I ++PL + VA F K+
Sbjct: 177 AAHIVFSSDLNITVLPLDATHQVILTPEHVAKFIKV 212
>gi|418273988|ref|ZP_12889570.1| purine nucleosidase [Lactobacillus plantarum subsp. plantarum NC8]
gi|376010694|gb|EHS84019.1| purine nucleosidase [Lactobacillus plantarum subsp. plantarum NC8]
Length = 306
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 24/112 (21%)
Query: 83 TAQQVLINAISAG--PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNST 140
TA + L + I A PIT+ G++TN A+ P + +I+ I MGGA+ S
Sbjct: 102 TAVEALRDYIMAAEQPITLVPTGAYTNIALLFKTYPEVMPHIKEIVAMGGALGKGNMTSA 161
Query: 141 NSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
AEFN+F+DP AA + SG+P+T++ LD T
Sbjct: 162 ----------------------AEFNVFTDPHAAEIMYQSGVPITMVGLDVT 191
>gi|262275413|ref|ZP_06053223.1| inosine-uridine preferring nucleoside hydrolase [Grimontia hollisae
CIP 101886]
gi|262220658|gb|EEY71973.1| inosine-uridine preferring nucleoside hydrolase [Grimontia hollisae
CIP 101886]
Length = 320
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 59/121 (48%), Gaps = 20/121 (16%)
Query: 84 AQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTN 141
A Q +I+ + A P IT+ +G TN A+ L + P + ++ + +MGGA +
Sbjct: 104 AYQYIIDTVKASPGDITLVAVGPLTNLALALEHAPEITGLVKEVVIMGGAFGTH------ 157
Query: 142 SSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENF 201
+ GN+ PYAE NI DP AA VL + PVT+I LD T+ S ++
Sbjct: 158 -------EHTGNV-----TPYAEANIHDDPHAADIVLTAHWPVTVIGLDVTEECLFSLDY 205
Query: 202 F 202
Sbjct: 206 I 206
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 61/115 (53%), Gaps = 13/115 (11%)
Query: 551 WKSIVESIE--PGSKITILTNGPLTNLAQIIGLQNS---SSVIQDVYIVGGNKGQDNEKG 605
++ I+++++ PG IT++ GPLTNLA + L+++ + ++++V I+GG G G
Sbjct: 105 YQYIIDTVKASPGD-ITLVAVGPLTNLA--LALEHAPEITGLVKEVVIMGGAFGTHEHTG 161
Query: 606 NVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRD 660
NV + YAE N+ DP AA V + + +I L + + LRD
Sbjct: 162 NV-----TPYAEANIHDDPHAADIVLTAHWPVTVIGLDVTEECLFSLDYIDTLRD 211
>gi|84502995|ref|ZP_01001097.1| inosine-uridine preferring nucleoside hydrolase [Oceanicola
batsensis HTCC2597]
gi|84388740|gb|EAQ01611.1| inosine-uridine preferring nucleoside hydrolase [Oceanicola
batsensis HTCC2597]
Length = 312
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 63/139 (45%), Gaps = 27/139 (19%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAIS---AGPITVFVMGSHTNFAIFLM 113
+V+ GL LP PL+ A +I+ + AG +T+ +G TN A
Sbjct: 81 HVHGQTGLNGPELPD---PTMPLQDGHAVDFIIDTLRTEPAGTVTLCPLGPLTNIATAFR 137
Query: 114 NNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFA 173
P + + ++ I +MGGA +GN+ P AEFNI+ DP A
Sbjct: 138 RAPDIVERVQEIVLMGGAYFE----------------VGNI-----TPTAEFNIYVDPAA 176
Query: 174 AYTVLHSGIPVTIIPLDAT 192
A V +G+P+ ++PLD T
Sbjct: 177 ASEVFAAGVPLVVMPLDVT 195
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 559 EPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEF 618
EP +T+ GPLTN+A + + +++ V + G E GN+ + AEF
Sbjct: 116 EPAGTVTLCPLGPLTNIAT--AFRRAPDIVERVQEIVLMGGAYFEVGNI-----TPTAEF 168
Query: 619 NMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
N+++DP AA VF + + + ++PL + +
Sbjct: 169 NIYVDPAAASEVFAAGVPLVVMPLDVTHK 197
>gi|448728544|ref|ZP_21710868.1| inosine/uridine-preferring nucleoside hydrolase [Halococcus
saccharolyticus DSM 5350]
gi|445796729|gb|EMA47226.1| inosine/uridine-preferring nucleoside hydrolase [Halococcus
saccharolyticus DSM 5350]
Length = 307
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 63/151 (41%), Gaps = 28/151 (18%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
+T+ +G TN A + + L ++ IY+MGGA L P
Sbjct: 118 LTIVAIGPQTNLATAIAIDEDLPATVDDIYLMGGA---------------------ALCP 156
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK--TIPVS--ENFFVEFERRQNTY 212
+ P AEFN + DP A V P ++ LD T+ TIPV+ E E E Q T
Sbjct: 157 GNVTPAAEFNFYVDPEAVSRVFRGATP-KVVGLDVTEAATIPVATIEELVAEDE-PQRTL 214
Query: 213 EAQYCFQSLKMIRD-TWSGSPPFHEAYCMWD 242
A + + IRD +G H+A + D
Sbjct: 215 GAWLGYSEIDAIRDGALAGDQAIHDATVIVD 245
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 9/74 (12%)
Query: 559 EPGSKITILTNGPLTNLAQIIGL-QNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAE 617
E G +TI+ GP TNLA I + ++ + + D+Y++GG GNV + AE
Sbjct: 113 EYGDDLTIVAIGPQTNLATAIAIDEDLPATVDDIYLMGGAALC---PGNV-----TPAAE 164
Query: 618 FNMFLDPLAAKAVF 631
FN ++DP A VF
Sbjct: 165 FNFYVDPEAVSRVF 178
>gi|422708744|ref|ZP_16766272.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX0027]
gi|315036729|gb|EFT48661.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX0027]
Length = 317
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 31/121 (25%)
Query: 81 QPTAQQVLINAISAG---------PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGA 131
QP + + I+A+ A P+T+ + + TN A+ L P +K+NI I +MGG+
Sbjct: 107 QPISTCLDIHAVEAMRKEILSSDVPLTIVPIAALTNIALLLTLYPEVKENIAEIVMMGGS 166
Query: 132 IRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDA 191
+ GN +N AEFN + DP AA V SG+P+T++ LD
Sbjct: 167 LAR-----------------GN-----TNTSAEFNTYVDPHAAQIVFQSGVPLTMVGLDV 204
Query: 192 T 192
T
Sbjct: 205 T 205
>gi|444378288|ref|ZP_21177490.1| Inosine-uridine preferring nucleoside hydrolase [Enterovibrio sp.
AK16]
gi|443677714|gb|ELT84393.1| Inosine-uridine preferring nucleoside hydrolase [Enterovibrio sp.
AK16]
Length = 320
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 72/163 (44%), Gaps = 28/163 (17%)
Query: 42 GECRYRQAIPVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITV 99
G + Q PVG + V+ G + P +P A Q +I+ ++A P +T+
Sbjct: 65 GASKPLQRPPVGASVAVHGENGFGDVAIEAPTISADP--RP-AHQYIIDTVTASPGEVTL 121
Query: 100 FVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDS 159
+G TN A+ L P + K ++ + +MGGA TN GN+
Sbjct: 122 VAVGPLTNLAMALKQAPEITKLVKEVVIMGGAF------GTNGHT-------GNV----- 163
Query: 160 NPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFF 202
P+AE N+ DP AA V + PVT+I LD T E FF
Sbjct: 164 TPFAEANVHDDPHAADIVFTADWPVTVIGLDVTH-----EAFF 201
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 13/99 (13%)
Query: 557 SIEPGSKITILTNGPLTNLAQIIGLQNS---SSVIQDVYIVGGNKGQDNEKGNVFTVPSS 613
+ PG ++T++ GPLTNLA + L+ + + ++++V I+GG G + GNV +
Sbjct: 113 TASPG-EVTLVAVGPLTNLA--MALKQAPEITKLVKEVVIMGGAFGTNGHTGNV-----T 164
Query: 614 KYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFF 652
+AE N+ DP AA VF + + +I L + +FF
Sbjct: 165 PFAEANVHDDPHAADIVFTADWPVTVIGLDVTHE--AFF 201
>gi|387781244|ref|YP_005756042.1| putative inosine-uridine preferring nucleoside hydrolase
[Staphylococcus aureus subsp. aureus LGA251]
gi|344178346|emb|CCC88832.1| putative inosine-uridine preferring nucleoside hydrolase
[Staphylococcus aureus subsp. aureus LGA251]
Length = 313
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 549 DVWKSIVESIEPGS-KITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNV 607
+ ++ I+++++ S K+T+L GPLT+LA+ LQ SS++Q + + G KGNV
Sbjct: 106 EAFEDIIQTLKRQSEKVTLLFTGPLTDLAK--ALQKDSSIVQYIEKLVWMGGTFLPKGNV 163
Query: 608 FTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
AE+N + DP A K VF+S +EI +I L +V
Sbjct: 164 EEPEHDGSAEWNAYWDPEAVKIVFDSDIEIDMIALESTNQV 204
>gi|300781474|ref|ZP_07091328.1| inosine-uridine nucleoside N-ribohydrolase [Corynebacterium
genitalium ATCC 33030]
gi|300533181|gb|EFK54242.1| inosine-uridine nucleoside N-ribohydrolase [Corynebacterium
genitalium ATCC 33030]
Length = 331
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 59/126 (46%), Gaps = 26/126 (20%)
Query: 73 GRKYAPLR--QPTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVM 128
G AP R + + I+AI G + + V G TN A F +P K ++HI VM
Sbjct: 89 GYATAPERHIESDWDMLWIDAIERGTDDLHLIVSGPMTNLAAFARLHPEHYKKLKHITVM 148
Query: 129 GGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSG-IPVTII 187
GGA FN YP ++ P AE+N + DP AA V S +P+T+
Sbjct: 149 GGA-----FN----------------YPGNTTPTAEWNFWVDPHAAKEVFDSAPVPITLC 187
Query: 188 PLDATK 193
PL+ T+
Sbjct: 188 PLNVTE 193
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 56/97 (57%), Gaps = 11/97 (11%)
Query: 555 VESIEPGSK-ITILTNGPLTNLAQIIGLQ-NSSSVIQDVYIVGGNKGQDNEKGNVFTVPS 612
+++IE G+ + ++ +GP+TNLA L ++ + ++GG N GN T P+
Sbjct: 107 IDAIERGTDDLHLIVSGPMTNLAAFARLHPEHYKKLKHITVMGGAF---NYPGN--TTPT 161
Query: 613 SKYAEFNMFLDPLAAKAVFESK-LEIKLIPLHMQRRV 648
AE+N ++DP AAK VF+S + I L PL++ R+
Sbjct: 162 ---AEWNFWVDPHAAKEVFDSAPVPITLCPLNVTERM 195
>gi|82751871|ref|YP_417612.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus RF122]
gi|82657402|emb|CAI81844.1| inosine-uridine preferring nucleoside hydrolase [Staphylococcus
aureus RF122]
Length = 313
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 549 DVWKSIVESIEPGS-KITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNV 607
+ ++ I+++++ S K+T+L GPLT+LA+ LQ SS++Q + + G KGNV
Sbjct: 106 EAFEDIIQTLKRQSEKVTLLFTGPLTDLAK--ALQKDSSIVQYIEKLVWMGGTFLSKGNV 163
Query: 608 FTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
AE+N + DP A K VF+S +EI ++ L +V
Sbjct: 164 EEPEHDGSAEWNAYWDPEAVKIVFDSDIEIDMVALESTNQV 204
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 64/151 (42%), Gaps = 28/151 (18%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
+T+ G T+ A L + + + IE + MGG S GN+
Sbjct: 122 VTLLFTGPLTDLAKALQKDSSIVQYIEKLVWMGGTFLSK----------------GNVEE 165
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQY 216
+ + AE+N + DP A V S I + ++ L++T +P++ + R++ E QY
Sbjct: 166 PEHDGSAEWNAYWDPEAVKIVFDSDIEIDMVALESTNQVPLTLDV-----RQRWANERQY 220
Query: 217 CFQSLKMIRDTWSGSPPF-----HEAYCMWD 242
+ + +++ PP + Y +WD
Sbjct: 221 T--GIDFLGVSYAAVPPLTHFITNSTYFLWD 249
>gi|288937220|ref|YP_003441279.1| inosine/uridine-preferring nucleoside hydrolase [Klebsiella
variicola At-22]
gi|288891929|gb|ADC60247.1| Inosine/uridine-preferring nucleoside hydrolase [Klebsiella
variicola At-22]
Length = 304
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 70/135 (51%), Gaps = 16/135 (11%)
Query: 543 RQPLAVDVWKSIVESIEPGSK-ITILTNGPLTNLAQIIGLQNSSSV--IQDVYIVGGNKG 599
RQPLA +++I +++ ++ IT++ GPLTN+A ++ Q V I+ + I+GG+ G
Sbjct: 96 RQPLAKPAFQAIRDALMHAAEPITLVAIGPLTNIALLLT-QYPECVFNIRRLVIMGGSAG 154
Query: 600 QDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR---VASFFKILH 656
+ N N AEFN+ +DP AA VF S L+I + L + R A + L
Sbjct: 155 RGNFTPN---------AEFNIAIDPEAAAKVFHSGLDIVMCGLDVTNRALLAADYLATLP 205
Query: 657 KLRDRKKTPESVFSQ 671
L K ++FS
Sbjct: 206 TLNQTGKMLHALFSH 220
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 60/137 (43%), Gaps = 27/137 (19%)
Query: 80 RQPTAQ---QVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRS 134
RQP A+ Q + +A+ +A PIT+ +G TN A+ L P NI + +MGG+
Sbjct: 96 RQPLAKPAFQAIRDALMHAAEPITLVAIGPLTNIALLLTQYPECVFNIRRLVIMGGSAGR 155
Query: 135 DCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKT 194
GN P+ AEFNI DP AA V HSG+ + + LD T
Sbjct: 156 -----------------GNFTPN-----AEFNIAIDPEAAAKVFHSGLDIVMCGLDVTNR 193
Query: 195 IPVSENFFVEFERRQNT 211
++ ++ T
Sbjct: 194 ALLAADYLATLPTLNQT 210
>gi|300767018|ref|ZP_07076931.1| cytidine/uridine-specific hydrolase [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|300495556|gb|EFK30711.1| cytidine/uridine-specific hydrolase [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
Length = 308
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 24/112 (21%)
Query: 83 TAQQVLINAISAG--PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNST 140
TA + L + I A PIT+ G++TN A+ P + +I+ I MGGA+ S
Sbjct: 104 TAVEALRDYIMAAEQPITLVPTGAYTNIALLFKTYPEVMPHIKEIVAMGGALGKGNMTSA 163
Query: 141 NSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
AEFN+F+DP AA + SG+P+T++ LD T
Sbjct: 164 ----------------------AEFNVFTDPHAAEIMYQSGVPITMVGLDVT 193
>gi|448820075|ref|YP_007413237.1| Ribonucleoside hydrolase RihC [Lactobacillus plantarum ZJ316]
gi|448273572|gb|AGE38091.1| Ribonucleoside hydrolase RihC [Lactobacillus plantarum ZJ316]
Length = 308
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 24/112 (21%)
Query: 83 TAQQVLINAISAG--PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNST 140
TA + L + I A PIT+ G++TN A+ P + +I+ I MGGA+ S
Sbjct: 104 TAVEALRDYIMAAEQPITLVPTGAYTNIALLFKTYPEVMPHIKEIVAMGGALGKGNMTSA 163
Query: 141 NSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
AEFN+F+DP AA + SG+P+T++ LD T
Sbjct: 164 ----------------------AEFNVFTDPHAAEIMYQSGVPITMVGLDVT 193
>gi|326514768|dbj|BAJ99745.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326526085|dbj|BAJ93219.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 324
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 27/181 (14%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISA--GPITVFVMGSHTNFAIFLMN 114
+V+ + GL LP K + +A + ++N +S G I+V +G TN A+ +
Sbjct: 88 FVHGSDGLGNLSLPAPTSKKV---EESAAEFMVNKVSQFPGEISVLALGPLTNVALAIKR 144
Query: 115 NPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAA 174
+ ++ I V+GGA + GN+ NP AE NI+ DP AA
Sbjct: 145 DSSFASKVKKIVVLGGAFFA----------------AGNV-----NPAAEANIYGDPDAA 183
Query: 175 YTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPF 234
V SG + ++ ++ T ++ +E + + + AQ+ K RD + S F
Sbjct: 184 DVVFTSGAAIDVVGINITTQCCFTDEDLLELKNSKGVH-AQFLCDMCKFYRDWHAKSDSF 242
Query: 235 H 235
H
Sbjct: 243 H 243
>gi|222083056|ref|YP_002542421.1| inosine-uridine preferring nucleoside hydrolase protein
[Agrobacterium radiobacter K84]
gi|221727735|gb|ACM30824.1| inosine-uridine preferring nucleoside hydrolase protein
[Agrobacterium radiobacter K84]
Length = 332
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 69/160 (43%), Gaps = 28/160 (17%)
Query: 83 TAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNST 140
A + +I+ + A P +T+ +G TN A+ L P + I+++ VMGGA N
Sbjct: 114 AAHRFIIDTVRANPGEVTLLAVGRMTNLALALREAPDIASLIKNVVVMGGAFSLSGHN-- 171
Query: 141 NSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSEN 200
GN+ P AE N+ DP AA V + PVT I LD T+ + +
Sbjct: 172 -----------GNV-----TPVAEANMIGDPLAADEVFGASWPVTAIGLDVTRQVVMGP- 214
Query: 201 FFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPFHEAYCM 240
E R A Y ++ + I +T G FH + +
Sbjct: 215 --AELSRL-----AAYGGEAGRFIVETSRGYRAFHAQFGI 247
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 16/113 (14%)
Query: 539 DPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS---SSVIQDVYIVG 595
DP +D ++ PG ++T+L G +TNLA + L+ + +S+I++V ++G
Sbjct: 111 DPRAAHRFIIDTVRA-----NPG-EVTLLAVGRMTNLA--LALREAPDIASLIKNVVVMG 162
Query: 596 GNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
G GNV V AE NM DPLAA VF + + I L + R+V
Sbjct: 163 GAFSLSGHNGNVTPV-----AEANMIGDPLAADEVFGASWPVTAIGLDVTRQV 210
>gi|269925686|ref|YP_003322309.1| inosine/uridine-preferring nucleoside hydrolase [Thermobaculum
terrenum ATCC BAA-798]
gi|269789346|gb|ACZ41487.1| Inosine/uridine-preferring nucleoside hydrolase [Thermobaculum
terrenum ATCC BAA-798]
Length = 322
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 100/262 (38%), Gaps = 79/262 (30%)
Query: 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQRLYVNT 60
+MNR DIPV VG +P+I P+ +V+
Sbjct: 53 VMNRTDIPVAVGAP----------------KPMIR---------------PLSMAKFVHG 81
Query: 61 NYGLRKA-FLPQGGRKYAPLRQPTAQQVL-INAISAGPITVFVMGSHTNFAIFLMNNPHL 118
GL A F P G P + A Q++ + + G IT+ G TN AI L+ P L
Sbjct: 82 EDGLGNANFAPSG---LVPSDEHAADQIIRLARENPGEITLITTGPLTNAAIALLKEPKL 138
Query: 119 KKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVL 178
+ I H+ VMGG + +P + P +E NI DP AA V
Sbjct: 139 PQLIPHVVVMGGTVE---------------------HPGNVGPVSEANIAHDPEAAQIVF 177
Query: 179 HSGIPVTIIPLDAT-KTIPVSENF---------FVEFERRQNTYEAQYCFQSLKMIRDTW 228
+ VT++ LD T KT+ + ++ E+ R + Q+ QSL
Sbjct: 178 SAPWKVTMVGLDVTMKTLLLEQHLDAWKQARTPLTEWLLRIVPFYMQFYSQSLG------ 231
Query: 229 SGSPPFHEAYCMWDSFMAGVAL 250
+ A M D+ G+A+
Sbjct: 232 ------YMACAMHDALAVGIAV 247
>gi|326692160|ref|ZP_08229165.1| ribonucleoside hydrolase RihC [Leuconostoc argentinum KCTC 3773]
Length = 317
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 59/121 (48%), Gaps = 31/121 (25%)
Query: 81 QPTAQQVLINAISA---------GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGA 131
+PT + V ++A+ A IT+ +G++TN A+ L + P + I I VMGG+
Sbjct: 96 EPTTKTVSLSAVEAMRATLLASDEKITLVAVGAYTNIAMLLQSYPEVTDKIARIVVMGGS 155
Query: 132 IRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDA 191
+ S GN+ AEFN+F+DP AA V +SG+ V +I LD
Sbjct: 156 L-----------------SGGNM-----TSVAEFNVFTDPDAAKIVFNSGLDVIMIGLDV 193
Query: 192 T 192
T
Sbjct: 194 T 194
Score = 42.7 bits (99), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 14/107 (13%)
Query: 563 KITILTNGPLTNLAQIIGLQNSSSV---IQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFN 619
KIT++ G TN+A + LQ+ V I + ++GG+ GN+ +V AEFN
Sbjct: 120 KITLVAVGAYTNIAML--LQSYPEVTDKIARIVVMGGSL----SGGNMTSV-----AEFN 168
Query: 620 MFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPE 666
+F DP AAK VF S L++ +I L + + + + L KT E
Sbjct: 169 VFTDPDAAKIVFNSGLDVIMIGLDVTLKALLTAESMATLAAMNKTGE 215
>gi|302379405|ref|ZP_07267892.1| inosine-uridine preferring nucleoside hydrolase [Finegoldia magna
ACS-171-V-Col3]
gi|302312750|gb|EFK94744.1| inosine-uridine preferring nucleoside hydrolase [Finegoldia magna
ACS-171-V-Col3]
Length = 300
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 77/142 (54%), Gaps = 13/142 (9%)
Query: 535 QDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQII-GLQNSSSVIQDVYI 593
+ +D EL +V + I++ + KITI+ GPLTN+A ++ I+ + I
Sbjct: 92 ESDDVGELSSENSVTMMHEIIQ--KSTEKITIIAVGPLTNIALLLRTFPEDKEKIEQISI 149
Query: 594 VGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFK 653
+GG+ +GNV + +EFN F+DP AAK VFES +++ + L++ ++ AS +
Sbjct: 150 MGGSIT----RGNV-----TSLSEFNFFVDPEAAKIVFESGVKLIMAGLNITQK-ASITE 199
Query: 654 ILHKLRDRKKTPESVFSQRLLQ 675
+ D +T + F+ R+L+
Sbjct: 200 EQIQFLDTIETKRTKFAHRILK 221
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 23/130 (17%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
S IT+ +G TN A+ L P K+ IE I +MGG+I G
Sbjct: 115 STEKITIIAVGPLTNIALLLRTFPEDKEKIEQISIMGGSITR-----------------G 157
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTY 212
N+ +EFN F DP AA V SG+ + + L+ T+ ++E ++F T
Sbjct: 158 NV-----TSLSEFNFFVDPEAAKIVFESGVKLIMAGLNITQKASITEE-QIQFLDTIETK 211
Query: 213 EAQYCFQSLK 222
++ + LK
Sbjct: 212 RTKFAHRILK 221
>gi|350532006|ref|ZP_08910947.1| hypothetical protein VrotD_12803 [Vibrio rotiferianus DAT722]
Length = 322
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 69/154 (44%), Gaps = 27/154 (17%)
Query: 51 PVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNF 108
PVG + V+ G P + + P A Q +I+++ A P IT+ +G TN
Sbjct: 74 PVGATVVVHGEAGFGDVKAPSS-LDVSAIDTP-AYQYIIDSVRAEPGEITLVAVGPLTNL 131
Query: 109 AIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIF 168
A+ L +P + ++ + VMGGA + D GN+ PYAE NI
Sbjct: 132 ALALEADPEIVNLVKEVVVMGGAFGEN-------------DHRGNV-----TPYAEANIH 173
Query: 169 SDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFF 202
DP AA V + P II LD T+ E+FF
Sbjct: 174 DDPHAADKVFTASWPFVIIGLDVTE-----ESFF 202
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 76/134 (56%), Gaps = 24/134 (17%)
Query: 541 ELRQPLAVDV-------WKSIVESI--EPGSKITILTNGPLTNLAQIIGLQNSSSVI--- 588
+++ P ++DV ++ I++S+ EPG +IT++ GPLTNLA + L+ ++
Sbjct: 89 DVKAPSSLDVSAIDTPAYQYIIDSVRAEPG-EITLVAVGPLTNLA--LALEADPEIVNLV 145
Query: 589 QDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
++V ++GG G+++ +GNV + YAE N+ DP AA VF + +I L +
Sbjct: 146 KEVVVMGGAFGENDHRGNV-----TPYAEANIHDDPHAADKVFTASWPFVIIGLDVTEE- 199
Query: 649 ASFF--KILHKLRD 660
SFF + L +LR+
Sbjct: 200 -SFFTGQYLDQLRE 212
>gi|417536356|ref|ZP_12189540.1| Inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Wandsworth str. A4-580]
gi|353670517|gb|EHD07092.1| Inosine-uridine preferring nucleoside hydrolase [Salmonella
enterica subsp. enterica serovar Wandsworth str. A4-580]
Length = 219
Score = 55.5 bits (132), Expect = 1e-04, Method: Composition-based stats.
Identities = 42/130 (32%), Positives = 58/130 (44%), Gaps = 31/130 (23%)
Query: 80 RQPTAQ-------QVLINAISAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAI 132
RQP A+ VL+NA P+T+ +G TN A+ LM+ P NI + +MGG+
Sbjct: 11 RQPLAKPAFIAIRDVLMNAPE--PMTLVAIGPLTNIALLLMHYPECACNIRRLVLMGGSA 68
Query: 133 RSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
GN P+ AEFNI DP AA V SG+ + + LD T
Sbjct: 69 GR-----------------GNFTPN-----AEFNIAVDPEAAALVFRSGLEIVMCGLDVT 106
Query: 193 KTIPVSENFF 202
+S +F
Sbjct: 107 NQAMLSPDFL 116
Score = 47.0 bits (110), Expect = 0.043, Method: Composition-based stats.
Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 17/133 (12%)
Query: 543 RQPLA----VDVWKSIVESIEPGSKITILTNGPLTNLAQII-GLQNSSSVIQDVYIVGGN 597
RQPLA + + ++ + EP +T++ GPLTN+A ++ + I+ + ++GG+
Sbjct: 11 RQPLAKPAFIAIRDVLMNAPEP---MTLVAIGPLTNIALLLMHYPECACNIRRLVLMGGS 67
Query: 598 KGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHK 657
G+ N N AEFN+ +DP AA VF S LEI + L + + L+K
Sbjct: 68 AGRGNFTPN---------AEFNIAVDPEAAALVFRSGLEIVMCGLDVTNQAMLSPDFLNK 118
Query: 658 LRDRKKTPESVFS 670
L +T + + S
Sbjct: 119 LPALNRTGKMLHS 131
>gi|422696854|ref|ZP_16754804.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX1346]
gi|315174585|gb|EFU18602.1| inosine-uridine preferring nucleoside hydrolase [Enterococcus
faecalis TX1346]
Length = 313
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 46/96 (47%), Gaps = 22/96 (22%)
Query: 98 TVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPD 157
T+ +G TN A+ L P +K+ IE I +MGG + S GN
Sbjct: 121 TIIALGPLTNIALLLKAYPEIKEKIECISLMGGGL-----------------SHGN---- 159
Query: 158 DSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK 193
S P AEFNIF DP AA V S IP+ + LD T+
Sbjct: 160 -STPLAEFNIFVDPEAAQIVFQSEIPIIMAGLDVTE 194
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 93/190 (48%), Gaps = 20/190 (10%)
Query: 535 QDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQII-GLQNSSSVIQDVYI 593
++N+ P + Q ++K ++ ++E + TI+ GPLTN+A ++ I+ + +
Sbjct: 94 KENNYPIIEQSAISYMYKQLI-NLEQSA--TIIALGPLTNIALLLKAYPEIKEKIECISL 150
Query: 594 VGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFK 653
+GG N S+ AEFN+F+DP AA+ VF+S++ I + L + +
Sbjct: 151 MGGGLSHGN---------STPLAEFNIFVDPEAAQIVFQSEIPIIMAGLDVTEKAEIQLS 201
Query: 654 ILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGGNPHLNQTY 713
+ KL+ R V SQ + L QS + +++ L + L AV P L Q
Sbjct: 202 EIDKLKGR-----GVVSQLAYELLHFYNQSGRQFGFINSPLHD-LCAVAYLLKPELFQG- 254
Query: 714 KIKSLEIISD 723
+ K++ +I+D
Sbjct: 255 EYKAVNVITD 264
>gi|227514196|ref|ZP_03944245.1| possible ribosylpyrimidine nucleosidase [Lactobacillus fermentum
ATCC 14931]
gi|227087428|gb|EEI22740.1| possible ribosylpyrimidine nucleosidase [Lactobacillus fermentum
ATCC 14931]
Length = 308
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 24/116 (20%)
Query: 78 PLRQPTAQQVLINAISA-GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDC 136
PL + TA + L +AI A +T+ GS+TN A+ P +K +I+ I MGG+I
Sbjct: 102 PLAK-TAVEALRDAIMAEDEVTLVPTGSYTNIALLFSQYPEVKSHIKQIVAMGGSI---- 156
Query: 137 FNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
S GN+ AEFN+F+DP AA + ++G+P+ ++ LD T
Sbjct: 157 -------------SGGNM-----TSAAEFNVFTDPDAAKIMYNAGVPIVMVGLDVT 194
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 21/160 (13%)
Query: 541 ELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIG-LQNSSSVIQDVYIVGGNKG 599
+ QPLA +++ ++I ++T++ G TN+A + S I+ + +GG+
Sbjct: 98 DFGQPLAKTAVEALRDAIMAEDEVTLVPTGSYTNIALLFSQYPEVKSHIKQIVAMGGSIS 157
Query: 600 QDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLR 659
N + AEFN+F DP AAK ++ + + I ++ L + K L
Sbjct: 158 GGN---------MTSAAEFNVFTDPDAAKIMYNAGVPIVMVGLDVT------LKALLTPA 202
Query: 660 DRKKTPESVFSQRLLQGLMTL-----QQSHHSYHHVDTFL 694
++K E + ++L L+T Q H H V+T
Sbjct: 203 SQEKLLEMGEAGKMLHDLVTHYNDGDDQDGHPMHDVNTIF 242
>gi|333396496|ref|ZP_08478313.1| ribonucleoside hydrolase 1 [Lactobacillus coryniformis subsp.
coryniformis KCTC 3167]
Length = 311
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 53/116 (45%), Gaps = 25/116 (21%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
S P+T+ V G TN A+FL +P LK + I MGGA+ +G
Sbjct: 115 SDEPVTLVVTGPMTNAALFLSVHPELKDKLAQIVFMGGAM-----------------GLG 157
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT---KTIPVSENFFVEF 205
N P EFN+F DP AA V+ +G+P+ + LD T + +P F E
Sbjct: 158 NW-----TPQVEFNMFVDPEAAKLVIDTGVPLVMAGLDVTHKAQILPADVTAFREI 208
>gi|268319138|ref|YP_003292794.1| putative ribonucleoside hydrolase [Lactobacillus johnsonii FI9785]
gi|262397513|emb|CAX66527.1| putative ribonucleoside hydrolase [Lactobacillus johnsonii FI9785]
Length = 307
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 22/94 (23%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
+T+ +G T+FA+ P + KNI +Y+MGG N+
Sbjct: 120 VTLLGVGPLTDFALLFKQYPDVVKNIAEVYIMGG----------------------NIGH 157
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLD 190
+ +P+AE+NI DP AA V HSG+PV + PL+
Sbjct: 158 GNHSPFAEYNIAGDPEAAQIVFHSGLPVYVAPLE 191
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 17/120 (14%)
Query: 531 FGASQDNDDPELRQP--LAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIG-LQNSSSV 587
F + NDD L +P A +++ I S E K+T+L GPLT+ A + +
Sbjct: 90 FELEKANDD--LLEPGLAATKMYEIIKNSPE---KVTLLGVGPLTDFALLFKQYPDVVKN 144
Query: 588 IQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
I +VYI+GGN G N S +AE+N+ DP AA+ VF S L + + PL + +
Sbjct: 145 IAEVYIMGGNIGHGNH---------SPFAEYNIAGDPEAAQIVFHSGLPVYVAPLEIGDK 195
>gi|420152713|ref|ZP_14659737.1| putative pyrimidine-specific ribonucleoside hydrolase RihB
[Actinomyces massiliensis F0489]
gi|394764006|gb|EJF45977.1| putative pyrimidine-specific ribonucleoside hydrolase RihB
[Actinomyces massiliensis F0489]
Length = 334
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 65/149 (43%), Gaps = 31/149 (20%)
Query: 47 RQAIPVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI---SAGPITVFVMG 103
R+AI Y++ GL LP+ R PL A LI I + G ITV G
Sbjct: 73 REAI---DAAYIHGQTGLDGVDLPEPSR---PLPDQHAVTWLIETIMSHAPGTITVVPTG 126
Query: 104 SHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYA 163
TN A+ P + + ++ I MGGA +GN + P A
Sbjct: 127 PLTNIAVAARLEPRIVERVKEIVFMGGAY-----------------GVGN-----ATPVA 164
Query: 164 EFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
EFNI DP AA+ V++ P+T+I LD T
Sbjct: 165 EFNILCDPEAAHIVVNESWPLTMIGLDVT 193
Score = 42.4 bits (98), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 538 DDPELRQPL----AVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQ-NSSSVIQDVY 592
D PE +PL AV + S PG+ IT++ GPLTN+A L+ ++++
Sbjct: 91 DLPEPSRPLPDQHAVTWLIETIMSHAPGT-ITVVPTGPLTNIAVAARLEPRIVERVKEIV 149
Query: 593 IVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
+GG G N ++ AEFN+ DP AA V + +I L + R
Sbjct: 150 FMGGAYGVGN---------ATPVAEFNILCDPEAAHIVVNESWPLTMIGLDVTHR 195
>gi|300362082|ref|ZP_07058259.1| possible ribosylpyrimidine nucleosidase [Lactobacillus gasseri
JV-V03]
gi|300354701|gb|EFJ70572.1| possible ribosylpyrimidine nucleosidase [Lactobacillus gasseri
JV-V03]
Length = 307
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 24/109 (22%)
Query: 84 AQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTN 141
A + AI + P +T+ +G T+FA+ P + +NI +Y+MGG
Sbjct: 105 AATKMYEAIKSSPEKVTLLGIGPLTDFALLFKQYPDVVENIAKVYIMGG----------- 153
Query: 142 SSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLD 190
N+ + +P+AE+NI DP AA V HSG+PV + PL+
Sbjct: 154 -----------NIGHGNHSPFAEYNIAGDPEAAQIVFHSGLPVYVAPLE 191
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 17/117 (14%)
Query: 531 FGASQDNDDPELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQD 590
F + N+D + A ++++I S E K+T+L GPLT+ A + + V+++
Sbjct: 90 FEFEKANNDLLMSGLAATKMYEAIKSSPE---KVTLLGIGPLTDFALL--FKQYPDVVEN 144
Query: 591 ---VYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHM 644
VYI+GGN G N S +AE+N+ DP AA+ VF S L + + PL +
Sbjct: 145 IAKVYIMGGNIGHGNH---------SPFAEYNIAGDPEAAQIVFHSGLPVYVAPLEI 192
>gi|429460213|gb|AFZ84928.1| nucleoside N-ribohydrolase 2 [Physcomitrella patens subsp. patens]
Length = 341
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 65/151 (43%), Gaps = 27/151 (17%)
Query: 95 GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNL 154
G +TV +G TN A+ + +P+ KNI + V+GGA FN++ GN+
Sbjct: 142 GEVTVVALGPLTNIALAIQKDPNFVKNIGQLVVLGGA-----FNAS-----------GNV 185
Query: 155 YPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEA 214
NP AE NIF DP AA V SG+ +I + T + ++ E Y
Sbjct: 186 -----NPAAEANIFGDPEAADLVFTSGMDTLVIGISLTTQVIFNDQDLSEIRDSGGKY-G 239
Query: 215 QYCFQSLKMIRDTWSGSPPF-----HEAYCM 240
+Y + + D S F H+ CM
Sbjct: 240 KYIYDCCRFYHDFHLESDHFDGIFLHDPTCM 270
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 55/101 (54%), Gaps = 8/101 (7%)
Query: 560 PGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFN 619
PG ++T++ GPLTN+A + +Q + ++++ + G N GNV + AE N
Sbjct: 141 PG-EVTVVALGPLTNIA--LAIQKDPNFVKNIGQLVVLGGAFNASGNV-----NPAAEAN 192
Query: 620 MFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRD 660
+F DP AA VF S ++ +I + + +V + L ++RD
Sbjct: 193 IFGDPEAADLVFTSGMDTLVIGISLTTQVIFNDQDLSEIRD 233
>gi|283768780|ref|ZP_06341691.1| inosine-uridine preferring nucleoside hydrolase [Bulleidia extructa
W1219]
gi|283104566|gb|EFC05939.1| inosine-uridine preferring nucleoside hydrolase [Bulleidia extructa
W1219]
Length = 312
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 61/138 (44%), Gaps = 27/138 (19%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMN 114
+V+ GL A +P+ A + + A L A + G + + +G TN AI L
Sbjct: 82 FVHGKDGLGGAIIPESK---AIVEEKKAWDALYEAALEAKGNLEIVAVGPLTNIAISLYK 138
Query: 115 NPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAA 174
+P L + ++ I +MGGA GN P +EFNI +DP AA
Sbjct: 139 HPDLTQYVKRILIMGGAAMG-----------------GN-----CTPCSEFNIHTDPHAA 176
Query: 175 YTVLHSGIPVTIIPLDAT 192
TV GIP+ + LD T
Sbjct: 177 ETVFKCGIPIVMFGLDVT 194
>gi|444426866|ref|ZP_21222269.1| hypothetical protein B878_13010 [Vibrio campbellii CAIM 519 = NBRC
15631]
gi|444239881|gb|ELU51435.1| hypothetical protein B878_13010 [Vibrio campbellii CAIM 519 = NBRC
15631]
Length = 322
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 75/135 (55%), Gaps = 19/135 (14%)
Query: 536 DNDDPELRQPLAVDV--WKSIVESI--EPGSKITILTNGPLTNLAQIIGLQNSSSVI--- 588
D P L A+D ++ I+ES+ EPG +IT++ GPLTNLA + L+ ++
Sbjct: 89 DVKAPSLLNVSAIDTPAYRYIIESVRAEPG-EITLVAVGPLTNLA--LALEADPEIVNLV 145
Query: 589 QDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
++V ++GG G+++ +GNV + +AE N+ DP AA VF + + +I L +
Sbjct: 146 KEVVVMGGAFGENDHRGNV-----TPFAEANIHDDPHAADKVFTASWPVVIIGLDVTEE- 199
Query: 649 ASFF--KILHKLRDR 661
SFF + L +LR+
Sbjct: 200 -SFFTGQYLDQLREE 213
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 58/121 (47%), Gaps = 25/121 (20%)
Query: 84 AQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTN 141
A + +I ++ A P IT+ +G TN A+ L +P + ++ + VMGGA +
Sbjct: 105 AYRYIIESVRAEPGEITLVAVGPLTNLALALEADPEIVNLVKEVVVMGGAFGEN------ 158
Query: 142 SSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENF 201
D GN+ P+AE NI DP AA V + PV II LD T+ E+F
Sbjct: 159 -------DHRGNV-----TPFAEANIHDDPHAADKVFTASWPVVIIGLDVTE-----ESF 201
Query: 202 F 202
F
Sbjct: 202 F 202
>gi|357012515|ref|ZP_09077514.1| nucleosidase [Paenibacillus elgii B69]
Length = 305
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 22/154 (14%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
+T+ +N A L P + + + +MGGA+ + +GN+
Sbjct: 118 LTIVATAPLSNLAAALTKAPEIAGMVGKVVIMGGAVMT----------------LGNV-- 159
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQY 216
+AE NI DP AA VL SG+P+T++ LD T+ ++ ++ R + T E+ +
Sbjct: 160 ---TKFAEANIIIDPEAASIVLESGMPITLVGLDVTRKTLLTRADAQQW-REKGTPESIF 215
Query: 217 CFQSLKMIRDTWSGSPPFHEAYCMWDSFMAGVAL 250
Q + D +S P+ + + D GVA+
Sbjct: 216 FAQFTEFYLDAYSTLHPYLKGCALHDPLAVGVAV 249
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 11/136 (8%)
Query: 554 IVESI-EPGSKITILTNGPLTNLAQ-IIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVP 611
++E I E +TI+ PL+NLA + + ++ V I+GG GNV
Sbjct: 107 LIEQIYEHKKDLTIVATAPLSNLAAALTKAPEIAGMVGKVVIMGGAV---MTLGNV---- 159
Query: 612 SSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQ 671
+K+AE N+ +DP AA V ES + I L+ L + R+ + R+ K TPES+F
Sbjct: 160 -TKFAEANIIIDPEAASIVLESGMPITLVGLDVTRKTLLTRADAQQWRE-KGTPESIFFA 217
Query: 672 RLLQGLMTLQQSHHSY 687
+ + + + H Y
Sbjct: 218 QFTEFYLDAYSTLHPY 233
>gi|331694599|ref|YP_004330838.1| inosine/uridine-preferring nucleoside hydrolase [Pseudonocardia
dioxanivorans CB1190]
gi|326949288|gb|AEA22985.1| Inosine/uridine-preferring nucleoside hydrolase [Pseudonocardia
dioxanivorans CB1190]
Length = 325
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 29/148 (19%)
Query: 61 NYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAG--PITVFVMGSHTNFAIFLMNNPHL 118
GLR P G P +A +++ + +++ P+T+ +G T+ A+ L ++P L
Sbjct: 90 GLGLRADAFPAPG----PGDARSAVELMADVLTSAEAPVTIVCLGPMTDAALLLGSHPAL 145
Query: 119 KKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVL 178
I I MGG++ S GN + EFNI++DP AA+ VL
Sbjct: 146 IPRIGRIVAMGGSLGS-----------------GN-----TRGAGEFNIYADPEAAHRVL 183
Query: 179 -HSGIPVTIIPLDATKTIPVSENFFVEF 205
+ +PVT++PLD T V + E
Sbjct: 184 TQADVPVTLVPLDLTMRCAVEGTWLDEL 211
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 13/105 (12%)
Query: 547 AVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNS-SSVIQDVYIVGGNKGQDNEKG 605
AV++ ++ S E + +TI+ GP+T+ A ++G + I + +GG+ G N +G
Sbjct: 109 AVELMADVLTSAE--APVTIVCLGPMTDAALLLGSHPALIPRIGRIVAMGGSLGSGNTRG 166
Query: 606 NVFTVPSSKYAEFNMFLDPLAAKAVF-ESKLEIKLIPLHMQRRVA 649
EFN++ DP AA V ++ + + L+PL + R A
Sbjct: 167 ---------AGEFNIYADPEAAHRVLTQADVPVTLVPLDLTMRCA 202
>gi|294786697|ref|ZP_06751951.1| pyrimidine-specific ribonucleoside hydrolase RihA
(Cytidine/uridine-specific hydrolase) [Parascardovia
denticolens F0305]
gi|315226311|ref|ZP_07868099.1| cytidine/uridine-specific hydrolase [Parascardovia denticolens DSM
10105 = JCM 12538]
gi|294485530|gb|EFG33164.1| pyrimidine-specific ribonucleoside hydrolase RihA
(Cytidine/uridine-specific hydrolase) [Parascardovia
denticolens F0305]
gi|315120443|gb|EFT83575.1| cytidine/uridine-specific hydrolase [Parascardovia denticolens DSM
10105 = JCM 12538]
Length = 367
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 141/332 (42%), Gaps = 43/332 (12%)
Query: 404 LMGKPVVF-DIDMSAGDFLALIYLLKLPVELINLKGILVSSTGWATSATVDVVYDLLHMM 462
+ P +F D D LA++YL++ +L+ + G+ + + DLL +
Sbjct: 1 MTSSPRIFLSCDTGIDDALAILYLVESHADLVGVSGVFGNVPEEVATKNS---RDLLDFL 57
Query: 463 GRDDIPVGLGDVFAVGEVNPKFPPIGGCKYAKAIPL----------GSGGFLDSD----- 507
GR++IPV G P F G + P G GF +++
Sbjct: 58 GREEIPV------YRGAARPSF--WGKTEETMDKPYQVDPGCTVFHGINGFGNAELPVRP 109
Query: 508 TLYGLARDLPRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESI-EPGSKITI 566
+ R +P + + S + + +P R + D +I++++ E G+ +T+
Sbjct: 110 SSAKDGRGIPWETSLESQQESPQNASQALRQEPRKRFRILPDAAGAIIKAVKEFGTSLTV 169
Query: 567 LTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKY---AEFNMFLD 623
L GPLT++++ I + S+I D+ +V G V T P + Y E N+ D
Sbjct: 170 LATGPLTDVSEAI--RREPSIIPDLRLV--------LMGGVLTQPGNGYNLVTETNIIND 219
Query: 624 PLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQS 683
P AA+AVF + ++I ++ L + R + +++ TP + F ++L ++ +
Sbjct: 220 PEAAQAVFATDMDITMVGLDVTHRCLVTREQEAQVK-ALGTPLATFVGQMLDYYLSANEK 278
Query: 684 HHSYHHVDTFLGEVLGAVILGGNPHLNQTYKI 715
+ L + L A + P L +T+ I
Sbjct: 279 SDPVFLAGSPLHDPLAAAV-ALEPSLVETFPI 309
>gi|424033552|ref|ZP_17772966.1| inosine-uridine preferring nucleoside hydrolase family protein
[Vibrio cholerae HENC-01]
gi|408874416|gb|EKM13587.1| inosine-uridine preferring nucleoside hydrolase family protein
[Vibrio cholerae HENC-01]
Length = 322
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 70/154 (45%), Gaps = 27/154 (17%)
Query: 51 PVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNF 108
PVG + V+ G P A + +P A Q +I+++ P IT+ +G TN
Sbjct: 74 PVGATVVVHGEEGFGDVKAPSSLNVTA-IDKP-AYQYIIDSVREQPGEITLVAVGPLTNL 131
Query: 109 AIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIF 168
A+ L +P + ++ + VMGGA + D GN+ PYAE NI
Sbjct: 132 ALALEADPEIVHLVKEVVVMGGAFGEN-------------DHRGNV-----TPYAEANIH 173
Query: 169 SDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFF 202
DP AA V + PV II LD T+ E+FF
Sbjct: 174 DDPHAADKVFTASWPVVIIGLDVTE-----ESFF 202
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 69/117 (58%), Gaps = 17/117 (14%)
Query: 551 WKSIVESI--EPGSKITILTNGPLTNLAQIIGLQNSSSVI---QDVYIVGGNKGQDNEKG 605
++ I++S+ +PG +IT++ GPLTNLA + L+ ++ ++V ++GG G+++ +G
Sbjct: 106 YQYIIDSVREQPG-EITLVAVGPLTNLA--LALEADPEIVHLVKEVVVMGGAFGENDHRG 162
Query: 606 NVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFF--KILHKLRD 660
NV + YAE N+ DP AA VF + + +I L + SFF + L +LRD
Sbjct: 163 NV-----TPYAEANIHDDPHAADKVFTASWPVVIIGLDVTEE--SFFTGQYLDQLRD 212
>gi|408482001|ref|ZP_11188220.1| inosine/uridine-preferring nucleoside hydrolase [Pseudomonas sp.
R81]
Length = 358
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 23/135 (17%)
Query: 70 PQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYV 127
P G + LR+ A Q +++++ A P +T+ +G TN A+ + + P + I+ I
Sbjct: 136 PDGLATHTKLRKEAAAQFIVDSVRANPHQVTILAVGPLTNVALAIRSAPDIVPLIKRIVY 195
Query: 128 MGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTII 187
MGGA+ P ++ P AEFN + DP AA VL S I I
Sbjct: 196 MGGALE---------------------IPGNTTPAAEFNWWFDPEAAKIVLRSPIEHVIF 234
Query: 188 PLDATKTIPVSENFF 202
P D + + + +
Sbjct: 235 PNDVCEKVTFDKTVY 249
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 9/135 (6%)
Query: 554 IVESIEPG-SKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPS 612
IV+S+ ++TIL GPLTN+A + ++++ ++ + + G GN T P+
Sbjct: 154 IVDSVRANPHQVTILAVGPLTNVA--LAIRSAPDIVPLIKRIVYMGGALEIPGN--TTPA 209
Query: 613 SKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQR 672
AEFN + DP AAK V S +E + P + +V +F K +++ +K +
Sbjct: 210 ---AEFNWWFDPEAAKIVLRSPIEHVIFPNDVCEKV-TFDKTVYQRVIAQKGAIADLYTH 265
Query: 673 LLQGLMTLQQSHHSY 687
L S+HS+
Sbjct: 266 EFGPLFDKDPSYHSF 280
>gi|388598740|ref|ZP_10157136.1| hypothetical protein VcamD_02448 [Vibrio campbellii DS40M4]
Length = 322
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 75/135 (55%), Gaps = 19/135 (14%)
Query: 536 DNDDPELRQPLAVDV--WKSIVESI--EPGSKITILTNGPLTNLAQIIGLQNSSSVI--- 588
D P L A+D ++ I+ES+ EPG +IT++ GPLTNLA + L+ ++
Sbjct: 89 DVKAPSLLNVSAIDTPAYRYIIESVRAEPG-EITLVAVGPLTNLA--LALEADPEIVNLV 145
Query: 589 QDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
++V ++GG G+++ +GNV + +AE N+ DP AA VF + + +I L +
Sbjct: 146 KEVVVMGGAFGENDHRGNV-----TPFAEANIHDDPHAADKVFTASWPVVIIGLDVTEE- 199
Query: 649 ASFF--KILHKLRDR 661
SFF + L +LR+
Sbjct: 200 -SFFTGQYLDQLREE 213
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 58/121 (47%), Gaps = 25/121 (20%)
Query: 84 AQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTN 141
A + +I ++ A P IT+ +G TN A+ L +P + ++ + VMGGA +
Sbjct: 105 AYRYIIESVRAEPGEITLVAVGPLTNLALALEADPEIVNLVKEVVVMGGAFGEN------ 158
Query: 142 SSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENF 201
D GN+ P+AE NI DP AA V + PV II LD T+ E+F
Sbjct: 159 -------DHRGNV-----TPFAEANIHDDPHAADKVFTASWPVVIIGLDVTE-----ESF 201
Query: 202 F 202
F
Sbjct: 202 F 202
>gi|365851274|ref|ZP_09391712.1| putative cytidine/uridine-specific hydrolase [Lactobacillus
parafarraginis F0439]
gi|363717097|gb|EHM00481.1| putative cytidine/uridine-specific hydrolase [Lactobacillus
parafarraginis F0439]
Length = 305
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 24/112 (21%)
Query: 83 TAQQVLINAISAG--PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNST 140
TA + L + I A IT+ GS+TN A+ P +K +I+ I MGG++
Sbjct: 102 TAVEALRDTILASDEKITLVPTGSYTNIALLFSEYPEVKDHIDRIVAMGGSL-------- 153
Query: 141 NSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
+GN+ AEFN+F+DP AA + SG+P+T++ LD T
Sbjct: 154 ---------GMGNM-----TSAAEFNVFTDPDAAKVMYQSGLPITMVGLDIT 191
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 11/120 (9%)
Query: 541 ELRQPLAVDVWKSIVESI-EPGSKITILTNGPLTNLAQIIG-LQNSSSVIQDVYIVGGNK 598
+L +P+A +++ ++I KIT++ G TN+A + I + +GG+
Sbjct: 94 DLGKPVAKTAVEALRDTILASDEKITLVPTGSYTNIALLFSEYPEVKDHIDRIVAMGGSL 153
Query: 599 GQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKL 658
G N + AEFN+F DP AAK +++S L I ++ L + + + L KL
Sbjct: 154 GMGN---------MTSAAEFNVFTDPDAAKVMYQSGLPITMVGLDITMKALLTPESLQKL 204
>gi|227890350|ref|ZP_04008155.1| possible ribosylpyrimidine nucleosidase [Lactobacillus johnsonii
ATCC 33200]
gi|227849164|gb|EEJ59250.1| possible ribosylpyrimidine nucleosidase [Lactobacillus johnsonii
ATCC 33200]
Length = 307
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 22/94 (23%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
+T+ +G T+FA+ P + KNI +Y+MGG N+
Sbjct: 120 VTLLGVGPLTDFALLFKQYPDVVKNIAEVYIMGG----------------------NIGH 157
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLD 190
+ +P+AE+NI DP AA V HSG+PV + PL+
Sbjct: 158 GNHSPFAEYNIAGDPEAAQIVFHSGLPVYVAPLE 191
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 17/120 (14%)
Query: 531 FGASQDNDDPELRQP--LAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIG-LQNSSSV 587
F + NDD L +P A +++ I S E K+T+L GPLT+ A + +
Sbjct: 90 FEFEKANDD--LLEPGLAATKMYEIIKNSPE---KVTLLGVGPLTDFALLFKQYPDVVKN 144
Query: 588 IQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRR 647
I +VYI+GGN G N S +AE+N+ DP AA+ VF S L + + PL + +
Sbjct: 145 IAEVYIMGGNIGHGNH---------SPFAEYNIAGDPEAAQIVFHSGLPVYVAPLEIGDK 195
>gi|433449037|ref|ZP_20411902.1| ribonucleoside hydrolase RihC [Weissella ceti NC36]
gi|429539426|gb|ELA07463.1| ribonucleoside hydrolase RihC [Weissella ceti NC36]
Length = 304
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 92/194 (47%), Gaps = 31/194 (15%)
Query: 538 DDPELR-QPLAVDVWKSIVESIEPG-SKITILTNGPLTNLAQII-GLQNSSSVIQDVYIV 594
D PE QPL +D ++I + + +TI+ G TN+A ++ ++I+++ ++
Sbjct: 90 DFPEAHSQPLQIDAVEAIHNELHAADAPMTIIATGAYTNIALLLQKYPEDGALIKELILM 149
Query: 595 GGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKI 654
GG+ GNV S AEFN+F DP AAK VFES L I +I L + +
Sbjct: 150 GGSI----SGGNV-----SSVAEFNVFTDPDAAKVVFESGLPIVMIGLDVTLNALITTET 200
Query: 655 LHKLRDRKKTPESVFSQRLLQGLMTLQQSHHS----YHHVDTFLGEVLGAVILGGNPHLN 710
LR + E +L G++T H H V+T L V NP L
Sbjct: 201 TEALRTLGRAGE------MLYGIITAYGDVHEGGKPMHDVNTILYAV--------NPDL- 245
Query: 711 QTYKIKSLEIISDG 724
T + +++++I++G
Sbjct: 246 ITTRPEAIDVITEG 259
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 63/138 (45%), Gaps = 27/138 (19%)
Query: 57 YVNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAG--PITVFVMGSHTNFAIFLMN 114
Y++ G+ P+ + PL Q A + + N + A P+T+ G++TN A+ L
Sbjct: 79 YIHGESGMPGYDFPEAHSQ--PL-QIDAVEAIHNELHAADAPMTIIATGAYTNIALLLQK 135
Query: 115 NPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAA 174
P I+ + +MGG+I +S AEFN+F+DP AA
Sbjct: 136 YPEDGALIKELILMGGSISGGNVSSV----------------------AEFNVFTDPDAA 173
Query: 175 YTVLHSGIPVTIIPLDAT 192
V SG+P+ +I LD T
Sbjct: 174 KVVFESGLPIVMIGLDVT 191
>gi|448733352|ref|ZP_21715597.1| inosine/uridine-preferring nucleoside hydrolase [Halococcus
salifodinae DSM 8989]
gi|445803086|gb|EMA53386.1| inosine/uridine-preferring nucleoside hydrolase [Halococcus
salifodinae DSM 8989]
Length = 307
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 61/150 (40%), Gaps = 26/150 (17%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
+T+ +G TN A L + L ++ IY+MGGA L P
Sbjct: 118 LTIVAIGPQTNLATALAIDEDLPATVDDIYLMGGA---------------------ALCP 156
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATK--TIPVSE-NFFVEFERRQNTYE 213
+ P AEFN + DP A V P ++ LD T+ T+P E + Q T
Sbjct: 157 GNVTPAAEFNFYVDPEAVSRVFRGATP-KVVGLDVTEAATVPARTIEELAEEDEPQRTLA 215
Query: 214 AQYCFQSLKMIRD-TWSGSPPFHEAYCMWD 242
A + ++ IRD +G H+A + D
Sbjct: 216 AWLGYSEVEAIRDGALAGDQAIHDATVIVD 245
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 66/148 (44%), Gaps = 17/148 (11%)
Query: 559 EPGSKITILTNGPLTNLAQIIGL-QNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAE 617
E G +TI+ GP TNLA + + ++ + + D+Y++GG GNV + AE
Sbjct: 113 EYGDDLTIVAIGPQTNLATALAIDEDLPATVDDIYLMGGAALC---PGNV-----TPAAE 164
Query: 618 FNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFS------- 670
FN ++DP A VF K++ L + + + +L + + ++ +
Sbjct: 165 FNFYVDPEAVSRVFRGATP-KVVGLDVTEAATVPARTIEELAEEDEPQRTLAAWLGYSEV 223
Query: 671 QRLLQGLMTLQQSHHSYHHVDTFLGEVL 698
+ + G + Q+ H + L +VL
Sbjct: 224 EAIRDGALAGDQAIHDATVIVDILDDVL 251
>gi|339007757|ref|ZP_08640331.1| pyrimidine-specific ribonucleoside hydrolase RihA [Brevibacillus
laterosporus LMG 15441]
gi|338774960|gb|EGP34489.1| pyrimidine-specific ribonucleoside hydrolase RihA [Brevibacillus
laterosporus LMG 15441]
Length = 323
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 66/161 (40%), Gaps = 24/161 (14%)
Query: 97 ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156
+ + MG TN A + +P L K I+ + + GGAIR GN+
Sbjct: 122 LIIVTMGRLTNLANAVAKDPSLGKRIKQVIIAGGAIRV----------------AGNV-- 163
Query: 157 DDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQY 216
AEFN + DP AA VL + +P+TII LD T+ ++ + ++ + +
Sbjct: 164 ---TAAAEFNFWGDPEAALFVLEADLPITIIGLDITQPTLITARHLDQLLHKKTEHTERV 220
Query: 217 CFQSLKMIR---DTWSGSPPFHEAYCMWDSFMAGVALSIML 254
+M+R + + + M GVAL L
Sbjct: 221 LSLIEEMVRFPFEKCEAAEQCQPSIAMQGPLAVGVALDSTL 261
>gi|379704038|ref|YP_005220412.1| Inosine-uridine nucleoside N-ribohydrolase [Rahnella aquatilis CIP
78.65 = ATCC 33071]
gi|371590675|gb|AEX54404.1| Inosine-uridine nucleoside N-ribohydrolase [Rahnella aquatilis CIP
78.65 = ATCC 33071]
Length = 324
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 21/97 (21%)
Query: 96 PITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLY 155
PI++ V+G TN A+ L +P + + I+ I M A + +G+
Sbjct: 120 PISLCVIGPMTNIALALGMHPDVARGIKQIVTMSCAFTA----------------LGHRV 163
Query: 156 PDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
P +AEFN+++DP AA V +SG+P+ I+PLD T
Sbjct: 164 P-----WAEFNVYADPHAAEKVFNSGVPLIIMPLDMT 195
>gi|156975322|ref|YP_001446229.1| hypothetical protein VIBHAR_03052 [Vibrio harveyi ATCC BAA-1116]
gi|156526916|gb|ABU72002.1| hypothetical protein VIBHAR_03052 [Vibrio harveyi ATCC BAA-1116]
Length = 322
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 75/135 (55%), Gaps = 19/135 (14%)
Query: 536 DNDDPELRQPLAVDV--WKSIVESI--EPGSKITILTNGPLTNLAQIIGLQNSSSVI--- 588
D P L A+D ++ I+ES+ EPG +IT++ GPLTNLA + L+ ++
Sbjct: 89 DVKAPSLLNVSAIDTPAYRYIIESVRAEPG-EITLVAVGPLTNLA--LALEADPEIVNLV 145
Query: 589 QDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
++V ++GG G+++ +GNV + +AE N+ DP AA VF + + +I L +
Sbjct: 146 KEVVVMGGAFGENDHRGNV-----TPFAEANIHDDPHAADKVFTASWPVVIIGLDVTEE- 199
Query: 649 ASFF--KILHKLRDR 661
SFF + L +LR+
Sbjct: 200 -SFFTGQYLDQLREE 213
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 58/121 (47%), Gaps = 25/121 (20%)
Query: 84 AQQVLINAISAGP--ITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTN 141
A + +I ++ A P IT+ +G TN A+ L +P + ++ + VMGGA +
Sbjct: 105 AYRYIIESVRAEPGEITLVAVGPLTNLALALEADPEIVNLVKEVVVMGGAFGEN------ 158
Query: 142 SSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENF 201
D GN+ P+AE NI DP AA V + PV II LD T+ E+F
Sbjct: 159 -------DHRGNV-----TPFAEANIHDDPHAADKVFTASWPVVIIGLDVTE-----ESF 201
Query: 202 F 202
F
Sbjct: 202 F 202
>gi|86607985|ref|YP_476747.1| inosine-uridine preferring nucleoside hydrolase family protein
[Synechococcus sp. JA-2-3B'a(2-13)]
gi|86556527|gb|ABD01484.1| Inosine-uridine preferring nucleoside hydrolase family protein
[Synechococcus sp. JA-2-3B'a(2-13)]
Length = 311
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 28/141 (19%)
Query: 58 VNTNYGLRKAFLPQGGRKYAPLRQPTAQQVLINAISAGP--ITVFVMGSHTNFAIFLMNN 115
V+ G+ A LP+ PL A + LI + A P +T+ ++G TN A+ L+
Sbjct: 81 VHGKTGIDGADLPE---PQMPLGSQHAVEYLIETLMAAPEPVTLALLGPMTNLAVALVQQ 137
Query: 116 PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAY 175
P + + I+ + MGG+ + + P AEFNI +DP AA
Sbjct: 138 PRIVERIQRLVFMGGSA----------------------FEGNVTPAAEFNILTDPHAAQ 175
Query: 176 TVLHSGIP-VTIIPLDATKTI 195
VL +GIP V ++ L T+ +
Sbjct: 176 IVLSAGIPEVVMLGLHVTQQV 196
>gi|372325481|ref|ZP_09520070.1| Inosine-uridine preferring nucleoside hydrolase [Oenococcus
kitaharae DSM 17330]
gi|366984289|gb|EHN59688.1| Inosine-uridine preferring nucleoside hydrolase [Oenococcus
kitaharae DSM 17330]
Length = 305
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 28/114 (24%)
Query: 93 SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIG 152
S+ P+T+ G++TN A+ L+ +P +K I+ +MGG + S G
Sbjct: 115 SSQPMTIVGTGAYTNLALLLVEHPDIKPKIKEFILMGGTL-----------------SQG 157
Query: 153 NLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFE 206
N+ + AEFNI+ DP AA + SGIP+ T I VS+ ++F+
Sbjct: 158 NM-----SSVAEFNIYCDPEAADLIYRSGIPIV------TAGIDVSQKALIKFQ 200
>gi|365925713|ref|ZP_09448476.1| ABC transporter binding protein [Lactobacillus mali KCTC 3596 = DSM
20444]
gi|420266680|ref|ZP_14769129.1| ABC transporter binding protein [Lactobacillus mali KCTC 3596 = DSM
20444]
gi|394424898|gb|EJE97951.1| ABC transporter binding protein [Lactobacillus mali KCTC 3596 = DSM
20444]
Length = 313
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 5/109 (4%)
Query: 540 PELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIGLQNSSSVIQDVYIVGGNKG 599
PE +P +D+ + S KIT++ GPLT+LA+ + L SS+ + + + G
Sbjct: 101 PEADEPAHLDLLHKLQNS---SDKITLVFTGPLTDLARALELD--SSITKKIKRLVWMGG 155
Query: 600 QDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRV 648
EKGNV S E+N F DP A K VF+S + I L+ L V
Sbjct: 156 TFLEKGNVEEPDSDNTQEWNAFWDPEAVKTVFDSDIPIDLVSLESTNNV 204
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 97/241 (40%), Gaps = 34/241 (14%)
Query: 13 GEGGILPNGTILPDVGGYQPIIDQ---GMSTA-GECRYRQAIPVGQRLYVNTNYGLRKAF 68
G G + + + P V + IID+ G + A R P + ++T
Sbjct: 32 GVGAVDADSYVGPSVQASRKIIDRFGHGANLAVATSNSRGVHPFPKEWRISTYSENALPI 91
Query: 69 LPQGGRKYAPLRQPTAQQVLINAI--SAGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIY 126
L + G+ P A L++ + S+ IT+ G T+ A L + + K I+ +
Sbjct: 92 LNESGKIITPEADEPAHLDLLHKLQNSSDKITLVFTGPLTDLARALELDSSITKKIKRLV 151
Query: 127 VMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTI 186
MGG GN+ DS+ E+N F DP A TV S IP+ +
Sbjct: 152 WMGGTFLEK----------------GNVEEPDSDNTQEWNAFWDPEAVKTVFDSDIPIDL 195
Query: 187 IPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPF-----HEAYCMW 241
+ L++T +P+++ + + AQ + L I ++++ P + Y +W
Sbjct: 196 VSLESTNNVPLTQTVRLH-------WAAQRRYPGLDFIGNSYAFVPELGLFETYSTYYLW 248
Query: 242 D 242
D
Sbjct: 249 D 249
>gi|260662611|ref|ZP_05863506.1| inosine/uridine-preferring nucleoside hydrolase [Lactobacillus
fermentum 28-3-CHN]
gi|385811834|ref|YP_005848225.1| ribosylpyrimidine nucleosidase [Lactobacillus fermentum CECT 5716]
gi|260553302|gb|EEX26245.1| inosine/uridine-preferring nucleoside hydrolase [Lactobacillus
fermentum 28-3-CHN]
gi|299782733|gb|ADJ40731.1| Possible ribosylpyrimidine nucleosidase [Lactobacillus fermentum
CECT 5716]
Length = 306
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 24/116 (20%)
Query: 78 PLRQPTAQQVLINAISA-GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDC 136
PL + TA + L +AI A +T+ GS+TN A+ P +K +I+ I MGG+I
Sbjct: 100 PLAK-TAVEALRDAIMAEDEVTLVPTGSYTNIALLFSQYPEVKSHIKQIVAMGGSI---- 154
Query: 137 FNSTNSSQSEQCDSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDAT 192
S GN+ AEFN+F+DP AA + ++G+P+ ++ LD T
Sbjct: 155 -------------SGGNM-----TSAAEFNVFTDPDAAKIMYNAGVPIVMVGLDVT 192
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 21/160 (13%)
Query: 541 ELRQPLAVDVWKSIVESIEPGSKITILTNGPLTNLAQIIG-LQNSSSVIQDVYIVGGNKG 599
+ QPLA +++ ++I ++T++ G TN+A + S I+ + +GG+
Sbjct: 96 DFGQPLAKTAVEALRDAIMAEDEVTLVPTGSYTNIALLFSQYPEVKSHIKQIVAMGGSIS 155
Query: 600 QDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHMQRRVASFFKILHKLR 659
N + AEFN+F DP AAK ++ + + I ++ L + K L
Sbjct: 156 GGN---------MTSAAEFNVFTDPDAAKIMYNAGVPIVMVGLDVT------LKALLTPA 200
Query: 660 DRKKTPESVFSQRLLQGLMTL-----QQSHHSYHHVDTFL 694
++K E + ++L L+T Q H H V+T
Sbjct: 201 SQEKLLEMGEAGKMLHDLVTHYNDGDDQDGHPMHDVNTIF 240
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.137 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,168,975,643
Number of Sequences: 23463169
Number of extensions: 585172282
Number of successful extensions: 1227284
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 2538
Number of HSP's that attempted gapping in prelim test: 1216635
Number of HSP's gapped (non-prelim): 8393
length of query: 795
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 644
effective length of database: 8,816,256,848
effective search space: 5677669410112
effective search space used: 5677669410112
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 81 (35.8 bits)