Query 003794
Match_columns 795
No_of_seqs 374 out of 2681
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 04:15:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003794.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003794hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yoe_A Hypothetical protein YB 100.0 1.4E-60 4.8E-65 519.2 26.9 307 402-764 9-321 (322)
2 1q8f_A Pyrimidine nucleoside h 100.0 1.9E-60 6.7E-65 516.3 26.4 303 405-765 2-310 (313)
3 3t8j_A Purine nucleosidase, (I 100.0 4.8E-60 1.6E-64 512.0 27.0 300 407-763 2-310 (311)
4 2mas_A Inosine-uridine nucleos 100.0 7.9E-60 2.7E-64 511.9 25.8 303 407-764 2-310 (314)
5 3fz0_A Nucleoside hydrolase, p 100.0 7.4E-59 2.5E-63 509.9 25.5 310 404-764 4-359 (360)
6 3t8i_A Purine nucleosidase, (I 100.0 1.6E-58 5.3E-63 498.3 24.5 297 407-762 2-305 (306)
7 2c40_A Inosine-uridine preferr 100.0 2.9E-57 1E-61 491.6 20.6 302 407-764 2-310 (312)
8 3epw_A IAG-nucleoside hydrolas 100.0 3.1E-57 1E-61 495.6 14.2 319 402-763 9-337 (338)
9 1yoe_A Hypothetical protein YB 100.0 2.8E-46 9.5E-51 406.7 19.3 218 1-286 66-286 (322)
10 3t8j_A Purine nucleosidase, (I 100.0 6.7E-46 2.3E-50 401.4 17.6 217 1-286 53-273 (311)
11 1q8f_A Pyrimidine nucleoside h 100.0 6.4E-46 2.2E-50 402.5 16.6 215 3-286 57-274 (313)
12 3t8i_A Purine nucleosidase, (I 100.0 2.9E-46 9.8E-51 402.8 12.8 217 1-286 52-272 (306)
13 2mas_A Inosine-uridine nucleos 100.0 1.2E-45 4.2E-50 400.5 15.0 218 1-286 54-275 (314)
14 3fz0_A Nucleoside hydrolase, p 100.0 8.7E-44 3E-48 390.5 13.9 218 2-286 60-318 (360)
15 2c40_A Inosine-uridine preferr 100.0 1.3E-42 4.6E-47 376.6 12.7 225 1-286 54-280 (312)
16 3epw_A IAG-nucleoside hydrolas 100.0 1.6E-41 5.6E-46 371.2 1.2 178 80-286 124-306 (338)
17 2yhg_A SDE_182CT, cellulose-bi 98.4 2E-06 6.9E-11 95.8 13.2 141 405-598 27-189 (437)
18 2yhg_A SDE_182CT, cellulose-bi 93.4 0.052 1.8E-06 60.6 4.5 50 81-131 127-188 (437)
No 1
>1yoe_A Hypothetical protein YBEK; pyrimidine nucleoside hydrolase, bacterial nucleosidase, RIB enzyme-product complex, hydrolase; HET: RIB; 1.78A {Escherichia coli} PDB: 3g5i_A*
Probab=100.00 E-value=1.4e-60 Score=519.20 Aligned_cols=307 Identities=22% Similarity=0.297 Sum_probs=257.8
Q ss_pred CCCCCCcEEEEcCCCchHHHHHHHHHhCCCCceeEEEEE-EeCCCCchhHhHHHHHHHHHHhCCCCCcEeecccccccCC
Q 003794 402 KKLMGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGIL-VSSTGWATSATVDVVYDLLHMMGRDDIPVGLGDVFAVGEV 480 (795)
Q Consensus 402 ~~~~~kkVIiDtD~g~DDalAL~~lL~~p~~~idl~gIt-v~Gn~~~~~a~~~~a~~iL~~~Gr~dIPV~~Ga~~pl~~~ 480 (795)
+....+|||||||+|+||++||+|||.+| ++||+||| |+||++.++ +.+|++++|+++||.||||+.|+..||..+
T Consensus 9 ~~~~~~~viiD~D~GiDDa~AL~~al~~p--~i~l~gIttv~GN~~~~~-~~~Na~~ll~~~g~~dIPV~~Ga~~Pl~~~ 85 (322)
T 1yoe_A 9 HHGSALPILLDCDPGHDDAIAIVLALASP--ELDVKAITSSAGNQTPEK-TLRNVLRMLTLLNRTDIPVAGGAVKPLMRE 85 (322)
T ss_dssp --CCCEEEEEEECCSHHHHHHHHHHHTCT--TEEEEEEEECSSSSCHHH-HHHHHHHHHHHTTCTTSCEEECCSSCSSSC
T ss_pred ccCCCceEEEECCCCHHHHHHHHHHHhCC--CCEEEEEEEcCCCCCHHH-HHHHHHHHHHHcCCCCCCEEeCCCccccCC
Confidence 34567899999999999999999999999 89999999 679998876 467999999999999999999999999764
Q ss_pred CCCCCCCCCCCcccccccCCCCCCCccccccccCCCCCCccccccccccccCCCCCCCCCccCchhHHHHHHHHHHhcCC
Q 003794 481 NPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEP 560 (795)
Q Consensus 481 ~~~~p~~~~~~~~~~~~hG~dGlgd~~~~~g~~~~lP~~~~~~~~~~~~~~~~p~~~d~~~~~~~~A~~~~~~i~~~~~~ 560 (795)
. .. ...+||.+||++. .+|++... +...+|+++|.+++++ +
T Consensus 86 ~---------~~-a~~~HG~~Glg~~--------~~p~~~~~-------------------~~~~~Av~~i~~~l~~-~- 126 (322)
T 1yoe_A 86 L---------II-ADNVHGESGLDGP--------ALPEPTFA-------------------PQNCTAVELMAKTLRE-S- 126 (322)
T ss_dssp C---------CC-C-----CCSSCSS--------CCCCCSSC-------------------CCSSCHHHHHHHHHHH-C-
T ss_pred C---------cc-ccccCCCCCCCCc--------CCCCCcCC-------------------CCcchHHHHHHHHHHh-C-
Confidence 2 12 2457999999886 46654221 2346899999998886 3
Q ss_pred CCcEEEEEecchhHHHHHH-hCCCcccccCeEEEecCCCCCCCCCCCccccCCCCcccCCCCCCHHHHHHHHhcCCceEE
Q 003794 561 GSKITILTNGPLTNLAQII-GLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKL 639 (795)
Q Consensus 561 ~~~VtIla~GPLTNLA~al-~~P~i~~~I~~vviMGG~~~~~~~~GNv~~~~~~~~aEfN~~~DP~AA~iV~~s~~~itl 639 (795)
+++||||++|||||||.|+ ++|++.++|++||||||++. .||++ +.||||+|+||+||++||+|++|++|
T Consensus 127 p~~vtiva~GPLTNlA~al~~~P~i~~~i~~iviMGGa~~----~GN~t-----p~AEfN~~~DPeAA~~V~~s~~~i~~ 197 (322)
T 1yoe_A 127 AEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMG----LGNWT-----PAAEFNIYVDPEAAEIVFQSGIPVVM 197 (322)
T ss_dssp SSCEEEEECSCSHHHHHHHHHCGGGGGGEEEEEEECCCSS----CCSSS-----SSCCHHHHHCHHHHHHHHTSSSCEEE
T ss_pred CCCEEEEEeccHHHHHHHHHHChHHHhhCCEEEEeCCCCC----CCCCC-----cccHhhcccCHHHHHHHHhCCCCEEE
Confidence 4799999999999999999 99999999999999999993 59987 58999999999999999999999999
Q ss_pred eccccchhccccHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHhcccccccCccccceeeeeeeccCCccceeeEEEEEE
Q 003794 640 IPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKSLE 719 (795)
Q Consensus 640 ipldvt~~~~~~~~~l~~l~~~~~tp~a~fl~~ll~~~~~~~~~~~~~~~~~~~l~D~Laaa~l~~p~~l~~~~~~~~v~ 719 (795)
+|||+|+++.++++++++|+..+ ++.++|+.+++++|.++.... .+...++++||++|++|+++| +++ +++..+++
T Consensus 198 v~ldvt~~~~~t~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~lhD~lava~~~~P-~~~-~~~~~~v~ 273 (322)
T 1yoe_A 198 AGLDVTHKAQIHVEDTERFRAIG-NPVSTIVAELLDFFLEYHKDE-KWGFVGAPLHDPCTIAWLLKP-ELF-TSVERWVG 273 (322)
T ss_dssp ECHHHHTTSEECHHHHHHHHHHC-SHHHHHHHHHHHHHHC------CCCCSSEECCTHHHHHHHHCG-GGE-EEEEECEE
T ss_pred ECccccccccCCHHHHHHHHhhC-CcHHHHHHHHHHHHHHHHhhc-ccCCCCCccccHHHhhheecc-cce-EEEEEEEE
Confidence 99999999999999999998766 799999999999887643221 233346889999999999999 576 57888999
Q ss_pred EeecCCcccceeEEEecCC----CcceEEEeecCHHHHHHHHHHHHhcc
Q 003794 720 IISDGDISKVGQIIVNQEQ----GKLVKVLESLNVAVYYDHFAEVLGDH 764 (795)
Q Consensus 720 Ve~~g~~~t~G~tv~d~~~----~~~v~v~~~vD~~~f~~~l~~~L~~~ 764 (795)
|+++|. +++|+|++|+.. .+|++|++++|.++|+++|.++|...
T Consensus 274 Ve~~g~-~t~G~tv~d~~~~~~~~~n~~v~~~vD~~~f~~~~~~~l~~~ 321 (322)
T 1yoe_A 274 VETQGK-YTQGMTVVDYYYLTGNKPNATVMVDVDRQGFVDLLADRLKFY 321 (322)
T ss_dssp ECCSCS-SCTTCEEECTTCCSSCCCCEEEEEEECHHHHHHHHHHHHGGG
T ss_pred EEeCCC-CCCceEEEeccccCCCCCCeEEEeecCHHHHHHHHHHHHHhh
Confidence 999875 799999999642 46899999999999999999998753
No 2
>1q8f_A Pyrimidine nucleoside hydrolase; open alpha-beta structure, NH-fold; 1.70A {Escherichia coli} SCOP: c.70.1.1 PDB: 3b9x_A* 3mkn_A* 3mkm_A*
Probab=100.00 E-value=1.9e-60 Score=516.32 Aligned_cols=303 Identities=18% Similarity=0.217 Sum_probs=262.4
Q ss_pred CCCcEEEEcCCCchHHHHHHHHHhCCCCceeEEEEE-EeCCCCchhHhHHHHHHHHHHhCCCCCcEeecccccccCCCCC
Q 003794 405 MGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGIL-VSSTGWATSATVDVVYDLLHMMGRDDIPVGLGDVFAVGEVNPK 483 (795)
Q Consensus 405 ~~kkVIiDtD~g~DDalAL~~lL~~p~~~idl~gIt-v~Gn~~~~~a~~~~a~~iL~~~Gr~dIPV~~Ga~~pl~~~~~~ 483 (795)
+++|||||||+|+||++||+|||.+| ++||+||| |+||++.+++ .+|++++|++ ||.||||+.|+..||..+.
T Consensus 2 ~~~~vIiDtD~GiDDa~Al~~al~~p--~i~l~gIt~v~GN~~~~~~-~~na~~ll~~-g~~dIPV~~Ga~~pl~~~~-- 75 (313)
T 1q8f_A 2 EKRKIILDCDPGHDDAIAIMMAAKHP--AIDLLGITIVAGNQTLDKT-LINGLNVCQK-LEINVPVYAGMPQPIMRQQ-- 75 (313)
T ss_dssp -CEEEEEEECCCHHHHHHHHHHHHCT--TEEEEEEEECSSSSCHHHH-HHHHHHHHHH-TTCCCCEEECCSSCSSSCC--
T ss_pred CCceEEEECCCChHHHHHHHHHHhCC--CCEEEEEEEccCCCCHHHH-HHHHHHHHHc-CCCCCCEEeCCCccccCCC--
Confidence 45799999999999999999999999 89999999 7899998874 5799999999 9999999999999996542
Q ss_pred CCCCCCCCcccccccCCCCCCCccccccccCCCCCCccccccccccccCCCCCCCCCccCchhHHHHHHHHHHhcCCCCc
Q 003794 484 FPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSK 563 (795)
Q Consensus 484 ~p~~~~~~~~~~~~hG~dGlgd~~~~~g~~~~lP~~~~~~~~~~~~~~~~p~~~d~~~~~~~~A~~~~~~i~~~~~~~~~ 563 (795)
..+ ..+||.+||++. .+|++.+. +...+|+++|.+++++ ++++
T Consensus 76 -------~~a-~~~hG~~Glg~~--------~~p~~~~~-------------------~~~~~A~~~i~~~~~~--~~~~ 118 (313)
T 1q8f_A 76 -------IVA-DNIHGDTGLDGP--------VFEPLTRQ-------------------AESTHAVKYIIDTLMA--SDGD 118 (313)
T ss_dssp -------CCC-HHHHCTTSSCSC--------CCCCCCCC-------------------CCSSCHHHHHHHHHHH--SCSC
T ss_pred -------CCc-cccCCCcCCCCC--------CCCCCccC-------------------CCCCcHHHHHHHHHHh--CCCC
Confidence 122 346999999886 36654221 2346899999999886 3479
Q ss_pred EEEEEecchhHHHHHH-hCCCcccccCeEEEecCCCCCCCCCCCccccCCCCcccCCCCCCHHHHHHHHhcCCceEEecc
Q 003794 564 ITILTNGPLTNLAQII-GLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642 (795)
Q Consensus 564 VtIla~GPLTNLA~al-~~P~i~~~I~~vviMGG~~~~~~~~GNv~~~~~~~~aEfN~~~DP~AA~iV~~s~~~itlipl 642 (795)
||||++|||||||.|+ ++|++.++|++||||||++. . ||++ +.||||+|+||+||++||+|++|++|+||
T Consensus 119 vtiva~GPLTNlA~al~~~P~i~~~i~~iviMGG~~~---~-GN~t-----p~aEfN~~~DPeAA~~V~~s~~~i~~v~l 189 (313)
T 1q8f_A 119 ITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAYG---T-GNFT-----PSAEFNIFADPEAARVVFTSGVPLVMMGL 189 (313)
T ss_dssp EEEEECSCSHHHHHHHHHCGGGGGGEEEEEEECCCSS---C-CSSS-----SSCCHHHHTCHHHHHHHHTSCSCEEEECH
T ss_pred EEEEEeccHHHHHHHHHHCHHHHHhCCEEEEECCCCC---C-CCCC-----chhHHhhccCHHHHHHHHhCCCCEEEeCh
Confidence 9999999999999999 99999999999999999993 3 9987 58999999999999999999999999999
Q ss_pred ccchhccccHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHhcccccccCccccceeeeeeeccCCccceeeEEEEEEEee
Q 003794 643 HMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKSLEIIS 722 (795)
Q Consensus 643 dvt~~~~~~~~~l~~l~~~~~tp~a~fl~~ll~~~~~~~~~~~~~~~~~~~l~D~Laaa~l~~p~~l~~~~~~~~v~Ve~ 722 (795)
|+|+++.++++++++|...+ +|.++|+.+++++|.+++... +...++++||++|++|+++| +++ +++..+++|++
T Consensus 190 dvt~~~~~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~g~~g~~lhD~lava~~~~p-~~~-~~~~~~v~Ve~ 264 (313)
T 1q8f_A 190 DLTNQTVCTPDVIARMERAG-GPAGELFSDIMNFTLKTQFEN--YGLAGGPVHDATCIGYLINP-DGI-KTQEMYVEVDV 264 (313)
T ss_dssp HHHGGGEECHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHH--HCCSSEECTTHHHHHHHHCG-GGE-EEEEECEEECC
T ss_pred hhhhcccCCHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHHhc--cCcCCCccchHHHHHHHcCc-cee-EEEEEEEEEEe
Confidence 99999999999999998765 799999999999988766532 22246889999999999999 576 67889999999
Q ss_pred cCCcccceeEEEecCC----CcceEEEeecCHHHHHHHHHHHHhccc
Q 003794 723 DGDISKVGQIIVNQEQ----GKLVKVLESLNVAVYYDHFAEVLGDHK 765 (795)
Q Consensus 723 ~g~~~t~G~tv~d~~~----~~~v~v~~~vD~~~f~~~l~~~L~~~~ 765 (795)
+|. +++|+|++|+.. .+|++|++++|.++|+++|.++|.+..
T Consensus 265 ~g~-~t~G~tv~d~~~~~~~~~n~~v~~~vD~~~f~~~~~~~l~~~~ 310 (313)
T 1q8f_A 265 NSG-PCYGRTVCDELGVLGKPANTKVGITIDTDWFWGLVEECVRGYI 310 (313)
T ss_dssp CSS-TTTTCEEECTTCTTCCCCCEEEEEEECHHHHHHHHHHHHHTTC
T ss_pred CCC-CCCCeEEEeccccCCCCCCEEEEEecCHHHHHHHHHHHHHHhh
Confidence 875 799999999643 478999999999999999999998654
No 3
>3t8j_A Purine nucleosidase, (IUNH-1); nucleoside hydrolase, thermostable protein, open (alpha,beta structure, rossmann fold, NH-fold; 1.60A {Sulfolobus solfataricus}
Probab=100.00 E-value=4.8e-60 Score=512.02 Aligned_cols=300 Identities=19% Similarity=0.198 Sum_probs=259.9
Q ss_pred CcEEEEcCCCchHHHHHHHHHhCCCCceeEEEEE-EeCCCCchhHhHHHHHHHHHHhCCCCCcEeecccccccCCCCCCC
Q 003794 407 KPVVFDIDMSAGDFLALIYLLKLPVELINLKGIL-VSSTGWATSATVDVVYDLLHMMGRDDIPVGLGDVFAVGEVNPKFP 485 (795)
Q Consensus 407 kkVIiDtD~g~DDalAL~~lL~~p~~~idl~gIt-v~Gn~~~~~a~~~~a~~iL~~~Gr~dIPV~~Ga~~pl~~~~~~~p 485 (795)
||||||||+|+||++||+|| .+| ++||+||| |+||++.+++ .+|++++|+++|| ||||+.|+..||..+.
T Consensus 2 ~kvIiDtD~G~DDa~Al~~a-~~p--~iel~gIttv~GN~~~~~~-~~Na~~ll~~~g~-diPV~~Ga~~Pl~~~~---- 72 (311)
T 3t8j_A 2 RHFIIDCDTAEDDVLSLYLL-LKN--NIDVVAVTIVEGNISYEQE-VKNALWALEQVNR-EIPVYPGANKPLLKNY---- 72 (311)
T ss_dssp CEEEEEECCSHHHHHHHHHH-HHT--TCEEEEEEECSSSSCHHHH-HHHHHHHHHHTTC-CCCEEECCSSCSSSCC----
T ss_pred ceEEEECCCChHHHHHHHHH-cCC--CCEEEEEEEccCCCCHHHH-HHHHHHHHHHcCC-CCCEEECCCCCCCCCC----
Confidence 79999999999999999999 678 89999999 7899998874 6799999999999 9999999999997642
Q ss_pred CCCCCCcccccccCCCCCCCccccccccCCCCCCccccccccccccCCCCCCCCCccCchhHHHHHHHHHHhcCCCCcEE
Q 003794 486 PIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKIT 565 (795)
Q Consensus 486 ~~~~~~~~~~~~hG~dGlgd~~~~~g~~~~lP~~~~~~~~~~~~~~~~p~~~d~~~~~~~~A~~~~~~i~~~~~~~~~Vt 565 (795)
.. ....||.+|||+. .+|++... +...+|+++|.+++++ .+++||
T Consensus 73 -----~~-a~~~hG~~Glg~~--------~~p~~~~~-------------------~~~~~A~~~i~~~~~~--~~~~vt 117 (311)
T 3t8j_A 73 -----IT-VEKVHGKGGIGDV--------TVEPKRLK-------------------AQEKHAALAIIDLANE--YAGELE 117 (311)
T ss_dssp -----CC-CHHHHCTTSSSSC--------CCCCSSCC-------------------CCSSCHHHHHHHHHHH--TTTTEE
T ss_pred -----cc-chhhcCCCCCCCC--------CCCCCCCC-------------------CCCchHHHHHHHHHHh--CCCCeE
Confidence 12 2457999999986 36654221 2346799999999886 457999
Q ss_pred EEEecchhHHHHHH-hCCCcccccCeEEEecCCCCCCCCCCCccccCCCCcccCCCCCCHHHHHHHHhcCCceEEecccc
Q 003794 566 ILTNGPLTNLAQII-GLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHM 644 (795)
Q Consensus 566 Ila~GPLTNLA~al-~~P~i~~~I~~vviMGG~~~~~~~~GNv~~~~~~~~aEfN~~~DP~AA~iV~~s~~~itlipldv 644 (795)
||++|||||||.|+ ++|++.++|++||||||++ ..+||++ +.||||+|+||+||++||+|++|++|+|||+
T Consensus 118 iva~GpLTNlA~al~~~P~i~~~i~~iviMGG~~---~~~GN~t-----p~aEfN~~~DPeAA~~V~~sg~~i~~v~ldv 189 (311)
T 3t8j_A 118 FLAISPLTNLALAYLLDNSIVKKIKKVWVMGGAV---FGIGNIT-----PVAEFNIWVDPDAAKIVFNAGFDITMIPWDV 189 (311)
T ss_dssp EEECSCSHHHHHHHHHCTTHHHHEEEEEEECCCT---TSCCSSS-----SSCCHHHHHCHHHHHHHHHTTCCEEEECHHH
T ss_pred EEEecChHHHHHHHHHChHHHhhcCEEEEcCCcc---cCCCCCC-----chhhhccccCHHHHHHHHhCCCCEEEecccc
Confidence 99999999999999 9999999999999999998 5679997 5899999999999999999999999999999
Q ss_pred chhccccHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHhcccccccCccccceeeeeeeccCCccceeeEEEEEEEeecC
Q 003794 645 QRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKSLEIISDG 724 (795)
Q Consensus 645 t~~~~~~~~~l~~l~~~~~tp~a~fl~~ll~~~~~~~~~~~~~~~~~~~l~D~Laaa~l~~p~~l~~~~~~~~v~Ve~~g 724 (795)
|++..++++++++|++.+ +|.++|+.+++++|.+++... +...++.+||++|++|+++| +++.+++..+++|+++|
T Consensus 190 t~~~~lt~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~--~g~~g~~lhD~lava~~l~P-~l~~~~~~~~v~Ve~~g 265 (311)
T 3t8j_A 190 IINYPVTDEEWNVIKNMK-TRMSELYVSMYLHYRQYSSTV--QKINGHPHPDAITTAIAIDG-SIATRREKRFVVIDNTD 265 (311)
T ss_dssp HTTSCBCHHHHHHHHTSC-SHHHHHHHHHHHHHHHHHHHT--SCCSSBCCHHHHHHHHHHCG-GGEEEEEEEEEEECCSS
T ss_pred cccccCCHHHHHHHHhhC-CHHHHHHHHHHHHHHHHHHhh--cCCCCCcCcCHHHHHHHhCH-HHhhccceeeEEEecCC
Confidence 988888999999998865 899999999999998875542 22346889999999999999 57755688999999987
Q ss_pred CcccceeEEEecCC-------CcceEEEeecCHHHHHHHHHHHHhc
Q 003794 725 DISKVGQIIVNQEQ-------GKLVKVLESLNVAVYYDHFAEVLGD 763 (795)
Q Consensus 725 ~~~t~G~tv~d~~~-------~~~v~v~~~vD~~~f~~~l~~~L~~ 763 (795)
. +++|+|++|+.. .+|++|++++|.++|+++|.++|.+
T Consensus 266 ~-~t~G~tv~d~~~~~~~~~~~~n~~v~~~vD~~~f~~~~~~~l~~ 310 (311)
T 3t8j_A 266 N-ITRGMTLVDRFDADTSWSDKPNAEIVYEINKKSFMEKIYDLLNW 310 (311)
T ss_dssp S-TTTTCEEEECSCSSSCSCSSCCEEEEEEECHHHHHHHHHHHHTC
T ss_pred C-CCCceEEEecCCCcccCCCCCCEEEeeccCHHHHHHHHHHHHhh
Confidence 5 799999999642 3599999999999999999999864
No 4
>2mas_A Inosine-uridine nucleoside N-ribohydrolase; purine nucleoside hydrolase, IU-NH, purine nucleosidase; HET: PIR; 2.30A {Crithidia fasciculata} SCOP: c.70.1.1 PDB: 1mas_A* 1ezr_A
Probab=100.00 E-value=7.9e-60 Score=511.92 Aligned_cols=303 Identities=19% Similarity=0.242 Sum_probs=262.2
Q ss_pred CcEEEEcCCCchHHHHHHHHHhCCCCceeEEEEE-EeCCCCchhHhHHHHHHHHHHhCCCCCcEeecccccccCCCCCCC
Q 003794 407 KPVVFDIDMSAGDFLALIYLLKLPVELINLKGIL-VSSTGWATSATVDVVYDLLHMMGRDDIPVGLGDVFAVGEVNPKFP 485 (795)
Q Consensus 407 kkVIiDtD~g~DDalAL~~lL~~p~~~idl~gIt-v~Gn~~~~~a~~~~a~~iL~~~Gr~dIPV~~Ga~~pl~~~~~~~p 485 (795)
+|||||||+|+||++||+|||.+| ++||+||| |+||++.+.+ .+|++++|+++||.||||+.|+..||..+.
T Consensus 2 ~~vIiDtD~GiDDa~AL~~al~~p--~i~l~gIt~v~GN~~~~~~-~~na~~ll~~~g~~dIPV~~Ga~~pl~~~~---- 74 (314)
T 2mas_A 2 KKIILDCDPGLDDAVAILLAHGNP--EIELLAITTVVGNQTLAKV-TRNAQLVADIAGITGVPIAAGCDKPLVRKI---- 74 (314)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHCT--TEEEEEEEECSSSSCHHHH-HHHHHHHHHHTTCCSCCEEECCSSCSSSCC----
T ss_pred CEEEEECCCChHHHHHHHHHHhCC--CCEEEEEEEccCCcCHHHH-HHHHHHHHHHhCCCCCCEEeCCCcccCCCC----
Confidence 689999999999999999999999 89999999 7899998764 579999999999999999999999997642
Q ss_pred CCCCCCcccccccCCCCCCCccccccccCCCCCCccccccccccccCCCCCCCCCccCchhHHHHHHHHHHhcCCCCcEE
Q 003794 486 PIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKIT 565 (795)
Q Consensus 486 ~~~~~~~~~~~~hG~dGlgd~~~~~g~~~~lP~~~~~~~~~~~~~~~~p~~~d~~~~~~~~A~~~~~~i~~~~~~~~~Vt 565 (795)
.++ ...||.+||++. .+|++... .....+|+++|.+++++ .++++||
T Consensus 75 -----~~a-~~~hG~~Glg~~--------~~p~~~~~------------------~~~~~~A~~~i~~~~~~-~~~~~vt 121 (314)
T 2mas_A 75 -----MTA-GHIHGESGMGTV--------AYPAEFKN------------------KVDERHAVNLIIDLVMS-HEPKTIT 121 (314)
T ss_dssp -----CCC-HHHHCSSSSTTC--------CCCSSCSS------------------CBCSSCHHHHHHHHHHH-SCTTCEE
T ss_pred -----CCc-cccCCCCCCCCC--------CCCCcccc------------------ccCCccHHHHHHHHHHh-hCCCCEE
Confidence 122 346999999876 36654221 02356799999988885 2557999
Q ss_pred EEEecchhHHHHHH-hCCCcccccCeEEEecCCCCCCCCCCCccccCCCCcccCCCCCCHHHHHHHHhcCCceEEecccc
Q 003794 566 ILTNGPLTNLAQII-GLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHM 644 (795)
Q Consensus 566 Ila~GPLTNLA~al-~~P~i~~~I~~vviMGG~~~~~~~~GNv~~~~~~~~aEfN~~~DP~AA~iV~~s~~~itlipldv 644 (795)
||++|||||||.|+ ++|++.++|++||||||++. .||++ +.||||+|+||+||++||+|++|++|+|||+
T Consensus 122 iva~GPLTNlA~al~~~P~i~~~i~~iviMGG~~~----~GN~t-----p~aEfN~~~DPeAA~~V~~s~~~i~~v~ldv 192 (314)
T 2mas_A 122 LVPTGGLTNIAMAARLEPRIVDRVKEVVLMGGGYH----EGNAT-----SVAEFNIIIDPEAAHIVFNESWQVTMVGLDL 192 (314)
T ss_dssp EEECSCSHHHHHHHHHCTHHHHHSCEEEEECCCSS----CCSSS-----SSCCHHHHTCHHHHHHHHHSSSCEEEECHHH
T ss_pred EEEeccHHHHHHHHHHChhHHhhCCEEEEeCCccc----CCCCC-----chhHHHhhcCHHHHHHHHhCCCCEEEeChhh
Confidence 99999999999999 99999999999999999993 59986 5899999999999999999999999999999
Q ss_pred chhccccHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHhcccccccCccccceeeeeeeccCCccceeeEEEEEEEeecC
Q 003794 645 QRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKSLEIISDG 724 (795)
Q Consensus 645 t~~~~~~~~~l~~l~~~~~tp~a~fl~~ll~~~~~~~~~~~~~~~~~~~l~D~Laaa~l~~p~~l~~~~~~~~v~Ve~~g 724 (795)
|+++.++++++++|+..+ +|.++|+.+++++|.++.+.. +...++++||++|++|+++| +++ +++..+++|+++|
T Consensus 193 t~~~~~t~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~--~g~~~~~lhD~lava~~~~p-~~~-~~~~~~v~Ve~~g 267 (314)
T 2mas_A 193 THQALATPPILQRVKEVD-TNPARFMLEIMDYYTKIYQSN--RYMAAAAVHDPCAVAYVIDP-SVM-TTERVPVDIELTG 267 (314)
T ss_dssp HTTCEECHHHHHHHHTTC-SHHHHHHHHHHHHHHHHHHST--TCCSSEECCHHHHHHHHHCG-GGE-EEEECCEEECSSC
T ss_pred hcccccCHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHHhc--cCCCCCcCCcHHHHHHHcCh-hhe-EEEEEeEEEEeCC
Confidence 999999999999998765 799999999999998776542 22236889999999999999 576 5778899999987
Q ss_pred CcccceeEEEecCC----CcceEEEeecCHHHHHHHHHHHHhcc
Q 003794 725 DISKVGQIIVNQEQ----GKLVKVLESLNVAVYYDHFAEVLGDH 764 (795)
Q Consensus 725 ~~~t~G~tv~d~~~----~~~v~v~~~vD~~~f~~~l~~~L~~~ 764 (795)
. +++|+|++|+.. ++|++|++++|.++|+++|.++|.+.
T Consensus 268 ~-~t~G~tv~d~~~~~~~~~~~~v~~~vD~~~f~~~~~~~l~~~ 310 (314)
T 2mas_A 268 K-LTLGMTVADFRNPRPEHCHTQVAVKLDFEKFWGLVLDALERI 310 (314)
T ss_dssp S-SCTTCEEECCCSSCCSSCSEEEEEEECHHHHHHHHHHHHHHH
T ss_pred C-CCCceEEEeccccCCCCCCEEEEeecCHHHHHHHHHHHHHhh
Confidence 5 699999999642 46899999999999999999999764
No 5
>3fz0_A Nucleoside hydrolase, putative; NH fold, open alpha/beta structure, glycosidase; HET: BTB; 2.50A {Trypanosoma brucei}
Probab=100.00 E-value=7.4e-59 Score=509.94 Aligned_cols=310 Identities=19% Similarity=0.252 Sum_probs=256.1
Q ss_pred CCCCcEEEEcCCCchHHHHHHHHHhCCCCceeEEEEE-EeCCCCchhHhHHHHHHHHHHhCCCCCcEeecccccccCCCC
Q 003794 404 LMGKPVVFDIDMSAGDFLALIYLLKLPVELINLKGIL-VSSTGWATSATVDVVYDLLHMMGRDDIPVGLGDVFAVGEVNP 482 (795)
Q Consensus 404 ~~~kkVIiDtD~g~DDalAL~~lL~~p~~~idl~gIt-v~Gn~~~~~a~~~~a~~iL~~~Gr~dIPV~~Ga~~pl~~~~~ 482 (795)
|+++|||||||+|+||++||+|||.+| +++|+||| |+||++.+++ .+|++++|+++|| ||||+.|+..||..+ .
T Consensus 4 m~~~kvIiD~D~G~DDa~Al~~al~~p--~i~l~gIt~v~GN~~~~~~-~~na~~ll~~~g~-dIPV~~Ga~~pl~~~-~ 78 (360)
T 3fz0_A 4 MVHRKLIIDTDCGGDDAIAIMLAMTQP--DVEVIAITVVWGNVEVNQG-MENIGKLLDLYDA-DIPFFRGAEGPLVGE-R 78 (360)
T ss_dssp -CEEEEEEEECCCHHHHHHHHHHHTST--TEEEEEEEECCSSSCHHHH-HHHHHHHHHHHTC-CCCEEECCSSCSSSS-C
T ss_pred CCCceEEEECCCChHHHHHHHHHHhCC--CCEEEEEEEecCCCCHHHH-HHHHHHHHHHcCC-CCCEEEcCCCCCCCC-c
Confidence 456899999999999999999999999 89999999 7899998874 5799999999999 999999999999654 1
Q ss_pred CCCCCCCCCcccccc--cCCCCCCCccccccccCCCCCCccccccccccccCCCCCCCCCccCchhHHHHHHHHHHhcCC
Q 003794 483 KFPPIGGCKYAKAIP--LGSGGFLDSDTLYGLARDLPRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEP 560 (795)
Q Consensus 483 ~~p~~~~~~~~~~~~--hG~dGlgd~~~~~g~~~~lP~~~~~~~~~~~~~~~~p~~~d~~~~~~~~A~~~~~~i~~~~~~ 560 (795)
+ ...+ ||.+|||+. .+|++++.. .+...+|+++|++++++ ++
T Consensus 79 ---------~-~~~~~~hG~~Glg~~--------~~p~~~~~~-----------------~~~~~~A~~~i~~~~~~-~~ 122 (360)
T 3fz0_A 79 ---------E-TVQWGGFGSDGFGDA--------GFPPSQRVA-----------------LQPKRHAALEILKILEE-AE 122 (360)
T ss_dssp ---------C-SCCCCTTCTTSSCSC--------CCCCCSHHH-----------------HSCCSCHHHHHHHHHHH-CC
T ss_pred ---------c-hHHHHhhcccCcCcc--------cCCCCcccc-----------------ccCCccHHHHHHHHHHh-cC
Confidence 1 2346 999999886 366543210 12356899999999987 41
Q ss_pred CCc---EEEEEecchhHHHHHH-hCCCccccc-----CeEEEecCCCCCCCCCCCccccCCCCcccCCCCCCHHHHHHHH
Q 003794 561 GSK---ITILTNGPLTNLAQII-GLQNSSSVI-----QDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVF 631 (795)
Q Consensus 561 ~~~---VtIla~GPLTNLA~al-~~P~i~~~I-----~~vviMGG~~~~~~~~GNv~~~~~~~~aEfN~~~DP~AA~iV~ 631 (795)
+++ ||||++|||||||.|+ ++|++.++| ++||||||++ ..+||++ +.||||+|+||+||++||
T Consensus 123 p~~~~~vtiva~GPLTNlA~al~~~P~~~~~ig~~kv~~iviMGG~~---~~~GN~t-----p~aEfN~~~DPeAA~~V~ 194 (360)
T 3fz0_A 123 PSDDVVYQLVALGPLTNVALALRLNPDLFSKLGTDTIPGIVIMNGTS---ESKGNSN-----MAAEFNSHCDPEAGVVVL 194 (360)
T ss_dssp CCSSEEEEEEECSCSHHHHHHHHHCGGGGGGSSCSSSCSEEEECCCS---SCCCSSS-----SSCCHHHHHCHHHHHHHH
T ss_pred CCCCceEEEEEecChHHHHHHHHhChHHHhhhccccCcEEEEECCCc---cCCCCCC-----CCcccccCcCHHHHHHHH
Confidence 345 9999999999999999 999999999 9999999999 5679986 589999999999999999
Q ss_pred hc-CC--ceEEeccccchhccccHHHHHHHHhcCCCchH----------HHHHHHHHHHHHHHHhcc-c----------c
Q 003794 632 ES-KL--EIKLIPLHMQRRVASFFKILHKLRDRKKTPES----------VFSQRLLQGLMTLQQSHH-S----------Y 687 (795)
Q Consensus 632 ~s-~~--~itlipldvt~~~~~~~~~l~~l~~~~~tp~a----------~fl~~ll~~~~~~~~~~~-~----------~ 687 (795)
+| ++ |++|+|||+|+++.++++++++|+..++.+.+ +|+.+++++|.++++... . .
T Consensus 195 ~s~g~~~~i~~v~ldvt~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~ 274 (360)
T 3fz0_A 195 QHKGWKCPVQLVNWEVTVNSPMTWGFYDKLVNRESTPNGRVAVNQNKWQEFIEKLFQRLEAFTRIHDDGTRADTGDAEAT 274 (360)
T ss_dssp HCSCCSSCEEEECHHHHHTSCEEHHHHHHHTTC-----------CCHHHHHHHHHHHHHHHHHC----------------
T ss_pred hCcCCCCCeEEECccceeeeecCHHHHHHHHhcCCCcccccccccchHHHHHHHHHHHHHHHHhhhcccccccccccccc
Confidence 99 65 99999999999999999999999876522266 999999999987754321 0 1
Q ss_pred cccCccccceeeeeeeccCCccceeeEEEEEEEeecCCcccceeEEEecCC----C------cceEEEeecCHHHHHHHH
Q 003794 688 HHVDTFLGEVLGAVILGGNPHLNQTYKIKSLEIISDGDISKVGQIIVNQEQ----G------KLVKVLESLNVAVYYDHF 757 (795)
Q Consensus 688 ~~~~~~l~D~Laaa~l~~p~~l~~~~~~~~v~Ve~~g~~~t~G~tv~d~~~----~------~~v~v~~~vD~~~f~~~l 757 (795)
...++.+||++|++|+++| +++.+.+..+|+||++|. .+||+|++|+.. . +|++|+++||.++|+++|
T Consensus 275 g~~~~~lHD~lava~~l~P-~l~~~~~~~~V~Ve~~g~-~trG~Tv~D~~~~~~~~~~~~~~~n~~V~~~vD~~~f~~~~ 352 (360)
T 3fz0_A 275 QDVTCVVPDAVAVLVAIRP-ESVLDSFLTYVTVELHGR-ETRGATCIDWYGTEQSMAKKGRWRNCNVITKVDNEMFLKAL 352 (360)
T ss_dssp --CEECCHHHHHHHHHHCG-GGEEEEEEECEEECSSCS-SCTTCEEECSSCCHHHHHHTTCCCCEEEEEEECHHHHHHHH
T ss_pred CcCCCccccHHHHHHHhCh-hheeeEEEEEEEEEeCCC-CcceEEEeccccccCcccccCCCCCeEEeEecCHHHHHHHH
Confidence 1123679999999999999 576446788999999985 799999999754 1 799999999999999999
Q ss_pred HHHHhcc
Q 003794 758 AEVLGDH 764 (795)
Q Consensus 758 ~~~L~~~ 764 (795)
.++|..+
T Consensus 353 ~~~l~~~ 359 (360)
T 3fz0_A 353 RDIVEYV 359 (360)
T ss_dssp HHHHTCC
T ss_pred HHHhccc
Confidence 9998654
No 6
>3t8i_A Purine nucleosidase, (IUNH-2); purine nucleoside hydrolase, thermostable protein, open (ALP structure, rossmann fold, NH-fold; 1.80A {Sulfolobus solfataricus}
Probab=100.00 E-value=1.6e-58 Score=498.28 Aligned_cols=297 Identities=20% Similarity=0.265 Sum_probs=255.0
Q ss_pred CcEEEEcCCCchHHHHHHHHHhCCCCceeEEEEE-EeCCCCchhHhHHHHHHHHHHhCCCCCcEeecccccccCCCCCCC
Q 003794 407 KPVVFDIDMSAGDFLALIYLLKLPVELINLKGIL-VSSTGWATSATVDVVYDLLHMMGRDDIPVGLGDVFAVGEVNPKFP 485 (795)
Q Consensus 407 kkVIiDtD~g~DDalAL~~lL~~p~~~idl~gIt-v~Gn~~~~~a~~~~a~~iL~~~Gr~dIPV~~Ga~~pl~~~~~~~p 485 (795)
||||||||+|+||++||++++ + ++||+||| |+||++.+++ .+|++++|+++||.||||++|+..||..+.
T Consensus 2 ~kvIiD~D~G~DDa~Allla~--~--~~~l~gIt~v~GN~~~~~~-~~na~~~l~~~g~~diPV~~Ga~~pl~~~~---- 72 (306)
T 3t8i_A 2 RKVIVDSDTATDDTIAILLAS--R--FFQLLGVTIVAGNVNYNQE-VKNALFTLEYIGKQDVPVYLGSQRPILGNW---- 72 (306)
T ss_dssp CEEEEEECCSTHHHHHHHHHH--H--HSEEEEEEECSSSSCHHHH-HHHHHHHHHHTTCTTSCEEECCSSCTTCCC----
T ss_pred cEEEEECCCChHHHHHHHHhC--C--CCEEEEEEEccCCCCHHHH-HHHHHHHHHhcCCCCCcEEEcCCccCCCCC----
Confidence 799999999999999996654 4 79999999 7899998874 579999999999999999999999996542
Q ss_pred CCCCCCcccccccCCCCCCCccccccccCCCCCCccccccccccccCCCCCCCCCccCchhHHHHHHHHHHhcCCCCcEE
Q 003794 486 PIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSKIT 565 (795)
Q Consensus 486 ~~~~~~~~~~~~hG~dGlgd~~~~~g~~~~lP~~~~~~~~~~~~~~~~p~~~d~~~~~~~~A~~~~~~i~~~~~~~~~Vt 565 (795)
.+ ....||.+|||+. .+|++... +...+|+++|.+++++ ++++||
T Consensus 73 -----~~-~~~~hG~~Glg~~--------~~p~~~~~-------------------~~~~~A~~~i~~~~~~--~~~~vt 117 (306)
T 3t8i_A 73 -----RT-VEEVHGSNGMSNW--------NYPEPNKR-------------------PEKEHAIDAILRLSKE--HEGELE 117 (306)
T ss_dssp -----CC-CHHHHCTTSSTTC--------CCCCCSCC-------------------CCSSCHHHHHHHHHHH--TTTTEE
T ss_pred -----cc-cccccCCCCCCcc--------CCCCccCC-------------------cCCccHHHHHHHHHHh--CCCCEE
Confidence 12 2357999999886 36654221 2346899999999886 447999
Q ss_pred EEEecchhHHHHHH-hCCCcccccCeEEEecCCCCCCCCCCCccccCCCCcccCCCCCCHHHHHHHHhcCCceEEecccc
Q 003794 566 ILTNGPLTNLAQII-GLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPLHM 644 (795)
Q Consensus 566 Ila~GPLTNLA~al-~~P~i~~~I~~vviMGG~~~~~~~~GNv~~~~~~~~aEfN~~~DP~AA~iV~~s~~~itlipldv 644 (795)
||++|||||||.|+ ++|++.++|++||+|||++ ..||++ +.||||+|+||+||++||+|++|++|+|||+
T Consensus 118 iva~GpLTNlA~al~~~P~i~~~i~~iviMGG~~----~~GN~t-----p~aEfN~~~DPeAA~~V~~s~~~i~~v~ldv 188 (306)
T 3t8i_A 118 ILAISPLTNIALAYLKDPSVVKRVKKIWIMGGAF----SKGNTT-----PIAEFNFWVDPEAAKIVLDAGFDITIVPWEV 188 (306)
T ss_dssp EEECSCSHHHHHHHHHCGGGGGTCCEEEEECCCS----SCCSSS-----SSCCHHHHHCHHHHHHHHHTTCCEEEECHHH
T ss_pred EEEecChHHHHHHHHHChhHHhhcCEEEEecCCC----CCCCCC-----CchhhccccCHHHHHHHHhCCCCceEecchh
Confidence 99999999999999 9999999999999999998 369987 5799999999999999999999999999999
Q ss_pred chhc-cccHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHhcccccccCccccceeeeeeeccCCccceeeEEEEEEEeec
Q 003794 645 QRRV-ASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKSLEIISD 723 (795)
Q Consensus 645 t~~~-~~~~~~l~~l~~~~~tp~a~fl~~ll~~~~~~~~~~~~~~~~~~~l~D~Laaa~l~~p~~l~~~~~~~~v~Ve~~ 723 (795)
|+++ .++++++++|++.+ ++.++|+.+++++|.++++... ...++.+||++|++++++| +++.+++..+|+|+++
T Consensus 189 t~~~~~~t~~~~~~l~~~~-~~~~~~~~~~~~~y~~~~~~~~--g~~g~~~hD~lava~~l~P-~l~~~~~~~~v~Ve~~ 264 (306)
T 3t8i_A 189 AEISGSLNERDWEYISKLN-TKLSNFFINVNKTLKEYTTKNQ--GISGSIHPDSLTVSIAHDN-SIILDSSLKYVDVELC 264 (306)
T ss_dssp HHHHSEEEHHHHHHHHHHC-CHHHHHHHHHTHHHHHHHHHHH--SSSEEECHHHHHHHHHHCG-GGEEEEEEECEEECCS
T ss_pred ccccccCCHHHHHHHHhhC-ChHHHHHHHHHHHHHHHHHhhc--CCCCCcCCCHHHhhhhccc-cceeEEEEEEEEEEEC
Confidence 9999 89999999998866 7999999999999887754322 2246789999999999999 5644567889999998
Q ss_pred CCcccceeEEEecCC----CcceEEEeecCHHHHHHHHHHHHh
Q 003794 724 GDISKVGQIIVNQEQ----GKLVKVLESLNVAVYYDHFAEVLG 762 (795)
Q Consensus 724 g~~~t~G~tv~d~~~----~~~v~v~~~vD~~~f~~~l~~~L~ 762 (795)
|. ++|+|++|+.. .+|++|++++|.++|+++|.++|.
T Consensus 265 g~--t~G~tv~D~~~~~~~~~n~~V~~~vD~~~f~~~~~~~l~ 305 (306)
T 3t8i_A 265 SK--SRGAMLIDWYSLHKNKPNAEIVLKADGGKFKNLLFNSLS 305 (306)
T ss_dssp GG--GTTCEEECTTCCSSCCCCEEEEEEECHHHHHHHHHHHHH
T ss_pred CC--CCeeEEecccccCCCCCCeEEEeccCHHHHHHHHHHHhh
Confidence 84 99999999753 469999999999999999999885
No 7
>2c40_A Inosine-uridine preferring nucleoside hydrolase F protein; spine; 2.2A {Bacillus anthracis}
Probab=100.00 E-value=2.9e-57 Score=491.62 Aligned_cols=302 Identities=20% Similarity=0.281 Sum_probs=247.1
Q ss_pred CcEEEEcCCCchHHHHHHHHHhCCCCceeEEEEE-EeCCCCchhHhHHHHHHHHHHhCCCCCcEeecccccccCCCCCCC
Q 003794 407 KPVVFDIDMSAGDFLALIYLLKLPVELINLKGIL-VSSTGWATSATVDVVYDLLHMMGRDDIPVGLGDVFAVGEVNPKFP 485 (795)
Q Consensus 407 kkVIiDtD~g~DDalAL~~lL~~p~~~idl~gIt-v~Gn~~~~~a~~~~a~~iL~~~Gr~dIPV~~Ga~~pl~~~~~~~p 485 (795)
||||||||+|+||++||+|||.+| ++||+||| |+||++.++ +.+|++++|+++||.||||++|+..|+... +
T Consensus 2 ~kvIiDtD~GiDDa~Al~~al~~p--~i~l~gIt~v~GN~~~~~-~~~na~~ll~~~g~~dIPV~~Ga~~pl~~~----~ 74 (312)
T 2c40_A 2 KKVYFNHDGGVDDLVSLFLLLQMD--NVELTGVSVIPADCYLEP-AMSASRKIIDRFGKNTIEVAASNSRGKNPF----P 74 (312)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTCT--TEEEEEEEECSSSSCHHH-HHHHHHHHHHHHCCSCCCEEECCCCCSSCC----C
T ss_pred CEEEEECCCChHHHHHHHHHHhCC--CCEEEEEEEecCCCcHHH-HHHHHHHHHHHcCCCCCCEecCCCccccCC----C
Confidence 689999999999999999999999 89999999 789998876 467999999999999999999999998531 1
Q ss_pred CCCCCCcccccccCC--CCCCCccccccccCCCCCCccccccccccccCCCCCCCCCccCchhHHHHHHHHHHhcCCCCc
Q 003794 486 PIGGCKYAKAIPLGS--GGFLDSDTLYGLARDLPRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIVESIEPGSK 563 (795)
Q Consensus 486 ~~~~~~~~~~~~hG~--dGlgd~~~~~g~~~~lP~~~~~~~~~~~~~~~~p~~~d~~~~~~~~A~~~~~~i~~~~~~~~~ 563 (795)
.....||. +|++.. ..|.... ......+|+++|.+++++ ++++
T Consensus 75 -------~~~~~~~~~~~g~~~~--------~~~~~~~------------------~~~~~~~A~~~i~~~~~~--~~~~ 119 (312)
T 2c40_A 75 -------KDWRMHAFYVDALPIL--------NESGKVV------------------THVAAKPAHHHLIETLLQ--TEEK 119 (312)
T ss_dssp -------HHHHTHHHHHHTCHHH--------HTTSCCC------------------SCBCSSCHHHHHHHHHHH--SSSC
T ss_pred -------cccccccccCCCcccC--------CCCCccc------------------CCCCCccHHHHHHHHHHh--CCCC
Confidence 01123554 443211 1111000 012346799999988886 4479
Q ss_pred EEEEEecchhHHHHHH-hCCCcccccCeEEEecCCCCCCCCCCCccccCCCCcccCCCCCCHHHHHHHHhcCCceEEecc
Q 003794 564 ITILTNGPLTNLAQII-GLQNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFESKLEIKLIPL 642 (795)
Q Consensus 564 VtIla~GPLTNLA~al-~~P~i~~~I~~vviMGG~~~~~~~~GNv~~~~~~~~aEfN~~~DP~AA~iV~~s~~~itlipl 642 (795)
||||++|||||||.|+ ++|++.++|++||||||++ ..+||+++++.++.||||+|+||+||++||+|++|++|+||
T Consensus 120 vtiva~GPLTNlA~al~~~P~i~~~i~~iviMGGa~---~~~GN~t~p~~~p~aEfN~~~DPeAA~~V~~s~~~i~~v~l 196 (312)
T 2c40_A 120 TTLLFTGPLTDLARALYEAPIIENKIKRLVWMGGTF---RTAGNVHEPEHDGTAEWNSFWDPEAVARVWEANIEIDLITL 196 (312)
T ss_dssp EEEEESSCSHHHHHHHHHCGGGGGGEEEEEEECCCC---SSCCSCCCTTCCSCCCHHHHHCHHHHHHHHHSSCCEEEECG
T ss_pred EEEEEcCcHHHHHHHHHHChhHHhhcCEEEEeCCcc---cCCCCccCCCCCCcchhhhccCHHHHHHHHcCCCCEEEEcc
Confidence 9999999999999999 9999999999999999999 45799987667889999999999999999999999999999
Q ss_pred ccchhccccHHHHHHHHhcCCCchHHHHHHHHHHH---HHHHHhcccccccCccccceeeeeeeccCCccceeeEEEEEE
Q 003794 643 HMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGL---MTLQQSHHSYHHVDTFLGEVLGAVILGGNPHLNQTYKIKSLE 719 (795)
Q Consensus 643 dvt~~~~~~~~~l~~l~~~~~tp~a~fl~~ll~~~---~~~~~~~~~~~~~~~~l~D~Laaa~l~~p~~l~~~~~~~~v~ 719 (795)
|+|+++.++++++++|++.++++.++|+.+++..+ ..+. ...++++||++|++|+++| +++ +++..+++
T Consensus 197 dvt~~~~~t~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~lhD~lava~~~~p-~l~-~~~~~~v~ 268 (312)
T 2c40_A 197 ESTNQVPLTIDIREQWAKERKYIGIDFLGQCYAIVPPLVHFA------KNSTYYLWDVLTAAFVGKA-DLA-KVQTINSI 268 (312)
T ss_dssp GGGTTCBCCHHHHHHHHHTTTSHHHHHHHHHHHTSCCC--------------CBCHHHHHHHHHHCG-GGS-EEEEEEEE
T ss_pred ccccceecCHHHHHHHHhcCCChHHHHHHHHHHhhhhhhhhc------ccCCCcccCHHHHHHHcCc-cce-eeEEEEEE
Confidence 99999999999999998866568888888776543 1110 1235789999999999999 577 57888999
Q ss_pred EeecCCcccceeEEEecCCCcceEEEeecCHHHHHHHHHHHHhcc
Q 003794 720 IISDGDISKVGQIIVNQEQGKLVKVLESLNVAVYYDHFAEVLGDH 764 (795)
Q Consensus 720 Ve~~g~~~t~G~tv~d~~~~~~v~v~~~vD~~~f~~~l~~~L~~~ 764 (795)
|+++| .++|+|++|+ .+++++|++++|.++|+++|.++|.+.
T Consensus 269 V~~~g--~~~G~tv~d~-~~~~~~v~~~vD~~~f~~~~~~~l~~~ 310 (312)
T 2c40_A 269 VHTYG--PSQGRTVETD-DGRPVHVVYDVNHDRFFDYITRLAKKV 310 (312)
T ss_dssp ECCSS--TTTTCEEEEE-EEEEEEEEECCCHHHHHHHHHHHHC-C
T ss_pred EEeCC--CCCceEEEec-CCCceEEEeecCHHHHHHHHHHHHhhc
Confidence 98875 6999999996 456799999999999999999998865
No 8
>3epw_A IAG-nucleoside hydrolase; rossmann fold, active site loops, aromatic stacking; HET: JMQ; 1.30A {Trypanosoma vivax} SCOP: c.70.1.1 PDB: 3epx_A* 1hoz_A 1hp0_A* 2ff1_A* 2ff2_A* 1kic_A* 1kie_A* 1r4f_A* 3b9g_A*
Probab=100.00 E-value=3.1e-57 Score=495.57 Aligned_cols=319 Identities=19% Similarity=0.260 Sum_probs=254.0
Q ss_pred CCCCCCcEEEEcCCCchHHHHHHHHHhCCCCc-eeEEEEE-EeCCCCchhHhHHHHHHHHHHhCCCC----CcEeecccc
Q 003794 402 KKLMGKPVVFDIDMSAGDFLALIYLLKLPVEL-INLKGIL-VSSTGWATSATVDVVYDLLHMMGRDD----IPVGLGDVF 475 (795)
Q Consensus 402 ~~~~~kkVIiDtD~g~DDalAL~~lL~~p~~~-idl~gIt-v~Gn~~~~~a~~~~a~~iL~~~Gr~d----IPV~~Ga~~ 475 (795)
+....+|||||||+|+||++||+|||.+| + +||+||| |+||++.+++ .+|++++|+++||.| |||++|+..
T Consensus 9 ~~~~~~~vilD~DpGiDDa~AL~~al~~p--~~iel~gITtv~GN~~~~~~-~~Nal~lL~~~g~~d~~~~IPV~~Ga~~ 85 (338)
T 3epw_A 9 HHGSAKNVVLDHDGNLDDFVAMVLLASNT--EKVRLIGALCTDADCFVENG-FNVTGKIMCLMHNNMNLPLFPIGKSAAT 85 (338)
T ss_dssp ----CEEEEEEECCSHHHHHHHHHHHHCT--TTEEEEEEEECSSSSCHHHH-HHHHHHHHHHHHHHHCCCCCCEEECCCC
T ss_pred ccCccceEEEECCCChHHHHHHHHHHhCC--CCeEEEEEEEeCCCChHHHH-HHHHHHHHHHhCCCCCCCccceEeCCCC
Confidence 34467899999999999999999999999 8 9999999 7899998874 579999999999988 999999999
Q ss_pred cccCCCCCCCCCCCCCcccccccCCCCCCCccccccccCCCCCCccccccccccccCCCCCCCCCccCchhHHHHHHHHH
Q 003794 476 AVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWKSIV 555 (795)
Q Consensus 476 pl~~~~~~~p~~~~~~~~~~~~hG~dGlgd~~~~~g~~~~lP~~~~~~~~~~~~~~~~p~~~d~~~~~~~~A~~~~~~i~ 555 (795)
|+... + .....||. |+++.. .++.+..... ++.|. ......+|+++|.+++
T Consensus 86 pl~~~----~-------~~~~~~~~-~~~~~~-------~~~~~g~~~l------~~~~~----~~~~~~~A~~~i~~~~ 136 (338)
T 3epw_A 86 AVNPF----P-------KEWRCLAK-NMDDMP-------ILNIPENVEL------WDKIK----AENEKYEGQQLLADLV 136 (338)
T ss_dssp CSSCC----C-------HHHHTHHH-HHHTCG-------GGCCHHHHHH------HHHHH----HHHHTSBHHHHHHHHH
T ss_pred CCCCC----C-------CcceeccC-cCCCCc-------cCCccccccc------CCCCC----CccCCccHHHHHHHHH
Confidence 98532 1 01123553 222210 1221100000 00000 0123568999999998
Q ss_pred HhcCCCCcEEEEEecchhHHHHHH-hC-CCcccccCeEEEecCCCCCCCCCCCccccCCCCcccCCCCCCHHHHHHHHh-
Q 003794 556 ESIEPGSKITILTNGPLTNLAQII-GL-QNSSSVIQDVYIVGGNKGQDNEKGNVFTVPSSKYAEFNMFLDPLAAKAVFE- 632 (795)
Q Consensus 556 ~~~~~~~~VtIla~GPLTNLA~al-~~-P~i~~~I~~vviMGG~~~~~~~~GNv~~~~~~~~aEfN~~~DP~AA~iV~~- 632 (795)
++ + +++||||++|||||||.|+ ++ |++.++|++||||||++ ..+||+++++.++.||||+|+||+||++||+
T Consensus 137 ~~-~-~~~vtiva~GpLTNlA~al~~~gP~~~~~i~~iviMGG~~---~~~GN~t~~~~~~~aEfN~~~DPeAA~~V~~~ 211 (338)
T 3epw_A 137 MN-S-EEKVTICVTGPLSNVAWCIDKYGEKFTSKVEECVIMGGAV---DVRGNVFLPSTDGTAEWNIYWDPASAKTVFGC 211 (338)
T ss_dssp HH-C-SSCEEEEECSCTHHHHHHHHHHTHHHHTTEEEEEEECCCS---SSCCSCCCTTSCSCCCHHHHHSHHHHHHHHTC
T ss_pred Hh-C-CCceEEEECCCchHHHHHHHHcCHHHHHhCCEEEEecCCC---CCCCCccccCCCCcchhccccCHHHHHHHHhh
Confidence 86 3 4799999999999999999 99 99999999999999999 5679998767788999999999999999999
Q ss_pred cCCceEEeccccchhccccHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHhcccccccCccccceeeeeeeccCCcccee
Q 003794 633 SKLEIKLIPLHMQRRVASFFKILHKLRDRKKTPESVFSQRLLQGLMTLQQSHHSYHHVDTFLGEVLGAVILGGNPHLNQT 712 (795)
Q Consensus 633 s~~~itlipldvt~~~~~~~~~l~~l~~~~~tp~a~fl~~ll~~~~~~~~~~~~~~~~~~~l~D~Laaa~l~~p~~l~~~ 712 (795)
|++|++|+|||+|+++.++++++++|+..+++|.++|+.+++..+..+.... ...++++||++|++|+++| +++ +
T Consensus 212 sg~~i~~vpLdvT~~~~~t~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~lhDplAva~~l~P-~l~-~ 286 (338)
T 3epw_A 212 PGLRRIMFSLDSTNTVPVRSPYVQRFGEQTNFLLSILVGTMWAMCTHCELLR---DGDGYYAWDALTAAYVVDQ-KVA-N 286 (338)
T ss_dssp TTCCEEEECHHHHTTCBCCHHHHHGGGGGTTSHHHHHHHHHHHTTTTHHHHS---TTCCCBCHHHHHHHHHHCG-GGC-E
T ss_pred cCCCEEEeCcccccCccCCHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHhhc---cCCCCcCchHHHHHHHcCc-cce-E
Confidence 9999999999999999999999999988765789999988877654333211 1246889999999999999 577 5
Q ss_pred eEEEEEEEeecCCcccceeEEEecCC-CcceEEEeecCHHHHHHHHHHHHhc
Q 003794 713 YKIKSLEIISDGDISKVGQIIVNQEQ-GKLVKVLESLNVAVYYDHFAEVLGD 763 (795)
Q Consensus 713 ~~~~~v~Ve~~g~~~t~G~tv~d~~~-~~~v~v~~~vD~~~f~~~l~~~L~~ 763 (795)
++..+|+|++++. .++|+|++|+.. ..|++|+++||.++|+++|+++|.+
T Consensus 287 ~~~~~v~Ve~~~g-~t~G~Tv~d~~~~~~n~~V~~~vD~~~F~~~~~~~l~~ 337 (338)
T 3epw_A 287 VDPVPIDVVVDKQ-PNEGATVRTDAENYPLTFVARNPEAEFFLDMLLRSARA 337 (338)
T ss_dssp EEEEEEEECCSSS-TTTTCEEECCCTTCCEEEEEESCCHHHHHHHHHHHTTC
T ss_pred EEEEEEEEEeCCC-CCCceEEEecCCCCCceEEeeccCHHHHHHHHHHHHhh
Confidence 6889999998543 799999999754 4689999999999999999999864
No 9
>1yoe_A Hypothetical protein YBEK; pyrimidine nucleoside hydrolase, bacterial nucleosidase, RIB enzyme-product complex, hydrolase; HET: RIB; 1.78A {Escherichia coli} PDB: 3g5i_A*
Probab=100.00 E-value=2.8e-46 Score=406.72 Aligned_cols=218 Identities=27% Similarity=0.327 Sum_probs=188.2
Q ss_pred CCCCCCCccccCCCCCCCCCCccCCCCCCCCcccccCCcccccccccccccCCCCCCCcCCCCCCCCCCCCCCCCCCCCC
Q 003794 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQRLYVNTNYGLRKAFLPQGGRKYAPLR 80 (795)
Q Consensus 1 ~~gr~dIPV~~Ga~~pl~~~~~~~~~v~g~~~~~~~g~~t~~~c~y~~~ip~~~~~~~hG~~Glg~~~lp~~~~~~~~~~ 80 (795)
++||.|||||+|++.||.++... +.++||.+|||+..+|++... .+
T Consensus 66 ~~g~~dIPV~~Ga~~Pl~~~~~~-------------------------------a~~~HG~~Glg~~~~p~~~~~---~~ 111 (322)
T 1yoe_A 66 LLNRTDIPVAGGAVKPLMRELII-------------------------------ADNVHGESGLDGPALPEPTFA---PQ 111 (322)
T ss_dssp HTTCTTSCEEECCSSCSSSCCCC-------------------------------C-----CCSSCSSCCCCCSSC---CC
T ss_pred HcCCCCCCEEeCCCccccCCCcc-------------------------------ccccCCCCCCCCcCCCCCcCC---CC
Confidence 37999999999999999876432 246788999999999987653 45
Q ss_pred CccHHHHHHHHhc--cCCeEEEEecchHHHHHHHHhCCchhhccCcEEEecCCCCCCCCCCCCCCCccccCCCCCCCCCC
Q 003794 81 QPTAQQVLINAIS--AGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDD 158 (795)
Q Consensus 81 ~~~Av~~li~~i~--~g~itlvaiGPLTNlA~al~~~P~l~~~ik~IviMGG~~~~~~~~~~~~~~~~~~~~~GN~~~~~ 158 (795)
+.+|+++|+++++ +++||||++|||||||+|++++|+++++||+||||||++.. ||
T Consensus 112 ~~~Av~~i~~~l~~~p~~vtiva~GPLTNlA~al~~~P~i~~~i~~iviMGGa~~~-----------------GN----- 169 (322)
T 1yoe_A 112 NCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGL-----------------GN----- 169 (322)
T ss_dssp SSCHHHHHHHHHHHCSSCEEEEECSCSHHHHHHHHHCGGGGGGEEEEEEECCCSSC-----------------CS-----
T ss_pred cchHHHHHHHHHHhCCCCEEEEEeccHHHHHHHHHHChHHHhhCCEEEEeCCCCCC-----------------CC-----
Confidence 6899999999996 58999999999999999999999999999999999999863 99
Q ss_pred CCCCCccCCCCCHHHHHHHHhcCCCEEEecCCCccccCCCHHHHHHHHHhcCChHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 003794 159 SNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPFHEAY 238 (795)
Q Consensus 159 ~tp~AEfN~~~DPeAA~iVl~sg~pitlVplDvT~~~~lt~~~~~~l~~~~~t~~a~~l~~~l~~~~~~~~~~~~~~~~~ 238 (795)
.+|.||||||+|||||++||+|++|++|||||+|+++.++++++++|... +++.++|+.+++.+|.+.+.....+..++
T Consensus 170 ~tp~AEfN~~~DPeAA~~V~~s~~~i~~v~ldvt~~~~~t~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 248 (322)
T 1yoe_A 170 WTPAAEFNIYVDPEAAEIVFQSGIPVVMAGLDVTHKAQIHVEDTERFRAI-GNPVSTIVAELLDFFLEYHKDEKWGFVGA 248 (322)
T ss_dssp SSSSCCHHHHHCHHHHHHHHTSSSCEEEECHHHHTTSEECHHHHHHHHHH-CSHHHHHHHHHHHHHHC-----CCCCSSE
T ss_pred CCcccHhhcccCHHHHHHHHhCCCCEEEECccccccccCCHHHHHHHHhh-CCcHHHHHHHHHHHHHHHHhhcccCCCCC
Confidence 79999999999999999999999999999999999999999999999874 57899999999998876443322345689
Q ss_pred cccccchHhHHhhhccCCCCCCCCCCccceEEEEEEEEecCc-cccccC
Q 003794 239 CMWDSFMAGVALSIMLNSSSHNGENACSEMEYMNLTVVTSNE-PYGISD 286 (795)
Q Consensus 239 ~l~D~lA~a~al~p~~~~~~~~~~p~~~~~~~~~v~V~t~g~-~~G~~~ 286 (795)
++||++|++++++| ++++.++++|+|+++|. +||+|.
T Consensus 249 ~lhD~lava~~~~P-----------~~~~~~~~~v~Ve~~g~~t~G~tv 286 (322)
T 1yoe_A 249 PLHDPCTIAWLLKP-----------ELFTSVERWVGVETQGKYTQGMTV 286 (322)
T ss_dssp ECCTHHHHHHHHCG-----------GGEEEEEECEEECCSCSSCTTCEE
T ss_pred ccccHHHhhheecc-----------cceEEEEEEEEEEeCCCCCCceEE
Confidence 99999999999995 99999999999999976 899985
No 10
>3t8j_A Purine nucleosidase, (IUNH-1); nucleoside hydrolase, thermostable protein, open (alpha,beta structure, rossmann fold, NH-fold; 1.60A {Sulfolobus solfataricus}
Probab=100.00 E-value=6.7e-46 Score=401.39 Aligned_cols=217 Identities=24% Similarity=0.333 Sum_probs=192.3
Q ss_pred CCCCCCCccccCCCCCCCCCCccCCCCCCCCcccccCCcccccccccccccCCCCCCCcCCCCCCCCCCCCCCCCCCCCC
Q 003794 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQRLYVNTNYGLRKAFLPQGGRKYAPLR 80 (795)
Q Consensus 1 ~~gr~dIPV~~Ga~~pl~~~~~~~~~v~g~~~~~~~g~~t~~~c~y~~~ip~~~~~~~hG~~Glg~~~lp~~~~~~~~~~ 80 (795)
++|| |||||+|+..||.++...+ .++||.+|||+..+|++... .+
T Consensus 53 ~~g~-diPV~~Ga~~Pl~~~~~~a-------------------------------~~~hG~~Glg~~~~p~~~~~---~~ 97 (311)
T 3t8j_A 53 QVNR-EIPVYPGANKPLLKNYITV-------------------------------EKVHGKGGIGDVTVEPKRLK---AQ 97 (311)
T ss_dssp HTTC-CCCEEECCSSCSSSCCCCC-------------------------------HHHHCTTSSSSCCCCCSSCC---CC
T ss_pred HcCC-CCCEEECCCCCCCCCCccc-------------------------------hhhcCCCCCCCCCCCCCCCC---CC
Confidence 3799 9999999999999865432 46778999999999886653 45
Q ss_pred CccHHHHHHHHhc--cCCeEEEEecchHHHHHHHHhCCchhhccCcEEEecCCCCCCCCCCCCCCCccccCCCCCCCCCC
Q 003794 81 QPTAQQVLINAIS--AGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDD 158 (795)
Q Consensus 81 ~~~Av~~li~~i~--~g~itlvaiGPLTNlA~al~~~P~l~~~ik~IviMGG~~~~~~~~~~~~~~~~~~~~~GN~~~~~ 158 (795)
+++|+++|+++++ +++||||++|||||||+|++++|+++++||+||||||++.. +||
T Consensus 98 ~~~A~~~i~~~~~~~~~~vtiva~GpLTNlA~al~~~P~i~~~i~~iviMGG~~~~----------------~GN----- 156 (311)
T 3t8j_A 98 EKHAALAIIDLANEYAGELEFLAISPLTNLALAYLLDNSIVKKIKKVWVMGGAVFG----------------IGN----- 156 (311)
T ss_dssp SSCHHHHHHHHHHHTTTTEEEEECSCSHHHHHHHHHCTTHHHHEEEEEEECCCTTS----------------CCS-----
T ss_pred CchHHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHChHHHhhcCEEEEcCCcccC----------------CCC-----
Confidence 6899999999997 58999999999999999999999999999999999999875 499
Q ss_pred CCCCCccCCCCCHHHHHHHHhcCCCEEEecCCCccccCCCHHHHHHHHHhcCChHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 003794 159 SNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPFHEAY 238 (795)
Q Consensus 159 ~tp~AEfN~~~DPeAA~iVl~sg~pitlVplDvT~~~~lt~~~~~~l~~~~~t~~a~~l~~~l~~~~~~~~~~~~~~~~~ 238 (795)
.+|.||||||+|||||++||+|++|++|||||+|++..+|++++++|.+ .+++.++|+.+++++|.+++... .+..++
T Consensus 157 ~tp~aEfN~~~DPeAA~~V~~sg~~i~~v~ldvt~~~~lt~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~-~g~~g~ 234 (311)
T 3t8j_A 157 ITPVAEFNIWVDPDAAKIVFNAGFDITMIPWDVIINYPVTDEEWNVIKN-MKTRMSELYVSMYLHYRQYSSTV-QKINGH 234 (311)
T ss_dssp SSSSCCHHHHHCHHHHHHHHHTTCCEEEECHHHHTTSCBCHHHHHHHHT-SCSHHHHHHHHHHHHHHHHHHHT-SCCSSB
T ss_pred CCchhhhccccCHHHHHHHHhCCCCEEEecccccccccCCHHHHHHHHh-hCCHHHHHHHHHHHHHHHHHHhh-cCCCCC
Confidence 7999999999999999999999999999999999888899999999987 46899999999999887653332 445789
Q ss_pred cccccchHhHHhhhccCCCCCCCCCCccc-eEEEEEEEEecCc-cccccC
Q 003794 239 CMWDSFMAGVALSIMLNSSSHNGENACSE-MEYMNLTVVTSNE-PYGISD 286 (795)
Q Consensus 239 ~l~D~lA~a~al~p~~~~~~~~~~p~~~~-~~~~~v~V~t~g~-~~G~~~ 286 (795)
++||++|++++++| ++++ .++++|+|+++|. +||+|.
T Consensus 235 ~lhD~lava~~l~P-----------~l~~~~~~~~v~Ve~~g~~t~G~tv 273 (311)
T 3t8j_A 235 PHPDAITTAIAIDG-----------SIATRREKRFVVIDNTDNITRGMTL 273 (311)
T ss_dssp CCHHHHHHHHHHCG-----------GGEEEEEEEEEEECCSSSTTTTCEE
T ss_pred cCcCHHHHHHHhCH-----------HHhhccceeeEEEecCCCCCCceEE
Confidence 99999999999995 9997 6999999999986 899985
No 11
>1q8f_A Pyrimidine nucleoside hydrolase; open alpha-beta structure, NH-fold; 1.70A {Escherichia coli} SCOP: c.70.1.1 PDB: 3b9x_A* 3mkn_A* 3mkm_A*
Probab=100.00 E-value=6.4e-46 Score=402.50 Aligned_cols=215 Identities=24% Similarity=0.311 Sum_probs=191.7
Q ss_pred CCCCCccccCCCCCCCCCCccCCCCCCCCcccccCCcccccccccccccCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCc
Q 003794 3 NRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQRLYVNTNYGLRKAFLPQGGRKYAPLRQP 82 (795)
Q Consensus 3 gr~dIPV~~Ga~~pl~~~~~~~~~v~g~~~~~~~g~~t~~~c~y~~~ip~~~~~~~hG~~Glg~~~lp~~~~~~~~~~~~ 82 (795)
||.|||||+|++.||.++...+ .++||.+|||+..+|++... .++.
T Consensus 57 g~~dIPV~~Ga~~pl~~~~~~a-------------------------------~~~hG~~Glg~~~~p~~~~~---~~~~ 102 (313)
T 1q8f_A 57 LEINVPVYAGMPQPIMRQQIVA-------------------------------DNIHGDTGLDGPVFEPLTRQ---AEST 102 (313)
T ss_dssp TTCCCCEEECCSSCSSSCCCCC-------------------------------HHHHCTTSSCSCCCCCCCCC---CCSS
T ss_pred CCCCCCEEeCCCccccCCCCCc-------------------------------cccCCCcCCCCCCCCCCccC---CCCC
Confidence 8899999999999998764322 35788999999999987653 3568
Q ss_pred cHHHHHHHHhc--cCCeEEEEecchHHHHHHHHhCCchhhccCcEEEecCCCCCCCCCCCCCCCccccCCCCCCCCCCCC
Q 003794 83 TAQQVLINAIS--AGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDDSN 160 (795)
Q Consensus 83 ~Av~~li~~i~--~g~itlvaiGPLTNlA~al~~~P~l~~~ik~IviMGG~~~~~~~~~~~~~~~~~~~~~GN~~~~~~t 160 (795)
+|+++|+++++ +++||||++|||||||+|++++|+++++||+||||||++.. || .+
T Consensus 103 ~A~~~i~~~~~~~~~~vtiva~GPLTNlA~al~~~P~i~~~i~~iviMGG~~~~-----------------GN-----~t 160 (313)
T 1q8f_A 103 HAVKYIIDTLMASDGDITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAYGT-----------------GN-----FT 160 (313)
T ss_dssp CHHHHHHHHHHHSCSCEEEEECSCSHHHHHHHHHCGGGGGGEEEEEEECCCSSC-----------------CS-----SS
T ss_pred cHHHHHHHHHHhCCCCEEEEEeccHHHHHHHHHHCHHHHHhCCEEEEECCCCCC-----------------CC-----CC
Confidence 99999999997 58999999999999999999999999999999999999974 99 79
Q ss_pred CCCccCCCCCHHHHHHHHhcCCCEEEecCCCccccCCCHHHHHHHHHhcCChHHHHHHHHHHHHHHhhcCCCCCCCCCcc
Q 003794 161 PYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPFHEAYCM 240 (795)
Q Consensus 161 p~AEfN~~~DPeAA~iVl~sg~pitlVplDvT~~~~lt~~~~~~l~~~~~t~~a~~l~~~l~~~~~~~~~~~~~~~~~~l 240 (795)
|.||||||+|||||++||+|++|++|||||+|+++.++++++++|.+. +++.++|+.+++.+|.+.+.+. .+..++++
T Consensus 161 p~aEfN~~~DPeAA~~V~~s~~~i~~v~ldvt~~~~~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~g~~g~~l 238 (313)
T 1q8f_A 161 PSAEFNIFADPEAARVVFTSGVPLVMMGLDLTNQTVCTPDVIARMERA-GGPAGELFSDIMNFTLKTQFEN-YGLAGGPV 238 (313)
T ss_dssp SSCCHHHHTCHHHHHHHHTSCSCEEEECHHHHGGGEECHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHH-HCCSSEEC
T ss_pred chhHHhhccCHHHHHHHHhCCCCEEEeChhhhhcccCCHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHhc-cCcCCCcc
Confidence 999999999999999999999999999999999999999999999874 5799999999999887654431 23468999
Q ss_pred cccchHhHHhhhccCCCCCCCCCCccceEEEEEEEEecCc-cccccC
Q 003794 241 WDSFMAGVALSIMLNSSSHNGENACSEMEYMNLTVVTSNE-PYGISD 286 (795)
Q Consensus 241 ~D~lA~a~al~p~~~~~~~~~~p~~~~~~~~~v~V~t~g~-~~G~~~ 286 (795)
||++|++++++| +++++++++|+|+++|. +||+|.
T Consensus 239 hD~lava~~~~p-----------~~~~~~~~~v~Ve~~g~~t~G~tv 274 (313)
T 1q8f_A 239 HDATCIGYLINP-----------DGIKTQEMYVEVDVNSGPCYGRTV 274 (313)
T ss_dssp TTHHHHHHHHCG-----------GGEEEEEECEEECCCSSTTTTCEE
T ss_pred chHHHHHHHcCc-----------ceeEEEEEEEEEEeCCCCCCCeEE
Confidence 999999999995 99999999999999976 899985
No 12
>3t8i_A Purine nucleosidase, (IUNH-2); purine nucleoside hydrolase, thermostable protein, open (ALP structure, rossmann fold, NH-fold; 1.80A {Sulfolobus solfataricus}
Probab=100.00 E-value=2.9e-46 Score=402.79 Aligned_cols=217 Identities=22% Similarity=0.351 Sum_probs=191.3
Q ss_pred CCCCCCCccccCCCCCCCCCCccCCCCCCCCcccccCCcccccccccccccCCCCCCCcCCCCCCCCCCCCCCCCCCCCC
Q 003794 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQRLYVNTNYGLRKAFLPQGGRKYAPLR 80 (795)
Q Consensus 1 ~~gr~dIPV~~Ga~~pl~~~~~~~~~v~g~~~~~~~g~~t~~~c~y~~~ip~~~~~~~hG~~Glg~~~lp~~~~~~~~~~ 80 (795)
++||.|||||+|+++||.++...+ .++||.+|||+..+|++... .+
T Consensus 52 ~~g~~diPV~~Ga~~pl~~~~~~~-------------------------------~~~hG~~Glg~~~~p~~~~~---~~ 97 (306)
T 3t8i_A 52 YIGKQDVPVYLGSQRPILGNWRTV-------------------------------EEVHGSNGMSNWNYPEPNKR---PE 97 (306)
T ss_dssp HTTCTTSCEEECCSSCTTCCCCCC-------------------------------HHHHCTTSSTTCCCCCCSCC---CC
T ss_pred hcCCCCCcEEEcCCccCCCCCccc-------------------------------ccccCCCCCCccCCCCccCC---cC
Confidence 379999999999999998865432 35778999999999887653 45
Q ss_pred CccHHHHHHHHhc--cCCeEEEEecchHHHHHHHHhCCchhhccCcEEEecCCCCCCCCCCCCCCCccccCCCCCCCCCC
Q 003794 81 QPTAQQVLINAIS--AGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDD 158 (795)
Q Consensus 81 ~~~Av~~li~~i~--~g~itlvaiGPLTNlA~al~~~P~l~~~ik~IviMGG~~~~~~~~~~~~~~~~~~~~~GN~~~~~ 158 (795)
+++|+++|+++++ +++||||++|||||||+|++++|+++++||+||||||++. .||
T Consensus 98 ~~~A~~~i~~~~~~~~~~vtiva~GpLTNlA~al~~~P~i~~~i~~iviMGG~~~-----------------~GN----- 155 (306)
T 3t8i_A 98 KEHAIDAILRLSKEHEGELEILAISPLTNIALAYLKDPSVVKRVKKIWIMGGAFS-----------------KGN----- 155 (306)
T ss_dssp SSCHHHHHHHHHHHTTTTEEEEECSCSHHHHHHHHHCGGGGGTCCEEEEECCCSS-----------------CCS-----
T ss_pred CccHHHHHHHHHHhCCCCEEEEEecChHHHHHHHHHChhHHhhcCEEEEecCCCC-----------------CCC-----
Confidence 6899999999997 5899999999999999999999999999999999999975 399
Q ss_pred CCCCCccCCCCCHHHHHHHHhcCCCEEEecCCCcccc-CCCHHHHHHHHHhcCChHHHHHHHHHHHHHHhhcCCCCCCCC
Q 003794 159 SNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTI-PVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPFHEA 237 (795)
Q Consensus 159 ~tp~AEfN~~~DPeAA~iVl~sg~pitlVplDvT~~~-~lt~~~~~~l~~~~~t~~a~~l~~~l~~~~~~~~~~~~~~~~ 237 (795)
.+|.||||||+|||||++||+|++|++|||||+|+++ .++++++++|.+. +++.++|+.+++++|.+++... .+..+
T Consensus 156 ~tp~aEfN~~~DPeAA~~V~~s~~~i~~v~ldvt~~~~~~t~~~~~~l~~~-~~~~~~~~~~~~~~y~~~~~~~-~g~~g 233 (306)
T 3t8i_A 156 TTPIAEFNFWVDPEAAKIVLDAGFDITIVPWEVAEISGSLNERDWEYISKL-NTKLSNFFINVNKTLKEYTTKN-QGISG 233 (306)
T ss_dssp SSSSCCHHHHHCHHHHHHHHHTTCCEEEECHHHHHHHSEEEHHHHHHHHHH-CCHHHHHHHHHTHHHHHHHHHH-HSSSE
T ss_pred CCCchhhccccCHHHHHHHHhCCCCceEecchhccccccCCHHHHHHHHhh-CChHHHHHHHHHHHHHHHHHhh-cCCCC
Confidence 7999999999999999999999999999999999999 9999999999875 6899999999998886643322 34578
Q ss_pred CcccccchHhHHhhhccCCCCCCCCCCcc-ceEEEEEEEEecCccccccC
Q 003794 238 YCMWDSFMAGVALSIMLNSSSHNGENACS-EMEYMNLTVVTSNEPYGISD 286 (795)
Q Consensus 238 ~~l~D~lA~a~al~p~~~~~~~~~~p~~~-~~~~~~v~V~t~g~~~G~~~ 286 (795)
+++||++|++++++| +++ +.++++|+|+++|.+||+|.
T Consensus 234 ~~~hD~lava~~l~P-----------~l~~~~~~~~v~Ve~~g~t~G~tv 272 (306)
T 3t8i_A 234 SIHPDSLTVSIAHDN-----------SIILDSSLKYVDVELCSKSRGAML 272 (306)
T ss_dssp EECHHHHHHHHHHCG-----------GGEEEEEEECEEECCSGGGTTCEE
T ss_pred CcCCCHHHhhhhccc-----------cceeEEEEEEEEEEECCCCCeeEE
Confidence 999999999999995 875 58899999999999999984
No 13
>2mas_A Inosine-uridine nucleoside N-ribohydrolase; purine nucleoside hydrolase, IU-NH, purine nucleosidase; HET: PIR; 2.30A {Crithidia fasciculata} SCOP: c.70.1.1 PDB: 1mas_A* 1ezr_A
Probab=100.00 E-value=1.2e-45 Score=400.54 Aligned_cols=218 Identities=18% Similarity=0.303 Sum_probs=194.1
Q ss_pred CCCCCCCccccCCCCCCCCCCccCCCCCCCCcccccCCcccccccccccccCCCCCCCcCCCCCCCCCCCCCCCCCCCCC
Q 003794 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQRLYVNTNYGLRKAFLPQGGRKYAPLR 80 (795)
Q Consensus 1 ~~gr~dIPV~~Ga~~pl~~~~~~~~~v~g~~~~~~~g~~t~~~c~y~~~ip~~~~~~~hG~~Glg~~~lp~~~~~~~~~~ 80 (795)
++||.|||||+|+++||.++...+ .++||.+|||+..+|++... +.+
T Consensus 54 ~~g~~dIPV~~Ga~~pl~~~~~~a-------------------------------~~~hG~~Glg~~~~p~~~~~--~~~ 100 (314)
T 2mas_A 54 IAGITGVPIAAGCDKPLVRKIMTA-------------------------------GHIHGESGMGTVAYPAEFKN--KVD 100 (314)
T ss_dssp HTTCCSCCEEECCSSCSSSCCCCC-------------------------------HHHHCSSSSTTCCCCSSCSS--CBC
T ss_pred HhCCCCCCEEeCCCcccCCCCCCc-------------------------------cccCCCCCCCCCCCCCcccc--ccC
Confidence 479999999999999998865322 35788999999989887643 145
Q ss_pred CccHHHHHHHHhcc---CCeEEEEecchHHHHHHHHhCCchhhccCcEEEecCCCCCCCCCCCCCCCccccCCCCCCCCC
Q 003794 81 QPTAQQVLINAISA---GPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPD 157 (795)
Q Consensus 81 ~~~Av~~li~~i~~---g~itlvaiGPLTNlA~al~~~P~l~~~ik~IviMGG~~~~~~~~~~~~~~~~~~~~~GN~~~~ 157 (795)
+.+|+++|++++++ ++||||++|||||||+|++++|+++++||+||||||++. .||
T Consensus 101 ~~~A~~~i~~~~~~~~~~~vtiva~GPLTNlA~al~~~P~i~~~i~~iviMGG~~~-----------------~GN---- 159 (314)
T 2mas_A 101 ERHAVNLIIDLVMSHEPKTITLVPTGGLTNIAMAARLEPRIVDRVKEVVLMGGGYH-----------------EGN---- 159 (314)
T ss_dssp SSCHHHHHHHHHHHSCTTCEEEEECSCSHHHHHHHHHCTHHHHHSCEEEEECCCSS-----------------CCS----
T ss_pred CccHHHHHHHHHHhhCCCCEEEEEeccHHHHHHHHHHChhHHhhCCEEEEeCCccc-----------------CCC----
Confidence 68999999999964 899999999999999999999999999999999999995 399
Q ss_pred CCCCCCccCCCCCHHHHHHHHhcCCCEEEecCCCccccCCCHHHHHHHHHhcCChHHHHHHHHHHHHHHhhcCCCCCCCC
Q 003794 158 DSNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPFHEA 237 (795)
Q Consensus 158 ~~tp~AEfN~~~DPeAA~iVl~sg~pitlVplDvT~~~~lt~~~~~~l~~~~~t~~a~~l~~~l~~~~~~~~~~~~~~~~ 237 (795)
.+|.||||||+|||||++||+|++|++|||||+|+++.++++++++|.. .+++.++|+.+++.+|.+.+.+. .+..+
T Consensus 160 -~tp~aEfN~~~DPeAA~~V~~s~~~i~~v~ldvt~~~~~t~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~-~g~~~ 236 (314)
T 2mas_A 160 -ATSVAEFNIIIDPEAAHIVFNESWQVTMVGLDLTHQALATPPILQRVKE-VDTNPARFMLEIMDYYTKIYQSN-RYMAA 236 (314)
T ss_dssp -SSSSCCHHHHTCHHHHHHHHHSSSCEEEECHHHHTTCEECHHHHHHHHT-TCSHHHHHHHHHHHHHHHHHHST-TCCSS
T ss_pred -CCchhHHHhhcCHHHHHHHHhCCCCEEEeChhhhcccccCHHHHHHHHh-cCChHHHHHHHHHHHHHHHHHhc-cCCCC
Confidence 7999999999999999999999999999999999999999999999987 46799999999999988766543 34568
Q ss_pred CcccccchHhHHhhhccCCCCCCCCCCccceEEEEEEEEecCc-cccccC
Q 003794 238 YCMWDSFMAGVALSIMLNSSSHNGENACSEMEYMNLTVVTSNE-PYGISD 286 (795)
Q Consensus 238 ~~l~D~lA~a~al~p~~~~~~~~~~p~~~~~~~~~v~V~t~g~-~~G~~~ 286 (795)
+++||++|++++++| +++++++++|+|+++|. +||+|.
T Consensus 237 ~~lhD~lava~~~~p-----------~~~~~~~~~v~Ve~~g~~t~G~tv 275 (314)
T 2mas_A 237 AAVHDPCAVAYVIDP-----------SVMTTERVPVDIELTGKLTLGMTV 275 (314)
T ss_dssp EECCHHHHHHHHHCG-----------GGEEEEECCEEECSSCSSCTTCEE
T ss_pred CcCCcHHHHHHHcCh-----------hheEEEEEeEEEEeCCCCCCceEE
Confidence 999999999999995 99999999999999987 999985
No 14
>3fz0_A Nucleoside hydrolase, putative; NH fold, open alpha/beta structure, glycosidase; HET: BTB; 2.50A {Trypanosoma brucei}
Probab=100.00 E-value=8.7e-44 Score=390.53 Aligned_cols=218 Identities=23% Similarity=0.263 Sum_probs=182.3
Q ss_pred CCCCCCccccCCCCCCCCCCccCCCCCCCCcccccCCcccccccccccccCCCCCCC--cCCCCCCCCCCCCCCCCCCCC
Q 003794 2 MNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQRLYV--NTNYGLRKAFLPQGGRKYAPL 79 (795)
Q Consensus 2 ~gr~dIPV~~Ga~~pl~~~~~~~~~v~g~~~~~~~g~~t~~~c~y~~~ip~~~~~~~--hG~~Glg~~~lp~~~~~~~~~ 79 (795)
+|| |||||+|+..||.++ ..+ .++ ||.+|||+..+|++... .+.
T Consensus 60 ~g~-dIPV~~Ga~~pl~~~-~~~-------------------------------~~~~~hG~~Glg~~~~p~~~~~-~~~ 105 (360)
T 3fz0_A 60 YDA-DIPFFRGAEGPLVGE-RET-------------------------------VQWGGFGSDGFGDAGFPPSQRV-ALQ 105 (360)
T ss_dssp HTC-CCCEEECCSSCSSSS-CCS-------------------------------CCCCTTCTTSSCSCCCCCCSHH-HHS
T ss_pred cCC-CCCEEEcCCCCCCCC-cch-------------------------------HHHHhhcccCcCcccCCCCccc-ccc
Confidence 689 999999999999987 433 345 88999999988876431 124
Q ss_pred CCccHHHHHHHHhc---cCC---eEEEEecchHHHHHHHHhCCchhhcc-----CcEEEecCCCCCCCCCCCCCCCcccc
Q 003794 80 RQPTAQQVLINAIS---AGP---ITVFVMGSHTNFAIFLMNNPHLKKNI-----EHIYVMGGAIRSDCFNSTNSSQSEQC 148 (795)
Q Consensus 80 ~~~~Av~~li~~i~---~g~---itlvaiGPLTNlA~al~~~P~l~~~i-----k~IviMGG~~~~~~~~~~~~~~~~~~ 148 (795)
++++|+++|+++++ +++ ||||++|||||||+||+++|++.++| |+||||||++..
T Consensus 106 ~~~~A~~~i~~~~~~~~p~~~~~vtiva~GPLTNlA~al~~~P~~~~~ig~~kv~~iviMGG~~~~-------------- 171 (360)
T 3fz0_A 106 PKRHAALEILKILEEAEPSDDVVYQLVALGPLTNVALALRLNPDLFSKLGTDTIPGIVIMNGTSES-------------- 171 (360)
T ss_dssp CCSCHHHHHHHHHHHCCCCSSEEEEEEECSCSHHHHHHHHHCGGGGGGSSCSSSCSEEEECCCSSC--------------
T ss_pred CCccHHHHHHHHHHhcCCCCCceEEEEEecChHHHHHHHHhChHHHhhhccccCcEEEEECCCccC--------------
Confidence 56899999999996 466 99999999999999999999999999 999999999975
Q ss_pred CCCCCCCCCCCCCCCccCCCCCHHHHHHHHhc-CC--CEEEecCCCccccCCCHHHHHHHHHhcCCh-HH----------
Q 003794 149 DSIGNLYPDDSNPYAEFNIFSDPFAAYTVLHS-GI--PVTIIPLDATKTIPVSENFFVEFERRQNTY-EA---------- 214 (795)
Q Consensus 149 ~~~GN~~~~~~tp~AEfN~~~DPeAA~iVl~s-g~--pitlVplDvT~~~~lt~~~~~~l~~~~~t~-~a---------- 214 (795)
.|| .+|.||||||+|||||++||+| |+ |++|||||+|+++.++++++++|... +++ .+
T Consensus 172 --~GN-----~tp~aEfN~~~DPeAA~~V~~s~g~~~~i~~v~ldvt~~~~~t~~~~~~~~~~-~~~~~~~~~~~~~~~~ 243 (360)
T 3fz0_A 172 --KGN-----SNMAAEFNSHCDPEAGVVVLQHKGWKCPVQLVNWEVTVNSPMTWGFYDKLVNR-ESTPNGRVAVNQNKWQ 243 (360)
T ss_dssp --CCS-----SSSSCCHHHHHCHHHHHHHHHCSCCSSCEEEECHHHHHTSCEEHHHHHHHTTC------------CCHHH
T ss_pred --CCC-----CCCCcccccCcCHHHHHHHHhCcCCCCCeEEECccceeeeecCHHHHHHHHhc-CCCcccccccccchHH
Confidence 499 7999999999999999999999 65 99999999999999999999999764 344 56
Q ss_pred HHHHHHHHHHHHhhcCCC------------CCCCCCcccccchHhHHhhhccCCCCCCCCCCccc-eEEEEEEEEecCc-
Q 003794 215 QYCFQSLKMIRDTWSGSP------------PFHEAYCMWDSFMAGVALSIMLNSSSHNGENACSE-MEYMNLTVVTSNE- 280 (795)
Q Consensus 215 ~~l~~~l~~~~~~~~~~~------------~~~~~~~l~D~lA~a~al~p~~~~~~~~~~p~~~~-~~~~~v~V~t~g~- 280 (795)
+|+.+++++|.+++.... .+..++++||++|++++++| ++++ .++++|+|+++|.
T Consensus 244 ~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~g~~~~~lHD~lava~~l~P-----------~l~~~~~~~~V~Ve~~g~~ 312 (360)
T 3fz0_A 244 EFIEKLFQRLEAFTRIHDDGTRADTGDAEATQDVTCVVPDAVAVLVAIRP-----------ESVLDSFLTYVTVELHGRE 312 (360)
T ss_dssp HHHHHHHHHHHHHHC------------------CEECCHHHHHHHHHHCG-----------GGEEEEEEECEEECSSCSS
T ss_pred HHHHHHHHHHHHHHhhhccccccccccccccCcCCCccccHHHHHHHhCh-----------hheeeEEEEEEEEEeCCCC
Confidence 999999999876543210 12335789999999999995 9986 8999999999997
Q ss_pred cccccC
Q 003794 281 PYGISD 286 (795)
Q Consensus 281 ~~G~~~ 286 (795)
+||+|.
T Consensus 313 trG~Tv 318 (360)
T 3fz0_A 313 TRGATC 318 (360)
T ss_dssp CTTCEE
T ss_pred cceEEE
Confidence 999985
No 15
>2c40_A Inosine-uridine preferring nucleoside hydrolase F protein; spine; 2.2A {Bacillus anthracis}
Probab=100.00 E-value=1.3e-42 Score=376.61 Aligned_cols=225 Identities=19% Similarity=0.244 Sum_probs=174.2
Q ss_pred CCCCCCCccccCCCCCCCCCCccCCCCCCCCcccccCCcccccccccccccCCCCCCCcCCCCCCCCCCCCCCCCCCCCC
Q 003794 1 MMNRDDIPVGVGGEGGILPNGTILPDVGGYQPIIDQGMSTAGECRYRQAIPVGQRLYVNTNYGLRKAFLPQGGRKYAPLR 80 (795)
Q Consensus 1 ~~gr~dIPV~~Ga~~pl~~~~~~~~~v~g~~~~~~~g~~t~~~c~y~~~ip~~~~~~~hG~~Glg~~~lp~~~~~~~~~~ 80 (795)
++||+|||||+|+.+||.+... ...+|| ++.+|++....|.+.. .+.+
T Consensus 54 ~~g~~dIPV~~Ga~~pl~~~~~-~~~~~~-----------------------------~~~~g~~~~~~~~~~~--~~~~ 101 (312)
T 2c40_A 54 RFGKNTIEVAASNSRGKNPFPK-DWRMHA-----------------------------FYVDALPILNESGKVV--THVA 101 (312)
T ss_dssp HHCCSCCCEEECCCCCSSCCCH-HHHTHH-----------------------------HHHHTCHHHHTTSCCC--SCBC
T ss_pred HcCCCCCCEecCCCccccCCCc-cccccc-----------------------------ccCCCcccCCCCCccc--CCCC
Confidence 3699999999999999965321 111222 1124443222222111 1345
Q ss_pred CccHHHHHHHHhc--cCCeEEEEecchHHHHHHHHhCCchhhccCcEEEecCCCCCCCCCCCCCCCccccCCCCCCCCCC
Q 003794 81 QPTAQQVLINAIS--AGPITVFVMGSHTNFAIFLMNNPHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYPDD 158 (795)
Q Consensus 81 ~~~Av~~li~~i~--~g~itlvaiGPLTNlA~al~~~P~l~~~ik~IviMGG~~~~~~~~~~~~~~~~~~~~~GN~~~~~ 158 (795)
+.+|+++|+++++ +++||||++|||||||+|++++|+++++||+||||||++.. +||+.++.
T Consensus 102 ~~~A~~~i~~~~~~~~~~vtiva~GPLTNlA~al~~~P~i~~~i~~iviMGGa~~~----------------~GN~t~p~ 165 (312)
T 2c40_A 102 AKPAHHHLIETLLQTEEKTTLLFTGPLTDLARALYEAPIIENKIKRLVWMGGTFRT----------------AGNVHEPE 165 (312)
T ss_dssp SSCHHHHHHHHHHHSSSCEEEEESSCSHHHHHHHHHCGGGGGGEEEEEEECCCCSS----------------CCSCCCTT
T ss_pred CccHHHHHHHHHHhCCCCEEEEEcCcHHHHHHHHHHChhHHhhcCEEEEeCCcccC----------------CCCccCCC
Confidence 6899999999996 58999999999999999999999999999999999999975 49954334
Q ss_pred CCCCCccCCCCCHHHHHHHHhcCCCEEEecCCCccccCCCHHHHHHHHHhcCChHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 003794 159 SNPYAEFNIFSDPFAAYTVLHSGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPFHEAY 238 (795)
Q Consensus 159 ~tp~AEfN~~~DPeAA~iVl~sg~pitlVplDvT~~~~lt~~~~~~l~~~~~t~~a~~l~~~l~~~~~~~~~~~~~~~~~ 238 (795)
.+|.||||||+|||||++||+|++|++|||||+|+++.++++++++|.+...++.++|+.+++..+. ++.......++
T Consensus 166 ~~p~aEfN~~~DPeAA~~V~~s~~~i~~v~ldvt~~~~~t~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 243 (312)
T 2c40_A 166 HDGTAEWNSFWDPEAVARVWEANIEIDLITLESTNQVPLTIDIREQWAKERKYIGIDFLGQCYAIVP--PLVHFAKNSTY 243 (312)
T ss_dssp CCSCCCHHHHHCHHHHHHHHHSSCCEEEECGGGGTTCBCCHHHHHHHHHTTTSHHHHHHHHHHHTSC--CC--------C
T ss_pred CCCcchhhhccCHHHHHHHHcCCCCEEEEccccccceecCHHHHHHHHhcCCChHHHHHHHHHHhhh--hhhhhcccCCC
Confidence 4699999999999999999999999999999999999999999999987544588888877654221 00000123578
Q ss_pred cccccchHhHHhhhccCCCCCCCCCCccceEEEEEEEEecCccccccC
Q 003794 239 CMWDSFMAGVALSIMLNSSSHNGENACSEMEYMNLTVVTSNEPYGISD 286 (795)
Q Consensus 239 ~l~D~lA~a~al~p~~~~~~~~~~p~~~~~~~~~v~V~t~g~~~G~~~ 286 (795)
++||++|++++++| ++++.++++|+|+++|.+||++.
T Consensus 244 ~lhD~lava~~~~p-----------~l~~~~~~~v~V~~~g~~~G~tv 280 (312)
T 2c40_A 244 YLWDVLTAAFVGKA-----------DLAKVQTINSIVHTYGPSQGRTV 280 (312)
T ss_dssp BCHHHHHHHHHHCG-----------GGSEEEEEEEEECCSSTTTTCEE
T ss_pred cccCHHHHHHHcCc-----------cceeeEEEEEEEEeCCCCCceEE
Confidence 99999999999995 99999999999999988899885
No 16
>3epw_A IAG-nucleoside hydrolase; rossmann fold, active site loops, aromatic stacking; HET: JMQ; 1.30A {Trypanosoma vivax} SCOP: c.70.1.1 PDB: 3epx_A* 1hoz_A 1hp0_A* 2ff1_A* 2ff2_A* 1kic_A* 1kie_A* 1r4f_A* 3b9g_A*
Probab=100.00 E-value=1.6e-41 Score=371.22 Aligned_cols=178 Identities=23% Similarity=0.361 Sum_probs=153.1
Q ss_pred CCccHHHHHHHHhc--cCCeEEEEecchHHHHHHHHhC-CchhhccCcEEEecCCCCCCCCCCCCCCCccccCCCCCCCC
Q 003794 80 RQPTAQQVLINAIS--AGPITVFVMGSHTNFAIFLMNN-PHLKKNIEHIYVMGGAIRSDCFNSTNSSQSEQCDSIGNLYP 156 (795)
Q Consensus 80 ~~~~Av~~li~~i~--~g~itlvaiGPLTNlA~al~~~-P~l~~~ik~IviMGG~~~~~~~~~~~~~~~~~~~~~GN~~~ 156 (795)
++.+|+++|+++++ +++||||++|||||||+|++++ |+++++||+||||||++.. +||+..
T Consensus 124 ~~~~A~~~i~~~~~~~~~~vtiva~GpLTNlA~al~~~gP~~~~~i~~iviMGG~~~~----------------~GN~t~ 187 (338)
T 3epw_A 124 EKYEGQQLLADLVMNSEEKVTICVTGPLSNVAWCIDKYGEKFTSKVEECVIMGGAVDV----------------RGNVFL 187 (338)
T ss_dssp HTSBHHHHHHHHHHHCSSCEEEEECSCTHHHHHHHHHHTHHHHTTEEEEEEECCCSSS----------------CCSCCC
T ss_pred CCccHHHHHHHHHHhCCCceEEEECCCchHHHHHHHHcCHHHHHhCCEEEEecCCCCC----------------CCCccc
Confidence 46799999999997 5899999999999999999999 9999999999999999975 499533
Q ss_pred CCCCCCCccCCCCCHHHHHHHHh-cCCCEEEecCCCccccCCCHHHHHHHHHhcCChHHHHHHHHHHHHHHhhcCCCCCC
Q 003794 157 DDSNPYAEFNIFSDPFAAYTVLH-SGIPVTIIPLDATKTIPVSENFFVEFERRQNTYEAQYCFQSLKMIRDTWSGSPPFH 235 (795)
Q Consensus 157 ~~~tp~AEfN~~~DPeAA~iVl~-sg~pitlVplDvT~~~~lt~~~~~~l~~~~~t~~a~~l~~~l~~~~~~~~~~~~~~ 235 (795)
+..+|.||||||+|||||++||+ |++|++|||||+|+++.++++++++|.+..+++.++|+.+++.++.. |... ...
T Consensus 188 ~~~~~~aEfN~~~DPeAA~~V~~~sg~~i~~vpLdvT~~~~~t~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~ 265 (338)
T 3epw_A 188 PSTDGTAEWNIYWDPASAKTVFGCPGLRRIMFSLDSTNTVPVRSPYVQRFGEQTNFLLSILVGTMWAMCTH-CELL-RDG 265 (338)
T ss_dssp TTSCSCCCHHHHHSHHHHHHHHTCTTCCEEEECHHHHTTCBCCHHHHHGGGGGTTSHHHHHHHHHHHTTTT-HHHH-STT
T ss_pred cCCCCcchhccccCHHHHHHHHhhcCCCEEEeCcccccCccCCHHHHHHHHhhCCCHHHHHHHHHHHHHHH-HHhh-ccC
Confidence 33448999999999999999999 99999999999999999999999999875446889998887654321 1100 123
Q ss_pred CCCcccccchHhHHhhhccCCCCCCCCCCccceEEEEEEEEe-cCccccccC
Q 003794 236 EAYCMWDSFMAGVALSIMLNSSSHNGENACSEMEYMNLTVVT-SNEPYGISD 286 (795)
Q Consensus 236 ~~~~l~D~lA~a~al~p~~~~~~~~~~p~~~~~~~~~v~V~t-~g~~~G~~~ 286 (795)
.++++||++|++++++| +++++++++|+|++ +|.+||+|.
T Consensus 266 ~g~~lhDplAva~~l~P-----------~l~~~~~~~v~Ve~~~g~t~G~Tv 306 (338)
T 3epw_A 266 DGYYAWDALTAAYVVDQ-----------KVANVDPVPIDVVVDKQPNEGATV 306 (338)
T ss_dssp CCCBCHHHHHHHHHHCG-----------GGCEEEEEEEEECCSSSTTTTCEE
T ss_pred CCCcCchHHHHHHHcCc-----------cceEEEEEEEEEEeCCCCCCceEE
Confidence 68899999999999995 99999999999999 567999985
No 17
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=98.37 E-value=2e-06 Score=95.76 Aligned_cols=141 Identities=18% Similarity=0.275 Sum_probs=85.8
Q ss_pred CCCcEEEEcCCC--chHHHHHHHHHhCCCCceeEEEEEEeCCCCc----hhHhH----HHHHHHHHHhCCC--CCcEeec
Q 003794 405 MGKPVVFDIDMS--AGDFLALIYLLKLPVELINLKGILVSSTGWA----TSATV----DVVYDLLHMMGRD--DIPVGLG 472 (795)
Q Consensus 405 ~~kkVIiDtD~g--~DDalAL~~lL~~p~~~idl~gItv~Gn~~~----~~a~~----~~a~~iL~~~Gr~--dIPV~~G 472 (795)
.+.+||||||++ +||..+|+.+|..+. +|+|.||+.+...|. ....+ +.-..++..|... ..|..
T Consensus 27 ~k~RviI~TDi~nEpDD~~Slvr~Llysn-~~dieGivat~s~~~~~~~~~~~i~~ii~aY~~v~~nL~~h~~~yP~~-- 103 (437)
T 2yhg_A 27 GRYRVIHTTDMGADPDDEQSLVRQLVMAN-EYDLEGIITTTGCWKKSTSNTAYVDRILNAYSQAYPNLSKHAEGFPTP-- 103 (437)
T ss_dssp CCCEEEEEECTTSCTHHHHHHHHHHHTGG-GSEEEEEEECCBTTBCCCCCCHHHHHHHHHHHHHHHHHTTTSTTCCCH--
T ss_pred CCceEEEeCCCCCCCccHHHHHHHHhCcc-cceEeEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCH--
Confidence 356899999976 999999999998862 699999994322221 10011 1122444444432 12210
Q ss_pred ccccccCCCCCCCCCCCCCcccccccCCCCCCCccccccccCCCCCCccccccccccccCCCCCCCCCccCchhHHHHHH
Q 003794 473 DVFAVGEVNPKFPPIGGCKYAKAIPLGSGGFLDSDTLYGLARDLPRSPRRYTAENSVRFGASQDNDDPELRQPLAVDVWK 552 (795)
Q Consensus 473 a~~pl~~~~~~~p~~~~~~~~~~~~hG~dGlgd~~~~~g~~~~lP~~~~~~~~~~~~~~~~p~~~d~~~~~~~~A~~~~~ 552 (795)
+ ....-+..|..+ ||+ +.. | +.....|.++|+
T Consensus 104 ------~-----------~Lrs~v~~G~~~-------ygm----~~~------------g--------~~~~s~gs~~Ii 135 (437)
T 2yhg_A 104 ------A-----------YLDSINVMGQRG-------YGM----GDV------------G--------SGKDSAGSNLII 135 (437)
T ss_dssp ------H-----------HHHHTEEECCSS-------CGG----GGC------------S--------TTCCCHHHHHHH
T ss_pred ------H-----------HhhhhhccCCcc-------cCC----CcC------------C--------CCCCChHHHHHH
Confidence 0 000011233211 111 000 0 011256888887
Q ss_pred HHHHhcCCCCcEEEEEecchhHHHHHH-hC---------CCcccccCeEEEecCCC
Q 003794 553 SIVESIEPGSKITILTNGPLTNLAQII-GL---------QNSSSVIQDVYIVGGNK 598 (795)
Q Consensus 553 ~i~~~~~~~~~VtIla~GPLTNLA~al-~~---------P~i~~~I~~vviMGG~~ 598 (795)
+.+++ ..+.+|.|++-|.+|+||.|| +. |+|.+|| +||+.||.=
T Consensus 136 ~~~~~-~d~rPL~i~~wGG~n~lAqAL~~~~~~~~~~~~~~i~~kl-rvy~Ig~qd 189 (437)
T 2yhg_A 136 AAVDK-DDPRPVWATCWGGCNTIAQAVWKVQNTRSQAQLDAFISKL-RVYDILGQD 189 (437)
T ss_dssp HHHHS-SCSSCEEEEESSCSHHHHHHHHHHHHHSCHHHHHHHHHTE-EEEEESCCS
T ss_pred HHHhC-CCCCceEEEEecCHhHHHHHHHHhhhhcCcchhHHHhhcE-EEEEecCcc
Confidence 77764 345789999999999999999 76 8999999 699998854
No 18
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=93.42 E-value=0.052 Score=60.56 Aligned_cols=50 Identities=14% Similarity=0.278 Sum_probs=44.5
Q ss_pred CccHHHHHHHHhc---cCCeEEEEecchHHHHHHHHhC---------CchhhccCcEEEecCC
Q 003794 81 QPTAQQVLINAIS---AGPITVFVMGSHTNFAIFLMNN---------PHLKKNIEHIYVMGGA 131 (795)
Q Consensus 81 ~~~Av~~li~~i~---~g~itlvaiGPLTNlA~al~~~---------P~l~~~ik~IviMGG~ 131 (795)
+.+|.++|++.+. +.+|.|+|.|.+|+||.||... |+|.+|| +||..||.
T Consensus 127 ~s~gs~~Ii~~~~~~d~rPL~i~~wGG~n~lAqAL~~~~~~~~~~~~~~i~~kl-rvy~Ig~q 188 (437)
T 2yhg_A 127 DSAGSNLIIAAVDKDDPRPVWATCWGGCNTIAQAVWKVQNTRSQAQLDAFISKL-RVYDILGQ 188 (437)
T ss_dssp CCHHHHHHHHHHHSSCSSCEEEEESSCSHHHHHHHHHHHHHSCHHHHHHHHHTE-EEEEESCC
T ss_pred CChHHHHHHHHHhCCCCCceEEEEecCHhHHHHHHHHhhhhcCcchhHHHhhcE-EEEEecCc
Confidence 3689999999885 3789999999999999999999 9999999 78888864
Done!