Your job contains 1 sequence.
>003795
MACNFSFPSSLSLDIFPTKPKSKNPKNTQKFQFCTPFSCKNQNFNPQNEDRNKNQNSKRP
HLGLLTIPVTLTIISTSLAQKPAFAATKVASGKKKKSQKKTQEALTPEQLKKWSKDLPIV
SDRIAYTEIFSLKDEGKLKHVIKSPSGSLRQKAEPVLVVLEDSRVLRTVLPSLDSNRKFW
ESWDELKIDSLCVNAYTPPLKKPEVPNPYLGFLWRVPASMLSTFRPKKESKRAAEIRRAR
EELKRQRKEELEKMREESEMMEKAMDMQKKEEERRRKKEIRLQKYEESLQDARDNYRYMA
NVWENLAKDSTVATGLGIVFFVIFYRTVVLNYRRQKKDYEDRLKIEKAEREERKKLRQLE
RELEGLEGADDEIEQGEAEQNPHLKMAMQFMKSGARVRRAYGKGLPQYLERGVDVKFSDV
AGLGKIRLELEEIVKFFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFF
SISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDAT
LNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVH
ARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEER
GMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMK
FKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFVLGGLSDK
HFGLSNFWVADRINV
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 003795
(795 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2094892 - symbol:EMB2083 "embryo defective 208... 2061 7.6e-273 2
UNIPROTKB|Q3AFJ8 - symbol:ftsH "ATP-dependent zinc metall... 707 7.6e-72 2
TIGR_CMR|CHY_0214 - symbol:CHY_0214 "cell division protei... 707 7.6e-72 2
UNIPROTKB|Q5LNU8 - symbol:ftsH "ATP-dependent zinc metall... 692 2.9e-70 2
TIGR_CMR|SPO_3105 - symbol:SPO_3105 "ATP-dependent metall... 692 2.9e-70 2
TAIR|locus:2157637 - symbol:VAR1 "VARIEGATED 1" species:3... 686 2.9e-70 2
TAIR|locus:2011952 - symbol:FTSH1 "FTSH protease 1" speci... 679 1.2e-69 2
TIGR_CMR|GSU_1809 - symbol:GSU_1809 "cell division protei... 705 1.4e-69 1
TIGR_CMR|BA_0064 - symbol:BA_0064 "cell division protein ... 692 3.5e-68 1
UNIPROTKB|P0C5C0 - symbol:ftsH "ATP-dependent zinc metall... 677 1.3e-66 1
TIGR_CMR|CPS_3452 - symbol:CPS_3452 "ATP-dependent metall... 677 1.3e-66 1
UNIPROTKB|Q2GIT4 - symbol:ftsH "ATP-dependent zinc metall... 676 1.7e-66 1
TIGR_CMR|APH_1179 - symbol:APH_1179 "ATP-dependent metall... 676 1.7e-66 1
UNIPROTKB|Q55700 - symbol:ftsH2 "ATP-dependent zinc metal... 670 7.4e-66 1
UNIPROTKB|P37476 - symbol:ftsH "ATP-dependent zinc metall... 669 9.4e-66 1
TIGR_CMR|NSE_0423 - symbol:NSE_0423 "ATP-dependent metall... 667 1.5e-65 1
TIGR_CMR|SO_1197 - symbol:SO_1197 "ATP-dependent metallop... 665 2.5e-65 1
TIGR_CMR|CBU_1352 - symbol:CBU_1352 "ATP-dependent metall... 662 5.2e-65 1
UNIPROTKB|Q2GFA1 - symbol:ftsH "ATP-dependent zinc metall... 661 6.7e-65 1
TIGR_CMR|ECH_1098 - symbol:ECH_1098 "ATP-dependent metall... 661 6.7e-65 1
TAIR|locus:2009235 - symbol:FTSH8 "FTSH protease 8" speci... 632 4.8e-64 2
UNIPROTKB|Q9KU86 - symbol:ftsH "ATP-dependent zinc metall... 652 6.0e-64 1
TIGR_CMR|VC_0637 - symbol:VC_0637 "cell division protein ... 652 6.0e-64 1
TAIR|locus:2154568 - symbol:ftsh9 "FTSH protease 9" speci... 627 6.1e-64 2
UNIPROTKB|P0AAI3 - symbol:ftsH species:83333 "Escherichia... 650 9.7e-64 1
TIGR_CMR|DET_0391 - symbol:DET_0391 "ATP-dependent metall... 647 2.0e-63 1
TIGR_CMR|CJE_1259 - symbol:CJE_1259 "cell division protei... 642 6.9e-63 1
TAIR|locus:2052806 - symbol:VAR2 "VARIEGATED 2" species:3... 641 8.8e-63 1
CGD|CAL0004443 - symbol:orf19.2057 species:5476 "Candida ... 596 1.7e-62 3
TIGR_CMR|GSU_1180 - symbol:GSU_1180 "cell division protei... 638 1.8e-62 1
TAIR|locus:2075581 - symbol:ftsh7 "FTSH protease 7" speci... 633 6.2e-62 1
DICTYBASE|DDB_G0284249 - symbol:DDB_G0284249 "peptidase M... 592 2.9e-60 2
TAIR|locus:2057386 - symbol:ftsh4 "FTSH protease 4" speci... 612 1.0e-59 1
POMBASE|SPBC543.09 - symbol:yta12 "mitochondrial m-AAA pr... 606 4.5e-59 1
CGD|CAL0000075 - symbol:AFG3 species:5476 "Candida albica... 494 3.0e-58 3
UNIPROTKB|Q5AJC2 - symbol:AFG3 "Putative uncharacterized ... 494 3.0e-58 3
MGI|MGI:1916847 - symbol:Afg3l2 "AFG3(ATPase family gene ... 598 3.2e-58 1
UNIPROTKB|F1LN92 - symbol:Afg3l2 "Protein Afg3l2" species... 598 3.2e-58 1
TAIR|locus:2163736 - symbol:FTSH11 "FTSH protease 11" spe... 597 4.0e-58 1
UNIPROTKB|E2QYF3 - symbol:AFG3L2 "Uncharacterized protein... 595 6.6e-58 1
UNIPROTKB|Q9Y4W6 - symbol:AFG3L2 "AFG3-like protein 2" sp... 595 6.6e-58 1
ASPGD|ASPL0000072959 - symbol:AN4557 species:162425 "Emer... 598 6.8e-58 1
UNIPROTKB|Q2KJI7 - symbol:AFG3L2 "AFG3-like protein 2" sp... 594 8.4e-58 1
UNIPROTKB|E1BZ74 - symbol:AFG3L2 "Uncharacterized protein... 588 3.6e-57 1
UNIPROTKB|F1N9N5 - symbol:AFG3L2 "Uncharacterized protein... 588 3.6e-57 1
ZFIN|ZDB-GENE-070912-46 - symbol:afg3l2 "AFG3 ATPase fami... 582 1.6e-56 1
TAIR|locus:2025052 - symbol:ftsh10 "FTSH protease 10" spe... 562 2.0e-56 2
DICTYBASE|DDB_G0272120 - symbol:rcaA "peptidase M41, FtsH... 582 2.6e-56 1
RGD|1309722 - symbol:Afg3l1 "AFG3(ATPase family gene 3)-l... 579 3.3e-56 1
MGI|MGI:1928277 - symbol:Afg3l1 "AFG3(ATPase family gene ... 578 4.2e-56 1
TAIR|locus:2066128 - symbol:ftsh3 "FTSH protease 3" speci... 575 8.6e-56 1
SGD|S000004695 - symbol:YTA12 "Component of the mitochond... 576 8.9e-56 1
WB|WBGene00004978 - symbol:spg-7 species:6239 "Caenorhabd... 574 1.1e-55 1
UNIPROTKB|E1BFQ0 - symbol:E1BFQ0 "Uncharacterized protein... 572 1.8e-55 1
TAIR|locus:2076929 - symbol:AT3G02450 species:3702 "Arabi... 551 2.0e-55 2
FB|FBgn0036702 - symbol:CG6512 species:7227 "Drosophila m... 572 2.7e-55 1
UNIPROTKB|I3LLQ8 - symbol:AFG3L2 "Uncharacterized protein... 567 6.1e-55 1
DICTYBASE|DDB_G0267492 - symbol:DDB_G0267492 "peptidase M... 542 2.3e-54 2
POMBASE|SPCC965.04c - symbol:SPCC965.04c "mitochondrial i... 560 3.4e-54 1
SGD|S000000819 - symbol:AFG3 "Component, with Yta12p, of ... 557 7.0e-54 1
GENEDB_PFALCIPARUM|PFL1925w - symbol:PFL1925w "cell divis... 559 1.6e-53 1
UNIPROTKB|Q8I526 - symbol:PFL1925w "Cell division protein... 559 1.6e-53 1
TAIR|locus:2138146 - symbol:FtsHi1 "FTSH inactive proteas... 548 2.0e-53 2
CGD|CAL0002950 - symbol:YME1 species:5476 "Candida albica... 547 8.0e-53 1
ASPGD|ASPL0000029469 - symbol:AN5588 species:162425 "Emer... 547 1.0e-52 1
DICTYBASE|DDB_G0293388 - symbol:DDB_G0293388 "ATP-depende... 543 2.1e-52 1
ZFIN|ZDB-GENE-070410-25 - symbol:yme1l1b "YME1-like 1b" s... 542 2.7e-52 1
WB|WBGene00010842 - symbol:ymel-1 species:6239 "Caenorhab... 541 3.5e-52 1
UNIPROTKB|F1PRV6 - symbol:YME1L1 "Uncharacterized protein... 537 9.2e-52 1
UNIPROTKB|J9NRR9 - symbol:YME1L1 "Uncharacterized protein... 537 9.2e-52 1
UNIPROTKB|F1RVK1 - symbol:YME1L1 "Uncharacterized protein... 537 1.1e-51 1
UNIPROTKB|F1NTK8 - symbol:YME1L1 "Uncharacterized protein... 536 1.2e-51 1
UNIPROTKB|F1P519 - symbol:YME1L1 "Uncharacterized protein... 536 1.2e-51 1
MGI|MGI:1351651 - symbol:Yme1l1 "YME1-like 1 (S. cerevisi... 536 1.2e-51 1
UNIPROTKB|G3V886 - symbol:Yme1l1 "YME1-like 1 (S. cerevis... 536 1.2e-51 1
UNIPROTKB|Q96TA2 - symbol:YME1L1 "ATP-dependent zinc meta... 537 1.2e-51 1
UNIPROTKB|A6QR12 - symbol:YME1L1 "Uncharacterized protein... 535 1.5e-51 1
GENEDB_PFALCIPARUM|PF14_0616 - symbol:PF14_0616 "i-AAA pr... 527 1.1e-50 1
UNIPROTKB|Q8IKI9 - symbol:PF14_0616 "ATP-dependent protea... 527 1.1e-50 1
ZFIN|ZDB-GENE-030131-5391 - symbol:spg7 "spastic parapleg... 526 3.0e-50 1
RGD|620764 - symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" ... 521 4.6e-50 1
ZFIN|ZDB-GENE-091113-41 - symbol:yme1l1a "YME1-like 1a" s... 521 4.6e-50 1
SGD|S000006228 - symbol:YME1 "Catalytic subunit of the mi... 521 5.5e-50 1
UNIPROTKB|F1NXP0 - symbol:SPG7 "Uncharacterized protein" ... 521 8.3e-50 1
UNIPROTKB|A7E2Z6 - symbol:SPG7 "SPG7 protein" species:991... 520 1.3e-49 1
MGI|MGI:2385906 - symbol:Spg7 "spastic paraplegia 7 homol... 517 2.9e-49 1
FB|FBgn0024992 - symbol:CG2658 species:7227 "Drosophila m... 515 7.1e-49 1
UNIPROTKB|E2R4F3 - symbol:SPG7 "Uncharacterized protein" ... 514 7.2e-49 1
UNIPROTKB|Q9UQ90 - symbol:SPG7 "Paraplegin" species:9606 ... 514 7.4e-49 1
UNIPROTKB|Q58576 - symbol:pan "Proteasome-activating nucl... 509 8.5e-49 1
TAIR|locus:2174819 - symbol:EMB3144 "EMBRYO DEFECTIVE 314... 513 1.5e-48 1
TIGR_CMR|CJE_1085 - symbol:CJE_1085 "cell division protei... 502 4.7e-48 1
WB|WBGene00021425 - symbol:ppgn-1 species:6239 "Caenorhab... 481 2.7e-44 1
SGD|S000005785 - symbol:RPT4 "ATPase of the 19S regulator... 437 2.7e-43 2
POMBASE|SPCC1682.16 - symbol:rpt4 "19S proteasome regulat... 458 2.9e-43 1
FB|FBgn0034792 - symbol:CG3499 species:7227 "Drosophila m... 470 9.2e-43 1
ASPGD|ASPL0000032311 - symbol:AN5747 species:162425 "Emer... 441 2.7e-41 1
GENEDB_PFALCIPARUM|PF13_0033 - symbol:PF13_0033 "26S prot... 441 2.7e-41 1
UNIPROTKB|Q8IEQ1 - symbol:PF13_0033 "26S proteasome regul... 441 2.7e-41 1
GENEDB_PFALCIPARUM|PF10_0081 - symbol:PF10_0081 "26S prot... 418 1.7e-40 2
WARNING: Descriptions of 548 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2094892 [details] [associations]
symbol:EMB2083 "embryo defective 2083" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0000023 "maltose metabolic process"
evidence=RCA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AB023046
eggNOG:COG0465 GO:GO:0017111 IPI:IPI00526963 RefSeq:NP_566541.1
UniGene:At.38918 ProteinModelPortal:A8MPR5 SMR:A8MPR5 STRING:A8MPR5
PaxDb:A8MPR5 PRIDE:A8MPR5 EnsemblPlants:AT3G16290.1 GeneID:820876
KEGG:ath:AT3G16290 TAIR:At3g16290 HOGENOM:HOG000015086
InParanoid:A8MPR5 OMA:FFTHGEM PhylomeDB:A8MPR5
ProtClustDB:CLSN2688442 Genevestigator:A8MPR5 Uniprot:A8MPR5
Length = 876
Score = 2061 (730.6 bits), Expect = 7.6e-273, Sum P(2) = 7.6e-273
Identities = 410/512 (80%), Positives = 443/512 (86%)
Query: 283 QKYEESLQDARDNYRYMANVWENLAKDSTVATGLGIVFFVIFYRTVVLNYRRQKKDYEDX 342
+KYEESL++AR NYR MA++W LA+D VAT LG+VFF IFYR VVLNYR+QKKDYED
Sbjct: 275 KKYEESLREARKNYRDMADMWARLAQDPNVATALGLVFFYIFYRVVVLNYRKQKKDYEDR 334
Query: 343 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGEAEQNPHLKMAMQFMKSGARVRRAYG 402
+G E+NP+L+MAMQFMKSGARVRRA
Sbjct: 335 LKIEKAEADERKKMRELEREMEGIEEEDEEVEEGTGEKNPYLQMAMQFMKSGARVRRASN 394
Query: 403 KGLPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXX 462
K LP+YLERGVDVKF+DVAGLGKIRLELEEIVKFFTHGEMYRRRGV+
Sbjct: 395 KRLPEYLERGVDVKFTDVAGLGKIRLELEEIVKFFTHGEMYRRRGVKIPGGILLCGPPGV 454
Query: 463 XKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAV 522
KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVR+LYQEA++NAPSVVFIDELDAV
Sbjct: 455 GKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRALYQEARENAPSVVFIDELDAV 514
Query: 523 GRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRK 582
GRERGLIKGSGGQERDATLNQLLV LDGFEGRG VITIASTNRPDILDPALVRPGRFDRK
Sbjct: 515 GRERGLIKGSGGQERDATLNQLLVSLDGFEGRGEVITIASTNRPDILDPALVRPGRFDRK 574
Query: 583 IFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG 642
IFIPKPGLIGRMEIL+VHARKKPMA+D+DY+AVASMTDGMVGAELANIVE+AAINMMRDG
Sbjct: 575 IFIPKPGLIGRMEILQVHARKKPMAEDLDYMAVASMTDGMVGAELANIVEIAAINMMRDG 634
Query: 643 RTEITTDDLLQAAQIEERGMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIA 702
RTE+TTDDLLQAAQIEERGMLDRK+RS ETWRQVAINEAAMAVVAVNFPD+KNIEF+TI
Sbjct: 635 RTELTTDDLLQAAQIEERGMLDRKDRSLETWRQVAINEAAMAVVAVNFPDMKNIEFLTIN 694
Query: 703 PRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETA 762
PRAGRELGYVR+KMDH+KFKEGMLSRQS+LDHITVQLAPRAADELW GE QLSTIWAET+
Sbjct: 695 PRAGRELGYVRVKMDHIKFKEGMLSRQSILDHITVQLAPRAADELWYGEDQLSTIWAETS 754
Query: 763 DNARSAARTFVLGGLSDKHFGLSNFWVADRIN 794
DNARSAAR+ VLGGLSDKH GL+NFWVADRIN
Sbjct: 755 DNARSAARSLVLGGLSDKHHGLNNFWVADRIN 786
Score = 586 (211.3 bits), Expect = 7.6e-273, Sum P(2) = 7.6e-273
Identities = 120/190 (63%), Positives = 141/190 (74%)
Query: 38 SCKNQNF-NPQNEDRNKNQNSKRPHLGLLTIPVTLTIISTSLAQKPAFAXXXXXXXXXXX 96
SC+N + N +ED + N +K + LL IP+TLTIIS SLA KP+FA
Sbjct: 32 SCQNNSATNVVHEDGDDNDKAKTNQVNLLAIPITLTIISASLA-KPSFAAAKVTERKRTQ 90
Query: 97 XXXXXXEALTPEQLKKWSKDLPIVSDRIAYTEIFSLKDEGKLKHVIKSPSGSLRQKAEPV 156
EALT EQLK WSKDLP+VS+RI YT+I SLK EGKLKHVIK P+ SLRQKAEPV
Sbjct: 91 KKPQ--EALTLEQLKAWSKDLPVVSNRIPYTDILSLKAEGKLKHVIKPPNLSLRQKAEPV 148
Query: 157 LVVLEDSRVLRTVLPSLDSNRKFWESWDELKIDSLCVNAYTPPLKKPEVPNPYLGFLWRV 216
LVVLEDSRVLRTVLPSL+ N++FWE WDEL ID CVNAYTPP+K+P VP+PYLGFLW+V
Sbjct: 149 LVVLEDSRVLRTVLPSLEGNKRFWEQWDELGIDVQCVNAYTPPVKRPPVPSPYLGFLWKV 208
Query: 217 PASMLSTFRP 226
PA ML+ +P
Sbjct: 209 PAYMLTWVKP 218
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 707 (253.9 bits), Expect = 7.6e-72, Sum P(2) = 7.6e-72
Identities = 168/397 (42%), Positives = 233/397 (58%)
Query: 388 MQFMKSGARVRRAYGKGLPQ-YLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRR 446
MQ + G ++GK + + + V F+DVAG+ +++ EL EIV+F + Y
Sbjct: 127 MQQAQGGGNRVMSFGKSRAKLHTDEKKRVTFADVAGIDEVKEELAEIVEFLKNPRKYNEL 186
Query: 447 GVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEA 506
G R KTLLA+A+AGEAGV FFSIS S FVE++VGVGASRVR L+++A
Sbjct: 187 GARIPKGVLLFGQPGTGKTLLARAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQA 246
Query: 507 KDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 566
K NAP +VFIDE+DAVGR+RG G G ER+ TLNQLLV +DGF +I IA+TNRP
Sbjct: 247 KKNAPCIVFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFNSNEGIIIIAATNRP 306
Query: 567 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 626
DILDPAL+RPGRFDR I + P + GR EILKVH + KP+ DDVD +A T G GA+
Sbjct: 307 DILDPALLRPGRFDRHIVVDTPDINGRKEILKVHVKGKPLGDDVDLDVLARRTPGFTGAD 366
Query: 627 LANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMA 684
LAN+V AA+ R + I +++ +A + G ++K + S R VA +EA A
Sbjct: 367 LANMVNEAALLAARRNKKVINMEEMEEAIERVIAGP-EKKSKVISEREKRLVAYHEAGHA 425
Query: 685 VVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAA 744
+V P + ++I PR GR GY + + + +++ LLD IT+ L R A
Sbjct: 426 MVGYLLPHTDPVHKISIIPR-GRAGGYTLLLPEEDR---SYMTKSQLLDEITMLLGGRVA 481
Query: 745 DELWCGEGQLSTIWAETADNARSAARTFVLG-GLSDK 780
+ L + +ST + A AR V+ G+S++
Sbjct: 482 EALVLED--ISTGARNDLERATETARRMVMEYGMSEE 516
Score = 38 (18.4 bits), Expect = 7.6e-72, Sum P(2) = 7.6e-72
Identities = 20/80 (25%), Positives = 37/80 (46%)
Query: 124 IAYTEIFSLKDEGKLKHVIKSPSGSLRQKAEPVLVVLEDSRVLRTVLPSLDSNRKFWESW 183
+ Y E +SL ++G++ V ++ + + VL D +T P D+ E +
Sbjct: 35 LKYDEFYSLLEKGQVASVAIQTDRTINE----ISGVLRDGTRFKTRGPLEDA-----ELY 85
Query: 184 DELKIDSLCVNAYTPPLKKP 203
+LK ++ V PP K+P
Sbjct: 86 KDLKKMNVTVEIM-PP-KEP 103
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 707 (253.9 bits), Expect = 7.6e-72, Sum P(2) = 7.6e-72
Identities = 168/397 (42%), Positives = 233/397 (58%)
Query: 388 MQFMKSGARVRRAYGKGLPQ-YLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRR 446
MQ + G ++GK + + + V F+DVAG+ +++ EL EIV+F + Y
Sbjct: 127 MQQAQGGGNRVMSFGKSRAKLHTDEKKRVTFADVAGIDEVKEELAEIVEFLKNPRKYNEL 186
Query: 447 GVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEA 506
G R KTLLA+A+AGEAGV FFSIS S FVE++VGVGASRVR L+++A
Sbjct: 187 GARIPKGVLLFGQPGTGKTLLARAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQA 246
Query: 507 KDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 566
K NAP +VFIDE+DAVGR+RG G G ER+ TLNQLLV +DGF +I IA+TNRP
Sbjct: 247 KKNAPCIVFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFNSNEGIIIIAATNRP 306
Query: 567 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 626
DILDPAL+RPGRFDR I + P + GR EILKVH + KP+ DDVD +A T G GA+
Sbjct: 307 DILDPALLRPGRFDRHIVVDTPDINGRKEILKVHVKGKPLGDDVDLDVLARRTPGFTGAD 366
Query: 627 LANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMA 684
LAN+V AA+ R + I +++ +A + G ++K + S R VA +EA A
Sbjct: 367 LANMVNEAALLAARRNKKVINMEEMEEAIERVIAGP-EKKSKVISEREKRLVAYHEAGHA 425
Query: 685 VVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAA 744
+V P + ++I PR GR GY + + + +++ LLD IT+ L R A
Sbjct: 426 MVGYLLPHTDPVHKISIIPR-GRAGGYTLLLPEEDR---SYMTKSQLLDEITMLLGGRVA 481
Query: 745 DELWCGEGQLSTIWAETADNARSAARTFVLG-GLSDK 780
+ L + +ST + A AR V+ G+S++
Sbjct: 482 EALVLED--ISTGARNDLERATETARRMVMEYGMSEE 516
Score = 38 (18.4 bits), Expect = 7.6e-72, Sum P(2) = 7.6e-72
Identities = 20/80 (25%), Positives = 37/80 (46%)
Query: 124 IAYTEIFSLKDEGKLKHVIKSPSGSLRQKAEPVLVVLEDSRVLRTVLPSLDSNRKFWESW 183
+ Y E +SL ++G++ V ++ + + VL D +T P D+ E +
Sbjct: 35 LKYDEFYSLLEKGQVASVAIQTDRTINE----ISGVLRDGTRFKTRGPLEDA-----ELY 85
Query: 184 DELKIDSLCVNAYTPPLKKP 203
+LK ++ V PP K+P
Sbjct: 86 KDLKKMNVTVEIM-PP-KEP 103
>UNIPROTKB|Q5LNU8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 692 (248.7 bits), Expect = 2.9e-70, Sum P(2) = 2.9e-70
Identities = 171/402 (42%), Positives = 232/402 (57%)
Query: 388 MQFMKSGARV-RRAYGKGLPQYL-ERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRR 445
M M+ G R +GK + L E+ V F DVAG+ + + ELEEIV+F + + + R
Sbjct: 124 MNRMQGGGRGGAMGFGKSKAKMLTEKHGRVTFDDVAGIDEAKEELEEIVEFLRNPQKFSR 183
Query: 446 RGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQE 505
G + KTLLA+A+AGEAGV FF+IS S FVE++VGVGASRVR ++++
Sbjct: 184 LGGKIPKGALLVGPPGTGKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQ 243
Query: 506 AKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNR 565
AK NAP +VFIDE+DAVGR RG G G ER+ TLNQLLV +DGFE VI +A+TNR
Sbjct: 244 AKKNAPCIVFIDEIDAVGRHRGAGYGGGNDEREQTLNQLLVEMDGFEANEGVIILAATNR 303
Query: 566 PDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGA 625
D+LDPAL+RPGRFDR + + P + GR +IL VHARK P+ DVD +A T G GA
Sbjct: 304 KDVLDPALLRPGRFDRNVTVGNPDIKGREKILGVHARKTPLGPDVDLRIIARGTPGFSGA 363
Query: 626 ELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERS----SETWRQVAINEA 681
+LAN+V AA+ R GR +T +D A +++ M+ + RS + + A +EA
Sbjct: 364 DLANLVNEAALMAARVGRRFVTMEDFENA---KDKVMMGAERRSMVLTQDQKEKTAYHEA 420
Query: 682 AMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRM--KMDHMKFKEGMLSRQSLLDHITVQL 739
AVV + P + TI PR G LG V +MD + + R + + +
Sbjct: 421 GHAVVGLALPMCDPVYKATIIPRGGA-LGMVVSLPEMDRLNWH-----RDECQQKLAMTM 474
Query: 740 APRAADELWCGEGQLSTIWAETADNARSAARTFVLG-GLSDK 780
A +AA+ L GE +S A A AR V+ G+SDK
Sbjct: 475 AGKAAEILKYGEDHVSNGPAGDIQQASQLARAMVMRWGMSDK 516
Score = 38 (18.4 bits), Expect = 2.9e-70, Sum P(2) = 2.9e-70
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 121 SDRIAYTEIFSLKDEGKLKHVI 142
S Y+E S DEG + VI
Sbjct: 35 SQEKTYSEFVSAVDEGNVTKVI 56
>TIGR_CMR|SPO_3105 [details] [associations]
symbol:SPO_3105 "ATP-dependent metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 692 (248.7 bits), Expect = 2.9e-70, Sum P(2) = 2.9e-70
Identities = 171/402 (42%), Positives = 232/402 (57%)
Query: 388 MQFMKSGARV-RRAYGKGLPQYL-ERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRR 445
M M+ G R +GK + L E+ V F DVAG+ + + ELEEIV+F + + + R
Sbjct: 124 MNRMQGGGRGGAMGFGKSKAKMLTEKHGRVTFDDVAGIDEAKEELEEIVEFLRNPQKFSR 183
Query: 446 RGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQE 505
G + KTLLA+A+AGEAGV FF+IS S FVE++VGVGASRVR ++++
Sbjct: 184 LGGKIPKGALLVGPPGTGKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQ 243
Query: 506 AKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNR 565
AK NAP +VFIDE+DAVGR RG G G ER+ TLNQLLV +DGFE VI +A+TNR
Sbjct: 244 AKKNAPCIVFIDEIDAVGRHRGAGYGGGNDEREQTLNQLLVEMDGFEANEGVIILAATNR 303
Query: 566 PDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGA 625
D+LDPAL+RPGRFDR + + P + GR +IL VHARK P+ DVD +A T G GA
Sbjct: 304 KDVLDPALLRPGRFDRNVTVGNPDIKGREKILGVHARKTPLGPDVDLRIIARGTPGFSGA 363
Query: 626 ELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERS----SETWRQVAINEA 681
+LAN+V AA+ R GR +T +D A +++ M+ + RS + + A +EA
Sbjct: 364 DLANLVNEAALMAARVGRRFVTMEDFENA---KDKVMMGAERRSMVLTQDQKEKTAYHEA 420
Query: 682 AMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRM--KMDHMKFKEGMLSRQSLLDHITVQL 739
AVV + P + TI PR G LG V +MD + + R + + +
Sbjct: 421 GHAVVGLALPMCDPVYKATIIPRGGA-LGMVVSLPEMDRLNWH-----RDECQQKLAMTM 474
Query: 740 APRAADELWCGEGQLSTIWAETADNARSAARTFVLG-GLSDK 780
A +AA+ L GE +S A A AR V+ G+SDK
Sbjct: 475 AGKAAEILKYGEDHVSNGPAGDIQQASQLARAMVMRWGMSDK 516
Score = 38 (18.4 bits), Expect = 2.9e-70, Sum P(2) = 2.9e-70
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 121 SDRIAYTEIFSLKDEGKLKHVI 142
S Y+E S DEG + VI
Sbjct: 35 SQEKTYSEFVSAVDEGNVTKVI 56
>TAIR|locus:2157637 [details] [associations]
symbol:VAR1 "VARIEGATED 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA;IDA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=RCA;TAS] [GO:0009579 "thylakoid" evidence=IDA] [GO:0010205
"photoinhibition" evidence=IMP] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0009773 "photosynthetic electron transport in photosystem I"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0007275 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0006508 GO:GO:0009941
GO:GO:0004222 GO:GO:0016887 EMBL:AB023032 GO:GO:0010205
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0009535
HOGENOM:HOG000217276 KO:K03798 ProtClustDB:CLSN2688633
GO:GO:0010304 EMBL:AY126987 IPI:IPI00517420 RefSeq:NP_568604.1
UniGene:At.21670 UniGene:At.66720 ProteinModelPortal:Q9FH02
SMR:Q9FH02 STRING:Q9FH02 MEROPS:M41.024 PaxDb:Q9FH02 PRIDE:Q9FH02
EnsemblPlants:AT5G42270.1 GeneID:834232 KEGG:ath:AT5G42270
GeneFarm:4746 TAIR:At5g42270 InParanoid:Q9FH02 OMA:RARASMP
PhylomeDB:Q9FH02 Genevestigator:Q9FH02 GermOnline:AT5G42270
Uniprot:Q9FH02
Length = 704
Score = 686 (246.5 bits), Expect = 2.9e-70, Sum P(2) = 2.9e-70
Identities = 153/359 (42%), Positives = 217/359 (60%)
Query: 401 YGKGLPQYLE-RGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXX 459
+G+ ++ E V F DVAG + +LEL+E+V F + + Y G +
Sbjct: 232 FGRSKSKFQEVPETGVTFGDVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGP 291
Query: 460 XXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDEL 519
KTLLA+AVAGEAGV FFS +AS+FVE++VGVGASRVR L+++AK AP +VFIDE+
Sbjct: 292 PGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEI 351
Query: 520 DAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRF 579
DAVGR+RG G G ER+ T+NQLL +DGF G VI +A+TNRPD+LD AL+RPGRF
Sbjct: 352 DAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRF 411
Query: 580 DRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMM 639
DR++ + +P + GR++ILKVH+R K + DVDY VA T G GA+L N++ AAI
Sbjct: 412 DRQVTVDRPDVAGRVQILKVHSRGKAIGKDVDYEKVARRTPGFTGADLQNLMNEAAILAA 471
Query: 640 RDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDLKNIE 697
R EI+ D++ A + G ++K S E R VA +EA A+V P+ +
Sbjct: 472 RRELKEISKDEISDALERIIAGP-EKKNAVVSEEKKRLVAYHEAGHALVGALMPEYDPVA 530
Query: 698 FVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLST 756
++I PR G+ G + + G+ SR L + + V L R A+E+ G+ ++T
Sbjct: 531 KISIIPR-GQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTT 588
Score = 44 (20.5 bits), Expect = 2.9e-70, Sum P(2) = 2.9e-70
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 114 SKDLPIVSDRIAYTEIFSLKDEGKLKHVIKSPSGSLRQ 151
S DLP + Y+E + +GK++ V S GS+ Q
Sbjct: 115 SSDLPD-GTQWRYSEFLNAVKKGKVERVKFSKDGSVLQ 151
>TAIR|locus:2011952 [details] [associations]
symbol:FTSH1 "FTSH protease 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0031977
"thylakoid lumen" evidence=IDA] [GO:0010206 "photosystem II repair"
evidence=TAS] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0007275
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 eggNOG:COG0465
TIGRFAMs:TIGR01241 GO:GO:0009535 GO:GO:0031977 GO:GO:0004176
GO:GO:0010206 EMBL:AC007980 EMBL:X99808 EMBL:AY091095 EMBL:AY123034
EMBL:Y12780 IPI:IPI00518805 PIR:G96538 RefSeq:NP_564563.1
UniGene:At.21777 ProteinModelPortal:Q39102 SMR:Q39102 STRING:Q39102
MEROPS:M41.020 PaxDb:Q39102 PRIDE:Q39102 EnsemblPlants:AT1G50250.1
GeneID:841447 KEGG:ath:AT1G50250 GeneFarm:2667 TAIR:At1g50250
HOGENOM:HOG000217276 InParanoid:Q39102 KO:K03798 OMA:GGNPAMN
PhylomeDB:Q39102 ProtClustDB:CLSN2688633 Genevestigator:Q39102
GermOnline:AT1G50250 GO:GO:0010304 Uniprot:Q39102
Length = 716
Score = 679 (244.1 bits), Expect = 1.2e-69, Sum P(2) = 1.2e-69
Identities = 151/359 (42%), Positives = 218/359 (60%)
Query: 401 YGKGLPQYLE-RGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXX 459
+G+ ++ E V F+DVAG + +LEL+E+V F + + Y G +
Sbjct: 244 FGRSKSKFQEVPETGVSFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGP 303
Query: 460 XXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDEL 519
KTLLA+AVAGEAGV FFS +AS+FVE++VGVGASRVR L+++AK AP +VFIDE+
Sbjct: 304 PGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEI 363
Query: 520 DAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRF 579
DAVGR+RG G G ER+ T+NQLL +DGF G VI +A+TNRPD+LD AL+RPGRF
Sbjct: 364 DAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRF 423
Query: 580 DRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMM 639
DR++ + +P + GR++IL+VH+R K + DVD+ VA T G GA+L N++ AAI
Sbjct: 424 DRQVTVDRPDVAGRVKILQVHSRGKALGKDVDFDKVARRTPGFTGADLQNLMNEAAILAA 483
Query: 640 RDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDLKNIE 697
R EI+ D++ A + G ++K S E R VA +EA A+V P+ +
Sbjct: 484 RRELKEISKDEISDALERIIAGP-EKKNAVVSEEKKRLVAYHEAGHALVGALMPEYDPVA 542
Query: 698 FVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLST 756
++I PR G+ G + + G+ SR L + + V L R A+E+ G+ ++T
Sbjct: 543 KISIIPR-GQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTT 600
Score = 45 (20.9 bits), Expect = 1.2e-69, Sum P(2) = 1.2e-69
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 114 SKDLPIVSDRIAYTEIFSLKDEGKLKHVIKSPSGSLRQ 151
S DLP S + Y+E + +GK++ V S GS+ Q
Sbjct: 125 SSDLPEGS-QWRYSEFLNAVKKGKVERVRFSKDGSVVQ 161
>TIGR_CMR|GSU_1809 [details] [associations]
symbol:GSU_1809 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952859.2 GeneID:2688702 KEGG:gsu:GSU1809 PATRIC:22026473
ProtClustDB:CLSK828573 BioCyc:GSUL243231:GH27-1860-MONOMER
Uniprot:Q74C66
Length = 610
Score = 705 (253.2 bits), Expect = 1.4e-69, P = 1.4e-69
Identities = 174/400 (43%), Positives = 236/400 (59%)
Query: 388 MQFMKSGARVRRAYGKGLPQYL-ERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRR 446
M+ M+ G A+GK + L E V F DVAG+ + + ELEEI++F + + +
Sbjct: 122 MRQMQGGGGKAMAFGKSRAKLLTEAQGRVTFEDVAGVDEAKEELEEIIQFLKDPKKFTKL 181
Query: 447 GVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEA 506
G R KTLLA+AVAGEAGV FFSIS S FVE++VGVGASRVR L+ +
Sbjct: 182 GGRIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFVQG 241
Query: 507 KDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 566
K NAP ++FIDE+DAVGR RG G G ER+ TLNQLLV +DGFE VI IA+TNRP
Sbjct: 242 KKNAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFESNEGVILIAATNRP 301
Query: 567 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 626
D+LDPAL+RPGRFDR++ +P+P + GR ILKVH +K P+A DVD +A T G GA+
Sbjct: 302 DVLDPALLRPGRFDRQVVVPQPDVKGREMILKVHTKKTPLASDVDLGVIARGTPGFSGAD 361
Query: 627 LANIVEVAAINMMRDGRTEITTDDLLQAAQ-----IEERGMLDRKERSSETWRQVAINEA 681
L+N+V AA+ R ++ + D A +E R M+ +E T A +EA
Sbjct: 362 LSNVVNEAALLAARKDKSFVEMKDFDDAKDKVLMGVERRSMVISEEEKKNT----AYHEA 417
Query: 682 AMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAP 741
+VA P + V+I PR GR LG V M++ ++ K +++SLL+ I V +
Sbjct: 418 GHTLVAKLIPGTDPVHKVSIIPR-GRALG-VTMQLP-IEDKHSY-NKESLLNRIAVLMGG 473
Query: 742 RAADELWCGEGQLSTIWAETADNARSAARTFVLG-GLSDK 780
RAA+E+ E L+T + A AR V G+S+K
Sbjct: 474 RAAEEIIFNE--LTTGAGNDIERATEIARKMVCEWGMSEK 511
>TIGR_CMR|BA_0064 [details] [associations]
symbol:BA_0064 "cell division protein FtsH" species:198094
"Bacillus anthracis str. Ames" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0051301 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0030163 HOGENOM:HOG000217277 TIGRFAMs:TIGR01241 KO:K03798
ProtClustDB:CLSK886567 HSSP:Q9LCZ4 OMA:QINMEEV RefSeq:NP_842633.1
RefSeq:YP_016667.1 RefSeq:YP_026351.1 ProteinModelPortal:Q81VX5
SMR:Q81VX5 IntAct:Q81VX5 DNASU:1086600
EnsemblBacteria:EBBACT00000009752 EnsemblBacteria:EBBACT00000016661
EnsemblBacteria:EBBACT00000022411 GeneID:1086600 GeneID:2819677
GeneID:2851579 KEGG:ban:BA_0064 KEGG:bar:GBAA_0064 KEGG:bat:BAS0064
BioCyc:BANT260799:GJAJ-73-MONOMER BioCyc:BANT261594:GJ7F-75-MONOMER
Uniprot:Q81VX5
Length = 633
Score = 692 (248.7 bits), Expect = 3.5e-68, P = 3.5e-68
Identities = 169/395 (42%), Positives = 228/395 (57%)
Query: 389 QFMKSGARVRRAYGKGLPQ-YLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRG 447
Q G+RV +GK + Y + V+F DVAG + + EL E+V+F + G
Sbjct: 133 QAQGGGSRVMN-FGKSKAKLYNDEKKKVRFRDVAGADEEKQELVEVVEFLKDPRKFAEVG 191
Query: 448 VRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAK 507
R KTLLA+AVAGEAGV FFSIS S FVE++VGVGASRVR L++ AK
Sbjct: 192 ARIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAK 251
Query: 508 DNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPD 567
NAP ++FIDE+DAVGR+RG G G ER+ TLNQLLV +DGF +I IA+TNRPD
Sbjct: 252 KNAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGANEGIIIIAATNRPD 311
Query: 568 ILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAEL 627
ILDPAL+RPGRFDR+I + +P + GR +LKVHAR KP+ ++++ A+A+ T G GA+L
Sbjct: 312 ILDPALLRPGRFDRQITVDRPDVNGREAVLKVHARNKPLDENINLRAIATRTPGFSGADL 371
Query: 628 ANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQ-VAINEAAMAVV 686
N++ AA+ R + +I D+ +A G + SE R VA +EA V+
Sbjct: 372 ENLLNEAALVAARQDKKKIDMSDIDEATDRVIAGPAKKSRVISEKERNIVAFHEAGHTVI 431
Query: 687 AVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADE 746
V + + VTI PR G+ GY M ++ +++ LLD IT L R A+E
Sbjct: 432 GVVLDEADVVHKVTIVPR-GQAGGYAVMLPKEDRY---FMTKPELLDKITGLLGGRVAEE 487
Query: 747 LWCGEGQLSTIWAETADNARSAARTFVLG-GLSDK 780
+ GE +ST A AR V G+SDK
Sbjct: 488 IVFGE--VSTGAHNDFQRATGIARRMVTEFGMSDK 520
>UNIPROTKB|P0C5C0 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:1773 "Mycobacterium tuberculosis" [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP;IDA] [GO:0006979 "response
to oxidative stress" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0040007
"growth" evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0040007 GO:GO:0006979 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0046872
EMBL:BX842583 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0010468
HOGENOM:HOG000217276 KO:K03798 PIR:C70956 RefSeq:NP_218127.1
RefSeq:NP_338259.1 RefSeq:YP_006517099.1 ProteinModelPortal:P0C5C0
SMR:P0C5C0 PRIDE:P0C5C0 EnsemblBacteria:EBMYCT00000001212
EnsemblBacteria:EBMYCT00000069111 GeneID:13317218 GeneID:885732
GeneID:926520 KEGG:mtc:MT3714 KEGG:mtu:Rv3610c KEGG:mtv:RVBD_3610c
PATRIC:18129921 TubercuList:Rv3610c OMA:RSEMIAR
ProtClustDB:CLSK792593 Uniprot:P0C5C0
Length = 760
Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
Identities = 167/394 (42%), Positives = 229/394 (58%)
Query: 391 MKSGARVRRAYGKGLPQYLERGVD-VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVR 449
M+ GAR+ +GK + L + + F+DVAG+ + EL EI F + Y+ G +
Sbjct: 135 MQGGARMGFGFGKSRAKQLSKDMPKTTFADVAGVDEAVEELYEIKDFLQNPSRYQALGAK 194
Query: 450 XXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDN 509
KTLLA+AVAGEAGV FF+IS S FVE++VGVGASRVR L+++AK N
Sbjct: 195 IPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQN 254
Query: 510 APSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDIL 569
+P ++F+DE+DAVGR+RG G G ER+ TLNQLLV +DGF R VI IA+TNRPDIL
Sbjct: 255 SPCIIFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDIL 314
Query: 570 DPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELAN 629
DPAL+RPGRFDR+I + P L GR +L+VH++ KPMA D D +A T GM GA+LAN
Sbjct: 315 DPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADLAN 374
Query: 630 IVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERS-SETWRQV-AINEAAMAVVA 687
++ AA+ R+ T IT L +A G RK R SE +++ A +E + A
Sbjct: 375 VINEAALLTARENGTVITGPALEEAVD-RVIGGPRRKGRIISEQEKKITAYHEGGHTLAA 433
Query: 688 VNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADEL 747
PD++ I VTI R GR G+ + K G+ +R ++ + + RAA+EL
Sbjct: 434 WAMPDIEPIYKVTILAR-GRTGGHAVAVPEEDK---GLRTRSEMIAQLVFAMGGRAAEEL 489
Query: 748 WCGEGQLSTIWAETADNARSAARTFVLG-GLSDK 780
E + + A AR+ V G+S K
Sbjct: 490 VFREPTTGAV--SDIEQATKIARSMVTEFGMSSK 521
>TIGR_CMR|CPS_3452 [details] [associations]
symbol:CPS_3452 "ATP-dependent metalloprotease FtsH"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 OMA:RSIIDQC
RefSeq:YP_270126.1 ProteinModelPortal:Q47YJ4 SMR:Q47YJ4
STRING:Q47YJ4 GeneID:3519317 KEGG:cps:CPS_3452 PATRIC:21469851
BioCyc:CPSY167879:GI48-3480-MONOMER Uniprot:Q47YJ4
Length = 660
Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
Identities = 162/398 (40%), Positives = 235/398 (59%)
Query: 389 QFMKSGARVRRAYGKGLPQYL-ERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRG 447
Q G + ++GK + L E + F+DVAG + + ++ E+V + +++ G
Sbjct: 124 QMQGGGGKGAMSFGKSKARQLSEEQIKTTFADVAGCDEAKEDVAELVDYLREPSRFQKLG 183
Query: 448 VRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAK 507
R KTLLAKA+AGEA V FF+IS S FVE++VGVGASRVR ++++AK
Sbjct: 184 GRIPSGILLVGQPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAK 243
Query: 508 DNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPD 567
AP ++FIDE+DAVGR+RG G G ER+ TLNQ+LV +DGFEG VI IA+TNRPD
Sbjct: 244 KAAPCIIFIDEIDAVGRQRGAGMGGGHDEREQTLNQMLVEMDGFEGNEGVIVIAATNRPD 303
Query: 568 ILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAEL 627
+LDPAL+RPGRFDR++ + P + GR +ILKVH RK P+ DDV +A T G GA+L
Sbjct: 304 VLDPALLRPGRFDRQVTVGLPDIRGREQILKVHMRKVPLGDDVKAEVIARGTPGFSGADL 363
Query: 628 ANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERS---SETWRQV-AINEAAM 683
AN+V AA+ R R ++ + AA+ ++ M+ + +S SE+ R++ A +EA
Sbjct: 364 ANLVNEAALCAARTARRVVSMKEF-DAAK--DKIMMGSERKSMVMSESEREMTAYHEAGH 420
Query: 684 AVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRA 743
A++ PD + V+I PR GR LG + +F S+Q L +I+ R
Sbjct: 421 AIIGRLVPDHDPVYKVSIIPR-GRALGVTMYLPEQDRFSH---SKQHLESNISSLYGGRV 476
Query: 744 ADELWCGEGQLSTIWAETADNARSAARTFVLG-GLSDK 780
A+E+ G ++ST + + A + AR V GLS+K
Sbjct: 477 AEEVIYGSDKVSTGASNDIERATNIARKMVTQWGLSEK 514
>UNIPROTKB|Q2GIT4 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 676 (243.0 bits), Expect = 1.7e-66, P = 1.7e-66
Identities = 164/394 (41%), Positives = 228/394 (57%)
Query: 391 MKSGARVRRAYGKGLPQYL--ERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGV 448
M+ G + K + + RG V F DVAG+ + + EL EIV F H + + + G
Sbjct: 130 MQLGGNRTMGFSKSRARLMTDSRG-KVTFDDVAGIEEAKEELIEIVDFLKHRQKFTKLGG 188
Query: 449 RXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKD 508
+ KTLLA+A+AGEA V FFSIS S FVE++VGVGASRVR ++++ K
Sbjct: 189 KIPKGCLLIGSPGTGKTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKK 248
Query: 509 NAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDI 568
+AP ++F+DE+DAVGR RG+ G G ER+ TLNQLLV +DGFE V+ IA+TNRPD+
Sbjct: 249 HAPCIIFVDEIDAVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESNEGVVIIAATNRPDV 308
Query: 569 LDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELA 628
LDPAL+RPGRFDR++ I P + GR +I+ VHA+K P+A DVD +A T G GA+LA
Sbjct: 309 LDPALLRPGRFDRQVTISIPDINGREKIIAVHAKKVPLAPDVDLRVIARGTPGFSGADLA 368
Query: 629 NIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVV 686
N+V AA+ R + +T D A G +RK E R A +EA AVV
Sbjct: 369 NLVNEAALIAARLDKKIVTMCDFEYARDKVMMGA-ERKSMVMREEERRLTAYHEAGHAVV 427
Query: 687 AVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADE 746
A + P I TI PR GR LG V + + +R+ +L +TV + RAA+E
Sbjct: 428 AFHNPASDPIHKATIIPR-GRSLGLVMRLPETDRVSH---TREKMLADLTVAMGGRAAEE 483
Query: 747 LWCGEGQLSTIWAETADNARSAARTFVLG-GLSD 779
L G ++++ + A A++ V+ G+SD
Sbjct: 484 LIFGYNKVTSGASSDIKQATDLAKSMVMKWGMSD 517
>TIGR_CMR|APH_1179 [details] [associations]
symbol:APH_1179 "ATP-dependent metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0000910 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 676 (243.0 bits), Expect = 1.7e-66, P = 1.7e-66
Identities = 164/394 (41%), Positives = 228/394 (57%)
Query: 391 MKSGARVRRAYGKGLPQYL--ERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGV 448
M+ G + K + + RG V F DVAG+ + + EL EIV F H + + + G
Sbjct: 130 MQLGGNRTMGFSKSRARLMTDSRG-KVTFDDVAGIEEAKEELIEIVDFLKHRQKFTKLGG 188
Query: 449 RXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKD 508
+ KTLLA+A+AGEA V FFSIS S FVE++VGVGASRVR ++++ K
Sbjct: 189 KIPKGCLLIGSPGTGKTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKK 248
Query: 509 NAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDI 568
+AP ++F+DE+DAVGR RG+ G G ER+ TLNQLLV +DGFE V+ IA+TNRPD+
Sbjct: 249 HAPCIIFVDEIDAVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESNEGVVIIAATNRPDV 308
Query: 569 LDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELA 628
LDPAL+RPGRFDR++ I P + GR +I+ VHA+K P+A DVD +A T G GA+LA
Sbjct: 309 LDPALLRPGRFDRQVTISIPDINGREKIIAVHAKKVPLAPDVDLRVIARGTPGFSGADLA 368
Query: 629 NIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVV 686
N+V AA+ R + +T D A G +RK E R A +EA AVV
Sbjct: 369 NLVNEAALIAARLDKKIVTMCDFEYARDKVMMGA-ERKSMVMREEERRLTAYHEAGHAVV 427
Query: 687 AVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADE 746
A + P I TI PR GR LG V + + +R+ +L +TV + RAA+E
Sbjct: 428 AFHNPASDPIHKATIIPR-GRSLGLVMRLPETDRVSH---TREKMLADLTVAMGGRAAEE 483
Query: 747 LWCGEGQLSTIWAETADNARSAARTFVLG-GLSD 779
L G ++++ + A A++ V+ G+SD
Sbjct: 484 LIFGYNKVTSGASSDIKQATDLAKSMVMKWGMSD 517
>UNIPROTKB|Q55700 [details] [associations]
symbol:ftsH2 "ATP-dependent zinc metalloprotease FtsH 2"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0010206 "photosystem II repair" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009523 "photosystem II" evidence=IDA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0042651 GO:GO:0010206
HOGENOM:HOG000217276 KO:K03798 PIR:S76378 RefSeq:NP_442160.1
RefSeq:YP_005652219.1 ProteinModelPortal:Q55700 SMR:Q55700
IntAct:Q55700 STRING:Q55700 MEROPS:M41.017 GeneID:12253438
GeneID:952628 KEGG:syn:slr0228 KEGG:syy:SYNGTS_2266 PATRIC:23841938
OMA:NTASTRM Uniprot:Q55700
Length = 627
Score = 670 (240.9 bits), Expect = 7.4e-66, P = 7.4e-66
Identities = 158/397 (39%), Positives = 226/397 (56%)
Query: 391 MKSGARVRRAYGKGLPQY-LERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVR 449
M G +GK ++ ++ V F DVAG+ + + EL+E+V F E + G +
Sbjct: 144 MPGGPGQAMNFGKSKARFQMDAKTGVMFDDVAGIDEAKEELQEVVTFLKQPERFTAVGAK 203
Query: 450 XXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDN 509
KTLLAKA+AGEAGV FFSIS S+FVE++VGVGASRVR L+++AK+N
Sbjct: 204 IPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKEN 263
Query: 510 APSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDIL 569
AP ++FIDE+DAVGR+RG G G ER+ TLNQLL +DGFEG +I IA+TNRPD+L
Sbjct: 264 APCLIFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVL 323
Query: 570 DPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELAN 629
D AL+RPGRFDR++ + P GR EIL+VHAR K +A +V ++A T G GA+LAN
Sbjct: 324 DSALMRPGRFDRQVMVDAPDYSGRKEILEVHARNKKLAPEVSIDSIARRTPGFSGADLAN 383
Query: 630 IVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQVAINEAAMAVVAVN 689
++ AAI R ++ IT ++ A GM S++ R +A +E A+V
Sbjct: 384 LLNEAAILTARRRKSAITLLEIDDAVDRVVAGMEGTPLVDSKSKRLIAYHEVGHAIVGTL 443
Query: 690 FPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWC 749
D ++ VT+ PR G+ G + ++G+ ++ L+ I + RAA+E
Sbjct: 444 LKDHDPVQKVTLIPR-GQAQGLTWFTPNE---EQGLTTKAQLMARIAGAMGGRAAEEEVF 499
Query: 750 GEGQLSTIWAETADNARSAARTFVLGGLSDKHFGLSN 786
G+ +++T AR V FG+SN
Sbjct: 500 GDDEVTTGAGGDLQQVTEMARQMVT------RFGMSN 530
>UNIPROTKB|P37476 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0008233 "peptidase activity" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IDA] [GO:0030428 "cell septum"
evidence=IDA] [GO:0043934 "sporulation" evidence=IMP]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0006950 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0007049
GO:GO:0030163 EMBL:AL009126 GenomeReviews:AL009126_GR GO:GO:0043934
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0008233
GO:GO:0030428 EMBL:D26185 HOGENOM:HOG000217276 KO:K03798 PIR:E69627
RefSeq:NP_387950.1 ProteinModelPortal:P37476 SMR:P37476
IntAct:P37476 MEROPS:M41.009 EnsemblBacteria:EBBACT00000001428
GeneID:938094 KEGG:bsu:BSU00690 PATRIC:18971613 GenoList:BSU00690
OMA:ENMSYST ProtClustDB:CLSK886567 BioCyc:BSUB:BSU00690-MONOMER
Uniprot:P37476
Length = 637
Score = 669 (240.6 bits), Expect = 9.4e-66, P = 9.4e-66
Identities = 166/395 (42%), Positives = 224/395 (56%)
Query: 389 QFMKSGARVRRAYGKGLPQ-YLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRG 447
Q G+RV +GK + Y E VKF DVAG + + EL E+V+F + G
Sbjct: 132 QAQGGGSRVMN-FGKSKAKLYTEEKKRVKFKDVAGADEEKQELVEVVEFLKDPRKFAELG 190
Query: 448 VRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAK 507
R KTLLAKA AGEAGV FFSIS S FVE++VGVGASRVR L++ AK
Sbjct: 191 ARIPKGVLLVGPPGTGKTLLAKACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAK 250
Query: 508 DNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPD 567
NAP ++FIDE+DAVGR+RG G G ER+ TLNQLLV +DGF +I IA+TNR D
Sbjct: 251 KNAPCLIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRAD 310
Query: 568 ILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAEL 627
ILDPAL+RPGRFDR+I + +P +IGR +LKVHAR KP+ + V+ ++A T G GA+L
Sbjct: 311 ILDPALLRPGRFDRQITVDRPDVIGREAVLKVHARNKPLDETVNLKSIAMRTPGFSGADL 370
Query: 628 ANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQ-VAINEAAMAVV 686
N++ AA+ R + +I D+ +A G + S+ R VA +E V+
Sbjct: 371 ENLLNEAALVAARQNKKKIDARDIDEATDRVIAGPAKKSRVISKKERNIVAYHEGGHTVI 430
Query: 687 AVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADE 746
+ + + VTI PR G+ GY M ++ + ++ LLD I L R A+E
Sbjct: 431 GLVLDEADMVHKVTIVPR-GQAGGYAVMLPREDRYFQ---TKPELLDKIVGLLGGRVAEE 486
Query: 747 LWCGEGQLSTIWAETADNARSAARTFVLG-GLSDK 780
+ GE +ST A + AR V G+S+K
Sbjct: 487 IIFGE--VSTGAHNDFQRATNIARRMVTEFGMSEK 519
>TIGR_CMR|NSE_0423 [details] [associations]
symbol:NSE_0423 "ATP-dependent metalloprotease FtsH"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 EMBL:CP000237 GenomeReviews:CP000237_GR
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001 RefSeq:YP_506309.1
ProteinModelPortal:Q2GDY7 SMR:Q2GDY7 STRING:Q2GDY7 GeneID:3931660
KEGG:nse:NSE_0423 PATRIC:22680905 OMA:ENIESLH
ProtClustDB:CLSK749654 BioCyc:NSEN222891:GHFU-445-MONOMER
Uniprot:Q2GDY7
Length = 636
Score = 667 (239.9 bits), Expect = 1.5e-65, P = 1.5e-65
Identities = 162/397 (40%), Positives = 229/397 (57%)
Query: 388 MQFMKSGARVRRAYGKGLPQYL-ERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRR 446
M+ M++G +GK + L +R V F DVAG+ + + EL EIV+F + +++
Sbjct: 126 MKQMQAGGNKTMTFGKSKARLLSDRSNKVTFHDVAGIDEAKEELAEIVEFLREPKKFQKL 185
Query: 447 GVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEA 506
G + KTLLAKA+AGEA V FFSIS S FVE++VGVGASRVR ++++
Sbjct: 186 GGKIPKGCLLIGPPGTGKTLLAKAIAGEAKVPFFSISGSDFVEMFVGVGASRVRDMFEQG 245
Query: 507 KDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 566
K NAP ++FIDE+DAVGR RG+ G G ER+ TLNQLLV +DGFE VI IA+TNRP
Sbjct: 246 KKNAPCLIFIDEIDAVGRHRGVGFGGGNDEREQTLNQLLVEMDGFEANEGVIIIAATNRP 305
Query: 567 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 626
D+LDPAL+RPGRFDR+I I P + GR +IL+VH +K P A +V+ +A T G GA+
Sbjct: 306 DVLDPALLRPGRFDRQITISIPDIAGRQKILEVHLKKIPTAPNVEVSIIARGTPGFSGAD 365
Query: 627 LANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKE--RSSETWRQVAINEAAMA 684
LAN+V +A+ R + +T +D A GM +RK E A +EA A
Sbjct: 366 LANLVNESALIAARRNKKVVTNEDFEYARDKILMGM-ERKSLVMREEEKLLTAYHEAGHA 424
Query: 685 VVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAA 744
+ ++ I TI PR GR LG V +H + +R + + V + RAA
Sbjct: 425 ITSLKLEASDPIHKATIIPR-GRALGLVMRLPEHDRVS---FTRAKMHADLIVAMGGRAA 480
Query: 745 DELWCGEGQLSTIWAETADNARSAARTFVLG-GLSDK 780
+++ G+ + ++ A A AR+ V G+S+K
Sbjct: 481 EQVIFGDDKTTSGAASDIKQATHLARSMVTKWGMSEK 517
>TIGR_CMR|SO_1197 [details] [associations]
symbol:SO_1197 "ATP-dependent metalloprotease FtsH"
species:211586 "Shewanella oneidensis MR-1" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051301 "cell division" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006200
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
OMA:RSIIDQC RefSeq:NP_716822.2 ProteinModelPortal:Q8EHM2 SMR:Q8EHM2
GeneID:1169025 KEGG:son:SO_1197 PATRIC:23522048
ProtClustDB:CLSK906146 Uniprot:Q8EHM2
Length = 652
Score = 665 (239.2 bits), Expect = 2.5e-65, P = 2.5e-65
Identities = 160/398 (40%), Positives = 234/398 (58%)
Query: 389 QFMKSGARVRRAYGKGLPQYL-ERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRG 447
Q G + ++GK + + E + F+DVAG + + E++E+V + +++ G
Sbjct: 127 QMQGGGGKGAMSFGKSKAKLMSEDQIKTTFADVAGCDEAKEEVKELVDYLRDPTKFQKLG 186
Query: 448 VRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAK 507
R KTLLAKA+AGE+ V FF+IS S FVE++VGVGASRVR ++++AK
Sbjct: 187 GRIPTGVLMVGPPGTGKTLLAKAIAGESKVPFFTISGSDFVEMFVGVGASRVRDMFEQAK 246
Query: 508 DNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPD 567
+AP ++FIDE+DAVGR+RG G G ER+ TLNQ+LV +DGFEG +I IA+TNRPD
Sbjct: 247 KSAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPD 306
Query: 568 ILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAEL 627
+LD AL+RPGRFDR++ + P + GR +ILKVH RK P+++DV +A T G GA+L
Sbjct: 307 VLDSALLRPGRFDRQVVVGLPDVRGREQILKVHMRKVPLSEDVKASVIARGTPGFSGADL 366
Query: 628 ANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERS---SETWRQV-AINEAAM 683
AN+V AA+ R R + ++ +A +++ M+ + RS SE +++ A +EA
Sbjct: 367 ANLVNEAALFAARGNRRVVGMEEFERA---KDKIMMGAERRSMVMSEAEKEMTAYHEAGH 423
Query: 684 AVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRA 743
A+V P+ + VTI PR GR LG + + SR+ L I+V R
Sbjct: 424 AIVGCLVPEHDPVHKVTIIPR-GRALGVTFFLPEADAISQ---SRRKLESQISVAYGGRL 479
Query: 744 ADELWCGEGQLSTIWAETADNARSAARTFVLG-GLSDK 780
A+EL G ++ST ++ A S AR V G SDK
Sbjct: 480 AEELIYGTEKVSTGASQDIKYATSIARNMVTQWGFSDK 517
>TIGR_CMR|CBU_1352 [details] [associations]
symbol:CBU_1352 "ATP-dependent metalloprotease FtsH"
species:227377 "Coxiella burnetii RSA 493" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HSSP:P28691 HOGENOM:HOG000217276 KO:K03798
MEROPS:M41.001 OMA:RSIIDQC RefSeq:NP_820341.1
ProteinModelPortal:Q83BY5 SMR:Q83BY5 PRIDE:Q83BY5 GeneID:1209258
KEGG:cbu:CBU_1352 PATRIC:17931447 ProtClustDB:CLSK914722
BioCyc:CBUR227377:GJ7S-1342-MONOMER Uniprot:Q83BY5
Length = 647
Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
Identities = 160/401 (39%), Positives = 238/401 (59%)
Query: 388 MQFMKSGARVR--RAYGKGLPQYLERG-VDVKFSDVAGLGKIRLELEEIVKFFTHGEMYR 444
M+ M+ G R ++G+ + L + V V F DVAG+ + + E++E+V+F ++
Sbjct: 123 MRQMQGGGRGGGPMSFGRSKARLLSQDQVKVTFDDVAGVDEAKEEVKELVEFLRDPGKFQ 182
Query: 445 RRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQ 504
R G + KTLLAKAVAGEA V FF+IS S FVE++VGVGASRVR ++
Sbjct: 183 RLGGKMPCGVLLVGPPGTGKTLLAKAVAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFD 242
Query: 505 EAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTN 564
+AK AP ++FIDE+DAVGR RG G G ER+ TLNQLLV +DGFEG+ +I +A+TN
Sbjct: 243 QAKKQAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFEGKEGIIVMAATN 302
Query: 565 RPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVG 624
RPD+LDPAL+RPGRFDR++ +P P + GR ILKVH K P+A DV +A T G G
Sbjct: 303 RPDVLDPALLRPGRFDRQVVVPLPDIKGREYILKVHMNKLPLAKDVKASVIARGTPGFSG 362
Query: 625 AELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERS---SETWRQV-AINE 680
A+LANIV AA+ R+ + +++ + +A +++ M+ + RS S+ +++ A +E
Sbjct: 363 ADLANIVNEAALFAARENKKDVSMSEFERA---KDKIMMGAERRSMVMSDDEKKLTAYHE 419
Query: 681 AAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLA 740
A A+V ++ + + VTI PR GR LG +H ++ ++++ L +
Sbjct: 420 AGHAIVGLHMLEHDPVYKVTIIPR-GRALGVTMFLPEHDRYS---MTKRRLECQLAGLFG 475
Query: 741 PRAADELWCGEGQLSTIWAETADNARSAARTFVLG-GLSDK 780
R A+E+ G ++T + + A AR V GLS K
Sbjct: 476 GRIAEEIIFGPDLVTTGASNDIEKATEIARNMVTKWGLSQK 516
>UNIPROTKB|Q2GFA1 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST
MEROPS:M41.001 ProtClustDB:CLSK749654 RefSeq:YP_507882.1
ProteinModelPortal:Q2GFA1 SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708
KEGG:ech:ECH_1098 PATRIC:20577534
BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 661 (237.7 bits), Expect = 6.7e-65, P = 6.7e-65
Identities = 157/370 (42%), Positives = 220/370 (59%)
Query: 415 VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGE 474
V F+DVAG+ + + EL EIV F H + +++ G + KTLLA+A+AGE
Sbjct: 153 VTFNDVAGIDEAKEELIEIVDFLKHRQRFQKLGGKIPKGCLLIGSPGTGKTLLARAIAGE 212
Query: 475 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 534
A V FFSIS S FVE++VGVGASRVR ++++ K NAP ++FIDE+DAVGR RG+ G G
Sbjct: 213 ANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFIDEIDAVGRHRGIGLGGGN 272
Query: 535 QERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRM 594
ER+ TLNQLLV +DGFE VI IA+TNRPD+LD AL+RPGRFDR++ I P + GR
Sbjct: 273 DEREQTLNQLLVEMDGFESNEGVIIIAATNRPDVLDSALLRPGRFDRQVTISIPDINGRE 332
Query: 595 EILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 654
+I+ VH +K P A DV+ +A T G GA+LAN+V AA+ R + +T D A
Sbjct: 333 KIINVHIKKVPTAPDVNIRTIARGTPGFSGADLANLVNEAALIAARLNKKIVTMSDFEYA 392
Query: 655 AQIEERGMLDRKE--RSSETWRQVAINEAAMAVVAVNFPDLKN-IEFVTIAPRAGRELGY 711
G +RK + E R A +EA A++A F + + I TI PR GR LG
Sbjct: 393 RDKVMMGA-ERKSLMMTEEERRLTAYHEAGHAIIAF-FTEASDPIHKATIIPR-GRSLGL 449
Query: 712 VRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAART 771
V + + +R+ ++ +TV + RAA+EL G ++++ + A A+
Sbjct: 450 VMRLPESDRVSH---TREKMIADLTVAMGGRAAEELIFGYHKVTSGASSDIKQATDLAKA 506
Query: 772 FVLG-GLSDK 780
V+ G+SDK
Sbjct: 507 MVMKWGMSDK 516
>TIGR_CMR|ECH_1098 [details] [associations]
symbol:ECH_1098 "ATP-dependent metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 GO:GO:0000910
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_507882.1 ProteinModelPortal:Q2GFA1
SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708 KEGG:ech:ECH_1098
PATRIC:20577534 BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 661 (237.7 bits), Expect = 6.7e-65, P = 6.7e-65
Identities = 157/370 (42%), Positives = 220/370 (59%)
Query: 415 VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGE 474
V F+DVAG+ + + EL EIV F H + +++ G + KTLLA+A+AGE
Sbjct: 153 VTFNDVAGIDEAKEELIEIVDFLKHRQRFQKLGGKIPKGCLLIGSPGTGKTLLARAIAGE 212
Query: 475 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 534
A V FFSIS S FVE++VGVGASRVR ++++ K NAP ++FIDE+DAVGR RG+ G G
Sbjct: 213 ANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFIDEIDAVGRHRGIGLGGGN 272
Query: 535 QERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRM 594
ER+ TLNQLLV +DGFE VI IA+TNRPD+LD AL+RPGRFDR++ I P + GR
Sbjct: 273 DEREQTLNQLLVEMDGFESNEGVIIIAATNRPDVLDSALLRPGRFDRQVTISIPDINGRE 332
Query: 595 EILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 654
+I+ VH +K P A DV+ +A T G GA+LAN+V AA+ R + +T D A
Sbjct: 333 KIINVHIKKVPTAPDVNIRTIARGTPGFSGADLANLVNEAALIAARLNKKIVTMSDFEYA 392
Query: 655 AQIEERGMLDRKE--RSSETWRQVAINEAAMAVVAVNFPDLKN-IEFVTIAPRAGRELGY 711
G +RK + E R A +EA A++A F + + I TI PR GR LG
Sbjct: 393 RDKVMMGA-ERKSLMMTEEERRLTAYHEAGHAIIAF-FTEASDPIHKATIIPR-GRSLGL 449
Query: 712 VRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAART 771
V + + +R+ ++ +TV + RAA+EL G ++++ + A A+
Sbjct: 450 VMRLPESDRVSH---TREKMIADLTVAMGGRAAEELIFGYHKVTSGASSDIKQATDLAKA 506
Query: 772 FVLG-GLSDK 780
V+ G+SDK
Sbjct: 507 MVMKWGMSDK 516
>TAIR|locus:2009235 [details] [associations]
symbol:FTSH8 "FTSH protease 8" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA;IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=TAS] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AC007592
eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798 GO:GO:0010304
ProtClustDB:CLSN2679937 EMBL:AF419565 EMBL:BT002649 EMBL:BT003813
EMBL:AY045951 IPI:IPI00539195 RefSeq:NP_563766.3 UniGene:At.17054
ProteinModelPortal:Q8W585 SMR:Q8W585 STRING:Q8W585 MEROPS:M41.025
PaxDb:Q8W585 PRIDE:Q8W585 ProMEX:Q8W585 EnsemblPlants:AT1G06430.1
GeneID:837154 KEGG:ath:AT1G06430 GeneFarm:2474 TAIR:At1g06430
InParanoid:Q8W585 OMA:NANADEQ PhylomeDB:Q8W585
Genevestigator:Q8W585 Uniprot:Q8W585
Length = 685
Score = 632 (227.5 bits), Expect = 4.8e-64, Sum P(2) = 4.8e-64
Identities = 152/354 (42%), Positives = 207/354 (58%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLA 468
+E V F DVAG+ + + + E+V+F E + G R KTLLA
Sbjct: 211 MEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLA 270
Query: 469 KAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGL 528
KA+AGEAGV FFSIS S+FVE++VGVGASRVR L+++AK+NAP +VF+DE+DAVGR+RG
Sbjct: 271 KAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGT 330
Query: 529 IKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKP 588
G G ER+ TLNQLL +DGFEG VI +A+TNR DILD AL+RPGRFDR++ + P
Sbjct: 331 GIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVP 390
Query: 589 GLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITT 648
+ GR +ILKVH+ K V +A T G GA+LAN++ AAI R G+T I++
Sbjct: 391 DVKGRTDILKVHSGNKKFESGVSLEVIAMRTPGFSGADLANLLNEAAILAGRRGKTAISS 450
Query: 649 ---DDLLQ--AAQIEERGMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAP 703
DD + A +E M D K +S VA +E A+ P ++ VT+ P
Sbjct: 451 KEIDDSIDRIVAGMEGTVMTDGKSKSL-----VAYHEVGHAICGTLTPGHDAVQKVTLIP 505
Query: 704 RA-GRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLST 756
R R L + D ++S+Q L I L RAA+E+ GE +++T
Sbjct: 506 RGQARGLTWFIPSDDPT-----LISKQQLFARIVGGLGGRAAEEVIFGESEVTT 554
Score = 39 (18.8 bits), Expect = 4.8e-64, Sum P(2) = 4.8e-64
Identities = 7/31 (22%), Positives = 18/31 (58%)
Query: 119 IVSDRIAYTEIFSLKDEGKLKHVIKSPSGSL 149
+ S R++Y+ D+G+++ V +G++
Sbjct: 80 VSSSRMSYSRFLEYLDKGRVEKVDLYENGTI 110
>UNIPROTKB|Q9KU86 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241 HSSP:P28691
KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299 RefSeq:NP_230286.1
ProteinModelPortal:Q9KU86 SMR:Q9KU86 DNASU:2615425 GeneID:2615425
KEGG:vch:VC0637 PATRIC:20080383 ProtClustDB:CLSK874054
Uniprot:Q9KU86
Length = 651
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 159/398 (39%), Positives = 236/398 (59%)
Query: 389 QFMKSGARVRRAYGKGLPQYL-ERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRG 447
Q G + ++GK + + E + FSDVAG + + +++E+V + +++ G
Sbjct: 126 QMQGGGGKGAMSFGKSKARMMSEDQIKTTFSDVAGCDEAKEDVKELVDYLRDPSRFQKLG 185
Query: 448 VRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAK 507
+ KTLLAKA+AGEA V FF+IS S FVE++VGVGASRVR ++++AK
Sbjct: 186 GKIPTGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAK 245
Query: 508 DNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPD 567
+P ++FIDE+DAVGR+RG G G ER+ TLNQ+LV +DGFEG +I IA+TNRPD
Sbjct: 246 KASPCIIFIDEIDAVGRQRGAGVGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPD 305
Query: 568 ILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAEL 627
+LDPAL+RPGRFDR++ + P + GR +ILKVH RK P+A+DV+ +A T G GA+L
Sbjct: 306 VLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRKVPLANDVEPSLIARGTPGFSGADL 365
Query: 628 ANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERS---SETWRQ-VAINEAAM 683
AN+V AA+ R + ++ +++ +++ M+ + RS SE ++ A +EA
Sbjct: 366 ANLVNEAALFAARGNKRNVS---MVEFELAKDKIMMGAERRSMVMSEEIKESTAYHEAGH 422
Query: 684 AVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRA 743
AVV P+ + V+I PR GR LG V M + + M S+Q L I+ R
Sbjct: 423 AVVGRLVPEHDPVYKVSIIPR-GRALG-VTMYLPEQD-RVSM-SKQHLESMISSLYGGRL 478
Query: 744 ADELWCGEGQLSTIWAETADNARSAARTFVLG-GLSDK 780
A+EL G+ ++ST + + A AR V G S+K
Sbjct: 479 AEELIYGKEKVSTGASNDIERATEIARKMVTQWGFSEK 516
>TIGR_CMR|VC_0637 [details] [associations]
symbol:VC_0637 "cell division protein FtsH" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0000910 "cytokinesis"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299
RefSeq:NP_230286.1 ProteinModelPortal:Q9KU86 SMR:Q9KU86
DNASU:2615425 GeneID:2615425 KEGG:vch:VC0637 PATRIC:20080383
ProtClustDB:CLSK874054 Uniprot:Q9KU86
Length = 651
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 159/398 (39%), Positives = 236/398 (59%)
Query: 389 QFMKSGARVRRAYGKGLPQYL-ERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRG 447
Q G + ++GK + + E + FSDVAG + + +++E+V + +++ G
Sbjct: 126 QMQGGGGKGAMSFGKSKARMMSEDQIKTTFSDVAGCDEAKEDVKELVDYLRDPSRFQKLG 185
Query: 448 VRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAK 507
+ KTLLAKA+AGEA V FF+IS S FVE++VGVGASRVR ++++AK
Sbjct: 186 GKIPTGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAK 245
Query: 508 DNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPD 567
+P ++FIDE+DAVGR+RG G G ER+ TLNQ+LV +DGFEG +I IA+TNRPD
Sbjct: 246 KASPCIIFIDEIDAVGRQRGAGVGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPD 305
Query: 568 ILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAEL 627
+LDPAL+RPGRFDR++ + P + GR +ILKVH RK P+A+DV+ +A T G GA+L
Sbjct: 306 VLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRKVPLANDVEPSLIARGTPGFSGADL 365
Query: 628 ANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERS---SETWRQ-VAINEAAM 683
AN+V AA+ R + ++ +++ +++ M+ + RS SE ++ A +EA
Sbjct: 366 ANLVNEAALFAARGNKRNVS---MVEFELAKDKIMMGAERRSMVMSEEIKESTAYHEAGH 422
Query: 684 AVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRA 743
AVV P+ + V+I PR GR LG V M + + M S+Q L I+ R
Sbjct: 423 AVVGRLVPEHDPVYKVSIIPR-GRALG-VTMYLPEQD-RVSM-SKQHLESMISSLYGGRL 478
Query: 744 ADELWCGEGQLSTIWAETADNARSAARTFVLG-GLSDK 780
A+EL G+ ++ST + + A AR V G S+K
Sbjct: 479 AEELIYGKEKVSTGASNDIERATEIARKMVTQWGFSEK 516
>TAIR|locus:2154568 [details] [associations]
symbol:ftsh9 "FTSH protease 9" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0009941 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 EMBL:AB016885
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798
ProtClustDB:CLSN2689036 EMBL:AY059856 IPI:IPI00541670
RefSeq:NP_568892.1 UniGene:At.7754 ProteinModelPortal:Q9FIM2
SMR:Q9FIM2 STRING:Q9FIM2 MEROPS:M41.A03 PaxDb:Q9FIM2 PRIDE:Q9FIM2
EnsemblPlants:AT5G58870.1 GeneID:836004 KEGG:ath:AT5G58870
GeneFarm:2516 TAIR:At5g58870 InParanoid:Q9FIM2 OMA:SSKRGEN
PhylomeDB:Q9FIM2 Genevestigator:Q9FIM2 Uniprot:Q9FIM2
Length = 806
Score = 627 (225.8 bits), Expect = 6.1e-64, Sum P(2) = 6.1e-64
Identities = 158/394 (40%), Positives = 219/394 (55%)
Query: 396 RVRRAYGKGLPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXX 455
R R++ G G + G + F+DVAG+ + + ELEEIV+F + + Y R G R
Sbjct: 307 RTRKSGGPGGGKVSGDGETITFADVAGVDEAKEELEEIVEFLKNPDRYVRLGARPPRGVL 366
Query: 456 XXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVF 515
KTLLAKAVAGE+ V F S SAS+FVE+YVG+GASRVR L+ AK APS++F
Sbjct: 367 LVGLPGTGKTLLAKAVAGESDVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIF 426
Query: 516 IDELDAVGRER-GLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALV 574
IDE+DAV + R G + ER+ TLNQLL +DGF+ VI + +TNR D+LDPAL
Sbjct: 427 IDEIDAVAKSRDGKFRMVSNDEREQTLNQLLTEMDGFDSSSAVIVLGATNRADVLDPALR 486
Query: 575 RPGRFDRKIFIPKPGLIGRMEILKVHARKK--PMADDVDYLAVASMTDGMVGAELANIVE 632
RPGRFDR + + P +GR ILKVH KK P+ DDV+ ++ASMT G GA+LAN+V
Sbjct: 487 RPGRFDRVVTVESPDKVGRESILKVHVSKKELPLGDDVNLASIASMTTGFTGADLANLVN 546
Query: 633 VAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQV-AINEAAMAVVAVNFP 691
AA+ R + + D + A + G+ + R + + V A +EA AVV
Sbjct: 547 EAALLAGRKSKMTVDKIDFIHAVERSIAGIEKKTARLKGSEKAVVARHEAGHAVVGTAVA 606
Query: 692 DL----KNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADEL 747
L +E ++I PR+G LG+ + H +L L + L RAA+E+
Sbjct: 607 SLLSGQSRVEKLSILPRSGGALGFTYIPPTHED--RYLLFIDELHGRLVTLLGGRAAEEV 664
Query: 748 WCGEGQLSTIWAETADNARSAARTFVLG-GLSDK 780
G++ST + A A V GL++K
Sbjct: 665 -VYSGRISTGALDDIRRATDMAYKAVAEYGLNEK 697
Score = 43 (20.2 bits), Expect = 6.1e-64, Sum P(2) = 6.1e-64
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 129 IFSLKDEGKLKHVIKSPSG-SLRQKAEPVL 157
+F LKD+G L+ S S L + +E +L
Sbjct: 201 LFKLKDDGNLQESETSSSSIKLSESSETML 230
>UNIPROTKB|P0AAI3 [details] [associations]
symbol:ftsH species:83333 "Escherichia coli K-12"
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0006508
"proteolysis" evidence=IEA;IDA] [GO:0043273 "CTPase activity"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA;IDA]
[GO:0030145 "manganese ion binding" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA;IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0008270 GO:GO:0006508 EMBL:U18997
GO:GO:0004222 GO:GO:0016887 GO:GO:0030145 GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0043273 EMBL:U01376
HOGENOM:HOG000217276 KO:K03798 EMBL:M83138 PIR:S35109
RefSeq:NP_417645.1 RefSeq:YP_491363.1 PDB:1LV7 PDBsum:1LV7
ProteinModelPortal:P0AAI3 SMR:P0AAI3 DIP:DIP-35828N IntAct:P0AAI3
MINT:MINT-1226643 MEROPS:M41.001 PaxDb:P0AAI3 PRIDE:P0AAI3
EnsemblBacteria:EBESCT00000000369 EnsemblBacteria:EBESCT00000000370
EnsemblBacteria:EBESCT00000017485 GeneID:12933986 GeneID:947690
KEGG:ecj:Y75_p3098 KEGG:eco:b3178 PATRIC:32121774 EchoBASE:EB1469
EcoGene:EG11506 OMA:RSIIDQC ProtClustDB:PRK10733
BioCyc:EcoCyc:EG11506-MONOMER BioCyc:ECOL316407:JW3145-MONOMER
BioCyc:MetaCyc:EG11506-MONOMER SABIO-RK:P0AAI3
EvolutionaryTrace:P0AAI3 Genevestigator:P0AAI3 Uniprot:P0AAI3
Length = 644
Score = 650 (233.9 bits), Expect = 9.7e-64, P = 9.7e-64
Identities = 155/398 (38%), Positives = 230/398 (57%)
Query: 389 QFMKSGARVRRAYGKGLPQYL-ERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRG 447
Q G + ++GK + L E + F+DVAG + + E+ E+V++ +++ G
Sbjct: 122 QMQGGGGKGAMSFGKSKARMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLG 181
Query: 448 VRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAK 507
+ KTLLAKA+AGEA V FF+IS S FVE++VGVGASRVR ++++AK
Sbjct: 182 GKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAK 241
Query: 508 DNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPD 567
AP ++FIDE+DAVGR+RG G G ER+ TLNQ+LV +DGFEG +I IA+TNRPD
Sbjct: 242 KAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPD 301
Query: 568 ILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAEL 627
+LDPAL+RPGRFDR++ + P + GR +ILKVH R+ P+A D+D +A T G GA+L
Sbjct: 302 VLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADL 361
Query: 628 ANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERS---SETWRQ-VAINEAAM 683
AN+V AA+ R + ++ +++ + +++ M+ + RS +E ++ A +EA
Sbjct: 362 ANLVNEAALFAARGNKRVVS---MVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAGH 418
Query: 684 AVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRA 743
A++ P+ + VTI PR GR LG + SRQ L I+ R
Sbjct: 419 AIIGRLVPEHDPVHKVTIIPR-GRALGVTFFLPEGDAISA---SRQKLESQISTLYGGRL 474
Query: 744 ADELWCGEGQLSTIWAETADNARSAARTFVLG-GLSDK 780
A+E+ G +ST + A + AR V G S+K
Sbjct: 475 AEEIIYGPEHVSTGASNDIKVATNLARNMVTQWGFSEK 512
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
Identities = 154/368 (41%), Positives = 218/368 (59%)
Query: 415 VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGE 474
+ F++VAG+ + + E+ E+V+F E ++ G R KTLLAKA+AGE
Sbjct: 156 ITFANVAGVDEAKQEVGEVVEFLKSREKFQALGARIPKGILLIGPPGTGKTLLAKAIAGE 215
Query: 475 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 534
AGV FFSIS S+FVE++VGVGASRVR L+ +AK NAP ++FIDE+DAVGR+RG G G
Sbjct: 216 AGVPFFSISGSEFVEMFVGVGASRVRDLFDQAKKNAPCIIFIDEIDAVGRQRGAGLGGGH 275
Query: 535 QERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRM 594
ER+ TLNQ+LV +DGF+ +VI IA+TNRPDILDPAL+RPGRFDR++ + KP + GR
Sbjct: 276 DEREQTLNQILVEMDGFDTDTSVIVIAATNRPDILDPALLRPGRFDRRVVLDKPDITGRE 335
Query: 595 EILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 654
ILK+HA+ KP+AD V+ +A T G GA+LAN++ AAI R R + T+DL ++
Sbjct: 336 AILKIHAKGKPLADTVNLENLAKQTVGFSGADLANLLNEAAILAARKNRKVVETEDLEES 395
Query: 655 AQIEERGMLDRKERSSETWRQV-AINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVR 713
G + R S ++V A +E +V + ++I R G LG+ R
Sbjct: 396 IDRVIAGPERKSRRISTQEKEVTAYHETGHGLVLRLVQGADPVHKISIVAR-GMTLGHTR 454
Query: 714 MKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFV 773
+ ++ +++R + LA A+EL E LST ++ A A V
Sbjct: 455 QLPNEDRY---LMTRSQFKAMMAGLLAGYVAEELTFKE--LSTGASDDLRRATDIAHKMV 509
Query: 774 LG-GLSDK 780
G+SDK
Sbjct: 510 TSYGMSDK 517
>TIGR_CMR|CJE_1259 [details] [associations]
symbol:CJE_1259 "cell division protein FtsH"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
OMA:RARASMP RefSeq:YP_179247.1 ProteinModelPortal:Q5HTY8 SMR:Q5HTY8
STRING:Q5HTY8 GeneID:3231766 KEGG:cjr:CJE1259 PATRIC:20044314
ProtClustDB:CLSK872348 BioCyc:CJEJ195099:GJC0-1285-MONOMER
Uniprot:Q5HTY8
Length = 645
Score = 642 (231.1 bits), Expect = 6.9e-63, P = 6.9e-63
Identities = 146/369 (39%), Positives = 220/369 (59%)
Query: 415 VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGE 474
VKFSDVAG+ + + E++EIV F + E Y + G + KTLLAKAVAGE
Sbjct: 175 VKFSDVAGVEEAKEEVKEIVDFLKYPERYIKLGAKIPKGLLLVGPPGTGKTLLAKAVAGE 234
Query: 475 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 534
A V FFS+S S F+E++VGVGASRVR L++ AK AP++VFIDE+DA+G+ R GG
Sbjct: 235 ADVPFFSVSGSSFIEMFVGVGASRVRDLFENAKKEAPAIVFIDEIDAIGKSRAASGMMGG 294
Query: 535 Q-ERDATLNQLLVCLDGFEGRGN-VITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
ER+ TLNQLL +DGF + VI +A+TNRP++LD AL+RPGRFDR++ + KP G
Sbjct: 295 NDEREQTLNQLLAEMDGFGTESSPVIVLAATNRPEVLDAALLRPGRFDRQVLVDKPDFKG 354
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLL 652
R +ILKVH + ++ V +A +T G+ GA+LANI+ AA+ RD + + +DL+
Sbjct: 355 RCDILKVHMKDVKISPKVKVEDIARLTAGLAGADLANIINEAALLAGRDSKKYVEQNDLV 414
Query: 653 QAAQIEERGMLDRKERSSETWRQ-VAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGY 711
+A + G+ + R +E ++ V +E A++A K + V++ PR LGY
Sbjct: 415 EAVERAIAGLEKKSRRINEKEKKIVTYHECGHALIAETTKGAKRVSKVSVIPRGLAALGY 474
Query: 712 VRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAART 771
+ KF ++ + L+ + V L RAA+E++ GE +ST + + A +
Sbjct: 475 TLNTPEENKF---LMQKHELIAEVDVLLGGRAAEEVFIGE--ISTGASNDLERATDIIKA 529
Query: 772 FV-LGGLSD 779
+ + G+S+
Sbjct: 530 MISMYGMSE 538
>TAIR|locus:2052806 [details] [associations]
symbol:VAR2 "VARIEGATED 2" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008237 "metallopeptidase activity"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010027
"thylakoid membrane organization" evidence=RCA;IMP] [GO:0009507
"chloroplast" evidence=IDA] [GO:0010205 "photoinhibition"
evidence=IMP] [GO:0031977 "thylakoid lumen" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA;TAS]
[GO:0016020 "membrane" evidence=IDA] [GO:0030163 "protein catabolic
process" evidence=IDA] [GO:0072593 "reactive oxygen species
metabolic process" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0034660 "ncRNA
metabolic process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0010206
"photosystem II repair" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0008237 GO:GO:0004222 EMBL:AC004669
GO:GO:0010027 GO:GO:0072593 GO:GO:0010205 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0031977
GO:GO:0004176 GO:GO:0010206 HOGENOM:HOG000217276 KO:K03798
GO:GO:0010304 EMBL:AF135189 EMBL:AY045599 EMBL:AY093791
EMBL:AK221155 IPI:IPI00546467 PIR:F84714 RefSeq:NP_850156.1
UniGene:At.22024 UniGene:At.71129 UniGene:At.75189
ProteinModelPortal:O80860 SMR:O80860 IntAct:O80860 STRING:O80860
MEROPS:M41.005 World-2DPAGE:0003:O80860 PaxDb:O80860 PRIDE:O80860
ProMEX:O80860 EnsemblPlants:AT2G30950.1 GeneID:817646
KEGG:ath:AT2G30950 GeneFarm:2504 TAIR:At2g30950 InParanoid:O80860
OMA:LEIIAMR PhylomeDB:O80860 ProtClustDB:CLSN2679937
Genevestigator:O80860 Uniprot:O80860
Length = 695
Score = 641 (230.7 bits), Expect = 8.8e-63, P = 8.8e-63
Identities = 160/387 (41%), Positives = 220/387 (56%)
Query: 401 YGKGLPQY-LERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXX 459
+G+ ++ +E V F DVAG+ + + + E+V+F E + G +
Sbjct: 209 FGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGAKIPKGVLLIGP 268
Query: 460 XXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDEL 519
KTLLAKA+AGEAGV FFSIS S+FVE++VGVGASRVR L+++AK+NAP +VF+DE+
Sbjct: 269 PGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEI 328
Query: 520 DAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRF 579
DAVGR+RG G G ER+ TLNQLL +DGFEG VI +A+TNR DILD AL+RPGRF
Sbjct: 329 DAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRF 388
Query: 580 DRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMM 639
DR++ + P + GR +ILKVHA K +DV +A T G GA+LAN++ AAI
Sbjct: 389 DRQVSVDVPDVKGRTDILKVHAGNKKFDNDVSLEIIAMRTPGFSGADLANLLNEAAILAG 448
Query: 640 RDGRTEITT---DDLLQ--AAQIEERGMLDRKERSSETWRQVAINEAAMAVVAVNFPDLK 694
R RT I++ DD + A +E M D K +S VA +E AV P
Sbjct: 449 RRARTSISSKEIDDSIDRIVAGMEGTVMTDGKSKSL-----VAYHEVGHAVCGTLTPGHD 503
Query: 695 NIEFVTIAPRA-GRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQ 753
++ VT+ PR R L + D ++S+Q L I L RAA+E+ G+ +
Sbjct: 504 AVQKVTLIPRGQARGLTWFIPSDDPT-----LISKQQLFARIVGGLGGRAAEEIIFGDSE 558
Query: 754 LSTIWAETADNARSAARTFVLG-GLSD 779
++T AR V G+SD
Sbjct: 559 VTTGAVGDLQQITGLARQMVTTFGMSD 585
>CGD|CAL0004443 [details] [associations]
symbol:orf19.2057 species:5476 "Candida albicans" [GO:0005745
"m-AAA complex" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 CGD:CAL0004443 GO:GO:0016021
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 EMBL:AACQ01000031 EMBL:AACQ01000030
MEROPS:M41.003 RefSeq:XP_719505.1 RefSeq:XP_719629.1
ProteinModelPortal:Q5AD10 SMR:Q5AD10 GeneID:3638753 GeneID:3638884
KEGG:cal:CaO19.2057 KEGG:cal:CaO19.9604 Uniprot:Q5AD10
Length = 846
Score = 596 (214.9 bits), Expect = 1.7e-62, Sum P(3) = 1.7e-62
Identities = 148/389 (38%), Positives = 225/389 (57%)
Query: 410 ERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAK 469
E V +KF DVAG+ + + E+ E VKF + E Y + G + KTLLAK
Sbjct: 365 ETDVKIKFKDVAGMAEAKQEVMEFVKFLQNPEKYEKLGAKIPRGAILSGPPGTGKTLLAK 424
Query: 470 AVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLI 529
A AGEAGV F+S+S S+FVE++VGVGASRVR L++ A++NAPS+VF+DE+DA+G++R
Sbjct: 425 ATAGEAGVPFYSVSGSEFVEMFVGVGASRVRDLFKTARENAPSIVFVDEIDAIGKQRSKG 484
Query: 530 KGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKP 588
+G ER+ TLNQLLV +DGF+ +V+ +A TNRPDILD AL+RPGRFDR + I P
Sbjct: 485 NATGANDERETTLNQLLVEMDGFDTSDHVVVLAGTNRPDILDRALMRPGRFDRHVHIDNP 544
Query: 589 GLIGRMEILKVHARKKPMADDVDY-LA--VASMTDGMVGAELANIVEVAAINMMRDGRTE 645
L+GR EI VH +K + D+D L+ +A++T G GA++AN+ AA+ R E
Sbjct: 545 ELLGRKEIFDVHLQKITLQKDIDPDLSGRLAALTPGFSGADIANVCNEAALIAARYN-AE 603
Query: 646 ITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAP 703
T + A G +++K + + E + VA +EA A+ + V+I P
Sbjct: 604 FVTLRHFELAIERVIGGVEKKSKLLNPEEQKIVAYHEAGHAICGWYLKYAHPLLKVSIIP 663
Query: 704 RAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETAD 763
R LGY + ++ + ++S L D + + L R ++EL +++ + D
Sbjct: 664 RGQGALGYAQ----YLPPDQYLMSTLQLYDRMIMTLGGRVSEEL-----HFASVTSGAHD 714
Query: 764 NARSA---ARTFVLG-GLSDKHFGLSNFW 788
+ + A++ VL G+S K G+ N++
Sbjct: 715 DFKKVTGIAQSMVLRFGMS-KTVGMVNYY 742
Score = 37 (18.1 bits), Expect = 1.7e-62, Sum P(3) = 1.7e-62
Identities = 5/15 (33%), Positives = 12/15 (80%)
Query: 282 LQKYEESLQDARDNY 296
++ +E +L++A+D Y
Sbjct: 286 VESFERNLREAQDKY 300
Score = 37 (18.1 bits), Expect = 1.7e-62, Sum P(3) = 1.7e-62
Identities = 6/21 (28%), Positives = 12/21 (57%)
Query: 36 PFSCKNQNFNPQNEDRNKNQN 56
PF NP+ +D++ ++N
Sbjct: 165 PFGMFFNKANPKQDDKDSSKN 185
>TIGR_CMR|GSU_1180 [details] [associations]
symbol:GSU_1180 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952233.1 ProteinModelPortal:Q74DY5 SMR:Q74DY5
GeneID:2686793 KEGG:gsu:GSU1180 PATRIC:22025134 OMA:VCQWGMS
ProtClustDB:CLSK828230 BioCyc:GSUL243231:GH27-1166-MONOMER
Uniprot:Q74DY5
Length = 617
Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
Identities = 167/415 (40%), Positives = 227/415 (54%)
Query: 375 QGEAEQNPHLKMAMQFMKSGARVRRAYGKGLPQYLERGVDVKFSDVAGLGKIRLELEEIV 434
+G Q P M F KSGA++ K V V F DVAG+ ++EL+EIV
Sbjct: 142 RGMRGQGPTSVMG-NFSKSGAKMYTPSAK---------VKVTFDDVAGMENPKMELKEIV 191
Query: 435 KFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGV 494
+ + ++R G + KTLLA+AVAGEA V F SISASQF+E++VGV
Sbjct: 192 DYLRDPKKFQRIGGKVPKGVLLVGPPGTGKTLLARAVAGEADVTFLSISASQFIEMFVGV 251
Query: 495 GASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGR 554
GA RVR L+ AK +APS++FIDELDAVGR RG G G ER+ TLNQLL +DGF+
Sbjct: 252 GAGRVRDLFATAKKSAPSIIFIDELDAVGRSRGAGLGGGHDEREQTLNQLLSEMDGFDSH 311
Query: 555 GNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLA 614
VI +A+TNRPD+LDPAL+RPGRFDR + I +P R +IL VH RK P+ DVD
Sbjct: 312 DEVIVMAATNRPDVLDPALLRPGRFDRHVVIDRPDWRDREKILHVHTRKIPLDKDVDLAV 371
Query: 615 VASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWR 674
+A T GM GA+L N+V AAI R+ +T + + +A G +RK +E +
Sbjct: 372 IARGTPGMAGADLENLVNEAAILAARENAATVTMEHMERAKDKVLMGG-ERKMFITEQEK 430
Query: 675 QV-AINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLD 733
++ A +EA +VA P + VTI PR G+ LG + + ++ + L++
Sbjct: 431 RITAYHEAGHTIVAKLLPGTDPVHKVTIIPR-GQALGVTQQLPEDDRYH---YPKSYLMN 486
Query: 734 HITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFVLG-GLSDKHFGLSNF 787
++V L R A+ G+ LST A V G+SDK G F
Sbjct: 487 RLSVALGGRQAERAVFGD--LSTGAQNDLKMVNDLAEKMVCQWGMSDK-IGAMTF 538
>TAIR|locus:2075581 [details] [associations]
symbol:ftsh7 "FTSH protease 7" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
GO:GO:0009535 EMBL:AL133292 GO:GO:0004176 HOGENOM:HOG000217276
KO:K03798 EMBL:AY099737 EMBL:BT000368 IPI:IPI00522102 PIR:T45642
RefSeq:NP_566889.1 UniGene:At.43767 ProteinModelPortal:Q9SD67
SMR:Q9SD67 MEROPS:M41.A04 PaxDb:Q9SD67 PRIDE:Q9SD67
EnsemblPlants:AT3G47060.1 GeneID:823859 KEGG:ath:AT3G47060
GeneFarm:2514 TAIR:At3g47060 InParanoid:Q9SD67 OMA:SNQVQKV
PhylomeDB:Q9SD67 ProtClustDB:CLSN2689036 Genevestigator:Q9SD67
Uniprot:Q9SD67
Length = 802
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 156/369 (42%), Positives = 210/369 (56%)
Query: 396 RVRRAYGKGLPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXX 455
R R+A G + G + F+DVAG+ + + ELEEIV+F + E Y R G R
Sbjct: 303 RTRKAGGPDGGKVSGGGETITFADVAGVDEAKEELEEIVEFLRNPEKYVRLGARPPRGVL 362
Query: 456 XXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVF 515
KTLLAKAVAGEA V F S SAS+FVE+YVG+GASRVR L+ AK APS++F
Sbjct: 363 LVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIF 422
Query: 516 IDELDAVGRER-GLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALV 574
IDE+DAV + R G + ER+ TLNQLL +DGF+ VI + +TNR D+LDPAL
Sbjct: 423 IDEIDAVAKSRDGKFRMGSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRADVLDPALR 482
Query: 575 RPGRFDRKIFIPKPGLIGRMEILKVHARKK--PMADDVDYLAVASMTDGMVGAELANIVE 632
RPGRFDR + + P IGR IL+VH KK P+ DDV+ ++ASMT G GA+LAN+V
Sbjct: 483 RPGRFDRVVTVETPDKIGRESILRVHVSKKELPLGDDVNLGSIASMTTGFTGADLANLVN 542
Query: 633 VAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQV-AINEAAMAVVAVNFP 691
AA+ R +T + D +QA + G+ + R + V A +EA AVV
Sbjct: 543 EAALLAGRKNKTNVEKIDFIQAVERSIAGIEKKSARLKGNEKAVVARHEAGHAVVGTAVA 602
Query: 692 DL----KNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADEL 747
+L +E ++I PR G LG+ + +L LL + L RAA+E+
Sbjct: 603 NLLTGQPRVEKLSILPRTGGALGFTYIPPTSED--RYLLFIDELLGRLVTLLGGRAAEEV 660
Query: 748 WCGEGQLST 756
G++ST
Sbjct: 661 -VYSGRIST 668
>DICTYBASE|DDB_G0284249 [details] [associations]
symbol:DDB_G0284249 "peptidase M41, FtsH
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006461 "protein complex assembly" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0044351 "macropinocytosis" evidence=RCA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284249 GO:GO:0016021 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0006461 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:AAFI02000064 RefSeq:XP_638674.1 ProteinModelPortal:Q54PX1
SMR:Q54PX1 MEROPS:M41.A17 EnsemblProtists:DDB0229917 GeneID:8624503
KEGG:ddi:DDB_G0284249 InParanoid:Q54PX1 OMA:VSIYGMN
ProtClustDB:CLSZ2846729 Uniprot:Q54PX1
Length = 764
Score = 592 (213.5 bits), Expect = 2.9e-60, Sum P(2) = 2.9e-60
Identities = 145/354 (40%), Positives = 205/354 (57%)
Query: 402 GKGLPQYLERGVD-VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXX 460
GK E+ VKFSDVAGLG+ ++E+EE V F + + + G +
Sbjct: 285 GKSTANKFEKSTSTVKFSDVAGLGEAKVEIEEFVNFLKNPKKFHDIGAKIPRGAILVGPP 344
Query: 461 XXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELD 520
KTL+AKA AGEA V F+S S S FVE++VGVG SRVR L+++A+ NAP +VFIDE+D
Sbjct: 345 GTGKTLIAKATAGEANVPFYSTSGSDFVEMFVGVGPSRVRDLFEQARKNAPCIVFIDEID 404
Query: 521 AVGRERGLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRF 579
AVGR RG SG ER+ TLNQLLV +DGF+ NV+ +A+TNRPDILD AL+RPGRF
Sbjct: 405 AVGRARGKGGFSGSNDERENTLNQLLVEMDGFKPLKNVVVLAATNRPDILDKALLRPGRF 464
Query: 580 DRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLA-VASMTDGMVGAELANIVEVAAINM 638
DR+I I P L R EI +VH + ++Y ++ +T G GA++AN+ AA+
Sbjct: 465 DRQITIDNPDLKSREEIFRVHLAALLLDKSINYAERLSKLTPGFSGADIANVCNEAALIA 524
Query: 639 MRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDLKNI 696
R EI T + AA G L++K + S R VA +EA AVV+ +
Sbjct: 525 ARR-HAEIITLEHFDAAVDRVIGGLEKKNKVLSPTEKRTVAYHEAGHAVVSWFLKHCHPL 583
Query: 697 EFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCG 750
V+I PR LGY + ++ ++ + +++ + D + + L R A++L G
Sbjct: 584 LKVSIVPRGVAALGYAQ----YLPKEQFLQNQEQIFDMMCMALGGRVAEQLTFG 633
Score = 43 (20.2 bits), Expect = 2.9e-60, Sum P(2) = 2.9e-60
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 37 FSCKNQNFNPQNEDRNKNQNS 57
FS N F QNE N+NQ S
Sbjct: 42 FSSNNNLFKNQNE--NENQTS 60
Score = 39 (18.8 bits), Expect = 7.8e-60, Sum P(2) = 7.8e-60
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 40 KNQNFNPQNEDRNKNQNSK 58
K N N N+D N+++K
Sbjct: 109 KGNNNNKDNKDNKDNKDNK 127
>TAIR|locus:2057386 [details] [associations]
symbol:ftsh4 "FTSH protease 4" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA;ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=ISS] [GO:0016020
"membrane" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0009536 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
GO:GO:0005743 GO:GO:0046872 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
EMBL:AC004747 GO:GO:0004176 HOGENOM:HOG000217276 EMBL:AK220842
IPI:IPI00534293 PIR:T02610 RefSeq:NP_565616.1 UniGene:At.23415
ProteinModelPortal:O80983 SMR:O80983 STRING:O80983 MEROPS:M41.004
PaxDb:O80983 PRIDE:O80983 EnsemblPlants:AT2G26140.1 GeneID:817154
KEGG:ath:AT2G26140 GeneFarm:2508 TAIR:At2g26140 InParanoid:O80983
OMA:HTEGALP PhylomeDB:O80983 ProtClustDB:CLSN2688437
Genevestigator:O80983 Uniprot:O80983
Length = 717
Score = 612 (220.5 bits), Expect = 1.0e-59, P = 1.0e-59
Identities = 159/401 (39%), Positives = 225/401 (56%)
Query: 394 GARVR-RAYGKGLPQY--LERGVD--VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGV 448
GA + R GKGL + ++ +D KFSDV G+ + + ELEEIV + + + R G
Sbjct: 198 GALIEDRGIGKGLGLHEEVQPSMDSSTKFSDVKGVDEAKAELEEIVHYLRDPKRFTRLGG 257
Query: 449 RXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKD 508
+ KT+LA+A+AGEAGV FFS S S+F E++VGVGA RVR L+ AK
Sbjct: 258 KLPKGVLLVGPPGTGKTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKK 317
Query: 509 NAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDI 568
+P ++FIDE+DA+G R Q TLNQ+LV LDGF+ +I +A+TN P+
Sbjct: 318 CSPCIIFIDEIDAIGGSRN---PKDQQYMKMTLNQMLVELDGFKQNEGIIVVAATNFPES 374
Query: 569 LDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELA 628
LD ALVRPGRFDR I +P P + GR +IL+ H K A+DVD + +A T G GA+LA
Sbjct: 375 LDKALVRPGRFDRHIVVPNPDVEGRRQILESHMSKVLKAEDVDLMIIARGTPGFSGADLA 434
Query: 629 NIVEVAAINMMRDGRTEITTDDLLQAAQIEERGML--DRKER--SSETWRQVAINEAAMA 684
N+V VAA+ DG ++T DL A ++R M+ +RK S E+ + A +E A
Sbjct: 435 NLVNVAALKAAMDGSKDVTMSDLEFA---KDRIMMGSERKSAVISDESRKLTAFHEGGHA 491
Query: 685 VVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAA 744
+VA++ + TI PR G LG V D E +SR+ +L + V + R A
Sbjct: 492 LVAIHTEGALPVHKATIVPR-GMALGMVSQLPDK---DETSISRKQMLARLDVCMGGRVA 547
Query: 745 DELWCGEGQLSTIWAETADNARSAARTFVLG-GLSDKHFGL 784
+EL GE ++++ + + A AR V G+S K GL
Sbjct: 548 EELIFGESEVTSGASSDLEQATKLARAMVTKFGMS-KEVGL 587
>POMBASE|SPBC543.09 [details] [associations]
symbol:yta12 "mitochondrial m-AAA protease Yta12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005745 "m-AAA complex" evidence=ISO] [GO:0006091 "generation
of precursor metabolites and energy" evidence=NAS] [GO:0006465
"signal peptide processing" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0008237 "metallopeptidase activity" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0033108 "mitochondrial respiratory chain complex
assembly" evidence=ISO] [GO:0045041 "protein import into
mitochondrial intermembrane space" evidence=ISO] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC543.09
GO:GO:0005524 GO:GO:0046872 EMBL:CU329671 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0004222 GO:GO:0006091
GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
KO:K08956 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 OMA:LYRFVTT
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0045041 GO:GO:0006465
GO:GO:0033108 RefSeq:NP_596797.1 ProteinModelPortal:Q9HGM3
SMR:Q9HGM3 STRING:Q9HGM3 MEROPS:M41.A14 EnsemblFungi:SPBC543.09.1
GeneID:2541079 KEGG:spo:SPBC543.09 NextBio:20802192 Uniprot:Q9HGM3
Length = 773
Score = 606 (218.4 bits), Expect = 4.5e-59, P = 4.5e-59
Identities = 141/369 (38%), Positives = 214/369 (57%)
Query: 410 ERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAK 469
E + +KF+DVAG+ + + E+ E VKF + + Y R G + KTLLAK
Sbjct: 288 ETDIKIKFADVAGVDEAKEEIMEFVKFLKNPKFYERLGAKIPRGAILSGPPGTGKTLLAK 347
Query: 470 AVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLI 529
A AGEA V F S+S S+F+E++VGVG SRVR L+ A+ NAP ++FIDE+DA+G+ RG
Sbjct: 348 ATAGEANVPFLSVSGSEFLEMFVGVGPSRVRDLFATARKNAPCIIFIDEIDAIGKARGRG 407
Query: 530 KGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKP 588
G ER++TLNQLLV +DGF +++ A TNRPD+LDPAL+RPGRFDR+I I +P
Sbjct: 408 GQFGSNDERESTLNQLLVEMDGFTSSEHIVVFAGTNRPDVLDPALLRPGRFDRQITIDRP 467
Query: 589 GLIGRMEILKVHARKKPMADDVDYLA--VASMTDGMVGAELANIVEVAAINMMRDGRTEI 646
+ GR +I KVH + AD++D +A +A +T G GA++ N+ A+ R E+
Sbjct: 468 DIGGREQIFKVHLKHIKAADNIDLIAKRLAVLTSGFTGADIMNVCNEGALIAARSNSNEV 527
Query: 647 TTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPR 704
QA + G L++K R S E VA +EA AV + + V+I PR
Sbjct: 528 QMVHFEQAIERVTAG-LEKKSRVLSPEEKNTVAHHEAGHAVAGWFMEYVDPLLKVSIIPR 586
Query: 705 AGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADN 764
A + LGY ++ + ++SR +LD + + LA R ++E++ G ++++ ++
Sbjct: 587 A-QALGYA----SYLPKDQYLMSRGQILDQMGMALAGRVSEEIFFGPEKITSGASDDFQK 641
Query: 765 ARSAARTFV 773
A+ +V
Sbjct: 642 VTRMAQAYV 650
>CGD|CAL0000075 [details] [associations]
symbol:AFG3 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005745 "m-AAA complex"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 494 (179.0 bits), Expect = 3.0e-58, Sum P(3) = 3.0e-58
Identities = 101/204 (49%), Positives = 134/204 (65%)
Query: 410 ERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAK 469
E V +KF DVAG + + E+ E VKF Y + G + KTLLAK
Sbjct: 279 ENEVKIKFKDVAGCDESKEEIMEFVKFLQDPHKYEKLGAKIPRGAILSGPPGTGKTLLAK 338
Query: 470 AVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLI 529
A AGEAGV F S+S S+FVE++VGVGASRVR L++ A++ AP+++F+DE+DA+G+ERG
Sbjct: 339 ATAGEAGVPFLSVSGSEFVEMFVGVGASRVRDLFKTAREMAPAIIFVDEIDAIGKERGNG 398
Query: 530 KGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPG 589
+ G ER+ TLNQLLV +DGF+ +V+ +A TNRPDILD AL+RPGRFDR I I P
Sbjct: 399 RMGGNDERENTLNQLLVEMDGFDTTDHVVVLAGTNRPDILDKALLRPGRFDRHISIDVPD 458
Query: 590 LIGRMEILKVHARKKPM--ADDVD 611
+ GR +I KVH K + D+D
Sbjct: 459 VEGRKQIFKVHLNKLKLKSVQDID 482
Score = 105 (42.0 bits), Expect = 3.0e-58, Sum P(3) = 3.0e-58
Identities = 45/181 (24%), Positives = 84/181 (46%)
Query: 608 DDVDYLA--VASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDR 665
++++ LA +A++T G GA++AN A+ R+ + T QA + G L++
Sbjct: 499 EEIEKLAGRLAALTPGFAGADIANCCNEGALIAAREDAPAVDTYHFEQAIERVIAG-LEK 557
Query: 666 KER--SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKE 723
K R S E + VA +EA A+ + V+I PR LGY + ++ +
Sbjct: 558 KSRILSPEEKKTVAYHEAGHAICGWFLQYADPLVKVSIIPRGQGALGYAQ----YLPKDQ 613
Query: 724 GMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSA---ARTFVLG-GLSD 779
+ S++ + + L R ++EL T+ + +D+ + A+ +L G+SD
Sbjct: 614 YLTSQEQFKHRMIMTLGGRVSEEL-----HFDTVTSGASDDFKKITQMAQQMILKLGMSD 668
Query: 780 K 780
K
Sbjct: 669 K 669
Score = 45 (20.9 bits), Expect = 3.0e-58, Sum P(3) = 3.0e-58
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 31 FQFCTP--FSCKNQNFNPQNEDRNKNQNS 57
F TP F Q FN N D K+ N+
Sbjct: 29 FSTYTPLAFRTSRQLFNKSNNDNKKSNNN 57
>UNIPROTKB|Q5AJC2 [details] [associations]
symbol:AFG3 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 494 (179.0 bits), Expect = 3.0e-58, Sum P(3) = 3.0e-58
Identities = 101/204 (49%), Positives = 134/204 (65%)
Query: 410 ERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAK 469
E V +KF DVAG + + E+ E VKF Y + G + KTLLAK
Sbjct: 279 ENEVKIKFKDVAGCDESKEEIMEFVKFLQDPHKYEKLGAKIPRGAILSGPPGTGKTLLAK 338
Query: 470 AVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLI 529
A AGEAGV F S+S S+FVE++VGVGASRVR L++ A++ AP+++F+DE+DA+G+ERG
Sbjct: 339 ATAGEAGVPFLSVSGSEFVEMFVGVGASRVRDLFKTAREMAPAIIFVDEIDAIGKERGNG 398
Query: 530 KGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPG 589
+ G ER+ TLNQLLV +DGF+ +V+ +A TNRPDILD AL+RPGRFDR I I P
Sbjct: 399 RMGGNDERENTLNQLLVEMDGFDTTDHVVVLAGTNRPDILDKALLRPGRFDRHISIDVPD 458
Query: 590 LIGRMEILKVHARKKPM--ADDVD 611
+ GR +I KVH K + D+D
Sbjct: 459 VEGRKQIFKVHLNKLKLKSVQDID 482
Score = 105 (42.0 bits), Expect = 3.0e-58, Sum P(3) = 3.0e-58
Identities = 45/181 (24%), Positives = 84/181 (46%)
Query: 608 DDVDYLA--VASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDR 665
++++ LA +A++T G GA++AN A+ R+ + T QA + G L++
Sbjct: 499 EEIEKLAGRLAALTPGFAGADIANCCNEGALIAAREDAPAVDTYHFEQAIERVIAG-LEK 557
Query: 666 KER--SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKE 723
K R S E + VA +EA A+ + V+I PR LGY + ++ +
Sbjct: 558 KSRILSPEEKKTVAYHEAGHAICGWFLQYADPLVKVSIIPRGQGALGYAQ----YLPKDQ 613
Query: 724 GMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSA---ARTFVLG-GLSD 779
+ S++ + + L R ++EL T+ + +D+ + A+ +L G+SD
Sbjct: 614 YLTSQEQFKHRMIMTLGGRVSEEL-----HFDTVTSGASDDFKKITQMAQQMILKLGMSD 668
Query: 780 K 780
K
Sbjct: 669 K 669
Score = 45 (20.9 bits), Expect = 3.0e-58, Sum P(3) = 3.0e-58
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 31 FQFCTP--FSCKNQNFNPQNEDRNKNQNS 57
F TP F Q FN N D K+ N+
Sbjct: 29 FSTYTPLAFRTSRQLFNKSNNDNKKSNNN 57
>MGI|MGI:1916847 [details] [associations]
symbol:Afg3l2 "AFG3(ATPase family gene 3)-like 2 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IGI] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0008053 "mitochondrial fusion"
evidence=IGI] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016265 "death" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0021675 "nerve development" evidence=IMP]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IGI] [GO:0040014
"regulation of multicellular organism growth" evidence=IMP]
[GO:0042407 "cristae formation" evidence=IGI] [GO:0042552
"myelination" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048747 "muscle fiber development" evidence=IMP]
[GO:0060013 "righting reflex" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1916847
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
MEROPS:M41.007 EMBL:BC036999 EMBL:BC043056 IPI:IPI00170357
RefSeq:NP_081406.1 UniGene:Mm.426052 ProteinModelPortal:Q8JZQ2
SMR:Q8JZQ2 IntAct:Q8JZQ2 STRING:Q8JZQ2 PhosphoSite:Q8JZQ2
PaxDb:Q8JZQ2 PRIDE:Q8JZQ2 Ensembl:ENSMUST00000025408 GeneID:69597
KEGG:mmu:69597 UCSC:uc008fmf.1 InParanoid:Q8JZQ2 NextBio:329880
Bgee:Q8JZQ2 CleanEx:MM_AFG3L2 Genevestigator:Q8JZQ2
GermOnline:ENSMUSG00000024527 Uniprot:Q8JZQ2
Length = 802
Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
Identities = 148/357 (41%), Positives = 213/357 (59%)
Query: 402 GKGLPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXX 461
G+ + L+ +DVKF DVAG + +LE+ E V F + + Y+ G +
Sbjct: 291 GETTAKVLKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPG 350
Query: 462 XXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDA 521
KTLLAKA AGEA V F ++S S+F+E++VGVG +RVR L+ A+ NAP ++FIDE+DA
Sbjct: 351 TGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDA 410
Query: 522 VGRERGLIKGS-GGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRF 579
VGR+RG +G+ GGQ E++ TLNQLLV +DGF NV+ +A TNRPDILDPAL+RPGRF
Sbjct: 411 VGRKRG--RGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRF 468
Query: 580 DRKIFIPKPGLIGRMEILKVHAR--KKPMADDVDYLA--VASMTDGMVGAELANIVEVAA 635
DR+IFI P + GR I KVH R K A + D LA +AS+T G GA++AN+ AA
Sbjct: 469 DRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNEAA 528
Query: 636 INMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDL 693
+ R I QA + G L++K + E + VA +EA AV
Sbjct: 529 LIAARHLSDAINEKHFEQAIE-RVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHA 587
Query: 694 KNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCG 750
+ V+I PR G+ LGY + ++ ++ + +++ LLD + + L R ++E++ G
Sbjct: 588 DPLLKVSIIPR-GKGLGYAQ----YLPKEQYLYTKEQLLDRMCMTLGGRVSEEIFFG 639
>UNIPROTKB|F1LN92 [details] [associations]
symbol:Afg3l2 "Protein Afg3l2" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016265 "death" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0021675 "nerve development" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1305259
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
IPI:IPI00192903 RefSeq:NP_001128336.1 UniGene:Rn.8386
ProteinModelPortal:F1LN92 PRIDE:F1LN92 Ensembl:ENSRNOT00000024632
GeneID:307350 KEGG:rno:307350 NextBio:657254 ArrayExpress:F1LN92
Uniprot:F1LN92
Length = 802
Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
Identities = 148/357 (41%), Positives = 213/357 (59%)
Query: 402 GKGLPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXX 461
G+ + L+ +DVKF DVAG + +LE+ E V F + + Y+ G +
Sbjct: 291 GETTAKVLKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPG 350
Query: 462 XXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDA 521
KTLLAKA AGEA V F ++S S+F+E++VGVG +RVR L+ A+ NAP ++FIDE+DA
Sbjct: 351 TGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDA 410
Query: 522 VGRERGLIKGS-GGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRF 579
VGR+RG +G+ GGQ E++ TLNQLLV +DGF NV+ +A TNRPDILDPAL+RPGRF
Sbjct: 411 VGRKRG--RGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRF 468
Query: 580 DRKIFIPKPGLIGRMEILKVHAR--KKPMADDVDYLA--VASMTDGMVGAELANIVEVAA 635
DR+IFI P + GR I KVH R K A + D LA +AS+T G GA++AN+ AA
Sbjct: 469 DRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNEAA 528
Query: 636 INMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDL 693
+ R I QA + G L++K + E + VA +EA AV
Sbjct: 529 LIAARHLSDAINEKHFEQAIE-RVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHA 587
Query: 694 KNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCG 750
+ V+I PR G+ LGY + ++ ++ + +++ LLD + + L R ++E++ G
Sbjct: 588 DPLLKVSIIPR-GKGLGYAQ----YLPKEQYLYTKEQLLDRMCMTLGGRVSEEIFFG 639
>TAIR|locus:2163736 [details] [associations]
symbol:FTSH11 "FTSH protease 11" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=TAS] [GO:0009408 "response to heat" evidence=IMP]
[GO:0009644 "response to high light intensity" evidence=IMP]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0019761
"glucosinolate biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0009536
"plastid" evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005743 GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0004222 GO:GO:0009408 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0004176
EMBL:AB025622 HOGENOM:HOG000217276 GO:GO:0010304 EMBL:AY091086
EMBL:AY123027 IPI:IPI00537766 RefSeq:NP_568787.1 UniGene:At.7145
ProteinModelPortal:Q9FGM0 SMR:Q9FGM0 MEROPS:M41.018 PaxDb:Q9FGM0
PRIDE:Q9FGM0 EnsemblPlants:AT5G53170.1 GeneID:835398
KEGG:ath:AT5G53170 GeneFarm:4747 TAIR:At5g53170 InParanoid:Q9FGM0
OMA:DIMPEKN PhylomeDB:Q9FGM0 ProtClustDB:CLSN2690002
Genevestigator:Q9FGM0 Uniprot:Q9FGM0
Length = 806
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 155/392 (39%), Positives = 220/392 (56%)
Query: 393 SGARVRRAYG-KGLPQYLERGVDVK-FSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRX 450
SG +Y K L + + +VK F DV G + ELEE+V++ + + R G +
Sbjct: 335 SGVGSSSSYSPKELNKEITPEKNVKTFKDVKGCDDAKQELEEVVEYLKNPSKFTRLGGKL 394
Query: 451 XXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNA 510
KTLLAKA+AGEAGV FF + S+F E++VGVGA RVRSL+Q AK A
Sbjct: 395 PKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKA 454
Query: 511 PSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILD 570
P ++FIDE+DAVG R +G TL+QLLV +DGFE +I +A+TN PDILD
Sbjct: 455 PCIIFIDEIDAVGSTRKQWEG----HTKKTLHQLLVEMDGFEQNEGIIVMAATNLPDILD 510
Query: 571 PALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANI 630
PAL RPGRFDR I +P P + GR EIL+++ + KPM++DVD A+A T G GA+LAN+
Sbjct: 511 PALTRPGRFDRHIVVPSPDVRGREEILELYLQGKPMSEDVDVKAIARGTPGFNGADLANL 570
Query: 631 VEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVAV 688
V +AAI +G +++++ L A G +RK S ++ + A +E+ A+VA+
Sbjct: 571 VNIAAIKAAVEGAEKLSSEQLEFAKDRIVMGT-ERKTMFVSEDSKKLTAYHESGHAIVAL 629
Query: 689 NFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELW 748
N I TI PR G LG V + E +S++ LL + V + R A+EL
Sbjct: 630 NTKGAHPIHKATIMPR-GSALGMVTQLPSN---DETSVSKRQLLARLDVCMGGRVAEELI 685
Query: 749 CGEGQLSTIWAETADNARSAARTFVLG-GLSD 779
G ++T + A A+ V G+S+
Sbjct: 686 FGLDHITTGASSDLSQATELAQYMVSSCGMSE 717
>UNIPROTKB|E2QYF3 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060013 "righting reflex" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0042407 "cristae
formation" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
EMBL:AAEX03005521 RefSeq:XP_547682.2 ProteinModelPortal:E2QYF3
Ensembl:ENSCAFT00000029872 GeneID:490560 KEGG:cfa:490560
Uniprot:E2QYF3
Length = 806
Score = 595 (214.5 bits), Expect = 6.6e-58, P = 6.6e-58
Identities = 147/357 (41%), Positives = 213/357 (59%)
Query: 402 GKGLPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXX 461
G+ + L+ +DVKF DVAG + +LE+ E V F + + Y+ G +
Sbjct: 293 GETTAKVLKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPG 352
Query: 462 XXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDA 521
KTLLAKA AGEA V F ++S S+F+E++VGVG +RVR L+ A+ NAP ++FIDE+DA
Sbjct: 353 TGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDA 412
Query: 522 VGRERGLIKGS-GGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRF 579
VGR+RG +G+ GGQ E++ TLNQLLV +DGF NV+ +A TNRPDILDPAL+RPGRF
Sbjct: 413 VGRKRG--RGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRF 470
Query: 580 DRKIFIPKPGLIGRMEILKVHAR--KKPMADDVDYLA--VASMTDGMVGAELANIVEVAA 635
DR+IFI P + GR I KVH R K A + + LA +AS+T G GA++AN+ AA
Sbjct: 471 DRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKEKLARKLASLTPGFSGADVANVCNEAA 530
Query: 636 INMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDL 693
+ R I QA + G L++K + E + VA +EA AV
Sbjct: 531 LIAARHLSDSINQKHFEQAIE-RVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHA 589
Query: 694 KNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCG 750
+ V+I PR G+ LGY + ++ ++ + +++ LLD + + L R ++E++ G
Sbjct: 590 DPLLKVSIIPR-GKGLGYAQ----YLPKEQYLYTKEQLLDRMCMTLGGRVSEEIFFG 641
>UNIPROTKB|Q9Y4W6 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9606 "Homo
sapiens" [GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0021675 "nerve
development" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0051082 "unfolded protein binding" evidence=TAS]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0008219 DrugBank:DB00171 GO:GO:0007528 GO:GO:0051082
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 eggNOG:COG0465
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 GO:GO:0021675 GO:GO:0060013 EMBL:Y18314 EMBL:BC065016
IPI:IPI00001091 RefSeq:NP_006787.2 UniGene:Hs.726355 PDB:2LNA
PDBsum:2LNA ProteinModelPortal:Q9Y4W6 SMR:Q9Y4W6 IntAct:Q9Y4W6
MINT:MINT-1161944 STRING:Q9Y4W6 MEROPS:M41.007 PhosphoSite:Q9Y4W6
DMDM:126302516 PaxDb:Q9Y4W6 PeptideAtlas:Q9Y4W6 PRIDE:Q9Y4W6
Ensembl:ENST00000269143 GeneID:10939 KEGG:hsa:10939 UCSC:uc002kqz.2
GeneCards:GC18M012328 H-InvDB:HIX0027367 HGNC:HGNC:315
HPA:HPA004479 HPA:HPA004480 MIM:604581 MIM:610246 MIM:614487
neXtProt:NX_Q9Y4W6 Orphanet:101109 PharmGKB:PA24612
InParanoid:Q9Y4W6 PhylomeDB:Q9Y4W6 GenomeRNAi:10939 NextBio:41551
ArrayExpress:Q9Y4W6 Bgee:Q9Y4W6 CleanEx:HS_AFG3L2
Genevestigator:Q9Y4W6 GermOnline:ENSG00000141385 Uniprot:Q9Y4W6
Length = 797
Score = 595 (214.5 bits), Expect = 6.6e-58, P = 6.6e-58
Identities = 147/357 (41%), Positives = 212/357 (59%)
Query: 402 GKGLPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXX 461
G+ + L+ +DVKF DVAG + +LE+ E V F + + Y+ G +
Sbjct: 292 GETTAKVLKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPG 351
Query: 462 XXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDA 521
KTLLAKA AGEA V F ++S S+F+E++VGVG +RVR L+ A+ NAP ++FIDE+DA
Sbjct: 352 TGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDA 411
Query: 522 VGRERGLIKGS-GGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRF 579
VGR+RG +G+ GGQ E++ TLNQLLV +DGF NV+ +A TNRPDILDPAL+RPGRF
Sbjct: 412 VGRKRG--RGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRF 469
Query: 580 DRKIFIPKPGLIGRMEILKVHAR--KKPMADDVDYLA--VASMTDGMVGAELANIVEVAA 635
DR+IFI P + GR I KVH R K + D LA +AS+T G GA++AN+ AA
Sbjct: 470 DRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVCNEAA 529
Query: 636 INMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDL 693
+ R I QA + G L++K + E + VA +EA AV
Sbjct: 530 LIAARHLSDSINQKHFEQAIE-RVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHA 588
Query: 694 KNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCG 750
+ V+I PR G+ LGY + ++ ++ + +++ LLD + + L R ++E++ G
Sbjct: 589 DPLLKVSIIPR-GKGLGYAQ----YLPKEQYLYTKEQLLDRMCMTLGGRVSEEIFFG 640
>ASPGD|ASPL0000072959 [details] [associations]
symbol:AN4557 species:162425 "Emericella nidulans"
[GO:0097002 "mitochondrial inner boundary membrane" evidence=IEA]
[GO:0005745 "m-AAA complex" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006461 "protein
complex assembly" evidence=IEA] [GO:0006465 "signal peptide
processing" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:LYRFVTT MEROPS:M41.002 OrthoDB:EOG4J14HG
EMBL:BN001303 EMBL:AACD01000078 RefSeq:XP_662161.1
ProteinModelPortal:Q5B4H3 SMR:Q5B4H3 STRING:Q5B4H3
EnsemblFungi:CADANIAT00005881 GeneID:2872358 KEGG:ani:AN4557.2
Uniprot:Q5B4H3
Length = 883
Score = 598 (215.6 bits), Expect = 6.8e-58, P = 6.8e-58
Identities = 135/344 (39%), Positives = 202/344 (58%)
Query: 410 ERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAK 469
E V +KFSDVAG+ + ++E+ E V F E +++ G + KTLLAK
Sbjct: 394 ETDVKIKFSDVAGMDEAKVEIMEFVSFLKSPERFQKLGAKIPRGAILSGPPGTGKTLLAK 453
Query: 470 AVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLI 529
A AGE+GV FFS+S S+FVE++VGVG SRVR L+ A+ N P ++FIDE+DA+G+ R
Sbjct: 454 ATAGESGVPFFSVSGSEFVEMFVGVGPSRVRDLFANARKNTPCIIFIDEIDAIGKSRSAK 513
Query: 530 KGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKP 588
SGG ER++TLNQ+L +DGF V+ +A TNRPD+LD AL+RPGRFDR I I +P
Sbjct: 514 NFSGGNDERESTLNQILTEMDGFNTSDQVVVLAGTNRPDVLDKALMRPGRFDRHISIDRP 573
Query: 589 GLIGRMEILKVHARKKPMADDVDYLA--VASMTDGMVGAELANIVEVAAINMMRDGRTEI 646
+ GR +I +VH +K +D+DYL ++++T G GA++AN V AA+ R+ +
Sbjct: 574 TMDGRKQIFRVHLKKIVTKEDMDYLTGRLSALTPGFAGADIANCVNEAALVAARENAESV 633
Query: 647 TTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPR 704
T +A + G L++K S E R VA +EA A+ F + V+I PR
Sbjct: 634 TMKHFERAIE-RVVGGLEKKSLVLSPEEKRTVAYHEAGHAICGWYFRWADPLLKVSIIPR 692
Query: 705 AGRELGYVR-MKMDHMKFKEGMLSRQSLLDHITVQLAPRAADEL 747
LGY + + + + +++ ++D + + L R ++EL
Sbjct: 693 GQGALGYAQYLPANGDTY---LMTANQMMDRMAMTLGGRVSEEL 733
>UNIPROTKB|Q2KJI7 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9913 "Bos
taurus" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0046872 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 MEROPS:M41.016
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:BC105322 IPI:IPI00686580 RefSeq:NP_001039676.1 UniGene:Bt.1657
HSSP:Q9WZ49 ProteinModelPortal:Q2KJI7 SMR:Q2KJI7 STRING:Q2KJI7
PRIDE:Q2KJI7 Ensembl:ENSBTAT00000031029 GeneID:515757
KEGG:bta:515757 CTD:10939 InParanoid:Q2KJI7 OMA:LYRFVTT
NextBio:20871990 GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
Uniprot:Q2KJI7
Length = 805
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 147/357 (41%), Positives = 212/357 (59%)
Query: 402 GKGLPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXX 461
G+ + L+ +DVKF DVAG + +LE+ E V F + + Y+ G +
Sbjct: 293 GETTAKVLKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPG 352
Query: 462 XXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDA 521
KTLLAKA AGEA V F ++S S+F+E++VGVG +RVR L+ A+ NAP ++FIDE+DA
Sbjct: 353 TGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDA 412
Query: 522 VGRERGLIKGS-GGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRF 579
VGR+RG +G+ GGQ E++ TLNQLLV +DGF NV+ +A TNRPDILDPAL+RPGRF
Sbjct: 413 VGRKRG--RGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRF 470
Query: 580 DRKIFIPKPGLIGRMEILKVHAR--KKPMADDVDYLA--VASMTDGMVGAELANIVEVAA 635
DR+IFI P + GR I KVH R K + + LA +AS+T G GA++AN+ AA
Sbjct: 471 DRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKEKLARKLASLTPGFSGADVANVCNEAA 530
Query: 636 INMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDL 693
+ R I QA + G L++K + E + VA +EA AV
Sbjct: 531 LIAARHLSDSINQKHFEQAIE-RVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHA 589
Query: 694 KNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCG 750
+ V+I PR G+ LGY + ++ ++ + +R+ LLD + + L R ++E++ G
Sbjct: 590 DPLLKVSIIPR-GKGLGYAQ----YLPREQYLYTREQLLDRMCMTLGGRVSEEIFFG 641
>UNIPROTKB|E1BZ74 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0016265 "death" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0042407 "cristae formation" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0060013 "righting
reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0008270 GO:GO:0006508
GO:GO:0040014 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 GO:GO:0016265
GO:GO:0060013 EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00603273 Ensembl:ENSGALT00000022474 ArrayExpress:E1BZ74
Uniprot:E1BZ74
Length = 805
Score = 588 (212.0 bits), Expect = 3.6e-57, P = 3.6e-57
Identities = 145/357 (40%), Positives = 211/357 (59%)
Query: 402 GKGLPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXX 461
G+ + L+ +DVKF DVAG + +LE+ E V F + + Y G +
Sbjct: 292 GETTAKVLKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYEDLGAKIPKGAILTGPPG 351
Query: 462 XXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDA 521
KTLLAKA AGEA V F +++ S+F+E++VGVG +RVR L+ A+ NAP ++FIDE+DA
Sbjct: 352 TGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDA 411
Query: 522 VGRERGLIKGS-GGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRF 579
VGR+RG +G+ GGQ E++ TLNQLLV +DGF NV+ +A TNRPDILDPAL+RPGRF
Sbjct: 412 VGRKRG--RGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRF 469
Query: 580 DRKIFIPKPGLIGRMEILKVHAR--KKPMADDVDYLA--VASMTDGMVGAELANIVEVAA 635
DR+I+I P + GR I KVH R K D D LA +AS+T G GA++AN+ AA
Sbjct: 470 DRQIYIGPPDIKGRASIFKVHLRPLKLDTVLDKDNLARKLASLTPGFSGADIANVCNEAA 529
Query: 636 INMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDL 693
+ R I QA + G L++K + E + VA +EA AV
Sbjct: 530 LIAARHLSDAINQKHFEQAIE-RVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWFLEHA 588
Query: 694 KNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCG 750
+ V+I PR G+ LGY + ++ ++ + +++ LLD + + L R +++++ G
Sbjct: 589 DPLLKVSIIPR-GKGLGYAQ----YLPKEQYLYTKEQLLDRMCMTLGGRVSEQIFFG 640
>UNIPROTKB|F1N9N5 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
OMA:LYRFVTT EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00683486 Ensembl:ENSGALT00000016639 ArrayExpress:F1N9N5
Uniprot:F1N9N5
Length = 635
Score = 588 (212.0 bits), Expect = 3.6e-57, P = 3.6e-57
Identities = 145/357 (40%), Positives = 211/357 (59%)
Query: 402 GKGLPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXX 461
G+ + L+ +DVKF DVAG + +LE+ E V F + + Y G +
Sbjct: 136 GETTAKVLKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYEDLGAKIPKGAILTGPPG 195
Query: 462 XXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDA 521
KTLLAKA AGEA V F +++ S+F+E++VGVG +RVR L+ A+ NAP ++FIDE+DA
Sbjct: 196 TGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDA 255
Query: 522 VGRERGLIKGS-GGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRF 579
VGR+RG +G+ GGQ E++ TLNQLLV +DGF NV+ +A TNRPDILDPAL+RPGRF
Sbjct: 256 VGRKRG--RGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRF 313
Query: 580 DRKIFIPKPGLIGRMEILKVHAR--KKPMADDVDYLA--VASMTDGMVGAELANIVEVAA 635
DR+I+I P + GR I KVH R K D D LA +AS+T G GA++AN+ AA
Sbjct: 314 DRQIYIGPPDIKGRASIFKVHLRPLKLDTVLDKDNLARKLASLTPGFSGADIANVCNEAA 373
Query: 636 INMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDL 693
+ R I QA + G L++K + E + VA +EA AV
Sbjct: 374 LIAARHLSDAINQKHFEQAIE-RVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWFLEHA 432
Query: 694 KNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCG 750
+ V+I PR G+ LGY + ++ ++ + +++ LLD + + L R +++++ G
Sbjct: 433 DPLLKVSIIPR-GKGLGYAQ----YLPKEQYLYTKEQLLDRMCMTLGGRVSEQIFFG 484
>ZFIN|ZDB-GENE-070912-46 [details] [associations]
symbol:afg3l2 "AFG3 ATPase family gene 3-like 2 (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-070912-46 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:10939 MEROPS:M41.007 EMBL:BX000484 EMBL:BC155655
IPI:IPI00513225 RefSeq:NP_001104667.1 UniGene:Dr.82691 SMR:A9JRG9
STRING:A9JRG9 Ensembl:ENSDART00000089834 GeneID:569168
KEGG:dre:569168 NextBio:20889547 Uniprot:A9JRG9
Length = 800
Score = 582 (209.9 bits), Expect = 1.6e-56, P = 1.6e-56
Identities = 140/346 (40%), Positives = 207/346 (59%)
Query: 413 VDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
+DVKF DVAG + +LE+ E V F + + Y+ G + KTLLAKA A
Sbjct: 298 IDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATA 357
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
GEA V F +++ S+F+E++VGVG +RVR L+ A+ NAP ++FIDE+DAVGR+RG +G+
Sbjct: 358 GEANVPFITVNGSEFLEMFVGVGPARVRDLFVLARKNAPCILFIDEIDAVGRKRG--RGN 415
Query: 533 -GGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGL 590
GGQ E++ TLNQLLV +DGF NV+ +A TNRPDILDPAL+RPGRFDR+I+I P +
Sbjct: 416 FGGQSEQENTLNQLLVEMDGFNTATNVVVLAGTNRPDILDPALMRPGRFDRQIYIGPPDI 475
Query: 591 IGRMEILKVHARKKPMADDVDYLAVA----SMTDGMVGAELANIVEVAAINMMRDGRTEI 646
GR I KVH R + ++D A+A ++T G GA++AN+ AA+ R I
Sbjct: 476 KGRASIFKVHLRPLKLEAELDKEALARKMAALTPGFSGADIANVCNEAALIAARHLSDAI 535
Query: 647 TTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPR 704
QA + G L++K + E + VA +EA AV + V+I PR
Sbjct: 536 NQKHFEQAIE-RVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWFLEHADPLLKVSIIPR 594
Query: 705 AGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCG 750
G+ LGY + ++ ++ + +++ LLD + + L R ++E++ G
Sbjct: 595 -GKGLGYAQ----YLPKEQYLYTKEQLLDRMCMTLGGRVSEEIFFG 635
>TAIR|locus:2025052 [details] [associations]
symbol:ftsh10 "FTSH protease 10" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009536
"plastid" evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
EMBL:AC022464 ProtClustDB:CLSN2692039 EMBL:AY064138 EMBL:AY124808
EMBL:AK230173 IPI:IPI00520253 PIR:H86209 RefSeq:NP_172231.2
UniGene:At.23339 ProteinModelPortal:Q8VZI8 SMR:Q8VZI8 STRING:Q8VZI8
MEROPS:M41.023 PaxDb:Q8VZI8 PRIDE:Q8VZI8 EnsemblPlants:AT1G07510.1
GeneID:837265 KEGG:ath:AT1G07510 GeneFarm:2535 GeneFarm:2675
TAIR:At1g07510 InParanoid:Q8VZI8 OMA:YSEDTAM PhylomeDB:Q8VZI8
Genevestigator:Q8VZI8 Uniprot:Q8VZI8
Length = 813
Score = 562 (202.9 bits), Expect = 2.0e-56, Sum P(2) = 2.0e-56
Identities = 146/381 (38%), Positives = 215/381 (56%)
Query: 415 VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGE 474
+ F DVAG + + E+ E V F + + Y G + KTLLAKA AGE
Sbjct: 324 IYFKDVAGCEEAKQEIMEFVHFLQNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGE 383
Query: 475 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 534
+ V F SIS S F+E++VGVG SRVR+L+QEA+ APS++FIDE+DA+GR RG SGG
Sbjct: 384 SAVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDAIGRARGRGGFSGG 443
Query: 535 Q-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 593
ER++TLNQLLV +DGF V+ +A TNRPDILD AL+RPGRFDR+I I KP + GR
Sbjct: 444 NDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGR 503
Query: 594 MEILKVHARKKPMADDVDYLA--VASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDL 651
+I +++ +K + + Y + +A++T G GA++AN+ AA+ R +T
Sbjct: 504 DQIFQIYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARHEGATVTMAHF 563
Query: 652 LQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGREL 709
A G L++K R S R VA +E+ AV + + VTI PR L
Sbjct: 564 DSAID-RVIGGLEKKNRVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAAL 622
Query: 710 GYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAA 769
G+ + ++ + +++++ L D + L RAA+++ G ++ST A+ D +
Sbjct: 623 GFAQ----YVPNENLLMTKEQLFDMTCMTLGGRAAEQVLIG--RIST-GAQN-DLEKVTK 674
Query: 770 RTFV---LGGLSDKHFGLSNF 787
T+ + G SDK GL +F
Sbjct: 675 MTYAQVAVYGFSDK-IGLLSF 694
Score = 40 (19.1 bits), Expect = 2.0e-56, Sum P(2) = 2.0e-56
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 38 SCKNQNFNPQNEDRNKNQNSKRPHLGLLTIPVTLTIISTSLAQ 80
S KN+N N + N+ QN P + + I T ++ S Q
Sbjct: 120 SKKNENENAGDAFSNEYQNMLIPLMAIALILSTFSLGSREQQQ 162
>DICTYBASE|DDB_G0272120 [details] [associations]
symbol:rcaA "peptidase M41, FtsH domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0272120 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GenomeReviews:CM000151_GR GO:GO:0004222
EMBL:AAFI02000008 GO:GO:0030163 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 ProtClustDB:CLSZ2846729 RefSeq:XP_645267.1
ProteinModelPortal:Q75JS8 SMR:Q75JS8 STRING:Q75JS8
EnsemblProtists:DDB0185211 GeneID:8618433 KEGG:ddi:DDB_G0272120
InParanoid:Q75JS8 OMA:ERTIVAH Uniprot:Q75JS8
Length = 844
Score = 582 (209.9 bits), Expect = 2.6e-56, P = 2.6e-56
Identities = 145/376 (38%), Positives = 208/376 (55%)
Query: 417 FSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAG 476
F DVAG+ + + E+ E V F Y++ G R KTLLAKA AGEAG
Sbjct: 353 FKDVAGMDEAKEEIMEFVSFLKDPSRYKKLGARIPKGAILSGPPGTGKTLLAKATAGEAG 412
Query: 477 VNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQE 536
VNF++IS S F+E++VGVG SRVR L++EA+ N P +VFIDE+DAVGR R G E
Sbjct: 413 VNFYTISGSDFIEMFVGVGPSRVRDLFKEARANTPCIVFIDEIDAVGRARSR-GGFHNDE 471
Query: 537 RDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEI 596
R+ TLNQLLV +DGF V+ A TNR D+LDPAL+RPGRFDR+I++ KP + GR +I
Sbjct: 472 RENTLNQLLVEMDGFSSTSGVVVFAGTNRSDVLDPALLRPGRFDRQIYVGKPDIKGRKDI 531
Query: 597 LKVHARKKPMADDVDYLA--VASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 654
VH + + +++ +A +A++T G GA++AN+ A+ R T D +A
Sbjct: 532 FMVHLKNIKLDGEMEEIAKKLATLTPGFSGADIANVCNEGALVAARKDATSANFDHFEEA 591
Query: 655 AQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYV 712
+ G L R+ R S E VA +EA AVV + V+I PR LG+
Sbjct: 592 IERVLVG-LKRENRVLSPEERTIVAHHEAGHAVVGWFLEHTDPLLKVSIVPRGSGTLGFA 650
Query: 713 RMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTF 772
+ + + + +R+ L D I V L R A+ + ++ST + D A
Sbjct: 651 Q----YQPKDQYLYTREQLFDRICVSLGGRIAESIIFD--RISTGAMDDLDKVTKMASAS 704
Query: 773 VLG-GLSDKHFGLSNF 787
V+ G+S+K G+++F
Sbjct: 705 VVNYGMSEK-VGVASF 719
>RGD|1309722 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=ISO] [GO:0008053 "mitochondrial fusion"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=ISO] [GO:0042407
"cristae formation" evidence=ISO] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1309722
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
IPI:IPI00365343 Ensembl:ENSRNOT00000065957 UCSC:RGD:1309722
ArrayExpress:F1LS61 Uniprot:F1LS61
Length = 761
Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
Identities = 144/388 (37%), Positives = 226/388 (58%)
Query: 402 GKGLPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXX 461
G+ + L+ +DV+F+DVAG + +LE+ E V F + + Y+ G +
Sbjct: 256 GETTAKILKNNIDVRFADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAMLTGPPG 315
Query: 462 XXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDA 521
KTLLAKA AGEA V F +++ S+F+E++VGVG +RVR ++ A+ +AP ++FIDE+DA
Sbjct: 316 TGKTLLAKATAGEAKVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILFIDEIDA 375
Query: 522 VGRERGLIKGS-GGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRF 579
+GR+RG +G GGQ E++ TLNQ+LV +DGF NV+ +A TNRPDILDPAL RPGRF
Sbjct: 376 IGRKRG--RGHLGGQSEQENTLNQMLVEMDGFNSTTNVVVLAGTNRPDILDPALTRPGRF 433
Query: 580 DRKIFIPKPGLIGRMEILKVHARKKPMADDV--DYLA--VASMTDGMVGAELANIVEVAA 635
DR+I+I P + GR I KVH R + + + D L+ +A++T G GA+++N+ AA
Sbjct: 434 DRQIYIGPPDIKGRSSIFKVHLRPLKLDESLTRDALSRKLAALTPGFTGADISNVCNEAA 493
Query: 636 INMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQ--VAINEAAMAVVAVNFPDL 693
+ R + QA + G L++K + + + VA +EA AVV
Sbjct: 494 LIAARHLSPSVQERHFEQAIE-RVIGGLEKKTQVLQPSEKTTVAYHEAGHAVVGWFLEHA 552
Query: 694 KNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQ 753
+ V+I PR G+ LGY + ++ ++ + +R+ L D + + L R A++L+ G Q
Sbjct: 553 DPLLKVSIIPR-GKGLGYAQ----YLPREQYLYTREQLFDRMCMMLGGRVAEQLFFG--Q 605
Query: 754 LST-IWAETADNARSAARTFVLGGLSDK 780
++T + +SA V G+S+K
Sbjct: 606 ITTGAQDDLRKVTQSAYAQIVQFGMSEK 633
>MGI|MGI:1928277 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=ISA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IGI] [GO:0008053 "mitochondrial fusion" evidence=IGI]
[GO:0008152 "metabolic process" evidence=ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IGI] [GO:0042407 "cristae formation" evidence=IGI]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1928277
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0031966
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 EMBL:AK012394 EMBL:AK159647 EMBL:AK167964
EMBL:AK168244 EMBL:BC056978 EMBL:AF329695 IPI:IPI00468514
IPI:IPI00652659 RefSeq:NP_473411.2 UniGene:Mm.287475
ProteinModelPortal:Q920A7 SMR:Q920A7 IntAct:Q920A7 STRING:Q920A7
MEROPS:M41.016 PhosphoSite:Q920A7 PaxDb:Q920A7 PRIDE:Q920A7
Ensembl:ENSMUST00000001520 Ensembl:ENSMUST00000098320 GeneID:114896
KEGG:mmu:114896 UCSC:uc009nwd.2 CTD:114896 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 InParanoid:Q920A7 KO:K08956 OMA:WDEKDFR
OrthoDB:EOG4SBDXC NextBio:368917 Bgee:Q920A7 CleanEx:MM_AFG3L1
Genevestigator:Q920A7 GermOnline:ENSMUSG00000031967 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
Uniprot:Q920A7
Length = 789
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 144/388 (37%), Positives = 225/388 (57%)
Query: 402 GKGLPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXX 461
G+ + L+ +DV+F+DVAG + +LE+ E V F + + Y+ G +
Sbjct: 284 GETTAKILKNNIDVRFADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAMLTGPPG 343
Query: 462 XXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDA 521
KTLLAKA AGEA V F +++ S+F+E++VGVG +RVR ++ A+ +AP ++FIDE+DA
Sbjct: 344 TGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILFIDEIDA 403
Query: 522 VGRERGLIKGS-GGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRF 579
+GR+RG +G GGQ E++ TLNQ+LV +DGF NV+ +A TNRPDILDPAL RPGRF
Sbjct: 404 IGRKRG--RGHLGGQSEQENTLNQMLVEMDGFNSSTNVVVLAGTNRPDILDPALTRPGRF 461
Query: 580 DRKIFIPKPGLIGRMEILKVHARKKPMADDV--DYLA--VASMTDGMVGAELANIVEVAA 635
DR+I+I P + GR I KVH R + + D L+ +A++T G GA+++N+ AA
Sbjct: 462 DRQIYIGPPDIKGRSSIFKVHLRPLKLDGSLSKDALSRKLAALTPGFTGADISNVCNEAA 521
Query: 636 INMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQ--VAINEAAMAVVAVNFPDL 693
+ R + QA + G L++K + + + VA +EA AVV
Sbjct: 522 LIAARHLSPSVQERHFEQAIE-RVIGGLEKKTQVLQPSEKTTVAYHEAGHAVVGWFLEHA 580
Query: 694 KNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQ 753
+ V+I PR G+ LGY + ++ ++ + +R+ L D + + L R A++L+ G Q
Sbjct: 581 DPLLKVSIIPR-GKGLGYAQ----YLPREQFLYTREQLFDRMCMMLGGRVAEQLFFG--Q 633
Query: 754 LST-IWAETADNARSAARTFVLGGLSDK 780
++T + +SA V G+S+K
Sbjct: 634 ITTGAQDDLRKVTQSAYAQIVQFGMSEK 661
>TAIR|locus:2066128 [details] [associations]
symbol:ftsh3 "FTSH protease 3" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 EMBL:AC005315 GO:GO:0030163 eggNOG:COG0465
HOGENOM:HOG000217277 KO:K08956 OMA:WDEKDFR TIGRFAMs:TIGR01241
HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0004176 EMBL:BT002743 EMBL:AY063914
EMBL:AK226271 IPI:IPI00525466 PIR:T02738 RefSeq:NP_850129.1
UniGene:At.24335 ProteinModelPortal:Q84WU8 SMR:Q84WU8
MEROPS:M41.022 PaxDb:Q84WU8 PRIDE:Q84WU8 EnsemblPlants:AT2G29080.1
GeneID:817456 KEGG:ath:AT2G29080 GeneFarm:2506 TAIR:At2g29080
InParanoid:Q84WU8 PhylomeDB:Q84WU8 ProtClustDB:CLSN2692039
Genevestigator:Q84WU8 Uniprot:Q84WU8
Length = 809
Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
Identities = 147/380 (38%), Positives = 216/380 (56%)
Query: 415 VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGE 474
+ F DVAG + + E+ E V F + + Y G + KTLLAKA AGE
Sbjct: 319 IYFKDVAGCDEAKQEIMEFVHFLKNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGE 378
Query: 475 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 534
+GV F SIS S F+E++VGVG SRVR L+QEA+ APS++FIDE+DA+GR RG G
Sbjct: 379 SGVPFLSISGSDFMEMFVGVGPSRVRHLFQEARQAAPSIIFIDEIDAIGRARGRGGLGGN 438
Query: 535 QERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRM 594
ER++TLNQLLV +DGF V+ +A TNRPDILD AL+RPGRFDR+I I KP + GR
Sbjct: 439 DERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 498
Query: 595 EILKVHARKKPMADDVDYLA--VASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLL 652
+I K++ +K + + Y + +A++T G GA++AN+ AA+ R +T
Sbjct: 499 QIFKIYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARHEGATVTMAHF- 557
Query: 653 QAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELG 710
++A G L++K R S R VA +E+ AVV + + VTI PR LG
Sbjct: 558 ESAIDRVIGGLEKKNRVISKLERRTVAYHESGHAVVGWFLEHAEPLLKVTIVPRGTAALG 617
Query: 711 YVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAAR 770
+ + ++ + +++++ L D + L RAA+++ G+ +ST A+ D +
Sbjct: 618 FAQ----YVPNENLLMTKEQLFDMTCMTLGGRAAEQVLIGK--IST-GAQN-DLEKVTKM 669
Query: 771 TFV---LGGLSDKHFGLSNF 787
T+ + G SDK GL +F
Sbjct: 670 TYAQVAVYGFSDK-VGLLSF 688
>SGD|S000004695 [details] [associations]
symbol:YTA12 "Component of the mitochondrial inner membrane
m-AAA protease" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS;IDA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0006508 "proteolysis" evidence=IEA;IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;IDA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA;IMP] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006461 "protein complex assembly" evidence=IMP]
[GO:0006465 "signal peptide processing" evidence=IMP] [GO:0005745
"m-AAA complex" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0031966 "mitochondrial membrane" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 SGD:S000004695 EMBL:U09358 GO:GO:0005524
GO:GO:0006461 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0008237 GO:GO:0004222 GO:GO:0016887 EMBL:BK006946
GO:GO:0030163 EMBL:Z49259 eggNOG:COG0465
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0097002 GO:GO:0045041
GO:GO:0006465 EMBL:X81068 EMBL:AY693099 PIR:S54465
RefSeq:NP_013807.1 ProteinModelPortal:P40341 SMR:P40341
DIP:DIP-889N IntAct:P40341 MINT:MINT-596896 STRING:P40341
MEROPS:M41.003 PaxDb:P40341 PeptideAtlas:P40341
EnsemblFungi:YMR089C GeneID:855114 KEGG:sce:YMR089C CYGD:YMR089c
OMA:NFSGAND NextBio:978455 Genevestigator:P40341 GermOnline:YMR089C
Uniprot:P40341
Length = 825
Score = 576 (207.8 bits), Expect = 8.9e-56, P = 8.9e-56
Identities = 151/392 (38%), Positives = 216/392 (55%)
Query: 410 ERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAK 469
E V +KF DVAG + + E+ E V F Y + G + KTLLAK
Sbjct: 340 ETDVKIKFKDVAGCDEAKEEIMEFVSFLKEPSRYEKMGAKIPRGAILSGPPGTGKTLLAK 399
Query: 470 AVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG--RERG 527
A AGEAGV F+ +S S+FVE++VGVGA+RVR L++ A++NAPS+VFIDE+DA+G R++G
Sbjct: 400 ATAGEAGVPFYFVSGSEFVEMFVGVGAARVRDLFKTARENAPSIVFIDEIDAIGKARQKG 459
Query: 528 LIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPK 587
G+ ER+ TLNQ+LV +DGF +V+ +A TNRPDILD AL+RPGRFDR I I K
Sbjct: 460 NFSGAN-DERENTLNQMLVEMDGFTPADHVVVLAGTNRPDILDKALLRPGRFDRHINIDK 518
Query: 588 PGLIGRMEILKVHARKKPMADDVDYLA--VASMTDGMVGAELANIVEVAAINMMRDGRTE 645
P L GR I VH +A ++ L +A++T G GA++AN+ AA+ R
Sbjct: 519 PELEGRKAIFAVHLHHLKLAGEIFDLKNRLAALTPGFSGADIANVCNEAALIAARSDEDA 578
Query: 646 ITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAP 703
+ + QA + G ++RK + S E + VA +EA AV + V+I P
Sbjct: 579 VKLNHFEQAIE-RVIGGVERKSKLLSPEEKKVVAYHEAGHAVCGWYLKYADPLLKVSIIP 637
Query: 704 RAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETAD 763
R LGY + + F +L+ Q L D +T+ L R ++EL ++ + +D
Sbjct: 638 RGQGALGYAQYLPGDI-F---LLTEQQLKDRMTMSLGGRVSEEL-----HFPSVTSGASD 688
Query: 764 NAR---SAARTFVLG-GLSDKHFGLSNFWVAD 791
+ + S A V G+SDK G N+ D
Sbjct: 689 DFKKVTSMATAMVTELGMSDK-IGWVNYQKRD 719
>WB|WBGene00004978 [details] [associations]
symbol:spg-7 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008340 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0008270 GO:GO:0006508
GO:GO:0000003 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0030968
EMBL:FO081580 HSSP:Q9LCZ4 RefSeq:NP_491165.2
ProteinModelPortal:Q9N3T5 SMR:Q9N3T5 STRING:Q9N3T5 MEROPS:M41.A10
PaxDb:Q9N3T5 EnsemblMetazoa:Y47G6A.10 GeneID:171915
KEGG:cel:CELE_Y47G6A.10 UCSC:Y47G6A.10 CTD:171915
WormBase:Y47G6A.10 InParanoid:Q9N3T5 NextBio:873225 Uniprot:Q9N3T5
Length = 782
Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
Identities = 143/388 (36%), Positives = 223/388 (57%)
Query: 401 YGKGLPQYLER-GVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXX 459
+G+ + + R + VKF+DVAG + ++E+ E V F + + Y+ G +
Sbjct: 275 FGQSTARVINREDIKVKFADVAGCEEAKIEIMEFVNFLKNPQQYKDLGAKIPKGAILTGP 334
Query: 460 XXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDEL 519
KTLLAKA AGEA V F ++S S+F+E++VGVG +RVR ++ A+ N+P ++FIDE+
Sbjct: 335 PGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDMFSMARKNSPCILFIDEI 394
Query: 520 DAVGRERGLIKGSGGQ-ERDATLNQLLVCLDGFE-GRGNVITIASTNRPDILDPALVRPG 577
DAVGR+RG G GG E++ TLNQLLV +DGF +VI IA+TNR DILD AL+RPG
Sbjct: 395 DAVGRKRGGKGGMGGHSEQENTLNQLLVEMDGFTTDESSVIVIAATNRVDILDSALLRPG 454
Query: 578 RFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLA--VASMTDGMVGAELANIVEVAA 635
RFDR+I++P P + GR I +VH + D L+ +A+ T G GA+++N+ AA
Sbjct: 455 RFDRQIYVPVPDIKGRASIFRVHLGPLRTSLDKTVLSRKLAAHTPGFSGADISNVCNEAA 514
Query: 636 INMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDL 693
+ RD EI+ QA + GM ++K + E + VA +EA A+
Sbjct: 515 LIAARDANHEISNKHFEQAIERVVAGM-EKKTQVLQKEEKKTVAYHEAGHAIAGWFLQHA 573
Query: 694 KNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQ 753
+ V+I PR G+ LGY + ++ ++ + S+ LLD + + L R A+E++ G +
Sbjct: 574 DPLLKVSIIPR-GKGLGYAQ----YLPKEQYLYSKDQLLDRMCMTLGGRVAEEIFFG--R 626
Query: 754 LSTIWAETADNARSAARTFVLG-GLSDK 780
++T + A + V+ G+S+K
Sbjct: 627 ITTGAQDDLQKVTQMAYSQVVKFGMSEK 654
>UNIPROTKB|E1BFQ0 [details] [associations]
symbol:E1BFQ0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042407 "cristae formation" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 OMA:WDEKDFR GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:DAAA02046282 IPI:IPI00707325 Ensembl:ENSBTAT00000056979
Uniprot:E1BFQ0
Length = 802
Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
Identities = 146/400 (36%), Positives = 230/400 (57%)
Query: 394 GARVRRAYGKG--LPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXX 451
G R R +G G + + ++ + V+F+DVAG + +LE+ E V F + + Y+ G +
Sbjct: 277 GGRGGRLFGIGETIAKIIKDDIGVRFADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIP 336
Query: 452 XXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAP 511
KTLLAKA AGEAGV F +++ S+F+E++VGVG +RVR ++ A+ NAP
Sbjct: 337 KGALLTGPPGTGKTLLAKATAGEAGVPFITVNGSEFLEMFVGVGPARVRDMFALARKNAP 396
Query: 512 SVVFIDELDAVGRERGLIKGS-GGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDIL 569
++F+DE+DA+GR+RG +G GGQ E++ TLNQLLV +DGF NV+ +A TNRPD+L
Sbjct: 397 CILFVDEIDAIGRKRG--RGHFGGQSEQENTLNQLLVEMDGFNSTTNVVVLAGTNRPDVL 454
Query: 570 DPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDV--DYLA--VASMTDGMVG- 624
DPAL+RPGRFDR+I+I P + GR I +VH R + + + D LA +A++T G G
Sbjct: 455 DPALMRPGRFDRQIYIGPPDIKGRSSIFRVHLRPLKLDESLSKDALARKLAALTPGFTGS 514
Query: 625 -AELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQ--VAINEA 681
A+++N+ AA+ R + QA + G L++K + + + VA +EA
Sbjct: 515 GADISNVCNEAALIAARHLNPSVGEKHFEQAIE-RVIGGLEKKTQVLQPGEKMTVAYHEA 573
Query: 682 AMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAP 741
AVV + V+I PR G+ LGY + + ++ + +R+ L D + L
Sbjct: 574 GHAVVGWFLEHADPLLKVSIVPR-GKGLGYAQC----LPREQYLYTREQLFDRMCAMLGG 628
Query: 742 RAADELWCGEGQLST-IWAETADNARSAARTFVLGGLSDK 780
R A++L+ G +++T + +SA V G+S+K
Sbjct: 629 RVAEQLFFG--RVTTGAQDDLRKVTQSAYAQIVQFGMSEK 666
>TAIR|locus:2076929 [details] [associations]
symbol:AT3G02450 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR011546 Pfam:PF00004 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:AC021640
EMBL:CP002686 GO:GO:0051301 GO:GO:0008270 GO:GO:0009941
GO:GO:0004222 GO:GO:0017111 HSSP:Q9LCZ4 EMBL:AY062811 EMBL:BT008384
IPI:IPI00524458 RefSeq:NP_186894.1 UniGene:At.27477
ProteinModelPortal:Q9M895 SMR:Q9M895 STRING:Q9M895 PRIDE:Q9M895
EnsemblPlants:AT3G02450.1 GeneID:821139 KEGG:ath:AT3G02450
InParanoid:Q9M895 OMA:SRRIYYN ProtClustDB:CLSN2685201
Genevestigator:Q9M895 Uniprot:Q9M895
Length = 622
Score = 551 (199.0 bits), Expect = 2.0e-55, Sum P(2) = 2.0e-55
Identities = 121/256 (47%), Positives = 162/256 (63%)
Query: 415 VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGE 474
V F DV G+ + EL EIV Y++ G R KTLLA+AVAGE
Sbjct: 331 VGFDDVEGVDSAKDELVEIVSCLQGSINYKKLGARLPRGVLLVGPPGTGKTLLARAVAGE 390
Query: 475 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 534
AGV FFS+SAS+FVE++VG GA+R+R L+ A+ N+PS++FIDELDAVG +RG S
Sbjct: 391 AGVPFFSVSASEFVELFVGRGAARIRDLFNAARKNSPSIIFIDELDAVGGKRGR---SFN 447
Query: 535 QERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRM 594
ERD TLNQLL +DGFE VI IA+TNRP+ LD AL RPGRF RK+ + +P GR
Sbjct: 448 DERDQTLNQLLTEMDGFESDTKVIVIAATNRPEALDSALCRPGRFSRKVLVAEPDQEGRR 507
Query: 595 EILKVHARKKPMADDVDYLA--VASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLL 652
+IL +H R P+ +D + VAS+T G VGA+LANIV AA+ R G + +D++
Sbjct: 508 KILAIHLRDVPLEEDAFLICDLVASLTPGFVGADLANIVNEAALLAARRGGEAVAREDIM 567
Query: 653 QAAQIEERGMLDRKER 668
+A + + G+ D++ R
Sbjct: 568 EAIERAKFGINDKEAR 583
Score = 38 (18.4 bits), Expect = 2.0e-55, Sum P(2) = 2.0e-55
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 193 VNAYTPPLKKPEVPNPYLGF 212
++A P KK NP +GF
Sbjct: 314 LSASNSPAKKRRSKNPTVGF 333
>FB|FBgn0036702 [details] [associations]
symbol:CG6512 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0046331
"lateral inhibition" evidence=IMP] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:AE014296
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0030163 GO:GO:0046331
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OMA:YSEDTAM HSSP:Q9LCZ4 UniGene:Dm.986 GeneID:39922
KEGG:dme:Dmel_CG6512 FlyBase:FBgn0036702 GenomeRNAi:39922
NextBio:816090 EMBL:AY084199 RefSeq:NP_730248.2 SMR:Q8T4G5
IntAct:Q8T4G5 MINT:MINT-1004758 STRING:Q8T4G5
EnsemblMetazoa:FBtr0075251 UCSC:CG6512-RA InParanoid:Q8T4G5
Uniprot:Q8T4G5
Length = 826
Score = 572 (206.4 bits), Expect = 2.7e-55, P = 2.7e-55
Identities = 137/341 (40%), Positives = 198/341 (58%)
Query: 413 VDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
+ V F DVAG + ++E+ E V F + + Y G + KTLLAKA A
Sbjct: 323 IGVGFKDVAGCEEAKIEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATA 382
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
GEA V F ++S S+F+E++VGVG SRVR ++ A+ +AP ++FIDE+DAVGR+RG
Sbjct: 383 GEANVPFITVSGSEFLEMFVGVGPSRVRDMFAMARKHAPCILFIDEIDAVGRKRGGKTFG 442
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
G E++ TLNQLLV +DGF NV+ +A+TNR DILD AL+RPGRFDR+I++P P + G
Sbjct: 443 GHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDILDKALMRPGRFDRQIYVPAPDIKG 502
Query: 593 RMEILKVHARKKPMADDVDYLA--VASMTDGMVGAELANIVEVAAINMMRDGRTEITTDD 650
R I KVH + D + L+ +A++T G GA++AN+ AA+ RD + I
Sbjct: 503 RASIFKVHLGNLKTSLDKNELSRKMAALTPGFTGADIANVCNEAALIAARDSKDSIVLKH 562
Query: 651 LLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRE 708
QA + GM ++K + E R VA +EA AV + V+I PR G+
Sbjct: 563 FEQAIERVIAGM-EKKTNVLAPEEKRTVAHHEAGHAVAGWFLEHADPLLKVSIIPR-GKG 620
Query: 709 LGYVR-MKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELW 748
LGY + + DH +LS++ L D + + L R A+EL+
Sbjct: 621 LGYAQYLPKDHY-----LLSKEQLFDRMCMTLGGRVAEELF 656
>UNIPROTKB|I3LLQ8 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0006508 GO:GO:0040014 GO:GO:0004222 GO:GO:0042552
GO:GO:0007409 GO:GO:0030163 GeneTree:ENSGT00530000063070
GO:GO:0017111 GO:GO:0042407 GO:GO:0008053 GO:GO:0034982
TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675
GO:GO:0060013 EMBL:FP565334 Ensembl:ENSSSCT00000025900
Uniprot:I3LLQ8
Length = 597
Score = 567 (204.7 bits), Expect = 6.1e-55, P = 6.1e-55
Identities = 144/341 (42%), Positives = 200/341 (58%)
Query: 402 GKGLPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXX- 460
G+ + L+ +DVKF DVAG + +LE+ E V F + + Y+ G +
Sbjct: 83 GETTAKVLKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKKGAILTGPP 142
Query: 461 XXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELD 520
KTLLAKA AGEA V F ++S S+F+E++VGVG +RVR L+ A+ NAP ++FIDE+D
Sbjct: 143 GTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEID 202
Query: 521 AVGRERGLIKGS-GGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGR 578
AVGR+RG +G+ GGQ E++ TLNQLLV +DGF NV+ +A TNRPDILDPAL+RPGR
Sbjct: 203 AVGRKRG--RGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGR 260
Query: 579 FDRKIFIPKPGLIGRMEILKVHAR--KKPMADDVDYLA--VASMTDGMVGAELANIVEVA 634
FDR+IFI P + GR I KVH R K + + LA +AS+T G GA++AN+ A
Sbjct: 261 FDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKEKLARKLASLTPGFSGADVANVCNEA 320
Query: 635 AINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPD 692
A+ R I QA + G L++K + E + VA +EA AV
Sbjct: 321 ALIAARHLSDSINQKHFEQAIE-RVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEH 379
Query: 693 LKNIEFVTIAPRAGRELGYVRM--KMDHMKFKEGMLSRQSL 731
+ V+I PR G+ LGY + K ++ KE +L R +
Sbjct: 380 ADPLLKVSIIPR-GKGLGYAQYLPKEQYLYTKEQLLDRMCM 419
>DICTYBASE|DDB_G0267492 [details] [associations]
symbol:DDB_G0267492 "peptidase M41, FtsH
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0267492 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
EMBL:AAFI02000003 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 RefSeq:XP_647076.1
ProteinModelPortal:Q55GV8 SMR:Q55GV8 MEROPS:M41.A18
EnsemblProtists:DDB0189322 GeneID:8615880 KEGG:ddi:DDB_G0267492
OMA:RINENNQ Uniprot:Q55GV8
Length = 720
Score = 542 (195.9 bits), Expect = 2.3e-54, Sum P(2) = 2.3e-54
Identities = 140/369 (37%), Positives = 209/369 (56%)
Query: 417 FSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAG 476
F+DV G + + EL+++V F + E Y RR + KTLLAK++AGEA
Sbjct: 163 FADVMGAEEAKGELQDLVDFLRNPEKYYRRNIVMPKGILLVGPPGTGKTLLAKSLAGEAR 222
Query: 477 VNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQE 536
V+F +I+ S+F E +VGVGA RVR L++ A+ N+P +VFIDE+D+VG R K
Sbjct: 223 VSFITINGSEFEEAFVGVGAKRVRELFEAARKNSPCIVFIDEIDSVGGSR--TKRVNYHP 280
Query: 537 RDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEI 596
+A LNQLLV LDGF+GR V+ +A+TN D LD AL+R GRFDR I +P P R I
Sbjct: 281 SEA-LNQLLVELDGFDGREGVMVMAATNYQDSLDTALIRSGRFDRIIQVPLPDGKARKSI 339
Query: 597 LKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQ 656
+ + + KP+A V+ +A T G GA+L N+V AA+ + EIT + L A
Sbjct: 340 IDHYLKDKPIASHVNTTTIAQSTPGFSGADLFNLVNWAALETTKHNLPEITMEQLENA-- 397
Query: 657 IEERGMLDRKERS---SETWRQV-AINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYV 712
+E M+ ++ S S+ R++ A +EA A+VA+ P + + TI PR G LG V
Sbjct: 398 -KENLMMGKERHSLLMSDEARKICAFHEAGHALVAIMTPGARTVHKATIMPR-GDALGLV 455
Query: 713 RMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTF 772
M ++ +E ++++ L+ + V + RAA+EL G+ +S + A S A+
Sbjct: 456 SM----LEKEETFVTKKQLIAQMDVAMGGRAAEELILGKENISQGASSDIQKATSIAKAM 511
Query: 773 VLG-GLSDK 780
V G+S+K
Sbjct: 512 VSNYGMSEK 520
Score = 37 (18.1 bits), Expect = 2.3e-54, Sum P(2) = 2.3e-54
Identities = 15/54 (27%), Positives = 28/54 (51%)
Query: 111 KKWSKDLPIVSDRIAYTEIFSLKDEGKLKHVIKSPSGSLRQKAEPVLVVLEDSR 164
+++S P++S R T IFS D KL + + + +L +P+ V + S+
Sbjct: 65 REFSTTKPLLSFRKRATSIFSGTD--KLNNQDQLNNNNLNV-GQPIKVQVVQSK 115
>POMBASE|SPCC965.04c [details] [associations]
symbol:SPCC965.04c "mitochondrial inner membrane i-AAA
protease complex subunit Yme1 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0004176 "ATP-dependent peptidase
activity" evidence=ISO] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0031942 "i-AAA complex" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC965.04c GO:GO:0016021 GO:GO:0005524 EMBL:CU329672
GO:GO:0046872 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0007005 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942 PIR:T41657
RefSeq:NP_588514.1 ProteinModelPortal:O59824 SMR:O59824
STRING:O59824 EnsemblFungi:SPCC965.04c.1 GeneID:2538746
KEGG:spo:SPCC965.04c KO:K08955 OMA:LANANMS OrthoDB:EOG4FR40W
NextBio:20799930 Uniprot:O59824
Length = 709
Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
Identities = 146/380 (38%), Positives = 213/380 (56%)
Query: 410 ERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAK 469
ER ++V+FSDV G+ + + ELEEIV F + R G + KT+LA+
Sbjct: 259 ERAINVRFSDVQGVDEAKEELEEIVDFLRDPTHFTRLGGKLPRGVLLTGPPGTGKTMLAR 318
Query: 470 AVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLI 529
AVAGEA V FF +S SQF E+YVGVGA RVR L+ A+ APS++FIDELDA+G++R
Sbjct: 319 AVAGEANVPFFFMSGSQFDEMYVGVGAKRVRELFAAARKQAPSIIFIDELDAIGQKRNAR 378
Query: 530 KGSGGQERDATLNQLLVCLDGFEGRGN----VITIASTNRPDILDPALVRPGRFDRKIFI 585
+ ++ TLNQLLV LDGF + V+ I +TN P+ LDPAL RPGRFDR I +
Sbjct: 379 DAAHMRQ---TLNQLLVDLDGFSKNEDLAHPVVFIGATNFPESLDPALTRPGRFDRHIHV 435
Query: 586 PKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTE 645
P P + GR+ IL H R P+ DVD +A T G GA+LAN++ AA+ ++ T
Sbjct: 436 PLPDVRGRLAILLQHTRHVPLGKDVDLSIIARGTSGFAGADLANLINQAAVYASKNLSTA 495
Query: 646 ITTDDLLQAAQIEERGMLDRKERSS----ETWRQVAINEAAMAVVAVNFPDLKNIEFVTI 701
++ DL + ++R ++ + +S+ E A +E A+VA+ + TI
Sbjct: 496 VSMRDLEWS---KDRILMGAERKSAFITPENKLMTAYHEGGHALVALFTKNAMRPYKATI 552
Query: 702 APRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAET 761
PR G LG + + + M K+ +R+ L + V + RAA+EL G+ ++++
Sbjct: 553 MPR-GSSLG-MTISLPDMD-KDSW-TREEYLAMLDVTMGGRAAEELLYGKDKITSGAHND 608
Query: 762 ADNARSAARTFVLG-GLSDK 780
D A AR V G+SD+
Sbjct: 609 IDKATQVARRMVTEFGMSDR 628
>SGD|S000000819 [details] [associations]
symbol:AFG3 "Component, with Yta12p, of the mitochondrial
inner membrane m-AAA pro" species:4932 "Saccharomyces cerevisiae"
[GO:0016887 "ATPase activity" evidence=ISS;IMP;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0031966 "mitochondrial
membrane" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA;IMP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA;IMP]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IDA] [GO:0001302 "replicative cell
aging" evidence=IMP] [GO:0002181 "cytoplasmic translation"
evidence=IMP] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006461 "protein complex assembly"
evidence=IMP] [GO:0006465 "signal peptide processing" evidence=IMP]
[GO:0005745 "m-AAA complex" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 SGD:S000000819
GO:GO:0005524 GO:GO:0006461 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0001302 GO:GO:0004222
GO:GO:0016887 EMBL:BK006939 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
TIGRFAMs:TIGR01241 OMA:LYRFVTT EMBL:X81066 EMBL:X76643 EMBL:U18778
PIR:S46611 RefSeq:NP_010933.1 ProteinModelPortal:P39925 SMR:P39925
DIP:DIP-802N IntAct:P39925 MINT:MINT-563722 STRING:P39925
MEROPS:M41.002 PaxDb:P39925 PeptideAtlas:P39925
EnsemblFungi:YER017C GeneID:856737 KEGG:sce:YER017C CYGD:YER017c
OrthoDB:EOG4J14HG NextBio:982861 Genevestigator:P39925
GermOnline:YER017C GO:GO:0005745 GO:GO:0097002 GO:GO:0002181
GO:GO:0045041 GO:GO:0006465 Uniprot:P39925
Length = 761
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 141/358 (39%), Positives = 200/358 (55%)
Query: 402 GKGLPQYLERGVDVK--FSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXX 459
GK + + D+K F +VAG + + E+ E V F + Y + G +
Sbjct: 270 GKSRAKLFNKETDIKISFKNVAGCDEAKQEIMEFVHFLKNPGKYTKLGAKIPRGAILSGP 329
Query: 460 XXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDEL 519
KTLLAKA AGEA V F S+S S+FVE++VGVGASRVR L+ +A+ APS++FIDE+
Sbjct: 330 PGTGKTLLAKATAGEANVPFLSVSGSEFVEMFVGVGASRVRDLFTQARSMAPSIIFIDEI 389
Query: 520 DAVGRERGLIKGSGG--QERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPG 577
DA+G+ERG GG ER+ATLNQLLV +DGF V+ +A TNRPD+LD AL+RPG
Sbjct: 390 DAIGKERGKGGALGGANDEREATLNQLLVEMDGFTTSDQVVVLAGTNRPDVLDNALMRPG 449
Query: 578 RFDRKIFIPKPGLIGRMEILKVHARK---KPM-ADDVDYLA--VASMTDGMVGAELANIV 631
RFDR I I P + GR +I VH ++ P+ DD++ L+ +A++T G GA++AN
Sbjct: 450 RFDRHIQIDSPDVNGRQQIYLVHLKRLNLDPLLTDDMNNLSGKLATLTPGFTGADIANAC 509
Query: 632 EVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVN 689
AA+ R IT QA + G L++K R S E R VA +EA AV
Sbjct: 510 NEAALIAARHNDPYITIHHFEQAIERVIAG-LEKKTRVLSKEEKRSVAYHEAGHAVCGWF 568
Query: 690 FPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADEL 747
+ V+I PR LGY + ++ + ++S + + + L R ++EL
Sbjct: 569 LKYADPLLKVSIIPRGQGALGYAQ----YLPPDQYLISEEQFRHRMIMALGGRVSEEL 622
>GENEDB_PFALCIPARUM|PFL1925w [details] [associations]
symbol:PFL1925w "cell division protein FtsH,
putative" species:5833 "Plasmodium falciparum" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 559 (201.8 bits), Expect = 1.6e-53, P = 1.6e-53
Identities = 142/382 (37%), Positives = 213/382 (55%)
Query: 415 VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGE 474
++F ++AG+ + +LEL E+V F + E Y G R KT+LA+AVA E
Sbjct: 146 IRFEEIAGIDESKLELLEVVDFIKNREKYHEMGARMPKGVLLVGPPGSGKTMLARAVATE 205
Query: 475 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRER--GLIKGS 532
A V + S +F+EIYVG GA R+R L+ A+ APS+VFIDE+DA+G +R G + G+
Sbjct: 206 ANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSVAPSIVFIDEIDAIGGKRSSGSVNGA 265
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
G +E D TLNQLLV +DGF +++ I +TNR D LD AL+RPGRFDR +++P P + G
Sbjct: 266 GQREHDQTLNQLLVEMDGFSNTVHIMVIGATNRIDTLDSALLRPGRFDRIVYVPLPDING 325
Query: 593 RMEILKVHARK-KPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDL 651
R +IL+++ +K K D +A +T G GA+L N+V A I R+ ++ +T ++L
Sbjct: 326 RKKILEIYIKKIKSDLKLEDIEKIARLTPGFSGADLENVVNEATILATRNNKSLVTINEL 385
Query: 652 LQAAQIEERGMLDRKERSSETWRQV-AINEAAMAVVAVNF-PDLKNIEFVTIAPRAGREL 709
+A G + R S+ R++ A +EA A+VA P I TI R G L
Sbjct: 386 YEARDKVSMGPERKSLRQSDHQRRITAYHEAGHAIVAYFLQPKTDPIHKATIISR-GNAL 444
Query: 710 GYV-RMKMD--HMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNAR 766
GYV ++ +D H FK M ++ + V + R A+E+ G+ + S+ + A
Sbjct: 445 GYVEQIPVDDRHNYFKSQMEAK------LAVCMGGRTAEEIVFGKSETSSGASSDISRAT 498
Query: 767 SAARTFVLG-GLSDKHFGLSNF 787
A V G+SDK G N+
Sbjct: 499 EIAYKMVTEWGMSDK-LGPLNY 519
>UNIPROTKB|Q8I526 [details] [associations]
symbol:PFL1925w "Cell division protein FtsH, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 559 (201.8 bits), Expect = 1.6e-53, P = 1.6e-53
Identities = 142/382 (37%), Positives = 213/382 (55%)
Query: 415 VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGE 474
++F ++AG+ + +LEL E+V F + E Y G R KT+LA+AVA E
Sbjct: 146 IRFEEIAGIDESKLELLEVVDFIKNREKYHEMGARMPKGVLLVGPPGSGKTMLARAVATE 205
Query: 475 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRER--GLIKGS 532
A V + S +F+EIYVG GA R+R L+ A+ APS+VFIDE+DA+G +R G + G+
Sbjct: 206 ANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSVAPSIVFIDEIDAIGGKRSSGSVNGA 265
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
G +E D TLNQLLV +DGF +++ I +TNR D LD AL+RPGRFDR +++P P + G
Sbjct: 266 GQREHDQTLNQLLVEMDGFSNTVHIMVIGATNRIDTLDSALLRPGRFDRIVYVPLPDING 325
Query: 593 RMEILKVHARK-KPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDL 651
R +IL+++ +K K D +A +T G GA+L N+V A I R+ ++ +T ++L
Sbjct: 326 RKKILEIYIKKIKSDLKLEDIEKIARLTPGFSGADLENVVNEATILATRNNKSLVTINEL 385
Query: 652 LQAAQIEERGMLDRKERSSETWRQV-AINEAAMAVVAVNF-PDLKNIEFVTIAPRAGREL 709
+A G + R S+ R++ A +EA A+VA P I TI R G L
Sbjct: 386 YEARDKVSMGPERKSLRQSDHQRRITAYHEAGHAIVAYFLQPKTDPIHKATIISR-GNAL 444
Query: 710 GYV-RMKMD--HMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNAR 766
GYV ++ +D H FK M ++ + V + R A+E+ G+ + S+ + A
Sbjct: 445 GYVEQIPVDDRHNYFKSQMEAK------LAVCMGGRTAEEIVFGKSETSSGASSDISRAT 498
Query: 767 SAARTFVLG-GLSDKHFGLSNF 787
A V G+SDK G N+
Sbjct: 499 EIAYKMVTEWGMSDK-LGPLNY 519
>TAIR|locus:2138146 [details] [associations]
symbol:FtsHi1 "FTSH inactive protease 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008237 "metallopeptidase
activity" evidence=ISS] [GO:0009658 "chloroplast organization"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0007020 "microtubule nucleation"
evidence=RCA] [GO:0010020 "chloroplast fission" evidence=IMP]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0051301 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
eggNOG:COG0465 GO:GO:0017111 GO:GO:0010020 EMBL:AC002343
EMBL:AL078468 EMBL:AL161560 HSSP:Q9LCZ4 IPI:IPI00537043 PIR:T08913
RefSeq:NP_567691.1 UniGene:At.3392 ProteinModelPortal:O22993
SMR:O22993 PaxDb:O22993 PRIDE:O22993 EnsemblPlants:AT4G23940.1
GeneID:828494 KEGG:ath:AT4G23940 TAIR:At4g23940
HOGENOM:HOG000029491 InParanoid:O22993 OMA:QMAGSEF PhylomeDB:O22993
ProtClustDB:CLSN2689578 ArrayExpress:O22993 Genevestigator:O22993
Uniprot:O22993
Length = 946
Score = 548 (198.0 bits), Expect = 2.0e-53, Sum P(2) = 2.0e-53
Identities = 139/352 (39%), Positives = 208/352 (59%)
Query: 415 VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGE 474
VKF+DVAG+ + EL+E+VK+ + +++ + G++ KTL+AKA+AGE
Sbjct: 427 VKFADVAGIDEAVDELQELVKYLKNPDLFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGE 486
Query: 475 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG-RERGLIK--- 530
AGV F+ ++ S+FVE+ VGVG++R+R L++ AK N PSV+FIDE+DA+ R +G+ K
Sbjct: 487 AGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKENS 546
Query: 531 ----GSGGQERDATLNQLLVCLDGFE-GRGNVITIASTNRPDILDPALVRPGRFDRKIFI 585
+ QER+ TLNQLL+ LDGF+ G+G VI + +TNR D+LDPAL+RPGRFDRKI +
Sbjct: 547 DQLYNAATQERETTLNQLLIELDGFDTGKG-VIFLGATNRRDLLDPALLRPGRFDRKIRV 605
Query: 586 PKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTE 645
P GR++ILK+HA K M+D VD + AS G GA+LA +V+ AA+ +R
Sbjct: 606 RPPNAKGRLDILKIHASKVKMSDSVDLSSYASNLPGWSGAKLAQLVQEAALVAVRKTHNS 665
Query: 646 ITTDDLLQAAQIEERGMLD-RKERSSETWRQVAINEAAMAVVA---VNFPDLK--NIEFV 699
I D+ A G E + + A E +A+ + + + + K + V
Sbjct: 666 ILQSDMDDAVDRLTVGPTRIGLELGHQGQCRRATTEVGVAITSHLLLRYENAKIERCDRV 725
Query: 700 TIAPRAGRELGYVRM-KMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCG 750
+I PR G+ L V ++D + G L + LL + V L RAA+E+ G
Sbjct: 726 SIIPR-GQTLSQVVFHRLDDESYMFGRLPQ--LLHRLQVLLGGRAAEEVIYG 774
Score = 37 (18.1 bits), Expect = 2.0e-53, Sum P(2) = 2.0e-53
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 146 SGSLRQKAEPVLVVLEDSRVLRTVLPSLDSNRKFWESW 183
+ SL +LVV+ ++R L N + W+ W
Sbjct: 370 ASSLEMLKPILLVVMTMVLLVRFTLSRRPKNFRKWDLW 407
>CGD|CAL0002950 [details] [associations]
symbol:YME1 species:5476 "Candida albicans" [GO:0031942
"i-AAA complex" evidence=IEA] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process" evidence=IEA]
[GO:0001300 "chronological cell aging" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 CGD:CAL0002950 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.004
EMBL:AACQ01000068 EMBL:AACQ01000067 KO:K08955 RefSeq:XP_716504.1
RefSeq:XP_716560.1 ProteinModelPortal:Q5A458 SMR:Q5A458
STRING:Q5A458 GeneID:3641816 GeneID:3641839 KEGG:cal:CaO19.1252
KEGG:cal:CaO19.8836 Uniprot:Q5A458
Length = 687
Score = 547 (197.6 bits), Expect = 8.0e-53, P = 8.0e-53
Identities = 145/379 (38%), Positives = 206/379 (54%)
Query: 415 VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGE 474
V+F DV G + R ELEEIV F + G + KTLLA+A AGE
Sbjct: 222 VRFKDVQGCDEARAELEEIVDFLKDPSKFTGLGGKLPKGVLLTGPPGTGKTLLARATAGE 281
Query: 475 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 534
AGV FF +S S+F E+YVGVGA R+R L+ +A+D AP+++FIDELDA+G +R +
Sbjct: 282 AGVPFFFMSGSEFDELYVGVGAKRIRELFSQARDKAPAIIFIDELDAIGGKRNPKDQAYA 341
Query: 535 QERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRM 594
++ TLNQLLV LDGF +I I +TN P+ LD AL RPGRFD+++ + P + GR+
Sbjct: 342 KQ---TLNQLLVELDGFSQTEGIIIIGATNFPESLDKALTRPGRFDKEVIVDLPDVRGRI 398
Query: 595 EILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 654
+ILK H + ADDVD +A T G+ GAEL N+V AA++ + + + A
Sbjct: 399 DILKHHMQNVETADDVDPSIIARGTPGLSGAELMNLVNQAAVHASQLSAPAVDMNHFEWA 458
Query: 655 AQIEERGMLDRKERSSETWR-QVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVR 713
G +K +E R A +EA A++A+ + TI PR GR LG +
Sbjct: 459 KDKILMGAAKKKMVITEESRINTAYHEAGHAIMAMFSKGATPLYKATILPR-GRALG-IT 516
Query: 714 MKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFV 773
++ M K M S+Q + V + + A+E+ G+ +++ A NA S AR V
Sbjct: 517 FQLPEMD-KVDM-SKQECFARLDVCMGGKIAEEMINGKENVTSGCASDLSNATSVARAMV 574
Query: 774 LG-GLSDKHFG---LSNFW 788
G+SDK G LS+ W
Sbjct: 575 TSYGMSDK-IGPVRLSDDW 592
>ASPGD|ASPL0000029469 [details] [associations]
symbol:AN5588 species:162425 "Emericella nidulans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006457 "protein
folding" evidence=IEA] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0031942 "i-AAA
complex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:SEFDEVY EnsemblFungi:CADANIAT00003489
Uniprot:C8VG17
Length = 784
Score = 547 (197.6 bits), Expect = 1.0e-52, P = 1.0e-52
Identities = 146/375 (38%), Positives = 207/375 (55%)
Query: 415 VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGE 474
V+FSDV G + + EL+E+V+F + E + G + KTLLA+AVAGE
Sbjct: 312 VRFSDVHGCDEAKDELQELVEFLLNPERFSSLGGKLPKGVLLVGPPGTGKTLLARAVAGE 371
Query: 475 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 534
AGV FF +S S+F E+YVGVGA RVR L+ +A+ +P+++FIDELDA+G +R
Sbjct: 372 AGVPFFYMSGSEFDEVYVGVGAKRVRELFNQARSKSPAIIFIDELDAIGAKRN------- 424
Query: 535 QERDA-----TLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPG 589
ERDA TLNQLL LDGF VI +A+TN P++LD AL RPGRFDRK+ + P
Sbjct: 425 -ERDAAYVKQTLNQLLTELDGFSQSTGVIILAATNYPELLDKALTRPGRFDRKVVVDLPD 483
Query: 590 LIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTD 649
+ GRM+ILK H + ++ DVD +A T G GA+L N+V AAI R+ ++++T
Sbjct: 484 VRGRMDILKHHMKNVQISTDVDVAVIARGTSGFSGADLENLVNQAAIFASRNKQSKVTPK 543
Query: 650 DLLQAAQIEERGMLDRKERSSETWRQV-AINEAAMAVVAVNFPDLKNIEFVTIAPRAGRE 708
D A G R + + + A +EA A+VA P + +TI PR G
Sbjct: 544 DFDYAKDKIIMGAEARSRIIQDKDKLLTAYHEAGHALVAYFSPSSMPLYKITIMPR-GMS 602
Query: 709 LGYVRMKMDHMKFKEGMLSRQSL--LDHITVQLAPRAADELWCGEGQLST-IWAETADNA 765
LG H + M+S+ + L I V + + A+EL GE ++++ I A+ A
Sbjct: 603 LGST-----HFLPEMDMVSKNYVQYLSDIDVSMGGKVAEELIYGEDKVTSGISADLASAT 657
Query: 766 RSAARTFVLGGLSDK 780
R+A G S K
Sbjct: 658 RTAFTLVTRFGYSKK 672
>DICTYBASE|DDB_G0293388 [details] [associations]
symbol:DDB_G0293388 "ATP-dependent metalloprotease"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0293388 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:AAFI02000204
RefSeq:XP_629167.2 ProteinModelPortal:Q54BW7 STRING:Q54BW7
MEROPS:M41.A16 EnsemblProtists:DDB0304811 GeneID:8629188
KEGG:ddi:DDB_G0293388 InParanoid:Q54BW7 OMA:ICLAGRA Uniprot:Q54BW7
Length = 767
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 141/395 (35%), Positives = 210/395 (53%)
Query: 397 VRRAYGKGLPQYLERGVD------VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRX 450
V+ A G PQY + D F DV G+ +++ ELEEIV + H Y G +
Sbjct: 274 VKEANGNK-PQYFAKEYDETNQTPTSFDDVKGIQEVKEELEEIVDYLLHPTKYNSIGAKL 332
Query: 451 XXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNA 510
KTLLA+A+AGEAGV+F + S F E YVGVG+ RVR L+ A++
Sbjct: 333 PKGVLLSGEPGTGKTLLARAIAGEAGVSFLYTTGSSFDEKYVGVGSRRVRELFNAAREKQ 392
Query: 511 PSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILD 570
P ++FIDE+DAVG+ R + TL QLL +DGFEG ++ I +TN P+ LD
Sbjct: 393 PCIIFIDEIDAVGKSRNTA------HHNETLLQLLTEMDGFEGNSQIMIIGATNAPNSLD 446
Query: 571 PALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANI 630
PAL+RPGRFDR I +P P + GR EI+ + +K +V +A T G GA+L+N+
Sbjct: 447 PALLRPGRFDRHISVPIPDMKGRSEIIDHYLKKVKHTVEVKADTIARATPGFTGADLSNL 506
Query: 631 VEVAAINMMRDGRTEITTDDLLQAAQ--IEERGMLDRKERSSETWRQVAINEAAMAVVAV 688
+ AAI +++G+ I+ + A + R L+ S E R A +EA A+VA
Sbjct: 507 INTAAIKAVQNGKETISIKQIDDARDDILMGRARLNAV-MSEEARRNTAYHEAGHALVAA 565
Query: 689 NFPDLKNIEFVTIAPRAGRELGYVRM--KMDHMKFKEGMLSRQSLLDHITVQLAPRAADE 746
I TI R G+ LG V +MDH+++ +R+ ++ + + LA RAA+E
Sbjct: 566 MTEAADPIHKATIVQR-GQALGMVSQLPEMDHVQY-----TRKQMMARLAICLAGRAAEE 619
Query: 747 LWCGEGQLSTIWAETADNARSAARTFVLG-GLSDK 780
++ G +++ + A S A + + G+SDK
Sbjct: 620 IFFGVDGVTSGASSDFQQASSLAFSMITKWGMSDK 654
>ZFIN|ZDB-GENE-070410-25 [details] [associations]
symbol:yme1l1b "YME1-like 1b" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-070410-25 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 KO:K08955
MEROPS:M41.A20 HOVERGEN:HBG057127 EMBL:BC139529 IPI:IPI00614293
RefSeq:NP_001082983.1 UniGene:Dr.148676 ProteinModelPortal:A4QNU8
SMR:A4QNU8 STRING:A4QNU8 GeneID:557907 KEGG:dre:557907 CTD:557907
InParanoid:A4QNU8 NextBio:20882221 Uniprot:A4QNU8
Length = 722
Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 139/372 (37%), Positives = 213/372 (57%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAG 473
+V F V G+ + + EL+E+V+F + + + G + KTLLA+AVAG
Sbjct: 284 NVTFEHVKGVEEAKNELQEVVEFLRNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAG 343
Query: 474 EAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSG 533
EA V F+ S S+F E++VGVGASR+R+L++EAK NAP V+FIDELD+VG +R I+
Sbjct: 344 EADVPFYYASGSEFDEMFVGVGASRIRNLFREAKGNAPCVIFIDELDSVGGKR--IESPM 401
Query: 534 GQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 593
T+NQLL +DGF+ VI I +TN P+ LD AL+RPGRFD ++ +P+P + GR
Sbjct: 402 HPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGR 461
Query: 594 MEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQ 653
EILK + +K + V+ +A T G GAEL N+V AA+ DG+ +T +L
Sbjct: 462 TEILKWYLKKIKVDSAVEAEVIARGTVGFSGAELENLVNQAALKAAVDGKDMVTMKELEF 521
Query: 654 AAQIEERGMLDRKERSSETWRQ----VAINEAAMAVVAVNFPDLKNIEFVTIAPRAGREL 709
A +++ ++ + RS+E ++ A +E+ A++A D I TI PR G L
Sbjct: 522 A---KDKILMGPERRSAEIDKRNKEITAYHESGHAIIAYYTKDAMPINKATIMPR-GPTL 577
Query: 710 GYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAA 769
G+V M ++ ++ E +R LL + V + R A+EL G ++T + D+A A
Sbjct: 578 GHVSMLPENDRWSE---TRAQLLAQMDVSMGGRVAEELIFGNENITTGASSDFDSATKIA 634
Query: 770 RTFVLG-GLSDK 780
+ V G+S+K
Sbjct: 635 KMMVTRFGMSEK 646
>WB|WBGene00010842 [details] [associations]
symbol:ymel-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:Z49128 PIR:T23690
RefSeq:NP_499298.2 ProteinModelPortal:P54813 SMR:P54813
MEROPS:M41.A11 PaxDb:P54813 EnsemblMetazoa:M03C11.5.1
EnsemblMetazoa:M03C11.5.2 GeneID:176460 KEGG:cel:CELE_M03C11.5
UCSC:M03C11.5.1 CTD:176460 WormBase:M03C11.5
GeneTree:ENSGT00550000074836 InParanoid:P54813 OMA:KWNQYES
NextBio:892672 Uniprot:P54813
Length = 723
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 142/390 (36%), Positives = 207/390 (53%)
Query: 406 PQYLE-RGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXK 464
PQ + V V F DV G+ + +LE+EEIV + E Y R G R K
Sbjct: 235 PQEVNPEDVQVTFDDVRGMDEAKLEVEEIVDYLKDPEKYSRLGGRLPKGVLLVGPPGTGK 294
Query: 465 TLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGR 524
TLLA+A+AGEA V FF + S+F E+ VG GA RVR L+ +AK AP ++FIDE+D+VG
Sbjct: 295 TLLARAIAGEAQVPFFHTAGSEFDEVLVGQGARRVRDLFDKAKARAPCIIFIDEIDSVGS 354
Query: 525 ERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIF 584
+R + S + T+NQLL +DGF +I IA+TNR D LD AL+RPGRFD ++
Sbjct: 355 KR--VSNSIHPYANQTINQLLSEMDGFTRNEGIIVIAATNRVDDLDKALLRPGRFDVRVT 412
Query: 585 IPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRT 644
+PKP L GR++I + K + +D +A + G GA++ N+V AA+ D
Sbjct: 413 VPKPDLAGRVDIFNFYLSKIVHSGGIDPKVLAKGSTGFTGADIENMVNQAALKAATDNAV 472
Query: 645 EITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIA 702
E+T L +A G R E R A +EA +V++ D + VTI
Sbjct: 473 EVTMAYLDEARDRVLMGPARTGGRIPDEEANRNTAYHEAGHTLVSLYTKDATPLHKVTII 532
Query: 703 PRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETA 762
PR G+ LG+ M + ++ L++ +L + V + R A+EL G+ +++T A+
Sbjct: 533 PR-GQSLGHTAMLPEKDSYQ---LTKAQMLATLDVMMGGRVAEELIFGDDKVTTGAADDL 588
Query: 763 DNARSAARTFV-LGGLSDKHFGLSNFWVAD 791
A A V + G+SDK GL +F D
Sbjct: 589 SKATQLAVQMVKVFGMSDK-VGLRDFTAQD 617
>UNIPROTKB|F1PRV6 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 OMA:HTSHVSA EMBL:AAEX03001169
Ensembl:ENSCAFT00000007090 Uniprot:F1PRV6
Length = 748
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 139/372 (37%), Positives = 209/372 (56%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAG 473
+V F V G+ + + EL+E+V+F + + + G + KTLLA+AVAG
Sbjct: 311 NVTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAG 370
Query: 474 EAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSG 533
EA V F+ S S+F E++VGVGASR+R+L++EAK NAP V+FIDELD+VG +R I+
Sbjct: 371 EADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKR--IESPM 428
Query: 534 GQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 593
T+NQLL +DGF+ VI I +TN P+ LD AL+RPGRFD ++ +P+P + GR
Sbjct: 429 HPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGR 488
Query: 594 MEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQ 653
EILK + K VD +A T G GAEL N+V AA+ DG+ +T +L
Sbjct: 489 TEILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEF 548
Query: 654 AAQIEERGMLDRKERSSETWRQ----VAINEAAMAVVAVNFPDLKNIEFVTIAPRAGREL 709
+ +++ ++ + RS E + A +E+ A++A D I TI PR G L
Sbjct: 549 S---KDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPR-GPTL 604
Query: 710 GYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAA 769
G+V + ++ ++ E +R LL + V + R A+EL G ++T + DNA A
Sbjct: 605 GHVSLLPENDRWNE---TRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIA 661
Query: 770 RTFVLG-GLSDK 780
+ V G+S+K
Sbjct: 662 KRMVTKFGMSEK 673
>UNIPROTKB|J9NRR9 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0016020
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 GeneTree:ENSGT00550000074836 EMBL:AAEX03001169
Ensembl:ENSCAFT00000045217 Uniprot:J9NRR9
Length = 694
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 139/372 (37%), Positives = 209/372 (56%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAG 473
+V F V G+ + + EL+E+V+F + + + G + KTLLA+AVAG
Sbjct: 277 NVTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAG 336
Query: 474 EAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSG 533
EA V F+ S S+F E++VGVGASR+R+L++EAK NAP V+FIDELD+VG +R I+
Sbjct: 337 EADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKR--IESPM 394
Query: 534 GQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 593
T+NQLL +DGF+ VI I +TN P+ LD AL+RPGRFD ++ +P+P + GR
Sbjct: 395 HPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGR 454
Query: 594 MEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQ 653
EILK + K VD +A T G GAEL N+V AA+ DG+ +T +L
Sbjct: 455 TEILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEF 514
Query: 654 AAQIEERGMLDRKERSSETWRQ----VAINEAAMAVVAVNFPDLKNIEFVTIAPRAGREL 709
+ +++ ++ + RS E + A +E+ A++A D I TI PR G L
Sbjct: 515 S---KDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPR-GPTL 570
Query: 710 GYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAA 769
G+V + ++ ++ E +R LL + V + R A+EL G ++T + DNA A
Sbjct: 571 GHVSLLPENDRWNE---TRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIA 627
Query: 770 RTFVLG-GLSDK 780
+ V G+S+K
Sbjct: 628 KRMVTKFGMSEK 639
>UNIPROTKB|F1RVK1 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008283 "cell proliferation" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005743
GO:GO:0008283 GO:GO:0004222 GO:GO:0006515 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 GeneTree:ENSGT00550000074836
OMA:HTSHVSA EMBL:FP016148 Ensembl:ENSSSCT00000012110 Uniprot:F1RVK1
Length = 768
Score = 537 (194.1 bits), Expect = 1.1e-51, P = 1.1e-51
Identities = 139/372 (37%), Positives = 209/372 (56%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAG 473
+V F V G+ + + EL+E+V+F + + + G + KTLLA+AVAG
Sbjct: 330 NVTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAG 389
Query: 474 EAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSG 533
EA V F+ S S+F E++VGVGASR+R+L++EAK NAP V+FIDELD+VG +R I+
Sbjct: 390 EADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKR--IESPM 447
Query: 534 GQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 593
T+NQLL +DGF+ VI I +TN P+ LD AL+RPGRFD ++ +P+P + GR
Sbjct: 448 HPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGR 507
Query: 594 MEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQ 653
EILK + K VD +A T G GAEL N+V AA+ DG+ +T +L
Sbjct: 508 TEILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEF 567
Query: 654 AAQIEERGMLDRKERSSETWRQ----VAINEAAMAVVAVNFPDLKNIEFVTIAPRAGREL 709
+ +++ ++ + RS E + A +E+ A++A D I TI PR G L
Sbjct: 568 S---KDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPR-GPTL 623
Query: 710 GYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAA 769
G+V + ++ ++ E +R LL + V + R A+EL G ++T + DNA A
Sbjct: 624 GHVSLLPENDRWNE---TRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIA 680
Query: 770 RTFVLG-GLSDK 780
+ V G+S+K
Sbjct: 681 KRMVTKFGMSEK 692
>UNIPROTKB|F1NTK8 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 EMBL:AADN02000548 IPI:IPI00601077
Ensembl:ENSGALT00000012112 Uniprot:F1NTK8
Length = 712
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 140/369 (37%), Positives = 203/369 (55%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAG 473
+V F V G+ + + EL+E+V+F + + G + KTLLA+AVAG
Sbjct: 274 NVTFEHVKGVEEAKQELQEVVEFLKNPHKFTVLGGKLPKGILLVGPPGTGKTLLARAVAG 333
Query: 474 EAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSG 533
EA V F+ S S+F E++VGVGASR+RSL++EAK NAP V+FIDELD+VG +R I+
Sbjct: 334 EADVPFYYASGSEFDEMFVGVGASRIRSLFREAKANAPCVIFIDELDSVGGKR--IESPM 391
Query: 534 GQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 593
T+NQLL +DGF+ V+ I +TN P+ LD AL+RPGRFD ++ +PKP + GR
Sbjct: 392 HPYSRQTINQLLAEMDGFKPNEGVVIIGATNFPEALDNALIRPGRFDMQVTVPKPDVRGR 451
Query: 594 MEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQ 653
EILK + K VD +A T G GAEL N+V AA+ DG+ +T +L
Sbjct: 452 TEILKWYLNKIKYDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKDMVTMKELEF 511
Query: 654 AAQIEERGMLDRKERSSETWRQV-AINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYV 712
+ G R E + + A +E+ A++A D I TI R G LG+V
Sbjct: 512 SKDKILMGPERRSVEIDEKNKTITAYHESGHAIIAYYTKDAMPINKATIMTR-GTTLGHV 570
Query: 713 RMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTF 772
+ ++ ++ E +R LL + V + RAA+EL G ++T + DNA A+
Sbjct: 571 SLLPENDRWSE---TRSQLLAQMDVCMGGRAAEELIFGSDHITTGASSDFDNATKIAKLM 627
Query: 773 VLG-GLSDK 780
V G+S+K
Sbjct: 628 VTRFGMSEK 636
>UNIPROTKB|F1P519 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005743 GO:GO:0008283 GO:GO:0004222
GO:GO:0006515 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
GeneTree:ENSGT00550000074836 OMA:HTSHVSA EMBL:AADN02000548
IPI:IPI00822340 Ensembl:ENSGALT00000038444 Uniprot:F1P519
Length = 717
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 140/369 (37%), Positives = 203/369 (55%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAG 473
+V F V G+ + + EL+E+V+F + + G + KTLLA+AVAG
Sbjct: 279 NVTFEHVKGVEEAKQELQEVVEFLKNPHKFTVLGGKLPKGILLVGPPGTGKTLLARAVAG 338
Query: 474 EAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSG 533
EA V F+ S S+F E++VGVGASR+RSL++EAK NAP V+FIDELD+VG +R I+
Sbjct: 339 EADVPFYYASGSEFDEMFVGVGASRIRSLFREAKANAPCVIFIDELDSVGGKR--IESPM 396
Query: 534 GQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 593
T+NQLL +DGF+ V+ I +TN P+ LD AL+RPGRFD ++ +PKP + GR
Sbjct: 397 HPYSRQTINQLLAEMDGFKPNEGVVIIGATNFPEALDNALIRPGRFDMQVTVPKPDVRGR 456
Query: 594 MEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQ 653
EILK + K VD +A T G GAEL N+V AA+ DG+ +T +L
Sbjct: 457 TEILKWYLNKIKYDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKDMVTMKELEF 516
Query: 654 AAQIEERGMLDRKERSSETWRQV-AINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYV 712
+ G R E + + A +E+ A++A D I TI R G LG+V
Sbjct: 517 SKDKILMGPERRSVEIDEKNKTITAYHESGHAIIAYYTKDAMPINKATIMTR-GTTLGHV 575
Query: 713 RMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTF 772
+ ++ ++ E +R LL + V + RAA+EL G ++T + DNA A+
Sbjct: 576 SLLPENDRWSE---TRSQLLAQMDVCMGGRAAEELIFGSDHITTGASSDFDNATKIAKLM 632
Query: 773 VLG-GLSDK 780
V G+S+K
Sbjct: 633 VTRFGMSEK 641
>MGI|MGI:1351651 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006515
"misfolded or incompletely synthesized protein catabolic process"
evidence=ISO] [GO:0007005 "mitochondrion organization"
evidence=ISO] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008283
"cell proliferation" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
MGI:MGI:1351651 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0004222 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
HOGENOM:HOG000217276 GeneTree:ENSGT00550000074836 KO:K08955
CTD:10730 HOVERGEN:HBG057127 OMA:HTSHVSA EMBL:AF090430
EMBL:AY136286 EMBL:AY136287 EMBL:AK079175 EMBL:BC007128
IPI:IPI00136555 RefSeq:NP_038799.1 UniGene:Mm.23335
ProteinModelPortal:O88967 SMR:O88967 STRING:O88967
PhosphoSite:O88967 PaxDb:O88967 PRIDE:O88967
Ensembl:ENSMUST00000028117 GeneID:27377 KEGG:mmu:27377
InParanoid:O88967 OrthoDB:EOG4KH2TK NextBio:305300 Bgee:O88967
CleanEx:MM_YME1L1 Genevestigator:O88967
GermOnline:ENSMUSG00000026775 Uniprot:O88967
Length = 715
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 139/372 (37%), Positives = 209/372 (56%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAG 473
+V F V G+ + + EL+E+V+F + + + G + KTLLA+AVAG
Sbjct: 277 NVTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAG 336
Query: 474 EAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSG 533
EA V F+ S S+F E++VGVGASR+R+L++EAK NAP V+FIDELD+VG +R I+
Sbjct: 337 EADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKR--IESPM 394
Query: 534 GQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 593
T+NQLL +DGF+ VI I +TN P+ LD AL+RPGRFD ++ +P+P + GR
Sbjct: 395 HPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGR 454
Query: 594 MEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQ 653
EILK + K VD +A T G GAEL N+V AA+ DG+ +T +L
Sbjct: 455 TEILKWYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEF 514
Query: 654 AAQIEERGMLDRKERSSETWRQ----VAINEAAMAVVAVNFPDLKNIEFVTIAPRAGREL 709
+ +++ ++ + RS E + A +E+ A++A D I TI PR G L
Sbjct: 515 S---KDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPR-GPTL 570
Query: 710 GYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAA 769
G+V + ++ ++ E +R LL + V + R A+EL G ++T + DNA A
Sbjct: 571 GHVSLLPENDRWNE---TRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIA 627
Query: 770 RTFVLG-GLSDK 780
+ V G+S+K
Sbjct: 628 KRMVTKFGMSEK 639
>UNIPROTKB|G3V886 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382 RGD:620764
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 KO:K08955 MEROPS:M41.A20 OMA:HTSHVSA
UniGene:Rn.8153 EMBL:CH474100 RefSeq:XP_003751780.1
Ensembl:ENSRNOT00000023395 GeneID:100910779 KEGG:rno:100910779
Uniprot:G3V886
Length = 715
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 139/372 (37%), Positives = 209/372 (56%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAG 473
+V F V G+ + + EL+E+V+F + + + G + KTLLA+AVAG
Sbjct: 277 NVTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAG 336
Query: 474 EAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSG 533
EA V F+ S S+F E++VGVGASR+R+L++EAK NAP V+FIDELD+VG +R I+
Sbjct: 337 EADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKR--IESPM 394
Query: 534 GQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 593
T+NQLL +DGF+ VI I +TN P+ LD AL+RPGRFD ++ +P+P + GR
Sbjct: 395 HPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGR 454
Query: 594 MEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQ 653
EILK + K VD +A T G GAEL N+V AA+ DG+ +T +L
Sbjct: 455 TEILKWYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEF 514
Query: 654 AAQIEERGMLDRKERSSETWRQ----VAINEAAMAVVAVNFPDLKNIEFVTIAPRAGREL 709
+ +++ ++ + RS E + A +E+ A++A D I TI PR G L
Sbjct: 515 S---KDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPR-GPTL 570
Query: 710 GYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAA 769
G+V + ++ ++ E +R LL + V + R A+EL G ++T + DNA A
Sbjct: 571 GHVSLLPENDRWNE---TRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIA 627
Query: 770 RTFVLG-GLSDK 780
+ V G+S+K
Sbjct: 628 KRMVTKFGMSEK 639
>UNIPROTKB|Q96TA2 [details] [associations]
symbol:YME1L1 "ATP-dependent zinc metalloprotease YME1L1"
species:9606 "Homo sapiens" [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0007005 "mitochondrion organization"
evidence=IMP] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IMP] [GO:0008283 "cell
proliferation" evidence=IMP] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005524 GO:GO:0016020 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0006508 GO:GO:0004222
EMBL:CH471072 EMBL:AL160291 GO:GO:0030163 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
EMBL:AL162272 HOGENOM:HOG000217276 UniGene:Hs.74647 KO:K08955
EMBL:AF151782 EMBL:AJ132637 EMBL:AY358484 EMBL:AK297973
EMBL:BC023507 EMBL:BC024032 IPI:IPI00045946 IPI:IPI00099529
RefSeq:NP_001240795.1 RefSeq:NP_055078.1 RefSeq:NP_647473.1
UniGene:Hs.499145 ProteinModelPortal:Q96TA2 SMR:Q96TA2
IntAct:Q96TA2 STRING:Q96TA2 MEROPS:M41.A20 PhosphoSite:Q96TA2
DMDM:46397258 PaxDb:Q96TA2 PRIDE:Q96TA2 Ensembl:ENST00000326799
Ensembl:ENST00000375972 Ensembl:ENST00000376016 GeneID:10730
KEGG:hsa:10730 UCSC:uc001iti.3 UCSC:uc001itj.3 CTD:10730
GeneCards:GC10M027439 H-InvDB:HIX0127242 HGNC:HGNC:12843 MIM:607472
neXtProt:NX_Q96TA2 PharmGKB:PA37434 HOVERGEN:HBG057127
InParanoid:Q96TA2 OMA:HTSHVSA PhylomeDB:Q96TA2 ChiTaRS:YME1L1
GenomeRNAi:10730 NextBio:40734 ArrayExpress:Q96TA2 Bgee:Q96TA2
CleanEx:HS_YME1L1 Genevestigator:Q96TA2 GermOnline:ENSG00000136758
Uniprot:Q96TA2
Length = 773
Score = 537 (194.1 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 139/372 (37%), Positives = 209/372 (56%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAG 473
+V F V G+ + + EL+E+V+F + + + G + KTLLA+AVAG
Sbjct: 335 NVTFEHVKGVEEAKQELQEVVEFLKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVAG 394
Query: 474 EAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSG 533
EA V F+ S S+F E++VGVGASR+R+L++EAK NAP V+FIDELD+VG +R I+
Sbjct: 395 EADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKR--IESPM 452
Query: 534 GQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 593
T+NQLL +DGF+ VI I +TN P+ LD AL+RPGRFD ++ +P+P + GR
Sbjct: 453 HPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGR 512
Query: 594 MEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQ 653
EILK + K VD +A T G GAEL N+V AA+ DG+ +T +L
Sbjct: 513 TEILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEF 572
Query: 654 AAQIEERGMLDRKERSSETWRQ----VAINEAAMAVVAVNFPDLKNIEFVTIAPRAGREL 709
+ +++ ++ + RS E + A +E+ A++A D I TI PR G L
Sbjct: 573 S---KDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPR-GPTL 628
Query: 710 GYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAA 769
G+V + ++ ++ E +R LL + V + R A+EL G ++T + DNA A
Sbjct: 629 GHVSLLPENDRWNE---TRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIA 685
Query: 770 RTFVLG-GLSDK 780
+ V G+S+K
Sbjct: 686 KRMVTKFGMSEK 697
>UNIPROTKB|A6QR12 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008283 "cell proliferation" evidence=ISS] [GO:0005743
"mitochondrial inner membrane" evidence=ISS] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005743
GO:GO:0008283 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005 HOGENOM:HOG000217276
GeneTree:ENSGT00550000074836 KO:K08955 MEROPS:M41.A20 CTD:10730
HOVERGEN:HBG057127 OMA:HTSHVSA OrthoDB:EOG4KH2TK EMBL:DAAA02035354
EMBL:BC150071 IPI:IPI00866889 RefSeq:NP_001095320.1 UniGene:Bt.1786
SMR:A6QR12 STRING:A6QR12 Ensembl:ENSBTAT00000021868 GeneID:505118
KEGG:bta:505118 InParanoid:A6QR12 NextBio:20866987 Uniprot:A6QR12
Length = 717
Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 139/374 (37%), Positives = 211/374 (56%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAG 473
+V F V G+ + + EL+E+V+F + + + G + KTLLA+AVAG
Sbjct: 277 NVTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAG 336
Query: 474 EAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSG 533
EA V F+ S S+F E++VGVGASR+R+L++EAK NAP V+FIDELD+VG +R I+
Sbjct: 337 EADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKR--IESPM 394
Query: 534 GQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 593
T+NQLL +DGF+ VI I +TN P+ LD AL+RPGRFD ++ +P+P + GR
Sbjct: 395 HPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGR 454
Query: 594 MEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQ 653
EILK + K VD +A T G GAEL N+V AA+ DG+ +T +L
Sbjct: 455 TEILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEF 514
Query: 654 AAQIEERGMLDRKERSSETWRQ----VAINEAAMAVVAVNFPDLKNIEFVTIAPRAGREL 709
+ +++ ++ + RS E + A +E+ A++A D I TI PR G L
Sbjct: 515 S---KDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPR-GPTL 570
Query: 710 GYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETAD--NARS 767
G+V + ++ ++ E +R LL + V + R A+EL G ++T + ++D NA
Sbjct: 571 GHVSLLPENDRWNE---TRAQLLAQMDVSMGGRVAEELIFGSDHITTGYCASSDFDNATK 627
Query: 768 AARTFVLG-GLSDK 780
A+ V G+S+K
Sbjct: 628 IAKRMVTKFGMSEK 641
>GENEDB_PFALCIPARUM|PF14_0616 [details] [associations]
symbol:PF14_0616 "i-AAA protease, putative"
species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
EMBL:AE014187 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 HSSP:Q9LCZ4 RefSeq:XP_001348790.1
ProteinModelPortal:Q8IKI9 SMR:Q8IKI9 PRIDE:Q8IKI9
EnsemblProtists:PF14_0616:mRNA GeneID:812198 KEGG:pfa:PF14_0616
EuPathDB:PlasmoDB:PF3D7_1464900 OMA:HMENVET ProtClustDB:CLSZ2434669
Uniprot:Q8IKI9
Length = 706
Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 136/386 (35%), Positives = 209/386 (54%)
Query: 413 VDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
V V F+DV G +++ ELEEI+ + + + + + G + KTL+A+A+A
Sbjct: 249 VKVTFADVKGCDEVKQELEEIIDYLKNSDKFTKIGAKLPKGILLSGEPGTGKTLIARAIA 308
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
GEA V F S S+F E++VGVGA R+R L+Q AK +AP +VFIDE+DAVG +R S
Sbjct: 309 GEANVPFLQASGSEFEEMFVGVGARRIRELFQAAKKHAPCIVFIDEIDAVGSKRSSRDNS 368
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
+ TLNQLLV LDGFE ++ I +TN P LD ALVRPGR D+ I +P P + G
Sbjct: 369 AVR---MTLNQLLVELDGFEQNEGIVVICATNFPQSLDKALVRPGRLDKTIVVPLPDIKG 425
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLL 652
R EILK+++ K ++ DVD ++ T GM GA+L NI+ +AAI +G+ + + +
Sbjct: 426 RYEILKMYSNKIVLSKDVDLHVLSRRTVGMTGADLNNILNIAAIKCSVEGKKSVDMNSIE 485
Query: 653 QAAQIEERGMLDRKERSSETWRQV-AINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGY 711
QA G L RK +E + + A +E +V + TI PR G LG
Sbjct: 486 QAFDRVVVG-LQRKSPLNEEEKNITAYHEGGHTLVNFYTKGSDPVHKATIMPR-GMSLG- 542
Query: 712 VRMKMDHM-KFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAAR 770
V K+ K+ + + QS +D + + ++E+ G+ ++T + A A+
Sbjct: 543 VTWKIPISDKYSQKIKDVQSEID---ILMGGLVSEEIIFGKNNVTTGCSSDLQKATHIAQ 599
Query: 771 TFVLG-GLSDKHFGLSNFWVADRINV 795
+ V+ G+ +S F + D+ N+
Sbjct: 600 SLVMNYGVGINEDNISMF-LHDKQNI 624
>UNIPROTKB|Q8IKI9 [details] [associations]
symbol:PF14_0616 "ATP-dependent protease la, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
EMBL:AE014187 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 HSSP:Q9LCZ4 RefSeq:XP_001348790.1
ProteinModelPortal:Q8IKI9 SMR:Q8IKI9 PRIDE:Q8IKI9
EnsemblProtists:PF14_0616:mRNA GeneID:812198 KEGG:pfa:PF14_0616
EuPathDB:PlasmoDB:PF3D7_1464900 OMA:HMENVET ProtClustDB:CLSZ2434669
Uniprot:Q8IKI9
Length = 706
Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 136/386 (35%), Positives = 209/386 (54%)
Query: 413 VDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
V V F+DV G +++ ELEEI+ + + + + + G + KTL+A+A+A
Sbjct: 249 VKVTFADVKGCDEVKQELEEIIDYLKNSDKFTKIGAKLPKGILLSGEPGTGKTLIARAIA 308
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
GEA V F S S+F E++VGVGA R+R L+Q AK +AP +VFIDE+DAVG +R S
Sbjct: 309 GEANVPFLQASGSEFEEMFVGVGARRIRELFQAAKKHAPCIVFIDEIDAVGSKRSSRDNS 368
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
+ TLNQLLV LDGFE ++ I +TN P LD ALVRPGR D+ I +P P + G
Sbjct: 369 AVR---MTLNQLLVELDGFEQNEGIVVICATNFPQSLDKALVRPGRLDKTIVVPLPDIKG 425
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLL 652
R EILK+++ K ++ DVD ++ T GM GA+L NI+ +AAI +G+ + + +
Sbjct: 426 RYEILKMYSNKIVLSKDVDLHVLSRRTVGMTGADLNNILNIAAIKCSVEGKKSVDMNSIE 485
Query: 653 QAAQIEERGMLDRKERSSETWRQV-AINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGY 711
QA G L RK +E + + A +E +V + TI PR G LG
Sbjct: 486 QAFDRVVVG-LQRKSPLNEEEKNITAYHEGGHTLVNFYTKGSDPVHKATIMPR-GMSLG- 542
Query: 712 VRMKMDHM-KFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAAR 770
V K+ K+ + + QS +D + + ++E+ G+ ++T + A A+
Sbjct: 543 VTWKIPISDKYSQKIKDVQSEID---ILMGGLVSEEIIFGKNNVTTGCSSDLQKATHIAQ 599
Query: 771 TFVLG-GLSDKHFGLSNFWVADRINV 795
+ V+ G+ +S F + D+ N+
Sbjct: 600 SLVMNYGVGINEDNISMF-LHDKQNI 624
>ZFIN|ZDB-GENE-030131-5391 [details] [associations]
symbol:spg7 "spastic paraplegia 7" species:7955
"Danio rerio" [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 SMART:SM00382
ZFIN:ZDB-GENE-030131-5391 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:6687 KO:K09552 OMA:MMDHEAK EMBL:AL954648 EMBL:BX470191
IPI:IPI00483001 RefSeq:XP_001923118.1 UniGene:Dr.105782
Ensembl:ENSDART00000098438 GeneID:794740 KEGG:dre:794740
NextBio:20931970 Uniprot:E7F2S4
Length = 788
Score = 526 (190.2 bits), Expect = 3.0e-50, P = 3.0e-50
Identities = 128/340 (37%), Positives = 195/340 (57%)
Query: 412 GVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAV 471
G V F DVAG+ + ++E++E V + + + Y + G + KTLLAKAV
Sbjct: 294 GKGVSFKDVAGMREAKMEVKEFVDYLKNPDRYLQLGAKVPKGSLLLGPPGCGKTLLAKAV 353
Query: 472 AGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGL-IK 530
A EA V F +++ S+FVE+ G+GA+RVRSL++EA+ AP +V+IDE+DAVG++R +
Sbjct: 354 ATEAQVPFLAMAGSEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTNMS 413
Query: 531 GSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGL 590
G E + TLNQLLV +DG +VI +ASTNR DILD AL+RPGR DR IFI P L
Sbjct: 414 GFSNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDNALMRPGRLDRHIFIDLPTL 473
Query: 591 IGRMEILKVHARKKPMADDVDY--LAVASMTDGMVGAELANIVEVAAINMMRDGRTEITT 648
R EI + H + + D+ L +A +T G GA++ANI AA++ R+G I T
Sbjct: 474 QERKEIFEQHLKILKLTQPADFYSLRLAELTPGFSGADIANICNEAALHAAREGFKSIDT 533
Query: 649 DDLLQAAQIEERGMLDR-KERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGR 707
A + G + + K S E R VA +E+ A+V + + V+IAPR
Sbjct: 534 FSFEYAVERVIAGSVKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNA 593
Query: 708 ELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADEL 747
LG+ ++ + +F + +++ L + + + L RA++ +
Sbjct: 594 ALGFAQI-LPRDQF---LFTKEQLFERMCMALGGRASEAI 629
>RGD|620764 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO;ISS] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO;ISS]
[GO:0007005 "mitochondrion organization" evidence=ISO;ISS]
[GO:0008283 "cell proliferation" evidence=ISO;ISS] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 RGD:620764 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0004222 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
HOGENOM:HOG000217276 MEROPS:M41.A20 HOVERGEN:HBG057127
OrthoDB:EOG4KH2TK EMBL:AF151784 IPI:IPI00206065 UniGene:Rn.8153
ProteinModelPortal:Q925S8 SMR:Q925S8 MINT:MINT-4611841
STRING:Q925S8 PRIDE:Q925S8 UCSC:RGD:620764 InParanoid:Q925S8
Genevestigator:Q925S8 GermOnline:ENSRNOG00000017100 Uniprot:Q925S8
Length = 715
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 138/372 (37%), Positives = 207/372 (55%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAG 473
+V F V G+ + + EL+E+V+F + + + G + KTLLA+AVAG
Sbjct: 277 NVTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAG 336
Query: 474 EAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSG 533
EA V F+ S S+F E++VGVGASR+R+L++EAK NAP V+FIDELD+VG +R I+
Sbjct: 337 EADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKR--IEFPM 394
Query: 534 GQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 593
T+ QLL +DGF+ VI I +TN P+ LD AL+RPGRFD ++ +P+P + GR
Sbjct: 395 HPYSRQTIIQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGR 454
Query: 594 MEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQ 653
EILK + K VD +A T G GAEL N+V AA+ DG+ +T +L
Sbjct: 455 TEILKWYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEF 514
Query: 654 AAQIEERGMLDRKERSSETWRQ----VAINEAAMAVVAVNFPDLKNIEFVTIAPRAGREL 709
+ +++ ++ + RS E + A +E+ A++A D I TI PR G L
Sbjct: 515 S---KDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPR-GPTL 570
Query: 710 GYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAA 769
G+V + ++ ++ E R LL + V + R A+EL G ++T + DNA A
Sbjct: 571 GHVSLLPENDRWNE---IRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIA 627
Query: 770 RTFVLG-GLSDK 780
+ V G+S+K
Sbjct: 628 KRMVTKFGMSEK 639
>ZFIN|ZDB-GENE-091113-41 [details] [associations]
symbol:yme1l1a "YME1-like 1a" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-091113-41 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 GO:GO:0006508
GO:GO:0004222 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 EMBL:CU138525 IPI:IPI00962165
Ensembl:ENSDART00000110185 Uniprot:E7EZJ5
Length = 729
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 136/372 (36%), Positives = 210/372 (56%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAG 473
++ F V G+ + + EL+++V+F + + + G + KTLLA+AVAG
Sbjct: 291 NITFEHVKGVEEAKNELQDVVEFLRNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAG 350
Query: 474 EAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSG 533
EA V F+ S S+F E++VGVGASR+R+L++EAK +AP V+FIDELD+VG +R I+
Sbjct: 351 EADVPFYYASGSEFDEMFVGVGASRIRNLFKEAKASAPCVIFIDELDSVGGKR--IESPM 408
Query: 534 GQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 593
T+NQLL +DGF+ VI I +TN + LD ALVRPGRFD ++ +P P + GR
Sbjct: 409 HPYSRQTINQLLAEMDGFKPNEGVIVIGATNFAEALDNALVRPGRFDMQVTVPIPDVKGR 468
Query: 594 MEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQ 653
EIL+ + +K + +D +A T G GAEL N+V AA+ DG+ +T +L
Sbjct: 469 TEILEWYLKKIKVDSAIDAEIIARGTVGFSGAELENLVNQAALKAAADGKDLVTMKELKF 528
Query: 654 AAQIEERGMLDRKERSSETWRQ----VAINEAAMAVVAVNFPDLKNIEFVTIAPRAGREL 709
A +++ ++ + RS E ++ A +E+ A+VA D I TI PR G L
Sbjct: 529 A---KDKILMGPERRSVEIDKRNKTITAYHESGHAIVAYYTKDAMPINKATIMPR-GPSL 584
Query: 710 GYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAA 769
G+V + ++ ++ E +R LL + V + R A+EL G Q+++ + D A A
Sbjct: 585 GHVSLLPENDRWSE---TRAQLLAQMDVSMGGRVAEELVFGNDQITSGASSDFDGATKIA 641
Query: 770 RTFVLG-GLSDK 780
+ V G+SDK
Sbjct: 642 QMMVTRFGMSDK 653
>SGD|S000006228 [details] [associations]
symbol:YME1 "Catalytic subunit of the mitochondrial inner
membrane i-AAA protease" species:4932 "Saccharomyces cerevisiae"
[GO:0006457 "protein folding" evidence=IMP] [GO:0005743
"mitochondrial inner membrane" evidence=IEA;IDA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IGI;IMP]
[GO:0006515 "misfolded or incompletely synthesized protein
catabolic process" evidence=IMP] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0031942 "i-AAA complex"
evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
SGD:S000006228 GO:GO:0005524 GO:GO:0006457 GO:GO:0046872
GO:GO:0004222 EMBL:Z71255 EMBL:BK006949 GO:GO:0006515
eggNOG:COG0465 TIGRFAMs:TIGR01241 EMBL:Z49274 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942
GeneTree:ENSGT00550000074836 KO:K08955 OrthoDB:EOG4FR40W
EMBL:L14616 EMBL:X81067 EMBL:D16332 PIR:S54498 RefSeq:NP_015349.1
ProteinModelPortal:P32795 SMR:P32795 IntAct:P32795 STRING:P32795
PaxDb:P32795 PeptideAtlas:P32795 EnsemblFungi:YPR024W GeneID:856135
KEGG:sce:YPR024W CYGD:YPR024w OMA:SEFDEVY NextBio:981236
Genevestigator:P32795 GermOnline:YPR024W Uniprot:P32795
Length = 747
Score = 521 (188.5 bits), Expect = 5.5e-50, P = 5.5e-50
Identities = 138/380 (36%), Positives = 199/380 (52%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAG 473
+VKF DV G + R ELEEIV F Y G + KTLLA+A AG
Sbjct: 277 NVKFDDVCGCDEARAELEEIVDFLKDPTKYESLGGKLPKGVLLTGPPGTGKTLLARATAG 336
Query: 474 EAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSG 533
EAGV+FF +S S+F E+YVGVGA R+R L+ +A+ AP+++FIDELDA+G +R +
Sbjct: 337 EAGVDFFFMSGSEFDEVYVGVGAKRIRDLFAQARSRAPAIIFIDELDAIGGKRNPKDQAY 396
Query: 534 GQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 593
++ TLNQLLV LDGF +I I +TN P+ LD AL RPGRFD+ + + P + GR
Sbjct: 397 AKQ---TLNQLLVELDGFSQTSGIIIIGATNFPEALDKALTRPGRFDKVVNVDLPDVRGR 453
Query: 594 MEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQ 653
+ILK H +K +AD+VD +A T G+ GAELAN+V AA+ + +
Sbjct: 454 ADILKHHMKKITLADNVDPTIIARGTPGLSGAELANLVNQAAVYACQKNAVSVDMSHFEW 513
Query: 654 AAQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGY 711
A G +RK + + A +EA A++A + TI PR GR LG
Sbjct: 514 AKDKILMGA-ERKTMVLTDAARKATAFHEAGHAIMAKYTNGATPLYKATILPR-GRALG- 570
Query: 712 VRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAART 771
+ ++ M + ++++ + V + + A+EL G+ ++ +A AR
Sbjct: 571 ITFQLPEMDKVD--ITKRECQARLDVCMGGKIAEELIYGKDNTTSGCGSDLQSATGTARA 628
Query: 772 FVLG-GLSDK--HFGLSNFW 788
V G+SD LS W
Sbjct: 629 MVTQYGMSDDVGPVNLSENW 648
>UNIPROTKB|F1NXP0 [details] [associations]
symbol:SPG7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=IEA] [GO:0008089 "anterograde axon cargo
transport" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0008089
GO:GO:0030163 GeneTree:ENSGT00530000063070 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 OMA:MMDHEAK EMBL:AADN02054132
IPI:IPI00601320 Ensembl:ENSGALT00000010016 Uniprot:F1NXP0
Length = 768
Score = 521 (188.5 bits), Expect = 8.3e-50, P = 8.3e-50
Identities = 124/340 (36%), Positives = 195/340 (57%)
Query: 412 GVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAV 471
G + F DVAG+ + ++E++E V + + + Y + G + KTLLAKAV
Sbjct: 276 GKGIGFKDVAGMHEAKMEVKEFVDYLKNPDRYLQLGAKVPKGALLLGPPGCGKTLLAKAV 335
Query: 472 AGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGL-IK 530
A EA V F +++ S+FVE+ G+GA+RVRSL++EA+ AP +V+IDE+DAVG++R +
Sbjct: 336 ATEAQVPFLAMAGSEFVEVIGGLGAARVRSLFREAQARAPCIVYIDEIDAVGKKRSTNVS 395
Query: 531 GSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGL 590
G E + TLNQLLV +DG +VI +ASTNR D+LD AL+RPGR DR IFI P L
Sbjct: 396 GFANAEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADVLDNALMRPGRLDRHIFIDLPTL 455
Query: 591 IGRMEILKVHARKKPMADDVDYLA--VASMTDGMVGAELANIVEVAAINMMRDGRTEITT 648
R EI + H + + D + + +A +T G GA++ANI AA++ R+G I T
Sbjct: 456 QERREIFEQHLKGLKLIQDASFYSQHLAELTPGFSGADIANICNEAALHAAREGHKSIDT 515
Query: 649 DDLLQAAQIEERGMLDR-KERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGR 707
+ A + G R K S E + VA +E+ A+V + + V+IAPR
Sbjct: 516 FNFEYAVERVIAGTAKRNKILSPEERKVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNA 575
Query: 708 ELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADEL 747
LG+ ++ + ++ + +++ LL+ + + L R ++ +
Sbjct: 576 ALGFAQI----LPREQYLFTKEQLLERMCMALGGRVSEAI 611
>UNIPROTKB|A7E2Z6 [details] [associations]
symbol:SPG7 "SPG7 protein" species:9913 "Bos taurus"
[GO:0008089 "anterograde axon cargo transport" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
MEROPS:M41.006 CTD:6687 KO:K09552 OMA:MMDHEAK OrthoDB:EOG4PG60F
EMBL:DAAA02046269 EMBL:BC151632 IPI:IPI00866907
RefSeq:NP_001095492.1 UniGene:Bt.11239 SMR:A7E2Z6 STRING:A7E2Z6
Ensembl:ENSBTAT00000032500 GeneID:515269 KEGG:bta:515269
InParanoid:A7E2Z6 NextBio:20871741 Uniprot:A7E2Z6
Length = 779
Score = 520 (188.1 bits), Expect = 1.3e-49, P = 1.3e-49
Identities = 124/340 (36%), Positives = 192/340 (56%)
Query: 412 GVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAV 471
G V F DVAG+ + +LE++E V + E + + G + KTLLAKAV
Sbjct: 303 GKGVSFKDVAGMHEAKLEVKEFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAV 362
Query: 472 AGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGL-IK 530
A EA V F +++ +FVE+ G+GA+RVRSL++EA+ AP +V+IDE+DAVG++R +
Sbjct: 363 ATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTAVS 422
Query: 531 GSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGL 590
G E + TLNQLLV +DG +VI +A+TNR DILD AL+RPGR DR +FI P L
Sbjct: 423 GFSNTEEEQTLNQLLVEMDGMGTTDHVIVLAATNRADILDNALLRPGRLDRHVFIDLPTL 482
Query: 591 IGRMEILKVHARKKPMADDVDYLA--VASMTDGMVGAELANIVEVAAINMMRDGRTEITT 648
R EI + H + + + + +A +T G GA++ANI AA++ R+G T + T
Sbjct: 483 QERKEIFEQHLKSLKLTRASSFYSQRLAELTPGFSGADIANICNEAALHAAREGHTAVHT 542
Query: 649 DDLLQAAQIEERGMLDR-KERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGR 707
+L A + G + K S E + VA +E+ A+V + + V+I PR
Sbjct: 543 SNLDYAVERVVAGTAKKSKVLSKEEQKVVAFHESGHALVGWLLEHTEAVMKVSITPRTNA 602
Query: 708 ELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADEL 747
LG+ +M + + + +R+ L + + + L RA++ +
Sbjct: 603 ALGFAQM----LPRDQHLFTREQLFERMCMALGGRASESI 638
>MGI|MGI:2385906 [details] [associations]
symbol:Spg7 "spastic paraplegia 7 homolog (human)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IMP] [GO:0007155 "cell adhesion" evidence=TAS] [GO:0008089
"anterograde axon cargo transport" evidence=IMP] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=TAS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 MGI:MGI:2385906 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0030155 GO:GO:0031966 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0007155 GO:GO:0004222
GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOVERGEN:HBG050184 GO:GO:0017111
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0007005 MEROPS:M41.006
CTD:6687 KO:K09552 ChiTaRS:SPG7 EMBL:AF512565 EMBL:AF547215
EMBL:AK145540 EMBL:BC024466 EMBL:BC024986 EMBL:BC051051
EMBL:BC096690 IPI:IPI00170128 RefSeq:NP_694816.3 UniGene:Mm.292075
ProteinModelPortal:Q3ULF4 SMR:Q3ULF4 STRING:Q3ULF4
PhosphoSite:Q3ULF4 PaxDb:Q3ULF4 PRIDE:Q3ULF4
Ensembl:ENSMUST00000108868 GeneID:234847 KEGG:mmu:234847
UCSC:uc009nud.1 InParanoid:Q3ULF4 NextBio:382391 Bgee:Q3ULF4
CleanEx:MM_SPG7 Genevestigator:Q3ULF4 Uniprot:Q3ULF4
Length = 781
Score = 517 (187.1 bits), Expect = 2.9e-49, P = 2.9e-49
Identities = 129/363 (35%), Positives = 198/363 (54%)
Query: 412 GVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAV 471
G V F DVAG+ + +LE+ E V + E + + G + KTLLAKAV
Sbjct: 303 GKGVSFQDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAV 362
Query: 472 AGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGL-IK 530
A EA V F +++ +FVE+ G+GA+RVRSL++EA+ AP +V+IDE+DAVG++R +
Sbjct: 363 ATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTSMS 422
Query: 531 GSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGL 590
G E + TLNQLLV +DG +VI +ASTNR D+LD AL+RPGR DR +FI P L
Sbjct: 423 GFSNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADVLDNALMRPGRLDRHVFIDLPTL 482
Query: 591 IGRMEILKVHARKKPMADDVDYLA--VASMTDGMVGAELANIVEVAAINMMRDGRTEITT 648
R EI + H + + + + +A +T G GA++ANI AA++ R+G T + T
Sbjct: 483 QERREIFEQHLKGLKLTQPSSFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHT 542
Query: 649 DDLLQAAQIEERGMLDR-KERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGR 707
+ A + G + K S E R VA +E+ A+V + + V+IAPR
Sbjct: 543 FNFEYAVERVIAGTAKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNA 602
Query: 708 ELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARS 767
LG+ +M + + + +++ L + + + L RAA+ + S + + D+ R
Sbjct: 603 ALGFSQM----LPRDQYLFTKEQLFERMCMALGGRAAEAI-----SFSRVTSGAQDDLRK 653
Query: 768 AAR 770
R
Sbjct: 654 VTR 656
>FB|FBgn0024992 [details] [associations]
symbol:CG2658 species:7227 "Drosophila melanogaster"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9LCZ4
HOGENOM:HOG000226301 MEROPS:M41.A12 EMBL:AL023874
ProteinModelPortal:O76867 SMR:O76867 PaxDb:O76867 PRIDE:O76867
FlyBase:FBgn0024992 InParanoid:O76867 OrthoDB:EOG4V6WXK
ArrayExpress:O76867 Bgee:O76867 Uniprot:O76867
Length = 819
Score = 515 (186.3 bits), Expect = 7.1e-49, P = 7.1e-49
Identities = 129/343 (37%), Positives = 193/343 (56%)
Query: 412 GVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAV 471
G V F DVAGL + + E++E V + E Y+R G + KTLLAKAV
Sbjct: 335 GRGVLFRDVAGLSEAKQEVKEFVDYLKSPEKYQRLGAKVPRGALLLGPPGCGKTLLAKAV 394
Query: 472 AGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG---- 527
A EA V F S++ S+F+E+ G+GA+RVR L++E K AP +++IDE+DA+GR+R
Sbjct: 395 ATEAQVPFLSMNGSEFIEMIGGLGAARVRDLFKEGKKRAPCIIYIDEIDAIGRQRSGTES 454
Query: 528 LIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPK 587
+ +GS G E + TLNQLLV +DG + V+ +ASTNR DILD AL+RPGRFDR I I
Sbjct: 455 MGQGSSG-ESEQTLNQLLVEMDGMATKEGVLMLASTNRADILDKALLRPGRFDRHILIDL 513
Query: 588 PGLIGRMEILKVHARKKPMADDVDYLA--VASMTDGMVGAELANIVEVAAINMMRDGRTE 645
P L R EI + H + + +A +T G GA++AN+ AA++ R+ + E
Sbjct: 514 PTLAERKEIFEKHLSSVKLESPPTTFSQRLARLTPGFSGADIANVCNEAALHAARNTQME 573
Query: 646 ITTDDLLQAAQIEERGMLDRKERSSETWRQV-AINEAAMAVVAVNFPDLKNIEFVTIAPR 704
+++ +L A + G R S R+V A +E+ A+V P+ + VTI PR
Sbjct: 574 VSSKNLEYAVERLVGGTEKRSHALSLAERKVIAYHESGHALVGWMLPNSDILLKVTIVPR 633
Query: 705 AGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADEL 747
LG+ + + ++ + S++ L D + + L RAA+ L
Sbjct: 634 TSLALGFAQ----YTPSEQHLYSKEELFDKMCMALGGRAAENL 672
>UNIPROTKB|E2R4F3 [details] [associations]
symbol:SPG7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008089 "anterograde axon cargo transport"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0008089
GO:GO:0030163 GeneTree:ENSGT00530000063070 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 CTD:6687 KO:K09552 OMA:MMDHEAK
EMBL:AAEX03003953 EMBL:AAEX03003954 RefSeq:XP_546777.3
Ensembl:ENSCAFT00000031561 GeneID:489657 KEGG:cfa:489657
NextBio:20862809 Uniprot:E2R4F3
Length = 793
Score = 514 (186.0 bits), Expect = 7.2e-49, P = 7.2e-49
Identities = 124/326 (38%), Positives = 184/326 (56%)
Query: 412 GVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAV 471
G V F DVAG+ + +LE++E V + E + + G + KTLLAKAV
Sbjct: 303 GKGVSFKDVAGMHEAKLEVKEFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAV 362
Query: 472 AGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGL-IK 530
A EA V F +++ +FVE+ G+GA+RVRSL++EA+ AP +V+IDE+DAVG++R +
Sbjct: 363 ATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTTMS 422
Query: 531 GSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGL 590
G E + TLNQLLV +DG +VI +ASTNR DILD AL+RPGR DR +FI P L
Sbjct: 423 GFSNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDNALLRPGRLDRHVFIDLPTL 482
Query: 591 IGRMEILKVHARKKPMADDVDYLA--VASMTDGMVGAELANIVEVAAINMMRDGRTEITT 648
R EI + H + + + + +A +T G GA++ANI AA++ R+G T + T
Sbjct: 483 QERREIFEHHLKSLKLTQASSFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHT 542
Query: 649 DDLLQAAQIEERGMLDR-KERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGR 707
+ A + G + K S E + VA +E+ A+V + + V+IAPR
Sbjct: 543 FNFEYAVERVIAGTAKKSKILSKEEQKVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNA 602
Query: 708 ELGYVRM--KMDHMKFKEGMLSRQSL 731
LG+ +M + H+ KE + R +
Sbjct: 603 ALGFAQMLPRDQHLFTKEQLFERMCM 628
>UNIPROTKB|Q9UQ90 [details] [associations]
symbol:SPG7 "Paraplegin" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0008089 "anterograde axon cargo transport"
evidence=IEA] [GO:0031966 "mitochondrial membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004222
"metalloendopeptidase activity" evidence=IDA] [GO:0005739
"mitochondrion" evidence=TAS] [GO:0051082 "unfolded protein
binding" evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0008233 "peptidase activity" evidence=TAS]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0007399 GO:GO:0031966 GO:GO:0046872
GO:GO:0008219 GO:GO:0051082 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
HOGENOM:HOG000217277 HOVERGEN:HBG050184 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 EMBL:Y16610 EMBL:AF080525
EMBL:AF080511 EMBL:AF080512 EMBL:AF080513 EMBL:AF080514
EMBL:AF080515 EMBL:AF080516 EMBL:AF080517 EMBL:AF080518
EMBL:AF080519 EMBL:AF080520 EMBL:AF080521 EMBL:AF080522
EMBL:AF080523 EMBL:AF080524 EMBL:BC007692 EMBL:BC035929
EMBL:BC036104 EMBL:BC110530 EMBL:BC110531 IPI:IPI00299010
IPI:IPI00398508 RefSeq:NP_003110.1 RefSeq:NP_955399.1
UniGene:Hs.185597 PDB:2QZ4 PDBsum:2QZ4 ProteinModelPortal:Q9UQ90
SMR:Q9UQ90 IntAct:Q9UQ90 STRING:Q9UQ90 MEROPS:M41.006
PhosphoSite:Q9UQ90 DMDM:116242796 PaxDb:Q9UQ90 PRIDE:Q9UQ90
DNASU:6687 Ensembl:ENST00000268704 Ensembl:ENST00000341316
GeneID:6687 KEGG:hsa:6687 UCSC:uc002fni.3 UCSC:uc002fnj.3 CTD:6687
GeneCards:GC16P089574 HGNC:HGNC:11237 MIM:602783 MIM:607259
neXtProt:NX_Q9UQ90 Orphanet:99013 PharmGKB:PA36067
InParanoid:Q9UQ90 KO:K09552 OMA:MMDHEAK OrthoDB:EOG4PG60F
PhylomeDB:Q9UQ90 ChiTaRS:SPG7 EvolutionaryTrace:Q9UQ90
GenomeRNAi:6687 NextBio:26057 ArrayExpress:Q9UQ90 Bgee:Q9UQ90
CleanEx:HS_SPG7 Genevestigator:Q9UQ90 GermOnline:ENSG00000197912
Uniprot:Q9UQ90
Length = 795
Score = 514 (186.0 bits), Expect = 7.4e-49, P = 7.4e-49
Identities = 124/340 (36%), Positives = 190/340 (55%)
Query: 412 GVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAV 471
G V F DVAG+ + +LE+ E V + E + + G + KTLLAKAV
Sbjct: 303 GKGVSFKDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAV 362
Query: 472 AGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGL-IK 530
A EA V F +++ +FVE+ G+GA+RVRSL++EA+ AP +V+IDE+DAVG++R +
Sbjct: 363 ATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTTMS 422
Query: 531 GSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGL 590
G E + TLNQLLV +DG +VI +ASTNR DILD AL+RPGR DR +FI P L
Sbjct: 423 GFSNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDGALMRPGRLDRHVFIDLPTL 482
Query: 591 IGRMEILKVHARKKPMADDVDYLA--VASMTDGMVGAELANIVEVAAINMMRDGRTEITT 648
R EI + H + + + + +A +T G GA++ANI AA++ R+G T + T
Sbjct: 483 QERREIFEQHLKSLKLTQSSTFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHT 542
Query: 649 DDLLQAAQIEERGMLDR-KERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGR 707
+ A + G + K S E + VA +E+ A+V + + V+I PR
Sbjct: 543 LNFEYAVERVLAGTAKKSKILSKEEQKVVAFHESGHALVGWMLEHTEAVMKVSITPRTNA 602
Query: 708 ELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADEL 747
LG+ +M + + + +++ L + + + L RA++ L
Sbjct: 603 ALGFAQM----LPRDQHLFTKEQLFERMCMALGGRASEAL 638
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
Identities = 109/256 (42%), Positives = 158/256 (61%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
+V++ D+ GL K E+ E+V+ H E++ + G+ KTLLAKAVA
Sbjct: 166 NVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVA 225
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
E F + S+ V+ ++G GAS V+ +++ AK+ APS++FIDE+DA+ +R
Sbjct: 226 TETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDALTG 285
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
G +E TL QLL +DGF+ RG+V I +TNRPDILDPA++RPGRFDR I +P P G
Sbjct: 286 GDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKG 345
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLL 652
R+EILK+H RK +A+DV+ +A MT+G VGAEL I A +N +R+ R +T DD
Sbjct: 346 RLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDDFR 405
Query: 653 QAAQ-IEERGMLDRKE 667
+A + I E+ + KE
Sbjct: 406 KAVEKIMEKKKVKVKE 421
>TAIR|locus:2174819 [details] [associations]
symbol:EMB3144 "EMBRYO DEFECTIVE 3144" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006508
"proteolysis" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0006399 "tRNA metabolic process" evidence=RCA]
[GO:0009658 "chloroplast organization" evidence=RCA] [GO:0016556
"mRNA modification" evidence=RCA] [GO:0009536 "plastid"
evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 GO:GO:0009790
GO:GO:0017111 IPI:IPI00527762 RefSeq:NP_201263.2 UniGene:At.28951
ProteinModelPortal:F4KF14 SMR:F4KF14 PRIDE:F4KF14
EnsemblPlants:AT5G64580.1 GeneID:836579 KEGG:ath:AT5G64580
OMA:LCWISAK Uniprot:F4KF14
Length = 855
Score = 513 (185.6 bits), Expect = 1.5e-48, P = 1.5e-48
Identities = 143/389 (36%), Positives = 213/389 (54%)
Query: 402 GKGLPQYL--ERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXX 459
GK +++ E V F D AG I+ EL+EIV+ + E ++ +G+
Sbjct: 298 GKSRAKFISAEEKTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGP 357
Query: 460 XXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDEL 519
KTLLAKA+AGEAG+ FF+ + + FVE++VGV ASRV+ L+ ++ APS++FIDE+
Sbjct: 358 PGTGKTLLAKAIAGEAGLPFFAANGTDFVEMFVGVAASRVKDLFASSRSYAPSIIFIDEI 417
Query: 520 DAVGRERGLIK-GSGGQERDATLNQLLVCLDGFE-GRGNVITIASTNRPDILDPALVRPG 577
DA+G +RG G GG ER+ L Q+L +DGF+ V+ I +TNR DILDPAL+R G
Sbjct: 418 DAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVTTSQVLVIGATNRLDILDPALLRKG 477
Query: 578 RFDRKIFIPKPGLIGRMEILKVHARKK--PMADDVDYLA--VASMTDGMVGAELANIVEV 633
RFD+ I + P GR+ ILKVHAR K D+ + L VA T+ GAEL N++
Sbjct: 478 RFDKIIRVGLPSKDGRLAILKVHARNKFFRSEDEKEELLQEVAENTEDFTGAELQNVLNE 537
Query: 634 AAINMMRDGRTEITTDDLLQAAQIE----ERGMLDRKERSSETWRQVAINEAAMAVVAVN 689
A I R I ++LL+A + + E G D E E ++A EAA+AV+A
Sbjct: 538 AGILTARKDLDYIGREELLEALKRQKGTFETGQEDSTEVPEELKLRLAYREAAVAVLACY 597
Query: 690 FPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKE--G-MLSRQS-LLDHITVQLAPRAAD 745
PD ++ P + ++ +R + +M++ E G + +R+S ++ I APR +
Sbjct: 598 LPD----QY---RPISETDINSIRSQ-PNMRYSETSGRVFARKSDYVNSIIRACAPRVVE 649
Query: 746 ELWCGEGQLSTIWAETADNARSAARTFVL 774
E G L I A++ A A +L
Sbjct: 650 EEMFGIENLCWISAKSTLEASQRAEFLIL 678
>TIGR_CMR|CJE_1085 [details] [associations]
symbol:CJE_1085 "cell division protein FtsH, putative"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0051301 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG0465 GO:GO:0017111 HOGENOM:HOG000217276 KO:K01417
RefSeq:YP_179078.1 ProteinModelPortal:Q5HUF7 SMR:Q5HUF7
STRING:Q5HUF7 GeneID:3231594 KEGG:cjr:CJE1085 PATRIC:20043979
OMA:HRSDERE ProtClustDB:CLSK2395802
BioCyc:CJEJ195099:GJC0-1111-MONOMER Uniprot:Q5HUF7
Length = 538
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 122/305 (40%), Positives = 180/305 (59%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAG 473
++ F+DVAG+ ++++EL E+V F + + Y+ GV+ KTL+AKAVAG
Sbjct: 148 NITFNDVAGVDEVKMELSELVDFLQNPKKYKEFGVKMPKGVLMVGPPGVGKTLIAKAVAG 207
Query: 474 EAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSG 533
EAGV FF S S FVEIYVG+GA RVR L+ +AK APS+VFIDE+DAVG+ RG +
Sbjct: 208 EAGVPFFYQSGSSFVEIYVGMGAKRVRELFSKAKMMAPSIVFIDEIDAVGKARGEMSNV- 266
Query: 534 GQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 593
ERD+TLNQLL +DGFE VI IA+TN+ +++DPAL+R GRFDR+IF+ P R
Sbjct: 267 --ERDSTLNQLLTQMDGFEDNSGVIVIAATNKIELMDPALLRSGRFDRRIFLSLPDFKDR 324
Query: 594 MEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQ 653
++IL+++ + K +++ +A AS+ G GA L +V AAIN +R + D
Sbjct: 325 LKILEIYMKDKNNNINLNKIAKASV--GFSGAGLETLVNEAAINALRRNSALVEESDFYA 382
Query: 654 AAQIEERGMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGY-V 712
G ++E + A +AA A+ A + D+ E +T+ +E + +
Sbjct: 383 VLNKVLLGKKKILSFNNEEKKIQATYQAAKALSAY-YLDI-GFEKITLIEDRFKEYEHNI 440
Query: 713 RMKMD 717
R K +
Sbjct: 441 RSKSE 445
>WB|WBGene00021425 [details] [associations]
symbol:ppgn-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
KO:K09552 EMBL:FO080872 EMBL:AB257343 RefSeq:NP_500191.3
UniGene:Cel.12073 ProteinModelPortal:G5EDB6 SMR:G5EDB6
MEROPS:M41.A12 EnsemblMetazoa:Y38F2AR.7.1
EnsemblMetazoa:Y38F2AR.7.2 GeneID:177021 KEGG:cel:CELE_Y38F2AR.7
CTD:177021 WormBase:Y38F2AR.7 OMA:DKISWSE NextBio:895012
Uniprot:G5EDB6
Length = 747
Score = 481 (174.4 bits), Expect = 2.7e-44, P = 2.7e-44
Identities = 122/351 (34%), Positives = 191/351 (54%)
Query: 410 ERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAK 469
++ + +KF DVAG + ++E+ E V + + + + G + KTLLAK
Sbjct: 277 KKQLKIKFKDVAGCSEAKVEIREFVDYLKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAK 336
Query: 470 AVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLI 529
A+A E+ V F S++ S+FVE+ G+GASR+R L++EA+ AP +++IDE+DA+GR+R
Sbjct: 337 ALAAESTVPFISMNGSEFVEVIGGLGASRIRGLFKEARSRAPCIIYIDEIDAIGRKRSEG 396
Query: 530 KGSGGQ------ERDATLNQLLVCLDGFEGRGN-VITIASTNRPDILDPALVRPGRFDRK 582
G+GG E + TLNQLLV +DG G GN V+ +ASTNR D+LD AL+RPGRFDR
Sbjct: 397 AGAGGGFGGGSGEEEQTLNQLLVEMDGM-GSGNGVVVLASTNRADVLDKALLRPGRFDRH 455
Query: 583 IFIPKPGLIGRMEILKVHARKKPMAD-DVDYLA-VASMTDGMVGAELANIVEVAAINMMR 640
I I P ++ R ++ +++ RK + +Y +A++T G GA++ N+ +AI
Sbjct: 456 ISIDLPTVLERKDMFELYMRKIKLDHAPQEYSQRLAALTPGFTGADIMNVCNESAIRAAS 515
Query: 641 DGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQV-AINEAAMAVVAVNFPDLKNIEFV 699
+ +T D+ A G R E R+V A +EA A+V + V
Sbjct: 516 NKCHVVTHKDMEYALDRVLAGSEKRSRSLVEEEREVVAYHEAGHALVGWMLEHTDALLKV 575
Query: 700 TIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCG 750
TI PR LG+ + + + + S+ L D + + L R A+ L G
Sbjct: 576 TIIPRTSAALGFAQ----YSPRDKHLFSKDELFDRMCMMLGGRCAENLKFG 622
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 437 (158.9 bits), Expect = 2.7e-43, Sum P(2) = 2.7e-43
Identities = 95/248 (38%), Positives = 139/248 (56%)
Query: 410 ERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLA 468
E+G ++ F + GL + EL E+++ + E+++R G++ KTLLA
Sbjct: 174 EQG-EITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLA 232
Query: 469 KAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGL 528
KAVA G NF AS V+ Y+G A +R ++ AK++ P ++F+DE+DA+G R
Sbjct: 233 KAVAATIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFS 292
Query: 529 IKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKP 588
S +E TL +LL +DGF+ G I +TNRPD LDPAL+RPGR DRK+ IP P
Sbjct: 293 EGTSADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLP 352
Query: 589 GLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITT 648
GR+EI K+H K + D+ A M+DG GA++ N A +RD R I
Sbjct: 353 NEAGRLEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADIRNCATEAGFFAIRDDRDHINP 412
Query: 649 DDLLQAAQ 656
DDL++A +
Sbjct: 413 DDLMKAVR 420
Score = 43 (20.2 bits), Expect = 2.7e-43, Sum P(2) = 2.7e-43
Identities = 7/35 (20%), Positives = 17/35 (48%)
Query: 283 QKYEESLQDARDNYRYMANVWENLAKDSTVATGLG 317
++Y++ L+ R N R + +++ D +G
Sbjct: 68 RRYDDQLKQRRQNIRDLEKLYDKTENDIKALQSIG 102
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 458 (166.3 bits), Expect = 2.9e-43, P = 2.9e-43
Identities = 98/244 (40%), Positives = 143/244 (58%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
D+ F+ V GL + EL E+++ + E++ R G++ KTLLA+AVA
Sbjct: 128 DISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVA 187
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
GVNF + +S V+ Y+G A +R ++ AK++ P V+F+DE+DA+G R S
Sbjct: 188 ASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGRRFSEGTS 247
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
+E TL +LL +DGF+ G I +TNRPD LDPAL+RPGR DRKI IP P +G
Sbjct: 248 ADREIQRTLMELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVG 307
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLL 652
RMEILK+H K ++DY A+ +TDG GA+L N+V A +++ R + DL+
Sbjct: 308 RMEILKIHLEKVSKQGEIDYEALVKLTDGTNGADLRNVVTEAGFIAIKEDRDYVIQSDLM 367
Query: 653 QAAQ 656
AA+
Sbjct: 368 SAAR 371
>FB|FBgn0034792 [details] [associations]
symbol:CG3499 species:7227 "Drosophila melanogaster"
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
EMBL:AE013599 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111
TIGRFAMs:TIGR01241 HSSP:Q9LCZ4 GeneTree:ENSGT00550000074836
KO:K08955 EMBL:AY051480 RefSeq:NP_726263.1 UniGene:Dm.4589
SMR:Q9W1Y0 IntAct:Q9W1Y0 MINT:MINT-924656
EnsemblMetazoa:FBtr0071906 GeneID:37636 KEGG:dme:Dmel_CG3499
UCSC:CG3499-RB FlyBase:FBgn0034792 InParanoid:Q9W1Y0
OrthoDB:EOG4Z613M GenomeRNAi:37636 NextBio:804672 Uniprot:Q9W1Y0
Length = 736
Score = 470 (170.5 bits), Expect = 9.2e-43, P = 9.2e-43
Identities = 130/373 (34%), Positives = 192/373 (51%)
Query: 413 VDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
++V F DV G + + EL+E+V+F E + G + KTLLA+AVA
Sbjct: 295 INVTFEDVKGCDEAKQELKEVVEFLKSPEKFSNLGGKLPKGVLLVGPPGTGKTLLARAVA 354
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRER--GLIK 530
GEA V FF + +F E+ VG GA RVR L++ AK AP V+FIDE+D+VG +R ++
Sbjct: 355 GEAKVPFFHAAGPEFDEVLVGQGARRVRDLFKAAKARAPCVIFIDEIDSVGAKRTNSVLH 414
Query: 531 GSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGL 590
Q T+NQLL +DGF VI + +TNR D LD AL+RPGRFD ++ + P
Sbjct: 415 PYANQ----TINQLLSEMDGFHQNAGVIVLGATNRRDDLDQALLRPGRFDVEVMVSTPDF 470
Query: 591 IGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDD 650
GR EIL ++ K + D++D +A T G GA+L N++ AA+ DG ++
Sbjct: 471 TGRKEILSLYLTKI-LHDEIDLDMLARGTSGFTGADLENMINQAALRAAIDGAETVSMKH 529
Query: 651 LLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRE 708
L A G +RK R E A +E A+VA + + VTI PR G
Sbjct: 530 LETARDKVLMGP-ERKARLPDEEANTITAYHEGGHAIVAFYTKESHPLHKVTIMPR-GPS 587
Query: 709 LGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSA 768
LG+ + ++ +++ LL + + RAA+EL G ++++ + A S
Sbjct: 588 LGHTAYIPEKERYH---VTKAQLLAMMDTMMGGRAAEELVFGTDKITSGASSDLKQATSI 644
Query: 769 ARTFVLG-GLSDK 780
A V G+SDK
Sbjct: 645 ATHMVRDWGMSDK 657
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 441 (160.3 bits), Expect = 2.7e-41, P = 2.7e-41
Identities = 100/261 (38%), Positives = 151/261 (57%)
Query: 409 LERGVDVKFSDVAGLG-KIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTL 466
LE + F+ + GL +IR EL E+++ + E+++R G++ KTL
Sbjct: 128 LEDPGQINFAGIGGLNDQIR-ELREVIELPLKNPELFQRVGIKPPKGVLLYGPPGTGKTL 186
Query: 467 LAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRER 526
LA+AVA NF + +S V+ Y+G A +R ++ AK++ P ++F+DE+DA+G R
Sbjct: 187 LARAVASSMETNFLKVVSSAIVDKYIGESARLIREMFGYAKEHEPCIIFMDEIDAIGGRR 246
Query: 527 GLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIP 586
S +E TL +LL LDGF+ G I +TNRPD LDPAL+R GR DRKI IP
Sbjct: 247 FSEGTSADREIQRTLMELLNQLDGFDYLGKTKIIMATNRPDTLDPALLRAGRLDRKIEIP 306
Query: 587 KPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEI 646
P +GR+EILK+H+ M D+D+ +V M+DG+ GA+L N+V A + ++D R I
Sbjct: 307 LPNEVGRLEILKIHSSTVQMEGDIDFESVVKMSDGLNGADLRNVVTEAGLFAIKDYRDAI 366
Query: 647 TTDDLLQAAQ-IEERGMLDRK 666
DD +A + + E L+ K
Sbjct: 367 NQDDFNRAVRKVAEAKKLEGK 387
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 441 (160.3 bits), Expect = 2.7e-41, P = 2.7e-41
Identities = 99/254 (38%), Positives = 144/254 (56%)
Query: 415 VKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAG 473
V ++ + GL + ++ E+V+ + +Y+R G++ KTLLA+A+A
Sbjct: 134 VNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGKTLLARAMAS 193
Query: 474 EAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSG 533
NF I S V+ Y+G A +R ++ AK++ P ++F+DE+DA+G R S
Sbjct: 194 NINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAIGGRRFSQGTSA 253
Query: 534 GQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 593
+E TL +LL LDGFE GNV I +TNRPD+LDPALVRPGR DRKI IP P R
Sbjct: 254 DREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIEIPLPNETAR 313
Query: 594 MEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQ 653
+EILK+HA K D+DY +V + DG GA+L N+ A + +R R + +D +
Sbjct: 314 IEILKIHANKMTKLGDIDYESVCRLCDGFNGADLRNVCTEAGMFAIRAMRDYVIEEDFYK 373
Query: 654 AAQ-IEERGMLDRK 666
AA+ I E L+ K
Sbjct: 374 AARKISEGKKLEGK 387
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 441 (160.3 bits), Expect = 2.7e-41, P = 2.7e-41
Identities = 99/254 (38%), Positives = 144/254 (56%)
Query: 415 VKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAG 473
V ++ + GL + ++ E+V+ + +Y+R G++ KTLLA+A+A
Sbjct: 134 VNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGKTLLARAMAS 193
Query: 474 EAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSG 533
NF I S V+ Y+G A +R ++ AK++ P ++F+DE+DA+G R S
Sbjct: 194 NINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAIGGRRFSQGTSA 253
Query: 534 GQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 593
+E TL +LL LDGFE GNV I +TNRPD+LDPALVRPGR DRKI IP P R
Sbjct: 254 DREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIEIPLPNETAR 313
Query: 594 MEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQ 653
+EILK+HA K D+DY +V + DG GA+L N+ A + +R R + +D +
Sbjct: 314 IEILKIHANKMTKLGDIDYESVCRLCDGFNGADLRNVCTEAGMFAIRAMRDYVIEEDFYK 373
Query: 654 AAQ-IEERGMLDRK 666
AA+ I E L+ K
Sbjct: 374 AARKISEGKKLEGK 387
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 418 (152.2 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
Identities = 93/239 (38%), Positives = 136/239 (56%)
Query: 417 FSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEA 475
++D+ GL E++E V+ TH E+Y G++ KTLLAKAVA E
Sbjct: 192 YADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANET 251
Query: 476 GVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQ 535
F + S+ ++ Y+G G VR +++ A+++APS+VFIDE+DAVG +R G +
Sbjct: 252 SATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYEATSGGER 311
Query: 536 ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRME 595
E T+ +LL LDGF+ RG+V I +TNR D LDPAL+RPGR DRKI +P P +
Sbjct: 312 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTKRR 371
Query: 596 ILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 654
I ++H K M+ DVD D + GA++ I A + +R+ R +IT DL +A
Sbjct: 372 IFQIHTSKMTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLALRERRMKITQADLRKA 430
Score = 38 (18.4 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 35 TPFSCKNQ-NFNPQNEDRNKNQNSKRPHLGLLTIPVT 70
TP N F + ED++K ++ + L ++P++
Sbjct: 4 TPGGMNNPYGFLGKKEDKDKGKDKDKEKKKLESVPIS 40
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 418 (152.2 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
Identities = 93/239 (38%), Positives = 136/239 (56%)
Query: 417 FSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEA 475
++D+ GL E++E V+ TH E+Y G++ KTLLAKAVA E
Sbjct: 192 YADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANET 251
Query: 476 GVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQ 535
F + S+ ++ Y+G G VR +++ A+++APS+VFIDE+DAVG +R G +
Sbjct: 252 SATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYEATSGGER 311
Query: 536 ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRME 595
E T+ +LL LDGF+ RG+V I +TNR D LDPAL+RPGR DRKI +P P +
Sbjct: 312 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTKRR 371
Query: 596 ILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 654
I ++H K M+ DVD D + GA++ I A + +R+ R +IT DL +A
Sbjct: 372 IFQIHTSKMTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLALRERRMKITQADLRKA 430
Score = 38 (18.4 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 35 TPFSCKNQ-NFNPQNEDRNKNQNSKRPHLGLLTIPVT 70
TP N F + ED++K ++ + L ++P++
Sbjct: 4 TPGGMNNPYGFLGKKEDKDKGKDKDKEKKKLESVPIS 40
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 415 (151.1 bits), Expect = 2.9e-40, Sum P(2) = 2.9e-40
Identities = 92/244 (37%), Positives = 136/244 (55%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
++ F+ + GL + EL E+++ + E++ R G++ KTLLAKAVA
Sbjct: 168 EISFNGIGGLTEQIRELREVIELPLKNPELFTRVGIKPPKGVLLYGPPGTGKTLLAKAVA 227
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
G NF AS V+ Y+G A +R ++ AK++ P ++F+DE+DA+G R S
Sbjct: 228 ATIGANFIFSPASAIVDKYIGESARLIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTS 287
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
+E TL +LL +DGF+ G I +TNRPD LDPAL+R GR DRKI I P G
Sbjct: 288 ADREIQRTLMELLNQMDGFDTLGQTKIIMATNRPDTLDPALLRAGRLDRKIEIGLPNEAG 347
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLL 652
R+EI K+H K + D+ A M+DG GA++ N+V A +RD R I +DL+
Sbjct: 348 RLEIFKIHTSKVAKQGEFDFEAAVKMSDGFNGADIRNVVTEAGFFAIRDDRDYILQNDLM 407
Query: 653 QAAQ 656
+A +
Sbjct: 408 KAVR 411
Score = 39 (18.8 bits), Expect = 2.9e-40, Sum P(2) = 2.9e-40
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 48 NEDRNKNQNSKRPHLGLLT 66
N D N NQ+S + G T
Sbjct: 14 NADTNNNQDSNNANAGSTT 32
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 410 (149.4 bits), Expect = 1.8e-39, Sum P(2) = 1.8e-39
Identities = 92/248 (37%), Positives = 141/248 (56%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLL 467
+E+ D + V GL + E++E+++ H E++ G+ KTLL
Sbjct: 170 VEKVPDSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLL 229
Query: 468 AKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG 527
A+AVA F +S S+ V+ Y+G G+ VR L+ A+++APS++F+DE+D++G +R
Sbjct: 230 ARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQR- 288
Query: 528 LIKGS-GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIP 586
I+G G E T+ +LL LDGFE N+ I TNR DILD AL+RPGR DRKI P
Sbjct: 289 -IEGEHGDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDRKIEFP 347
Query: 587 KPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEI 646
P + RMEILK+H+RK + +D L +A+ + GAE+ + A + +R+ R +
Sbjct: 348 NPNVEARMEILKIHSRKMNLMRGIDMLKIATDMNNCSGAEVKAVCTEAGMFALRERRVHV 407
Query: 647 TTDDLLQA 654
T +D A
Sbjct: 408 TQEDFEMA 415
Score = 37 (18.1 bits), Expect = 1.8e-39, Sum P(2) = 1.8e-39
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 40 KNQNFNPQNEDRNKNQNS 57
KN N N D NKN ++
Sbjct: 24 KNME-NNNNNDNNKNSSA 40
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 410 (149.4 bits), Expect = 1.8e-39, Sum P(2) = 1.8e-39
Identities = 92/248 (37%), Positives = 141/248 (56%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLL 467
+E+ D + V GL + E++E+++ H E++ G+ KTLL
Sbjct: 170 VEKVPDSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLL 229
Query: 468 AKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG 527
A+AVA F +S S+ V+ Y+G G+ VR L+ A+++APS++F+DE+D++G +R
Sbjct: 230 ARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQR- 288
Query: 528 LIKGS-GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIP 586
I+G G E T+ +LL LDGFE N+ I TNR DILD AL+RPGR DRKI P
Sbjct: 289 -IEGEHGDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDRKIEFP 347
Query: 587 KPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEI 646
P + RMEILK+H+RK + +D L +A+ + GAE+ + A + +R+ R +
Sbjct: 348 NPNVEARMEILKIHSRKMNLMRGIDMLKIATDMNNCSGAEVKAVCTEAGMFALRERRVHV 407
Query: 647 TTDDLLQA 654
T +D A
Sbjct: 408 TQEDFEMA 415
Score = 37 (18.1 bits), Expect = 1.8e-39, Sum P(2) = 1.8e-39
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 40 KNQNFNPQNEDRNKNQNS 57
KN N N D NKN ++
Sbjct: 24 KNME-NNNNNDNNKNSSA 40
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 424 (154.3 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 92/249 (36%), Positives = 143/249 (57%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLL 467
+E+ D + V GL K E++E+++ H E++ G+ KTLL
Sbjct: 136 VEKIPDSTYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLL 195
Query: 468 AKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG 527
A+AVA F +S S+ V+ Y+G G+ VR L+ A+++APS++F+DE+D++G RG
Sbjct: 196 ARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSSRG 255
Query: 528 LIKGSGGQERDA--TLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFI 585
GSGG + + T+ +LL LDGFE N+ + TNR DILDPAL+RPGR DRKI
Sbjct: 256 E-SGSGGGDSEVQRTMLELLNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKIEF 314
Query: 586 PKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTE 645
P PG GR++ILK+H+RK + ++ ++ +G GAEL + A + +R+ R
Sbjct: 315 PNPGDAGRLDILKIHSRKMNLTRGINLKKISDKMNGASGAELKAVCTEAGMYALRERRVH 374
Query: 646 ITTDDLLQA 654
++ +D A
Sbjct: 375 VSQEDFEMA 383
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 423 (154.0 bits), Expect = 3.0e-39, P = 3.0e-39
Identities = 93/264 (35%), Positives = 149/264 (56%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLL 467
+++ +SD+ GL E++E V+ TH E+Y G++ KTLL
Sbjct: 173 MDKSPTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLL 232
Query: 468 AKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG 527
AKAVA + F I S+ ++ Y+G G R +++ A +NAPS+VFIDE+DA+G +R
Sbjct: 233 AKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRY 292
Query: 528 LIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPK 587
G +E T+ +LL LDGF+ RG+V I +TN+ + LDPAL+RPGR DRKI
Sbjct: 293 DSNSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFEN 352
Query: 588 PGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEIT 647
P L + +IL +H K +++DV+ + + D + GA++ + A + +R+ R ++T
Sbjct: 353 PDLSTKKKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVT 412
Query: 648 TDDLLQAAQIEERGMLDRKERSSE 671
+D QA +ER M ++ E + E
Sbjct: 413 AEDFKQA---KERVMKNKVEENLE 433
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 422 (153.6 bits), Expect = 3.9e-39, P = 3.9e-39
Identities = 94/256 (36%), Positives = 143/256 (55%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLL 467
+E+ D + V GL K E++E+++ H E++ G+ KTLL
Sbjct: 136 VEKIPDSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLL 195
Query: 468 AKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG 527
A+AVA F +S S+ V+ Y+G G+ VR L+ A+++APS++F+DE+D++G R
Sbjct: 196 ARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRS 255
Query: 528 LIKG-SGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIP 586
G SG E T+ +LL LDGFE N+ I +TNR DILDPAL+RPGR DRKI P
Sbjct: 256 DSSGGSGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFP 315
Query: 587 KPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEI 646
P R EIL++H+R + +D ++A +G GAEL + A + +R+ R +
Sbjct: 316 PPSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALRERRVHV 375
Query: 647 TTDDL-LQAAQIEERG 661
T +D L A++ +G
Sbjct: 376 TQEDFELAVAKVLNKG 391
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 421 (153.3 bits), Expect = 5.1e-39, P = 5.1e-39
Identities = 94/251 (37%), Positives = 143/251 (56%)
Query: 415 VKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAG 473
V + D+ GL ++ EL+E+V++ H + + + G+ KTLLAKA+A
Sbjct: 206 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 265
Query: 474 EAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSG 533
E NF SI + + ++ G + VR ++ +A+ AP V+F DELD++ + RG G G
Sbjct: 266 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 325
Query: 534 GQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 593
G D +NQ+L +DG + NV I +TNRPDI+DPA++RPGR D+ I+IP P R
Sbjct: 326 GGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 385
Query: 594 MEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG-RTEITTDDLL 652
+ ILK + RK P+A DVD +A MT+G GA+L I + A +R+ +EI +
Sbjct: 386 VAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERER 445
Query: 653 Q----AAQIEE 659
Q A ++EE
Sbjct: 446 QTNPSAMEVEE 456
Score = 329 (120.9 bits), Expect = 6.1e-27, P = 6.1e-27
Identities = 92/255 (36%), Positives = 141/255 (55%)
Query: 483 SASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLN 542
S + + G S +R ++EA+ NAP+++FIDELDA+ +R K G ER ++
Sbjct: 2 SGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKRE--KTHGEVER-RIVS 58
Query: 543 QLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHAR 602
QLL +DG + R +VI +A+TNRP+ +DPAL R GRFDR++ I P GR+EIL++H +
Sbjct: 59 QLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTK 118
Query: 603 KKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEER-- 660
+ADDVD V + T G VGA+LA + AA+ +R I +D A++
Sbjct: 119 NMKLADDVDLEQVGNETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLA 178
Query: 661 -GMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHM 719
M D + S++ A+ E + V V + D+ +E V R +EL V+ ++H
Sbjct: 179 VTMDDFRWALSQS-NPSALRETVVEVPQVTWEDIGGLEDVK---RELQEL--VQYPVEHP 232
Query: 720 -KF-KEGMLSRQSLL 732
KF K GM + +L
Sbjct: 233 DKFLKFGMTPSKGVL 247
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 421 (153.3 bits), Expect = 5.1e-39, P = 5.1e-39
Identities = 92/244 (37%), Positives = 140/244 (57%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
++ +SDV GL + EL E+V+ + E+++R G+ KTLLA+AVA
Sbjct: 146 NISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVA 205
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
+ NF + +S V+ Y+G A +R ++ A+D+ P +VF+DE+DA+G R S
Sbjct: 206 SQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTS 265
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
+E TL +LL LDGF+ G V I +TNRPD LDPAL+RPGR DRKI I P
Sbjct: 266 ADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQS 325
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLL 652
R+EILK+H+ K ++D+ AV ++DG A+L N+ A + +R R + +D +
Sbjct: 326 RLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVIDEDFM 385
Query: 653 QAAQ 656
+A +
Sbjct: 386 KAVR 389
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 421 (153.3 bits), Expect = 5.1e-39, P = 5.1e-39
Identities = 92/244 (37%), Positives = 140/244 (57%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
++ +SDV GL + EL E+V+ + E+++R G+ KTLLA+AVA
Sbjct: 146 NISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVA 205
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
+ NF + +S V+ Y+G A +R ++ A+D+ P +VF+DE+DA+G R S
Sbjct: 206 SQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTS 265
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
+E TL +LL LDGF+ G V I +TNRPD LDPAL+RPGR DRKI I P
Sbjct: 266 ADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQS 325
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLL 652
R+EILK+H+ K ++D+ AV ++DG A+L N+ A + +R R + +D +
Sbjct: 326 RLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVIDEDFM 385
Query: 653 QAAQ 656
+A +
Sbjct: 386 KAVR 389
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 419 (152.6 bits), Expect = 8.5e-39, P = 8.5e-39
Identities = 95/256 (37%), Positives = 145/256 (56%)
Query: 414 DVKFSDVAGL-GKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAV 471
DV +S + GL +IR EL E+++ + E++ R G+ KTLLA+AV
Sbjct: 137 DVTYSAIGGLTDQIR-ELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLARAV 195
Query: 472 AGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKG 531
A + NF + +S V+ Y+G A +R ++ A+D+ P ++F+DE+DA+G R
Sbjct: 196 ASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT 255
Query: 532 SGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLI 591
S +E TL +LL +DGF+ G V I +TNRPD LDPAL+RPGR DRKI IP P
Sbjct: 256 SADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDSLDPALLRPGRLDRKIEIPLPNEQ 315
Query: 592 GRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDL 651
R+EILK+HA K ++DY A+ ++D GA+L N+ A + +R R + D
Sbjct: 316 ARLEILKIHALKIAKHGEIDYEAIVKLSDNFNGADLRNVCTEAGLFAIRAEREYVIQGDF 375
Query: 652 LQAAQ-IEERGMLDRK 666
++A + + + L+ K
Sbjct: 376 MKAVRKVSDNKKLESK 391
>FB|FBgn0036224 [details] [associations]
symbol:Rpt4R "Regulatory particle triple-A ATPase 4-related"
species:7227 "Drosophila melanogaster" [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014296
GO:GO:0006200 GO:GO:0006974 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 EMBL:AY089267 RefSeq:NP_648525.1
UniGene:Dm.5141 SMR:Q9VTQ9 IntAct:Q9VTQ9 MINT:MINT-869141
STRING:Q9VTQ9 EnsemblMetazoa:FBtr0076040 GeneID:39351
KEGG:dme:Dmel_CG7257 UCSC:CG7257-RA CTD:39351 FlyBase:FBgn0036224
InParanoid:Q9VTQ9 OMA:CAIWTEA OrthoDB:EOG4VT4CM GenomeRNAi:39351
NextBio:813228 Uniprot:Q9VTQ9
Length = 398
Score = 419 (152.6 bits), Expect = 8.5e-39, P = 8.5e-39
Identities = 92/258 (35%), Positives = 146/258 (56%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
+V ++++ GLG+ EL E+++ + +++ R G+ KTLLA+A+A
Sbjct: 138 NVNYAEIGGLGQQIRELREVIELPLLNPDIFLRVGISPPKGCLLYGPPGTGKTLLARAIA 197
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
+ NF + +S V+ Y+G A +R ++ A+D+ P ++F+DE+DA+G R S
Sbjct: 198 SQMDANFLKVVSSAIVDKYIGESARLIREMFAYARDHQPCIIFMDEIDAIGGRRFSEGTS 257
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
+E TL +LL +DGF+ G V I +TNRPD LDPAL+RPGR DRK+ IP P +
Sbjct: 258 ADREIQRTLMELLNQMDGFDALGQVKMIMATNRPDTLDPALLRPGRLDRKLEIPLPNEVA 317
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLL 652
RM+ILK+HA ++DY AV ++D GA+L NI A + +R R + +D +
Sbjct: 318 RMDILKIHAEPLNKRGEIDYEAVVKLSDLFNGADLRNICTEAGLFALRCDREFVIQEDFM 377
Query: 653 QAAQIEERGMLDRKERSS 670
+A R + D K+ S
Sbjct: 378 KAV----RKIADNKKLES 391
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 417 (151.9 bits), Expect = 1.4e-38, P = 1.4e-38
Identities = 96/245 (39%), Positives = 140/245 (57%)
Query: 410 ERGVDVKFSDVAGLGKIRLEL-EEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLA 468
ER + ++SD+ GL K EL E IV H E + G++ KTLLA
Sbjct: 144 ERPTE-QYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLA 202
Query: 469 KAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGL 528
+A A + F ++ Q V++++G GA VR + AK+ APS++FIDELDA+G +R
Sbjct: 203 RACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELDAIGNKRFD 262
Query: 529 IKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKP 588
+ +G +E T+ +LL LDGF+ V IA+TNR DILDPAL+R GR DRKI P P
Sbjct: 263 SEKAGDREVQRTMLELLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMP 322
Query: 589 GLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITT 648
R I+++H+RK ++ DV+Y +A TD GA+ + A I +R G TE+T
Sbjct: 323 NEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGIIALRRGATELTH 382
Query: 649 DDLLQ 653
+D ++
Sbjct: 383 EDYME 387
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 416 (151.5 bits), Expect = 1.8e-38, P = 1.8e-38
Identities = 93/254 (36%), Positives = 141/254 (55%)
Query: 415 VKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAG 473
V + ++ GL EL E+V+ E++ R G++ KTLLA+A+A
Sbjct: 134 VSYGEIGGLSNQIRELREVVELPLMIPELFIRVGIKAPKGVLLYGPPGTGKTLLARAIAS 193
Query: 474 EAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSG 533
NF + +S V+ Y+G A +R ++ A+D+ P V+F+DE+DA+G R S
Sbjct: 194 NLEANFLKVVSSAIVDKYIGESARVIREMFGYARDHQPCVIFMDEIDAIGGRRFSEGTSA 253
Query: 534 GQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 593
+E TL +LL +DGF+ V I +TNRPD+LDPAL+RPGR DRKI IP P GR
Sbjct: 254 DREIQRTLMELLNQMDGFDTLSKVKIIMATNRPDVLDPALLRPGRLDRKIEIPLPNEAGR 313
Query: 594 MEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQ 653
+++LK+HA DVDY A+A + DG A+L N+ A + +R R + +D ++
Sbjct: 314 VDVLKIHAANITKHGDVDYEAIAKLADGFNAADLRNVCTEAGMFAIRAERDYVMEEDFMK 373
Query: 654 AAQ-IEERGMLDRK 666
A + +E L+ K
Sbjct: 374 AVRKCQEAKKLEGK 387
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 416 (151.5 bits), Expect = 1.8e-38, P = 1.8e-38
Identities = 92/246 (37%), Positives = 142/246 (57%)
Query: 417 FSDVAGLGKIRLEL-EEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEA 475
+SDV GL K EL E IV + ++ G+R KTLLA+A A +
Sbjct: 180 YSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLARACAAQT 239
Query: 476 GVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQ 535
F ++A Q V++Y+G GA VR + AK+ AP+++FIDELDA+G +R + SG +
Sbjct: 240 NATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEKSGDR 299
Query: 536 ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRME 595
E T+ +LL LDGF V +A+TNR D+LDPAL+R GR DRKI P P R +
Sbjct: 300 EVQRTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDSRAQ 359
Query: 596 ILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA- 654
IL++H+RK DD+++ +A TD GA+L + A + +R+G++ + +D ++
Sbjct: 360 ILQIHSRKMTTDDDINWQELARSTDEFNGAQLKAVTVEAGMIALRNGQSSVKHEDFVEGI 419
Query: 655 AQIEER 660
++++ R
Sbjct: 420 SEVQAR 425
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 415 (151.1 bits), Expect = 2.4e-38, P = 2.4e-38
Identities = 93/269 (34%), Positives = 151/269 (56%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLL 467
+E+ D + V GL K E++E+++ H E++ G+ KTLL
Sbjct: 139 VEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 198
Query: 468 AKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG 527
A+AVA F +S S+ V+ ++G G+ VR L+ A+++APS++F+DE+D++G R
Sbjct: 199 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSR- 257
Query: 528 LIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIP 586
+ GSGG E T+ +LL LDGFE N+ I +TNR DILDPAL+RPGR DRKI P
Sbjct: 258 IESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFP 317
Query: 587 KPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEI 646
P R++ILK+H+RK + ++ +A + G GAE+ + A + +R+ R +
Sbjct: 318 PPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHV 377
Query: 647 TTDDLLQA-AQIEERGMLDRKERSSETWR 674
T +D A A++ ++ ++ + W+
Sbjct: 378 TQEDFEMAVAKVMQKDS-EKNMSIKKLWK 405
>WB|WBGene00015688 [details] [associations]
symbol:C10G11.8 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 HSSP:Q9LCZ4 EMBL:FO080499 PIR:D87802
RefSeq:NP_491811.1 ProteinModelPortal:P91025 SMR:P91025
STRING:P91025 PaxDb:P91025 EnsemblMetazoa:C10G11.8 GeneID:172324
KEGG:cel:CELE_C10G11.8 UCSC:C10G11.8 CTD:172324 WormBase:C10G11.8
InParanoid:P91025 OMA:RGIENAN NextBio:875027 Uniprot:P91025
Length = 438
Score = 396 (144.5 bits), Expect = 2.8e-38, Sum P(2) = 2.8e-38
Identities = 97/241 (40%), Positives = 125/241 (51%)
Query: 417 FSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEA 475
F D+ G EL+E V+ TH E Y G+ KTLLAKAVA
Sbjct: 182 FDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKGVILYGEPGTGKTLLAKAVANST 241
Query: 476 GVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQ 535
F + S V+ G GA VR ++Q AK+ APS+VFIDE+DAVG +R G Q
Sbjct: 242 SATFIRATGSDLVQKQSGEGARLVRQIFQMAKEQAPSIVFIDEIDAVGTKRFDTSSRGEQ 301
Query: 536 ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRME 595
E TL +LL LDGFE RG+V I +TNR D LDPAL+RPGR DRKI +PKP R +
Sbjct: 302 EVQRTLLELLNQLDGFESRGDVKIIMATNRIDSLDPALIRPGRIDRKIELPKPDEKTRQK 361
Query: 596 ILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAA 655
I +H + V Y V + GAE+ + A + +R R + TDD +A
Sbjct: 362 IFTIHTSGMTIQKAVTYENVLGKEKSISGAEIKAVCTEAGMLALRAQRKCVGTDDFEKAV 421
Query: 656 Q 656
+
Sbjct: 422 K 422
Score = 41 (19.5 bits), Expect = 2.8e-38, Sum P(2) = 2.8e-38
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 108 EQLKKWSKDLPIVSDRIAYTEIFSLKDEGKLKHVIKSPSGSLRQKAEPVLVVLEDSRVLR 167
+QL + + P R+ E+F DE KH + GS R+ P+L ++ D +LR
Sbjct: 86 QQLVQSLRGTPTTLARVH--ELFD--DE---KHAVVVVEGSRREWYVPILSIV-DKDLLR 137
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 414 (150.8 bits), Expect = 3.1e-38, P = 3.1e-38
Identities = 93/245 (37%), Positives = 140/245 (57%)
Query: 414 DVKFSDVAGLG-KIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAV 471
+V +S V GL +IR EL E ++ + E++ R G++ KTLLA+A+
Sbjct: 136 NVSYSAVGGLSDQIR-ELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAI 194
Query: 472 AGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKG 531
A NF I +S ++ Y+G A +R ++ A+D+ P ++F+DE+DA+G R
Sbjct: 195 ASNIDANFLKIVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT 254
Query: 532 SGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLI 591
S +E TL +LL LDGF+ G V I +TNRPD+LDPAL+RPGR DRKI IP P
Sbjct: 255 SADREIQRTLMELLNQLDGFDELGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQ 314
Query: 592 GRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDL 651
RME+LK+HA ++DY AV + +G GA+L N+ A + +R R + +D
Sbjct: 315 ARMEVLKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMAAIRAERDYVVHEDF 374
Query: 652 LQAAQ 656
++A +
Sbjct: 375 MKAVR 379
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 414 (150.8 bits), Expect = 3.1e-38, P = 3.1e-38
Identities = 91/245 (37%), Positives = 141/245 (57%)
Query: 414 DVKFSDVAGLG-KIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAV 471
++ +S V GLG +IR EL E ++ + E++ R G++ KTLLA+A+
Sbjct: 135 NISYSAVGGLGDQIR-ELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAI 193
Query: 472 AGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKG 531
A NF + +S ++ Y+G A +R ++ A+++ P ++F+DE+DA+G R
Sbjct: 194 ASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGT 253
Query: 532 SGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLI 591
S +E TL +LL LDGF+ G V I +TNRPD+LDPAL+RPGR DRKI IP P
Sbjct: 254 SADREIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQ 313
Query: 592 GRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDL 651
RM+ILK+HA ++DY A+ + +G GA+L NI A + +R R + +D
Sbjct: 314 SRMDILKIHAAGIAKHGEIDYEAIVKLAEGFNGADLRNICTEAGMFAIRAERDYVIHEDF 373
Query: 652 LQAAQ 656
++A +
Sbjct: 374 MKAVR 378
>RGD|727940 [details] [associations]
symbol:Spg7 "spastic paraplegia 7 homolog (human)" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA;ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA;ISO] [GO:0008089
"anterograde axon cargo transport" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0031966
"mitochondrial membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 SMART:SM00382 RGD:727940
GO:GO:0016021 GO:GO:0005524 GO:GO:0031966 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 GO:GO:0017111 HSSP:Q9WZ49 MEROPS:M41.006
CTD:6687 KO:K09552 EMBL:AY278739 IPI:IPI00327108 RefSeq:NP_852053.1
UniGene:Rn.16437 ProteinModelPortal:Q7TT47 SMR:Q7TT47 STRING:Q7TT47
PRIDE:Q7TT47 Ensembl:ENSRNOT00000047754 GeneID:353231
KEGG:rno:353231 UCSC:RGD:727940 NextBio:672619 ArrayExpress:Q7TT47
Genevestigator:Q7TT47 Uniprot:Q7TT47
Length = 744
Score = 406 (148.0 bits), Expect = 3.7e-38, Sum P(2) = 3.7e-38
Identities = 91/216 (42%), Positives = 129/216 (59%)
Query: 412 GVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAV 471
G V F DVAG+ + +LE+ E V + E + + G + KTLLAKAV
Sbjct: 303 GKGVSFQDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAV 362
Query: 472 AGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGL-IK 530
A EA V F +++ +FVE+ G+GA+RVRSL++EA+ AP +V+IDE+DAVG++R +
Sbjct: 363 ATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTSMS 422
Query: 531 GSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGL 590
G E + TLNQLLV +DG +VI +ASTNR D+LD AL+RPGR DR +FI P L
Sbjct: 423 GFSNTEEEQTLNQLLVEMDGMGTADHVIVLASTNRADVLDNALMRPGRLDRHVFIDLPTL 482
Query: 591 IGRMEILKVHARKKPMADDVDYLA--VASMTDGMVG 624
R EI + H + + + + +A +T G G
Sbjct: 483 QERREIFEQHLKGLKLTQPSSFYSQRLAELTPGFSG 518
Score = 72 (30.4 bits), Expect = 3.7e-38, Sum P(2) = 3.7e-38
Identities = 25/102 (24%), Positives = 47/102 (46%)
Query: 669 SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSR 728
S E R VA +E+ A+V + + V+IAPR LG+ +M + + + ++
Sbjct: 527 SKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQM----LPRDQYLFTK 582
Query: 729 QSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAAR 770
+ L + + + L RAA+ + S + + D+ R R
Sbjct: 583 EQLFERMCMALGGRAAEAI-----SFSRVTSGAQDDLRKVTR 619
>UNIPROTKB|Q7TT47 [details] [associations]
symbol:Spg7 "Paraplegin" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 RGD:727940 GO:GO:0016021 GO:GO:0005524
GO:GO:0031966 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 eggNOG:COG0465 GeneTree:ENSGT00530000063070
HOGENOM:HOG000217277 HOVERGEN:HBG050184 GO:GO:0017111 HSSP:Q9WZ49
MEROPS:M41.006 CTD:6687 KO:K09552 EMBL:AY278739 IPI:IPI00327108
RefSeq:NP_852053.1 UniGene:Rn.16437 ProteinModelPortal:Q7TT47
SMR:Q7TT47 STRING:Q7TT47 PRIDE:Q7TT47 Ensembl:ENSRNOT00000047754
GeneID:353231 KEGG:rno:353231 UCSC:RGD:727940 NextBio:672619
ArrayExpress:Q7TT47 Genevestigator:Q7TT47 Uniprot:Q7TT47
Length = 744
Score = 406 (148.0 bits), Expect = 3.7e-38, Sum P(2) = 3.7e-38
Identities = 91/216 (42%), Positives = 129/216 (59%)
Query: 412 GVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAV 471
G V F DVAG+ + +LE+ E V + E + + G + KTLLAKAV
Sbjct: 303 GKGVSFQDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAV 362
Query: 472 AGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGL-IK 530
A EA V F +++ +FVE+ G+GA+RVRSL++EA+ AP +V+IDE+DAVG++R +
Sbjct: 363 ATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTSMS 422
Query: 531 GSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGL 590
G E + TLNQLLV +DG +VI +ASTNR D+LD AL+RPGR DR +FI P L
Sbjct: 423 GFSNTEEEQTLNQLLVEMDGMGTADHVIVLASTNRADVLDNALMRPGRLDRHVFIDLPTL 482
Query: 591 IGRMEILKVHARKKPMADDVDYLA--VASMTDGMVG 624
R EI + H + + + + +A +T G G
Sbjct: 483 QERREIFEQHLKGLKLTQPSSFYSQRLAELTPGFSG 518
Score = 72 (30.4 bits), Expect = 3.7e-38, Sum P(2) = 3.7e-38
Identities = 25/102 (24%), Positives = 47/102 (46%)
Query: 669 SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSR 728
S E R VA +E+ A+V + + V+IAPR LG+ +M + + + ++
Sbjct: 527 SKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQM----LPRDQYLFTK 582
Query: 729 QSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAAR 770
+ L + + + L RAA+ + S + + D+ R R
Sbjct: 583 EQLFERMCMALGGRAAEAI-----SFSRVTSGAQDDLRKVTR 619
>CGD|CAL0005257 [details] [associations]
symbol:RPT2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA] [GO:0043171 "peptide
catabolic process" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005257 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000051 EMBL:AACQ01000050
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03062 RefSeq:XP_717718.1
RefSeq:XP_717812.1 ProteinModelPortal:Q5A7M6 STRING:Q5A7M6
GeneID:3640525 GeneID:3640683 KEGG:cal:CaO19.12895
KEGG:cal:CaO19.5440 Uniprot:Q5A7M6
Length = 465
Score = 413 (150.4 bits), Expect = 4.0e-38, P = 4.0e-38
Identities = 92/264 (34%), Positives = 146/264 (55%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLL 467
L++ ++D+ GL E++E V+ TH E+Y G++ KTLL
Sbjct: 177 LDKSPTESYADIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLL 236
Query: 468 AKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG 527
AKAVA + F I S+ ++ Y+G G R ++Q A D+APS+VFIDE+DA+G +R
Sbjct: 237 AKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFQIAADHAPSIVFIDEIDAIGTKRY 296
Query: 528 LIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPK 587
G +E T+ +LL LDGF+ RG++ I +TN+ + LDPAL+RPGR DRKI
Sbjct: 297 ESTSGGEREIQRTMLELLNQLDGFDDRGDIKVIMATNKIESLDPALIRPGRIDRKILFEN 356
Query: 588 PGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEIT 647
P + +IL +H K +ADDV+ + + D + GA++ I A + +R+ R ++
Sbjct: 357 PDANTKKKILTIHTSKMSLADDVNLDEIVTGKDDLSGADIKAICTEAGLLALRERRMQVK 416
Query: 648 TDDLLQAAQIEERGMLDRKERSSE 671
+D A +ER + ++ E + E
Sbjct: 417 AEDFKSA---KERVLKNKVEENLE 437
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 413 (150.4 bits), Expect = 4.0e-38, P = 4.0e-38
Identities = 95/245 (38%), Positives = 140/245 (57%)
Query: 410 ERGVDVKFSDVAGLGKIRLEL-EEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLA 468
ER + ++SD+ GL K EL E IV H E + G++ KTLLA
Sbjct: 125 ERPTE-QYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLA 183
Query: 469 KAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGL 528
+A A + F ++ Q V++++G GA VR + AK+ APS++FIDELDA+G +R
Sbjct: 184 RACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFD 243
Query: 529 IKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKP 588
+ +G +E T+ +LL LDGF+ V IA+TNR DILDPAL+R GR DRKI P P
Sbjct: 244 SEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMP 303
Query: 589 GLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITT 648
R I+++H+RK ++ DV+Y +A TD GA+ + A + +R G TE+T
Sbjct: 304 NEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTH 363
Query: 649 DDLLQ 653
+D ++
Sbjct: 364 EDYME 368
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 413 (150.4 bits), Expect = 4.0e-38, P = 4.0e-38
Identities = 95/245 (38%), Positives = 140/245 (57%)
Query: 410 ERGVDVKFSDVAGLGKIRLEL-EEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLA 468
ER + ++SD+ GL K EL E IV H E + G++ KTLLA
Sbjct: 129 ERPTE-QYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLA 187
Query: 469 KAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGL 528
+A A + F ++ Q V++++G GA VR + AK+ APS++FIDELDA+G +R
Sbjct: 188 RACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFD 247
Query: 529 IKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKP 588
+ +G +E T+ +LL LDGF+ V IA+TNR DILDPAL+R GR DRKI P P
Sbjct: 248 SEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMP 307
Query: 589 GLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITT 648
R I+++H+RK ++ DV+Y +A TD GA+ + A + +R G TE+T
Sbjct: 308 NEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTH 367
Query: 649 DDLLQ 653
+D ++
Sbjct: 368 EDYME 372
>UNIPROTKB|F1PBK7 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
Length = 439
Score = 413 (150.4 bits), Expect = 4.0e-38, P = 4.0e-38
Identities = 95/245 (38%), Positives = 140/245 (57%)
Query: 410 ERGVDVKFSDVAGLGKIRLEL-EEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLA 468
ER + ++SD+ GL K EL E IV H E + G++ KTLLA
Sbjct: 179 ERPTE-QYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLA 237
Query: 469 KAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGL 528
+A A + F ++ Q V++++G GA VR + AK+ APS++FIDELDA+G +R
Sbjct: 238 RACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFD 297
Query: 529 IKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKP 588
+ +G +E T+ +LL LDGF+ V IA+TNR DILDPAL+R GR DRKI P P
Sbjct: 298 SEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMP 357
Query: 589 GLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITT 648
R I+++H+RK ++ DV+Y +A TD GA+ + A + +R G TE+T
Sbjct: 358 NEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTH 417
Query: 649 DDLLQ 653
+D ++
Sbjct: 418 EDYME 422
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 413 (150.4 bits), Expect = 4.0e-38, P = 4.0e-38
Identities = 95/245 (38%), Positives = 140/245 (57%)
Query: 410 ERGVDVKFSDVAGLGKIRLEL-EEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLA 468
ER + ++SD+ GL K EL E IV H E + G++ KTLLA
Sbjct: 137 ERPTE-QYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLA 195
Query: 469 KAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGL 528
+A A + F ++ Q V++++G GA VR + AK+ APS++FIDELDA+G +R
Sbjct: 196 RACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFD 255
Query: 529 IKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKP 588
+ +G +E T+ +LL LDGF+ V IA+TNR DILDPAL+R GR DRKI P P
Sbjct: 256 SEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMP 315
Query: 589 GLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITT 648
R I+++H+RK ++ DV+Y +A TD GA+ + A + +R G TE+T
Sbjct: 316 NEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTH 375
Query: 649 DDLLQ 653
+D ++
Sbjct: 376 EDYME 380
>UNIPROTKB|P17980 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
Length = 439
Score = 413 (150.4 bits), Expect = 4.0e-38, P = 4.0e-38
Identities = 95/245 (38%), Positives = 140/245 (57%)
Query: 410 ERGVDVKFSDVAGLGKIRLEL-EEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLA 468
ER + ++SD+ GL K EL E IV H E + G++ KTLLA
Sbjct: 179 ERPTE-QYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLA 237
Query: 469 KAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGL 528
+A A + F ++ Q V++++G GA VR + AK+ APS++FIDELDA+G +R
Sbjct: 238 RACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFD 297
Query: 529 IKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKP 588
+ +G +E T+ +LL LDGF+ V IA+TNR DILDPAL+R GR DRKI P P
Sbjct: 298 SEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMP 357
Query: 589 GLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITT 648
R I+++H+RK ++ DV+Y +A TD GA+ + A + +R G TE+T
Sbjct: 358 NEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTH 417
Query: 649 DDLLQ 653
+D ++
Sbjct: 418 EDYME 422
>UNIPROTKB|F1SID4 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:CU856312
Ensembl:ENSSSCT00000014459 Uniprot:F1SID4
Length = 446
Score = 413 (150.4 bits), Expect = 4.0e-38, P = 4.0e-38
Identities = 95/245 (38%), Positives = 140/245 (57%)
Query: 410 ERGVDVKFSDVAGLGKIRLEL-EEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLA 468
ER + ++SD+ GL K EL E IV H E + G++ KTLLA
Sbjct: 186 ERPTE-QYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLA 244
Query: 469 KAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGL 528
+A A + F ++ Q V++++G GA VR + AK+ APS++FIDELDA+G +R
Sbjct: 245 RACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFD 304
Query: 529 IKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKP 588
+ +G +E T+ +LL LDGF+ V IA+TNR DILDPAL+R GR DRKI P P
Sbjct: 305 SEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMP 364
Query: 589 GLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITT 648
R I+++H+RK ++ DV+Y +A TD GA+ + A + +R G TE+T
Sbjct: 365 NEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTH 424
Query: 649 DDLLQ 653
+D ++
Sbjct: 425 EDYME 429
>MGI|MGI:1098754 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
NextBio:295874 Bgee:O88685 Genevestigator:O88685
GermOnline:ENSMUSG00000002102 Uniprot:O88685
Length = 442
Score = 413 (150.4 bits), Expect = 4.0e-38, P = 4.0e-38
Identities = 95/245 (38%), Positives = 140/245 (57%)
Query: 410 ERGVDVKFSDVAGLGKIRLEL-EEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLA 468
ER + ++SD+ GL K EL E IV H E + G++ KTLLA
Sbjct: 182 ERPTE-QYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLA 240
Query: 469 KAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGL 528
+A A + F ++ Q V++++G GA VR + AK+ APS++FIDELDA+G +R
Sbjct: 241 RACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFD 300
Query: 529 IKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKP 588
+ +G +E T+ +LL LDGF+ V IA+TNR DILDPAL+R GR DRKI P P
Sbjct: 301 SEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMP 360
Query: 589 GLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITT 648
R I+++H+RK ++ DV+Y +A TD GA+ + A + +R G TE+T
Sbjct: 361 NEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTH 420
Query: 649 DDLLQ 653
+D ++
Sbjct: 421 EDYME 425
>RGD|61905 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit, ATPase
3" species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0001824 "blastocyst development"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA;ISO;ISS]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:61905 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0030163 GO:GO:0017111
GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
KO:K03065 GO:GO:0022624 CTD:5702 EMBL:D83522 EMBL:U77918
IPI:IPI00421528 RefSeq:NP_113783.1 UniGene:Rn.11173
ProteinModelPortal:Q63569 IntAct:Q63569 STRING:Q63569
PhosphoSite:Q63569 PRIDE:Q63569 GeneID:29677 KEGG:rno:29677
UCSC:RGD:61905 NextBio:610019 ArrayExpress:Q63569
Genevestigator:Q63569 GermOnline:ENSRNOG00000011414 Uniprot:Q63569
Length = 439
Score = 413 (150.4 bits), Expect = 4.0e-38, P = 4.0e-38
Identities = 95/245 (38%), Positives = 140/245 (57%)
Query: 410 ERGVDVKFSDVAGLGKIRLEL-EEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLA 468
ER + ++SD+ GL K EL E IV H E + G++ KTLLA
Sbjct: 179 ERPTE-QYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLA 237
Query: 469 KAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGL 528
+A A + F ++ Q V++++G GA VR + AK+ APS++FIDELDA+G +R
Sbjct: 238 RACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFD 297
Query: 529 IKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKP 588
+ +G +E T+ +LL LDGF+ V IA+TNR DILDPAL+R GR DRKI P P
Sbjct: 298 SEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMP 357
Query: 589 GLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITT 648
R I+++H+RK ++ DV+Y +A TD GA+ + A + +R G TE+T
Sbjct: 358 NEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTH 417
Query: 649 DDLLQ 653
+D ++
Sbjct: 418 EDYME 422
>UNIPROTKB|Q6P6U2 [details] [associations]
symbol:Psmc3 "26S protease regulatory subunit 6A"
species:10116 "Rattus norvegicus" [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:61905 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:CH473949
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
IPI:IPI00421528 UniGene:Rn.11173 EMBL:BC062019 SMR:Q6P6U2
IntAct:Q6P6U2 STRING:Q6P6U2 Ensembl:ENSRNOT00000015757
Genevestigator:Q6P6U2 Uniprot:Q6P6U2
Length = 442
Score = 413 (150.4 bits), Expect = 4.0e-38, P = 4.0e-38
Identities = 95/245 (38%), Positives = 140/245 (57%)
Query: 410 ERGVDVKFSDVAGLGKIRLEL-EEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLA 468
ER + ++SD+ GL K EL E IV H E + G++ KTLLA
Sbjct: 182 ERPTE-QYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLA 240
Query: 469 KAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGL 528
+A A + F ++ Q V++++G GA VR + AK+ APS++FIDELDA+G +R
Sbjct: 241 RACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFD 300
Query: 529 IKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKP 588
+ +G +E T+ +LL LDGF+ V IA+TNR DILDPAL+R GR DRKI P P
Sbjct: 301 SEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMP 360
Query: 589 GLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITT 648
R I+++H+RK ++ DV+Y +A TD GA+ + A + +R G TE+T
Sbjct: 361 NEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTH 420
Query: 649 DDLLQ 653
+D ++
Sbjct: 421 EDYME 425
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 413 (150.4 bits), Expect = 4.0e-38, P = 4.0e-38
Identities = 92/245 (37%), Positives = 141/245 (57%)
Query: 414 DVKFSDVAGLG-KIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAV 471
++ +S V GLG +IR EL E ++ + E++ R G++ KTLLA+A+
Sbjct: 135 NISYSAVGGLGDQIR-ELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAI 193
Query: 472 AGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKG 531
A NF + +S ++ Y+G A +R ++ A+++ P ++F+DE+DA+G R
Sbjct: 194 ASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGT 253
Query: 532 SGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLI 591
S +E TL +LL LDGF+ G V I +TNRPD+LDPAL+RPGR DRKI IP P
Sbjct: 254 SADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQ 313
Query: 592 GRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDL 651
RMEILK+HA ++DY A+ + +G GA+L NI A + +R R + +D
Sbjct: 314 SRMEILKIHASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGMFAIRAERDYVIHEDF 373
Query: 652 LQAAQ 656
++A +
Sbjct: 374 MKAVR 378
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 412 (150.1 bits), Expect = 5.1e-38, P = 5.1e-38
Identities = 90/251 (35%), Positives = 141/251 (56%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLL 467
+E+ D + + GL + E++E+++ H E++ G+ KTLL
Sbjct: 123 VEKVPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLL 182
Query: 468 AKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG 527
A+AVA F +S S+ V+ Y+G G+ VR L+ A+++APS++F+DE+D++G R
Sbjct: 183 ARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRI 242
Query: 528 LIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPK 587
GSG E T+ +LL LDGFE N+ I +TNR DILDPAL+RPGR DRKI P
Sbjct: 243 DSAGSGDSEVQRTMLELLNQLDGFEPTKNIKIIMATNRLDILDPALLRPGRIDRKIEFPP 302
Query: 588 PGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEIT 647
P + R +IL++H+R + ++ +A +G GAEL + A + +R+ R +T
Sbjct: 303 PSVEARADILRIHSRSMNLTRGINLTKIAEKMNGCSGAELKGVCTEAGMYALRERRVHVT 362
Query: 648 TDDL-LQAAQI 657
+D L A+I
Sbjct: 363 QEDFDLATAKI 373
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 412 (150.1 bits), Expect = 5.1e-38, P = 5.1e-38
Identities = 93/269 (34%), Positives = 150/269 (55%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLL 467
+E+ D + + GL K E++E+++ H E++ G+ KTLL
Sbjct: 146 VEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLL 205
Query: 468 AKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG 527
A+AVA F +S S+ V+ ++G GA VR L+ A+++APS++F+DE+D++G R
Sbjct: 206 ARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR- 264
Query: 528 LIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIP 586
L GSGG E T+ +LL LDGFE N+ I +TNR DILD AL+RPGR DRKI P
Sbjct: 265 LEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFP 324
Query: 587 KPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEI 646
P R++ILK+H+RK + ++ +A + G GAE+ + A + +R+ R +
Sbjct: 325 PPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHV 384
Query: 647 TTDDLLQA-AQIEERGMLDRKERSSETWR 674
T +D A A++ ++ ++ + W+
Sbjct: 385 TQEDFEMAVAKVMQKDS-EKNMSIKKLWK 412
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 412 (150.1 bits), Expect = 5.1e-38, P = 5.1e-38
Identities = 93/269 (34%), Positives = 150/269 (55%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLL 467
+E+ D + + GL K E++E+++ H E++ G+ KTLL
Sbjct: 140 VEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLL 199
Query: 468 AKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG 527
A+AVA F +S S+ V+ ++G GA VR L+ A+++APS++F+DE+D++G R
Sbjct: 200 ARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR- 258
Query: 528 LIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIP 586
L GSGG E T+ +LL LDGFE N+ I +TNR DILD AL+RPGR DRKI P
Sbjct: 259 LEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFP 318
Query: 587 KPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEI 646
P R++ILK+H+RK + ++ +A + G GAE+ + A + +R+ R +
Sbjct: 319 PPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHV 378
Query: 647 TTDDLLQA-AQIEERGMLDRKERSSETWR 674
T +D A A++ ++ ++ + W+
Sbjct: 379 TQEDFEMAVAKVMQKDS-EKNMSIKKLWK 406
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 412 (150.1 bits), Expect = 5.1e-38, P = 5.1e-38
Identities = 93/269 (34%), Positives = 150/269 (55%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLL 467
+E+ D + + GL K E++E+++ H E++ G+ KTLL
Sbjct: 140 VEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLL 199
Query: 468 AKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG 527
A+AVA F +S S+ V+ ++G GA VR L+ A+++APS++F+DE+D++G R
Sbjct: 200 ARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR- 258
Query: 528 LIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIP 586
L GSGG E T+ +LL LDGFE N+ I +TNR DILD AL+RPGR DRKI P
Sbjct: 259 LEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFP 318
Query: 587 KPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEI 646
P R++ILK+H+RK + ++ +A + G GAE+ + A + +R+ R +
Sbjct: 319 PPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHV 378
Query: 647 TTDDLLQA-AQIEERGMLDRKERSSETWR 674
T +D A A++ ++ ++ + W+
Sbjct: 379 TQEDFEMAVAKVMQKDS-EKNMSIKKLWK 406
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 412 (150.1 bits), Expect = 5.1e-38, P = 5.1e-38
Identities = 93/269 (34%), Positives = 150/269 (55%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLL 467
+E+ D + + GL K E++E+++ H E++ G+ KTLL
Sbjct: 140 VEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLL 199
Query: 468 AKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG 527
A+AVA F +S S+ V+ ++G GA VR L+ A+++APS++F+DE+D++G R
Sbjct: 200 ARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR- 258
Query: 528 LIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIP 586
L GSGG E T+ +LL LDGFE N+ I +TNR DILD AL+RPGR DRKI P
Sbjct: 259 LEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFP 318
Query: 587 KPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEI 646
P R++ILK+H+RK + ++ +A + G GAE+ + A + +R+ R +
Sbjct: 319 PPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHV 378
Query: 647 TTDDLLQA-AQIEERGMLDRKERSSETWR 674
T +D A A++ ++ ++ + W+
Sbjct: 379 TQEDFEMAVAKVMQKDS-EKNMSIKKLWK 406
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 412 (150.1 bits), Expect = 5.1e-38, P = 5.1e-38
Identities = 93/269 (34%), Positives = 150/269 (55%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLL 467
+E+ D + + GL K E++E+++ H E++ G+ KTLL
Sbjct: 140 VEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLL 199
Query: 468 AKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG 527
A+AVA F +S S+ V+ ++G GA VR L+ A+++APS++F+DE+D++G R
Sbjct: 200 ARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR- 258
Query: 528 LIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIP 586
L GSGG E T+ +LL LDGFE N+ I +TNR DILD AL+RPGR DRKI P
Sbjct: 259 LEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFP 318
Query: 587 KPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEI 646
P R++ILK+H+RK + ++ +A + G GAE+ + A + +R+ R +
Sbjct: 319 PPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHV 378
Query: 647 TTDDLLQA-AQIEERGMLDRKERSSETWR 674
T +D A A++ ++ ++ + W+
Sbjct: 379 TQEDFEMAVAKVMQKDS-EKNMSIKKLWK 406
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 412 (150.1 bits), Expect = 5.1e-38, P = 5.1e-38
Identities = 93/269 (34%), Positives = 150/269 (55%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLL 467
+E+ D + + GL K E++E+++ H E++ G+ KTLL
Sbjct: 148 VEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLL 207
Query: 468 AKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG 527
A+AVA F +S S+ V+ ++G GA VR L+ A+++APS++F+DE+D++G R
Sbjct: 208 ARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR- 266
Query: 528 LIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIP 586
L GSGG E T+ +LL LDGFE N+ I +TNR DILD AL+RPGR DRKI P
Sbjct: 267 LEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFP 326
Query: 587 KPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEI 646
P R++ILK+H+RK + ++ +A + G GAE+ + A + +R+ R +
Sbjct: 327 PPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHV 386
Query: 647 TTDDLLQA-AQIEERGMLDRKERSSETWR 674
T +D A A++ ++ ++ + W+
Sbjct: 387 TQEDFEMAVAKVMQKDS-EKNMSIKKLWK 414
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 412 (150.1 bits), Expect = 5.1e-38, P = 5.1e-38
Identities = 93/269 (34%), Positives = 150/269 (55%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLL 467
+E+ D + + GL K E++E+++ H E++ G+ KTLL
Sbjct: 148 VEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLL 207
Query: 468 AKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG 527
A+AVA F +S S+ V+ ++G GA VR L+ A+++APS++F+DE+D++G R
Sbjct: 208 ARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR- 266
Query: 528 LIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIP 586
L GSGG E T+ +LL LDGFE N+ I +TNR DILD AL+RPGR DRKI P
Sbjct: 267 LEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFP 326
Query: 587 KPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEI 646
P R++ILK+H+RK + ++ +A + G GAE+ + A + +R+ R +
Sbjct: 327 PPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHV 386
Query: 647 TTDDLLQA-AQIEERGMLDRKERSSETWR 674
T +D A A++ ++ ++ + W+
Sbjct: 387 TQEDFEMAVAKVMQKDS-EKNMSIKKLWK 414
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 412 (150.1 bits), Expect = 5.1e-38, P = 5.1e-38
Identities = 93/269 (34%), Positives = 150/269 (55%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLL 467
+E+ D + + GL K E++E+++ H E++ G+ KTLL
Sbjct: 140 VEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLL 199
Query: 468 AKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG 527
A+AVA F +S S+ V+ ++G GA VR L+ A+++APS++F+DE+D++G R
Sbjct: 200 ARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR- 258
Query: 528 LIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIP 586
L GSGG E T+ +LL LDGFE N+ I +TNR DILD AL+RPGR DRKI P
Sbjct: 259 LEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFP 318
Query: 587 KPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEI 646
P R++ILK+H+RK + ++ +A + G GAE+ + A + +R+ R +
Sbjct: 319 PPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHV 378
Query: 647 TTDDLLQA-AQIEERGMLDRKERSSETWR 674
T +D A A++ ++ ++ + W+
Sbjct: 379 TQEDFEMAVAKVMQKDS-EKNMSIKKLWK 406
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 412 (150.1 bits), Expect = 5.1e-38, P = 5.1e-38
Identities = 93/269 (34%), Positives = 150/269 (55%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLL 467
+E+ D + + GL K E++E+++ H E++ G+ KTLL
Sbjct: 140 VEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLL 199
Query: 468 AKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG 527
A+AVA F +S S+ V+ ++G GA VR L+ A+++APS++F+DE+D++G R
Sbjct: 200 ARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR- 258
Query: 528 LIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIP 586
L GSGG E T+ +LL LDGFE N+ I +TNR DILD AL+RPGR DRKI P
Sbjct: 259 LEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFP 318
Query: 587 KPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEI 646
P R++ILK+H+RK + ++ +A + G GAE+ + A + +R+ R +
Sbjct: 319 PPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHV 378
Query: 647 TTDDLLQA-AQIEERGMLDRKERSSETWR 674
T +D A A++ ++ ++ + W+
Sbjct: 379 TQEDFEMAVAKVMQKDS-EKNMSIKKLWK 406
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 412 (150.1 bits), Expect = 5.1e-38, P = 5.1e-38
Identities = 90/254 (35%), Positives = 144/254 (56%)
Query: 415 VKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAG 473
V +S++ GL + EL E+++ T+ E+++R G+ KTLLA+AVA
Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189
Query: 474 EAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSG 533
+ NF + +S V+ Y+G A +R ++ A+D+ P ++F+DE+DA+G R S
Sbjct: 190 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 249
Query: 534 GQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 593
+E TL +LL +DGF+ V I +TNRPD LDPAL+RPGR DRKI I P R
Sbjct: 250 DREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIELPNEQAR 309
Query: 594 MEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQ 653
++ILK+H+ D+DY A+ ++DG GA+L N+ A + +R +T +D ++
Sbjct: 310 LDILKIHSGPITKHGDIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHEYVTQEDFMK 369
Query: 654 AAQ-IEERGMLDRK 666
A + + + L+ K
Sbjct: 370 AVRKVADSKKLESK 383
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 412 (150.1 bits), Expect = 5.1e-38, P = 5.1e-38
Identities = 93/269 (34%), Positives = 150/269 (55%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLL 467
+E+ D + + GL K E++E+++ H E++ G+ KTLL
Sbjct: 140 VEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLL 199
Query: 468 AKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG 527
A+AVA F +S S+ V+ ++G GA VR L+ A+++APS++F+DE+D++G R
Sbjct: 200 ARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR- 258
Query: 528 LIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIP 586
L GSGG E T+ +LL LDGFE N+ I +TNR DILD AL+RPGR DRKI P
Sbjct: 259 LEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFP 318
Query: 587 KPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEI 646
P R++ILK+H+RK + ++ +A + G GAE+ + A + +R+ R +
Sbjct: 319 PPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHV 378
Query: 647 TTDDLLQA-AQIEERGMLDRKERSSETWR 674
T +D A A++ ++ ++ + W+
Sbjct: 379 TQEDFEMAVAKVMQKDS-EKNMSIKKLWK 406
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 411 (149.7 bits), Expect = 6.6e-38, P = 6.6e-38
Identities = 90/255 (35%), Positives = 144/255 (56%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
DV +S++ GL + EL E+++ T+ E+++R G+ KTLLA+AVA
Sbjct: 143 DVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 202
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
+ NF + +S V+ Y+G A +R ++ A+D+ P ++F+DE+DA+G R S
Sbjct: 203 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 262
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
+E TL +LL +DGF+ V I +TNRPD LDPAL+RPGR DRKI I P
Sbjct: 263 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 322
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLL 652
R++ILK+HA ++DY A+ ++DG GA+L N+ A + +R + +D +
Sbjct: 323 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFM 382
Query: 653 QAAQ-IEERGMLDRK 666
+A + + + L+ K
Sbjct: 383 KAVRKVADSKKLESK 397
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 411 (149.7 bits), Expect = 6.6e-38, P = 6.6e-38
Identities = 90/255 (35%), Positives = 144/255 (56%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
DV +S++ GL + EL E+++ T+ E+++R G+ KTLLA+AVA
Sbjct: 129 DVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
+ NF + +S V+ Y+G A +R ++ A+D+ P ++F+DE+DA+G R S
Sbjct: 189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 248
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
+E TL +LL +DGF+ V I +TNRPD LDPAL+RPGR DRKI I P
Sbjct: 249 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLL 652
R++ILK+HA ++DY A+ ++DG GA+L N+ A + +R + +D +
Sbjct: 309 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFM 368
Query: 653 QAAQ-IEERGMLDRK 666
+A + + + L+ K
Sbjct: 369 KAVRKVADSKKLESK 383
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 411 (149.7 bits), Expect = 6.6e-38, P = 6.6e-38
Identities = 89/245 (36%), Positives = 142/245 (57%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLL 467
+E+ D + V GL K E++E+++ H E++ G+ KTLL
Sbjct: 139 VEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLL 198
Query: 468 AKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG 527
A+AVA F +S ++ V+ Y+G G+ VR L+ A+++APS++F+DE+D++G R
Sbjct: 199 ARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTR- 257
Query: 528 LIKGSGGQERDA--TLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFI 585
++GSGG + + T+ +LL LDGFE N+ I +TNR DILDPAL+RPGR DRKI
Sbjct: 258 -VEGSGGGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEF 316
Query: 586 PKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTE 645
P P + R EIL++H+RK + ++ VA +G GA++ + A + +R+ R
Sbjct: 317 PPPSVAARAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRERRIH 376
Query: 646 ITTDD 650
+T +D
Sbjct: 377 VTQED 381
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 410 (149.4 bits), Expect = 8.6e-38, P = 8.6e-38
Identities = 93/264 (35%), Positives = 146/264 (55%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLL 467
LE+ ++D+ GL E++E V+ TH E Y G++ KTLL
Sbjct: 175 LEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLL 234
Query: 468 AKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG 527
AKAVA + F + S+ ++ Y+G G VR L++ A+++APS+VFIDE+DAVG +R
Sbjct: 235 AKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRY 294
Query: 528 LIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPK 587
G +E T+ +LL LDGF+ RG+V I +TNR + LDPAL+RPGR DRKI P
Sbjct: 295 DSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPL 354
Query: 588 PGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEIT 647
P + I +H + +A+DV+ + D + GA++ I A + +R+ R ++T
Sbjct: 355 PDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVT 414
Query: 648 TDDLLQAAQIEERGMLDRKERSSE 671
+D ++ +E + +KE + E
Sbjct: 415 NEDFKKS---KESVLYRKKEGTPE 435
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 410 (149.4 bits), Expect = 8.6e-38, P = 8.6e-38
Identities = 93/239 (38%), Positives = 138/239 (57%)
Query: 417 FSDVAGLGKIRLE--LEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGE 474
+SD+ GL K ++E +E IV H E + + G++ KTLLA+A A +
Sbjct: 185 YSDIGGLDK-QIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQ 243
Query: 475 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 534
F ++ Q V++++G GA VR + AK+ AP+++FIDELDA+G +R + SG
Sbjct: 244 TNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFDSELSGD 303
Query: 535 QERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRM 594
+E T+ +LL LDGF V IA+TNRPD LDPAL+R GR DRKI +P P R
Sbjct: 304 REVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHPNEESRA 363
Query: 595 EILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQ 653
IL++H+RK + DV++ +A TD GA+L + A + +R G TEI +D ++
Sbjct: 364 RILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRRGATEIDHEDFVE 422
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 410 (149.4 bits), Expect = 8.6e-38, P = 8.6e-38
Identities = 93/239 (38%), Positives = 138/239 (57%)
Query: 417 FSDVAGLGKIRLE--LEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGE 474
+SD+ GL K ++E +E IV H E + + G++ KTLLA+A A +
Sbjct: 185 YSDIGGLDK-QIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQ 243
Query: 475 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 534
F ++ Q V++++G GA VR + AK+ AP+++FIDELDA+G +R + SG
Sbjct: 244 TNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFDSELSGD 303
Query: 535 QERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRM 594
+E T+ +LL LDGF V IA+TNRPD LDPAL+R GR DRKI +P P R
Sbjct: 304 REVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHPNEESRA 363
Query: 595 EILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQ 653
IL++H+RK + DV++ +A TD GA+L + A + +R G TEI +D ++
Sbjct: 364 RILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRRGATEIDHEDFVE 422
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 429 (156.1 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 90/244 (36%), Positives = 139/244 (56%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
+V++ D+ GL +++ +L E V++ H E + + G+ KT+LAKAVA
Sbjct: 492 NVRWEDIGGLDEVKQDLREQVQYPVDHPEKFLKFGLSPSRGVLFYGPPGTGKTMLAKAVA 551
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
E NF S+ + + ++ G S +R ++ +A+ AP +VF+DELD++ + RG G
Sbjct: 552 NECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCIVFLDELDSIAKARGGSVGD 611
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
G D +NQLL +DG + NV I +TNRP+ LDPAL RPGR D I++P P +G
Sbjct: 612 AGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDPALCRPGRLDSLIYVPLPDELG 671
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRT-EITTDDL 651
R+ ILK RK P++DDVD +A+ T G GA+L I + A +++ T +I
Sbjct: 672 RLSILKAQLRKTPVSDDVDLQYIANKTHGFSGADLGFITQRAVKIAIKESITADINRTKA 731
Query: 652 LQAA 655
L+AA
Sbjct: 732 LEAA 735
Score = 403 (146.9 bits), Expect = 1.4e-34, P = 1.4e-34
Identities = 94/290 (32%), Positives = 161/290 (55%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
+V + D+ G K ++ E+V+ H ++++ G++ KTL+A+AVA
Sbjct: 218 EVGYDDIGGCRKQMAQIREMVELPLRHPQLFKSIGIKPPRGVLLYGPPGTGKTLMARAVA 277
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
E G FF I+ + + G S +R ++EA+ N+P+++FIDE+D++ +R K +
Sbjct: 278 NETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKRE--KTN 335
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
G ER ++QLL +DG + R NV+ +A+TNRP+ +DPAL R GRFDR++ I P G
Sbjct: 336 GEVER-RVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTG 394
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTD-DL 651
R+EIL++H + + DDVD +A+ T G VG+++A + AA+ +R+ I D D
Sbjct: 395 RLEILQIHTKNMKLGDDVDLEQIAAETHGYVGSDVAALCSEAAMQQIREKMDLIDLDEDT 454
Query: 652 LQAAQIEERGMLDRKERSS-ETWRQVAINEAAMAVVA-VNFPDLKNIEFV 699
+ A ++ G+ R + A+ E A+ V V + D+ ++ V
Sbjct: 455 IDAEVLDSLGVTMENFRFALGVSNPSALREVAVVEVPNVRWEDIGGLDEV 504
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 407 (148.3 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 88/249 (35%), Positives = 139/249 (55%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLL 467
+E+ ++D+ GL E++E V+ TH E Y G++ KTLL
Sbjct: 175 VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLL 234
Query: 468 AKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG 527
AKAVA + F + S+ ++ Y+G G VR L++ A+++APS+VFIDE+DA+G +R
Sbjct: 235 AKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRY 294
Query: 528 LIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPK 587
G +E T+ +LL LDGF+ RG+V I +TNR + LDPAL+RPGR DRKI P
Sbjct: 295 DSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPL 354
Query: 588 PGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEIT 647
P + I ++H + +ADDV + D + GA++ I A + +R+ R ++T
Sbjct: 355 PDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVT 414
Query: 648 TDDLLQAAQ 656
+D ++ +
Sbjct: 415 NEDFKKSKE 423
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 407 (148.3 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 88/249 (35%), Positives = 139/249 (55%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLL 467
+E+ ++D+ GL E++E V+ TH E Y G++ KTLL
Sbjct: 174 VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLL 233
Query: 468 AKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG 527
AKAVA + F + S+ ++ Y+G G VR L++ A+++APS+VFIDE+DA+G +R
Sbjct: 234 AKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRY 293
Query: 528 LIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPK 587
G +E T+ +LL LDGF+ RG+V I +TNR + LDPAL+RPGR DRKI P
Sbjct: 294 DSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPL 353
Query: 588 PGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEIT 647
P + I ++H + +ADDV + D + GA++ I A + +R+ R ++T
Sbjct: 354 PDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVT 413
Query: 648 TDDLLQAAQ 656
+D ++ +
Sbjct: 414 NEDFKKSKE 422
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 407 (148.3 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 89/255 (34%), Positives = 144/255 (56%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
+V +S++ GL + EL E+++ T+ E+++R G+ KTLLA+AVA
Sbjct: 129 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
+ NF + +S V+ Y+G A +R ++ A+D+ P ++F+DE+DA+G R S
Sbjct: 189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 248
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
+E TL +LL +DGF+ V I +TNRPD LDPAL+RPGR DRKI I P
Sbjct: 249 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLL 652
R++ILK+HA ++DY A+ ++DG GA+L N+ A + +R + +D +
Sbjct: 309 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLGNVCTEAGMFAIRADHDFVVQEDFM 368
Query: 653 QAAQ-IEERGMLDRK 666
+A + + + L+ K
Sbjct: 369 KAVRKVADSKKLESK 383
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 407 (148.3 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 91/251 (36%), Positives = 142/251 (56%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLL 467
+E+ ++D+ GL E++E V+ TH E Y G++ KTLL
Sbjct: 176 VEKAPQETYADIGGLDSQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLL 235
Query: 468 AKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG 527
AKAVA + F + S+ ++ Y+G G VR L++ A+++APS+VFIDE+DA+G +R
Sbjct: 236 AKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRY 295
Query: 528 LIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPK 587
G +E T+ +LL LDGF+ RG+V I +TNR + LDPAL+RPGR DRKI P
Sbjct: 296 DSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPL 355
Query: 588 PGLIGRMEILKVHARKKPMADDV--DYLAVASMTDGMVGAELANIVEVAAINMMRDGRTE 645
P + I ++H + +ADDV D L +A D + GA++ I A + +R+ R +
Sbjct: 356 PDEKTKRRIFQIHTSRMTVADDVTLDDLILAK--DDLSGADIKAICTEAGLMALRERRMK 413
Query: 646 ITTDDLLQAAQ 656
+T +D ++ +
Sbjct: 414 VTNEDFKKSKE 424
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 428 (155.7 bits), Expect = 2.1e-37, P = 2.1e-37
Identities = 96/287 (33%), Positives = 163/287 (56%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
+V + D+ G K ++ E+V+ H ++++ G++ KTL+A+AVA
Sbjct: 210 EVGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVA 269
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
E G FF I+ + + G S +R ++EA+ NAP+++FIDE+D++ +R K +
Sbjct: 270 NETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKRD--KTN 327
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
G ER ++QLL +DG + R NV+ IA+TNRP+ +DPAL R GRFDR++ I P G
Sbjct: 328 GEVER-RVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATG 386
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTD-DL 651
R+E+L++H + +ADDVD A+A+ T G VGA++A++ AA+ +R+ I D D
Sbjct: 387 RLEVLRIHTKNMKLADDVDLEALAAETHGYVGADIASLCSEAAMQQIREKMDLIDLDEDE 446
Query: 652 LQAAQIEERGM-LDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIE 697
+ A ++ G+ +D + A+ E + V V + D+ ++
Sbjct: 447 IDAEVLDSLGVTMDNFRFALGNSNPSALRETVVESVNVTWDDVGGLD 493
Score = 423 (154.0 bits), Expect = 7.9e-37, P = 7.9e-37
Identities = 93/249 (37%), Positives = 137/249 (55%)
Query: 398 RRAYGKGLPQYLER----GVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXX 452
R A G P L V+V + DV GL +I+ EL+E V++ H + Y + G+
Sbjct: 463 RFALGNSNPSALRETVVESVNVTWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSK 522
Query: 453 XXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPS 512
KTLLAKAVA E NF S+ + + ++ G S +R ++ +A+ AP+
Sbjct: 523 GVLFYGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPT 582
Query: 513 VVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPA 572
VVF+DELD++ + RG G G D +NQLL +DG + NV I +TNRPD +DPA
Sbjct: 583 VVFLDELDSIAKARGGSLGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPA 642
Query: 573 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVE 632
++RPGR D+ I++P P R+ IL RK P+ ++ A+A T G GA+L IV+
Sbjct: 643 ILRPGRLDQLIYVPLPDENARLSILNAQLRKTPLEPGLELTAIAKATQGFSGADLLYIVQ 702
Query: 633 VAAINMMRD 641
AA ++D
Sbjct: 703 RAAKYAIKD 711
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 406 (148.0 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 88/249 (35%), Positives = 138/249 (55%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLL 467
LE+ ++D+ GL E++E V+ TH E Y G++ KTLL
Sbjct: 176 LEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLL 235
Query: 468 AKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG 527
AKAVA + F + S+ ++ Y+G G VR L++ A+++ PS+VFIDE+DA+G +R
Sbjct: 236 AKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKRY 295
Query: 528 LIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPK 587
G +E T+ +LL LDGF+ RG+V I +TNR + LDPAL+RPGR DRKI P
Sbjct: 296 DSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPL 355
Query: 588 PGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEIT 647
P + I ++H + +ADDV + D + GA++ I A + +R+ R ++T
Sbjct: 356 PDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVT 415
Query: 648 TDDLLQAAQ 656
+D ++ +
Sbjct: 416 NEDFKKSKE 424
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 406 (148.0 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 88/249 (35%), Positives = 139/249 (55%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLL 467
+E+ ++D+ GL E++E V+ TH E Y G++ KTLL
Sbjct: 176 VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLL 235
Query: 468 AKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG 527
AKAVA + F + S+ ++ Y+G G VR L++ A+++APS+VFIDE+DA+G +R
Sbjct: 236 AKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRY 295
Query: 528 LIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPK 587
G +E T+ +LL LDGF+ RG+V I +TNR + LDPAL+RPGR DRKI P
Sbjct: 296 DSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPL 355
Query: 588 PGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEIT 647
P + I ++H + +ADDV + D + GA++ I A + +R+ R ++T
Sbjct: 356 PDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVT 415
Query: 648 TDDLLQAAQ 656
+D ++ +
Sbjct: 416 NEDFKKSKE 424
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 406 (148.0 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 89/255 (34%), Positives = 144/255 (56%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
+V +S++ GL + EL E+++ T+ E+++R G+ KTLLA+AVA
Sbjct: 129 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
+ NF + +S V+ Y+G A +R ++ A+D+ P ++F+DE+DA+G R S
Sbjct: 189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 248
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
+E TL +LL +DGF+ V I +TNRPD LDPAL+RPGR DRKI I P
Sbjct: 249 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLL 652
R++ILK+HA ++DY A+ ++DG GA+L N+ A + +R + +D +
Sbjct: 309 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFM 368
Query: 653 QAAQ-IEERGMLDRK 666
+A + + + L+ K
Sbjct: 369 KAVRKVADSKKLESK 383
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 406 (148.0 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 88/249 (35%), Positives = 139/249 (55%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLL 467
+E+ ++D+ GL E++E V+ TH E Y G++ KTLL
Sbjct: 176 VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLL 235
Query: 468 AKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG 527
AKAVA + F + S+ ++ Y+G G VR L++ A+++APS+VFIDE+DA+G +R
Sbjct: 236 AKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRY 295
Query: 528 LIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPK 587
G +E T+ +LL LDGF+ RG+V I +TNR + LDPAL+RPGR DRKI P
Sbjct: 296 DSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPL 355
Query: 588 PGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEIT 647
P + I ++H + +ADDV + D + GA++ I A + +R+ R ++T
Sbjct: 356 PDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVT 415
Query: 648 TDDLLQAAQ 656
+D ++ +
Sbjct: 416 NEDFKKSKE 424
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 406 (148.0 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 89/255 (34%), Positives = 144/255 (56%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
+V +S++ GL + EL E+++ T+ E+++R G+ KTLLA+AVA
Sbjct: 135 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 194
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
+ NF + +S V+ Y+G A +R ++ A+D+ P ++F+DE+DA+G R S
Sbjct: 195 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 254
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
+E TL +LL +DGF+ V I +TNRPD LDPAL+RPGR DRKI I P
Sbjct: 255 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 314
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLL 652
R++ILK+HA ++DY A+ ++DG GA+L N+ A + +R + +D +
Sbjct: 315 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFM 374
Query: 653 QAAQ-IEERGMLDRK 666
+A + + + L+ K
Sbjct: 375 KAVRKVADSKKLESK 389
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 406 (148.0 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 88/249 (35%), Positives = 139/249 (55%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLL 467
+E+ ++D+ GL E++E V+ TH E Y G++ KTLL
Sbjct: 103 VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLL 162
Query: 468 AKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG 527
AKAVA + F + S+ ++ Y+G G VR L++ A+++APS+VFIDE+DA+G +R
Sbjct: 163 AKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRY 222
Query: 528 LIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPK 587
G +E T+ +LL LDGF+ RG+V I +TNR + LDPAL+RPGR DRKI P
Sbjct: 223 DSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPL 282
Query: 588 PGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEIT 647
P + I ++H + +ADDV + D + GA++ I A + +R+ R ++T
Sbjct: 283 PDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVT 342
Query: 648 TDDLLQAAQ 656
+D ++ +
Sbjct: 343 NEDFKKSKE 351
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 406 (148.0 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 88/249 (35%), Positives = 139/249 (55%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLL 467
+E+ ++D+ GL E++E V+ TH E Y G++ KTLL
Sbjct: 176 VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLL 235
Query: 468 AKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG 527
AKAVA + F + S+ ++ Y+G G VR L++ A+++APS+VFIDE+DA+G +R
Sbjct: 236 AKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRY 295
Query: 528 LIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPK 587
G +E T+ +LL LDGF+ RG+V I +TNR + LDPAL+RPGR DRKI P
Sbjct: 296 DSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPL 355
Query: 588 PGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEIT 647
P + I ++H + +ADDV + D + GA++ I A + +R+ R ++T
Sbjct: 356 PDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVT 415
Query: 648 TDDLLQAAQ 656
+D ++ +
Sbjct: 416 NEDFKKSKE 424
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 406 (148.0 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 89/255 (34%), Positives = 144/255 (56%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
+V +S++ GL + EL E+++ T+ E+++R G+ KTLLA+AVA
Sbjct: 129 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
+ NF + +S V+ Y+G A +R ++ A+D+ P ++F+DE+DA+G R S
Sbjct: 189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 248
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
+E TL +LL +DGF+ V I +TNRPD LDPAL+RPGR DRKI I P
Sbjct: 249 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLL 652
R++ILK+HA ++DY A+ ++DG GA+L N+ A + +R + +D +
Sbjct: 309 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFM 368
Query: 653 QAAQ-IEERGMLDRK 666
+A + + + L+ K
Sbjct: 369 KAVRKVADSKKLESK 383
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 406 (148.0 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 89/255 (34%), Positives = 144/255 (56%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
+V +S++ GL + EL E+++ T+ E+++R G+ KTLLA+AVA
Sbjct: 143 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 202
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
+ NF + +S V+ Y+G A +R ++ A+D+ P ++F+DE+DA+G R S
Sbjct: 203 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 262
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
+E TL +LL +DGF+ V I +TNRPD LDPAL+RPGR DRKI I P
Sbjct: 263 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 322
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLL 652
R++ILK+HA ++DY A+ ++DG GA+L N+ A + +R + +D +
Sbjct: 323 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFM 382
Query: 653 QAAQ-IEERGMLDRK 666
+A + + + L+ K
Sbjct: 383 KAVRKVADSKKLESK 397
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 406 (148.0 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 88/249 (35%), Positives = 139/249 (55%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLL 467
+E+ ++D+ GL E++E V+ TH E Y G++ KTLL
Sbjct: 176 VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLL 235
Query: 468 AKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG 527
AKAVA + F + S+ ++ Y+G G VR L++ A+++APS+VFIDE+DA+G +R
Sbjct: 236 AKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRY 295
Query: 528 LIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPK 587
G +E T+ +LL LDGF+ RG+V I +TNR + LDPAL+RPGR DRKI P
Sbjct: 296 DSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPL 355
Query: 588 PGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEIT 647
P + I ++H + +ADDV + D + GA++ I A + +R+ R ++T
Sbjct: 356 PDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVT 415
Query: 648 TDDLLQAAQ 656
+D ++ +
Sbjct: 416 NEDFKKSKE 424
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 406 (148.0 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 89/255 (34%), Positives = 144/255 (56%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
+V +S++ GL + EL E+++ T+ E+++R G+ KTLLA+AVA
Sbjct: 129 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
+ NF + +S V+ Y+G A +R ++ A+D+ P ++F+DE+DA+G R S
Sbjct: 189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 248
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
+E TL +LL +DGF+ V I +TNRPD LDPAL+RPGR DRKI I P
Sbjct: 249 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLL 652
R++ILK+HA ++DY A+ ++DG GA+L N+ A + +R + +D +
Sbjct: 309 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFM 368
Query: 653 QAAQ-IEERGMLDRK 666
+A + + + L+ K
Sbjct: 369 KAVRKVADSKKLESK 383
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 406 (148.0 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 88/249 (35%), Positives = 139/249 (55%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLL 467
+E+ ++D+ GL E++E V+ TH E Y G++ KTLL
Sbjct: 176 VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLL 235
Query: 468 AKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG 527
AKAVA + F + S+ ++ Y+G G VR L++ A+++APS+VFIDE+DA+G +R
Sbjct: 236 AKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRY 295
Query: 528 LIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPK 587
G +E T+ +LL LDGF+ RG+V I +TNR + LDPAL+RPGR DRKI P
Sbjct: 296 DSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPL 355
Query: 588 PGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEIT 647
P + I ++H + +ADDV + D + GA++ I A + +R+ R ++T
Sbjct: 356 PDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVT 415
Query: 648 TDDLLQAAQ 656
+D ++ +
Sbjct: 416 NEDFKKSKE 424
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 406 (148.0 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 89/255 (34%), Positives = 144/255 (56%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
+V +S++ GL + EL E+++ T+ E+++R G+ KTLLA+AVA
Sbjct: 129 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
+ NF + +S V+ Y+G A +R ++ A+D+ P ++F+DE+DA+G R S
Sbjct: 189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 248
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
+E TL +LL +DGF+ V I +TNRPD LDPAL+RPGR DRKI I P
Sbjct: 249 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLL 652
R++ILK+HA ++DY A+ ++DG GA+L N+ A + +R + +D +
Sbjct: 309 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFM 368
Query: 653 QAAQ-IEERGMLDRK 666
+A + + + L+ K
Sbjct: 369 KAVRKVADSKKLESK 383
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 406 (148.0 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 89/255 (34%), Positives = 144/255 (56%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
+V +S++ GL + EL E+++ T+ E+++R G+ KTLLA+AVA
Sbjct: 121 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 180
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
+ NF + +S V+ Y+G A +R ++ A+D+ P ++F+DE+DA+G R S
Sbjct: 181 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 240
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
+E TL +LL +DGF+ V I +TNRPD LDPAL+RPGR DRKI I P
Sbjct: 241 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 300
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLL 652
R++ILK+HA ++DY A+ ++DG GA+L N+ A + +R + +D +
Sbjct: 301 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFM 360
Query: 653 QAAQ-IEERGMLDRK 666
+A + + + L+ K
Sbjct: 361 KAVRKVADSKKLESK 375
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 406 (148.0 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 89/255 (34%), Positives = 144/255 (56%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
+V +S++ GL + EL E+++ T+ E+++R G+ KTLLA+AVA
Sbjct: 143 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 202
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
+ NF + +S V+ Y+G A +R ++ A+D+ P ++F+DE+DA+G R S
Sbjct: 203 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 262
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
+E TL +LL +DGF+ V I +TNRPD LDPAL+RPGR DRKI I P
Sbjct: 263 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 322
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLL 652
R++ILK+HA ++DY A+ ++DG GA+L N+ A + +R + +D +
Sbjct: 323 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFM 382
Query: 653 QAAQ-IEERGMLDRK 666
+A + + + L+ K
Sbjct: 383 KAVRKVADSKKLESK 397
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 406 (148.0 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 88/249 (35%), Positives = 139/249 (55%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLL 467
+E+ ++D+ GL E++E V+ TH E Y G++ KTLL
Sbjct: 176 VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLL 235
Query: 468 AKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG 527
AKAVA + F + S+ ++ Y+G G VR L++ A+++APS+VFIDE+DA+G +R
Sbjct: 236 AKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRY 295
Query: 528 LIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPK 587
G +E T+ +LL LDGF+ RG+V I +TNR + LDPAL+RPGR DRKI P
Sbjct: 296 DSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPL 355
Query: 588 PGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEIT 647
P + I ++H + +ADDV + D + GA++ I A + +R+ R ++T
Sbjct: 356 PDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVT 415
Query: 648 TDDLLQAAQ 656
+D ++ +
Sbjct: 416 NEDFKKSKE 424
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 405 (147.6 bits), Expect = 3.1e-37, P = 3.1e-37
Identities = 94/236 (39%), Positives = 135/236 (57%)
Query: 417 FSDVAGLGKIRLEL-EEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEA 475
++D+ GL K EL E IV TH E + + GVR KTL+A+A A +
Sbjct: 170 YNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQT 229
Query: 476 GVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQ 535
F ++ Q V++++G GA VR +Q AK+ AP ++FIDE+DA+G +R + SG +
Sbjct: 230 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDR 289
Query: 536 ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRME 595
E T+ +LL LDGF + IA+TNR DILDPAL+R GR DRKI P P R
Sbjct: 290 EVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARAR 349
Query: 596 ILKVHARKKPMADDVDYLAVASMTDGMVGAELANI-VEVAAINMMRDGRTEITTDD 650
IL++H+RK + DV++ +A TD GA+L + VE + + RD TE+ +D
Sbjct: 350 ILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA-TEVNHED 404
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 405 (147.6 bits), Expect = 3.1e-37, P = 3.1e-37
Identities = 93/264 (35%), Positives = 145/264 (54%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLL 467
LE+ ++DV GL + E++E V+ TH E Y G+R KTLL
Sbjct: 179 LEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLL 238
Query: 468 AKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG 527
AKAVA + F I S+ ++ Y+G G VR L++ A++NAPS+VFIDE+DAVG +R
Sbjct: 239 AKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRY 298
Query: 528 LIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPK 587
G +E T+ +LL LDGF+ RG+V + +TNR + LDPAL+RPGR DRKI P
Sbjct: 299 DSNSGGEREIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPL 358
Query: 588 PGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEIT 647
P + I ++H + + +V+ + D + GA++ + A + +R+ R +T
Sbjct: 359 PDEKTKRRIFQIHTSRMTLGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVT 418
Query: 648 TDDLLQAAQIEERGMLDRKERSSE 671
+D ++ +E + +KE + E
Sbjct: 419 MEDFQKS---KENVLYRKKEGAPE 439
>ASPGD|ASPL0000010049 [details] [associations]
symbol:AN4236 species:162425 "Emericella nidulans"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001302 GO:GO:0030163
GO:GO:0017111 EMBL:AACD01000068 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP OrthoDB:EOG40VZZ2
RefSeq:XP_661840.1 ProteinModelPortal:Q5B5E4 STRING:Q5B5E4
EnsemblFungi:CADANIAT00004422 GeneID:2873654 KEGG:ani:AN4236.2
Uniprot:Q5B5E4
Length = 465
Score = 404 (147.3 bits), Expect = 4.0e-37, P = 4.0e-37
Identities = 91/247 (36%), Positives = 141/247 (57%)
Query: 416 KFSDVAGLGK-IRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGE 474
K++D+ GL K I +E IV E +++ G++ KTLLA+A A E
Sbjct: 209 KYTDIGGLDKQIEEIVEAIVWPMKEAERFKKLGIKAPKGALMYGPPGTGKTLLARACAAE 268
Query: 475 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 534
F ++ Q V++++G GA VR + AK+ APS++FIDELDAVG +R + SG
Sbjct: 269 TNATFLKLAGPQLVQMFIGDGAKLVRDCFALAKEKAPSIIFIDELDAVGTKRFDSEKSGD 328
Query: 535 QERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRM 594
+E T+ +LL LDGF + +A+TNR D+LDPAL+R GR DRKI P P R
Sbjct: 329 REVQRTMLELLNQLDGFASDDRIKVLAATNRVDVLDPALLRSGRLDRKIEFPLPNEEARA 388
Query: 595 EILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 654
IL++H+RK + D V++ +A TD GA+L + A + +R G ++I ++ + A
Sbjct: 389 NILQIHSRKMTVEDSVNWAELARSTDEFGGAQLKAVCVEAGMIALRKGHSKIGHENYVDA 448
Query: 655 -AQIEER 660
A+++ +
Sbjct: 449 IAEVQAK 455
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 404 (147.3 bits), Expect = 4.0e-37, P = 4.0e-37
Identities = 90/249 (36%), Positives = 141/249 (56%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLL 467
+E+ D + V GL K E++E+++ H E++ G+ KTLL
Sbjct: 150 VEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLL 209
Query: 468 AKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG 527
A+AVA F +S S+ V+ ++G GA VR L+ A+++APS++F+DE+D++G R
Sbjct: 210 ARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR- 268
Query: 528 LIKGSGGQERDA--TLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFI 585
++GS G + + T+ +LL LDGFE N+ I +TNR DILDPAL+RPGR DRKI
Sbjct: 269 -VEGSSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEF 327
Query: 586 PKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTE 645
P P R +ILK+H+RK + ++ +A G GAE+ ++ A + +R+ R
Sbjct: 328 PAPDEKARADILKIHSRKMNLMRGINMAKIAEQIPGASGAEVKSVCTEAGMFALRERRIH 387
Query: 646 ITTDDLLQA 654
+T +D A
Sbjct: 388 VTQEDFEMA 396
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 403 (146.9 bits), Expect = 5.1e-37, P = 5.1e-37
Identities = 94/252 (37%), Positives = 139/252 (55%)
Query: 417 FSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEA 475
++D+ GL E++E V+ TH E+Y G++ KTLLAKAVA
Sbjct: 187 YADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANST 246
Query: 476 GVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQ 535
F + S+ ++ Y+G G VR L++ A D +PS+VFIDE+DAVG +R G +
Sbjct: 247 SATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDANSGGER 306
Query: 536 ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRME 595
E T+ +LL LDGF+ RG+V I +TNR + LDPAL+RPGR DRKI P P + R
Sbjct: 307 EIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRR 366
Query: 596 ILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAA 655
I ++H K +A+DV+ D GA++ I A + +R+ R ++T D +A
Sbjct: 367 IFQIHTSKMTLAEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHVDFKKA- 425
Query: 656 QIEERGMLDRKE 667
+E+ M +KE
Sbjct: 426 --KEKVMFKKKE 435
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 403 (146.9 bits), Expect = 5.1e-37, P = 5.1e-37
Identities = 87/249 (34%), Positives = 139/249 (55%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLL 467
+E+ ++D+ GL E++E V+ TH E Y G++ KTLL
Sbjct: 176 VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLL 235
Query: 468 AKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG 527
AKAVA + F + S+ ++ Y+G G VR L++ A+++APS+VFIDE+DA+G +R
Sbjct: 236 AKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRY 295
Query: 528 LIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPK 587
G +E T+ +LL LDGF+ RG+V I +TNR + LDPAL+RPGR DRKI P
Sbjct: 296 DSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPL 355
Query: 588 PGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEIT 647
P + I ++H + +A+DV + D + GA++ I A + +R+ R ++T
Sbjct: 356 PDEKTKRRIFQIHTSRMTVAEDVSLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVT 415
Query: 648 TDDLLQAAQ 656
+D ++ +
Sbjct: 416 NEDFKKSKE 424
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 424 (154.3 bits), Expect = 5.4e-37, P = 5.4e-37
Identities = 96/269 (35%), Positives = 149/269 (55%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
++ + D+ GL ++ EL+E+V++ H + + + G+ KTLLAKA+A
Sbjct: 473 NITWEDIGGLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIA 532
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
E NF SI + + ++ G + VR ++ +A+ AP V+F DELD++ + RG G
Sbjct: 533 NECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGD 592
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
GG D +NQ+L +DG + NV I +TNRPDI+DPA++RPGR D+ I+IP P
Sbjct: 593 GGGAADRVINQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS 652
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG-RTEITTDDL 651
R+ ILK + RK P++ DVD +A MT+G GA+L I + A +R+ EI +
Sbjct: 653 RIAILKANLRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERE 712
Query: 652 LQ----AAQIEERGMLD--RKERSSETWR 674
Q A ++EE + RK+ E R
Sbjct: 713 RQTNPSAMEVEEDDPVPEIRKDHFEEAMR 741
Score = 410 (149.4 bits), Expect = 2.2e-35, P = 2.2e-35
Identities = 111/325 (34%), Positives = 178/325 (54%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
+V + D+ G+ K +++E+V+ H +++ GV+ KTL+A+AVA
Sbjct: 200 EVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
E G FF I+ + + G S +R ++EA+ NAP+++FIDELDA+ +R K
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKRE--KTH 317
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
G ER ++QLL +DG + R +VI +A+TNRP+ +DPAL R GRFDR++ I P G
Sbjct: 318 GEVER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 376
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLL 652
R+EIL++H + +ADDVD VA+ T G VGA+LA + AA+ +R I +D
Sbjct: 377 RLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET 436
Query: 653 QAAQIEER---GMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGREL 709
A++ M D + S++ A+ E + V + + D+ ++ V R +EL
Sbjct: 437 IDAEVMNSLAVTMDDFRWALSQS-NPSALRETVVEVPNITWEDIGGLDDVK---RELQEL 492
Query: 710 GYVRMKMDHM-KF-KEGMLSRQSLL 732
V+ ++H KF K GM + +L
Sbjct: 493 --VQYPVEHPDKFLKFGMTPSKGVL 515
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 424 (154.3 bits), Expect = 5.6e-37, P = 5.6e-37
Identities = 107/307 (34%), Positives = 161/307 (52%)
Query: 398 RRAYGKGLPQYLERGV----DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXX 452
R A G P L V +V++ D+ GL +++ EL E V+ + E + R GV
Sbjct: 473 RFALGSSNPSALRETVVEVPNVRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSK 532
Query: 453 XXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPS 512
KTLLAKA+A E NF S+ + + ++ G S VR ++ +A+ AP
Sbjct: 533 GVLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFGESESNVRDIFDKARAAAPC 592
Query: 513 VVFIDELDAVGRERGLIKG-SGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDP 571
VVF+DELD++ + RG G SGG +R +NQLL +DG + NV I +TNRPD +DP
Sbjct: 593 VVFLDELDSIAKARGASAGDSGGGDR--VVNQLLTEMDGVNSKKNVFVIGATNRPDQIDP 650
Query: 572 ALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIV 631
AL+RPGR D+ I++P P R IL+ R P+A+DVD AVA T G GA+L +V
Sbjct: 651 ALMRPGRLDQLIYVPLPDEEARFSILQTQLRHTPVAEDVDLRAVAKATHGFSGADLEFVV 710
Query: 632 EVAAINMMRDGRTE-ITTDDLLQAAQIEERGMLDRKERSSETWRQVAINEAAMAVVAVNF 690
+ A ++D E I ++ A ++ ++D S+ R MA +V+
Sbjct: 711 QRAVKLAIKDSIEEDIKRENETGEAPADDV-VMDEDASVSQVQRHHVEEAMKMARRSVSD 769
Query: 691 PDLKNIE 697
+++ E
Sbjct: 770 AEVRRYE 776
Score = 421 (153.3 bits), Expect = 1.2e-36, P = 1.2e-36
Identities = 94/289 (32%), Positives = 164/289 (56%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
+V + D+ G + ++ E+V+ H ++++ G++ KTL+A+AVA
Sbjct: 220 EVGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVA 279
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
E G FF I+ + + G S +R ++EA+ N+P+++FIDE+D++ +R K +
Sbjct: 280 NETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKRE--KTN 337
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
G ER ++QLL +DG + R NV+ +A+TNRP+ +DPAL R GRFDR++ + P G
Sbjct: 338 GEVER-RVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTG 396
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTD-DL 651
R+EIL++H + +ADDVD +A+ T G VG++LA++ AA+ +R+ I D D
Sbjct: 397 RLEILRIHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMDMIDLDEDE 456
Query: 652 LQAAQIEERGM-LDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFV 699
+ A ++ G+ +D + + A+ E + V V + D+ +E V
Sbjct: 457 IDAEVLDSLGVTMDNFRFALGSSNPSALRETVVEVPNVRWEDIGGLEEV 505
>ZFIN|ZDB-GENE-030131-666 [details] [associations]
symbol:psmc3 "proteasome (prosome, macropain) 26S
subunit, ATPase, 3" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-666 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 EMBL:BX957297 IPI:IPI00817732 PRIDE:F1QJQ2
Ensembl:ENSDART00000133705 ArrayExpress:F1QJQ2 Bgee:F1QJQ2
Uniprot:F1QJQ2
Length = 427
Score = 402 (146.6 bits), Expect = 6.7e-37, P = 6.7e-37
Identities = 93/245 (37%), Positives = 138/245 (56%)
Query: 410 ERGVDVKFSDVAGLGKIRLEL-EEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLA 468
ER + ++SD+ GL K EL E IV H E + G++ KTLLA
Sbjct: 167 ERPTE-QYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLA 225
Query: 469 KAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGL 528
+A A + F ++ Q V++++G GA VR + AK+ APS++FIDELDA+G +R
Sbjct: 226 RACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFD 285
Query: 529 IKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKP 588
+ +G +E T+ +LL LDGF+ V IA+TNR DILDPAL+R GR DRKI P P
Sbjct: 286 SEKAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMP 345
Query: 589 GLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITT 648
R I+++H+RK + DV++ +A TD GA+ + A + +R G TE+
Sbjct: 346 NEEARARIMQIHSRKMNVCPDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGATELNH 405
Query: 649 DDLLQ 653
+D ++
Sbjct: 406 EDYME 410
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 401 (146.2 bits), Expect = 8.6e-37, P = 8.6e-37
Identities = 92/269 (34%), Positives = 148/269 (55%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLL 467
+E+ D + + GL K E++E+++ H E + G+ KTLL
Sbjct: 135 VEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLL 194
Query: 468 AKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG 527
A+AVA F +S S+ V+ ++G GA VR L+ A+++APS++F+DE+D++G
Sbjct: 195 ARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSR-- 252
Query: 528 LIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIP 586
L GSGG E T+ +LL LDGFE N+ I +TNR DILD AL+RPGR DRKI P
Sbjct: 253 LEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFP 312
Query: 587 KPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEI 646
P R++ILK+H+RK + ++ +A + G GAE+ + A + +R+ R +
Sbjct: 313 PPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHV 372
Query: 647 TTDDLLQA-AQIEERGMLDRKERSSETWR 674
T +D A A++ ++ ++ + W+
Sbjct: 373 TQEDFEMAVAKVMQKDS-EKNMSIKKLWK 400
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 401 (146.2 bits), Expect = 8.6e-37, P = 8.6e-37
Identities = 93/252 (36%), Positives = 139/252 (55%)
Query: 417 FSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEA 475
++D+ GL E++E V+ TH E+Y G++ KTLLAKAVA
Sbjct: 187 YADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANST 246
Query: 476 GVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQ 535
F + S+ ++ Y+G G VR L++ A D +PS+VFIDE+DAVG +R G +
Sbjct: 247 SATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGER 306
Query: 536 ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRME 595
E T+ +LL LDGF+ RG+V I +TNR + LDPAL+RPGR DRKI P P + R
Sbjct: 307 EIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRR 366
Query: 596 ILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAA 655
I ++H K +++DV+ D GA++ I A + +R+ R ++T D +A
Sbjct: 367 IFQIHTSKMTLSEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHPDFKKA- 425
Query: 656 QIEERGMLDRKE 667
+E+ M +KE
Sbjct: 426 --KEKVMFKKKE 435
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 422 (153.6 bits), Expect = 9.1e-37, P = 9.1e-37
Identities = 94/251 (37%), Positives = 143/251 (56%)
Query: 415 VKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAG 473
V + D+ GL ++ EL+E+V++ H + + + G+ KTLLAKA+A
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 474 EAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSG 533
E NF SI + + ++ G + VR ++ +A+ AP V+F DELD++ + RG G G
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 593
Query: 534 GQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 593
G D +NQ+L +DG + NV I +TNRPDI+DPA++RPGR D+ I+IP P R
Sbjct: 594 GGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 653
Query: 594 MEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG-RTEITTDDLL 652
+ ILK + RK P+A DVD +A MT+G GA+L I + A +R+ +EI +
Sbjct: 654 VAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERER 713
Query: 653 Q----AAQIEE 659
Q A ++EE
Sbjct: 714 QTNPSAMEVEE 724
Score = 413 (150.4 bits), Expect = 9.8e-36, P = 9.8e-36
Identities = 113/325 (34%), Positives = 177/325 (54%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
+V + D+ G K +++E+V+ H +++ GV+ KTL+A+AVA
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
E G FF I+ + + G S +R ++EA+ NAP+++FIDELDA+ +R K
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKRE--KTH 317
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
G ER ++QLL +DG + R +VI +A+TNRP+ +DPAL R GRFDR++ I P G
Sbjct: 318 GEVER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 376
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLL 652
R+EIL++H + +ADDVD VA+ T G VGA+LA + AA+ +R I +D
Sbjct: 377 RLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET 436
Query: 653 QAAQIEER---GMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGREL 709
A++ M D + S++ A+ E + V V + D+ +E V R +EL
Sbjct: 437 IDAEVMNSLAVTMDDFRWALSQS-NPSALRETVVEVPQVTWEDIGGLEDVK---RELQEL 492
Query: 710 GYVRMKMDHM-KF-KEGMLSRQSLL 732
V+ ++H KF K GM + +L
Sbjct: 493 --VQYPVEHPDKFLKFGMTPSKGVL 515
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 422 (153.6 bits), Expect = 9.1e-37, P = 9.1e-37
Identities = 94/251 (37%), Positives = 143/251 (56%)
Query: 415 VKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAG 473
V + D+ GL ++ EL+E+V++ H + + + G+ KTLLAKA+A
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 474 EAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSG 533
E NF SI + + ++ G + VR ++ +A+ AP V+F DELD++ + RG G G
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 593
Query: 534 GQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 593
G D +NQ+L +DG + NV I +TNRPDI+DPA++RPGR D+ I+IP P R
Sbjct: 594 GGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 653
Query: 594 MEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG-RTEITTDDLL 652
+ ILK + RK P+A DVD +A MT+G GA+L I + A +R+ +EI +
Sbjct: 654 VAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERER 713
Query: 653 Q----AAQIEE 659
Q A ++EE
Sbjct: 714 QTNPSAMEVEE 724
Score = 413 (150.4 bits), Expect = 9.8e-36, P = 9.8e-36
Identities = 113/325 (34%), Positives = 177/325 (54%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
+V + D+ G K +++E+V+ H +++ GV+ KTL+A+AVA
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
E G FF I+ + + G S +R ++EA+ NAP+++FIDELDA+ +R K
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKRE--KTH 317
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
G ER ++QLL +DG + R +VI +A+TNRP+ +DPAL R GRFDR++ I P G
Sbjct: 318 GEVER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 376
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLL 652
R+EIL++H + +ADDVD VA+ T G VGA+LA + AA+ +R I +D
Sbjct: 377 RLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET 436
Query: 653 QAAQIEER---GMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGREL 709
A++ M D + S++ A+ E + V V + D+ +E V R +EL
Sbjct: 437 IDAEVMNSLAVTMDDFRWALSQS-NPSALRETVVEVPQVTWEDIGGLEDVK---RELQEL 492
Query: 710 GYVRMKMDHM-KF-KEGMLSRQSLL 732
V+ ++H KF K GM + +L
Sbjct: 493 --VQYPVEHPDKFLKFGMTPSKGVL 515
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 422 (153.6 bits), Expect = 9.1e-37, P = 9.1e-37
Identities = 94/251 (37%), Positives = 143/251 (56%)
Query: 415 VKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAG 473
V + D+ GL ++ EL+E+V++ H + + + G+ KTLLAKA+A
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 474 EAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSG 533
E NF SI + + ++ G + VR ++ +A+ AP V+F DELD++ + RG G G
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 593
Query: 534 GQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 593
G D +NQ+L +DG + NV I +TNRPDI+DPA++RPGR D+ I+IP P R
Sbjct: 594 GGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 653
Query: 594 MEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG-RTEITTDDLL 652
+ ILK + RK P+A DVD +A MT+G GA+L I + A +R+ +EI +
Sbjct: 654 VAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERER 713
Query: 653 Q----AAQIEE 659
Q A ++EE
Sbjct: 714 QTNPSAMEVEE 724
Score = 413 (150.4 bits), Expect = 9.8e-36, P = 9.8e-36
Identities = 113/325 (34%), Positives = 177/325 (54%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
+V + D+ G K +++E+V+ H +++ GV+ KTL+A+AVA
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
E G FF I+ + + G S +R ++EA+ NAP+++FIDELDA+ +R K
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKRE--KTH 317
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
G ER ++QLL +DG + R +VI +A+TNRP+ +DPAL R GRFDR++ I P G
Sbjct: 318 GEVER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 376
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLL 652
R+EIL++H + +ADDVD VA+ T G VGA+LA + AA+ +R I +D
Sbjct: 377 RLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET 436
Query: 653 QAAQIEER---GMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGREL 709
A++ M D + S++ A+ E + V V + D+ +E V R +EL
Sbjct: 437 IDAEVMNSLAVTMDDFRWALSQS-NPSALRETVVEVPQVTWEDIGGLEDVK---RELQEL 492
Query: 710 GYVRMKMDHM-KF-KEGMLSRQSLL 732
V+ ++H KF K GM + +L
Sbjct: 493 --VQYPVEHPDKFLKFGMTPSKGVL 515
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 422 (153.6 bits), Expect = 9.1e-37, P = 9.1e-37
Identities = 94/251 (37%), Positives = 143/251 (56%)
Query: 415 VKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAG 473
V + D+ GL ++ EL+E+V++ H + + + G+ KTLLAKA+A
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 474 EAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSG 533
E NF SI + + ++ G + VR ++ +A+ AP V+F DELD++ + RG G G
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 593
Query: 534 GQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 593
G D +NQ+L +DG + NV I +TNRPDI+DPA++RPGR D+ I+IP P R
Sbjct: 594 GGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 653
Query: 594 MEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG-RTEITTDDLL 652
+ ILK + RK P+A DVD +A MT+G GA+L I + A +R+ +EI +
Sbjct: 654 VAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERER 713
Query: 653 Q----AAQIEE 659
Q A ++EE
Sbjct: 714 QTNPSAMEVEE 724
Score = 413 (150.4 bits), Expect = 9.8e-36, P = 9.8e-36
Identities = 113/325 (34%), Positives = 177/325 (54%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
+V + D+ G K +++E+V+ H +++ GV+ KTL+A+AVA
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
E G FF I+ + + G S +R ++EA+ NAP+++FIDELDA+ +R K
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKRE--KTH 317
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
G ER ++QLL +DG + R +VI +A+TNRP+ +DPAL R GRFDR++ I P G
Sbjct: 318 GEVER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 376
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLL 652
R+EIL++H + +ADDVD VA+ T G VGA+LA + AA+ +R I +D
Sbjct: 377 RLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET 436
Query: 653 QAAQIEER---GMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGREL 709
A++ M D + S++ A+ E + V V + D+ +E V R +EL
Sbjct: 437 IDAEVMNSLAVTMDDFRWALSQS-NPSALRETVVEVPQVTWEDIGGLEDVK---RELQEL 492
Query: 710 GYVRMKMDHM-KF-KEGMLSRQSLL 732
V+ ++H KF K GM + +L
Sbjct: 493 --VQYPVEHPDKFLKFGMTPSKGVL 515
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 422 (153.6 bits), Expect = 9.1e-37, P = 9.1e-37
Identities = 94/251 (37%), Positives = 143/251 (56%)
Query: 415 VKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAG 473
V + D+ GL ++ EL+E+V++ H + + + G+ KTLLAKA+A
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 474 EAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSG 533
E NF SI + + ++ G + VR ++ +A+ AP V+F DELD++ + RG G G
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 593
Query: 534 GQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 593
G D +NQ+L +DG + NV I +TNRPDI+DPA++RPGR D+ I+IP P R
Sbjct: 594 GGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 653
Query: 594 MEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG-RTEITTDDLL 652
+ ILK + RK P+A DVD +A MT+G GA+L I + A +R+ +EI +
Sbjct: 654 VAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERER 713
Query: 653 Q----AAQIEE 659
Q A ++EE
Sbjct: 714 QTNPSAMEVEE 724
Score = 413 (150.4 bits), Expect = 9.8e-36, P = 9.8e-36
Identities = 113/325 (34%), Positives = 177/325 (54%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
+V + D+ G K +++E+V+ H +++ GV+ KTL+A+AVA
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
E G FF I+ + + G S +R ++EA+ NAP+++FIDELDA+ +R K
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKRE--KTH 317
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
G ER ++QLL +DG + R +VI +A+TNRP+ +DPAL R GRFDR++ I P G
Sbjct: 318 GEVER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 376
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLL 652
R+EIL++H + +ADDVD VA+ T G VGA+LA + AA+ +R I +D
Sbjct: 377 RLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET 436
Query: 653 QAAQIEER---GMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGREL 709
A++ M D + S++ A+ E + V V + D+ +E V R +EL
Sbjct: 437 IDAEVMNSLAVTMDDFRWALSQS-NPSALRETVVEVPQVTWEDIGGLEDVK---RELQEL 492
Query: 710 GYVRMKMDHM-KF-KEGMLSRQSLL 732
V+ ++H KF K GM + +L
Sbjct: 493 --VQYPVEHPDKFLKFGMTPSKGVL 515
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 422 (153.6 bits), Expect = 9.7e-37, P = 9.7e-37
Identities = 94/251 (37%), Positives = 143/251 (56%)
Query: 415 VKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAG 473
V + D+ GL ++ EL+E+V++ H + + + G+ KTLLAKA+A
Sbjct: 490 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 549
Query: 474 EAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSG 533
E NF SI + + ++ G + VR ++ +A+ AP V+F DELD++ + RG G G
Sbjct: 550 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 609
Query: 534 GQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 593
G D +NQ+L +DG + NV I +TNRPDI+DPA++RPGR D+ I+IP P R
Sbjct: 610 GGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 669
Query: 594 MEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG-RTEITTDDLL 652
+ ILK + RK P+A DVD +A MT+G GA+L I + A +R+ +EI +
Sbjct: 670 VAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERER 729
Query: 653 Q----AAQIEE 659
Q A ++EE
Sbjct: 730 QTNPSAMEVEE 740
Score = 413 (150.4 bits), Expect = 1.0e-35, P = 1.0e-35
Identities = 113/325 (34%), Positives = 177/325 (54%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
+V + D+ G K +++E+V+ H +++ GV+ KTL+A+AVA
Sbjct: 216 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 275
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
E G FF I+ + + G S +R ++EA+ NAP+++FIDELDA+ +R K
Sbjct: 276 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKRE--KTH 333
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
G ER ++QLL +DG + R +VI +A+TNRP+ +DPAL R GRFDR++ I P G
Sbjct: 334 GEVER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 392
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLL 652
R+EIL++H + +ADDVD VA+ T G VGA+LA + AA+ +R I +D
Sbjct: 393 RLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET 452
Query: 653 QAAQIEER---GMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGREL 709
A++ M D + S++ A+ E + V V + D+ +E V R +EL
Sbjct: 453 IDAEVMNSLAVTMDDFRWALSQS-NPSALRETVVEVPQVTWEDIGGLEDVK---RELQEL 508
Query: 710 GYVRMKMDHM-KF-KEGMLSRQSLL 732
V+ ++H KF K GM + +L
Sbjct: 509 --VQYPVEHPDKFLKFGMTPSKGVL 531
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 400 (145.9 bits), Expect = 1.1e-36, P = 1.1e-36
Identities = 88/253 (34%), Positives = 144/253 (56%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLL 467
+E+ D + V GL K E++E+++ H E++ G+ KTLL
Sbjct: 135 VEKVPDSTYDMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLL 194
Query: 468 AKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG 527
A+AVA F +S S+ V+ Y+G G+ VR L+ A+++APS++F+DE+D++G R
Sbjct: 195 ARAVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSR- 253
Query: 528 LIKGSGGQERDA--TLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFI 585
++GS G + + T+ +LL LDGFE ++ I +TNR DILDPAL+RPGR DRKI
Sbjct: 254 -VEGSSGGDSEVQRTMLELLNQLDGFESSKDIKIIMATNRLDILDPALLRPGRIDRKIEF 312
Query: 586 PKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTE 645
P P + R +ILK+H+R + ++ +A +G GA++ + A + +R+ R
Sbjct: 313 PAPTVAARTDILKIHSRSMNLTRGINLRKIAEKMNGCSGADVKGVCTEAGMYALRERRIH 372
Query: 646 ITTDDL-LQAAQI 657
+T +D L A++
Sbjct: 373 VTQEDFELAVAKV 385
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 400 (145.9 bits), Expect = 1.1e-36, P = 1.1e-36
Identities = 92/269 (34%), Positives = 148/269 (55%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLL 467
+E+ D + V GL K E++E+++ H E++ G+ KTLL
Sbjct: 134 VEKVPDSTYEMVGGLDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLL 193
Query: 468 AKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG 527
A+AVA F +S S+ V+ ++G G+ VR L+ A+++APS++F+DE+D++G R
Sbjct: 194 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSAR- 252
Query: 528 LIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPK 587
L G+G E T+ +LL LDGFE N+ I +TNR D+LD AL+RPGR DRKI P
Sbjct: 253 LETGTGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDVLDQALLRPGRIDRKIEFPP 312
Query: 588 PGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEIT 647
P R++ILK+H+RK + ++ +A G GAE+ + A + +R+ R +T
Sbjct: 313 PNEEARLDILKIHSRKMNLTRGINLRKIAEEMPGASGAEVKGVCTEAGMYALRERRVHVT 372
Query: 648 TDDLLQAAQIEERGMLDRKERSS--ETWR 674
+D A + + M D ++ S + W+
Sbjct: 373 QEDFEMA--VSKVMMKDSEKNMSIRKFWK 399
>UNIPROTKB|J9NWA6 [details] [associations]
symbol:LOC100687152 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AAEX03026457 Ensembl:ENSCAFT00000026372 OMA:REAVEQP
Uniprot:J9NWA6
Length = 434
Score = 400 (145.9 bits), Expect = 1.1e-36, P = 1.1e-36
Identities = 93/245 (37%), Positives = 138/245 (56%)
Query: 410 ERGVDVKFSDVAGLGKIRLEL-EEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLA 468
ER + ++SD+ GL K EL E IV H E + G++ KTLLA
Sbjct: 174 ERPTE-QYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLA 232
Query: 469 KAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGL 528
+A A + F ++ Q V++++G GA VR + AK+ APS++FIDELDA G +R
Sbjct: 233 RACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDATGTKRFD 292
Query: 529 IKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKP 588
+ +G +E T+ +LL LDGF+ V IA+TNR DILDPAL+R GR D+KI P P
Sbjct: 293 SEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDQKIEFPMP 352
Query: 589 GLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITT 648
R I+++H+RK ++ DV+Y +A D GA+ + A + +R G TE+T
Sbjct: 353 NEEARARIMQIHSRKMNVSPDVNYEELARCMDDFNGAQCKAVCVEAGMIALRRGTTELTH 412
Query: 649 DDLLQ 653
+D ++
Sbjct: 413 EDYME 417
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 418 (152.2 bits), Expect = 1.1e-36, Sum P(2) = 1.1e-36
Identities = 88/226 (38%), Positives = 128/226 (56%)
Query: 417 FSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEA 475
+ D+ GL ++ EL E V++ H E +R+ G++ KTLLAKA+A E
Sbjct: 474 WEDIGGLEGVKRELRETVQYPVEHPEKFRKFGMQPSKGVLFYGPPGCGKTLLAKAIANEC 533
Query: 476 GVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQ 535
NF SI + + ++ G + VR L+ +A+ AP V+F DELD++ R RG +G G
Sbjct: 534 QANFISIKGPELLTMWFGESEANVRELFDKARQAAPCVLFFDELDSIARSRGSSQGDAGG 593
Query: 536 ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRME 595
D +NQ+L +DG + NV I +TNRPDI+DPA++RPGR D+ I+IP P L R+
Sbjct: 594 AGDRVINQILTEMDGMNAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDLPSRVA 653
Query: 596 ILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRD 641
ILK K P+A DVD + T G GA+L I + A +R+
Sbjct: 654 ILKACLNKSPVAKDVDLEFLGQKTQGFSGADLTEICQRACKLAIRE 699
Score = 406 (148.0 bits), Expect = 5.8e-35, P = 5.8e-35
Identities = 106/324 (32%), Positives = 177/324 (54%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
+V + D+ G+ K ++ E+V+ H ++++ GV+ KT++A+AVA
Sbjct: 198 EVGYDDIGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGILLYGPPGCGKTMIARAVA 257
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
E G FF I+ + + G S +R ++EA+ NAPS++FIDE+D++ +R K
Sbjct: 258 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKRE--KTQ 315
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
G ER ++QLL +DG + R +VI + +TNRP+ +DPAL R GRFDR+I I P G
Sbjct: 316 GEVER-RIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDITIPDATG 374
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLL 652
R+EI+++H + + + VD AVA+ T G VGA+LA + +A+ +R+ I +D
Sbjct: 375 RLEIMRIHTKNMKLDETVDLEAVANETHGYVGADLAALCTESALQCIREKMDVIDLEDET 434
Query: 653 QAAQI-EERGMLDRKERSSETWRQV-AINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELG 710
+A+I E + R++ T A+ E + V + D+ +E V R RE
Sbjct: 435 ISAEILESMSVTQDHFRTALTLSNPSALRETVVEVPTTTWEDIGGLEGVK---RELRET- 490
Query: 711 YVRMKMDHM-KFKE-GMLSRQSLL 732
V+ ++H KF++ GM + +L
Sbjct: 491 -VQYPVEHPEKFRKFGMQPSKGVL 513
Score = 46 (21.3 bits), Expect = 1.1e-36, Sum P(2) = 1.1e-36
Identities = 13/48 (27%), Positives = 20/48 (41%)
Query: 645 EITTDDLLQAAQIEERGMLDRKERSSETWRQVAINEAAMAVVAVNFPD 692
EIT D +A + R + D R E++ Q + + FPD
Sbjct: 729 EITRDHFQEAMRSARRSVSDNDIRKYESFAQTLVQSRGLGN-NFKFPD 775
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 421 (153.3 bits), Expect = 1.2e-36, P = 1.2e-36
Identities = 94/251 (37%), Positives = 143/251 (56%)
Query: 415 VKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAG 473
V + D+ GL ++ EL+E+V++ H + + + G+ KTLLAKA+A
Sbjct: 472 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 531
Query: 474 EAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSG 533
E NF SI + + ++ G + VR ++ +A+ AP V+F DELD++ + RG G G
Sbjct: 532 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 591
Query: 534 GQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 593
G D +NQ+L +DG + NV I +TNRPDI+DPA++RPGR D+ I+IP P R
Sbjct: 592 GGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 651
Query: 594 MEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG-RTEITTDDLL 652
+ ILK + RK P+A DVD +A MT+G GA+L I + A +R+ +EI +
Sbjct: 652 VAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERER 711
Query: 653 Q----AAQIEE 659
Q A ++EE
Sbjct: 712 QTNPSAMEVEE 722
Score = 320 (117.7 bits), Expect = 2.3e-25, P = 2.3e-25
Identities = 100/325 (30%), Positives = 159/325 (48%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
+V + D+ G K +++E+V+ H +++ GV+ KTL+A+AVA
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
E G FF I+ + + G G S R A + D + +
Sbjct: 260 NETGAFFFLINGPEIMSKLAGEGESACRKKISPAPPPLKTAGIFKSDDCFPSPQ-----T 314
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
G+ ++QLL +DG + R +VI +A+TNRP+ +DPAL R GRFDR++ I P G
Sbjct: 315 HGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 374
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLL 652
R+EIL++H + +ADDVD VA+ T G VGA+LA + AA+ +R I +D
Sbjct: 375 RLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET 434
Query: 653 QAAQIEER---GMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGREL 709
A++ M D + S++ A+ E + V V + D+ +E V R +EL
Sbjct: 435 IDAEVMNSLAVTMDDFRWALSQS-NPSALRETVVEVPQVTWEDIGGLEDVK---RELQEL 490
Query: 710 GYVRMKMDHM-KF-KEGMLSRQSLL 732
V+ ++H KF K GM + +L
Sbjct: 491 --VQYPVEHPDKFLKFGMTPSKGVL 513
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 421 (153.3 bits), Expect = 1.2e-36, P = 1.2e-36
Identities = 89/228 (39%), Positives = 133/228 (58%)
Query: 415 VKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAG 473
V + D+ GL ++ EL+E+V++ H + + + G+ KTLLAKA+A
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 474 EAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSG 533
E NF SI + + ++ G + VR ++ +A+ AP V+F DELD++ + RG G G
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 593
Query: 534 GQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 593
G D +NQ+L +DG + NV I +TNRPDI+DPA++RPGR D+ I+IP P R
Sbjct: 594 GGAADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 653
Query: 594 MEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRD 641
M ILK + RK P+A DVD +A MT+G GA+L I + A +R+
Sbjct: 654 MAILKANLRKSPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRE 701
Score = 409 (149.0 bits), Expect = 2.8e-35, P = 2.8e-35
Identities = 112/325 (34%), Positives = 177/325 (54%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
+V + D+ G K +++E+V+ H +++ GV+ KTL+A+AVA
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
E G FF I+ + + G S +R ++EA+ NAP+++FIDELDA+ +R K
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKRE--KTH 317
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
G ER ++QLL +DG + R +VI +A+TNRP+ +DPAL R GRFDR++ I P G
Sbjct: 318 GEVER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTG 376
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLL 652
R+EIL++H + ++DDVD VA+ T G VGA+LA + AA+ +R I +D
Sbjct: 377 RLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET 436
Query: 653 QAAQIEER---GMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGREL 709
A++ M D + S++ A+ E + V V + D+ +E V R +EL
Sbjct: 437 IDAEVMNSLAVTMDDFRWALSQS-NPSALRETVVEVPQVTWEDIGGLEDVK---RELQEL 492
Query: 710 GYVRMKMDHM-KF-KEGMLSRQSLL 732
V+ ++H KF K GM + +L
Sbjct: 493 --VQYPVEHPDKFLKFGMTPSKGVL 515
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 421 (153.3 bits), Expect = 1.2e-36, P = 1.2e-36
Identities = 94/251 (37%), Positives = 143/251 (56%)
Query: 415 VKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAG 473
V + D+ GL ++ EL+E+V++ H + + + G+ KTLLAKA+A
Sbjct: 478 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 537
Query: 474 EAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSG 533
E NF SI + + ++ G + VR ++ +A+ AP V+F DELD++ + RG G G
Sbjct: 538 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 597
Query: 534 GQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 593
G D +NQ+L +DG + NV I +TNRPDI+DPA++RPGR D+ I+IP P R
Sbjct: 598 GGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 657
Query: 594 MEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG-RTEITTDDLL 652
+ ILK + RK P+A DVD +A MT+G GA+L I + A +R+ +EI +
Sbjct: 658 VAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERER 717
Query: 653 Q----AAQIEE 659
Q A ++EE
Sbjct: 718 QTNPSAMEVEE 728
Score = 398 (145.2 bits), Expect = 5.0e-34, P = 5.0e-34
Identities = 108/326 (33%), Positives = 174/326 (53%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
+V + D+ G K +++E+V+ H +++ GV+ KTL+A+AVA
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKG- 531
E G FF I+ + + G S +R ++E + NAP+++FIDELDA+ +
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEETEKNAPAIIFIDELDAIASDDCFPSPQ 319
Query: 532 SGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLI 591
+ G+ ++QLL +DG + R +VI +A+TNRP+ +DPAL R GRFDR++ I P
Sbjct: 320 THGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDAT 379
Query: 592 GRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDL 651
GR+EIL++H + +ADDVD VA+ T G VGA+LA + AA+ +R I +D
Sbjct: 380 GRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDE 439
Query: 652 LQAAQIEER---GMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRE 708
A++ M D + S++ A+ E + V V + D+ +E V R +E
Sbjct: 440 TIDAEVMNSLAVTMDDFRWALSQS-NPSALRETVVEVPQVTWEDIGGLEDVK---RELQE 495
Query: 709 LGYVRMKMDHM-KF-KEGMLSRQSLL 732
L V+ ++H KF K GM + +L
Sbjct: 496 L--VQYPVEHPDKFLKFGMTPSKGVL 519
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 420 (152.9 bits), Expect = 1.5e-36, P = 1.5e-36
Identities = 94/251 (37%), Positives = 142/251 (56%)
Query: 415 VKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAG 473
V + D+ GL ++ EL+E+V++ H + + + G+ KTLLAKA+A
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 474 EAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSG 533
E NF SI + + ++ G + VR ++ +A+ AP V+F DELD++ + RG G G
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 593
Query: 534 GQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 593
G D +NQ+L +DG + NV I +TNRPDI+DPA++RPGR D+ I+IP P R
Sbjct: 594 GGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 653
Query: 594 MEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG-RTEITTDDLL 652
+ ILK + RK P+A DVD +A MT+G GA+L I + A +R+ EI +
Sbjct: 654 IAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERER 713
Query: 653 Q----AAQIEE 659
Q A ++EE
Sbjct: 714 QTNPSAMEVEE 724
Score = 409 (149.0 bits), Expect = 2.8e-35, P = 2.8e-35
Identities = 112/325 (34%), Positives = 177/325 (54%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
+V + D+ G K +++E+V+ H +++ GV+ KTL+A+AVA
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
E G FF I+ + + G S +R ++EA+ NAP+++FIDELDA+ +R K
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKRE--KTH 317
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
G ER ++QLL +DG + R +VI +A+TNRP+ +DPAL R GRFDR++ I P G
Sbjct: 318 GEVER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTG 376
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLL 652
R+EIL++H + ++DDVD VA+ T G VGA+LA + AA+ +R I +D
Sbjct: 377 RLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET 436
Query: 653 QAAQIEER---GMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGREL 709
A++ M D + S++ A+ E + V V + D+ +E V R +EL
Sbjct: 437 IDAEVMNSLAVTMDDFRWALSQS-NPSALRETVVEVPQVTWEDIGGLEDVK---RELQEL 492
Query: 710 GYVRMKMDHM-KF-KEGMLSRQSLL 732
V+ ++H KF K GM + +L
Sbjct: 493 --VQYPVEHPDKFLKFGMTPSKGVL 515
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 420 (152.9 bits), Expect = 1.6e-36, P = 1.6e-36
Identities = 110/329 (33%), Positives = 180/329 (54%)
Query: 410 ERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLA 468
ER DV + DV G+ K ++ E+V+ H ++++ GV+ KTL+A
Sbjct: 199 ERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIA 258
Query: 469 KAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGL 528
+AVA E G FF I+ + + G S +R ++EA+ NAPS++FIDE+D++ +R
Sbjct: 259 RAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKRE- 317
Query: 529 IKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKP 588
K +G ER ++QLL +DG + R +VI + +TNRP+ +DPAL R GRFDR+I I P
Sbjct: 318 -KTNGEVER-RIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVP 375
Query: 589 GLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITT 648
IGR+E+L++H + +A+DVD ++ T G VGA+LA + AA+ +R+ I
Sbjct: 376 DEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDL 435
Query: 649 -DDLLQAAQIEERGMLDRKERSS-ETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAG 706
DD + A + + + ++ A+ E + V V++ D+ +E V
Sbjct: 436 EDDSIDAEILNSMAVTNEHFHTALGNSNPSALRETVVEVPNVSWNDIGGLENVK------ 489
Query: 707 RELGY-VRMKMDHM-KFKE-GMLSRQSLL 732
REL V+ ++H KF++ GM + +L
Sbjct: 490 RELQETVQYPVEHPEKFEKFGMSPSKGVL 518
Score = 409 (149.0 bits), Expect = 2.8e-35, P = 2.8e-35
Identities = 92/248 (37%), Positives = 135/248 (54%)
Query: 400 AYGKGLPQYLERGV----DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXX 454
A G P L V +V ++D+ GL ++ EL+E V++ H E + + G+
Sbjct: 458 ALGNSNPSALRETVVEVPNVSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGV 517
Query: 455 XXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVV 514
KTLLAKA+A E NF S+ + + ++ G + VR ++ +A+ +AP V+
Sbjct: 518 LFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVL 577
Query: 515 FIDELDAVGRERGLIKGS-GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPAL 573
F DELD++ +RG G GG D LNQLL +DG + V I +TNRPDI+D AL
Sbjct: 578 FFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSAL 637
Query: 574 VRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEV 633
+RPGR D+ I+IP P R+ I K RK P+A DVD A+A T G GA++ I +
Sbjct: 638 LRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSGADITEICQR 697
Query: 634 AAINMMRD 641
A +R+
Sbjct: 698 ACKYAIRE 705
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 420 (152.9 bits), Expect = 1.6e-36, P = 1.6e-36
Identities = 98/274 (35%), Positives = 147/274 (53%)
Query: 398 RRAYGKGLPQYLERGV----DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXX 452
R A GK P L V + +SD+ GL ++ EL+E+V++ H E Y + G++
Sbjct: 459 RFAQGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSR 518
Query: 453 XXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPS 512
KTLLAKA+A E NF SI + + ++ G + VR ++ +A+ AP
Sbjct: 519 GVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPC 578
Query: 513 VVFIDELDAVGRERGL-IKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDP 571
V+F DELD++ + RG G GG D +NQ+L +DG + NV I +TNRPDI+DP
Sbjct: 579 VLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDP 638
Query: 572 ALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIV 631
A++RPGR D+ I+IP P R +ILK RK P++ D+D +A T G GA+L I
Sbjct: 639 AVLRPGRLDQLIYIPLPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEIC 698
Query: 632 EVAAINMMRDG-RTEITTDDLLQAAQIEERGMLD 664
+ A +R+ EI + Q Q +++
Sbjct: 699 QRACKLAIRESIEKEIRIEKERQDRQARGEELME 732
Score = 402 (146.6 bits), Expect = 1.8e-34, P = 1.8e-34
Identities = 103/324 (31%), Positives = 176/324 (54%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
D+ + D+ G+ K +++E+V+ H ++++ G++ KTL+A+AVA
Sbjct: 206 DIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVA 265
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
E G FF I+ + + G S +R ++E + N P+++FIDE+DA+ +R K +
Sbjct: 266 NETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKRE--KTN 323
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
G ER ++QLL +DG +GR N++ IA+TNRP+ +D AL R GRFDR+I I P +G
Sbjct: 324 GEVER-RIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVG 382
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITT-DDL 651
R+EIL++H + +ADDVD +A+ G VGA+LA++ AA+ +R+ I DD
Sbjct: 383 RLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIREKMELIDLEDDQ 442
Query: 652 LQAAQIEERGMLDRKERSSETWRQV-AINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELG 710
+ A + + R ++ A+ EA + + D+ ++ V R +EL
Sbjct: 443 IDAEVLNSLAVTMENFRFAQGKSSPSALREAVVETPNTTWSDIGGLQNVK---RELQEL- 498
Query: 711 YVRMKMDHMK--FKEGMLSRQSLL 732
V+ ++H + K GM + +L
Sbjct: 499 -VQYPVEHPEKYLKFGMQPSRGVL 521
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 420 (152.9 bits), Expect = 1.6e-36, P = 1.6e-36
Identities = 98/274 (35%), Positives = 147/274 (53%)
Query: 398 RRAYGKGLPQYLERGV----DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXX 452
R A GK P L V + +SD+ GL ++ EL+E+V++ H E Y + G++
Sbjct: 459 RFAQGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSR 518
Query: 453 XXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPS 512
KTLLAKA+A E NF SI + + ++ G + VR ++ +A+ AP
Sbjct: 519 GVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPC 578
Query: 513 VVFIDELDAVGRERGL-IKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDP 571
V+F DELD++ + RG G GG D +NQ+L +DG + NV I +TNRPDI+DP
Sbjct: 579 VLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDP 638
Query: 572 ALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIV 631
A++RPGR D+ I+IP P R +ILK RK P++ D+D +A T G GA+L I
Sbjct: 639 AVLRPGRLDQLIYIPLPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEIC 698
Query: 632 EVAAINMMRDG-RTEITTDDLLQAAQIEERGMLD 664
+ A +R+ EI + Q Q +++
Sbjct: 699 QRACKLAIRESIEKEIRIEKERQDRQARGEELME 732
Score = 402 (146.6 bits), Expect = 1.8e-34, P = 1.8e-34
Identities = 103/324 (31%), Positives = 176/324 (54%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
D+ + D+ G+ K +++E+V+ H ++++ G++ KTL+A+AVA
Sbjct: 206 DIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVA 265
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
E G FF I+ + + G S +R ++E + N P+++FIDE+DA+ +R K +
Sbjct: 266 NETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKRE--KTN 323
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
G ER ++QLL +DG +GR N++ IA+TNRP+ +D AL R GRFDR+I I P +G
Sbjct: 324 GEVER-RIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVG 382
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITT-DDL 651
R+EIL++H + +ADDVD +A+ G VGA+LA++ AA+ +R+ I DD
Sbjct: 383 RLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIREKMELIDLEDDQ 442
Query: 652 LQAAQIEERGMLDRKERSSETWRQV-AINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELG 710
+ A + + R ++ A+ EA + + D+ ++ V R +EL
Sbjct: 443 IDAEVLNSLAVTMENFRFAQGKSSPSALREAVVETPNTTWSDIGGLQNVK---RELQEL- 498
Query: 711 YVRMKMDHMK--FKEGMLSRQSLL 732
V+ ++H + K GM + +L
Sbjct: 499 -VQYPVEHPEKYLKFGMQPSRGVL 521
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 420 (152.9 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 96/281 (34%), Positives = 153/281 (54%)
Query: 398 RRAYGKGLPQYLER----GVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXX 452
R A G P L V+V + D+ GL I+ EL+E V++ H + Y++ G+
Sbjct: 464 RFALGNSNPSALRETVVENVNVTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTK 523
Query: 453 XXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPS 512
KTLLAKAVA E NF S+ + + ++ G S +R ++ +A+ AP+
Sbjct: 524 GVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPT 583
Query: 513 VVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPA 572
VVF+DELD++ + RG G G D +NQLL +DG + NV I +TNRPD +DPA
Sbjct: 584 VVFLDELDSIAKARGGSHGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPA 643
Query: 573 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVE 632
L+RPGR D+ I++P P R+ IL+ R P+ +D +A +T G GA+L+ IV+
Sbjct: 644 LLRPGRLDQLIYVPLPDEPARLSILQAQLRNTPLEPGLDLNEIAKITHGFSGADLSYIVQ 703
Query: 633 VAA-------------INMMRDGRTEITTDDL-LQAAQIEE 659
+A IN +++ + ++ T+D+ ++ ++EE
Sbjct: 704 RSAKFAIKDSIEAQVKINKIKEEKEKVKTEDVDMKVDEVEE 744
Score = 419 (152.6 bits), Expect = 2.2e-36, P = 2.2e-36
Identities = 86/229 (37%), Positives = 140/229 (61%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
+V + D+ G K ++ E+V+ H ++++ G++ KT++A+AVA
Sbjct: 211 EVGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVA 270
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
E G FF I+ + + G S +R ++EA+ N+PS++FIDE+D++ +R K +
Sbjct: 271 NETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKRD--KTN 328
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
G ER ++QLL +DG + R NV+ IA+TNRP+ +DPAL R GRFDR++ I P G
Sbjct: 329 GEVER-RVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEG 387
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRD 641
R+EIL++H + +ADDVD A+AS T G VGA++A++ AA+ +R+
Sbjct: 388 RLEILRIHTKNMKLADDVDLEAIASETHGFVGADIASLCSEAAMQQIRE 436
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 420 (152.9 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 96/281 (34%), Positives = 153/281 (54%)
Query: 398 RRAYGKGLPQYLER----GVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXX 452
R A G P L V+V + D+ GL I+ EL+E V++ H + Y++ G+
Sbjct: 464 RFALGNSNPSALRETVVENVNVTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTK 523
Query: 453 XXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPS 512
KTLLAKAVA E NF S+ + + ++ G S +R ++ +A+ AP+
Sbjct: 524 GVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPT 583
Query: 513 VVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPA 572
VVF+DELD++ + RG G G D +NQLL +DG + NV I +TNRPD +DPA
Sbjct: 584 VVFLDELDSIAKARGGSHGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPA 643
Query: 573 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVE 632
L+RPGR D+ I++P P R+ IL+ R P+ +D +A +T G GA+L+ IV+
Sbjct: 644 LLRPGRLDQLIYVPLPDEPARLSILQAQLRNTPLEPGLDLNEIAKITHGFSGADLSYIVQ 703
Query: 633 VAA-------------INMMRDGRTEITTDDL-LQAAQIEE 659
+A IN +++ + ++ T+D+ ++ ++EE
Sbjct: 704 RSAKFAIKDSIEAQVKINKIKEEKEKVKTEDVDMKVDEVEE 744
Score = 419 (152.6 bits), Expect = 2.2e-36, P = 2.2e-36
Identities = 86/229 (37%), Positives = 140/229 (61%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
+V + D+ G K ++ E+V+ H ++++ G++ KT++A+AVA
Sbjct: 211 EVGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVA 270
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
E G FF I+ + + G S +R ++EA+ N+PS++FIDE+D++ +R K +
Sbjct: 271 NETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKRD--KTN 328
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
G ER ++QLL +DG + R NV+ IA+TNRP+ +DPAL R GRFDR++ I P G
Sbjct: 329 GEVER-RVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEG 387
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRD 641
R+EIL++H + +ADDVD A+AS T G VGA++A++ AA+ +R+
Sbjct: 388 RLEILRIHTKNMKLADDVDLEAIASETHGFVGADIASLCSEAAMQQIRE 436
>ASPGD|ASPL0000049719 [details] [associations]
symbol:AN2213 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0043171 "peptide catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001307
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER
OrthoDB:EOG4FN7S6 EMBL:AACD01000035 RefSeq:XP_659817.1
ProteinModelPortal:Q5BB67 STRING:Q5BB67
EnsemblFungi:CADANIAT00008897 GeneID:2875757 KEGG:ani:AN2213.2
Uniprot:Q5BB67
Length = 460
Score = 398 (145.2 bits), Expect = 1.8e-36, P = 1.8e-36
Identities = 92/260 (35%), Positives = 141/260 (54%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLL 467
L++ ++D+ GL E+ E V+ H E+Y G++ KTLL
Sbjct: 195 LDKAPTESYADIGGLESQIQEVRESVELPLLHPELYEEMGIKPPKGVILYGAPGTGKTLL 254
Query: 468 AKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG 527
AKAVA + F I S+ ++ Y+G G VR ++Q A ++APS+VFIDE+DA+G +R
Sbjct: 255 AKAVANQTSATFLRIVGSELIQKYLGDGPRLVRQIFQVAAEHAPSIVFIDEIDAIGTKRY 314
Query: 528 LIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPK 587
G +E T+ +LL LDGF+ RG+V I +TN+ + LDPAL+RPGR DRKI
Sbjct: 315 DSTSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFEN 374
Query: 588 PGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEIT 647
P + +I +H K + DDVD + D + GA++ I A + +R+ R +
Sbjct: 375 PDQNTKKKIFTLHTSKMSLGDDVDLDEFINQKDDLSGADIRAICTEAGLMALRERRMRVQ 434
Query: 648 TDDLLQAAQIEERGMLDRKE 667
DD +AA+ ER M +++
Sbjct: 435 MDDF-RAAR--ERIMKTKQD 451
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 419 (152.6 bits), Expect = 2.0e-36, P = 2.0e-36
Identities = 100/302 (33%), Positives = 161/302 (53%)
Query: 415 VKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAG 473
V + D+ GL +++ EL+E+V++ + + + + G+ KTLLAKA+A
Sbjct: 476 VNWEDIGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIAN 535
Query: 474 EAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSG 533
E NF SI + + ++ G + VR ++ +A+ AP ++F DELD++ + RG G
Sbjct: 536 ECQANFVSIKGPELLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKARGGGAGDA 595
Query: 534 GQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 593
G D +NQ+L +DG + NV I +TNRPDI+DPA++RPGR D+ I+IP P + R
Sbjct: 596 GGAADRVINQILTEMDGMTNKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDMPSR 655
Query: 594 MEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG-RTEITTDDLL 652
IL+ + RK P+A DVD + ++ +T+G GA+L I + A +R+ EI +
Sbjct: 656 TAILRANLRKSPVAKDVDLMYLSKITEGFSGADLTEICQRACKLAIREAIEAEIRAERQR 715
Query: 653 QAAQIEERGMLDRKERSSETWRQVAINEAA-MAVVAVNFPDLKNIEFVTIAPRAGRELGY 711
QA + E M D + E R+ EA A +V+ D++ E + R G
Sbjct: 716 QARK--ETAMDDDYDPVPEI-RKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGN 772
Query: 712 VR 713
R
Sbjct: 773 FR 774
Score = 401 (146.2 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 100/290 (34%), Positives = 161/290 (55%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
D+ + D+ G K +++E+V+ H +++ GV+ KTL+A+AVA
Sbjct: 202 DIGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLVARAVA 261
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
E G FF I+ + + G S +R ++EA+ NAP+++FIDELDA+ +R K
Sbjct: 262 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKRE--KTH 319
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
G ER ++QLL +DG + R +V+ +A+TNRP+ +D AL R GRFDR+I I P G
Sbjct: 320 GEVER-RIVSQLLTLMDGLKQRAHVVVMAATNRPNSVDAALRRFGRFDREIDIGIPDSTG 378
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITT-DDL 651
R+EIL++H + +++DVD +++ T G VGA+LA + AA+ +R T I DD
Sbjct: 379 RLEILQIHTKNMKLSEDVDLEQISAETHGHVGADLAALCSEAALQAIRKKMTLIDLEDDS 438
Query: 652 LQAAQIEERG--MLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFV 699
+ A + M D K S++ A+ E + V VN+ D+ ++ V
Sbjct: 439 IDADLLNSLAVTMDDFKWALSQS-NPSALRETVVEVPHVNWEDIGGLDEV 487
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 419 (152.6 bits), Expect = 2.0e-36, P = 2.0e-36
Identities = 93/251 (37%), Positives = 143/251 (56%)
Query: 415 VKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAG 473
V + D+ GL ++ EL+++V++ H + + + G+ KTLLAKA+A
Sbjct: 474 VTWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 474 EAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSG 533
E NF SI + + ++ G + VR ++ +A+ AP V+F DELD++ + RG G G
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 593
Query: 534 GQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 593
G D +NQ+L +DG + NV I +TNRPDI+DPA++RPGR D+ I+IP P R
Sbjct: 594 GGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 653
Query: 594 MEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG-RTEITTDDLL 652
+ ILK + RK P+A DVD +A MT+G GA+L I + A +R+ +EI +
Sbjct: 654 VAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERER 713
Query: 653 Q----AAQIEE 659
Q A ++EE
Sbjct: 714 QTNPSAMEVEE 724
Score = 411 (149.7 bits), Expect = 1.6e-35, P = 1.6e-35
Identities = 113/326 (34%), Positives = 176/326 (53%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
+V + D+ G K +++E+V+ H +++ GV+ KTL+A+AVA
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
E G FF I+ + + G S +R ++EA+ NAP+++FIDELDA+ +R K
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKRE--KTH 317
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
G ER ++QLL +DG + R +VI +A+TNRP+ +DPAL R GRFDR++ I P G
Sbjct: 318 GEVER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 376
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLL 652
R+EIL++H + +ADDVD VA+ T G VGA+LA + AA+ +R I +D
Sbjct: 377 RLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET 436
Query: 653 QAAQIEER---GMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGREL 709
A++ M D + S++ A+ E + V V + D+ +E V REL
Sbjct: 437 IDAEVMNSLAVTMDDFRWALSQS-NPSALRETVVEVPQVTWEDIGGLEDVK------REL 489
Query: 710 -GYVRMKMDHM-KF-KEGMLSRQSLL 732
V+ ++H KF K GM + +L
Sbjct: 490 QDLVQYPVEHPDKFLKFGMTPSKGVL 515
>POMBASE|SPAC3A11.12c [details] [associations]
symbol:rpt5 "19S proteasome regulatory subunit Rpt5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC3A11.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 GO:GO:0008540
OMA:GALMYGP EMBL:AB012136 PIR:T11634 RefSeq:XP_001713083.1
ProteinModelPortal:O14126 STRING:O14126 PRIDE:O14126
EnsemblFungi:SPAC3A11.12c.1 GeneID:3361462 KEGG:spo:SPAC3A11.12c
OrthoDB:EOG40VZZ2 NextBio:20811506 Uniprot:O14126
Length = 438
Score = 397 (144.8 bits), Expect = 2.4e-36, P = 2.4e-36
Identities = 95/263 (36%), Positives = 148/263 (56%)
Query: 416 KFSDVAGLGKIRLEL-EEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGE 474
++SD+ GL K EL E IV + +R+ GV+ KTLLA+A A +
Sbjct: 183 RYSDIGGLSKQIEELFEAIVLPMQQADKFRKLGVKPPKGCLMFGPPGTGKTLLARACAAQ 242
Query: 475 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 534
+ F ++A Q V++++G GA VR + AK+ +P+++FIDELDA+G +R + +G
Sbjct: 243 SNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELDAIGTKRFDSEKAGD 302
Query: 535 QERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRM 594
+E T+ +LL LDGF V IA+TNR D LDPAL+R GR DRK+ P P R+
Sbjct: 303 REVQRTMLELLNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLPNEEARV 362
Query: 595 EILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 654
IL++H+RK + DD+++ +A TD GA L ++ A + +R G T+I + +
Sbjct: 363 GILRIHSRKMAIDDDINWEELARSTDEYNGAMLKSVCVEAGMIALRQGDTKINHEHFMD- 421
Query: 655 AQIEERGMLDRKERSSETWRQVA 677
G+L+ + R S+T + A
Sbjct: 422 ------GILEVQMRKSKTLQYFA 438
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 418 (152.2 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 92/249 (36%), Positives = 138/249 (55%)
Query: 398 RRAYGKGLPQYLERGV----DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXX 452
R A GK P L V + +SD+ GL ++ EL+E+V++ H E Y + G++
Sbjct: 458 RFAMGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSR 517
Query: 453 XXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPS 512
KTLLAKA+A E NF SI + + ++ G + VR ++ +A+ AP
Sbjct: 518 GVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPC 577
Query: 513 VVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPA 572
V+F DELD++ + RG G G D +NQ+L +DG + NV I +TNRPDI+DPA
Sbjct: 578 VLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPA 637
Query: 573 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVE 632
++RPGR D+ I+IP P R++I K RK P++ D+D +A T G GA+L I +
Sbjct: 638 VLRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQ 697
Query: 633 VAAINMMRD 641
A +R+
Sbjct: 698 RACKLAIRE 706
Score = 383 (139.9 bits), Expect = 2.4e-32, P = 2.4e-32
Identities = 102/324 (31%), Positives = 172/324 (53%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
+V + D+ G+ K +++E+V+ H ++++ GV+ KTL+A+AVA
Sbjct: 205 EVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVA 264
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
E G FF I+ + + G S +R + E + N+P+++FIDE+DA+ +R K
Sbjct: 265 NETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKRE--KAH 322
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
G E+ ++QLL +DG + R +V+ IA+TNRP+ +D AL R GRFDR+I I P +G
Sbjct: 323 GEVEK-RIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVG 381
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITT-DDL 651
R+EIL++H + + +DVD VA+ G VGA+LA++ AAI +R+ I DD
Sbjct: 382 RLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELIDLEDDT 441
Query: 652 LQAAQIEERGMLDRKER-SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELG 710
+ A + + R + A+ EA + + D+ ++ V R +EL
Sbjct: 442 IDAEVLNSLAVTMENFRFAMGKSSPSALREAVVETPNTTWSDIGGLQNVK---RELQEL- 497
Query: 711 YVRMKMDHMK--FKEGMLSRQSLL 732
V+ ++H + K GM + +L
Sbjct: 498 -VQYPVEHPEKYLKFGMQPSRGVL 520
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 418 (152.2 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 92/249 (36%), Positives = 138/249 (55%)
Query: 398 RRAYGKGLPQYLERGV----DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXX 452
R A GK P L V + +SD+ GL ++ EL+E+V++ H E Y + G++
Sbjct: 458 RFAMGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSR 517
Query: 453 XXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPS 512
KTLLAKA+A E NF SI + + ++ G + VR ++ +A+ AP
Sbjct: 518 GVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPC 577
Query: 513 VVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPA 572
V+F DELD++ + RG G G D +NQ+L +DG + NV I +TNRPDI+DPA
Sbjct: 578 VLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPA 637
Query: 573 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVE 632
++RPGR D+ I+IP P R++I K RK P++ D+D +A T G GA+L I +
Sbjct: 638 VLRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQ 697
Query: 633 VAAINMMRD 641
A +R+
Sbjct: 698 RACKLAIRE 706
Score = 383 (139.9 bits), Expect = 2.4e-32, P = 2.4e-32
Identities = 102/324 (31%), Positives = 172/324 (53%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
+V + D+ G+ K +++E+V+ H ++++ GV+ KTL+A+AVA
Sbjct: 205 EVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVA 264
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
E G FF I+ + + G S +R + E + N+P+++FIDE+DA+ +R K
Sbjct: 265 NETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKRE--KAH 322
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
G E+ ++QLL +DG + R +V+ IA+TNRP+ +D AL R GRFDR+I I P +G
Sbjct: 323 GEVEK-RIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVG 381
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITT-DDL 651
R+EIL++H + + +DVD VA+ G VGA+LA++ AAI +R+ I DD
Sbjct: 382 RLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELIDLEDDT 441
Query: 652 LQAAQIEERGMLDRKER-SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELG 710
+ A + + R + A+ EA + + D+ ++ V R +EL
Sbjct: 442 IDAEVLNSLAVTMENFRFAMGKSSPSALREAVVETPNTTWSDIGGLQNVK---RELQEL- 497
Query: 711 YVRMKMDHMK--FKEGMLSRQSLL 732
V+ ++H + K GM + +L
Sbjct: 498 -VQYPVEHPEKYLKFGMQPSRGVL 520
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 418 (152.2 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 112/329 (34%), Positives = 179/329 (54%)
Query: 410 ERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLA 468
ER +V + DV G+ K ++ E+V+ H ++++ GV+ KTL+A
Sbjct: 200 ERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIA 259
Query: 469 KAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGL 528
+AVA E G FF I+ + + G S +R ++EA+ NAPS++FIDE+D++ +R
Sbjct: 260 RAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKRE- 318
Query: 529 IKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKP 588
K G ER ++QLL +DG + R +VI + +TNRP+ +DPAL R GRFDR+I I P
Sbjct: 319 -KTHGEVER-RIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVP 376
Query: 589 GLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITT 648
IGR+E+L++H + +A+DVD V+ T G VGA+LA + AA+ +R+ I
Sbjct: 377 DEIGRLEVLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMDVIDL 436
Query: 649 DDLLQAAQIEERGML--DRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAG 706
DD A+I + D + + A+ E + V V++ D+ +E V
Sbjct: 437 DDEEIDAEILNSMAVSNDHFQTALGNSNPSALRETVVEVPNVSWEDIGGLENVK------ 490
Query: 707 RELGY-VRMKMDHM-KFKE-GMLSRQSLL 732
REL V+ ++H KF++ GM + +L
Sbjct: 491 RELQETVQYPVEHPEKFEKFGMSPSKGVL 519
Score = 417 (151.9 bits), Expect = 3.5e-36, P = 3.5e-36
Identities = 92/245 (37%), Positives = 132/245 (53%)
Query: 393 SGARVRRAYGKGLPQYLERGV----DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRG 447
S + A G P L V +V + D+ GL ++ EL+E V++ H E + + G
Sbjct: 452 SNDHFQTALGNSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFG 511
Query: 448 VRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAK 507
+ KTLLAKA+A E NF SI + + ++ G + VR ++ +A+
Sbjct: 512 MSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 571
Query: 508 DNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPD 567
+AP V+F DELD++ +RG G G D LNQLL +DG + V I +TNRPD
Sbjct: 572 QSAPCVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPD 631
Query: 568 ILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAEL 627
I+DPAL+RPGR D+ I+IP P R +I K RK P+A DVD A+A T G GA++
Sbjct: 632 IIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGADI 691
Query: 628 ANIVE 632
I +
Sbjct: 692 TEICQ 696
>DICTYBASE|DDB_G0284415 [details] [associations]
symbol:psmC3 "26S proteasome ATPase 3 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284415 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0030163 GO:GO:0000502
HSSP:Q01853 GO:GO:0017111 EMBL:AAFI02000064 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
RefSeq:XP_638617.1 ProteinModelPortal:Q54PN7 STRING:Q54PN7
PRIDE:Q54PN7 EnsemblProtists:DDB0232967 GeneID:8624588
KEGG:ddi:DDB_G0284415 InParanoid:Q54PN7 OMA:GALMYGP
ProtClustDB:CLSZ2433711 Uniprot:Q54PN7
Length = 421
Score = 396 (144.5 bits), Expect = 3.1e-36, P = 3.1e-36
Identities = 92/257 (35%), Positives = 147/257 (57%)
Query: 416 KFSDVAGLGKIRLEL-EEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGE 474
++SD+ GL K EL E +V TH E + G++ KTLLA+A A +
Sbjct: 166 EYSDIGGLDKQIQELVEAVVLPMTHKERFESIGIKPPKGVLMYGPPGTGKTLLARACAAQ 225
Query: 475 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 534
+ ++ Q V++++G GA VR + AK+ P+++FIDELDA+G +R + SG
Sbjct: 226 TNSTYLKLAGPQLVQMFIGDGAKLVRDAFALAKEKGPTIIFIDELDAIGTKRFDSEVSGD 285
Query: 535 QERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRM 594
+E T+ +LL LDGF N+ IA+TNR DILDPAL+R GR DRKI P P R
Sbjct: 286 REVQRTMLELLNQLDGFSSDANIKVIAATNRIDILDPALLRSGRLDRKIEFPLPNEEARA 345
Query: 595 EILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 654
IL++H+RK ++ DV++ +A ++ GA+L + A + +R G TE+ +D ++
Sbjct: 346 HILQIHSRKMNVSADVNFDELARSSEDFNGAQLKAVCVEAGMIALRRGGTELIHNDFVEG 405
Query: 655 AQIEERGMLDRKERSSE 671
+E ++ +K+++ E
Sbjct: 406 C-VE---VMAKKKKTLE 418
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 395 (144.1 bits), Expect = 4.0e-36, P = 4.0e-36
Identities = 87/248 (35%), Positives = 136/248 (54%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLL 467
+E+ D + + GL + E++E+++ H E++ G+ KTLL
Sbjct: 152 VEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLL 211
Query: 468 AKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG 527
A+AVA F +S S+ V+ Y+G G+ VR L+ A+++APS++F+DE+D++G R
Sbjct: 212 ARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARM 271
Query: 528 LI-KGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIP 586
G+G E T+ +LL LDGFE + + +TNR DILD AL+RPGR DRKI P
Sbjct: 272 ESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFP 331
Query: 587 KPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEI 646
P R +ILK+H+RK + +D +A +G GAEL + A + +R+ R +
Sbjct: 332 NPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHV 391
Query: 647 TTDDLLQA 654
T +D A
Sbjct: 392 TQEDFEMA 399
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 395 (144.1 bits), Expect = 4.0e-36, P = 4.0e-36
Identities = 87/248 (35%), Positives = 136/248 (54%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLL 467
+E+ D + + GL + E++E+++ H E++ G+ KTLL
Sbjct: 152 VEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLL 211
Query: 468 AKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG 527
A+AVA F +S S+ V+ Y+G G+ VR L+ A+++APS++F+DE+D++G R
Sbjct: 212 ARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARM 271
Query: 528 LI-KGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIP 586
G+G E T+ +LL LDGFE + + +TNR DILD AL+RPGR DRKI P
Sbjct: 272 ESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFP 331
Query: 587 KPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEI 646
P R +ILK+H+RK + +D +A +G GAEL + A + +R+ R +
Sbjct: 332 NPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHV 391
Query: 647 TTDDLLQA 654
T +D A
Sbjct: 392 TQEDFEMA 399
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 416 (151.5 bits), Expect = 4.5e-36, P = 4.5e-36
Identities = 92/254 (36%), Positives = 134/254 (52%)
Query: 393 SGARVRRAYGKGLPQYLERGV----DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRG 447
S A G P L V +V + D+ GL ++ EL+E V++ H E + + G
Sbjct: 451 SNEHFHTALGNSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFG 510
Query: 448 VRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAK 507
+ KTLLAKA+A E NF S+ + + ++ G + VR ++ +A+
Sbjct: 511 MSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKAR 570
Query: 508 DNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPD 567
+AP V+F DELD++ +RG G G D LNQLL +DG + V I +TNRPD
Sbjct: 571 QSAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPD 630
Query: 568 ILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAEL 627
I+D AL+RPGR D+ I+IP P R+ I K RK P+A DVD A+A T G GA++
Sbjct: 631 IIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADI 690
Query: 628 ANIVEVAAINMMRD 641
I + A +R+
Sbjct: 691 TEICQRACKYAIRE 704
Score = 416 (151.5 bits), Expect = 4.5e-36, P = 4.5e-36
Identities = 109/329 (33%), Positives = 180/329 (54%)
Query: 410 ERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLA 468
ER +V + DV G+ K ++ E+V+ H ++++ GV+ KTL+A
Sbjct: 199 ERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIA 258
Query: 469 KAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGL 528
+AVA E G FF I+ + + G S +R ++EA+ NAPS++FIDE+D++ +R
Sbjct: 259 RAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKRE- 317
Query: 529 IKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKP 588
K +G ER ++QLL +DG + R +VI + +TNRP+ +DPAL R GRFDR+I I P
Sbjct: 318 -KTNGEVER-RIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVP 375
Query: 589 GLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITT 648
IGR+E+L++H + +A+DVD ++ T G VGA+LA + AA+ +R+ I
Sbjct: 376 DEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDL 435
Query: 649 -DDLLQAAQIEERGMLDRKERSS-ETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAG 706
DD + A + + + ++ A+ E + V V++ D+ +E V
Sbjct: 436 EDDSIDAEILNSMAVSNEHFHTALGNSNPSALRETVVEVPNVSWEDIGGLENVK------ 489
Query: 707 RELGY-VRMKMDHM-KFKE-GMLSRQSLL 732
REL V+ ++H KF++ GM + +L
Sbjct: 490 RELQETVQYPVEHPEKFEKFGMSPSKGVL 518
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 394 (143.8 bits), Expect = 5.1e-36, P = 5.1e-36
Identities = 87/249 (34%), Positives = 138/249 (55%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLL 467
+E+ +SD+ GL E++E ++ TH E+Y G++ KTLL
Sbjct: 175 VEKAPTESYSDIGGLEAQVQEMKEAIELPLTHPELYEEIGIKPPKGVILYGEPGTGKTLL 234
Query: 468 AKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG 527
AKAVA + F + S+ ++ Y+G G VR L++ A + APS+VFIDE+DAVG +R
Sbjct: 235 AKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADECAPSIVFIDEIDAVGTKRY 294
Query: 528 LIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPK 587
+ G +E T+ +LL LDGF+ R +V I +TNR + LDPAL+RPGR DRKI P
Sbjct: 295 DSQSGGEREIQRTMLELLNQLDGFDARTDVKVIMATNRIETLDPALIRPGRIDRKIEFPL 354
Query: 588 PGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEIT 647
P + + +I ++H K +++DV+ D + GA++ I + + +R+ R +T
Sbjct: 355 PDIKTKRKIFEIHTAKMNLSEDVNLEEFVMSKDDLSGADIKAICTESGLLALRERRMRVT 414
Query: 648 TDDLLQAAQ 656
D +A +
Sbjct: 415 HTDFKKAKE 423
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 393 (143.4 bits), Expect = 6.6e-36, P = 6.6e-36
Identities = 91/236 (38%), Positives = 134/236 (56%)
Query: 417 FSDVAGLGKIRLEL-EEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEA 475
++D+ GL K EL E IV TH E + + G+R KTL+A+A A +
Sbjct: 169 YNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQT 228
Query: 476 GVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQ 535
F ++ Q V++++G GA VR + AK+ +P ++FIDE+DA+G +R + SG +
Sbjct: 229 NATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDR 288
Query: 536 ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRME 595
E T+ +LL LDGF + IA+TNR DILDPAL+R GR DRKI P P R
Sbjct: 289 EVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGR 348
Query: 596 ILKVHARKKPMADDVDYLAVASMTDGMVGAELANI-VEVAAINMMRDGRTEITTDD 650
IL++H+RK + DV++ +A TD GA+L + VE + + RD TE+ +D
Sbjct: 349 ILQIHSRKMNVNADVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA-TEVNHED 403
>WB|WBGene00004501 [details] [associations]
symbol:rpt-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0016887 GO:GO:0000502 GO:GO:0006511 EMBL:Z78012
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 PIR:T20152
RefSeq:NP_506005.1 ProteinModelPortal:Q18787 SMR:Q18787
IntAct:Q18787 MINT:MINT-212537 STRING:Q18787 PaxDb:Q18787
PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1 EnsemblMetazoa:C52E4.4.2
GeneID:179641 KEGG:cel:CELE_C52E4.4 UCSC:C52E4.4.1 CTD:179641
WormBase:C52E4.4 InParanoid:Q18787 NextBio:906264 Uniprot:Q18787
Length = 435
Score = 393 (143.4 bits), Expect = 6.6e-36, P = 6.6e-36
Identities = 95/249 (38%), Positives = 134/249 (53%)
Query: 409 LERGVDVKFSDVAGLGKIRLE-LEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTL 466
+E DV +SDV G K ++E L E+V+ H E Y G+ KTL
Sbjct: 168 VEEKPDVTYSDVGGC-KDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTL 226
Query: 467 LAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRER 526
A+AVA F + S+ V+ YVG GA VR L++ A+ ++F DE+DAVG R
Sbjct: 227 CARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGAR 286
Query: 527 GLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFI 585
G GG E T+ +L+ LDGF+ RGN+ + +TNRPD LDPAL+RPGR DRK+
Sbjct: 287 -FDDGQGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEF 345
Query: 586 PKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTE 645
P L GR ILK+HA++ + D+ Y +A + GAE+ ++ A + +R R
Sbjct: 346 ALPDLAGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKV 405
Query: 646 ITTDDLLQA 654
T D L+A
Sbjct: 406 ATEKDFLEA 414
>UNIPROTKB|Q18787 [details] [associations]
symbol:rpt-1 "26S protease regulatory subunit 7"
species:6239 "Caenorhabditis elegans" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0016887 GO:GO:0000502
GO:GO:0006511 EMBL:Z78012 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
GeneTree:ENSGT00550000074978 PIR:T20152 RefSeq:NP_506005.1
ProteinModelPortal:Q18787 SMR:Q18787 IntAct:Q18787 MINT:MINT-212537
STRING:Q18787 PaxDb:Q18787 PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1
EnsemblMetazoa:C52E4.4.2 GeneID:179641 KEGG:cel:CELE_C52E4.4
UCSC:C52E4.4.1 CTD:179641 WormBase:C52E4.4 InParanoid:Q18787
NextBio:906264 Uniprot:Q18787
Length = 435
Score = 393 (143.4 bits), Expect = 6.6e-36, P = 6.6e-36
Identities = 95/249 (38%), Positives = 134/249 (53%)
Query: 409 LERGVDVKFSDVAGLGKIRLE-LEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTL 466
+E DV +SDV G K ++E L E+V+ H E Y G+ KTL
Sbjct: 168 VEEKPDVTYSDVGGC-KDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTL 226
Query: 467 LAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRER 526
A+AVA F + S+ V+ YVG GA VR L++ A+ ++F DE+DAVG R
Sbjct: 227 CARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGAR 286
Query: 527 GLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFI 585
G GG E T+ +L+ LDGF+ RGN+ + +TNRPD LDPAL+RPGR DRK+
Sbjct: 287 -FDDGQGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEF 345
Query: 586 PKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTE 645
P L GR ILK+HA++ + D+ Y +A + GAE+ ++ A + +R R
Sbjct: 346 ALPDLAGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKV 405
Query: 646 ITTDDLLQA 654
T D L+A
Sbjct: 406 ATEKDFLEA 414
>WB|WBGene00004505 [details] [associations]
symbol:rpt-5 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:FO080337
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371
SMR:O76371 IntAct:O76371 MINT:MINT-211164 STRING:O76371
PaxDb:O76371 EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2
GeneID:172238 KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238
WormBase:F56H1.4 InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 392 (143.0 bits), Expect = 8.5e-36, P = 8.5e-36
Identities = 91/247 (36%), Positives = 141/247 (57%)
Query: 410 ERGVDVKFSDVAGLGKIRLEL-EEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLA 468
ER + ++SD+ G K EL E +V TH + + G+ KT++A
Sbjct: 170 ERPTE-QYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPPGTGKTMMA 228
Query: 469 KAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGL 528
+AVA + F ++ Q V++++G GA VR + AK+ AP+++FIDELDA+G +R
Sbjct: 229 RAVAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFD 288
Query: 529 IKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKP 588
+ +G +E T+ +LL LDGF+ ++ IA+TNR D+LDPAL+R GR DRKI +P P
Sbjct: 289 SEKAGDREVQRTMLELLNQLDGFQPNDDIKVIAATNRIDVLDPALLRSGRLDRKIELPHP 348
Query: 589 GLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANI-VEVAAINMMRDGRTEIT 647
R I+++H+RK + DV++ +A TD GA+ + VE I + RD TEI
Sbjct: 349 NEDARARIMQIHSRKMNVNKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRDA-TEIL 407
Query: 648 TDDLLQA 654
+D + A
Sbjct: 408 HEDFMDA 414
>UNIPROTKB|O76371 [details] [associations]
symbol:rpt-5 "Protein RPT-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
GeneTree:ENSGT00560000077230 EMBL:FO080337 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371 SMR:O76371
IntAct:O76371 MINT:MINT-211164 STRING:O76371 PaxDb:O76371
EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2 GeneID:172238
KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238 WormBase:F56H1.4
InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 392 (143.0 bits), Expect = 8.5e-36, P = 8.5e-36
Identities = 91/247 (36%), Positives = 141/247 (57%)
Query: 410 ERGVDVKFSDVAGLGKIRLEL-EEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLA 468
ER + ++SD+ G K EL E +V TH + + G+ KT++A
Sbjct: 170 ERPTE-QYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPPGTGKTMMA 228
Query: 469 KAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGL 528
+AVA + F ++ Q V++++G GA VR + AK+ AP+++FIDELDA+G +R
Sbjct: 229 RAVAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFD 288
Query: 529 IKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKP 588
+ +G +E T+ +LL LDGF+ ++ IA+TNR D+LDPAL+R GR DRKI +P P
Sbjct: 289 SEKAGDREVQRTMLELLNQLDGFQPNDDIKVIAATNRIDVLDPALLRSGRLDRKIELPHP 348
Query: 589 GLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANI-VEVAAINMMRDGRTEIT 647
R I+++H+RK + DV++ +A TD GA+ + VE I + RD TEI
Sbjct: 349 NEDARARIMQIHSRKMNVNKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRDA-TEIL 407
Query: 648 TDDLLQA 654
+D + A
Sbjct: 408 HEDFMDA 414
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 413 (150.4 bits), Expect = 9.9e-36, P = 9.9e-36
Identities = 113/325 (34%), Positives = 177/325 (54%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
+V + D+ G K +++E+V+ H +++ GV+ KTL+A+AVA
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
E G FF I+ + + G S +R ++EA+ NAP+++FIDELDA+ +R K
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKRE--KTH 317
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
G ER ++QLL +DG + R +VI +A+TNRP+ +DPAL R GRFDR++ I P G
Sbjct: 318 GEVER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 376
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLL 652
R+EIL++H + +ADDVD VA+ T G VGA+LA + AA+ +R I +D
Sbjct: 377 RLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET 436
Query: 653 QAAQIEER---GMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGREL 709
A++ M D + S++ A+ E + V V + D+ +E V R +EL
Sbjct: 437 IDAEVMNSLAVTMDDFRWALSQS-NPSALRETVVEVPQVTWEDIGGLEDVK---RELQEL 492
Query: 710 GYVRMKMDHM-KF-KEGMLSRQSLL 732
V+ ++H KF K GM + +L
Sbjct: 493 --VQYPVEHPDKFLKFGMTPSKGVL 515
Score = 411 (149.7 bits), Expect = 1.7e-35, P = 1.7e-35
Identities = 94/253 (37%), Positives = 143/253 (56%)
Query: 415 VKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAG 473
V + D+ GL ++ EL+E+V++ H + + + G+ KTLLAKA+A
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 474 EAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSG 533
E NF SI + + ++ G + VR ++ +A+ AP V+F DELD++ + RG G G
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 593
Query: 534 GQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 593
G D +NQ+L +DG + NV I +TNRPDI+DPA++RPGR D+ I+IP P R
Sbjct: 594 GGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 653
Query: 594 MEILKVHARKKPMAD--DVDYLAVASMTDGMVGAELANIVEVAAINMMRDG-RTEITTDD 650
+ ILK + RK P+A DVD +A MT+G GA+L I + A +R+ +EI +
Sbjct: 654 VAILKANLRKSPVAKAGDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRER 713
Query: 651 LLQ----AAQIEE 659
Q A ++EE
Sbjct: 714 ERQTNPSAMEVEE 726
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 413 (150.4 bits), Expect = 1.1e-35, P = 1.1e-35
Identities = 104/320 (32%), Positives = 176/320 (55%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
+V + D+ G K ++ E+V+ H ++++ G++ KTL+A+AVA
Sbjct: 221 EVGYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVA 280
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
E G FF I+ + + G S +R ++EA+ N+P+++FIDE+D++ +R K +
Sbjct: 281 NETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKRE--KTN 338
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
G ER ++QLL +DG + R NV+ +A+TNRP+ +DPAL R GRFDR++ I P G
Sbjct: 339 GEVER-RVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTG 397
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTD-DL 651
R+EIL +H + + +DVD +A+ T G VG++LA++ AA+ +R+ I D D
Sbjct: 398 RLEILSIHTKNMKLGEDVDLETIAAETHGYVGSDLASLCSEAAMQQIREKMDLIDLDEDT 457
Query: 652 LQAAQIEERGM-LDRKERSSETWRQVAINEAAMAVVA-VNFPDLKNIEFVTIAPRAGREL 709
+ A ++ G+ ++ + A+ E A+ V V + D+ +E V REL
Sbjct: 458 IDAEVLDSLGVTMENFRYALGVSNPSALREVAVVEVPNVRWEDIGGLEEVK------REL 511
Query: 710 -GYVRMKMDHM-KFKEGMLS 727
V+ +DH KF++ LS
Sbjct: 512 IESVQYPVDHPEKFQKFGLS 531
Score = 412 (150.1 bits), Expect = 1.4e-35, P = 1.4e-35
Identities = 93/256 (36%), Positives = 140/256 (54%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
+V++ D+ GL +++ EL E V++ H E +++ G+ KT+LAKAVA
Sbjct: 495 NVRWEDIGGLEEVKRELIESVQYPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTMLAKAVA 554
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
E NF S+ + + ++ G S +R ++ +A+ AP VVF+DELD++ + RG G
Sbjct: 555 NECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCVVFLDELDSIAKSRGGSVGD 614
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
G D +NQLL +DG + NV I +TNRP+ LD ALVRPGR D +++P P
Sbjct: 615 AGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDAALVRPGRLDTLVYVPLPDQAS 674
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG-RTEITTDDL 651
R ILK RK P+A DVD +AS T G GA+L + + A +++ EI
Sbjct: 675 REGILKAQLRKTPVASDVDIEFIASKTHGFSGADLGFVTQRAVKLAIKESISAEIERQKQ 734
Query: 652 LQAAQIEERGMLDRKE 667
+AA E+ M D +E
Sbjct: 735 REAAG-EDVKMEDEEE 749
>CGD|CAL0002261 [details] [associations]
symbol:RPT5 species:5476 "Candida albicans" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002261 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000086 EMBL:AACQ01000085 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 RefSeq:XP_715432.1 RefSeq:XP_715502.1
ProteinModelPortal:Q5A0X3 STRING:Q5A0X3 GeneID:3642858
GeneID:3642911 KEGG:cal:CaO19.10635 KEGG:cal:CaO19.3123
Uniprot:Q5A0X3
Length = 454
Score = 390 (142.3 bits), Expect = 1.4e-35, P = 1.4e-35
Identities = 91/247 (36%), Positives = 142/247 (57%)
Query: 417 FSDVAGLGKIRLEL-EEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEA 475
+SD+ GL K EL E +V + ++ G++ KTLLA+A A ++
Sbjct: 199 YSDIGGLDKQIEELIEAVVLPMKQADKFKNLGIKPPKGALMYGPPGTGKTLLARACAAQS 258
Query: 476 GVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQ 535
G F ++A Q V++++G GA VR + AK+ AP+++FIDELDA+G +R SG +
Sbjct: 259 GATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSDKSGDR 318
Query: 536 ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRME 595
E T+ +LL LDGF V +A+TNR D LDPAL+R GR DRKI P P R
Sbjct: 319 EVQRTMLELLNQLDGFGSDDRVKVLAATNRVDTLDPALLRSGRLDRKIEFPLPSEEARES 378
Query: 596 ILKVHARKKPMADD-VDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 654
+LK+HARK ++ V++ +A TD GA+L + A + +R+G++ I +D ++A
Sbjct: 379 VLKIHARKLHCDNNSVNWRELARSTDEFNGAQLKAVTVEAGMIALRNGKSIIKHEDFVEA 438
Query: 655 -AQIEER 660
++++ R
Sbjct: 439 ISEVQAR 445
>UNIPROTKB|F1MWE0 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:DAAA02041602 IPI:IPI00701790
UniGene:Bt.49089 Ensembl:ENSBTAT00000028983 NextBio:20868523
Uniprot:F1MWE0
Length = 456
Score = 390 (142.3 bits), Expect = 1.4e-35, P = 1.4e-35
Identities = 86/224 (38%), Positives = 128/224 (57%)
Query: 430 LEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVE 489
+E IV H E + G++ KTLLA+A A + F ++ Q V+
Sbjct: 216 VEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQ 275
Query: 490 IYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLD 549
+++G GA VR + AK+ APS++FIDELDA+G +R + +G +E T+ +LL LD
Sbjct: 276 MFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLD 335
Query: 550 GFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADD 609
GF+ V IA+TNR DILDPAL+R GR DRKI P P R I+++H+RK ++ D
Sbjct: 336 GFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPD 395
Query: 610 VDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQ 653
V+Y +A TD GA+ + A + +R G TE+T +D ++
Sbjct: 396 VNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYME 439
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 410 (149.4 bits), Expect = 2.1e-35, P = 2.1e-35
Identities = 90/242 (37%), Positives = 137/242 (56%)
Query: 398 RRAYGKGLPQYL-ERGVDVK---FSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXX 452
R A K P L E V+V ++D+ GL ++ EL+E+V++ H + + + G++
Sbjct: 450 RYAMTKSSPSALRETVVEVPNTTWTDIGGLESVKKELQELVQYPVEHPDKFLKFGMQPSR 509
Query: 453 XXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPS 512
KTLLAKA+A E NF S+ + + ++ G + VR ++ +A+ AP
Sbjct: 510 GVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSAAPC 569
Query: 513 VVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPA 572
V+F DELD++ + RG G G D +NQ+L +DG + NV I +TNRPDI+DPA
Sbjct: 570 VLFFDELDSIAKARGGNVGDAGGAADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPA 629
Query: 573 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVE 632
++RPGR D+ I+IP P R ILK + RK P+A +VD +A +T G GA+L I +
Sbjct: 630 ILRPGRLDQLIYIPLPDDKSREAILKANLRKSPLAKEVDLTYIAKVTQGFSGADLTEICQ 689
Query: 633 VA 634
A
Sbjct: 690 RA 691
Score = 392 (143.0 bits), Expect = 2.3e-33, P = 2.3e-33
Identities = 104/323 (32%), Positives = 173/323 (53%)
Query: 415 VKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAG 473
V + D+ G K +++E+V+ H +++ GV+ KTL+A+AVA
Sbjct: 198 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 257
Query: 474 EAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSG 533
E G FF I+ + + G S +R ++EA+ N+P+++FIDE+DA+ +R K G
Sbjct: 258 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKRD--KTHG 315
Query: 534 GQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 593
ER ++QLL +DG + ++I +A+TNRP+ +DPAL R GRFDR+I I P GR
Sbjct: 316 EVER-RIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGR 374
Query: 594 MEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITT-DDLL 652
+E+L++H + + DDVD +A+ + G VGA+LA++ AA+ +R+ I DD +
Sbjct: 375 LEVLRIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEAALQQIREKMDLIDLEDDKI 434
Query: 653 QAAQIEERGMLDRKERSSETWRQV-AINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGY 711
A + + R + T A+ E + V + D+ +E V + +EL
Sbjct: 435 DAEVLASLAVTMENFRYAMTKSSPSALRETVVEVPNTTWTDIGGLESVK---KELQEL-- 489
Query: 712 VRMKMDHM-KF-KEGMLSRQSLL 732
V+ ++H KF K GM + +L
Sbjct: 490 VQYPVEHPDKFLKFGMQPSRGVL 512
>WB|WBGene00004503 [details] [associations]
symbol:rpt-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK
EMBL:FO081210 PIR:A88485 RefSeq:NP_498429.1
ProteinModelPortal:P46502 SMR:P46502 DIP:DIP-24412N IntAct:P46502
MINT:MINT-212949 STRING:P46502 PaxDb:P46502
EnsemblMetazoa:F23F12.6.1 EnsemblMetazoa:F23F12.6.2 GeneID:175925
KEGG:cel:CELE_F23F12.6 UCSC:F23F12.6.1 CTD:175925 WormBase:F23F12.6
GeneTree:ENSGT00550000074962 InParanoid:P46502 NextBio:890338
Uniprot:P46502
Length = 414
Score = 388 (141.6 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 86/242 (35%), Positives = 135/242 (55%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
D+ + D+ GL + E+ E V+ THGE+Y++ G+ KT+LAKAVA
Sbjct: 157 DISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVA 216
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
+F + S+FV+ Y+G G VR +++ AK+N+PS++FIDE+DA+ +R +
Sbjct: 217 ANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQTG 276
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
+E L +LL +DGF+ NV I +TNR D LDPAL+RPGR DRKI P P
Sbjct: 277 ADREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQ 336
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLL 652
+ + + ++DDVD + D + GA++ +I + A + +R+ R + T DL
Sbjct: 337 KRLVFSTVCSRMNLSDDVDLEDWVARPDKISGADINSICQEAGMQAVRENRYVVLTKDLE 396
Query: 653 QA 654
+A
Sbjct: 397 KA 398
>UNIPROTKB|Q5R8D7 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9601 "Pongo abelii" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:CR859816 RefSeq:NP_001126144.1
UniGene:Pab.13078 ProteinModelPortal:Q5R8D7 PRIDE:Q5R8D7
GeneID:100173102 KEGG:pon:100173102 InParanoid:Q5R8D7
Uniprot:Q5R8D7
Length = 433
Score = 386 (140.9 bits), Expect = 3.9e-35, P = 3.9e-35
Identities = 94/249 (37%), Positives = 134/249 (53%)
Query: 409 LERGVDVKFSDVAGLGKIRLE-LEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTL 466
+E DV +SDV G K ++E L E+V+ H E + G+ KTL
Sbjct: 166 VEEKPDVTYSDVGGC-KEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 224
Query: 467 LAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRER 526
A+AVA F + S+ V+ YVG GA VR L++ A+ ++F DE+DA+G R
Sbjct: 225 CARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGAR 284
Query: 527 GLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFI 585
G+GG E T+ +L+ LDGF+ RGN+ + +TNRPD LDPAL+RPGR DRKI
Sbjct: 285 -FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEF 343
Query: 586 PKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTE 645
P L GR ILK+HAR + D+ + +A + GAE+ ++ A + +R R
Sbjct: 344 SLPDLEGRTHILKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 403
Query: 646 ITTDDLLQA 654
T D L+A
Sbjct: 404 ATEKDFLEA 412
>POMBASE|SPBC4.07c [details] [associations]
symbol:rpt2 "19S proteasome regulatory subunit Rpt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC4.07c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016887
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03062 OMA:FIRNQER EMBL:Z29366 PIR:S39348
RefSeq:NP_595480.1 ProteinModelPortal:P36612 IntAct:P36612
STRING:P36612 PRIDE:P36612 EnsemblFungi:SPBC4.07c.1 GeneID:2540939
KEGG:spo:SPBC4.07c OrthoDB:EOG4FN7S6 NextBio:20802054
Uniprot:P36612
Length = 448
Score = 386 (140.9 bits), Expect = 3.9e-35, P = 3.9e-35
Identities = 85/250 (34%), Positives = 135/250 (54%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLL 467
L++ ++D+ GL E++E V+ TH E+Y G++ KTLL
Sbjct: 182 LDKAPTESYADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLL 241
Query: 468 AKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG 527
AKAVA + F + S+ ++ Y+G G VR L+ A++++PS+VFIDE+DA+G +R
Sbjct: 242 AKAVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKRY 301
Query: 528 LIKGSGGQERDATLNQLLVCLDGFE-GRGNVITIASTNRPDILDPALVRPGRFDRKIFIP 586
+ +E T+ +LL LDGF+ + ++ I +TNR LDPAL+RPGR DRKI
Sbjct: 302 DAQSGAEREIQRTMLELLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILFE 361
Query: 587 KPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEI 646
P + +I +H K + +DV+ + D + GAE+ IV A + +R+ R +
Sbjct: 362 NPDEATKRKIFTIHTSKMNLGEDVNLEELIQCKDDLSGAEIKAIVSEAGLLALRERRMRV 421
Query: 647 TTDDLLQAAQ 656
DD QA +
Sbjct: 422 VMDDFRQARE 431
>FB|FBgn0032450 [details] [associations]
symbol:CG5776 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014134 GO:GO:0006200 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 KO:K14575 GeneTree:ENSGT00700000104502 OMA:MLLRCVA
EMBL:AY051725 RefSeq:NP_609585.1 UniGene:Dm.8715 SMR:Q9VK63
EnsemblMetazoa:FBtr0080407 EnsemblMetazoa:FBtr0329925 GeneID:34680
KEGG:dme:Dmel_CG5776 UCSC:CG5776-RA FlyBase:FBgn0032450
InParanoid:Q9VK63 OrthoDB:EOG4547DV GenomeRNAi:34680 NextBio:789659
Uniprot:Q9VK63
Length = 799
Score = 405 (147.6 bits), Expect = 7.8e-35, P = 7.8e-35
Identities = 90/263 (34%), Positives = 150/263 (57%)
Query: 380 QNPHLKMAMQFMKSGARVRRAYGKGLPQYLERGVDVKFSDVAGLGKIRLELEEIVKF-FT 438
Q PHL+ A+ +K A + + L +V++SD+ G ++RL +++ +++
Sbjct: 506 QMPHLQAALTRIKPSA---------MREVLIECPNVQWSDIGGQSELRLAMQQAIEWPLL 556
Query: 439 HGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASR 498
H + ++R G++ KT++AKA+A E+ +NF SI + ++VG
Sbjct: 557 HADKFQRLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFLSIKGPELFSMWVGESERA 616
Query: 499 VRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS--GGQERDATLNQLLVCLDGFEGRGN 556
VR ++++A+ AP++VF DE+DA+G ER GS G ++ L QLL LDG E N
Sbjct: 617 VREVFRKARQVAPAIVFFDEIDAIGGERSEGDGSSSGSSVKERVLTQLLTELDGVEALQN 676
Query: 557 VITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVA 616
V +A+TNRPD++D AL+RPGR DR +++ P R EILK+ R P+++DVD +
Sbjct: 677 VTIVAATNRPDMIDKALLRPGRIDRILYVGLPQCEARREILKIKLRAMPISNDVDMEKLV 736
Query: 617 SMTDGMVGAELANIVEVAAINMM 639
+T+G GAE+ + AA+ +
Sbjct: 737 QLTEGYSGAEIQAVCHEAALRAL 759
>UNIPROTKB|P46472 [details] [associations]
symbol:psmc2 "26S protease regulatory subunit 7"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:X80157 EMBL:BC054143 PIR:S53709
RefSeq:NP_001084136.1 UniGene:Xl.57157 ProteinModelPortal:P46472
GeneID:399327 KEGG:xla:399327 Xenbase:XB-GENE-1000023
Uniprot:P46472
Length = 433
Score = 383 (139.9 bits), Expect = 8.3e-35, P = 8.3e-35
Identities = 93/249 (37%), Positives = 133/249 (53%)
Query: 409 LERGVDVKFSDVAGLGKIRLE-LEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTL 466
+E DV +SDV G K ++E L E+V+ H E + G+ KTL
Sbjct: 166 VEEKPDVTYSDVGGC-KEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 224
Query: 467 LAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRER 526
A+AVA F + S+ V+ YVG GA VR L++ A+ ++F DE+DA+G R
Sbjct: 225 CARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGAR 284
Query: 527 GLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFI 585
G+GG E T+ +L+ LDGF+ RGN+ + +TNRPD LDPAL+RPGR DRKI
Sbjct: 285 -FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEF 343
Query: 586 PKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTE 645
P L GR I K+HAR + D+ + +A + GAE+ ++ A + +R R
Sbjct: 344 SLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKV 403
Query: 646 ITTDDLLQA 654
T D L+A
Sbjct: 404 ATEKDFLEA 412
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 383 (139.9 bits), Expect = 8.3e-35, P = 8.3e-35
Identities = 90/249 (36%), Positives = 138/249 (55%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLL 467
+E+ D + V GL E++E+++ H E++ G+ KTLL
Sbjct: 166 VEKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 225
Query: 468 AKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG 527
A+AVA F +S S+ V+ ++G GA VR L+ A+++APS++F+DE+D++G R
Sbjct: 226 ARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR- 284
Query: 528 LIKGS-GGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFI 585
++GS GG E T+ +LL LDGFE N+ I +TNR DILD AL+RPGR DRKI
Sbjct: 285 -VEGSRGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEF 343
Query: 586 PKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTE 645
P P R +ILK+H+RK + + +A G GAE+ ++ A + +R+ R
Sbjct: 344 PAPDEKARAQILKIHSRKMNLMRGIRMDKIAEQIPGASGAEVKSVCTEAGMFALRERRIH 403
Query: 646 ITTDDLLQA 654
+T +D A
Sbjct: 404 VTQEDFEMA 412
>UNIPROTKB|E1C4V5 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
Length = 424
Score = 382 (139.5 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 93/249 (37%), Positives = 133/249 (53%)
Query: 409 LERGVDVKFSDVAGLGKIRLE-LEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTL 466
+E DV +SDV G K ++E L E+V+ H E + G+ KTL
Sbjct: 157 VEEKPDVTYSDVGGC-KEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 215
Query: 467 LAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRER 526
A+AVA F + S+ V+ YVG GA VR L++ A+ ++F DE+DA+G R
Sbjct: 216 CARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGAR 275
Query: 527 GLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFI 585
G+GG E T+ +L+ LDGF+ RGN+ + +TNRPD LDPAL+RPGR DRKI
Sbjct: 276 -FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEF 334
Query: 586 PKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTE 645
P L GR I K+HAR + D+ + +A + GAE+ ++ A + +R R
Sbjct: 335 SLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 394
Query: 646 ITTDDLLQA 654
T D L+A
Sbjct: 395 ATEKDFLEA 403
>UNIPROTKB|F1NFL8 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
Uniprot:F1NFL8
Length = 432
Score = 382 (139.5 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 93/249 (37%), Positives = 133/249 (53%)
Query: 409 LERGVDVKFSDVAGLGKIRLE-LEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTL 466
+E DV +SDV G K ++E L E+V+ H E + G+ KTL
Sbjct: 165 VEEKPDVTYSDVGGC-KEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 223
Query: 467 LAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRER 526
A+AVA F + S+ V+ YVG GA VR L++ A+ ++F DE+DA+G R
Sbjct: 224 CARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGAR 283
Query: 527 GLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFI 585
G+GG E T+ +L+ LDGF+ RGN+ + +TNRPD LDPAL+RPGR DRKI
Sbjct: 284 -FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEF 342
Query: 586 PKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTE 645
P L GR I K+HAR + D+ + +A + GAE+ ++ A + +R R
Sbjct: 343 SLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 402
Query: 646 ITTDDLLQA 654
T D L+A
Sbjct: 403 ATEKDFLEA 411
>UNIPROTKB|Q5E9F9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
Uniprot:Q5E9F9
Length = 433
Score = 382 (139.5 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 93/249 (37%), Positives = 133/249 (53%)
Query: 409 LERGVDVKFSDVAGLGKIRLE-LEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTL 466
+E DV +SDV G K ++E L E+V+ H E + G+ KTL
Sbjct: 166 VEEKPDVTYSDVGGC-KEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 224
Query: 467 LAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRER 526
A+AVA F + S+ V+ YVG GA VR L++ A+ ++F DE+DA+G R
Sbjct: 225 CARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGAR 284
Query: 527 GLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFI 585
G+GG E T+ +L+ LDGF+ RGN+ + +TNRPD LDPAL+RPGR DRKI
Sbjct: 285 -FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEF 343
Query: 586 PKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTE 645
P L GR I K+HAR + D+ + +A + GAE+ ++ A + +R R
Sbjct: 344 SLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 403
Query: 646 ITTDDLLQA 654
T D L+A
Sbjct: 404 ATEKDFLEA 412
>UNIPROTKB|F1PPH7 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
Uniprot:F1PPH7
Length = 433
Score = 382 (139.5 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 93/249 (37%), Positives = 133/249 (53%)
Query: 409 LERGVDVKFSDVAGLGKIRLE-LEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTL 466
+E DV +SDV G K ++E L E+V+ H E + G+ KTL
Sbjct: 166 VEEKPDVTYSDVGGC-KEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 224
Query: 467 LAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRER 526
A+AVA F + S+ V+ YVG GA VR L++ A+ ++F DE+DA+G R
Sbjct: 225 CARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGAR 284
Query: 527 GLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFI 585
G+GG E T+ +L+ LDGF+ RGN+ + +TNRPD LDPAL+RPGR DRKI
Sbjct: 285 -FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEF 343
Query: 586 PKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTE 645
P L GR I K+HAR + D+ + +A + GAE+ ++ A + +R R
Sbjct: 344 SLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 403
Query: 646 ITTDDLLQA 654
T D L+A
Sbjct: 404 ATEKDFLEA 412
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 382 (139.5 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 93/249 (37%), Positives = 133/249 (53%)
Query: 409 LERGVDVKFSDVAGLGKIRLE-LEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTL 466
+E DV +SDV G K ++E L E+V+ H E + G+ KTL
Sbjct: 29 VEEKPDVTYSDVGGC-KEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 87
Query: 467 LAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRER 526
A+AVA F + S+ V+ YVG GA VR L++ A+ ++F DE+DA+G R
Sbjct: 88 CARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGAR 147
Query: 527 GLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFI 585
G+GG E T+ +L+ LDGF+ RGN+ + +TNRPD LDPAL+RPGR DRKI
Sbjct: 148 -FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEF 206
Query: 586 PKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTE 645
P L GR I K+HAR + D+ + +A + GAE+ ++ A + +R R
Sbjct: 207 SLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 266
Query: 646 ITTDDLLQA 654
T D L+A
Sbjct: 267 ATEKDFLEA 275
>UNIPROTKB|P35998 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
Length = 433
Score = 382 (139.5 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 93/249 (37%), Positives = 133/249 (53%)
Query: 409 LERGVDVKFSDVAGLGKIRLE-LEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTL 466
+E DV +SDV G K ++E L E+V+ H E + G+ KTL
Sbjct: 166 VEEKPDVTYSDVGGC-KEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 224
Query: 467 LAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRER 526
A+AVA F + S+ V+ YVG GA VR L++ A+ ++F DE+DA+G R
Sbjct: 225 CARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGAR 284
Query: 527 GLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFI 585
G+GG E T+ +L+ LDGF+ RGN+ + +TNRPD LDPAL+RPGR DRKI
Sbjct: 285 -FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEF 343
Query: 586 PKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTE 645
P L GR I K+HAR + D+ + +A + GAE+ ++ A + +R R
Sbjct: 344 SLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 403
Query: 646 ITTDDLLQA 654
T D L+A
Sbjct: 404 ATEKDFLEA 412
>UNIPROTKB|F1SB53 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
OMA:HIFTIHA EMBL:CU570825 Ensembl:ENSSSCT00000016802 Uniprot:F1SB53
Length = 475
Score = 382 (139.5 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 93/249 (37%), Positives = 133/249 (53%)
Query: 409 LERGVDVKFSDVAGLGKIRLE-LEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTL 466
+E DV +SDV G K ++E L E+V+ H E + G+ KTL
Sbjct: 208 VEEKPDVTYSDVGGC-KEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 266
Query: 467 LAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRER 526
A+AVA F + S+ V+ YVG GA VR L++ A+ ++F DE+DA+G R
Sbjct: 267 CARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGAR 326
Query: 527 GLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFI 585
G+GG E T+ +L+ LDGF+ RGN+ + +TNRPD LDPAL+RPGR DRKI
Sbjct: 327 -FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEF 385
Query: 586 PKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTE 645
P L GR I K+HAR + D+ + +A + GAE+ ++ A + +R R
Sbjct: 386 SLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 445
Query: 646 ITTDDLLQA 654
T D L+A
Sbjct: 446 ATEKDFLEA 454
>UNIPROTKB|I3LJ30 [details] [associations]
symbol:I3LJ30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
Ensembl:ENSSSCT00000030050 OMA:WDLAYEN Uniprot:I3LJ30
Length = 434
Score = 382 (139.5 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 93/249 (37%), Positives = 133/249 (53%)
Query: 409 LERGVDVKFSDVAGLGKIRLE-LEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTL 466
+E DV +SDV G K ++E L E+V+ H E + G+ KTL
Sbjct: 167 VEEKPDVTYSDVGGC-KEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 225
Query: 467 LAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRER 526
A+AVA F + S+ V+ YVG GA VR L++ A+ ++F DE+DA+G R
Sbjct: 226 CARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGAR 285
Query: 527 GLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFI 585
G+GG E T+ +L+ LDGF+ RGN+ + +TNRPD LDPAL+RPGR DRKI
Sbjct: 286 -FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEF 344
Query: 586 PKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTE 645
P L GR I K+HAR + D+ + +A + GAE+ ++ A + +R R
Sbjct: 345 SLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 404
Query: 646 ITTDDLLQA 654
T D L+A
Sbjct: 405 ATEKDFLEA 413
>UNIPROTKB|Q4R4R0 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9541 "Macaca fascicularis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q9WZ49
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
EMBL:AB169834 ProteinModelPortal:Q4R4R0 SMR:Q4R4R0 PRIDE:Q4R4R0
Uniprot:Q4R4R0
Length = 433
Score = 382 (139.5 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 93/249 (37%), Positives = 133/249 (53%)
Query: 409 LERGVDVKFSDVAGLGKIRLE-LEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTL 466
+E DV +SDV G K ++E L E+V+ H E + G+ KTL
Sbjct: 166 VEEKPDVTYSDVGGC-KEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 224
Query: 467 LAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRER 526
A+AVA F + S+ V+ YVG GA VR L++ A+ ++F DE+DA+G R
Sbjct: 225 CARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGAR 284
Query: 527 GLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFI 585
G+GG E T+ +L+ LDGF+ RGN+ + +TNRPD LDPAL+RPGR DRKI
Sbjct: 285 -FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEF 343
Query: 586 PKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTE 645
P L GR I K+HAR + D+ + +A + GAE+ ++ A + +R R
Sbjct: 344 SLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 403
Query: 646 ITTDDLLQA 654
T D L+A
Sbjct: 404 ATEKDFLEA 412
>MGI|MGI:109555 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit,
ATPase 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:109555 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
OrthoDB:EOG4RXZ05 ChiTaRS:PSMC2 EMBL:AK005083 EMBL:AK168548
EMBL:BC005462 EMBL:U61283 IPI:IPI00270326 PIR:S39349
UniGene:Mm.2462 ProteinModelPortal:P46471 SMR:P46471 IntAct:P46471
STRING:P46471 PhosphoSite:P46471 REPRODUCTION-2DPAGE:P46471
SWISS-2DPAGE:P46471 PaxDb:P46471 PRIDE:P46471 InParanoid:P46471
Bgee:P46471 Genevestigator:P46471 GermOnline:ENSMUSG00000028932
Uniprot:P46471
Length = 433
Score = 382 (139.5 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 93/249 (37%), Positives = 133/249 (53%)
Query: 409 LERGVDVKFSDVAGLGKIRLE-LEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTL 466
+E DV +SDV G K ++E L E+V+ H E + G+ KTL
Sbjct: 166 VEEKPDVTYSDVGGC-KEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 224
Query: 467 LAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRER 526
A+AVA F + S+ V+ YVG GA VR L++ A+ ++F DE+DA+G R
Sbjct: 225 CARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGAR 284
Query: 527 GLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFI 585
G+GG E T+ +L+ LDGF+ RGN+ + +TNRPD LDPAL+RPGR DRKI
Sbjct: 285 -FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEF 343
Query: 586 PKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTE 645
P L GR I K+HAR + D+ + +A + GAE+ ++ A + +R R
Sbjct: 344 SLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 403
Query: 646 ITTDDLLQA 654
T D L+A
Sbjct: 404 ATEKDFLEA 412
>RGD|3428 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit, ATPase
2" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA;ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03061
CTD:5701 OrthoDB:EOG4RXZ05 EMBL:D50694 EMBL:BC061542 EMBL:U13895
IPI:IPI00421600 RefSeq:NP_150239.1 UniGene:Rn.1202
ProteinModelPortal:Q63347 IntAct:Q63347 MINT:MINT-1794034
STRING:Q63347 PhosphoSite:Q63347 PRIDE:Q63347 GeneID:25581
KEGG:rno:25581 InParanoid:Q63347 NextBio:607227 Genevestigator:Q63347
GermOnline:ENSRNOG00000012026 Uniprot:Q63347
Length = 433
Score = 382 (139.5 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 93/249 (37%), Positives = 133/249 (53%)
Query: 409 LERGVDVKFSDVAGLGKIRLE-LEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTL 466
+E DV +SDV G K ++E L E+V+ H E + G+ KTL
Sbjct: 166 VEEKPDVTYSDVGGC-KEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 224
Query: 467 LAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRER 526
A+AVA F + S+ V+ YVG GA VR L++ A+ ++F DE+DA+G R
Sbjct: 225 CARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGAR 284
Query: 527 GLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFI 585
G+GG E T+ +L+ LDGF+ RGN+ + +TNRPD LDPAL+RPGR DRKI
Sbjct: 285 -FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEF 343
Query: 586 PKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTE 645
P L GR I K+HAR + D+ + +A + GAE+ ++ A + +R R
Sbjct: 344 SLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 403
Query: 646 ITTDDLLQA 654
T D L+A
Sbjct: 404 ATEKDFLEA 412
>UNIPROTKB|Q63347 [details] [associations]
symbol:Psmc2 "26S protease regulatory subunit 7"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 CTD:5701 OrthoDB:EOG4RXZ05
EMBL:D50694 EMBL:BC061542 EMBL:U13895 IPI:IPI00421600
RefSeq:NP_150239.1 UniGene:Rn.1202 ProteinModelPortal:Q63347
IntAct:Q63347 MINT:MINT-1794034 STRING:Q63347 PhosphoSite:Q63347
PRIDE:Q63347 GeneID:25581 KEGG:rno:25581 InParanoid:Q63347
NextBio:607227 Genevestigator:Q63347 GermOnline:ENSRNOG00000012026
Uniprot:Q63347
Length = 433
Score = 382 (139.5 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 93/249 (37%), Positives = 133/249 (53%)
Query: 409 LERGVDVKFSDVAGLGKIRLE-LEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTL 466
+E DV +SDV G K ++E L E+V+ H E + G+ KTL
Sbjct: 166 VEEKPDVTYSDVGGC-KEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 224
Query: 467 LAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRER 526
A+AVA F + S+ V+ YVG GA VR L++ A+ ++F DE+DA+G R
Sbjct: 225 CARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGAR 284
Query: 527 GLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFI 585
G+GG E T+ +L+ LDGF+ RGN+ + +TNRPD LDPAL+RPGR DRKI
Sbjct: 285 -FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEF 343
Query: 586 PKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTE 645
P L GR I K+HAR + D+ + +A + GAE+ ++ A + +R R
Sbjct: 344 SLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 403
Query: 646 ITTDDLLQA 654
T D L+A
Sbjct: 404 ATEKDFLEA 412
>ZFIN|ZDB-GENE-040426-1327 [details] [associations]
symbol:psmc2 "proteasome (prosome, macropain) 26S
subunit, ATPase 2" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040426-1327 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03061 OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978
OrthoDB:EOG4RXZ05 HSSP:Q9LCZ4 EMBL:BX571796 EMBL:BC053187
IPI:IPI00491385 RefSeq:NP_957260.1 UniGene:Dr.75589 STRING:Q7T3B1
Ensembl:ENSDART00000019647 GeneID:393941 KEGG:dre:393941
InParanoid:Q7T3B1 NextBio:20814913 Uniprot:Q7T3B1
Length = 433
Score = 382 (139.5 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 93/249 (37%), Positives = 133/249 (53%)
Query: 409 LERGVDVKFSDVAGLGKIRLE-LEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTL 466
+E DV +SDV G K ++E L E+V+ H E + G+ KTL
Sbjct: 166 VEEKPDVTYSDVGGC-KEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 224
Query: 467 LAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRER 526
A+AVA F + S+ V+ YVG GA VR L++ A+ ++F DE+DA+G R
Sbjct: 225 CARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGAR 284
Query: 527 GLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFI 585
G+GG E T+ +L+ LDGF+ RGN+ + +TNRPD LDPAL+RPGR DRKI
Sbjct: 285 -FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEF 343
Query: 586 PKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTE 645
P L GR I K+HAR + D+ + +A + GAE+ ++ A + +R R
Sbjct: 344 SLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 403
Query: 646 ITTDDLLQA 654
T D L+A
Sbjct: 404 ATEKDFLEA 412
>CGD|CAL0005689 [details] [associations]
symbol:RPT1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005689 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000078 EMBL:AACQ01000077
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
RefSeq:XP_715876.1 RefSeq:XP_715926.1 ProteinModelPortal:Q5A2A0
STRING:Q5A2A0 GeneID:3642412 GeneID:3642461 KEGG:cal:CaO19.441
KEGG:cal:CaO19.8071 Uniprot:Q5A2A0
Length = 444
Score = 362 (132.5 bits), Expect = 1.2e-34, Sum P(2) = 1.2e-34
Identities = 88/258 (34%), Positives = 135/258 (52%)
Query: 409 LERGVDVKFSDVAGLGKIRLE-LEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTL 466
+E DV +SDV G K ++E L E+V+ E + + G+ KTL
Sbjct: 177 VEEKPDVTYSDVGGC-KEQIEKLREVVELPLLSPERFVKLGIDPPKGILLYGPPGTGKTL 235
Query: 467 LAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRER 526
A+AVA F + S+ V+ YVG GA VR L++ A+ ++F DE+DA+G R
Sbjct: 236 CARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEVDAIGGAR 295
Query: 527 GLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFI 585
G+GG E T+ +L+ LDGF+ RGN+ + +TNRP+ LDPAL+RPGR DRK+
Sbjct: 296 -FDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEF 354
Query: 586 PKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTE 645
P L GR I ++H++ + D+ + ++ + GAEL ++ A + +R R
Sbjct: 355 SLPDLEGRANIFRIHSKTMSVEKDIRWELISRLCPNATGAELRSVCTEAGMFAIRARRKV 414
Query: 646 ITTDDLLQAAQIEERGML 663
D L+A +G L
Sbjct: 415 ANEKDFLKAVDKVIKGNL 432
Score = 43 (20.2 bits), Expect = 1.2e-34, Sum P(2) = 1.2e-34
Identities = 15/65 (23%), Positives = 26/65 (40%)
Query: 108 EQLKKWSKDLPIVSDRIAYTEIFSLKDEGKLK-HVIKSPSGSLRQKAEPVLVVLEDSRVL 166
+ LK+ KDL + +RI + D G H+ R + E L V ++++
Sbjct: 43 DSLKEIEKDLKTIEERIKTNQGIKESDTGLAPPHLWDVLGDKQRMQEEQSLQVARCTKII 102
Query: 167 RTVLP 171
P
Sbjct: 103 EASQP 107
>FB|FBgn0016983 [details] [associations]
symbol:smid "smallminded" species:7227 "Drosophila
melanogaster" [GO:0016887 "ATPase activity" evidence=ISS;NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0022008 GO:GO:0016887 HSSP:Q01853
KO:K14571 GeneTree:ENSGT00570000079239 UniGene:Dm.875 GeneID:38824
KEGG:dme:Dmel_CG8571 CTD:38824 FlyBase:FBgn0016983 GenomeRNAi:38824
NextBio:810567 RefSeq:NP_523959.2 ProteinModelPortal:Q9VS62
SMR:Q9VS62 IntAct:Q9VS62 MINT:MINT-754496 STRING:Q9VS62
PRIDE:Q9VS62 EnsemblMetazoa:FBtr0076851 UCSC:CG8571-RA
InParanoid:Q9VS62 OMA:EFDSLCP PhylomeDB:Q9VS62 ArrayExpress:Q9VS62
Bgee:Q9VS62 Uniprot:Q9VS62
Length = 944
Score = 404 (147.3 bits), Expect = 1.6e-34, P = 1.6e-34
Identities = 100/288 (34%), Positives = 155/288 (53%)
Query: 414 DVKFSDVAGLGKIRLELE-EIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
D + D+ L KIR EL+ ++ + EM R G+ KTLLAKA+A
Sbjct: 658 DTTWDDIGALEKIREELKLAVLAPVKYPEMLERLGLTAPSGVLLCGPPGCGKTLLAKAIA 717
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
EAG+NF S+ + + +YVG VR+ +Q A+++AP V+F DE D++ +R G
Sbjct: 718 NEAGINFISVKGPELMNMYVGESERAVRACFQRARNSAPCVIFFDEFDSLCPKRS-DGGD 776
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
G +NQLL +DG E R V +A+TNRPDI+DPA++RPGR D +++ P
Sbjct: 777 GNNSGTRIVNQLLTEMDGVEERKGVYILAATNRPDIIDPAILRPGRLDTILYVGFPEQSE 836
Query: 593 RMEILKVHAR--KKP-MADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITT- 648
R EILK + K+P +ADDVD +A+ T+G GA+LA +V+ A++ +R T
Sbjct: 837 RTEILKATTKNGKRPVLADDVDLDEIAAQTEGYTGADLAGLVKQASMFSLRQSLNNGDTN 896
Query: 649 -DDLLQAAQIEERGMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKN 695
DDL +Q + + + +E R++ ++ + A P L +
Sbjct: 897 LDDLCVRSQHFQEALQQLRPSVNEQDRKI-YDKLRLKYAAPRVPTLND 943
Score = 273 (101.2 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
Identities = 73/222 (32%), Positives = 113/222 (50%)
Query: 417 FSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAG 476
F D+ G+ EL E++ E Y + G+ KT LA+A++G+
Sbjct: 250 FRDIGGMDSTLKELCEMLIHIKSPEFYFQLGLLPSRGLLLHGPPGCGKTFLARAISGQLK 309
Query: 477 VNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQE 536
+ I A++ + G R+R ++ +A +P V+FIDE+DA+G R S E
Sbjct: 310 MPLMEIPATELIGGISGESEERIREVFDQAIGYSPCVLFIDEIDAIGGNRQW--ASKDME 367
Query: 537 RDATLNQLLVCLDGFEGR--G-NVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 593
R ++QL+ LD + G +V+ IA+T RPD+LDP L R GRFD +I I P R
Sbjct: 368 R-RIVSQLISSLDNLKANEFGQSVVVIAATTRPDVLDPGLRRIGRFDHEIAIHIPSRKER 426
Query: 594 MEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAA 635
EIL++ + ++Y +A +T G VGA+L +V AA
Sbjct: 427 REILRIQCEGLSVDPKLNYDKIAELTPGYVGADLMALVSRAA 468
Score = 41 (19.5 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 679 NEAAMAVVAVNFPDLKNIEFVTIAPRAGR 707
NEA + ++V P+L N+ +V + RA R
Sbjct: 718 NEAGINFISVKGPELMNM-YVGESERAVR 745
>FB|FBgn0028684 [details] [associations]
symbol:Rpt5 "Regulatory particle triple-A ATPase 5"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS;IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005937 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 HSSP:Q01853 TIGRFAMs:TIGR01242 GO:GO:0008540
ChiTaRS:PSMC3 FlyBase:FBgn0028684 EMBL:AF134402
ProteinModelPortal:Q9XZC3 STRING:Q9XZC3 PRIDE:Q9XZC3
InParanoid:Q9XZC3 ArrayExpress:Q9XZC3 Bgee:Q9XZC3 Uniprot:Q9XZC3
Length = 431
Score = 380 (138.8 bits), Expect = 1.8e-34, P = 1.8e-34
Identities = 88/246 (35%), Positives = 138/246 (56%)
Query: 410 ERGVDVKFSDVAGLGKIRLEL-EEIVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLA 468
ER + +FSD+ GL K EL E +V TH E ++ G+ KTLLA
Sbjct: 172 ERPTE-QFSDIGGLDKQIQELIEAVVLPMTHKEKFKNLGIHPPKGVILYGPPGTGKTLLA 230
Query: 469 KAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGL 528
+A A + F ++ Q V++++G GA VR + AK+ AP+++FIDELDA+G +R
Sbjct: 231 RACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFD 290
Query: 529 IKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKP 588
+ +G +E T+ +LL L+GF ++ IA+TNR DIL PAL+R GR DRKI P P
Sbjct: 291 SEKAGDREVQRTMLELLNQLNGFSSTADIKVIAATNRVDIL-PALLRSGRLDRKIEFPHP 349
Query: 589 GLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITT 648
R I+++H+RK +++DV++ ++ TD GA+ + A + +R +T
Sbjct: 350 NEEARARIMQIHSRKMNVSNDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSANSVTH 409
Query: 649 DDLLQA 654
+D + A
Sbjct: 410 EDFMDA 415
>TAIR|locus:2103555 [details] [associations]
symbol:CIP111 "Cam interacting protein 111" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IDA;TAS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GO:GO:0016887 GO:GO:0005516 HSSP:Q01853
eggNOG:COG0464 EMBL:AL390921 GO:GO:0009535 HOGENOM:HOG000223224
EMBL:AF217546 EMBL:AF217547 IPI:IPI00534707 PIR:T50927 PIR:T51257
RefSeq:NP_191228.1 UniGene:At.9830 ProteinModelPortal:Q9LET7
SMR:Q9LET7 IntAct:Q9LET7 STRING:Q9LET7 PRIDE:Q9LET7
EnsemblPlants:AT3G56690.1 GeneID:824836 KEGG:ath:AT3G56690
GeneFarm:2042 TAIR:At3g56690 InParanoid:Q9LET7 OMA:SEAKLNF
PhylomeDB:Q9LET7 ProtClustDB:CLSN2684205 Genevestigator:Q9LET7
Uniprot:Q9LET7
Length = 1022
Score = 404 (147.3 bits), Expect = 1.9e-34, P = 1.9e-34
Identities = 99/266 (37%), Positives = 147/266 (55%)
Query: 415 VKFSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAG 473
V + DV G +++ +L E V++ H + ++R G R KTL+A+AVA
Sbjct: 721 VNWEDVGGQNEVKNQLMEAVEWPQKHQDAFKRIGTRPPSGILMFGPPGCSKTLMARAVAS 780
Query: 474 EAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSG 533
EA +NF ++ + +VG VRSL+ +A+ NAPS++F DE+D++ RG + G
Sbjct: 781 EAKLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDSLASIRGK-ENDG 839
Query: 534 GQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 593
D ++QLLV LDG R V IA+TNRPD +D AL+RPGRFDR +++ P R
Sbjct: 840 VSVSDRVMSQLLVELDGLHQRVGVTVIAATNRPDKIDSALLRPGRFDRLLYVGPPNETDR 899
Query: 594 MEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG--RTEITTDDL 651
ILK+H RK P + D+ +AS+T G GA+++ I AAI + + EI+ L
Sbjct: 900 EAILKIHLRKIPCSSDICLKELASITKGYTGADISLICREAAIAALEESLEMEEISMRHL 959
Query: 652 LQA-AQIEERGMLDRKERSSETWRQV 676
A +QIE +L K S + R V
Sbjct: 960 KAAISQIEPTEILSYKALSEKFQRLV 985
Score = 290 (107.1 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 91/283 (32%), Positives = 142/283 (50%)
Query: 399 RAYGKGLPQYLE-RGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRXXXXXXXX 457
R + +GL Q+ E V + S + GL K L +I+ + G+R
Sbjct: 366 RTFVQGL-QFDEGENVGCEISKLGGLSKEYAILRDIIDSSSIKNSLSSLGLRPTKGVLIH 424
Query: 458 XXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFID 517
KT LA+ A +GVNFFS++ + + Y+G + +++ A + P+VVFID
Sbjct: 425 GPPGTGKTSLARTFARHSGVNFFSVNGPEIISQYLGESEKALDEVFRSASNATPAVVFID 484
Query: 518 ELDAVGRERGLIKGSGGQERDATL-NQLLVCLDGFEGRGNVITIASTNRPDILDPALVRP 576
+LDA+ R GG+E + LL +DG V+ IA+TNRPD ++PAL RP
Sbjct: 485 DLDAIAPARK----EGGEELSQRMVATLLNLMDGISRTDGVVVIAATNRPDSIEPALRRP 540
Query: 577 GRFDRKIFIPKPGLIGRMEILKVHAR--KKPMAD-DVDYLAVASMTDGMVGAELANIV-E 632
GR DR+I I P R +IL + R + +++ V+ LA+A T G VGA+L+ + E
Sbjct: 541 GRLDREIEIGVPSSTQRSDILHIILRGMRHSLSNIQVEQLAMA--THGFVGADLSALCCE 598
Query: 633 VAAINMMRDGRTEITTDDL-LQAAQIEERG--MLDRKERSSET 672
A + + R ++ +L L+ A I E M D SS++
Sbjct: 599 AAFVCLRRHLDQSSSSSNLPLEEAPIAESSSNMSDISSDSSDS 641
>TAIR|locus:2084163 [details] [associations]
symbol:CDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0016571 "histone
methylation" evidence=RCA] [GO:0016579 "protein deubiquitination"
evidence=RCA] [GO:0030422 "production of siRNA involved in RNA
interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC009325 GO:GO:0009524
EMBL:AY136443 EMBL:BT002135 IPI:IPI00547846 RefSeq:NP_186810.2
UniGene:At.27731 UniGene:At.63552 ProteinModelPortal:Q9SS94
SMR:Q9SS94 IntAct:Q9SS94 PaxDb:Q9SS94 PRIDE:Q9SS94
EnsemblPlants:AT3G01610.1 GeneID:821105 KEGG:ath:AT3G01610
GeneFarm:1903 TAIR:At3g01610 InParanoid:Q9SS94 KO:K14571
OMA:REGFTTI PhylomeDB:Q9SS94 ProtClustDB:CLSN2720022
Genevestigator:Q9SS94 GermOnline:AT3G01610 Uniprot:Q9SS94
Length = 820
Score = 408 (148.7 bits), Expect = 1.9e-34, Sum P(2) = 1.9e-34
Identities = 99/247 (40%), Positives = 138/247 (55%)
Query: 414 DVKFSDVAGLGKIRLELEE-IVKFFTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVA 472
DVK+ DV GL +RL+ IV+ ++Y+ GV KTL+AKA A
Sbjct: 524 DVKWDDVGGLDHLRLQFNRYIVRPIKKPDIYKAFGVDLETGFLLYGPPGCGKTLIAKAAA 583
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
EAG NF I ++ + YVG +R+L+Q A+ AP V+F DE+DA+ RG +G+
Sbjct: 584 NEAGANFMHIKGAELLNKYVGESELAIRTLFQRARTCAPCVIFFDEVDALTTSRGK-EGA 642
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
ER LNQ LV LDG E R NV I +TNRPD++DPA +RPGRF +++P P
Sbjct: 643 WVVER--LLNQFLVELDGGERR-NVYVIGATNRPDVVDPAFLRPGRFGNLLYVPLPNADE 699
Query: 593 RMEILKVHARKKPMADDVDYLAVASMT-DGMVGAELANIVEVAAINMMRD--GRTEITTD 649
R ILK ARKKP+ VD +A +G GA+LA++V+ A + + G +E + D
Sbjct: 700 RASILKAIARKKPIDPSVDLDGIAKNNCEGFSGADLAHLVQKATFQAVEEMIGSSESSED 759
Query: 650 DLLQAAQ 656
D+ Q
Sbjct: 760 DVTDITQ 766
Score = 332 (121.9 bits), Expect = 1.2e-25, Sum P(2) = 1.2e-25
Identities = 89/248 (35%), Positives = 128/248 (51%)
Query: 417 FSDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEA 475
F D G+ KI ELE V F + E +++ GV+ KT LA A+A EA
Sbjct: 232 FKDFGGIKKILDELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTKLANAIANEA 291
Query: 476 GVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQ 535
GV F+ ISA++ + G +R L+ +A APS+VFIDE+DA+G +R + +
Sbjct: 292 GVPFYKISATEVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIGSKR---ENQQRE 348
Query: 536 ERDATLNQLLVCLDGFEGRGN----------VITIASTNRPDILDPALVRPGRFDRKIFI 585
+ QLL C+DG +G+ V+ I +TNRPD LDPAL R GRF+ +I +
Sbjct: 349 MEKRIVTQLLTCMDGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIAL 408
Query: 586 PKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVA---AINMMRDG 642
P R EIL V A+K + D +A +T G VGA+L ++ +A AI + D
Sbjct: 409 TAPDEDARAEILSVVAQKLRLEGPFDKKRIARLTPGFVGADLESVAYLAGRKAIKRILDS 468
Query: 643 RTEITTDD 650
R + D
Sbjct: 469 RKSEQSGD 476
Score = 37 (18.1 bits), Expect = 1.9e-34, Sum P(2) = 1.9e-34
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 295 NYRYMANVWENLAKDSTVA 313
N RY++ V + KD + A
Sbjct: 17 NRRYLSQVMDTCGKDLSTA 35
>GENEDB_PFALCIPARUM|PF13_0063 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory
subunit 7, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511
GO:GO:0017111 EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0005838 KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177
RefSeq:XP_001349843.2 ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3
MINT:MINT-1698409 PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA
GeneID:814041 KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500
Uniprot:Q8IEK3
Length = 420
Score = 378 (138.1 bits), Expect = 3.0e-34, P = 3.0e-34
Identities = 90/248 (36%), Positives = 131/248 (52%)
Query: 409 LERGVDVKFSDVAGLGKIRLE-LEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTL 466
+E D+ ++D+ G K +LE L E+V+ E + G+ KTL
Sbjct: 153 VEEKPDITYNDIGGC-KEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKTL 211
Query: 467 LAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRER 526
A+A+A F + S+ V+ YVG GA VR L+Q AK ++FIDE+DA+G R
Sbjct: 212 TARAIANRTDACFICVIGSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVDAIGGSR 271
Query: 527 GLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIP 586
G G E T+ +++ LDGF+ RGN+ + +TNRPD LD ALVRPGR DR+I
Sbjct: 272 GDESAHGDHEVQRTMLEIVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGRIDRRIEFS 331
Query: 587 KPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEI 646
P L GR I K+HA M+ DV + +A + G+++ ++ A + +R R I
Sbjct: 332 LPDLEGRTHIFKIHANTMNMSRDVRFELLARLCPNSTGSDIRSVCTEAGMFAIRARRKTI 391
Query: 647 TTDDLLQA 654
T DLL A
Sbjct: 392 TEKDLLLA 399
>UNIPROTKB|Q8IEK3 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory subunit 7,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 GO:GO:0017111
EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0005838
KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177 RefSeq:XP_001349843.2
ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3 MINT:MINT-1698409
PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA GeneID:814041
KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500 Uniprot:Q8IEK3
Length = 420
Score = 378 (138.1 bits), Expect = 3.0e-34, P = 3.0e-34
Identities = 90/248 (36%), Positives = 131/248 (52%)
Query: 409 LERGVDVKFSDVAGLGKIRLE-LEEIVKF-FTHGEMYRRRGVRXXXXXXXXXXXXXXKTL 466
+E D+ ++D+ G K +LE L E+V+ E + G+ KTL
Sbjct: 153 VEEKPDITYNDIGGC-KEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKTL 211
Query: 467 LAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRER 526
A+A+A F + S+ V+ YVG GA VR L+Q AK ++FIDE+DA+G R
Sbjct: 212 TARAIANRTDACFICVIGSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVDAIGGSR 271
Query: 527 GLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIP 586
G G E T+ +++ LDGF+ RGN+ + +TNRPD LD ALVRPGR DR+I
Sbjct: 272 GDESAHGDHEVQRTMLEIVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGRIDRRIEFS 331
Query: 587 KPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEI 646
P L GR I K+HA M+ DV + +A + G+++ ++ A + +R R I
Sbjct: 332 LPDLEGRTHIFKIHANTMNMSRDVRFELLARLCPNSTGSDIRSVCTEAGMFAIRARRKTI 391
Query: 647 TTDDLLQA 654
T DLL A
Sbjct: 392 TEKDLLLA 399
WARNING: HSPs involving 398 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.396 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 795 665 0.00098 120 3 11 22 0.38 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 648
No. of states in DFA: 614 (65 KB)
Total size of DFA: 339 KB (2171 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 50.84u 0.10s 50.94t Elapsed: 00:00:02
Total cpu time: 50.89u 0.10s 50.99t Elapsed: 00:00:02
Start: Thu May 9 18:36:00 2013 End: Thu May 9 18:36:02 2013
WARNINGS ISSUED: 2