BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003796
(795 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5SWD9|TSR1_MOUSE Pre-rRNA-processing protein TSR1 homolog OS=Mus musculus GN=Tsr1
PE=2 SV=1
Length = 803
Score = 489 bits (1258), Expect = e-137, Method: Compositional matrix adjust.
Identities = 311/784 (39%), Positives = 434/784 (55%), Gaps = 58/784 (7%)
Query: 27 TAAKD-KSRIG-KSDCNVAKGAKAARVQRNK--MLRDQKRLALLKEKRASSGIASPPRVI 82
+A +D K R+G K C K + QR++ LR QKR ++L EKR PP +
Sbjct: 26 SAQRDSKGRVGPKILCKKLKRQLSRIDQRHRASQLRKQKRESVLAEKRQLGSKDGPPHQV 85
Query: 83 VLFGLSASVNLNSVREDLLRQLSSEGTGALSSTVSSSKYRLRTSVLQ-------APHGDL 135
++ L + ++L + L Q GT LS S+ + L L+ A GDL
Sbjct: 86 LVVPLHSRISLPEAFK--LLQNEDLGTVYLSERGSTQSFMLLCPSLKHRWFFTYARPGDL 143
Query: 136 VGCMEMAKVADLVAFVASASSFSEESMSYYIDSFGNQCLSVFRSLGLPSTAVLIRDLPT- 194
++MAKVAD + F+ DS G+ CLS + GLP+ + ++ L
Sbjct: 144 HTLLDMAKVADTILFLLDPLE--------GWDSTGDYCLSCLFAQGLPTYTLAVQGLSGF 195
Query: 195 DLKKRKDLKKMCISSLTSEFPEDCKFYAADTKDELHKFLWLFKEQRLTVPHWRNQRPFLM 254
KK+ D +K + FPED K DT+ E L Q+ +R++R +L
Sbjct: 196 PPKKQIDARKKLSKMVEKRFPED-KLLLLDTQQESGMLLRQLANQKQRHLAFRDRRAYLF 254
Query: 255 AQKVDVVADDCNSGKCTLLLHGYLRAHCLSVNQLVHISGAGDFQLGKIEILKDPFPLNAR 314
A D V + + TL + GY+R L+VN L+HI G GDFQ+ +I+ DPFPLN R
Sbjct: 255 AHVADFVPSEESDLVGTLKISGYVRGRTLNVNSLLHIVGHGDFQMNQIDAPVDPFPLNPR 314
Query: 315 ------KESDAME-------SDEIHDLEVIRTLSPDPLKLEPLLVENVPDPLAGEQTWPT 361
K + AME D DL+V+ + DP E L E +PDP+ GEQTWPT
Sbjct: 315 VIKSQKKPNMAMEVCVTDAAPDMEEDLKVL--MKADPDHQESLQTEAIPDPMEGEQTWPT 372
Query: 362 EAEMAEADQNQKHRKQKKRALPRGTSEYQAAWIVDDSDEADSDSDNDADDGMVLDQEDRG 421
E E+ EAD K R + + +P+GTS YQA WI+D+ DE+D + G D + G
Sbjct: 373 EEELDEADDLLKQRSRVVKKVPKGTSSYQAEWILDEGDESDGEG------GEYDDIQHEG 426
Query: 422 FPGYEGTNNSDIDDDQASLNFRYADDGTENDSVMMEGEILTREQIEDEIKKIKEAHAEDE 481
F E + S ++++ + ++ + E + E E ++K K+ E E
Sbjct: 427 FMEEESQDGSGEEEEEECETMTLGESVRDD----LYDEKVDAEDEERMLEKYKQERLE-E 481
Query: 482 EFPDEVDTPLDVPARKRFAKYRGLKSFRTSSWDPKESLPPEYARIFAFDKFTRTQKHVFA 541
FPDE+DTP DV AR RF KYRGLKSFRTS WDPKE+LP +YARIF F F T+K +F
Sbjct: 482 MFPDEMDTPRDVAARIRFQKYRGLKSFRTSPWDPKENLPRDYARIFQFQNFVNTRKRIFK 541
Query: 542 NALKMEQENMDDSVPASLYVRLHIKEVPAGIAHRLCEMAERSPLIASGLLQHESKMSVLH 601
+ E E + YV LH+ +VP + + A PLIA LL +E KMSVL+
Sbjct: 542 EIEEKEAEGAE----VGWYVTLHVSDVPVSVVEYFRQGA---PLIAFSLLPYEQKMSVLN 594
Query: 602 FSVKKHDTYDAPIKAKEELIFHVGFRQFVARPIFSSDNMNSDKHKMERFLHAGCFSVASI 661
V ++ P+KAKEELIFH GFR+F A P+FS + +DKHK +RFL A V ++
Sbjct: 595 MVVSRNPGNTEPVKAKEELIFHCGFRRFRASPLFSQ-HTAADKHKFQRFLTADAAFVVTV 653
Query: 662 YAPICFPPLPLIVLKSADGGVAPAVAAVGSLRSIDPDRIILKKIVLTGYPQRVSKLKAIV 721
+API FPP +++ K G+ ++ A G L S+DPDR+++K++VL+G+P ++ A+V
Sbjct: 654 FAPITFPPASVLLFKQRRNGMH-SLIATGHLFSVDPDRMVIKRVVLSGHPFKIFTKMAVV 712
Query: 722 RYMFHNPEDVRWFKPVEVWTKCGRRGRIKEPVGTHGAMKCVFNGILQQRDTVCMSLYKRA 781
RYMF N EDV WFKPVE+ TK GRRG IKEP+GTHG MKC F+G L+ +DTV M+LYKR
Sbjct: 713 RYMFFNREDVMWFKPVELRTKWGRRGHIKEPLGTHGHMKCSFDGKLKSQDTVLMNLYKRV 772
Query: 782 YPKW 785
+PKW
Sbjct: 773 FPKW 776
>sp|Q5XGY1|TSR1_XENLA Pre-rRNA-processing protein TSR1 homolog OS=Xenopus laevis GN=tsr1
PE=2 SV=1
Length = 815
Score = 488 bits (1257), Expect = e-137, Method: Compositional matrix adjust.
Identities = 322/812 (39%), Positives = 453/812 (55%), Gaps = 65/812 (8%)
Query: 3 GSRVQVNKSHKS-RFSTKSSR---NLHKTAAKDKSRIGKSDCNVAKGAKAARVQRNKMLR 58
G+ Q NK HKS R + ++ N + AAK + K D K R + +R
Sbjct: 13 GAYKQQNKPHKSGRHRGRGAQDRENKGRVAAKILGKKNKKDLR-----KLDRRHKANQIR 67
Query: 59 DQKRLALLKEKRASSGIASPPRVIVLFGLSASVNLNSVREDLLRQL-SSEG--------- 108
Q++ A+L EKR+ PP +++ L A +V++DL + ++EG
Sbjct: 68 RQRKDAVLAEKRSLGTKDGPPHLVIAISLHA----RAVKDDLFSLVQNNEGDILHVNDQI 123
Query: 109 TGALSSTVSSSKYRLRTSVLQAPHGDLVGCMEMAKVADLVAFVASASSFSEESMSYYIDS 168
G L+ + K + R +QA DL +++AKVAD + F+ DS
Sbjct: 124 KGLLA--LVCPKVKQRWCFIQANRDDLCSLLDLAKVADTLLFLLDPQEG--------WDS 173
Query: 169 FGNQCLSVFRSLGLPSTAVLIRDLP-TDLKKRKDLKKMCISSLTSEFPEDCKFYAADTKD 227
+G+ CLS + GLPS + ++ + +KKR D+KK + + F D K + DT+
Sbjct: 174 YGDYCLSCLFAQGLPSYVLAVQGMNYIPIKKRADIKKQLSKVIENRF-TDAKLFQLDTEQ 232
Query: 228 ELHKFLWLFKEQRLTVPHWRNQRPFLMAQKVDVVADDCNSGKCTLLLHGYLRAHCLSVNQ 287
E + Q+ +R++R +++AQ+ D D + TL L GY+R L+VN+
Sbjct: 233 EAAVLIRQISTQKQRHLAFRSRRSYMLAQRADFQPTDESGLVGTLKLSGYVRGQELNVNR 292
Query: 288 LVHISGAGDFQLGKIEILKDPFPLNAR------KESDAME-SDEI-------HDLEVIRT 333
LVHI G GDF + +I+ DP+PLN R K ME SDE D++V+
Sbjct: 293 LVHIVGHGDFHMSQIDAPPDPYPLNPRVHKPKTKSGQDMEMSDEPATGSEMEQDIKVL-- 350
Query: 334 LSPDPLKLEPLLVENVPDPLAGEQTWPTEAEMAEADQNQKHRKQKKRALPRGTSEYQAAW 393
+ DP E L E VPDP+ GEQTWPTE E+ EA+ K + + +P+GTS YQAAW
Sbjct: 351 MKADPSAQESLQCEVVPDPMEGEQTWPTEEELKEAEDALKGTSKVVKKVPKGTSAYQAAW 410
Query: 394 IVDDSDEADSDSDNDADDGMVLDQEDRGFPGYEGTNNSDIDDDQASLNFRYADDGTENDS 453
I+DD + + +SD+D D+ M D ED Y + +++ D T +D
Sbjct: 411 ILDDEGDGEEESDDDDDEDMEEDAEDAMDDAYSEEEDGSGNEEAEESETLTIPDSTRDDK 470
Query: 454 VMMEGEILTREQIEDEIKKIKEAHAEDEEFPDEVDTPLDVPARKRFAKYRGLKSFRTSSW 513
+ EQ E+++ + + +DE FPDEVDTP D AR RF KYRGLKSFRTS W
Sbjct: 471 Y----DENVDEQEEEQMLEKYKLQRQDEVFPDEVDTPRDQIARIRFQKYRGLKSFRTSPW 526
Query: 514 DPKESLPPEYARIFAFDKFTRTQKHVFANALKMEQENMDDSVPASLYVRLHIKEVPAGIA 573
D KE+LP +YARIF F F RT+K VF E+E D+ YV +HI VP +
Sbjct: 527 DVKENLPRDYARIFQFHDFFRTRKRVFK-----EEEEKDEGAMVGWYVTVHISAVPVSV- 580
Query: 574 HRLCEMAERSPLIASGLLQHESKMSVLHFSVKKHDTYDAPIKAKEELIFHVGFRQFVARP 633
+ PL+ LL HE KMSV++ V++H + PIKAKEELIFH GFR+F A P
Sbjct: 581 --MEHFKHGLPLVLCSLLPHEQKMSVMNMLVRRHPGNNEPIKAKEELIFHCGFRRFRASP 638
Query: 634 IFSSDNMNSDKHKMERFLHAGCFSVASIYAPICFPPLPLIVLKSADGGVAPAVAAVGSLR 693
+FS + ++DKHK ERFL + V ++YAPI FPP ++V K G+ VA GSL
Sbjct: 639 LFSQHS-SADKHKSERFLRSDTSVVVTVYAPITFPPASVLVFKQRYNGMQDLVAT-GSLL 696
Query: 694 SIDPDRIILKKIVLTGYPQRVSKLKAIVRYMFHNPEDVRWFKPVEVWTKCGRRGRIKEPV 753
+++PDRI++K+IVL+G+P ++ K A+VRYMF N EDV WFKPVE+ TK GRRG IKEP+
Sbjct: 697 NVNPDRIVIKRIVLSGHPFKIMKRTAVVRYMFFNREDVLWFKPVELRTKWGRRGHIKEPL 756
Query: 754 GTHGAMKCVFNGILQQRDTVCMSLYKRAYPKW 785
GTHG MKC F+G L+ +DTV M+LYKR YPKW
Sbjct: 757 GTHGHMKCHFDGQLKSQDTVLMNLYKRVYPKW 788
>sp|Q5R434|TSR1_PONAB Pre-rRNA-processing protein TSR1 homolog OS=Pongo abelii GN=TSR1
PE=2 SV=1
Length = 805
Score = 481 bits (1239), Expect = e-135, Method: Compositional matrix adjust.
Identities = 317/812 (39%), Positives = 456/812 (56%), Gaps = 69/812 (8%)
Query: 3 GSRVQVNKSHKSRFSTKSSRNLHKTAAK--DKSRIGKSDCNVAKGAKAARV---QRNKML 57
G+ Q NK+HK R+ + +A+ K R+ + + +RV R L
Sbjct: 7 GTLKQQNKAHKG------GRHRGRGSAQRDGKGRLALKTLSKKVRKELSRVDQRHRASQL 60
Query: 58 RDQKRLALLKEKRASSGIASPPRVIVLFGLSASVNLNSVREDLLRQLSSEGTGALSSTVS 117
R QK+ A+L EKR G PP +++ L + ++L + L Q GT L+ +
Sbjct: 61 RKQKKEAVLAEKRQLGGKDGPPHQVLVVPLHSRISLPEAMQ--LLQDRDTGTVHLNELGN 118
Query: 118 SSKYRL-------RTSVLQAPHGDLVGCMEMAKVADLVAFVASASSFSEESMSYYIDSFG 170
+ + L R A GDL ++MAKVAD + F+ DS G
Sbjct: 119 TQSFMLLCPRLKHRWFFTSARPGDLHIVLDMAKVADTILFLLDPLE--------GWDSTG 170
Query: 171 NQCLSVFRSLGLPSTAVLIRDLP-TDLKKRKDLKKMCISSLTSEFPEDCKFYAADTKDEL 229
+ CLS + GLP+ + ++ + LKK+ D +K ++ FP D K DT+ E
Sbjct: 171 DYCLSCLFAQGLPTYTLAVQGISGLPLKKQIDARKKLSKAVEKRFPHD-KLLLLDTQQEA 229
Query: 230 HKFLWLFKEQRLTVPHWRNQRPFLMAQKVDVVADDCNSGKCTLLLHGYLRAHCLSVNQLV 289
L Q+ +R++R +L A+ VD VA + N+ TL + GY+R L+VN+L+
Sbjct: 230 GMLLRQLANQKQQHLAFRDRRAYLFARAVDFVASEENNLVGTLKISGYVRGQTLNVNRLL 289
Query: 290 HISGAGDFQLGKIEILKDPFPLNAR-----KESD-AME---SDEIHDLE--VIRTLSPDP 338
HI G GDFQ+ +I+ DPFPLN R K+ D AME +D + D+E + + DP
Sbjct: 290 HIVGHGDFQMKQIDAPGDPFPLNPRGIKPQKDPDMAMEICATDTVDDMEEGLKVLMKADP 349
Query: 339 LKLEPLLVENVPDPLAGEQTWPTEAEMAEADQNQKHRKQKKRALPRGTSEYQAAWIVDDS 398
+ E L E +PDP+ GEQTWPTE E++EA K + + +P+GTS YQA WI+D
Sbjct: 350 DRQESLQAEVIPDPMEGEQTWPTEEELSEAKDFLKESSKVVKKVPKGTSSYQAEWILDGG 409
Query: 399 DEADSDSDNDADDGMVLDQEDRGFPGYEGTNNSDIDDDQASLNFRYADDGTENDSVMMEG 458
++ + D D M + ED + ++ + +++ ++ T +SV
Sbjct: 410 SQSGGEGDEYEYDDM--EHEDFMEEESQDESSEEEEEEYETM--------TIGESVH--- 456
Query: 459 EILTREQIEDE-----IKKIKEAHAEDEEFPDEVDTPLDVPARKRFAKYRGLKSFRTSSW 513
+ L ++I++E ++K K+ E E FPDEVDTP DV AR RF KYRGLKSFRTS W
Sbjct: 457 DDLYDKKIDEEAEAKMLEKYKQERLE-EMFPDEVDTPRDVAARIRFQKYRGLKSFRTSPW 515
Query: 514 DPKESLPPEYARIFAFDKFTRTQKHVFANALKMEQENMDDSVPASLYVRLHIKEVPAGIA 573
DPKE+LP +YARIF F FT T+K +F + E E + YV LH+ E ++
Sbjct: 516 DPKENLPQDYARIFQFQNFTNTRKSIFKEVEEKEVEGAE----VGCYVTLHVSE--VPVS 569
Query: 574 HRLCEMAERSPLIASGLLQHESKMSVLHFSVKKHDTYDAPIKAKEELIFHVGFRQFVARP 633
C + +PLIA LL HE KMSVL+ V++ P+KAKEELIFH GFR+F A P
Sbjct: 570 VVEC-FRQGTPLIAFSLLPHEQKMSVLNMVVRRDPGNTEPVKAKEELIFHCGFRRFRASP 628
Query: 634 IFSSDNMNSDKHKMERFLHAGCFSVASIYAPICFPPLPLIVLKSADGGVAPAVAAVGSLR 693
+FS + +DKHK++RFL A VA++YAPI FPP +++ K G+ ++ A G L
Sbjct: 629 LFSQ-HTAADKHKLQRFLTADMALVATVYAPITFPPASVLLFKQKSNGMH-SLIATGHLM 686
Query: 694 SIDPDRIILKKIVLTGYPQRVSKLKAIVRYMFHNPEDVRWFKPVEVWTKCGRRGRIKEPV 753
S+DPDR+++K++VL+G+P ++ A+VRYMF N EDV WFKPVE+ TK GRRG IKEP+
Sbjct: 687 SVDPDRMVIKRVVLSGHPLKMFTKMAVVRYMFFNREDVLWFKPVELRTKWGRRGHIKEPL 746
Query: 754 GTHGAMKCVFNGILQQRDTVCMSLYKRAYPKW 785
GTHG MKC FNG L+ +DTV M+LYKR +PKW
Sbjct: 747 GTHGHMKCSFNGKLKSQDTVLMNLYKRVFPKW 778
>sp|Q2NL82|TSR1_HUMAN Pre-rRNA-processing protein TSR1 homolog OS=Homo sapiens GN=TSR1
PE=1 SV=1
Length = 804
Score = 478 bits (1229), Expect = e-133, Method: Compositional matrix adjust.
Identities = 312/807 (38%), Positives = 443/807 (54%), Gaps = 60/807 (7%)
Query: 3 GSRVQVNKSHKSRFSTKSSRNLHKTAAK--DKSRIGKSDCNVAKGAKAARV---QRNKML 57
G Q NK+HK R+ + +A+ K R+ + + +RV R L
Sbjct: 7 GPLKQQNKAHKG------GRHRGRGSAQRDGKGRLALKTLSKKVRKELSRVDQRHRASQL 60
Query: 58 RDQKRLALLKEKRASSGIASPPRVIVLFGLSASVNLNSVREDLLRQLSSEGTGALSSTVS 117
R QK+ A+L EKR G PP +++ L + ++L + L Q GT L+ +
Sbjct: 61 RKQKKEAVLAEKRQLGGKDGPPHQVLVVPLHSRISLPEAMQ--LLQDRDTGTVHLNELGN 118
Query: 118 SSKYRL-------RTSVLQAPHGDLVGCMEMAKVADLVAFVASASSFSEESMSYYIDSFG 170
+ + L R A GDL ++MAKVAD + F+ DS G
Sbjct: 119 TQNFMLLCPRLKHRWFFTSARPGDLHVVLDMAKVADTILFLLDPLE--------GWDSTG 170
Query: 171 NQCLSVFRSLGLPSTAVLIRDLP-TDLKKRKDLKKMCISSLTSEFPEDCKFYAADTKDEL 229
+ CLS + GLP+ + ++ + LKK+ D +K ++ FP D K DT+ E
Sbjct: 171 DYCLSCLFAQGLPTYTLAVQGISGLPLKKQIDTRKKLSKAVEKRFPHD-KLLLLDTQQEA 229
Query: 230 HKFLWLFKEQRLTVPHWRNQRPFLMAQKVDVVADDCNSGKCTLLLHGYLRAHCLSVNQLV 289
L Q+ +R++R +L A VD V + N+ TL + GY+R L+VN+L+
Sbjct: 230 GMLLRQLANQKQQHLAFRDRRAYLFAHAVDFVPSEENNLVGTLKISGYVRGQTLNVNRLL 289
Query: 290 HISGAGDFQLGKIEILKDPFPLNAR-----KESD-AME---SDEIHDLE--VIRTLSPDP 338
HI G GDFQ+ +I+ DPFPLN R K+ D AME +D + D+E + + DP
Sbjct: 290 HIVGYGDFQMKQIDAPGDPFPLNPRGIKPQKDPDMAMEICATDAVDDMEEGLKVLMKADP 349
Query: 339 LKLEPLLVENVPDPLAGEQTWPTEAEMAEADQNQKHRKQKKRALPRGTSEYQAAWIVDDS 398
+ E L E +PDP+ GEQTWPTE E++EA K + + +P+GTS YQA WI+D
Sbjct: 350 GRQESLQAEVIPDPMEGEQTWPTEEELSEAKDFLKESSKVVKKVPKGTSSYQAEWILDGG 409
Query: 399 DEADSDSDNDADDGMVLDQEDRGFPGYEGTNNSDIDDDQASLNFRYADDGTENDSVMMEG 458
++ + D D M + ED + ++ + ++ + D + V E
Sbjct: 410 SQSGGEGDEYEYDDM--EHEDFMEEESQDESSEEEEEYETMTIGESVHDDLYDKKVDEEA 467
Query: 459 EILTREQIEDEIKKIKEAHAEDEEFPDEVDTPLDVPARKRFAKYRGLKSFRTSSWDPKES 518
E E+ + E +E FPDEVDTP DV AR RF KYRGLKSFRTS WDPKE+
Sbjct: 468 EAKMLEKYKQE--------RLEEMFPDEVDTPRDVAARIRFQKYRGLKSFRTSPWDPKEN 519
Query: 519 LPPEYARIFAFDKFTRTQKHVFANALKMEQENMDDSVPASLYVRLHIKEVPAGIAHRLCE 578
LP +YARIF F FT T+K +F + E E + YV LH+ E ++ C
Sbjct: 520 LPQDYARIFQFQNFTNTRKSIFKEVEEKEVEGAE----VGWYVTLHVSE--VPVSVVEC- 572
Query: 579 MAERSPLIASGLLQHESKMSVLHFSVKKHDTYDAPIKAKEELIFHVGFRQFVARPIFSSD 638
+ +PLIA LL HE KMSVL+ V++ P+KAKEELIFH GFR+F A P+FS
Sbjct: 573 FRQGTPLIAFSLLPHEQKMSVLNMVVRRDPGNTEPVKAKEELIFHCGFRRFRASPLFSQ- 631
Query: 639 NMNSDKHKMERFLHAGCFSVASIYAPICFPPLPLIVLKSADGGVAPAVAAVGSLRSIDPD 698
+ +DKHK++RFL A VA++YAPI FPP +++ K G+ ++ A G L S+DPD
Sbjct: 632 HTAADKHKLQRFLTADMALVATVYAPITFPPASVLLFKQKSNGMH-SLIATGHLMSVDPD 690
Query: 699 RIILKKIVLTGYPQRVSKLKAIVRYMFHNPEDVRWFKPVEVWTKCGRRGRIKEPVGTHGA 758
R+++K++VL+G+P ++ A+VRYMF N EDV WFKPVE+ TK GRRG IKEP+GTHG
Sbjct: 691 RMVIKRVVLSGHPFKIFTKMAVVRYMFFNREDVLWFKPVELRTKWGRRGHIKEPLGTHGH 750
Query: 759 MKCVFNGILQQRDTVCMSLYKRAYPKW 785
MKC F+G L+ +DTV M+LYKR +PKW
Sbjct: 751 MKCSFDGKLKSQDTVLMNLYKRVFPKW 777
>sp|Q9VP47|TSR1_DROME Pre-rRNA-processing protein TSR1 homolog OS=Drosophila melanogaster
GN=CG7338 PE=1 SV=1
Length = 814
Score = 413 bits (1062), Expect = e-114, Method: Compositional matrix adjust.
Identities = 274/803 (34%), Positives = 419/803 (52%), Gaps = 49/803 (6%)
Query: 3 GSRVQVNKSHKSRFSTKSSRNLHKTAAKDKSRIG-KSDCNVAKGAKAARVQRNKM--LRD 59
G Q NK+HK T R+ K +IG + + K + +RN+M LR
Sbjct: 10 GPLKQANKAHK----TGRHRSKGAIDNAQKGKIGLRPISHKHKQQQRKEQRRNQMNQLRK 65
Query: 60 QKRLALLKEKRASSGIASPPRVIVLFGLSASVNLNSVREDLLR---QLSSEGTGALSSTV 116
KR +L++KR G + P ++ L + ++ S E L +L E + + +
Sbjct: 66 NKREEVLEQKRKLGGQNTAPFLVCLLPMHEQIDPMSALEILKSCDSELVVENSPSGIVYI 125
Query: 117 SSSKYRLRTSVLQAP--HGDLVGCMEMAKVADLVAFVASASSFSEESMSYYIDSFGNQCL 174
+ +++ R + + P G+ + ++ KV D + +A+ F ++ + D +G +
Sbjct: 126 NLPRFKQRFAFVTPPVGRGNELIALDYLKVCDTTLLLTTAA-FGDDEI---FDRWGQRIF 181
Query: 175 SVFRSLGLPSTAVLIRDLPTDLKKRKDLKKMCISSLTSEFPEDCKFYAADTKDELHKFLW 234
++ + G+P+ V + DL + KR+ K + S+ + K DT E +
Sbjct: 182 NMMSAQGIPTPVVALMDLESINPKRRPAAKQAAQKVISKLLPEEKIMQLDTASEALNVMR 241
Query: 235 LFKEQRLTVPHWRNQRPFLMAQKVDVV-ADDCNSGKCTLLLHGYLRAHCLSVNQLVHISG 293
Q+ + H RP L V+ D + TL + G+LR L+VN LVHI G
Sbjct: 242 RIGGQKKRILHNVANRPHLFGDVVEFKPGSDPSDDLGTLEVTGFLRGQSLNVNGLVHIPG 301
Query: 294 AGDFQLGKIEILKDPFPLNARKESDAMESDEIHDLEVIRTLSPDPLKLEPLLVENVPDPL 353
GDFQL ++ DP+ L+ ++ E+ E+ L+ DP K L EN+PDP+
Sbjct: 302 LGDFQLSQVVAPPDPYKLDKSRDG---ENSEVRLLD-----RSDPSKRTSLQSENIPDPM 353
Query: 354 AGEQTWPTEAEMAEADQNQKHRKQKKRALPRGTSEYQAAWIVDDSD-EADSDSDNDADDG 412
EQTWPTE E+A + K K KR +P+G SEYQAAWI D + E D+D
Sbjct: 354 DAEQTWPTEDEIAASQAETKKMKLVKR-VPKGYSEYQAAWIPDVEEVEDPDGKDDDDMSE 412
Query: 413 MVLDQEDRGFPGYEGTNNSDIDDDQASLNFRYADDGTENDSVMMEGEILTREQIEDE--- 469
D ++ + +N +D+ R +D D+V + E ++ D+
Sbjct: 413 DDDDDKEDDNEDFMSCDNKSFEDEYEK---RDSDTEEFQDTVSVASEAAINDEKYDQQMD 469
Query: 470 -------IKKIKEAHAEDEEFPDEVDTPLDVPARKRFAKYRGLKSFRTSSWDPKESLPPE 522
+KK+++A D+ +PDE+DTPLDVPAR+RF KYRGL+SFRTS WD KE+LP +
Sbjct: 470 FQEERETLKKLQQART-DQLWPDEIDTPLDVPARERFQKYRGLESFRTSPWDAKENLPAD 528
Query: 523 YARIFAFDKFTRTQKHVFANALKMEQENMDDSVPASLYVRLHIKEVPAGIAHRLCEMAER 582
YARI+ F F RT++ + A + E V LYV L++ VP +
Sbjct: 529 YARIYQFQNFDRTKRRILNEAKEFE------GVLPGLYVTLYVINVPESRWNAFKSAQLM 582
Query: 583 SPLIASGLLQHESKMSVLHFSVKKHDTYDAPIKAKEELIFHVGFRQFVARPIFSSDNMNS 642
+I G+L HE +M V++ +++ + P+K+KE+LI G+R+FV PI+S + N
Sbjct: 583 DNIIVYGMLPHEHQMCVMNVVLQRMPDSEVPLKSKEQLIIQCGYRRFVVNPIYSQ-HTNG 641
Query: 643 DKHKMERFLHAGCFSVASIYAPICFPPLPLIVLKSADGGVAPAVAAVGSLRSIDPDRIIL 702
DKHK ER+ A+ YAPI FPP P++ K + A+ A G L S +PDRI+L
Sbjct: 642 DKHKFERYFRPYETVCATFYAPIQFPPAPVLAFK-VNPDSTLALVARGRLLSCNPDRIVL 700
Query: 703 KKIVLTGYPQRVSKLKAIVRYMFHNPEDVRWFKPVEVWTKCGRRGRIKEPVGTHGAMKCV 762
K++VL+G+P R+++ A +RYMF EDV +FKPV++ TKCGR G IKE +GTHG MKC
Sbjct: 701 KRVVLSGHPMRINRKSASIRYMFFYKEDVEYFKPVKLRTKCGRLGHIKESLGTHGHMKCY 760
Query: 763 FNGILQQRDTVCMSLYKRAYPKW 785
F+G L+ DT M LYKR +PKW
Sbjct: 761 FDGQLRSYDTAFMYLYKRVFPKW 783
>sp|Q19329|TSR1_CAEEL Pre-rRNA-processing protein TSR1 homolog OS=Caenorhabditis elegans
GN=tag-151 PE=3 SV=1
Length = 785
Score = 379 bits (973), Expect = e-104, Method: Compositional matrix adjust.
Identities = 256/780 (32%), Positives = 411/780 (52%), Gaps = 83/780 (10%)
Query: 18 TKSSRNLHKTAAKDKSRIGKSDCNVAKGAKAARVQRNKMLRDQKRLALLKEKRASSGIAS 77
T+S+ + H+T +KD AR + KM RDQK ++ +R S+ +
Sbjct: 44 TRSAHSTHRTISKD-----------------ARRNQLKMARDQKMADAMERRRTSN---A 83
Query: 78 PPRVIVLFGLSASVNLNSVREDLLRQLSSEGTGALSSTVSSS------KYRLRTSVLQAP 131
P V V+ S+ + + + +++L++ + +T S+ +++ R S L
Sbjct: 84 PCLVTVV-----SLGVGARPTEFIKKLATCDETIIQTTSPSTIDFAIPRFKSRVSFLTPD 138
Query: 132 HGDLVGCMEMAKVADLVAFVASASSFSEESMSYYIDSFGNQCLSVFRSLGLPSTAVLIRD 191
++ G ++ + +D++ F+ MS + + Q L++ ++ GLP+ ++
Sbjct: 139 KDNVDGVLDAIRASDVLCFLWP--------MSAELSEWDEQLLTIIKANGLPTIVSVVPG 190
Query: 192 LPT--DLKKRKDLKKMCISSLTSEFPEDCKFYAADTKDELHKFLWLFKEQRLTVPHWRNQ 249
L + + KK++D++K ++ + AD+ + + L + E + + +
Sbjct: 191 LGSIANHKKKEDVRKGIEFIISKWSMSNAGVMPADSVTDNLQLLRILNETKKKPLTLQAR 250
Query: 250 RPFLMAQKVDVVADDCNSGKCTLLLHGYLRAHCLSVNQLVHISGAGDFQLGKIEILKDPF 309
+++ + ++ D CTL+ GYLR + N LVH+ G GDFQ+ KIE DP
Sbjct: 251 HSYMLVENLE--CSDKTGETCTLVAQGYLRGPEWNANNLVHLPGFGDFQISKIESTVDPH 308
Query: 310 PLNARKESDAMESDEIHDLEVIRTLSPDPLKLEPLLVENVPDPLAGEQTWPTEAEMAEAD 369
PL A ++ + I S D K + E PD + GEQTWPT E+ EAD
Sbjct: 309 PLKAHNKTPEAQ---------IIAKSDD--KRQNTETEITPDSMDGEQTWPTREELEEAD 357
Query: 370 QNQKHRKQKKRALPRGTSEYQAAWIVDDSDEADSDSDNDADDGMVLDQEDRGFPGYEGTN 429
+ + R +P+GTS YQAAWI+DD D+ D + ++ D ++ + E +
Sbjct: 358 K-------ELRRVPKGTSSYQAAWILDDEDDEDEEDSDEDMDDSDNEEVEDDSEEEEPMD 410
Query: 430 NSDIDDDQASLNFRYADDGTENDSVMMEGEILTREQIEDEIKKIKEAHAEDEEFPDEVDT 489
+ + + + + DDG + D M E E +E+ E+ ++PDEVDT
Sbjct: 411 DLKSEAGETTASEMMFDDGIDEDINMAEVEKYRKER-------------ENAQWPDEVDT 457
Query: 490 PLDVPARKRFAKYRGLKSFRTSSWDPKESLPPEYARIFAFDKFTRTQKHVFA--NALKME 547
P+D+PAR F KYRGLKSFRTS+WDPKE+LP +YARIF F + T+K+V + ++
Sbjct: 458 PMDMPARIAFQKYRGLKSFRTSTWDPKENLPLDYARIFQFANYRNTKKNVMSKIGGNDVD 517
Query: 548 QENMDDSVPASLYVRLHIKEVPAGIAHRLCEMAERSPLIASGLLQHESKMSVLHFSVKKH 607
+++ D + + I+ VP + L + L+ LL HE KMSVL+ +KKH
Sbjct: 518 ADSVADKKFNGAFASVFIENVPVAV---LEAYKDAKNLVLFQLLPHEHKMSVLNMVLKKH 574
Query: 608 DTYDAPIKA--KEELIFHVGFRQFVARPIFSSDNMNSDKHKMERFLHAGCFSVASIYAPI 665
+ PI + ++ IF+VGFRQF A +FSS N DK K+ERF+ VA++YAPI
Sbjct: 575 PSCTIPITSDQNQKFIFYVGFRQFEANAVFSS-NTPGDKFKLERFMPTEKTFVATVYAPI 633
Query: 666 CFPPLPLIVLKSADGGVAPAVAAVGSLRSIDPDRIILKKIVLTGYPQRVSKLKAIVRYMF 725
F P ++ + D G VA GS+ +PDRI+LK+ VL G+P ++++ +VRYMF
Sbjct: 634 TFNPATVLCFRQDDKGRQELVA-TGSILDSNPDRIVLKRTVLAGHPYKINRRAVVVRYMF 692
Query: 726 HNPEDVRWFKPVEVWTKCGRRGRIKEPVGTHGAMKCVFNGILQQRDTVCMSLYKRAYPKW 785
N ED+ WFKPVE++T GRRG IKE VGTHG MKC F+ L +D+V ++LYKR +P W
Sbjct: 693 FNREDIEWFKPVELYTPSGRRGHIKEAVGTHGNMKCRFDQQLNAQDSVMLNLYKRVFPVW 752
>sp|Q61WR2|TSR1_CAEBR Pre-rRNA-processing protein TSR1 homolog OS=Caenorhabditis briggsae
GN=tag-151 PE=3 SV=1
Length = 788
Score = 361 bits (927), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 247/752 (32%), Positives = 397/752 (52%), Gaps = 63/752 (8%)
Query: 46 AKAARVQRNKMLRDQKRLALLKEKRASSGIASPPRVIVLFGLSASVNLNSVREDLLRQLS 105
+K AR + KM RD+K ++ +R S+ +P V +L S+ + + + L++L+
Sbjct: 55 SKDARRNQLKMARDRKMADAMERRRTSN---APCLVTIL-----SLGVGARPSEFLKKLA 106
Query: 106 SEGTGALSSTVSSS------KYRLRTSVLQAPHGDLVGCMEMAKVADLVAFVASASSFSE 159
+ + + S+ +++ R S L ++ ++ + +D++ F+
Sbjct: 107 TCDETIVQTHSPSTIDFAIPRFKSRISFLTPDKENVDSVLDAIRASDVLCFLWP------ 160
Query: 160 ESMSYYIDSFGNQCLSVFRSLGLPSTAVLIRDLP--TDLKKRKDLKKMCISSLTSEFPED 217
+S + + Q L++ ++ GLP+ ++ L + KK++D++K +++ +
Sbjct: 161 --LSAELSEWDEQLLTICKAAGLPTIVSVVPGLGGIQNHKKKEDVRKGIEFTISKWSMSN 218
Query: 218 CKFYAADTKDELHKFLWLFKEQRLTVPHWRNQRPFLMAQKVDVVADDCNSGKCTLLLHGY 277
AD+ + + L E + + + +++ + ++ +S K TL GY
Sbjct: 219 AGVMPADSVTDNLQLLRTLNETKKKPLTLQARHSYMLVENLEATESPEDSSKITLKAQGY 278
Query: 278 LRAHCLSVNQLVHISGAGDFQLGKIEILKDPFPLNARKESDAMESDEIHDLEVIRTLSPD 337
LR + N L+H+ G GDFQ+ KIE DP PL A EVI
Sbjct: 279 LRGPEWNANNLIHLPGFGDFQISKIETAADPHPLKTSPPKGA---------EVIAKADE- 328
Query: 338 PLKLEPLLVENVPDPLAGEQTWPTEAEMAEADQNQKHRKQKKRALPRGTSEYQAAWIVDD 397
K + L E D + GEQTWPT+ E+ EAD+ R +P+GTS YQAAWI+DD
Sbjct: 329 --KRQSLETEITLDAMDGEQTWPTQEELEEADKEM-------RRVPKGTSSYQAAWILDD 379
Query: 398 SDEADSDSDNDADDGMVLDQEDRGFPGYEGTNNSDIDDDQASLNFRYADDGTENDSVMME 457
S++ + + D D D + +D E D+ ++ G S MM
Sbjct: 380 SEDDEDEEDEDEDMDDEEEDKDLEEDDEEEDTPMDLK----------SEAGETTASEMMF 429
Query: 458 GEILTREQIEDEIKKIKEAHAEDEEFPDEVDTPLDVPARKRFAKYRGLKSFRTSSWDPKE 517
+ + + E++K ++ E+ ++PDEVDTP+D PAR RF KYRGLKSFRTS+WD KE
Sbjct: 430 HDEIDEDINLAEVEKYRKER-ENAQWPDEVDTPIDQPARIRFQKYRGLKSFRTSTWDAKE 488
Query: 518 SLPPEYARIFAFDKFTRTQKHVFANALKMEQENMD---DSVPASLYVRLHIKEVPAGIAH 574
+LP +YARIF F + T+K+V + + + D D ++ ++I+ VP +
Sbjct: 489 NLPVDYARIFQFANYKNTKKNVMSKIGGNDVDAGDAVIDKKFNGVFASVYIENVPVSV-- 546
Query: 575 RLCEMAERSPLIASGLLQHESKMSVLHFSVKKHDTYDAPIKAKEE-LIFHVGFRQFVARP 633
+ E L+ LL HE KMS+L+ +KKH + PI ++++ IF+VGFRQF A
Sbjct: 547 -MEAYKETKNLVLFQLLPHEQKMSILNMVLKKHPSCTVPIGSEDQKFIFYVGFRQFEAHA 605
Query: 634 IFSSDNMNSDKHKMERFLHAGCFSVASIYAPICFPPLPLIVLKSADGGVAPAVAAVGSLR 693
+ SS N DK K+ERF+ VA++YAPI F P ++ + D G VA GS+
Sbjct: 606 VLSS-NTPGDKFKLERFMPTEKTFVATVYAPITFNPATVLCFRQDDKGRQELVA-TGSVL 663
Query: 694 SIDPDRIILKKIVLTGYPQRVSKLKAIVRYMFHNPEDVRWFKPVEVWTKCGRRGRIKEPV 753
+PDRI+LK+ VL+G+P ++++ +VRYMF N ED+ WFKPVE++T GRRG IKE V
Sbjct: 664 DTNPDRIVLKRTVLSGHPYKINRRAVVVRYMFFNREDIDWFKPVELYTPSGRRGHIKEAV 723
Query: 754 GTHGAMKCVFNGILQQRDTVCMSLYKRAYPKW 785
GTHG MKC F+ L +D+V ++LYKR +P W
Sbjct: 724 GTHGHMKCRFDQQLNAQDSVMLNLYKRVFPVW 755
>sp|O13956|TSR1_SCHPO Ribosome biogenesis protein tsr1 homolog OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC23H4.15 PE=3 SV=1
Length = 783
Score = 310 bits (793), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 245/807 (30%), Positives = 402/807 (49%), Gaps = 70/807 (8%)
Query: 4 SRVQVNKSHKSRFSTKSSRNLHKTAAKDKSRIGKSDCNVAKGAKAARVQRNKMLRDQKRL 63
S + K KS+ ++KSS + R G + V KA R K ++ KR
Sbjct: 7 STFKAKKPFKSKHASKSSLKEKYKNEVEPHRSGPKNI-VHTSTKADRRNTAKQIQLNKRT 65
Query: 64 ALLKEKRASSGIASPPRVIVLFGLSASVNLNSVREDLLRQLSSEGT----GALSSTVSSS 119
+ R G P+VI + L +V+ +V +LLR + E + S + S++
Sbjct: 66 EVAMNNRIFGGKNGAPKVITIVPLCNNVDSWNVLTNLLRSIDPEASLPKFDKDSISYSTT 125
Query: 120 KYRLRTSVL-QAPHGDLVGCMEMAKVADLVAFVASASSFSEESMSYYIDSFGNQCLSVFR 178
R + ++L P + ++ KV+D V FV SA +D FG + +
Sbjct: 126 IDRFKQNLLFLLPKREFYSLIDACKVSDYVIFVLSAVQ--------EVDEFGELIVRTTQ 177
Query: 179 SLGLPSTAVLIRDLPT--DLKKRKDLKKMCISSLTSEFPEDCKFYAAD-TKDELHKFLWL 235
G+ S ++ DL LK R ++KK S + F + + +AAD ++D L+ L
Sbjct: 178 GQGISSVLSMVHDLSEVDSLKTRNEVKKSLQSFMNFFFSDQERVFAADVSQDALNVMRAL 237
Query: 236 FKEQRLTVPHWRNQRPFLMAQKVDVVADDCNSGKCTLLLHGYLRAHCLSVNQLVHISGAG 295
+ HWR+ R +L++Q++ + LL+ G +R L N+L+HI G G
Sbjct: 238 CTSHPRGI-HWRDSRSYLLSQEI-------SYSNGNLLVRGIVRGKGLDPNRLIHIQGFG 289
Query: 296 DFQLGKIEILKDPFPLNARKESDAMESDEIHDLE--VIRTLSPDPLK--LEPLLVENVPD 351
DF + +I + P + S + DE +L ++ SP + LE L
Sbjct: 290 DFAINRI--YEAP---QGIQNSRGISMDEDTNLTGGLVELCSPTQEQDSLESLGPIIDDM 344
Query: 352 PLAGEQTWPTEA-------EMAEADQNQKHRKQKKRALPRGTSEYQAAWIVDDSDEADSD 404
+ EA + D ++ KR +P+GTS YQA WI D+ +E+D
Sbjct: 345 DTDMDSEVGKEASRGVRLDDFYYFDDEEEPVAVAKR-VPKGTSTYQATWIPDEDEESDQY 403
Query: 405 SDNDADDGMVLDQEDRGFPGYEGTNNSDIDDDQASLNFRYADDGTENDSVMMEGEILTRE 464
SD + + ++ DQ+++ + D D+++ DD + ++
Sbjct: 404 SDVEDTEVIIEDQDNQEISNHVAEEKIDSDEEET------IDDA--KSEMFVDLSEEEEV 455
Query: 465 QIEDEIKKIKEAHAEDEEFPDEVDTPLDVPARKRFAKYRGLKSFRTSSWDPKE---SLPP 521
+ +E +K ++ E+ EFPDEV+ + AR+RF KYRGL+S TS WD E + P
Sbjct: 456 RQYEEYRKKQKELQEELEFPDEVELQPNELARERFKKYRGLRSLYTSQWDADEYDPNEPR 515
Query: 522 EYARIFAFDKFTRTQKHVFANALKMEQENMDDSVPA-SLYVRLHIKEVPAGIAHRLCEMA 580
E+ ++F F+ + R K+ F ++Q + ++ P ++YV L + VP I +
Sbjct: 516 EWRQLFKFENY-RNLKNKF-----LKQPFIGEAKPGKAVYVEL--RNVPIEIFEYYNK-- 565
Query: 581 ERSPLIASGLLQHESKMSVLHFSVKKHDTYDAPIKAKEELIFHVGFRQFVARPIFS---S 637
+ L+ LLQ+E+K++V F+ +H Y+ PI++KEEL+ +G R+F+ RP++S +
Sbjct: 566 PWNLLVLYSLLQYENKLTVSQFTAMQHSEYEEPIESKEELLLQIGPRRFMVRPLYSDPTA 625
Query: 638 DNMNSDKHKMERFLHAGCFSVASIYAPICFPPLPLIVLK-SADGGVAPAVAAVGSLRSID 696
+++ K R+L +AS+ +PI F +P+I+ K S+D + +AA GS + D
Sbjct: 626 SGASNNLQKYHRYLPPKQAVIASVISPIVFGNVPIIMFKKSSDNSLR--LAATGSYVNCD 683
Query: 697 PDRIILKKIVLTGYPQRVSKLKAIVRYMFHNPEDVRWFKPVEVWTKCGRRGRIKEPVGTH 756
+ +I K+ VLTG+P +V K +RYMF NPEDV WFKP++++TK GR G IKEP+GTH
Sbjct: 684 TNSVIAKRAVLTGHPFKVHKKLVTIRYMFFNPEDVIWFKPIQLFTKQGRTGYIKEPLGTH 743
Query: 757 GAMKCVFNGILQQRDTVCMSLYKRAYP 783
G K FNG + +DTV MSLYKR YP
Sbjct: 744 GYFKATFNGKITVQDTVAMSLYKRMYP 770
>sp|Q54YA7|TSR1_DICDI Pre-rRNA-processing protein TSR1 homolog OS=Dictyostelium
discoideum GN=tsr1 PE=3 SV=1
Length = 826
Score = 306 bits (783), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 146/315 (46%), Positives = 208/315 (66%), Gaps = 15/315 (4%)
Query: 474 KEAHAEDEEFPDEVDTPLDVPARKRFAKYRGLKSFRTSSWDPKESLPPEYARIFAFDKFT 533
K+ ++ +PDEVDTP +VP+R RF+K+RGLKSFR+S WD KE+LP +YA+IF F F
Sbjct: 513 KQLQQDEILYPDEVDTPGNVPSRIRFSKFRGLKSFRSSPWDVKENLPIDYAKIFQFHSFN 572
Query: 534 RTQKHVFANALKMEQENMDDSVPAS--LYVRLHIKEVPAGIAHRLCEMAERSPLIASGLL 591
++ + A + D+ PA +YVR+H+ P + R P +A GL
Sbjct: 573 QSMRASIA---------ILDNAPAKPDMYVRIHLVNGPKQLVERNTTAITTKPEVAVGLY 623
Query: 592 QHESKMSVLHFSVKKHDTYDAPIKAKEELIFHVGFRQFVARPIFSSDNMNSDKHKMERFL 651
++E+K+S+LHFSV+KH +Y+ +++KEE+ FH G+R+F PI+S + N DK K E+FL
Sbjct: 624 RYENKISLLHFSVEKHKSYEETVRSKEEVYFHFGWRKFSTSPIYSISSPNCDKQKFEKFL 683
Query: 652 HAGCFSVASIYAPICFPPLPLIVLKSADGGVAPAVAAVGSLRSIDPDRIILKKIVLTG-Y 710
++A+IY PI +PP PL++ D + A G L S++PDRII K+I+LTG
Sbjct: 684 LPARNTMATIYGPITYPPAPLLIFNGKDCN---ELVATGYLSSVNPDRIICKRIILTGVI 740
Query: 711 PQRVSKLKAIVRYMFHNPEDVRWFKPVEVWTKCGRRGRIKEPVGTHGAMKCVFNGILQQR 770
+ +SK V+ MF+ PED+ WFK VE++TK GR G IKEP+GTHG MKC F+G + Q+
Sbjct: 741 AKSISKKFVTVKDMFYYPEDINWFKKVELYTKMGRVGHIKEPLGTHGRMKCQFDGTMNQQ 800
Query: 771 DTVCMSLYKRAYPKW 785
DTVCM+LYKR YPKW
Sbjct: 801 DTVCMNLYKRVYPKW 815
>sp|Q07381|TSR1_YEAST Ribosome biogenesis protein TSR1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TSR1 PE=1 SV=1
Length = 788
Score = 275 bits (704), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 228/827 (27%), Positives = 368/827 (44%), Gaps = 113/827 (13%)
Query: 9 NKSHKSRFSTKSS-RNLHK-TAAKDKSRIGKSDCNVAKGAKAARVQRNKMLRDQKRLALL 66
+KS+KS+ ++K + + L+K K+ GK D V+K R + K LR Q+ L +
Sbjct: 14 HKSYKSKHASKGALKRLYKGKVEKEPVGTGKPDKQVSK---LQRKNKAKQLRAQRILDSI 70
Query: 67 KEKRASSGIASPPRVIVLFGLSASVNLNSVREDLLRQLSSEGTGALSS------TVSSSK 120
+ ++ G ++I + L ++ + LL+ EG V K
Sbjct: 71 ENRKLFEGKNGAAKIITIVPLVNDLDPLDILYKLLKCADDEGIMVQEVDSKRIFNVHIKK 130
Query: 121 YRLRTSVLQAPHGDLVGCMEMAKVADLVAFVASASSFSEESMSYYIDSFGNQCLSVFRSL 180
++ ++ + + ++ AKVAD V F S +E FG Q +
Sbjct: 131 FKSNLKIIIPDMTNFLNILDCAKVADFVVFGLSGVQEVDEE-------FGEQIIRALELQ 183
Query: 181 GLPSTAVLIRDLPTDLKKRK---DLKKMCISSLTSEFPEDCKFYAADTKDELHKFLWLFK 237
G+ S +I +L +K K D+K+ S FP + + Y + + L
Sbjct: 184 GIASYIGVISNLSAVHEKEKFQLDVKQSLESYFKHFFPSEERVYNLEKNSDALNVLRTLC 243
Query: 238 EQRLTVPHWRNQRPFLMAQKVDVVADDCNSGKCTLLLHGYLRAHCLSVNQLVHISGAGDF 297
++ +WR+ R +++A VD V +SG L++ G +R + N+LVHI GDF
Sbjct: 244 QRLPRSINWRDNRGYVVADFVDFVETSPDSG--DLVIEGTVRGIGFNANRLVHIPDFGDF 301
Query: 298 QLGKIEILKDPFPLNARKESDAMESDEIHDLEVIRTLSPDPLKLE-------------PL 344
QL KIE + S+ ++I+ + D L LE
Sbjct: 302 QLNKIEKI----------------SESSQKRKIIKEKATDSLSLELDLQTVFESNMNRDT 345
Query: 345 LVENVPDPLAGEQTWPTEAEMAEADQNQKHR------------KQKKRALPRGTSEYQAA 392
L E P+ G + W E E D R KK A+P+GTS+YQA
Sbjct: 346 LDEYAPE---GTEDWSDYDEDFEYDGLTTARYDDHGFLPGREQTSKKAAVPKGTSDYQAK 402
Query: 393 WIVDD----SDEADSDSDN-------DADDGMVLDQEDRGFPGYEGTNNSDIDDDQASLN 441
W +DD ++E +++ N + DD M+++Q++ G E DI+D
Sbjct: 403 WYLDDVIDANEEEEAEQTNGKDETMMEIDDEMMVEQDNEEVAGDE---EYDIED------ 453
Query: 442 FRYADDGTENDSVMMEGEILTREQIEDEIKKIKEAHAEDEEFPDEVDTPLDVPARKRFAK 501
N+ Q+ ++ ++ ED EFPDE++ A +R +
Sbjct: 454 ---------NEGFEELSPEEEERQL----REFRDMEKEDREFPDEIELEPSESAIERLKR 500
Query: 502 YRGLKSFRTSSWDPKE---SLPPEYARIFAFDKFTRTQKHVFANALKMEQENMDDSVPAS 558
YRGLK+ W E S P E+ R+ + T+ + Q D +
Sbjct: 501 YRGLKNLYNCDWQVDEKDPSSPAEWKRLLRIGNYKNTKNRIIKETKNEAQAIAGDRI--R 558
Query: 559 LYVRLHIKEVPAGIAHRLCEMAERSPLIASGLLQHESKMSVLHFSVKKHDTYDAPIKAKE 618
+++R P + ++ + ++ GLL HE K +V++FS+++ + YD P+ ++E
Sbjct: 559 MFIRF-----PKFLLEKIQD-PKQLLFAVYGLLLHEHKNAVVNFSLQRWEQYDKPVPSQE 612
Query: 619 ELIFHVGFRQFVARPIFS-SDNMNSDKHKMERFLHAGCFSVASIYAPICFPPLPLIVLK- 676
++ G R++ +P+FS N ++ HK ERFLH SVA+ AP+ F P I K
Sbjct: 613 PIVVQYGVRRYTIQPLFSQGSNSPNNVHKYERFLHPDTVSVATCIAPVDFTQSPAIFFKP 672
Query: 677 SADGGVAPAVAAVGSLRSIDPDRIILKKIVLTGYPQRVSKLKAIVRYMFHNPEDVRWFKP 736
S + G+ + D RI+ K+ +LTG+P R K VRYMF PEDV WFK
Sbjct: 673 SPTDAKNIELIGHGTFLNADHSRILAKRAILTGHPFRFHKTVVTVRYMFFRPEDVEWFKS 732
Query: 737 VEVWTKCGRRGRIKEPVGTHGAMKCVFNGILQQRDTVCMSLYKRAYP 783
+ ++TK GR G IKE +GTHG K F+G L +D V MSLYKR +P
Sbjct: 733 IPLFTKSGRSGFIKESLGTHGYFKATFDGKLSAQDVVAMSLYKRMWP 779
>sp|O94653|BMS1_SCHPO Ribosome biogenesis protein bms1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=bms1 PE=1 SV=2
Length = 1121
Score = 106 bits (264), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 147/323 (45%), Gaps = 36/323 (11%)
Query: 478 AEDEEFPDEVDTPLDVPARKRFAKYRGLKSFRTSSWDPKESLPPEYARIFAFDKFTRTQK 537
AE+EE DEVD + R + L+ DP++ D +T +K
Sbjct: 643 AENEESADEVDFQTEREENARKKEELRLRFEEEDRGDPEKK---------DVDWYTE-EK 692
Query: 538 HVFANALKMEQENMDDSVP----------ASLYVRLHIKEVPAGIAHRLCEMAERSPLIA 587
A L + +E +D P A YVR+ I +VP R P++
Sbjct: 693 EKIARQLVINREAFEDMDPESRAEIEGYRAGTYVRIVINDVPFEFVEHF---DSRYPVVV 749
Query: 588 SGLLQHESKMSVLHFSVKKHDTYDAPIKAKEELIFHVGFRQFVARPIFSSDNMNSDKHKM 647
GLL +E + ++ +K+H + +K + LIF +G+R+F + P++S + + +++M
Sbjct: 750 GGLLPNEQRYGLVQVRIKRHRWHKKILKTNDPLIFSMGWRRFQSIPVYSISDSRT-RNRM 808
Query: 648 ERFL--HAGCFSVASIYAPICFPPLPLIVLKSADGGVAPA----VAAVGSLRSIDPDRII 701
++ H CF + Y P P ++S A A +AA GS+ +ID I
Sbjct: 809 LKYTPEHMHCF--GTFYGPFVAPNSGFCAVQSVANSFAKAGSFRIAATGSVLNIDQSTDI 866
Query: 702 LKKIVLTGYPQRVSKLKAIVRYMFHNPEDVRWFKPVEVWTKCGRRGRIKEPVGT-HGAMK 760
+KK+ LTG P ++ K A ++ MF +P +V F+ + T G RG++K+ V HG +
Sbjct: 867 VKKLKLTGVPYKIFKNTAFIKKMFSSPLEVAKFEGANIRTVSGIRGQVKKAVDQEHGHFR 926
Query: 761 CVFNGILQQRDTVCMSLYKRAYP 783
F + D V + + YP
Sbjct: 927 ATFEDKILMSDIVFLRAW---YP 946
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 137/307 (44%), Gaps = 54/307 (17%)
Query: 38 SDCNVAKGAKA-ARVQRNKMLRDQKRLALLKEKRASSGIA------SPPRVIVLFGLSAS 90
SD + + KA A +M R R A + +K+ + +PP VIV
Sbjct: 25 SDGSASNNPKAFAVASAGRMARQAMRTADISQKKLHVPMVDRTPDEAPPPVIVAVMGPPG 84
Query: 91 VNLNSVREDLLRQLS----SEGTGALSSTVSSSKYRLRTSVLQAPHGDLVGCMEMAKVAD 146
+++ + L+R+ S S+ TG + TV + K R R + L+ P+ DL +++AK+AD
Sbjct: 85 TGKSTLIKSLVRRYSKYTISQITGPI--TVVAGKKR-RITFLECPN-DLSSMIDVAKIAD 140
Query: 147 LVAFVASAS-SFSEESMSYYIDSFGNQCLSVFRSLGLPSTAVLIRDLPTDLKKR----KD 201
LV + A+ F E+M + L++ G+P ++ L DL K+ ++
Sbjct: 141 LVLLLIDANFGFEMETMEF---------LNILAPHGMPRIMGVLTHL--DLFKKTSTLRE 189
Query: 202 LKKMCISSLTSEFPEDCK-FYAADTKD---------ELHKFLWLFKEQRLTVPHWRNQRP 251
KK +E + K FY + + L +F+ + K + L WRNQ P
Sbjct: 190 AKKRLKHRFWTELYQGAKLFYLSGVLNGRYPDREILNLSRFISVMKFRPL---RWRNQHP 246
Query: 252 FLMAQK-------VDVVADDCNSGKCTLLLHGYLRAHCLSVNQL-VHISGAGDFQLGKIE 303
+L+A + VD+ + K TL +GYL L + VHI G GDF +
Sbjct: 247 YLLADRMEDLTLPVDIEQNPKVGRKITL--YGYLHGTNLPKHDASVHIPGVGDFVTSDVS 304
Query: 304 ILKDPFP 310
L+DP P
Sbjct: 305 SLEDPCP 311
>sp|Q14692|BMS1_HUMAN Ribosome biogenesis protein BMS1 homolog OS=Homo sapiens GN=BMS1 PE=1
SV=1
Length = 1282
Score = 93.2 bits (230), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 116/236 (49%), Gaps = 25/236 (10%)
Query: 558 SLYVRLHIKEVPAGIAHRLCEMAER----SPLIASGLLQHESKMSVLHFSVKKHDTYDAP 613
+YVR+ I+ VP CE + P+I GL E + + +KKH Y
Sbjct: 883 GMYVRIEIENVP-------CEFVQNFDPHYPIILGGLGNSEGNVGYVQMRLKKHRWYKKI 935
Query: 614 IKAKEELIFHVGFRQFVARPIFSSDNMNSDKHKME---RFLHAGCFSVASIYAPICFPPL 670
+K+++ +IF VG+R+F P++ ++ N + ++ + +H G A+ + PI
Sbjct: 936 LKSRDPIIFSVGWRRFQTIPLYYIEDHNGRQRLLKYTPQHMHCG----AAFWGPITPQGT 991
Query: 671 PLIVLKSADGGVAP--AVAAVGSLRSIDPDRIILKKIVLTGYPQRVSKLKAIVRYMFHNP 728
+ ++S G+ P +AA G + +D I+KK+ LTG+P ++ K + ++ MF++
Sbjct: 992 GFLAIQSV-SGIMPDFRIAATGVVLDLDKSIKIVKKLKLTGFPYKIFKNTSFIKGMFNSA 1050
Query: 729 EDVRWFKPVEVWTKCGRRGRIKEPV-GTHGAMKCVFNGILQQRDTVCMSLYKRAYP 783
+V F+ + T G RG+IK+ + GA + F L D V M + YP
Sbjct: 1051 LEVAKFEGAVIRTVSGIRGQIKKALRAPEGAFRASFEDKLLMSDIVFMRTW---YP 1103
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 123/268 (45%), Gaps = 37/268 (13%)
Query: 78 PPRVIVLFG---LSASVNLNSVREDLLRQLSSEGTGALSSTVSSSKYRLRTSVLQAPHGD 134
PP V+V+ G + S + + + RQ +E G + T+ S K R R ++++ D
Sbjct: 81 PPIVVVVMGPPKVGKSTLIQCLIRNFTRQKLTEIRGPV--TIVSGKKR-RLTIIEC-GCD 136
Query: 135 LVGCMEMAKVADLVAFVASASSFSEESMSYYIDSFGNQCLSVFRSLGLPSTAVLIRDLPT 194
+ +++AKVADLV + AS + +++F + L++ + G P ++ L +
Sbjct: 137 INMMIDLAKVADLVLMLIDAS------FGFEMETF--EFLNICQVHGFPKIMGVLTHLDS 188
Query: 195 DLKKRKDLKK----MCISSLTSEFPEDCKFYAADT------KDELH---KFLWLFKEQRL 241
K K LKK + T +P FY + E+H +F+ + K + L
Sbjct: 189 -FKHNKQLKKTKKRLKHRFWTEVYPGAKLFYLSGMVHGEYQNQEIHNLGRFITVMKFRPL 247
Query: 242 TVPHWRNQRPFLMAQKVDVVA---DDCNSGKC--TLLLHGYLRAHCLSVNQLVHISGAGD 296
T W+ P+++A +++ + D + KC + L+GYLR L +H+ G GD
Sbjct: 248 T---WQTSHPYILADRMEDLTNPEDIRTNIKCDRKVSLYGYLRGAHLKNKSQIHMPGVGD 304
Query: 297 FQLGKIEILKDPFPLNARKESDAMESDE 324
F + I L DP L +++ + E
Sbjct: 305 FAVSDISFLPDPCALPEQQKKRCLNEKE 332
>sp|Q08965|BMS1_YEAST Ribosome biogenesis protein BMS1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=BMS1 PE=1 SV=1
Length = 1183
Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 115/241 (47%), Gaps = 11/241 (4%)
Query: 547 EQENMDDSVPASLYVRLHIKEVPAGIAHRLCEMAERSPLIASGLLQHESKMSVLHFSVKK 606
EQ + A YVR+ ++VP + P++ GLL E K ++ +++
Sbjct: 775 EQRQRIEGFKAGSYVRIVFEKVPMEFVKNFNP---KFPIVMGGLLPTEIKFGIVKARLRR 831
Query: 607 HDTYDAPIKAKEELIFHVGFRQFVARPIFSSDNMNSDKHKMERFLHAGCFSVASIYAPIC 666
H + +K + L+ +G+R+F PI+++ + + + +M ++ + A+ Y P+C
Sbjct: 832 HRWHKKILKTNDPLVLSLGWRRFQTLPIYTTTDSRT-RTRMLKYTPEHTYCNAAFYGPLC 890
Query: 667 FPPLPLI---VLKSADGGVAPAVAAVGSLRSIDPDRIILKKIVLTGYPQRVSKLKAIVRY 723
P P ++ ++D G +AA G + ID + I+KK+ L G+P ++ K A ++
Sbjct: 891 SPNTPFCGVQIVANSDTGNGFRIAATGIVEEIDVNIEIVKKLKLVGFPYKIFKNTAFIKD 950
Query: 724 MFHNPEDVRWFKPVEVWTKCGRRGRIKEPVGT-HGAMKCVFNGILQQRDTVCMSLYKRAY 782
MF + +V F+ ++ T G RG IK + G + F + D V + + Y
Sbjct: 951 MFSSAMEVARFEGAQIKTVSGIRGEIKRALSKPEGHYRAAFEDKILMSDIVILRSW---Y 1007
Query: 783 P 783
P
Sbjct: 1008 P 1008
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 140/326 (42%), Gaps = 41/326 (12%)
Query: 7 QVNKSH-KSRFSTKSSRNLHKTAAKDKSRIGKSDCNVAKGAKAARVQRNKMLRDQKRLAL 65
Q NK H K++ + + LH K+ VA K AR + ++++L +
Sbjct: 3 QSNKQHRKAKEKNTAKKKLHTQGHNAKA------FAVAAPGKMARTMQRSSDVNERKLHV 56
Query: 66 LKEKRASSGIASPPRVIVLFGLSASVNLNSVREDLLRQLSSEGTGALSS--TVSSSKYRL 123
R PP ++ + G + +R L+R+++ + TV S K+R
Sbjct: 57 PMVDRTPED-DPPPFIVAVVGPPGTGKTTLIR-SLVRRMTKSTLNDIQGPITVVSGKHR- 113
Query: 124 RTSVLQAPHGDLVGCMEMAKVADLVAFVASAS-SFSEESMSYYIDSFGNQCLSVFRSLGL 182
R + L+ P DL +++AK+ADLV + + F E+M + + Q + R LG+
Sbjct: 114 RLTFLECPADDLNAMIDIAKIADLVLLLIDGNFGFEMETMEFLNIA---QHHGMPRVLGV 170
Query: 183 PSTAVLIRDLPTDLKKRKDLKKMCISSLTSEFPEDCK-FYAADTKD---------ELHKF 232
+ L + T +K LK +E + K FY + + L +F
Sbjct: 171 ATHLDLFKSQSTLRASKKRLK----HRFWTEVYQGAKLFYLSGVINGRYPDREILNLSRF 226
Query: 233 LWLFKEQRLTVPHWRNQRPFLMAQKV------DVVADDCNSGKCTLLLHGYLRAHCL--S 284
+ + K + L WRN+ P+++A + +++ + ++GYL L +
Sbjct: 227 ISVMKFRPL---KWRNEHPYMLADRFTDLTHPELIETQGLQIDRKVAIYGYLHGTPLPSA 283
Query: 285 VNQLVHISGAGDFQLGKIEILKDPFP 310
VHI+G GDF + +IE L DP P
Sbjct: 284 PGTRVHIAGVGDFSVAQIEKLPDPCP 309
>sp|A8MV67|YO021_HUMAN Putative BMS1-like protein ENSP00000383088 OS=Homo sapiens PE=5
SV=1
Length = 101
Score = 49.3 bits (116), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 14/103 (13%)
Query: 559 LYVRLHIKEVPAGIAHRLCEMAE----RSPLIASGLLQHESKMSVLHFSVKKHDTYDAPI 614
+YVR+ I+ VP CE + P+I GL E + + +KKH Y +
Sbjct: 1 MYVRVEIENVP-------CEFVQNIDPHYPIILGGLGNSEGNVGYVQMRLKKHRWYKKIL 53
Query: 615 KAKEELIFHVGFRQFVARPIFSSDNMNSDKHKME---RFLHAG 654
K+++ +IF VG+R+F P++ ++ N + ++ + +H G
Sbjct: 54 KSRDPIIFSVGWRRFQTIPLYYIEDHNGRQRLLKYTPQHMHCG 96
>sp|A8MXU9|YO022_HUMAN Putative BMS1-like protein ENSP00000383048 OS=Homo sapiens PE=5
SV=1
Length = 101
Score = 48.9 bits (115), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 14/103 (13%)
Query: 559 LYVRLHIKEVPAGIAHRLCEMAE----RSPLIASGLLQHESKMSVLHFSVKKHDTYDAPI 614
+YVR+ I+ VP CE + P+I GL E + + +KKH Y +
Sbjct: 1 MYVRVEIENVP-------CEFVQNIDPHYPIILGGLGNSEGNVGYVEMHLKKHRWYKKIL 53
Query: 615 KAKEELIFHVGFRQFVARPIFSSDNMNSDKHKME---RFLHAG 654
K+++ +IF VG+R+F P++ ++ N + ++ + +H G
Sbjct: 54 KSRDPIIFSVGWRRFQTIPLYYIEDHNGRQRLLKYTPQHMHCG 96
>sp|A8MTN0|YI027_HUMAN Putative BMS1-like protein ENSP00000382360 OS=Homo sapiens PE=5
SV=1
Length = 101
Score = 43.9 bits (102), Expect = 0.005, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 11/75 (14%)
Query: 559 LYVRLHIKEVPAGIAHRLCEMAE----RSPLIASGLLQHESKMSVLHFSVKKHDTYDAPI 614
+YVR+ I+ VP CE + P+I GL E + + +KKH Y +
Sbjct: 1 MYVRVEIENVP-------CEFVQNFDPHYPIILGGLGNSEGNVGHVQMRLKKHRWYKKIL 53
Query: 615 KAKEELIFHVGFRQF 629
K+++ +IF VG+R+F
Sbjct: 54 KSQDPIIFSVGWRRF 68
>sp|A6X270|SYC_OCHA4 Cysteine--tRNA ligase OS=Ochrobactrum anthropi (strain ATCC 49188 /
DSM 6882 / NCTC 12168) GN=cysS PE=3 SV=1
Length = 505
Score = 35.4 bits (80), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 77/169 (45%), Gaps = 29/169 (17%)
Query: 207 ISSLTSEFPEDCKFYA---ADTKDELHKFLWLFKEQRLTVPHWRNQRPFLMAQKVDVVAD 263
+S L + + E + A A++ DELH++ L ++++ TVP + + + V+ ++D
Sbjct: 342 LSMLQTHYREPINWTAQRLAESADELHRWYGLLRDRKFTVP----ETLTAVGEVVEALSD 397
Query: 264 DCNSGKCTLLLHGYLRAHCLSVNQLVHISGAGDFQ--LGKIE---ILKDPFPLNARKESD 318
D NS L +A I+G G+ LG ++ ++ + P+ A+ E D
Sbjct: 398 DLNSWTAITALRKAFKAR--------DITGLGEGMALLGLLDPHFVMAEDIPVFAKAEVD 449
Query: 319 --AMESDEIHDLEVIRTLS-------PDPLKLEPLLVENVPDPLAGEQT 358
A+E+ L I + D L E + +++ DP GE+T
Sbjct: 450 HQAIEARIAERLRFINEKNWAEADRIRDELLQEGVQLKDGKDPATGERT 498
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 296,424,582
Number of Sequences: 539616
Number of extensions: 13094697
Number of successful extensions: 50760
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 254
Number of HSP's that attempted gapping in prelim test: 43506
Number of HSP's gapped (non-prelim): 5346
length of query: 795
length of database: 191,569,459
effective HSP length: 126
effective length of query: 669
effective length of database: 123,577,843
effective search space: 82673576967
effective search space used: 82673576967
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)