BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003797
(795 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3SNP|A Chain A, Crystal Structure Analysis Of Iron Regulatory Protein 1 In
Complex With Ferritin H Ire Rna
pdb|3SNP|B Chain B, Crystal Structure Analysis Of Iron Regulatory Protein 1 In
Complex With Ferritin H Ire Rna
pdb|3SN2|A Chain A, Crystal Structure Analysis Of Iron Regulatory Protein 1 In
Complex With Transferrin Receptor Ire B Rna
Length = 908
Score = 1001 bits (2587), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/794 (60%), Positives = 594/794 (74%), Gaps = 4/794 (0%)
Query: 1 MRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMELEFQRNKERFAFLKW 60
MRDA+ KLG D KINP+ PVDLVIDHS+QVD R ++++ N +LEF+RN+ERF FLKW
Sbjct: 119 MRDAVKKLGGDPEKINPICPVDLVIDHSIQVDFNRRADSLQKNQDLEFERNRERFEFLKW 178
Query: 61 GSSAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDXXXXXXX 120
GS AF NM ++PPGSGI+HQVNLEYL RVVF+ +G YPDS+VGTDSHTTMID
Sbjct: 179 GSKAFRNMRIIPPGSGIIHQVNLEYLARVVFDQDGYYYPDSLVGTDSHTTMIDGLGVLGW 238
Query: 121 XXXXXXXXXXMLGQPMSMVLPGVVGFKLSGKLHNGVTATDLVLTVTQMLRKHGVVGKFVE 180
MLGQP+SMVLP V+G++L GK H VT+TD+VLT+T+ LR+ GVVGKFVE
Sbjct: 239 GVGGIEAEAVMLGQPISMVLPQVIGYRLMGKPHPLVTSTDIVLTITKHLRQVGVVGKFVE 298
Query: 181 FHGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAMVEGYLRA 240
F G G+ +LS+ADRATIANM PEYGAT FFPVD V+++YL TGR + V + YL+A
Sbjct: 299 FFGPGVAQLSIADRATIANMCPEYGATATFFPVDEVSIKYLVQTGRDESKVKQIRKYLQA 358
Query: 241 NKMFVDYNEPQQERVYSSYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGF 300
MF DY++P Q+ ++ +EL+L V PC SGPKRP D+V + +MK D+ SCL K GF
Sbjct: 359 VGMFRDYSDPSQDPDFTQVVELDLKTVVPCCSGPKRPQDKVAVSDMKKDFESCLGAKQGF 418
Query: 301 KGFAVPKETQEKVVKFSFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACEL 360
KGF V + F ++ L HGSVVIAAITS TNTSNPSVMLGAGL+AKKA +
Sbjct: 419 KGFQVAPDHHNDHKTFIYNDSEFTLSHGSVVIAAITSSTNTSNPSVMLGAGLLAKKAVDA 478
Query: 361 GLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDESVAS 420
GL VKP+VKTSL+PGSGVVT YL +SG+ YL++ GF +VGYG TCIGNSG L E V
Sbjct: 479 GLNVKPYVKTSLSPGSGVVTYYLRESGVMPYLSQLGFDVVGYGSMTCIGNSGPLPEPVVE 538
Query: 421 TITDNDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTK 480
IT D+VA VLSGNRNFEGRVHP TRANYLASPPLV+AYA+AGT+ IDF+KEP+GT
Sbjct: 539 AITQGDLVAVGVLSGNRNFEGRVHPNTRANYLASPPLVIAYAIAGTIRIDFEKEPLGTNA 598
Query: 481 DGKSVYFKDIWPTTEEIAEVVQSSVLPDMFKSTYEAITKGNPTWNQLSVPASKLYSWDPN 540
G+ V+ +DIWPT EEI V + V+P MF Y+ I N +WN L+ P+ KLY W+P
Sbjct: 599 KGQQVFLRDIWPTREEIQAVERQYVIPGMFTEVYQKIETVNASWNALAAPSDKLYLWNPK 658
Query: 541 STYIHEPPYFKDMTMDPPGAHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPTAKYLLER 600
STYI PP+F+++T+D + DAY LLN GDS+TTDHISPAG+I ++SP A+YL R
Sbjct: 659 STYIKSPPFFENLTLDLQPPKSIVDAYVLLNLGDSVTTDHISPAGNIARNSPAARYLTNR 718
Query: 601 GVERRDFNSYGSRRGNDEVMARGTFANIRLVNKLLNGEVGPKTVHVPTGEKLSVFDAAMK 660
G+ R+FNSYGSRRGND +MARGTFANIRL+N+ LN + P+T+H+P+GE L VFDAA +
Sbjct: 719 GLTPREFNSYGSRRGNDAIMARGTFANIRLLNRFLNKQ-APQTIHLPSGETLDVFDAAER 777
Query: 661 YKSAGHGTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCF 720
Y+ GH I+LAG EYGSGSSRDWAAKGP LLG+KAV+A+S+ERIHRSNLVGMG+IPL +
Sbjct: 778 YQQEGHPLIVLAGKEYGSGSSRDWAAKGPFLLGIKAVLAESYERIHRSNLVGMGVIPLEY 837
Query: 721 KAGEDADSLGLTGHERFSIDLPSKISEIRPGQDVTVTTDSGKSFTCTVRFDTEVELAYFD 780
GE+ADSLGLTG ER++I +P ++ P V V D+GK+F +RFDT+VEL YF
Sbjct: 838 LPGENADSLGLTGRERYTIIIPENLT---PRMHVQVKLDTGKTFQAVIRFDTDVELTYFH 894
Query: 781 HGGILPFVIRNLIK 794
+GGIL ++IR + K
Sbjct: 895 NGGILNYMIRKMAK 908
>pdb|2B3X|A Chain A, Structure Of An Orthorhombic Crystal Form Of Human
Cytosolic Aconitase (Irp1)
pdb|2B3Y|A Chain A, Structure Of A Monoclinic Crystal Form Of Human Cytosolic
Aconitase (Irp1)
pdb|2B3Y|B Chain B, Structure Of A Monoclinic Crystal Form Of Human Cytosolic
Aconitase (Irp1)
Length = 888
Score = 995 bits (2573), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/794 (59%), Positives = 594/794 (74%), Gaps = 4/794 (0%)
Query: 1 MRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMELEFQRNKERFAFLKW 60
MRDA+ KLG D KINP+ P DLVIDHS+QVD R ++++ N +LEF+RN+ERF FLKW
Sbjct: 99 MRDAVKKLGGDPEKINPVCPADLVIDHSIQVDFNRRADSLQKNQDLEFERNRERFEFLKW 158
Query: 61 GSSAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDXXXXXXX 120
GS AFHNM ++PPGSGI+HQVNLEYL RVVF+ +G YPDS+VGTDSHTTMID
Sbjct: 159 GSQAFHNMRIIPPGSGIIHQVNLEYLARVVFDQDGYYYPDSLVGTDSHTTMIDGLGILGW 218
Query: 121 XXXXXXXXXXMLGQPMSMVLPGVVGFKLSGKLHNGVTATDLVLTVTQMLRKHGVVGKFVE 180
MLGQP+SMVLP V+G++L GK H VT+TD+VLT+T+ LR+ GVVGKFVE
Sbjct: 219 GVGGIEAEAVMLGQPISMVLPQVIGYRLMGKPHPLVTSTDIVLTITKHLRQVGVVGKFVE 278
Query: 181 FHGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAMVEGYLRA 240
F G G+ +LS+ADRATIANM PEYGAT FFPVD V++ YL TGR +E + ++ YL+A
Sbjct: 279 FFGPGVAQLSIADRATIANMCPEYGATAAFFPVDEVSITYLVQTGRDEEKLKYIKKYLQA 338
Query: 241 NKMFVDYNEPQQERVYSSYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGF 300
MF D+N+P Q+ ++ +EL+L V PC SGPKRP D+V + +MK D+ SCL K GF
Sbjct: 339 VGMFRDFNDPSQDPDFTQVVELDLKTVVPCCSGPKRPQDKVAVSDMKKDFESCLGAKQGF 398
Query: 301 KGFAVPKETQEKVVKFSFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACEL 360
KGF V E F + L HGSVVIAAITSCTNTSNPSVMLGAGL+AKKA +
Sbjct: 399 KGFQVAPEHHNDHKTFIYDNTEFTLAHGSVVIAAITSCTNTSNPSVMLGAGLLAKKAVDA 458
Query: 361 GLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDESVAS 420
GL V P++KTSL+PGSGVVT YL +SG+ YL++ GF +VGYGC TCIGNSG L E V
Sbjct: 459 GLNVMPYIKTSLSPGSGVVTYYLQESGVMPYLSQLGFDVVGYGCMTCIGNSGPLPEPVVE 518
Query: 421 TITDNDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTK 480
IT D+VA VLSGNRNFEGRVHP TRANYLASPPLV+AYA+AGT+ IDF+KEP+G
Sbjct: 519 AITQGDLVAVGVLSGNRNFEGRVHPNTRANYLASPPLVIAYAIAGTIRIDFEKEPLGVNA 578
Query: 481 DGKSVYFKDIWPTTEEIAEVVQSSVLPDMFKSTYEAITKGNPTWNQLSVPASKLYSWDPN 540
G+ V+ KDIWPT +EI V + V+P MFK Y+ I N +WN L+ P+ KL+ W+
Sbjct: 579 KGQQVFLKDIWPTRDEIQAVERQYVIPGMFKEVYQKIETVNESWNALATPSDKLFFWNSK 638
Query: 541 STYIHEPPYFKDMTMDPPGAHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPTAKYLLER 600
STYI PP+F+++T+D + DAY LLN GDS+TTDHISPAG+I ++SP A+YL R
Sbjct: 639 STYIKSPPFFENLTLDLQPPKSIVDAYVLLNLGDSVTTDHISPAGNIARNSPAARYLTNR 698
Query: 601 GVERRDFNSYGSRRGNDEVMARGTFANIRLVNKLLNGEVGPKTVHVPTGEKLSVFDAAMK 660
G+ R+FNSYGSRRGND VMARGTFANIRL+N+ LN + P+T+H+P+GE L VFDAA +
Sbjct: 699 GLTPREFNSYGSRRGNDAVMARGTFANIRLLNRFLNKQ-APQTIHLPSGEILDVFDAAER 757
Query: 661 YKSAGHGTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCF 720
Y+ AG I+LAG EYG+GSSRDWAAKGP LLG+KAV+A+S+ERIHRSNLVGMG+IPL +
Sbjct: 758 YQQAGLPLIVLAGKEYGAGSSRDWAAKGPFLLGIKAVLAESYERIHRSNLVGMGVIPLEY 817
Query: 721 KAGEDADSLGLTGHERFSIDLPSKISEIRPGQDVTVTTDSGKSFTCTVRFDTEVELAYFD 780
GE+AD+LGLTG ER++I +P ++P V V D+GK+F +RFDT+VEL YF
Sbjct: 818 LPGENADALGLTGQERYTIIIPEN---LKPQMKVQVKLDTGKTFQAVMRFDTDVELTYFL 874
Query: 781 HGGILPFVIRNLIK 794
+GGIL ++IR + K
Sbjct: 875 NGGILNYMIRKMAK 888
>pdb|1ACO|A Chain A, Crystal Structure Of Aconitase With Transaconitate Bound
pdb|1FGH|A Chain A, Complex With 4-Hydroxy-Trans-Aconitate
pdb|8ACN|A Chain A, Crystal Structures Of Aconitase With Isocitrate And
Nitroisocitrate Bound
Length = 754
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 216/782 (27%), Positives = 327/782 (41%), Gaps = 144/782 (18%)
Query: 19 VPVDLVIDHSVQVDVTRSENAVKANMELEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIV 78
VP + DH ++ + ++ +A N+E + FL + A + + PGSGI+
Sbjct: 93 VPSTIHCDHLIEAQLGGEKDLRRAK-----DINQEVYNFLA-TAGAKYGVGFWRPGSGII 146
Query: 79 HQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDXXXXXXXXXXXXXXXXXMLGQPMSM 138
HQ+ LE + G+L ++GTDSHT M G P +
Sbjct: 147 HQIILEN-----YAYPGVL----LIGTDSHTPNGGGLGGICIGVGGADAVDVMAGIPWEL 197
Query: 139 VLPGVVGFKLSGKLHNGVTATDLVLTVTQMLRKHGVVGKFVEFHGDGMGELSLADRATIA 198
P V+G KL+G L + D++L V +L G G VE+HG G+ +S ATI
Sbjct: 198 KCPKVIGVKLTGSLSGWTSPKDVILKVAGILTVKGGTGAIVEYHGPGVDSISCTGMATIC 257
Query: 199 NMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAMVEGYLRANKMFVDYNEPQQERVYSS 258
NM E GAT FP +H +YL TGR+D E F D+ P Y
Sbjct: 258 NMGAEIGATTSVFPYNHRMKKYLSKTGRADIANLADE--------FKDHLVPDSGCHYDQ 309
Query: 259 YLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKETQEKVVKFSF 318
+E+NL++++P I+GP P P+ E+ G KE
Sbjct: 310 LIEINLSELKPHINGPFTPDLAHPVAEV---------------GSVAEKE---------- 344
Query: 319 HGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGV 378
G P +++ + I SCTN+S + A VAK+A GL+ K + ++ PGS
Sbjct: 345 -GWPLDIR-----VGLIGSCTNSSYEDMGRSAA-VAKQALAHGLKCKS--QFTITPGSEQ 395
Query: 379 VTKYLLQSGLQKYLNEQGFHIVGYGCTTCIG--NSGDLDESVASTITDNDIVAAAVLSGN 436
+ + + G + L + G ++ C CIG + D+ + +TI V S N
Sbjct: 396 IRATIERDGYAQVLRDVGGIVLANACGPCIGQWDRKDIKKGEKNTI---------VTSYN 446
Query: 437 RNFEGR--VHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTKDGKSVYFKDIWPTT 494
RNF GR +P T A ++ SP +V A A+AGT+ + + + + T KDGK FK P
Sbjct: 447 RNFTGRNDANPETHA-FVTSPEIVTALAIAGTLKFNPETDFL-TGKDGKK--FKLEAPDA 502
Query: 495 EEI--AEVVQSSVLPDMFKSTYEAITKGNPTWNQLSVPASKLYSWDPNSTYIHEPPYFKD 552
+E+ AE D + TY+ K + P S+ + EP
Sbjct: 503 DELPRAEF-------DPGQDTYQHPPKDSSGQRVDVSPTSQRLQ-------LLEP----- 543
Query: 553 MTMDPPGAHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPTAKYLLERGVERRDFNSYGS 612
D ++D L+ TTDHIS AG P K+
Sbjct: 544 --FDKWDGKDLEDLQILIKVKGKCTTDHISAAG------PWLKF---------------- 579
Query: 613 RRGNDEVMARGTFANIRLVNKLLNGEVGPKT------VHVPTGEKLSVFDAAMKYKSAGH 666
RG NI N LL G + + + T E V D A YK G
Sbjct: 580 ---------RGHLDNIS--NNLLIGAINSENRKANSVRNAVTQEFGPVPDTARYYKQHGI 628
Query: 667 GTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGEDA 726
+++ YG GSSR+ +A P LG +A+I KSF RIH +NL G++PL F + A
Sbjct: 629 RWVVIGDENYGEGSSREHSALEPRFLGGRAIITKSFARIHETNLKKQGLLPLTF--ADPA 686
Query: 727 DSLGLTGHERFSIDLPSKISEIRPGQDVTVTTDSGKSFTCTVRFD---TEVELAYFDHGG 783
D + ++ +I + + PG+ +T T+ + E ++ +F G
Sbjct: 687 DYNKIHPVDKLTI---QGLKDFAPGKPLTCIIKHPNGTQETILLNHTFNETQIEWFRAGS 743
Query: 784 IL 785
L
Sbjct: 744 AL 745
>pdb|1AMI|A Chain A, Steric And Conformational Features Of The Aconitase
Mechanism
pdb|1AMJ|A Chain A, Steric And Conformational Features Of The Aconitase
Mechanism
Length = 754
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 216/782 (27%), Positives = 327/782 (41%), Gaps = 144/782 (18%)
Query: 19 VPVDLVIDHSVQVDVTRSENAVKANMELEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIV 78
VP + DH ++ + ++ +A N+E + FL + A + + PGSGI+
Sbjct: 93 VPSTIHCDHLIEAQLGGEKDLRRAK-----DINQEVYNFLA-TAGAKYGVGFWRPGSGII 146
Query: 79 HQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDXXXXXXXXXXXXXXXXXMLGQPMSM 138
HQ+ LE + G+L ++GTDSHT M G P +
Sbjct: 147 HQIILEN-----YAYPGVL----LIGTDSHTPNGGGLGGICIGVGGADAVDVMAGIPWEL 197
Query: 139 VLPGVVGFKLSGKLHNGVTATDLVLTVTQMLRKHGVVGKFVEFHGDGMGELSLADRATIA 198
P V+G KL+G L + D++L V +L G G VE+HG G+ +S ATI
Sbjct: 198 KCPKVIGVKLTGSLSGWTSPKDVILKVAGILTVKGGTGAIVEYHGPGVDSISCTGMATIC 257
Query: 199 NMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAMVEGYLRANKMFVDYNEPQQERVYSS 258
NM E GAT FP +H +YL TGR+D E F D+ P Y
Sbjct: 258 NMGAEIGATTSVFPYNHRMKKYLSKTGRADIANLADE--------FKDHLVPDSGCHYDQ 309
Query: 259 YLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKETQEKVVKFSF 318
+E+NL++++P I+GP P P+ E+ G KE
Sbjct: 310 LIEINLSELKPHINGPFTPDLAHPVAEV---------------GSVAEKE---------- 344
Query: 319 HGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGV 378
G P +++ + I SCTN+S + A VAK+A GL+ K + ++ PGS
Sbjct: 345 -GWPLDIR-----VGLIGSCTNSSYEDMGRSAA-VAKQALAHGLKCKS--QFTITPGSEQ 395
Query: 379 VTKYLLQSGLQKYLNEQGFHIVGYGCTTCIG--NSGDLDESVASTITDNDIVAAAVLSGN 436
+ + + G + L + G ++ C CIG + D+ + +TI V S N
Sbjct: 396 IRATIERDGYAQVLRDVGGIVLANACGPCIGQWDRKDIKKGEKNTI---------VTSYN 446
Query: 437 RNFEGR--VHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTKDGKSVYFKDIWPTT 494
RNF GR +P T A ++ SP +V A A+AGT+ + + + + T KDGK FK P
Sbjct: 447 RNFTGRNDANPETHA-FVTSPEIVTALAIAGTLKFNPETDFL-TGKDGKK--FKLEAPDA 502
Query: 495 EEI--AEVVQSSVLPDMFKSTYEAITKGNPTWNQLSVPASKLYSWDPNSTYIHEPPYFKD 552
+E+ AE D + TY+ K + P S+ + EP
Sbjct: 503 DELPRAEF-------DPGQDTYQHPPKDSSGQRVDVSPTSQRLQ-------LLEP----- 543
Query: 553 MTMDPPGAHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPTAKYLLERGVERRDFNSYGS 612
D ++D L+ TTDHIS AG P K+
Sbjct: 544 --FDKWDGKDLEDLQILIKVKGKCTTDHISAAG------PWLKF---------------- 579
Query: 613 RRGNDEVMARGTFANIRLVNKLLNGEVGPKT------VHVPTGEKLSVFDAAMKYKSAGH 666
RG NI N LL G + + + T E V D A YK G
Sbjct: 580 ---------RGHLDNIS--NNLLIGAINSENRKANSVRNAVTQEFGPVPDTARYYKQHGI 628
Query: 667 GTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGEDA 726
+++ YG GSSR+ +A P LG +A+I KSF RIH +NL G++PL F + A
Sbjct: 629 RWVVIGDENYGEGSSREHSALEPRFLGGRAIITKSFARIHETNLKKQGLLPLTF--ADPA 686
Query: 727 DSLGLTGHERFSIDLPSKISEIRPGQDVTVTTDSGKSFTCTVRFD---TEVELAYFDHGG 783
D + ++ +I + + PG+ +T T+ + E ++ +F G
Sbjct: 687 DYNKIHPVDKLTI---QGLKDFAPGKPLTCIIKHPNGTQETILLNHTFNETQIEWFRAGS 743
Query: 784 IL 785
L
Sbjct: 744 AL 745
>pdb|5ACN|A Chain A, Structure Of Activated Aconitase. Formation Of The
(4fe-4s) Cluster In The Crystal
pdb|6ACN|A Chain A, Structure Of Activated Aconitase. Formation Of The
(4fe-4s) Cluster In The Crystal
pdb|7ACN|A Chain A, Crystal Structures Of Aconitase With Isocitrate And
Nitroisocitrate Bound
Length = 754
Score = 197 bits (500), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 211/744 (28%), Positives = 312/744 (41%), Gaps = 142/744 (19%)
Query: 19 VPVDLVIDHSVQVDVTRSENAVKANMELEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIV 78
VP + DH ++ + ++ +A N+E + FL + A + + PGSGI+
Sbjct: 93 VPSTIHCDHLIEAQLGGEKDLRRAK-----DINQEVYNFLA-TAGAKYGVGFWRPGSGII 146
Query: 79 HQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDXXXXXXXXXXXXXXXXXMLGQPMSM 138
HQ+ LE + G+L ++GTDSHT M G P +
Sbjct: 147 HQIILEN-----YAYPGVL----LIGTDSHTPNGGGLGGICIGVGGADAVDVMAGIPWEL 197
Query: 139 VLPGVVGFKLSGKLHNGVTATDLVLTVTQMLRKHGVVGKFVEFHGDGMGELSLADRATIA 198
P V+G KL+G L + D++L V +L G G VE+HG G+ +S ATI
Sbjct: 198 KCPKVIGVKLTGSLSGWTSPKDVILKVAGILTVKGGTGAIVEYHGPGVDSISCTGMATIC 257
Query: 199 NMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAMVEGYLRANKMFVDYNEPQQERVYSS 258
NM E GAT FP +H +YL TGR+D E F D+ P Y
Sbjct: 258 NMGAEIGATTSVFPYNHRMKKYLSKTGRADIANLADE--------FKDHLVPDPGCHYDQ 309
Query: 259 YLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKETQEKVVKFSF 318
+E+NL++++P I+GP P P+ E+ G KE
Sbjct: 310 VIEINLSELKPHINGPFTPDLAHPVAEV---------------GSVAEKE---------- 344
Query: 319 HGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGV 378
G P +++ + I SCTN+S + A VAK+A GL+ K + ++ PGS
Sbjct: 345 -GWPLDIR-----VGLIGSCTNSSYEDMGRSAA-VAKQALAHGLKCKS--QFTITPGSEQ 395
Query: 379 VTKYLLQSGLQKYLNEQGFHIVGYGCTTCIG--NSGDLDESVASTITDNDIVAAAVLSGN 436
+ + + G + L + G ++ C CIG + D+ + +TI V S N
Sbjct: 396 IRATIERDGYAQVLRDVGGIVLANACGPCIGQWDRKDIKKGEKNTI---------VTSYN 446
Query: 437 RNFEGR--VHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTKDGKSVYFKDIWPTT 494
RNF GR +P T A ++ SP +V A A+AGT+ + + + + T KDGK FK P
Sbjct: 447 RNFTGRNDANPETHA-FVTSPEIVTALAIAGTLKFNPETDFL-TGKDGKK--FKLEAPDA 502
Query: 495 EEI--AEVVQSSVLPDMFKSTYEAITKGNPTWNQLSVPASKLYSWDPNSTYIHEPPYFKD 552
+E+ AE D + TY+ K + P S+ + EP
Sbjct: 503 DELPRAEF-------DPGQDTYQHPPKDSSGQRVDVSPTSQRLQ-------LLEP----- 543
Query: 553 MTMDPPGAHGVKDAYCLLNFGDSITTDHISPAGSI-----HKDSPTAKYLLER-GVERRD 606
D ++D L+ TTDHIS AG H D+ + L+ +E R
Sbjct: 544 --FDKWDGKDLEDLQILIKVKGKCTTDHISAAGPWLKFRGHLDNISNNLLIGAINIENRK 601
Query: 607 FNSYGSRRGNDEVMARGTFANIRLVNKLLNGEVGPKTVHVPTGEKLSVFDAAMKYKSAGH 666
NS V + E GP V D A YK G
Sbjct: 602 ANS---------------------VRNAVTQEFGP------------VPDTARYYKQHGI 628
Query: 667 GTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGED- 725
+++ YG GSSR+ +A P LG +A+I KSF RIH +NL G++PL F D
Sbjct: 629 RWVVIGDENYGEGSSREHSALEPRHLGGRAIITKSFARIHETNLKKQGLLPLTFADPADY 688
Query: 726 -----ADSLGLTGHERFSIDLPSK 744
D L + G + F+ P K
Sbjct: 689 NKIHPVDKLTIQGLKDFAPGKPLK 712
>pdb|1NIS|A Chain A, Crystal Structure Of Aconitase With Trans-Aconitate And
Nitrocitrate Bound
pdb|1NIT|A Chain A, Crystal Structure Of Aconitase With Trans-Aconitate And
Nitrocitrate Bound
Length = 754
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 216/782 (27%), Positives = 326/782 (41%), Gaps = 144/782 (18%)
Query: 19 VPVDLVIDHSVQVDVTRSENAVKANMELEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIV 78
VP + DH ++ + ++ +A N+E + FL + A + + PGSGI+
Sbjct: 93 VPSTIHCDHLIEAQLGGEKDLRRAK-----DINQEVYNFLA-TAGAKYGVGFWRPGSGII 146
Query: 79 HQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDXXXXXXXXXXXXXXXXXMLGQPMSM 138
HQ+ LE + G+L ++GTDSHT M G P +
Sbjct: 147 HQIILEN-----YAYPGVL----LIGTDSHTPNGGGLGGICIGVGGADAVDVMAGIPWEL 197
Query: 139 VLPGVVGFKLSGKLHNGVTATDLVLTVTQMLRKHGVVGKFVEFHGDGMGELSLADRATIA 198
P V+G KL+G L + D++L V +L G G VE+HG G+ +S ATI
Sbjct: 198 KCPKVIGVKLTGSLSGWTSPKDVILKVAGILTVKGGTGAIVEYHGPGVDSISCTGMATIC 257
Query: 199 NMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAMVEGYLRANKMFVDYNEPQQERVYSS 258
NM E GAT FP +H +YL TGR+D E F D+ P Y
Sbjct: 258 NMGAEIGATTSVFPYNHRMKKYLSKTGRADIANLADE--------FKDHLVPDSGCHYDQ 309
Query: 259 YLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKETQEKVVKFSF 318
+E+NL++++P I+GP P P+ E+ G KE
Sbjct: 310 LIEINLSELKPHINGPFTPDLAHPVAEV---------------GSVAEKE---------- 344
Query: 319 HGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGV 378
G P +++ + I SCTN+S + A VAK+A GL+ K + ++ PGS
Sbjct: 345 -GWPLDIR-----VGLIGSCTNSSYEDMGRSAA-VAKQALAHGLKCKS--QFTITPGSEQ 395
Query: 379 VTKYLLQSGLQKYLNEQGFHIVGYGCTTCIG--NSGDLDESVASTITDNDIVAAAVLSGN 436
+ + + G + L + G ++ C CIG + D+ + +TI V S N
Sbjct: 396 IRATIERDGYAQVLRDVGGIVLANACGPCIGQWDRKDIKKGEKNTI---------VTSYN 446
Query: 437 RNFEGR--VHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTKDGKSVYFKDIWPTT 494
RNF GR +P T A ++ SP +V A A+AGT+ + + + + T KDGK FK P
Sbjct: 447 RNFTGRNDANPETHA-FVTSPEIVTALAIAGTLKFNPETDFL-TGKDGKK--FKLEAPDA 502
Query: 495 EEI--AEVVQSSVLPDMFKSTYEAITKGNPTWNQLSVPASKLYSWDPNSTYIHEPPYFKD 552
+E+ AE D + TY+ K + P S+ + EP
Sbjct: 503 DELPRAEF-------DPGQDTYQHPPKDSSGQRVDVSPTSQRLQ-------LLEP----- 543
Query: 553 MTMDPPGAHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPTAKYLLERGVERRDFNSYGS 612
D ++D L+ TTDHIS AG P K+
Sbjct: 544 --FDKWDGKDLEDLQILIKVKGKCTTDHISAAG------PWLKF---------------- 579
Query: 613 RRGNDEVMARGTFANIRLVNKLLNGEVGPKT------VHVPTGEKLSVFDAAMKYKSAGH 666
RG NI N LL G + + + T E V D A YK G
Sbjct: 580 ---------RGHLDNIS--NNLLIGAINSENRKANSVRNAVTQEFGPVPDTARYYKQHGI 628
Query: 667 GTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGEDA 726
+++ YG GSSR+ A P LG +A+I KSF RIH +NL G++PL F + A
Sbjct: 629 RWVVIGDENYGEGSSREHRALEPRFLGGRAIITKSFARIHETNLKKQGLLPLTF--ADPA 686
Query: 727 DSLGLTGHERFSIDLPSKISEIRPGQDVTVTTDSGKSFTCTVRFD---TEVELAYFDHGG 783
D + ++ +I + + PG+ +T T+ + E ++ +F G
Sbjct: 687 DYNKIHPVDKLTI---QGLKDFAPGKPLTCIIKHPNGTQETILLNHTFNETQIEWFRAGS 743
Query: 784 IL 785
L
Sbjct: 744 AL 745
>pdb|1C96|A Chain A, S642a:citrate Complex Of Aconitase
Length = 753
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 210/744 (28%), Positives = 312/744 (41%), Gaps = 142/744 (19%)
Query: 19 VPVDLVIDHSVQVDVTRSENAVKANMELEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIV 78
VP + DH ++ + ++ +A N+E + FL + A + + PGSGI+
Sbjct: 92 VPSTIHCDHLIEAQLGGEKDLRRAK-----DINQEVYNFLA-TAGAKYGVGFWRPGSGII 145
Query: 79 HQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDXXXXXXXXXXXXXXXXXMLGQPMSM 138
HQ+ LE + G+L ++GTDSHT M G P +
Sbjct: 146 HQIILEN-----YAYPGVL----LIGTDSHTPNGGGLGGICIGVGGADAVDVMAGIPWEL 196
Query: 139 VLPGVVGFKLSGKLHNGVTATDLVLTVTQMLRKHGVVGKFVEFHGDGMGELSLADRATIA 198
P V+G KL+G L + D++L V +L G G VE+HG G+ +S ATI
Sbjct: 197 KCPKVIGVKLTGSLSGWTSPKDVILKVAGILTVKGGTGAIVEYHGPGVDSISCTGMATIC 256
Query: 199 NMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAMVEGYLRANKMFVDYNEPQQERVYSS 258
NM E GAT FP +H +YL TGR+D E F D+ P Y
Sbjct: 257 NMGAEIGATTSVFPYNHRMKKYLSKTGRADIANLADE--------FKDHLVPDPGCHYDQ 308
Query: 259 YLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKETQEKVVKFSF 318
+E+NL++++P I+GP P P+ E+ G KE
Sbjct: 309 VIEINLSELKPHINGPFTPDLAHPVAEV---------------GSVAEKE---------- 343
Query: 319 HGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGV 378
G P +++ + I SCTN+S + A VAK+A GL+ K + ++ PGS
Sbjct: 344 -GWPLDIR-----VGLIGSCTNSSYEDMGRSAA-VAKQALAHGLKCKS--QFTITPGSEQ 394
Query: 379 VTKYLLQSGLQKYLNEQGFHIVGYGCTTCIG--NSGDLDESVASTITDNDIVAAAVLSGN 436
+ + + G + L + G ++ C CIG + D+ + +TI V S N
Sbjct: 395 IRATIERDGYAQVLRDVGGIVLANACGPCIGQWDRKDIKKGEKNTI---------VTSYN 445
Query: 437 RNFEGR--VHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTKDGKSVYFKDIWPTT 494
RNF GR +P T A ++ SP +V A A+AGT+ + + + + T KDGK FK P
Sbjct: 446 RNFTGRNDANPETHA-FVTSPEIVTALAIAGTLKFNPETDFL-TGKDGKK--FKLEAPDA 501
Query: 495 EEI--AEVVQSSVLPDMFKSTYEAITKGNPTWNQLSVPASKLYSWDPNSTYIHEPPYFKD 552
+E+ AE D + TY+ K + P S+ + EP
Sbjct: 502 DELPRAEF-------DPGQDTYQHPPKDSSGQRVAVSPTSQRLQ-------LLEP----- 542
Query: 553 MTMDPPGAHGVKDAYCLLNFGDSITTDHISPAGSI-----HKDSPTAKYLLER-GVERRD 606
D ++D L+ TTDHIS AG H D+ + L+ +E R
Sbjct: 543 --FDKWDGKDLEDLQILIKVKGKCTTDHISAAGPWLKFRGHLDNISNNLLIGAINIENRK 600
Query: 607 FNSYGSRRGNDEVMARGTFANIRLVNKLLNGEVGPKTVHVPTGEKLSVFDAAMKYKSAGH 666
NS V + E GP V D A YK G
Sbjct: 601 ANS---------------------VRNAVTQEFGP------------VPDTARYYKQHGI 627
Query: 667 GTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGED- 725
+++ YG G+SR+ +A P LG +A+I KSF RIH +NL G++PL F D
Sbjct: 628 RWVVIGDENYGEGASREHSALEPRHLGGRAIITKSFARIHETNLKKQGLLPLTFADPADY 687
Query: 726 -----ADSLGLTGHERFSIDLPSK 744
D L + G + F+ P K
Sbjct: 688 NKIHPVDKLTIQGLKDFAPGKPLK 711
>pdb|1C97|A Chain A, S642a:isocitrate Complex Of Aconitase
pdb|1B0K|A Chain A, S642a:fluorocitrate Complex Of Aconitase
Length = 753
Score = 196 bits (497), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 210/744 (28%), Positives = 312/744 (41%), Gaps = 142/744 (19%)
Query: 19 VPVDLVIDHSVQVDVTRSENAVKANMELEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIV 78
VP + DH ++ + ++ +A N+E + FL + A + + PGSGI+
Sbjct: 92 VPSTIHCDHLIEAQLGGEKDLRRAK-----DINQEVYNFLA-TAGAKYGVGFWRPGSGII 145
Query: 79 HQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDXXXXXXXXXXXXXXXXXMLGQPMSM 138
HQ+ LE + G+L ++GTDSHT M G P +
Sbjct: 146 HQIILEN-----YAYPGVL----LIGTDSHTPNGGGLGGICIGVGGADAVDVMAGIPWEL 196
Query: 139 VLPGVVGFKLSGKLHNGVTATDLVLTVTQMLRKHGVVGKFVEFHGDGMGELSLADRATIA 198
P V+G KL+G L + D++L V +L G G VE+HG G+ +S ATI
Sbjct: 197 KCPKVIGVKLTGSLSGWTSPKDVILKVAGILTVKGGTGAIVEYHGPGVDSISCTGMATIC 256
Query: 199 NMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAMVEGYLRANKMFVDYNEPQQERVYSS 258
NM E GAT FP +H +YL TGR+D E F D+ P Y
Sbjct: 257 NMGAEIGATTSVFPYNHRMKKYLSKTGRADIANLADE--------FKDHLVPDPGCHYDQ 308
Query: 259 YLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKETQEKVVKFSF 318
+E+NL++++P I+GP P P+ E+ G KE
Sbjct: 309 VIEINLSELKPHINGPFTPDLAHPVAEV---------------GSVAEKE---------- 343
Query: 319 HGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGV 378
G P +++ + I SCTN+S + A VAK+A GL+ K + ++ PGS
Sbjct: 344 -GWPLDIR-----VGLIGSCTNSSYEDMGRSAA-VAKQALAHGLKCKS--QFTITPGSEQ 394
Query: 379 VTKYLLQSGLQKYLNEQGFHIVGYGCTTCIG--NSGDLDESVASTITDNDIVAAAVLSGN 436
+ + + G + L + G ++ C CIG + D+ + +TI V S N
Sbjct: 395 IRATIERDGYAQVLRDVGGIVLANACGPCIGQWDRKDIKKGEKNTI---------VTSYN 445
Query: 437 RNFEGR--VHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTKDGKSVYFKDIWPTT 494
RNF GR +P T A ++ SP +V A A+AGT+ + + + + T KDGK FK P
Sbjct: 446 RNFTGRNDANPETHA-FVTSPEIVTALAIAGTLKFNPETDFL-TGKDGKK--FKLEAPDA 501
Query: 495 EEI--AEVVQSSVLPDMFKSTYEAITKGNPTWNQLSVPASKLYSWDPNSTYIHEPPYFKD 552
+E+ AE D + TY+ K + P S+ + EP
Sbjct: 502 DELPRAEF-------DPGQDTYQHPPKDSSGQRVDVSPTSQRLQ-------LLEP----- 542
Query: 553 MTMDPPGAHGVKDAYCLLNFGDSITTDHISPAGSI-----HKDSPTAKYLLER-GVERRD 606
D ++D L+ TTDHIS AG H D+ + L+ +E R
Sbjct: 543 --FDKWDGKDLEDLQILIKVKGKCTTDHISAAGPWLKFRGHLDNISNNLLIGAINIENRK 600
Query: 607 FNSYGSRRGNDEVMARGTFANIRLVNKLLNGEVGPKTVHVPTGEKLSVFDAAMKYKSAGH 666
NS V + E GP V D A YK G
Sbjct: 601 ANS---------------------VRNAVTQEFGP------------VPDTARYYKQHGI 627
Query: 667 GTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGED- 725
+++ YG G+SR+ +A P LG +A+I KSF RIH +NL G++PL F D
Sbjct: 628 RWVVIGDENYGEGASREHSALEPRHLGGRAIITKSFARIHETNLKKQGLLPLTFADPADY 687
Query: 726 -----ADSLGLTGHERFSIDLPSK 744
D L + G + F+ P K
Sbjct: 688 NKIHPVDKLTIQGLKDFAPGKPLK 711
>pdb|1B0J|A Chain A, Crystal Structure Of Aconitase With Isocitrate
Length = 754
Score = 195 bits (496), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 210/744 (28%), Positives = 312/744 (41%), Gaps = 142/744 (19%)
Query: 19 VPVDLVIDHSVQVDVTRSENAVKANMELEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIV 78
VP + DH ++ + ++ +A N+E + FL + A + + PGSGI+
Sbjct: 93 VPSTIHCDHLIEAQLGGEKDLRRAK-----DINQEVYNFLA-TAGAKYGVGFWRPGSGII 146
Query: 79 HQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDXXXXXXXXXXXXXXXXXMLGQPMSM 138
HQ+ LE + G+L ++GTDSHT M G P +
Sbjct: 147 HQIILEN-----YAYPGVL----LIGTDSHTPNGGGLGGICIGVGGADAVDVMAGIPWEL 197
Query: 139 VLPGVVGFKLSGKLHNGVTATDLVLTVTQMLRKHGVVGKFVEFHGDGMGELSLADRATIA 198
P V+G KL+G L + D++L V +L G G VE+HG G+ +S ATI
Sbjct: 198 KCPKVIGVKLTGSLSGWTSPKDVILKVAGILTVKGGTGAIVEYHGPGVDSISCTGMATIC 257
Query: 199 NMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAMVEGYLRANKMFVDYNEPQQERVYSS 258
NM E GAT FP +H +YL TGR+D E F D+ P Y
Sbjct: 258 NMGAEIGATTSVFPYNHRMKKYLSKTGRADIANLADE--------FKDHLVPDPGCHYDQ 309
Query: 259 YLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKETQEKVVKFSF 318
+E+NL++++P I+GP P P+ E+ G KE
Sbjct: 310 VIEINLSELKPHINGPFTPDLAHPVAEV---------------GSVAEKE---------- 344
Query: 319 HGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGV 378
G P +++ + I SCTN+S + A VAK+A GL+ K + ++ PGS
Sbjct: 345 -GWPLDIR-----VGLIGSCTNSSYEDMGRSAA-VAKQALAHGLKCKS--QFTITPGSEQ 395
Query: 379 VTKYLLQSGLQKYLNEQGFHIVGYGCTTCIG--NSGDLDESVASTITDNDIVAAAVLSGN 436
+ + + G + L + G ++ C CIG + D+ + +TI V S N
Sbjct: 396 IRATIERDGYAQVLRDVGGIVLANACGPCIGQWDRKDIKKGEKNTI---------VTSYN 446
Query: 437 RNFEGR--VHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTKDGKSVYFKDIWPTT 494
RNF GR +P T A ++ SP +V A A+AGT+ + + + + T KDGK FK P
Sbjct: 447 RNFTGRNDANPETHA-FVTSPEIVTALAIAGTLKFNPETDFL-TGKDGKK--FKLEAPDA 502
Query: 495 EEI--AEVVQSSVLPDMFKSTYEAITKGNPTWNQLSVPASKLYSWDPNSTYIHEPPYFKD 552
+E+ AE D + TY+ K + P S+ + EP
Sbjct: 503 DELPRAEF-------DPGQDTYQHPPKDSSGQRVDVSPTSQRLQ-------LLEP----- 543
Query: 553 MTMDPPGAHGVKDAYCLLNFGDSITTDHISPAGSI-----HKDSPTAKYLLER-GVERRD 606
D ++D L+ TTDHIS AG H D+ + L+ +E R
Sbjct: 544 --FDKWDGKDLEDLQILIKVKGKCTTDHISAAGPWLKFRGHLDNISNNLLIGAINIENRK 601
Query: 607 FNSYGSRRGNDEVMARGTFANIRLVNKLLNGEVGPKTVHVPTGEKLSVFDAAMKYKSAGH 666
NS V + E GP V D A YK G
Sbjct: 602 ANS---------------------VRNAVTQEFGP------------VPDTARYYKQHGI 628
Query: 667 GTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGED- 725
+++ YG G+SR+ +A P LG +A+I KSF RIH +NL G++PL F D
Sbjct: 629 RWVVIGDENYGEGASREHSALEPRHLGGRAIITKSFARIHETNLKKQGLLPLTFADPADY 688
Query: 726 -----ADSLGLTGHERFSIDLPSK 744
D L + G + F+ P K
Sbjct: 689 NKIHPVDKLTIQGLKDFAPGKPLK 712
>pdb|1B0M|A Chain A, Aconitase R644q:fluorocitrate Complex
Length = 753
Score = 195 bits (495), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 210/744 (28%), Positives = 312/744 (41%), Gaps = 142/744 (19%)
Query: 19 VPVDLVIDHSVQVDVTRSENAVKANMELEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIV 78
VP + DH ++ + ++ +A N+E + FL + A + + PGSGI+
Sbjct: 92 VPSTIHCDHLIEAQLGGEKDLRRAK-----DINQEVYNFLA-TAGAKYGVGFWRPGSGII 145
Query: 79 HQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDXXXXXXXXXXXXXXXXXMLGQPMSM 138
HQ+ LE + G+L ++GTDSHT M G P +
Sbjct: 146 HQIILEN-----YAYPGVL----LIGTDSHTPNGGGLGGICIGVGGADAVDVMAGIPWEL 196
Query: 139 VLPGVVGFKLSGKLHNGVTATDLVLTVTQMLRKHGVVGKFVEFHGDGMGELSLADRATIA 198
P V+G KL+G L + D++L V +L G G VE+HG G+ +S ATI
Sbjct: 197 KCPKVIGVKLTGSLSGWTSPKDVILKVAGILTVKGGTGAIVEYHGPGVDSISCTGMATIC 256
Query: 199 NMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAMVEGYLRANKMFVDYNEPQQERVYSS 258
NM E GAT FP +H +YL TGR+D E F D+ P Y
Sbjct: 257 NMGAEIGATTSVFPYNHRMKKYLSKTGRADIANLADE--------FKDHLVPDPGCHYDQ 308
Query: 259 YLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKETQEKVVKFSF 318
+E+NL++++P I+GP P P+ E+ G KE
Sbjct: 309 VIEINLSELKPHINGPFTPDLAHPVAEV---------------GSVAEKE---------- 343
Query: 319 HGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGV 378
G P +++ + I SCTN+S + A VAK+A GL+ K + ++ PGS
Sbjct: 344 -GWPLDIR-----VGLIGSCTNSSYEDMGRSAA-VAKQALAHGLKCKS--QFTITPGSEQ 394
Query: 379 VTKYLLQSGLQKYLNEQGFHIVGYGCTTCIG--NSGDLDESVASTITDNDIVAAAVLSGN 436
+ + + G + L + G ++ C CIG + D+ + +TI V S N
Sbjct: 395 IRATIERDGYAQVLRDVGGIVLANACGPCIGQWDRKDIKKGEKNTI---------VTSYN 445
Query: 437 RNFEGR--VHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTKDGKSVYFKDIWPTT 494
RNF GR +P T A ++ SP +V A A+AGT+ + + + + T KDGK FK P
Sbjct: 446 RNFTGRNDANPETHA-FVTSPEIVTALAIAGTLKFNPETDFL-TGKDGKK--FKLEAPDA 501
Query: 495 EEI--AEVVQSSVLPDMFKSTYEAITKGNPTWNQLSVPASKLYSWDPNSTYIHEPPYFKD 552
+E+ AE D + TY+ K + P S+ + EP
Sbjct: 502 DELPRAEF-------DPGQDTYQHPPKDSSGQRVDVSPTSQRLQ-------LLEP----- 542
Query: 553 MTMDPPGAHGVKDAYCLLNFGDSITTDHISPAGSI-----HKDSPTAKYLLER-GVERRD 606
D ++D L+ TTDHIS AG H D+ + L+ +E R
Sbjct: 543 --FDKWDGKDLEDLQILIKVKGKCTTDHISAAGPWLKFRGHLDNISNNLLIGAINIENRK 600
Query: 607 FNSYGSRRGNDEVMARGTFANIRLVNKLLNGEVGPKTVHVPTGEKLSVFDAAMKYKSAGH 666
NS V + E GP V D A YK G
Sbjct: 601 ANS---------------------VRNAVTQEFGP------------VPDTARYYKQHGI 627
Query: 667 GTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGED- 725
+++ YG GSS++ +A P LG +A+I KSF RIH +NL G++PL F D
Sbjct: 628 RWVVIGDENYGEGSSQEHSALEPRHLGGRAIITKSFARIHETNLKKQGLLPLTFADPADY 687
Query: 726 -----ADSLGLTGHERFSIDLPSK 744
D L + G + F+ P K
Sbjct: 688 NKIHPVDKLTIQGLKDFAPGKPLK 711
>pdb|2PKP|A Chain A, Crystal Structure Of 3-Isopropylmalate Dehydratase (Leud)
From Methhanocaldococcus Jannaschii Dsm2661 (Mj1271)
Length = 170
Score = 55.8 bits (133), Expect = 9e-08, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 60/134 (44%), Gaps = 17/134 (12%)
Query: 662 KSAGHGTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFK 721
K G +I+AG +G GSSR+ A G+KAVIAKSF RI N + +G+IP+
Sbjct: 47 KKVKEGDVIVAGENFGCGSSREQAVIAIKYCGIKAVIAKSFARIFYRNAINVGLIPIIAN 106
Query: 722 AGEDADSLGLTGHERFSIDLPSKISEIRPGQDVTVTTDSGKSFTCTVRFDTEVELAYFDH 781
E D I EI ++ V T+ K+ C E E+
Sbjct: 107 TDEIKD---------------GDIVEIDLDKEEIVITNKNKTIKCETPKGLEREI--LAA 149
Query: 782 GGILPFVIRNLIKQ 795
GG++ ++ + + Q
Sbjct: 150 GGLVNYLKKRKLIQ 163
>pdb|1V7L|A Chain A, Structure Of 3-Isopropylmalate Isomerase Small Subunit
From Pyrococcus Horikoshii
pdb|1V7L|B Chain B, Structure Of 3-Isopropylmalate Isomerase Small Subunit
From Pyrococcus Horikoshii
Length = 163
Score = 45.8 bits (107), Expect = 9e-05, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 8/88 (9%)
Query: 667 GTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGEDA 726
G +++AG +G GSSR+ AA LG+ VIA+SF RI N + +G IPL E
Sbjct: 52 GDVVVAGKNFGIGSSRESAALALKALGIAGVIAESFGRIFYRNAINIG-IPLLLGKTE-- 108
Query: 727 DSLGLTGHERFSIDLPSKISEIRPGQDV 754
GL + +++ + E+R G ++
Sbjct: 109 ---GLKDGDLVTVNWET--GEVRKGDEI 131
>pdb|2HCU|A Chain A, Crystal Structure Of Smu.1381 (Or Leud) From Streptococcus
Mutans
Length = 213
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 20/116 (17%)
Query: 660 KYKSAGHGTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLC 719
+Y+ A +I++ G +G+GSSR+ AA G K ++A SF IH +N + GI+P+
Sbjct: 82 EYREA---SILITGDNFGAGSSREHAAWALADYGFKVIVAGSFGDIHYNNDLNNGILPII 138
Query: 720 FKAGEDADSLGLTGHERFSIDLPSKISEIRPGQDVTVTTDSGKSFTCTVRFDTEVE 775
++ K+++++P +VTV K ++ F +++
Sbjct: 139 QPK-----------------EVRDKLAKLKPTDEVTVNLFEQKIYSPVGDFSFDID 177
>pdb|3VBA|A Chain A, Crystal Structure Of Methanogen 3-Isopropylmalate
Isomerase Small Subunit
pdb|3VBA|B Chain B, Crystal Structure Of Methanogen 3-Isopropylmalate
Isomerase Small Subunit
pdb|3VBA|C Chain C, Crystal Structure Of Methanogen 3-Isopropylmalate
Isomerase Small Subunit
pdb|3VBA|D Chain D, Crystal Structure Of Methanogen 3-Isopropylmalate
Isomerase Small Subunit
pdb|3VBA|E Chain E, Crystal Structure Of Methanogen 3-Isopropylmalate
Isomerase Small Subunit
pdb|3VBA|F Chain F, Crystal Structure Of Methanogen 3-Isopropylmalate
Isomerase Small Subunit
Length = 176
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%)
Query: 662 KSAGHGTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGI 715
K G II+ G +G GSSR+ A G G+ VIA+SF RI N + +G+
Sbjct: 49 KKVKPGDIIVGGKNFGCGSSREHAPLGLKGAGISCVIAESFARIFYRNAINVGL 102
>pdb|3Q3W|A Chain A, Isopropylmalate Isomerase Small Subunit From Campylobacter
Jejuni.
pdb|3Q3W|B Chain B, Isopropylmalate Isomerase Small Subunit From Campylobacter
Jejuni
Length = 203
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 38/63 (60%)
Query: 656 DAAMKYKSAGHGTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGI 715
D + K + +I+++ +GSGSSR+ A + G++A+IA SF I ++N +G G+
Sbjct: 62 DFNLNKKEYQNSSILVSFENFGSGSSREHAPWALVDYGIRAIIAPSFADIFKNNALGNGL 121
Query: 716 IPL 718
+ +
Sbjct: 122 LTI 124
>pdb|3H5H|A Chain A, Leud_1-186 Small Subunit Of Isopropylmalate Isomerase
(Rv2987c) From Mycobacterium Tuberculosis
pdb|3H5H|B Chain B, Leud_1-186 Small Subunit Of Isopropylmalate Isomerase
(Rv2987c) From Mycobacterium Tuberculosis
Length = 189
Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 14/89 (15%)
Query: 667 GTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGEDA 726
G++++AG ++G+GSSR+ A M G + VI+ F I R N G++ A E A
Sbjct: 65 GSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLL-----AAEVA 119
Query: 727 DSLGLTGHERFSIDLPSKISEIRPGQDVT 755
++L K+ E PG ++T
Sbjct: 120 QD---------DVELLWKLIEQSPGLEIT 139
>pdb|1L5J|A Chain A, Crystal Structure Of E. Coli Aconitase B.
pdb|1L5J|B Chain B, Crystal Structure Of E. Coli Aconitase B
Length = 865
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 84/385 (21%), Positives = 136/385 (35%), Gaps = 98/385 (25%)
Query: 73 PGSGIVHQVNLEYLGRVVFNTNGMLYPDSV-VGTDSHTTMIDXXXXXXXXXXXXXXXXXM 131
PG G++H +L R ML PD+V G DSHT
Sbjct: 474 PGDGVIHS----WLNR-------MLLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAATG 522
Query: 132 LGQPMSMVLPGVVGFKLSGKLHNGVTATDLV------------LTVTQMLRKHGVVGKFV 179
+ M + +P V + GK+ G+T DLV LTV + +K+ G+ +
Sbjct: 523 V---MPLDMPESVLVRFKGKMQPGITLRDLVHAIPLYAIKQGLLTVEKKGKKNIFSGRIL 579
Query: 180 EFHGDGMGELSLADRATIANMSPEYGAT-----------MGFFPVDHVTLQYLKLTGRSD 228
E +G+ +L + + + S E A + + + V L+++ G D
Sbjct: 580 EI--EGLPDLKVEQAFELTDASAERSAAGCTIKLNKEPIIEYLNSNIVLLKWMIAEGYGD 637
Query: 229 -----ETVAMVEGYLRANKMFVDYNEPQQERVYSSYLELNLADV-EPCISGPKRPHDRVP 282
+ +E +L ++ + + V ++++LAD+ EP + P P D P
Sbjct: 638 RRTLERRIQGMEKWLANPELLEADADAEYAAV----IDIDLADIKEPILCAPNDPDDARP 693
Query: 283 LKEMKADWHSCLDNKVGFKGFAVPKETQEKVVKFSFHGQPAELKHGSVVIAAITSCTNTS 342
L AV E ++V I SC
Sbjct: 694 LS-------------------AVQGEKIDEVF--------------------IGSCMTNI 714
Query: 343 NPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGY 402
G L A K L + WV AP + + L + G + G I
Sbjct: 715 GHFRAAGKLLDAHKG---QLPTRLWV----APPTRMDAAQLTEEGYYSVFGKSGARIEIP 767
Query: 403 GCTTCIGNSGDLDE--SVASTITDN 425
GC+ C+GN + + +V ST T N
Sbjct: 768 GCSLCMGNQARVADGATVVSTSTRN 792
>pdb|3H5J|A Chain A, Leud_1-168 Small Subunit Of Isopropylmalate Isomerase
(Rv2987c) From Mycobacterium Tuberculosis
pdb|3H5J|B Chain B, Leud_1-168 Small Subunit Of Isopropylmalate Isomerase
(Rv2987c) From Mycobacterium Tuberculosis
Length = 171
Score = 38.9 bits (89), Expect = 0.012, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 14/89 (15%)
Query: 667 GTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGEDA 726
G++++AG ++G+GSSR+ A M G + VI+ F I R N G++ A E A
Sbjct: 65 GSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLL-----AAEVA 119
Query: 727 DSLGLTGHERFSIDLPSKISEIRPGQDVT 755
++L K+ E PG ++T
Sbjct: 120 QD---------DVELLWKLIEQSPGLEIT 139
>pdb|3H5E|A Chain A, Leud_1-156 Small Subunit Of Isopropylmalate Isomerase
(rv2987c) From Mycobacterium Tuberculosis
pdb|3H5E|B Chain B, Leud_1-156 Small Subunit Of Isopropylmalate Isomerase
(rv2987c) From Mycobacterium Tuberculosis
Length = 159
Score = 37.7 bits (86), Expect = 0.023, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 667 GTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGII 716
G++++AG ++G+GSSR+ A M G + VI+ F I R N G++
Sbjct: 65 GSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLL 114
>pdb|3O8L|A Chain A, Structure Of Phosphofructokinase From Rabbit Skeletal
Muscle
pdb|3O8L|B Chain B, Structure Of Phosphofructokinase From Rabbit Skeletal
Muscle
pdb|3O8N|A Chain A, Structure Of Phosphofructokinase From Rabbit Skeletal
Muscle
pdb|3O8N|B Chain B, Structure Of Phosphofructokinase From Rabbit Skeletal
Muscle
Length = 762
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 15/117 (12%)
Query: 661 YKSAGHGTIILAGAEYGSGSSRDWAAKGPMLLGVKAVI-AKSFERIHRSNLVGMGIIPLC 719
++ G I AG Y G W +G LG K + KSFE+I +N+ I L
Sbjct: 440 FEGPAKGQIEEAGWSYVGG----WTGQGGSKLGSKRTLPKKSFEQIS-ANITKFNIQGLV 494
Query: 720 FKAGEDADSLGLT---GHERFS------IDLPSKISEIRPGQDVTVTTDSGKSFTCT 767
G +A + GL G ++F + +P+ +S PG D +V D+ + CT
Sbjct: 495 IIGGFEAYTGGLELMEGRKQFDELCIPFVVIPATVSNNVPGSDFSVGADTALNTICT 551
>pdb|1PW4|A Chain A, Crystal Structure Of The Glycerol-3-Phosphate Transporter
From E.Coli
Length = 451
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 337 SCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLA 373
S ++ SNP V L AGL+ A L + PW +S+A
Sbjct: 84 SVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIA 120
>pdb|1THT|A Chain A, Structure Of A Myristoyl-Acp-Specific Thioesterase From
Vibrio Harveyi
pdb|1THT|B Chain B, Structure Of A Myristoyl-Acp-Specific Thioesterase From
Vibrio Harveyi
Length = 305
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 366 PWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIG-NSGDLDESVAST 421
P+ ++ SG + +GL +YL+ GFH+ Y +G +SG +DE +T
Sbjct: 32 PFKNNTILIASGFARRMDHFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSIDEFTMTT 88
>pdb|1L1L|A Chain A, Crystal Structure Of B-12 Dependent (Class Ii)
Ribonucleotide Reductase
pdb|1L1L|B Chain B, Crystal Structure Of B-12 Dependent (Class Ii)
Ribonucleotide Reductase
pdb|1L1L|C Chain C, Crystal Structure Of B-12 Dependent (Class Ii)
Ribonucleotide Reductase
pdb|1L1L|D Chain D, Crystal Structure Of B-12 Dependent (Class Ii)
Ribonucleotide Reductase
Length = 739
Score = 29.6 bits (65), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 16/81 (19%)
Query: 235 EGYLRANKMFVDYNEPQQERVYSSYLELNLADVEP----------CISGPKRPHDRVPLK 284
EG++ AN + +D + Q L L+L+D+ P SGP +PL
Sbjct: 225 EGWVLANALLIDLHFAQTNPDRKQKLILDLSDIRPYGAEIHGFGGTASGP------MPLI 278
Query: 285 EMKADWHSCLDNKVGFKGFAV 305
M D + L+NK G + AV
Sbjct: 279 SMLLDVNEVLNNKAGGRLTAV 299
>pdb|3H4P|A Chain A, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
pdb|3H4P|B Chain B, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
pdb|3H4P|C Chain C, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
pdb|3H4P|D Chain D, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
pdb|3H4P|E Chain E, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
pdb|3H4P|F Chain F, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
pdb|3H4P|G Chain G, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
pdb|3H4P|H Chain H, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
pdb|3H4P|I Chain I, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
pdb|3H4P|J Chain J, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
pdb|3H4P|K Chain K, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
pdb|3H4P|L Chain L, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
pdb|3H4P|M Chain M, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
pdb|3H4P|N Chain N, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
Length = 264
Score = 29.3 bits (64), Expect = 9.9, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 15/128 (11%)
Query: 673 GAEYGSGSSRDWAAKGPMLLGV--KAVIAKSFERIHRSNLVGMGIIPLCFKAGED--ADS 728
G Y +R+ +G +G+ K + + +R S LV + I F+ + A +
Sbjct: 23 GRLYQVEYAREAVRRGTTAIGIACKDGVVLAVDRRITSKLVKIRSIEKIFQIDDHVAAAT 82
Query: 729 LGLTGHERFSID---LPSKISEIRPGQDVTVTTDSGKSFTCTVRFDTEVELAYFDHGGIL 785
GL R ID L ++I + G+++++ + K C +++ AY HGG+
Sbjct: 83 SGLVADARVLIDRARLEAQIYRLTYGEEISIEMLAKK--IC------DIKQAYTQHGGVR 134
Query: 786 PFVIRNLI 793
PF + LI
Sbjct: 135 PFGVSLLI 142
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.135 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,677,523
Number of Sequences: 62578
Number of extensions: 1089070
Number of successful extensions: 2492
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 2412
Number of HSP's gapped (non-prelim): 49
length of query: 795
length of database: 14,973,337
effective HSP length: 107
effective length of query: 688
effective length of database: 8,277,491
effective search space: 5694913808
effective search space used: 5694913808
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)